Chordata ANCESTRAL SPECIES ENSGT00940000155620 #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000155620 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155620 #22 Euteleostomi ANCESTRAL SPECIES 303 ENSGT00940000159463 #7 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00950000182907.a.a ENSGT00530000063760.b ENSGT00550000075028 ENSGT00940000162345 ENSGT00940000155620 #22 ENSGT00390000006100 #21 ENSGT00940000158230 #20 ENSGT00940000165149 ENSGT00940000157244 #18 Sarcopterygii ANCESTRAL SPECIES 49 ENSGT00950000183076.a.b.b.a.b ENSGT00730000111346 ENSGT00390000007227.a ENSGT00390000008765 ENSGT00940000155620 #22 ENSGT00390000006100 #21 ENSGT00940000158230 #20 ENSGT00940000165149 ENSGT00940000161732 #19 ENSGT00940000157244 #18 ENSGT00550000074827 ENSGT00940000157796 ENSGT00940000155399 #16 ENSGT00940000162656 #15 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00390000006479 Tetrapoda ANCESTRAL SPECIES 41 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 Amniota ANCESTRAL SPECIES 28 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 Mammalia ANCESTRAL SPECIES 25 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Theria ANCESTRAL SPECIES 3 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Eutheria ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Glires ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Rodentia ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Rodentia_B ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Myomorpha ANCESTRAL SPECIES 12 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Muroidea ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Upper Galilee mountains blind mole rat MODERN SPECIES 497 Mef2d (ENSNGAG00000016036) #7 Rhbg (ENSNGAG00000019322) #8 Cct3 (ENSNGAG00000016875) #9 Glmp (ENSNGAG00000019347) #10 Tmem79 (ENSNGAG00000020294) #11 Smg5 (ENSNGAG00000020706) #12 Paqr6 (ENSNGAG00000000673) #13 ENSNGAG00000001625 #14 Pmf1 (ENSNGAG00000007750) #15 Slc25a44 (ENSNGAG00000010575) #16 Sema4a (ENSNGAG00000012750) #17 Lmna (ENSNGAG00000017368) #18 Mex3a (ENSNGAG00000019587) #19 Rab25 (ENSNGAG00000019999) #20 Lamtor2 (ENSNGAG00000020249) #21 Ubqln4 (ENSNGAG00000020831) #22 Ssr2 (ENSNGAG00000002859) #23 ENSNGAG00000009107 #24 ENSNGAG00000011350 #25 Khdc4 (ENSNGAG00000012421) #26 Rit1 (ENSNGAG00000013104) #27 Syt11 (ENSNGAG00000013529) #28 Gon4l (ENSNGAG00000020844) #29 Msto1 (ENSNGAG00000022769) #30 Dap3 (ENSNGAG00000014173) #31 Ash1l (ENSNGAG00000021986) #32 Rusc1 (ENSNGAG00000008260) #33 Pklr (ENSNGAG00000019876) #34 Hcn3 (ENSNGAG00000021908) #35 Clk2 (ENSNGAG00000022518) #36 Scamp3 (ENSNGAG00000001034) #37 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Cricetidae ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224.x #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Cricetinae ANCESTRAL SPECIES 13 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224.x #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Golden Hamster MODERN SPECIES 714 Iqgap3 (ENSMAUG00000008455) Mef2d (ENSMAUG00000016452) #7 Rhbg (ENSMAUG00000009341) #8 Tsacc (ENSMAUG00000016723) ENSMAUG00000014449 #9 Tmem79 (ENSMAUG00000014791) #11 Smg5 (ENSMAUG00000010381) #12 Paqr6 (ENSMAUG00000010297) #13 ENSMAUG00000015288 #14 Pmf1 (ENSMAUG00000019629) #15 Slc25a44 (ENSMAUG00000021047) #16 ENSMAUG00000017061 #17 Lmna (ENSMAUG00000012838) #18 Mex3a (ENSMAUG00000012601) #19 Lamtor2 (ENSMAUG00000000547) #21 Ubqln4 (ENSMAUG00000007686) #22 Ssr2 (ENSMAUG00000021161) #23 ENSMAUG00000019940 #25 ENSMAUG00000013645 #25 Khdc4 (ENSMAUG00000019676) #26 Rit1 (ENSMAUG00000000572) #27 ENSMAUG00000013419 #28 ENSMAUG00000000631 #29 Msto1 (ENSMAUG00000020345) #30 Ash1l (ENSMAUG00000000702) #32 ENSMAUG00000017088 #33 Fdps (ENSMAUG00000020872) Pklr (ENSMAUG00000012808) #34 Hcn3 (ENSMAUG00000017469) #35 Clk2 (ENSMAUG00000016789) #36 Scamp3 (ENSMAUG00000010273) #37 Chinese hamster chok1gshd MODERN SPECIES 352 Rhbg (ENSCGRG00001000730) #8 Tsacc (ENSCGRG00001019825) Cct3 (ENSCGRG00001015935) #9 Glmp (ENSCGRG00001007094) #10 Tmem79 (ENSCGRG00001024551) #11 Smg5 (ENSCGRG00001006336) #12 Paqr6 (ENSCGRG00001016796) #13 ENSCGRG00001014532 #14 Pmf1 (ENSCGRG00001010918) #15 Slc25a44 (ENSCGRG00001021651) #16 Sema4a (ENSCGRG00001020918) #17 Lmna (ENSCGRG00001003129) #18 Mex3a (ENSCGRG00001000412) #19 Rab25 (ENSCGRG00001017341) #20 Lamtor2 (ENSCGRG00001008748) #21 Ubqln4 (ENSCGRG00001019653) #22 Ssr2 (ENSCGRG00001006822) #23 Arhgef2 (ENSCGRG00001006987) #25 Rxfp4 (ENSCGRG00001002374) Khdc4 (ENSCGRG00001012564) #26 Rit1 (ENSCGRG00001004542) #27 Syt11 (ENSCGRG00001023824) #28 Gon4l (ENSCGRG00001023253) #29 Msto1 (ENSCGRG00001015681) #30 Dap3 (ENSCGRG00001022521) #31 Ash1l (ENSCGRG00001011192) #32 Rusc1 (ENSCGRG00001009459) #33 Fdps (ENSCGRG00001025003) ENSCGRG00001023534 Pklr (ENSCGRG00001023372) #34 Hcn3 (ENSCGRG00001011318) #35 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224.x #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Prairie vole DUPLICATION Prairie vole DUPLICATION Prairie vole MODERN SPECIES 8 ENSMOCG00000022002 Tsacc (ENSMOCG00000013419) Cct3 (ENSMOCG00000010144) #9 Glmp (ENSMOCG00000009096) #10 Tmem79 (ENSMOCG00000017414) #11 Smg5 (ENSMOCG00000016590) #12 Paqr6 (ENSMOCG00000006437) #13 ENSMOCG00000019680 #14 ENSMOCG00000018426 #15 Slc25a44 (ENSMOCG00000014671) #16 Sema4a (ENSMOCG00000022467) #17 Lmna (ENSMOCG00000011854) #18 Mex3a (ENSMOCG00000017881) #19 Rab25 (ENSMOCG00000010953) #20 Lamtor2 (ENSMOCG00000018988) #21 ENSMOCG00000013140 #22 Ssr2 (ENSMOCG00000001890) #23 ENSMOCG00000020991 #25 ENSMOCG00000019234 #25 ENSMOCG00000007816 #26 Prairie vole MODERN SPECIES 360 Ptchd1 (ENSMOCG00000020483) Prdx4 (ENSMOCG00000014602) ENSMOCG00000002108 Sat1 (ENSMOCG00000012276) ENSMOCG00000012729 ENSMOCG00000021049 ENSMOCG00000013763 Spin2c (ENSMOCG00000001348) ENSMOCG00000003551 Kctd12b (ENSMOCG00000015728) Klf8 (ENSMOCG00000000163) ENSMOCG00000002121 ENSMOCG00000013664 Rragb (ENSMOCG00000010568) Mageh1 (ENSMOCG00000010509) ENSMOCG00000010679 #22 Tmem29 (ENSMOCG00000020676) ENSMOCG00000021282 Alas2 (ENSMOCG00000021931) Apex2 (ENSMOCG00000004339) Pfkfb1 (ENSMOCG00000017052) ENSMOCG00000017394 Maged2 (ENSMOCG00000013159) Gnl3l (ENSMOCG00000021622) Fgd1 (ENSMOCG00000006370) Tsr2 (ENSMOCG00000006662) Wnk3 (ENSMOCG00000005941) Fam120c (ENSMOCG00000019667) Phf8 (ENSMOCG00000014989) Huwe1 (ENSMOCG00000009594) ENSMOCG00000000414 Prairie vole MODERN SPECIES 5 Ticam2 (ENSMOCG00000002517) Fem1c (ENSMOCG00000009368) Ccdc112 (ENSMOCG00000014847) Pggt1b (ENSMOCG00000020848) Trim36 (ENSMOCG00000005907) ENSMOCG00000000243 Kcnn2 (ENSMOCG00000021123) Ythdc2 (ENSMOCG00000011740) Mcc (ENSMOCG00000013709) Dcp2 (ENSMOCG00000014965) Myot (ENSMOCG00000002496) Gm10267 (ENSMOCG00000021096) Gm37797 (ENSMOCG00000014585) Spink12 (ENSMOCG00000003286) Spink6 (ENSMOCG00000022042) ENSMOCG00000016974 #22 Spink14 (ENSMOCG00000003998) Spink5 (ENSMOCG00000015103) Gm94 (ENSMOCG00000021778) Scgb3a2 (ENSMOCG00000004730) Spink1 (ENSMOCG00000020829) ENSMOCG00000011603 Jakmip2 (ENSMOCG00000020018) ENSMOCG00000019124 Stk32a (ENSMOCG00000013476) Ppp2r2b (ENSMOCG00000011221) Gpr151 (ENSMOCG00000010704) Tcerg1 (ENSMOCG00000021988) Pou4f3 (ENSMOCG00000014304) Rbm27 (ENSMOCG00000019479) Lars (ENSMOCG00000002092) Northern American deer mouse MODERN SPECIES 19 Rhbg (ENSPEMG00000011996) #8 Tsacc (ENSPEMG00000014593) Cct3 (ENSPEMG00000015732) #9 Glmp (ENSPEMG00000013529) #10 Tmem79 (ENSPEMG00000007739) #11 Smg5 (ENSPEMG00000001819) #12 Paqr6 (ENSPEMG00000002777) #13 ENSPEMG00000025586 #14 Pmf1 (ENSPEMG00000012625) #15 Slc25a44 (ENSPEMG00000013362) #16 Sema4a (ENSPEMG00000015516) #17 Lmna (ENSPEMG00000015821) #18 Mex3a (ENSPEMG00000019014) #19 Rab25 (ENSPEMG00000007548) #20 Lamtor2 (ENSPEMG00000009818) #21 Ubqln4 (ENSPEMG00000016759) #22 Ssr2 (ENSPEMG00000012464) #23 Arhgef2 (ENSPEMG00000002997) #25 Rxfp4 (ENSPEMG00000011662) Khdc4 (ENSPEMG00000007794) #26 Rit1 (ENSPEMG00000030433) #27 Syt11 (ENSPEMG00000003809) #28 Gon4l (ENSPEMG00000017252) #29 Msto1 (ENSPEMG00000016178) #30 ENSPEMG00000019185 #31 Ash1l (ENSPEMG00000006789) #32 Rusc1 (ENSPEMG00000018232) #33 Fdps (ENSPEMG00000030569) Pklr (ENSPEMG00000010915) #34 Hcn3 (ENSPEMG00000009033) #35 Clk2 (ENSPEMG00000012240) #36 Murinae ANCESTRAL SPECIES 5 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b.u #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Mus ANCESTRAL SPECIES 7 ENSGT00950000182844.b.b.a.b #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b.v #33 ENSGT00900000141033.b.b.u #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Mus_A ANCESTRAL SPECIES 9 ENSGT00950000182844.b.b.a.b #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131.e #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b.v #33 ENSGT00900000141033.b.b.u #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Mus_B ANCESTRAL SPECIES 8 ENSGT00950000182844.b.b.a.b #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131.e #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b.v #33 ENSGT00900000141033.b.b.u #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Mouse MODERN SPECIES 12 Cct3 (ENSMUSG00000001416) #9 Glmp (ENSMUSG00000001418) #10 Tmem79 (ENSMUSG00000001420) #11 Smg5 (ENSMUSG00000001415) #12 Paqr6 (ENSMUSG00000041423) #13 Bglap3 (ENSMUSG00000074489) #14 Bglap2 (ENSMUSG00000074486) #14 Bglap (ENSMUSG00000074483) #14 Pmf1 (ENSMUSG00000028066) #15 Slc25a44 (ENSMUSG00000050144) #16 Sema4a (ENSMUSG00000028064) #17 Lmna (ENSMUSG00000028063) #18 Mex3a (ENSMUSG00000074480) #19 Rab25 (ENSMUSG00000008601) #20 Lamtor2 (ENSMUSG00000028062) #21 Ubqln4 (ENSMUSG00000008604) #22 Ssr2 (ENSMUSG00000041355) #23 Arhgef2 (ENSMUSG00000028059) #25 Rxfp4 (ENSMUSG00000049741) Khdc4 (ENSMUSG00000028060) #26 Rit1 (ENSMUSG00000028057) #27 Syt11 (ENSMUSG00000068923) #28 Gon4l (ENSMUSG00000054199) #29 Msto1 (ENSMUSG00000068922) #30 Dap3 (ENSMUSG00000068921) #31 Ash1l (ENSMUSG00000028053) #32 Rusc1 (ENSMUSG00000041263) #33 Fdps (ENSMUSG00000059743) Pklr (ENSMUSG00000041237) #34 Hcn3 (ENSMUSG00000028051) #35 Clk2 (ENSMUSG00000068917) #36 Mus_C ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a.b #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131.e #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b.v #33 ENSGT00900000141033.b.b.u #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Steppe mouse MODERN SPECIES 2494 ENSMSIG00000029349 Cct3 (ENSMSIG00000029307) #9 Glmp (ENSMSIG00000029280) #10 Tmem79 (ENSMSIG00000029273) #11 Smg5 (ENSMSIG00000029250) #12 ENSMSIG00000029245 #13 ENSMSIG00000029238 #14 Pmf1 (ENSMSIG00000029235) #15 Slc25a44 (ENSMSIG00000029225) #16 ENSMSIG00000029223 Sema4a (ENSMSIG00000029207) #17 Lmna (ENSMSIG00000029196) #18 ENSMSIG00000029193 #19 Rab25 (ENSMSIG00000029192) #20 Lamtor2 (ENSMSIG00000029190) #21 Ubqln4 (ENSMSIG00000029187) #22 Ssr2 (ENSMSIG00000029173) #23 Arhgef2 (ENSMSIG00000028473) #25 ENSMSIG00000028469 Khdc4 (ENSMSIG00000028451) #26 Rit1 (ENSMSIG00000028448) #27 Syt11 (ENSMSIG00000028436) #28 spretus MODERN SPECIES 12 Cct3 (MGP_SPRETEiJ_G0026101) #9 Glmp (MGP_SPRETEiJ_G0026102) #10 Tmem79 (MGP_SPRETEiJ_G0026103) #11 Smg5 (MGP_SPRETEiJ_G0026104) #12 Paqr6 (MGP_SPRETEiJ_G0026105) #13 MGP_SPRETEiJ_G0026106 #14 MGP_SPRETEiJ_G0026108 #14 MGP_SPRETEiJ_G0026107 #14 Pmf1 (MGP_SPRETEiJ_G0026109) #15 Slc25a44 (MGP_SPRETEiJ_G0026110) #16 Sema4a (MGP_SPRETEiJ_G0026111) #17 Lmna (MGP_SPRETEiJ_G0026112) #18 MGP_SPRETEiJ_G0026113 #19 Rab25 (MGP_SPRETEiJ_G0026114) #20 Lamtor2 (MGP_SPRETEiJ_G0026115) #21 Ubqln4 (MGP_SPRETEiJ_G0026116) #22 Ssr2 (MGP_SPRETEiJ_G0026117) #23 Arhgef2 (MGP_SPRETEiJ_G0026118) #25 Rxfp4 (MGP_SPRETEiJ_G0026119) Khdc4 (MGP_SPRETEiJ_G0026120) #26 Rit1 (MGP_SPRETEiJ_G0026121) #27 Syt11 (MGP_SPRETEiJ_G0026122) #28 Gon4l (MGP_SPRETEiJ_G0026123) #29 Msto1 (MGP_SPRETEiJ_G0026124) #30 Dap3 (MGP_SPRETEiJ_G0026125) #31 Ash1l (MGP_SPRETEiJ_G0026126) #32 MGP_SPRETEiJ_G0026127 #33 Rusc1 (MGP_SPRETEiJ_G0026128) #33 Fdps (MGP_SPRETEiJ_G0026129) Pklr (MGP_SPRETEiJ_G0026130) #34 Hcn3 (MGP_SPRETEiJ_G0026131) #35 Ryukyu mouse MODERN SPECIES 12 MGP_CAROLIEiJ_G0025158 #8 Tsacc (MGP_CAROLIEiJ_G0025159) Cct3 (MGP_CAROLIEiJ_G0025160) #9 Glmp (MGP_CAROLIEiJ_G0025161) #10 Tmem79 (MGP_CAROLIEiJ_G0025162) #11 Smg5 (MGP_CAROLIEiJ_G0025163) #12 Paqr6 (MGP_CAROLIEiJ_G0025164) #13 MGP_CAROLIEiJ_G0025165 #14 Pmf1 (MGP_CAROLIEiJ_G0025166) #15 Slc25a44 (MGP_CAROLIEiJ_G0025167) #16 Sema4a (MGP_CAROLIEiJ_G0025168) #17 Lmna (MGP_CAROLIEiJ_G0025169) #18 Mex3a (MGP_CAROLIEiJ_G0025170) #19 Rab25 (MGP_CAROLIEiJ_G0025171) #20 Lamtor2 (MGP_CAROLIEiJ_G0025172) #21 Ubqln4 (MGP_CAROLIEiJ_G0025173) #22 Ssr2 (MGP_CAROLIEiJ_G0025174) #23 Arhgef2 (MGP_CAROLIEiJ_G0025175) #25 Rxfp4 (MGP_CAROLIEiJ_G0025176) Khdc4 (MGP_CAROLIEiJ_G0025177) #26 Rit1 (MGP_CAROLIEiJ_G0025178) #27 Syt11 (MGP_CAROLIEiJ_G0025179) #28 MGP_CAROLIEiJ_G0025180 #29 Msto1 (MGP_CAROLIEiJ_G0025181) #30 Dap3 (MGP_CAROLIEiJ_G0025182) #31 Ash1l (MGP_CAROLIEiJ_G0025183) #32 MGP_CAROLIEiJ_G0025184 #33 Rusc1 (MGP_CAROLIEiJ_G0025185) #33 Fdps (MGP_CAROLIEiJ_G0025186) Pklr (MGP_CAROLIEiJ_G0025187) #34 Hcn3 (MGP_CAROLIEiJ_G0025188) #35 Shrew mouse MODERN SPECIES 17 Tsacc (MGP_PahariEiJ_G0026602) MGP_PahariEiJ_G0026603 #9 Glmp (MGP_PahariEiJ_G0026604) #10 Tmem79 (MGP_PahariEiJ_G0026605) #11 Smg5 (MGP_PahariEiJ_G0026606) #12 Paqr6 (MGP_PahariEiJ_G0026607) #13 MGP_PahariEiJ_G0026610 #14 MGP_PahariEiJ_G0026609 #14 Pmf1 (MGP_PahariEiJ_G0026611) #15 Slc25a44 (MGP_PahariEiJ_G0026612) #16 Sema4a (MGP_PahariEiJ_G0026613) #17 Lmna (MGP_PahariEiJ_G0026614) #18 Mex3a (MGP_PahariEiJ_G0026615) #19 Rab25 (MGP_PahariEiJ_G0026616) #20 Lamtor2 (MGP_PahariEiJ_G0026617) #21 Ubqln4 (MGP_PahariEiJ_G0026618) #22 Ssr2 (MGP_PahariEiJ_G0026619) #23 Arhgef2 (MGP_PahariEiJ_G0026620) #25 Khdc4 (MGP_PahariEiJ_G0026621) #26 Rit1 (MGP_PahariEiJ_G0026622) #27 Syt11 (MGP_PahariEiJ_G0026623) #28 Gon4l (MGP_PahariEiJ_G0026624) #29 MGP_PahariEiJ_G0026625 #30 Dap3 (MGP_PahariEiJ_G0026626) #31 Ash1l (MGP_PahariEiJ_G0026627) #32 MGP_PahariEiJ_G0026628 #33 Rusc1 (MGP_PahariEiJ_G0026629) #33 Fdps (MGP_PahariEiJ_G0026630) Pklr (MGP_PahariEiJ_G0026631) #34 Hcn3 (MGP_PahariEiJ_G0026632) #35 Clk2 (MGP_PahariEiJ_G0026633) #36 Rat MODERN SPECIES 11 Rhbg (ENSRNOG00000019412) #8 Tsacc (ENSRNOG00000037552) Cct3 (ENSRNOG00000019090) #9 Glmp (ENSRNOG00000019281) #10 Tmem79 (ENSRNOG00000019414) #11 Smg5 (ENSRNOG00000019590) #12 Paqr6 (ENSRNOG00000026059) #13 Bglap (ENSRNOG00000019607) #14 Pmf1 (ENSRNOG00000019620) #15 Slc25a44 (ENSRNOG00000025269) #16 Sema4a (ENSRNOG00000019737) #17 Lmna (ENSRNOG00000019638) #18 Mex3a (ENSRNOG00000058654) #19 Rab25 (ENSRNOG00000023640) #20 Lamtor2 (ENSRNOG00000019908) #21 Ubqln4 (ENSRNOG00000019933) #22 Ssr2 (ENSRNOG00000019940) #23 Arhgef2 (ENSRNOG00000020027) #25 Khdc4 (ENSRNOG00000020139) #26 Rit1 (ENSRNOG00000064584) #27 Syt11 (ENSRNOG00000020279) #28 Gon4l (ENSRNOG00000020297) #29 Msto1 (ENSRNOG00000020357) #30 Dap3 (ENSRNOG00000020373) #31 Ash1l (ENSRNOG00000020386) #32 Fdps (ENSRNOG00000043377) #33 Pklr (ENSRNOG00000020420) #34 Hcn3 (ENSRNOG00000020444) #35 Scamp3 (ENSRNOG00000020500) #36 Entrep3 (ENSRNOG00000020518) Gba (ENSRNOG00000049281) Lesser Egyptian jerboa MODERN SPECIES 141 Mef2d (ENSJJAG00000011790) #7 ENSJJAG00000017067 Cct3 (ENSJJAG00000013939) #9 ENSJJAG00000019201 Tmem79 (ENSJJAG00000023610) #11 Smg5 (ENSJJAG00000022763) #12 Paqr6 (ENSJJAG00000001367) #13 ENSJJAG00000000652 #14 Pmf1 (ENSJJAG00000013470) #15 Slc25a44 (ENSJJAG00000001462) #16 Sema4a (ENSJJAG00000016229) #17 Lmna (ENSJJAG00000019904) #18 Mex3a (ENSJJAG00000020484) #19 Rab25 (ENSJJAG00000021013) #20 ENSJJAG00000021135 #21 Ubqln4 (ENSJJAG00000002118) #22 Ssr2 (ENSJJAG00000024209) #23 ENSJJAG00000016067 #25 ENSJJAG00000017646 #25 Rxfp4 (ENSJJAG00000013686) ENSJJAG00000020627 #26 Rit1 (ENSJJAG00000023411) #27 ENSJJAG00000010636 #28 ENSJJAG00000013614 #29 Msto1 (ENSJJAG00000019140) #30 Dap3 (ENSJJAG00000010235) #31 Ash1l (ENSJJAG00000017942) #32 Rusc1 (ENSJJAG00000001429) #33 Pklr (ENSJJAG00000019099) #34 Hcn3 (ENSJJAG00000017693) #35 Clk2 (ENSJJAG00000020860) #36 Kangaroo rat MODERN SPECIES 345 Sema4a (ENSDORG00000008821) #17 Lmna (ENSDORG00000002470) #18 Mex3a (ENSDORG00000002921) #19 Rab25 (ENSDORG00000002922) #20 Lamtor2 (ENSDORG00000002923) #21 Ubqln4 (ENSDORG00000010538) #22 ENSDORG00000010536 #23 Arhgef2 (ENSDORG00000012162) #25 Khdc4 (ENSDORG00000014602) #26 Rit1 (ENSDORG00000014601) #27 Syt11 (ENSDORG00000023709) #28 Gon4l (ENSDORG00000003598) #29 Msto1 (ENSDORG00000029541) #30 Dap3 (ENSDORG00000003596) #31 Ash1l (ENSDORG00000025575) #32 ENSDORG00000025813 #33 ENSDORG00000024404 #33 Fdps (ENSDORG00000005366) ENSDORG00000028002 Pklr (ENSDORG00000011632) #34 ENSDORG00000011629 #35 Rodentia_A ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Hystricomorpha ANCESTRAL SPECIES 45 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00570000079224.z.a #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Hystricomorpha_a ANCESTRAL SPECIES 54 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00570000079224.y #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Hystricomorpha_b ANCESTRAL SPECIES 61 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00570000079224.z.a #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Degu MODERN SPECIES 73 MEF2D (ENSODEG00000010190) #7 RHBG (ENSODEG00000009136) #8 ENSODEG00000009974 #9 GLMP (ENSODEG00000009800) #10 TMEM79 (ENSODEG00000012508) #11 SMG5 (ENSODEG00000012237) #12 PAQR6 (ENSODEG00000010747) #13 BGLAP (ENSODEG00000010926) #14 PMF1 (ENSODEG00000011902) #15 SLC25A44 (ENSODEG00000009774) #16 SEMA4A (ENSODEG00000009359) #17 LMNA (ENSODEG00000009369) #18 MEX3A (ENSODEG00000009643) #19 RAB25 (ENSODEG00000009908) #20 LAMTOR2 (ENSODEG00000010141) #21 UBQLN4 (ENSODEG00000010901) #22 SSR2 (ENSODEG00000010659) #23 ARHGEF2 (ENSODEG00000011373) #25 ENSODEG00000019992 ENSODEG00000009528 #26 RIT1 (ENSODEG00000010128) #27 SYT11 (ENSODEG00000010870) #28 ENSODEG00000011008 #29 ENSODEG00000010737 MSTO1 (ENSODEG00000011191) #30 DAP3 (ENSODEG00000010674) #31 ASH1L (ENSODEG00000009920) #32 ENSODEG00000010812 #33 FDPS (ENSODEG00000010515) PKLR (ENSODEG00000011272) #34 HCN3 (ENSODEG00000009743) #35 Long-tailed chinchilla MODERN SPECIES 252 MEF2D (ENSCLAG00000004702) #7 RHBG (ENSCLAG00000004625) #8 ENSCLAG00000004359 #9 GLMP (ENSCLAG00000004192) #10 TMEM79 (ENSCLAG00000004142) #11 SMG5 (ENSCLAG00000003983) #12 PAQR6 (ENSCLAG00000003899) #13 BGLAP (ENSCLAG00000003710) #14 PMF1 (ENSCLAG00000003672) #15 SLC25A44 (ENSCLAG00000005587) #16 SEMA4A (ENSCLAG00000005297) #17 LMNA (ENSCLAG00000003894) #18 MEX3A (ENSCLAG00000003842) #19 RAB25 (ENSCLAG00000003784) #20 LAMTOR2 (ENSCLAG00000003700) #21 UBQLN4 (ENSCLAG00000003519) #22 SSR2 (ENSCLAG00000003363) #23 ARHGEF2 (ENSCLAG00000013596) #25 KHDC4 (ENSCLAG00000010544) #26 RIT1 (ENSCLAG00000013305) #27 SYT11 (ENSCLAG00000013172) #28 ENSCLAG00000006556 #29 MSTO1 (ENSCLAG00000006273) #30 DAP3 (ENSCLAG00000005599) #31 ASH1L (ENSCLAG00000004536) #32 RUSC1 (ENSCLAG00000005579) #33 FDPS (ENSCLAG00000005410) PKLR (ENSCLAG00000005136) #34 HCN3 (ENSCLAG00000005021) #35 CLK2 (ENSCLAG00000003873) #36 SCAMP3 (ENSCLAG00000003649) #37 Guinea pig MODERN SPECIES 10 MEF2D (ENSCPOG00000036656) #7 RHBG (ENSCPOG00000011135) #8 CCT3 (ENSCPOG00000009131) #9 GLMP (ENSCPOG00000032634) #10 TMEM79 (ENSCPOG00000033881) #11 SMG5 (ENSCPOG00000015696) #12 PAQR6 (ENSCPOG00000019726) #13 BGLAP (ENSCPOG00000040505) #14 PMF1 (ENSCPOG00000015695) #15 SLC25A44 (ENSCPOG00000021129) #16 SEMA4A (ENSCPOG00000015694) #17 LMNA (ENSCPOG00000023214) #18 MEX3A (ENSCPOG00000020219) #19 RAB25 (ENSCPOG00000002472) #20 LAMTOR2 (ENSCPOG00000032238) #21 UBQLN4 (ENSCPOG00000002467) #22 SSR2 (ENSCPOG00000023729) #23 ARHGEF2 (ENSCPOG00000025396) #25 ENSCPOG00000032356 KHDC4 (ENSCPOG00000004870) #26 RIT1 (ENSCPOG00000004868) #27 SYT11 (ENSCPOG00000004866) #28 ENSCPOG00000004859 #29 MSTO1 (ENSCPOG00000004857) #30 DAP3 (ENSCPOG00000030924) #31 ASH1L (ENSCPOG00000004801) #32 RUSC1 (ENSCPOG00000032934) #33 FDPS (ENSCPOG00000015363) PKLR (ENSCPOG00000011202) #34 HCN3 (ENSCPOG00000027026) #35 CLK2 (ENSCPOG00000003176) #36 Naked mole-rat female MODERN SPECIES 10 IQGAP3 (ENSHGLG00000018362) MEF2D (ENSHGLG00000019055) #7 RHBG (ENSHGLG00000005998) #8 ENSHGLG00000003153 #9 GLMP (ENSHGLG00000041332) #10 TMEM79 (ENSHGLG00000018185) #11 SMG5 (ENSHGLG00000019152) #12 PAQR6 (ENSHGLG00000015640) #13 ENSHGLG00000007944 #14 SLC25A44 (ENSHGLG00000042222) #16 SEMA4A (ENSHGLG00000003587) #17 ENSHGLG00000036594 #18 MEX3A (ENSHGLG00000041429) #19 RAB25 (ENSHGLG00000005517) #20 LAMTOR2 (ENSHGLG00000036352) #21 UBQLN4 (ENSHGLG00000003684) #22 SSR2 (ENSHGLG00000035940) #23 RXFP4 (ENSHGLG00000037004) KHDC4 (ENSHGLG00000010495) #26 ENSHGLG00000034706 #27 SYT11 (ENSHGLG00000032288) #28 ENSHGLG00000006556 #29 MSTO1 (ENSHGLG00000018369) #30 DAP3 (ENSHGLG00000013978) #31 ASH1L (ENSHGLG00000008090) #32 ENSHGLG00000049863 ENSHGLG00000006300 #33 ENSHGLG00000005618 Sciuridae ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132.e #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Eurasian red squirrel MODERN SPECIES RHBG (ENSSVLG00005001146) #8 TSACC (ENSSVLG00005001124) CCT3 (ENSSVLG00005001076) #9 GLMP (ENSSVLG00005001024) #10 ENSSVLG00005000998 SMG5 (ENSSVLG00005000972) #12 PAQR6 (ENSSVLG00005000936) #13 BGLAP (ENSSVLG00005000913) #14 PMF1 (ENSSVLG00005000891) #15 SLC25A44 (ENSSVLG00005000872) #16 SEMA4A (ENSSVLG00005000802) #17 LMNA (ENSSVLG00005000714) #18 MEX3A (ENSSVLG00005000673) #19 RAB25 (ENSSVLG00005000653) #20 LAMTOR2 (ENSSVLG00005000628) #21 UBQLN4 (ENSSVLG00005000591) #22 SSR2 (ENSSVLG00005000552) #23 ARHGEF2 (ENSSVLG00005000357) #25 RXFP4 (ENSSVLG00005000258) KHDC4 (ENSSVLG00005000224) #26 ENSSVLG00005000188 #27 ENSSVLG00005000171 #28 ENSSVLG00005000147 #29 MSTO1 (ENSSVLG00005000136) #30 ENSSVLG00005000118 #32 RUSC1 (ENSSVLG00005000107) #33 FDPS (ENSSVLG00005000103) PKLR (ENSSVLG00005000101) #34 HCN3 (ENSSVLG00005000099) #35 CLK2 (ENSSVLG00005019777) #36 SCAMP3 (ENSSVLG00005019647) #37 Marmotini ANCESTRAL SPECIES 33 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132.e #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Marmotini_b ANCESTRAL SPECIES 37 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132.e #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Arctic ground squirrel MODERN SPECIES 309 RHBG (ENSUPAG00010004243) #8 TSACC (ENSUPAG00010004234) CCT3 (ENSUPAG00010004189) #9 GLMP (ENSUPAG00010004142) #10 TMEM79 (ENSUPAG00010004129) #11 SMG5 (ENSUPAG00010004091) #12 ENSUPAG00010004061 #13 BGLAP (ENSUPAG00010004045) #14 PMF1 (ENSUPAG00010004034) #15 SLC25A44 (ENSUPAG00010004013) #16 SEMA4A (ENSUPAG00010003712) #17 LMNA (ENSUPAG00010003669) #18 MEX3A (ENSUPAG00010003653) #19 RAB25 (ENSUPAG00010003640) #20 LAMTOR2 (ENSUPAG00010003634) #21 UBQLN4 (ENSUPAG00010003613) #22 SSR2 (ENSUPAG00010003598) #23 ARHGEF2 (ENSUPAG00010003114) #25 ENSUPAG00010003101 KHDC4 (ENSUPAG00010003067) #26 ENSUPAG00010003055 #27 SYT11 (ENSUPAG00010003045) #28 ENSUPAG00010002975 #29 MSTO1 (ENSUPAG00010002943) #30 ENSUPAG00010002886 #31 ASH1L (ENSUPAG00010002818) #32 RUSC1 (ENSUPAG00010002787) #33 FDPS (ENSUPAG00010002775) PKLR (ENSUPAG00010002743) #34 HCN3 (ENSUPAG00010002732) #35 CLK2 (ENSUPAG00010002672) #36 Squirrel MODERN SPECIES 180 TSACC (ENSSTOG00000001810) CCT3 (ENSSTOG00000001798) #9 GLMP (ENSSTOG00000015763) #10 TMEM79 (ENSSTOG00000026140) #11 SMG5 (ENSSTOG00000001780) #12 PAQR6 (ENSSTOG00000001772) #13 BGLAP (ENSSTOG00000027908) #14 ENSSTOG00000034466 PMF1 (ENSSTOG00000001768) #15 SLC25A44 (ENSSTOG00000001764) #16 SEMA4A (ENSSTOG00000028050) #17 LMNA (ENSSTOG00000001758) #18 MEX3A (ENSSTOG00000024275) #19 RAB25 (ENSSTOG00000000634) #20 LAMTOR2 (ENSSTOG00000023389) #21 UBQLN4 (ENSSTOG00000020043) #22 SSR2 (ENSSTOG00000028971) #23 ARHGEF2 (ENSSTOG00000000620) #25 RXFP4 (ENSSTOG00000000616) KHDC4 (ENSSTOG00000004732) #26 RIT1 (ENSSTOG00000021028) #27 SYT11 (ENSSTOG00000004720) #28 ENSSTOG00000004664 #29 MSTO1 (ENSSTOG00000004655) #30 DAP3 (ENSSTOG00000004627) #31 ASH1L (ENSSTOG00000019952) #32 RUSC1 (ENSSTOG00000004516) #33 ENSSTOG00000004475 PKLR (ENSSTOG00000022480) #34 HCN3 (ENSSTOG00000008989) #35 CLK2 (ENSSTOG00000008974) #36 Alpin marmot MODERN SPECIES 85 RHBG (ENSMMMG00000013553) #8 TSACC (ENSMMMG00000013564) CCT3 (ENSMMMG00000013571) #9 GLMP (ENSMMMG00000013644) #10 TMEM79 (ENSMMMG00000013693) #11 SMG5 (ENSMMMG00000013706) #12 PAQR6 (ENSMMMG00000013724) #13 BGLAP (ENSMMMG00000013734) #14 ENSMMMG00000013758 SLC25A44 (ENSMMMG00000013773) #16 SEMA4A (ENSMMMG00000013785) #17 LMNA (ENSMMMG00000013831) #18 MEX3A (ENSMMMG00000013855) #19 RAB25 (ENSMMMG00000013857) #20 LAMTOR2 (ENSMMMG00000013864) #21 UBQLN4 (ENSMMMG00000013874) #22 SSR2 (ENSMMMG00000013889) #23 ARHGEF2 (ENSMMMG00000013899) #25 RXFP4 (ENSMMMG00000014101) KHDC4 (ENSMMMG00000014104) #26 ENSMMMG00000014145 #27 SYT11 (ENSMMMG00000014151) #28 ENSMMMG00000014163 #29 MSTO1 (ENSMMMG00000014213) #30 DAP3 (ENSMMMG00000014245) #31 ASH1L (ENSMMMG00000014324) #32 ENSMMMG00000014387 #33 FDPS (ENSMMMG00000014395) PKLR (ENSMMMG00000014412) #34 HCN3 (ENSMMMG00000014457) #35 CLK2 (ENSMMMG00000014477) #36 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01090000260051.b.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Pika MODERN SPECIES 3341 SLC25A44 (ENSOPRG00000003022) #16 SEMA4A (ENSOPRG00000002992) #17 LMNA (ENSOPRG00000002966) #18 MEX3A (ENSOPRG00000002937) #19 RAB25 (ENSOPRG00000002894) #20 LAMTOR2 (ENSOPRG00000002877) #21 UBQLN4 (ENSOPRG00000002851) #22 SSR2 (ENSOPRG00000002830) #23 ARHGEF2 (ENSOPRG00000002782) #25 Rabbit MODERN SPECIES 4 MEF2D (ENSOCUG00000012173) #7 RHBG (ENSOCUG00000016130) #8 TSACC (ENSOCUG00000029754) CCT3 (ENSOCUG00000000137) #9 GLMP (ENSOCUG00000026609) #10 ENSOCUG00000012899 #11 SMG5 (ENSOCUG00000012886) #12 BGLAP (ENSOCUG00000025958) #14 PMF1 (ENSOCUG00000012870) #15 SLC25A44 (ENSOCUG00000012861) #16 SEMA4A (ENSOCUG00000001326) #17 LMNA (ENSOCUG00000010011) #18 ENSOCUG00000005640 #19 RAB25 (ENSOCUG00000005634) #20 LAMTOR2 (ENSOCUG00000027994) #21 UBQLN4 (ENSOCUG00000007156) #22 SSR2 (ENSOCUG00000008455) #23 ARHGEF2 (ENSOCUG00000001937) #25 ENSOCUG00000026819 KHDC4 (ENSOCUG00000010430) #26 RIT1 (ENSOCUG00000006377) #27 SYT11 (ENSOCUG00000027971) #28 ENSOCUG00000026145 #29 ENSOCUG00000010191 #29 MSTO1 (ENSOCUG00000010186) #30 DAP3 (ENSOCUG00000004785) #31 ENSOCUG00000034353 ASH1L (ENSOCUG00000014986) #32 ENSOCUG00000038913 #33 FDPS (ENSOCUG00000033536) PKLR (ENSOCUG00000014969) #34 Tree shrew MODERN SPECIES 3906 LMNA (ENSTBEG00000005069) #18 RAB25 (ENSTBEG00000004142) #20 LAMTOR2 (ENSTBEG00000003768) #21 UBQLN4 (ENSTBEG00000003066) #22 SSR2 (ENSTBEG00000002867) #23 ARHGEF2 (ENSTBEG00000001641) #25 RXFP4 (ENSTBEG00000001002) Primates ANCESTRAL SPECIES 7 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Strepsirrhini ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Lemuriformes ANCESTRAL SPECIES 11 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Mouse lemur MODERN SPECIES 11 TSACC (ENSMICG00000002266) ENSMICG00000030201 #9 ENSMICG00000038362 GLMP (ENSMICG00000002263) #10 TMEM79 (ENSMICG00000002260) #11 SMG5 (ENSMICG00000002257) #12 PAQR6 (ENSMICG00000002252) #13 BGLAP (ENSMICG00000045135) #14 ENSMICG00000002248 SLC25A44 (ENSMICG00000047168) #16 SEMA4A (ENSMICG00000002242) #17 LMNA (ENSMICG00000002236) #18 MEX3A (ENSMICG00000046214) #19 RAB25 (ENSMICG00000002230) #20 LAMTOR2 (ENSMICG00000002227) #21 UBQLN4 (ENSMICG00000002222) #22 ENSMICG00000038131 #23 ENSMICG00000030729 ARHGEF2 (ENSMICG00000002212) #25 KHDC4 (ENSMICG00000002202) #26 RIT1 (ENSMICG00000044667) #27 SYT11 (ENSMICG00000038586) #28 ENSMICG00000002183 #29 MSTO1 (ENSMICG00000028414) #30 DAP3 (ENSMICG00000031947) #31 ASH1L (ENSMICG00000007490) #32 RUSC1 (ENSMICG00000029028) #33 ENSMICG00000007468 PKLR (ENSMICG00000007458) #34 HCN3 (ENSMICG00000030454) #35 CLK2 (ENSMICG00000007436) #36 Lemuriformes_a ANCESTRAL SPECIES 19 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Coquerels sifaka MODERN SPECIES 750 RHBG (ENSPCOG00000010688) #8 TSACC (ENSPCOG00000018038) CCT3 (ENSPCOG00000027102) #9 GLMP (ENSPCOG00000027438) #10 TMEM79 (ENSPCOG00000027811) #11 SMG5 (ENSPCOG00000004741) #12 PAQR6 (ENSPCOG00000024324) #13 BGLAP (ENSPCOG00000020241) #14 ENSPCOG00000022530 SLC25A44 (ENSPCOG00000017429) #16 SEMA4A (ENSPCOG00000021582) #17 ENSPCOG00000028240 #18 MEX3A (ENSPCOG00000019307) #19 RAB25 (ENSPCOG00000005144) #20 LAMTOR2 (ENSPCOG00000023468) #21 UBQLN4 (ENSPCOG00000017664) #22 SSR2 (ENSPCOG00000022217) #23 ENSPCOG00000019355 ARHGEF2 (ENSPCOG00000016528) #25 KHDC4 (ENSPCOG00000027660) #26 RIT1 (ENSPCOG00000027211) #27 SYT11 (ENSPCOG00000017038) #28 ENSPCOG00000024149 #29 MSTO1 (ENSPCOG00000017579) #30 DAP3 (ENSPCOG00000027412) #31 ASH1L (ENSPCOG00000017924) #32 RUSC1 (ENSPCOG00000025947) #33 ENSPCOG00000022505 PKLR (ENSPCOG00000028225) #34 HCN3 (ENSPCOG00000021822) #35 CLK2 (ENSPCOG00000027461) #36 Greater bamboo lemur MODERN SPECIES 1411 MEX3A (ENSPSMG00000005991) #19 RAB25 (ENSPSMG00000006001) #20 LAMTOR2 (ENSPSMG00000006010) #21 UBQLN4 (ENSPSMG00000006027) #22 SSR2 (ENSPSMG00000006059) #23 ARHGEF2 (ENSPSMG00000006180) #25 RXFP4 (ENSPSMG00000006340) KHDC4 (ENSPSMG00000006345) #26 Bushbaby MODERN SPECIES 206 RHBG (ENSOGAG00000006682) #8 TSACC (ENSOGAG00000031578) CCT3 (ENSOGAG00000008967) #9 GLMP (ENSOGAG00000030120) #10 TMEM79 (ENSOGAG00000012912) #11 SMG5 (ENSOGAG00000004966) #12 PAQR6 (ENSOGAG00000031893) #13 BGLAP (ENSOGAG00000025659) #14 PMF1 (ENSOGAG00000004964) #15 ENSOGAG00000034650 #16 SEMA4A (ENSOGAG00000025069) #17 LMNA (ENSOGAG00000016961) #18 MEX3A (ENSOGAG00000029891) #19 RAB25 (ENSOGAG00000016955) #20 LAMTOR2 (ENSOGAG00000016953) #21 UBQLN4 (ENSOGAG00000016948) #22 SSR2 (ENSOGAG00000016945) #23 ARHGEF2 (ENSOGAG00000011581) #25 ENSOGAG00000026040 KHDC4 (ENSOGAG00000002261) #26 ENSOGAG00000002260 #27 SYT11 (ENSOGAG00000002258) #28 ENSOGAG00000000849 #29 MSTO1 (ENSOGAG00000031236) #30 DAP3 (ENSOGAG00000000845) #31 ASH1L (ENSOGAG00000009609) #32 RUSC1 (ENSOGAG00000025498) #33 PKLR (ENSOGAG00000028418) #34 HCN3 (ENSOGAG00000009594) #35 CLK2 (ENSOGAG00000009589) #36 SCAMP3 (ENSOGAG00000009585) #37 Haplorrhini ANCESTRAL SPECIES 7 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 Tarsier MODERN SPECIES 1540 LAMTOR2 (ENSTSYG00000028246) #21 UBQLN4 (ENSTSYG00000011830) #22 Simiiformes ANCESTRAL SPECIES 8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.e.b ENSGT00390000012642 ENSGT00900000141074.f Platyrrhini ANCESTRAL SPECIES 12 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.e.b.b.b ENSGT00390000012642 ENSGT00900000141074.e.b.b.a.a.a Cebidae ANCESTRAL SPECIES 12 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.e.b.b.b ENSGT00390000012642 ENSGT00900000141074.e.b.b.a.a.a Cebidae_a ANCESTRAL SPECIES 6 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.e.b.b.a.a.a ENSGT00390000008859.b.c #34 Capuchin MODERN SPECIES 427 TSACC (ENSCCAG00000022149) CCT3 (ENSCCAG00000033998) #9 ENSCCAG00000011652 GLMP (ENSCCAG00000034620) #10 TMEM79 (ENSCCAG00000028389) #11 SMG5 (ENSCCAG00000027409) #12 PAQR6 (ENSCCAG00000027826) #13 BGLAP (ENSCCAG00000020525) #14 PMF1 (ENSCCAG00000025850) #15 SLC25A44 (ENSCCAG00000026588) #16 SEMA4A (ENSCCAG00000032806) #17 LMNA (ENSCCAG00000023432) #18 MEX3A (ENSCCAG00000022351) #19 RAB25 (ENSCCAG00000021873) #20 LAMTOR2 (ENSCCAG00000026308) #21 UBQLN4 (ENSCCAG00000036689) #22 ENSCCAG00000029510 SSR2 (ENSCCAG00000037436) #23 ARHGEF2 (ENSCCAG00000029636) #25 KHDC4 (ENSCCAG00000023017) #26 RIT1 (ENSCCAG00000037656) #27 SYT11 (ENSCCAG00000016634) #28 GON4L (ENSCCAG00000037108) #29 MSTO1 (ENSCCAG00000035498) #30 DAP3 (ENSCCAG00000033532) #31 YY1AP1 (ENSCCAG00000026983) #29 Bolivian squirrel monkey MODERN SPECIES 136 RHBG (ENSSBOG00000035568) #8 TSACC (ENSSBOG00000020015) CCT3 (ENSSBOG00000035044) #9 GLMP (ENSSBOG00000020411) #10 TMEM79 (ENSSBOG00000021483) #11 SMG5 (ENSSBOG00000033339) #12 PAQR6 (ENSSBOG00000036021) #13 BGLAP (ENSSBOG00000026047) #14 PMF1 (ENSSBOG00000034025) #15 SLC25A44 (ENSSBOG00000020325) #16 SEMA4A (ENSSBOG00000019443) #17 LMNA (ENSSBOG00000014857) #18 MEX3A (ENSSBOG00000025317) #19 RAB25 (ENSSBOG00000032212) #20 LAMTOR2 (ENSSBOG00000035732) #21 UBQLN4 (ENSSBOG00000021728) #22 SSR2 (ENSSBOG00000020706) #23 ARHGEF2 (ENSSBOG00000034006) #25 RXFP4 (ENSSBOG00000034710) KHDC4 (ENSSBOG00000034469) #26 RIT1 (ENSSBOG00000023350) #27 SYT11 (ENSSBOG00000035584) #28 GON4L (ENSSBOG00000032520) #29 MSTO1 (ENSSBOG00000023864) #30 DAP3 (ENSSBOG00000033972) #31 YY1AP1 (ENSSBOG00000029484) #29 ASH1L (ENSSBOG00000026764) #32 RUSC1 (ENSSBOG00000020883) #33 ENSSBOG00000036252 ENSSBOG00000020002 PKLR (ENSSBOG00000030303) #34 Marmoset MODERN SPECIES 9 RHBG (ENSCJAG00000005838) #8 TSACC (ENSCJAG00000005831) ENSCJAG00000005776 #9 GLMP (ENSCJAG00000005757) #10 TMEM79 (ENSCJAG00000005765) #11 SMG5 (ENSCJAG00000005684) #12 PAQR6 (ENSCJAG00000005656) #13 BGLAP (ENSCJAG00000046802) #14 ENSCJAG00000005636 SLC25A44 (ENSCJAG00000005625) #16 SEMA4A (ENSCJAG00000005605) #17 LMNA (ENSCJAG00000005413) #18 MEX3A (ENSCJAG00000007711) #19 RAB25 (ENSCJAG00000007715) #20 LAMTOR2 (ENSCJAG00000007739) #21 UBQLN4 (ENSCJAG00000007755) #22 SSR2 (ENSCJAG00000046590) #23 ARHGEF2 (ENSCJAG00000007846) #25 ENSCJAG00000007878 KHDC4 (ENSCJAG00000007881) #26 RIT1 (ENSCJAG00000061243) #27 ENSCJAG00000032919 SYT11 (ENSCJAG00000043885) #28 GON4L (ENSCJAG00000007977) #29 ENSCJAG00000063148 #30 DAP3 (ENSCJAG00000008125) #31 YY1AP1 (ENSCJAG00000042285) #29 MSTO1 (ENSCJAG00000008092) #30 ENSCJAG00000081873 ASH1L (ENSCJAG00000008157) #32 RUSC1 (ENSCJAG00000008263) #33 Mas night monkey MODERN SPECIES 1180 TSACC (ENSANAG00000036292) CCT3 (ENSANAG00000036513) #9 ENSANAG00000026737 GLMP (ENSANAG00000020224) #10 TMEM79 (ENSANAG00000028444) #11 SMG5 (ENSANAG00000032899) #12 PAQR6 (ENSANAG00000023514) #13 BGLAP (ENSANAG00000034859) #14 ENSANAG00000028929 SLC25A44 (ENSANAG00000033058) #16 SEMA4A (ENSANAG00000032935) #17 LMNA (ENSANAG00000028703) #18 MEX3A (ENSANAG00000032597) #19 RAB25 (ENSANAG00000036045) #20 LAMTOR2 (ENSANAG00000036124) #21 UBQLN4 (ENSANAG00000031889) #22 SSR2 (ENSANAG00000024178) #23 ARHGEF2 (ENSANAG00000038394) #25 ENSANAG00000034289 #26 RIT1 (ENSANAG00000033671) #27 SYT11 (ENSANAG00000020380) #28 ENSANAG00000006710 GON4L (ENSANAG00000036572) #29 ENSANAG00000026598 ENSANAG00000035773 #30 DAP3 (ENSANAG00000033995) #31 YY1AP1 (ENSANAG00000022356) #29 ENSANAG00000024232 ENSANAG00000028010 #30 ASH1L (ENSANAG00000019337) #32 RUSC1 (ENSANAG00000027974) #33 Catarrhini ANCESTRAL SPECIES 10 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f ENSGT00390000008859.b.c #34 Hominoidea ANCESTRAL SPECIES 7 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f ENSGT00390000008859.b.c #34 Hominidae ANCESTRAL SPECIES 6 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f ENSGT00390000008859.b.c #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.c.a #30 ENSGT00530000064067.c.b #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00530000064067.d #30 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 Gorilla DUPLICATION Gorilla MODERN SPECIES 16 EIF2A (ENSGGOG00000015391) SERP1 (ENSGGOG00000015388) TSC22D2 (ENSGGOG00000024379) ENSGGOG00000007109 RNF13 (ENSGGOG00000007103) ANKUB1 (ENSGGOG00000011489) COMMD2 (ENSGGOG00000003255) WWTR1 (ENSGGOG00000000214) TM4SF4 (ENSGGOG00000001835) TM4SF1 (ENSGGOG00000003605) TM4SF18 (ENSGGOG00000002355) CP (ENSGGOG00000009531) HPS3 (ENSGGOG00000016590) HLTF (ENSGGOG00000001261) GYG1 (ENSGGOG00000008980) ENSGGOG00000027497 #22 CPA3 (ENSGGOG00000026314) CPB1 (ENSGGOG00000005316) AGTR1 (ENSGGOG00000001326) ZIC1 (ENSGGOG00000001101) ZIC4 (ENSGGOG00000042345) PLSCR5 (ENSGGOG00000027798) PLSCR1 (ENSGGOG00000010136) ENSGGOG00000004864 PLSCR4 (ENSGGOG00000006475) PLOD2 (ENSGGOG00000014284) ENSGGOG00000042473 ENSGGOG00000026282 ENSGGOG00000042601 DIPK2A (ENSGGOG00000015140) ENSGGOG00000042026 Gorilla MODERN SPECIES RHBG (ENSGGOG00000007638) #8 TSACC (ENSGGOG00000008582) CCT3 (ENSGGOG00000023333) #9 GLMP (ENSGGOG00000014243) #10 TMEM79 (ENSGGOG00000014240) #11 SMG5 (ENSGGOG00000010932) #12 ENSGGOG00000010923 #13 BGLAP (ENSGGOG00000010916) #14 PMF1 (ENSGGOG00000037793) #15 SLC25A44 (ENSGGOG00000010910) #16 SEMA4A (ENSGGOG00000000814) #17 LMNA (ENSGGOG00000000813) #18 MEX3A (ENSGGOG00000004513) #19 RAB25 (ENSGGOG00000006821) #20 LAMTOR2 (ENSGGOG00000006818) #21 ENSGGOG00000008916 #22 SSR2 (ENSGGOG00000024769) #23 ARHGEF2 (ENSGGOG00000005907) #25 RXFP4 (ENSGGOG00000034869) KHDC4 (ENSGGOG00000024568) #26 RIT1 (ENSGGOG00000001461) #27 SYT11 (ENSGGOG00000010111) #28 ENSGGOG00000025183 #29 GON4L (ENSGGOG00000000477) #29 ENSGGOG00000040593 #30 DAP3 (ENSGGOG00000007618) #31 YY1AP1 (ENSGGOG00000026024) #29 ENSGGOG00000000475 #30 ASH1L (ENSGGOG00000011218) #32 RUSC1 (ENSGGOG00000000408) #33 ENSGGOG00000039031 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.c.a #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00530000064067.d #30 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f Pan ANCESTRAL SPECIES ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.c.a #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00940000156698 #32 ENSGT00940000155046.t.g.b.b ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES RHBG (ENSPTRG00000001458) #8 TSACC (ENSPTRG00000001457) CCT3 (ENSPTRG00000001456) #9 GLMP (ENSPTRG00000001455) #10 TMEM79 (ENSPTRG00000001453) #11 SMG5 (ENSPTRG00000023925) #12 PAQR6 (ENSPTRG00000001451) #13 BGLAP (ENSPTRG00000041553) #14 PMF1 (ENSPTRG00000001450) #15 SLC25A44 (ENSPTRG00000001449) #16 SEMA4A (ENSPTRG00000001448) #17 LMNA (ENSPTRG00000001447) #18 MEX3A (ENSPTRG00000030373) #19 RAB25 (ENSPTRG00000001446) #20 LAMTOR2 (ENSPTRG00000001445) #21 UBQLN4 (ENSPTRG00000001444) #22 SSR2 (ENSPTRG00000001442) #23 ARHGEF2 (ENSPTRG00000001441) #25 RXFP4 (ENSPTRG00000001439) KHDC4 (ENSPTRG00000001438) #26 RIT1 (ENSPTRG00000001437) #27 SYT11 (ENSPTRG00000001436) #28 GON4L (ENSPTRG00000001433) #29 MSTO1 (ENSPTRG00000001428) #30 DAP3 (ENSPTRG00000001430) #31 YY1AP1 (ENSPTRG00000001429) #29 CLDN6 (ENSPTRG00000045058) ENSPTRG00000047569 ASH1L (ENSPTRG00000001425) #32 RUSC1 (ENSPTRG00000001424) #33 ENSPTRG00000043354 Chimpanzee MODERN SPECIES 199 ENSPTRG00000048190 #21 ENSPTRG00000051805 #22 Bonobo MODERN SPECIES RHBG (ENSPPAG00000032922) #8 TSACC (ENSPPAG00000040738) CCT3 (ENSPPAG00000042161) #9 GLMP (ENSPPAG00000028749) #10 TMEM79 (ENSPPAG00000042037) #11 SMG5 (ENSPPAG00000011996) #12 ENSPPAG00000027236 #13 BGLAP (ENSPPAG00000042608) #14 ENSPPAG00000034289 SLC25A44 (ENSPPAG00000027895) #16 SEMA4A (ENSPPAG00000043828) #17 LMNA (ENSPPAG00000037857) #18 MEX3A (ENSPPAG00000016303) #19 RAB25 (ENSPPAG00000031127) #20 LAMTOR2 (ENSPPAG00000037502) #21 UBQLN4 (ENSPPAG00000040262) #22 ENSPPAG00000036187 #23 ARHGEF2 (ENSPPAG00000043187) #25 RXFP4 (ENSPPAG00000011483) KHDC4 (ENSPPAG00000028145) #26 RIT1 (ENSPPAG00000043026) #27 SYT11 (ENSPPAG00000039359) #28 GON4L (ENSPPAG00000030169) #29 ENSPPAG00000028555 #30 ENSPPAG00000035270 DAP3 (ENSPPAG00000030901) #31 YY1AP1 (ENSPPAG00000041804) #29 ENSPPAG00000036109 ASH1L (ENSPPAG00000031869) #32 RUSC1 (ENSPPAG00000030052) #33 ENSPPAG00000027399 Human MODERN SPECIES CCT3 (ENSG00000163468) #9 VHLL (ENSG00000189030) GLMP (ENSG00000198715) #10 TMEM79 (ENSG00000163472) #11 SMG5 (ENSG00000198952) #12 PAQR6 (ENSG00000160781) #13 BGLAP (ENSG00000242252) #14 PMF1 (ENSG00000160783) #15 PMF1-BGLAP (ENSG00000260238) SLC25A44 (ENSG00000160785) #16 SEMA4A (ENSG00000196189) #17 LMNA (ENSG00000160789) #18 MEX3A (ENSG00000254726) #19 RAB25 (ENSG00000132698) #20 LAMTOR2 (ENSG00000116586) #21 UBQLN4 (ENSG00000160803) #22 SSR2 (ENSG00000163479) #23 ARHGEF2 (ENSG00000116584) #25 RXFP4 (ENSG00000173080) KHDC4 (ENSG00000132680) #26 RIT1 (ENSG00000143622) #27 SYT11 (ENSG00000132718) #28 GON4L (ENSG00000116580) #29 DAP3 (ENSG00000132676) #31 YY1AP1 (ENSG00000163374) #29 MSTO1 (ENSG00000125459) #30 ASH1L (ENSG00000116539) #32 RUSC1 (ENSG00000160753) #33 FDPS (ENSG00000160752) PKLR (ENSG00000143627) #34 HCN3 (ENSG00000143630) #35 Orangutan MODERN SPECIES ENSPPYG00000000717 RHBG (ENSPPYG00000000718) #8 ENSPPYG00000031428 CCT3 (ENSPPYG00000010639) #9 GLMP (ENSPPYG00000000721) #10 TMEM79 (ENSPPYG00000000722) #11 SMG5 (ENSPPYG00000000723) #12 PAQR6 (ENSPPYG00000000724) #13 ENSPPYG00000000725 SLC25A44 (ENSPPYG00000000726) #16 SEMA4A (ENSPPYG00000000727) #17 LMNA (ENSPPYG00000000728) #18 MEX3A (ENSPPYG00000000729) #19 RAB25 (ENSPPYG00000000730) #20 LAMTOR2 (ENSPPYG00000000731) #21 UBQLN4 (ENSPPYG00000000732) #22 SSR2 (ENSPPYG00000000733) #23 ARHGEF2 (ENSPPYG00000000734) #25 RXFP4 (ENSPPYG00000000735) KHDC4 (ENSPPYG00000000736) #26 RIT1 (ENSPPYG00000000737) #27 SYT11 (ENSPPYG00000039531) #28 GON4L (ENSPPYG00000000739) #29 MSTO2P (ENSPPYG00000010648) MSTO1 (ENSPPYG00000000740) #30 DAP3 (ENSPPYG00000000742) #31 YY1AP1 (ENSPPYG00000000743) #29 ASH1L (ENSPPYG00000000744) #32 ENSPPYG00000033728 RUSC1 (ENSPPYG00000000745) #33 ENSPPYG00000000746 Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f ENSGT00390000008859.b.c #34 Rhinopithecus ANCESTRAL SPECIES 59 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b.c #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.a.a #29 Black snub-nosed monkey MODERN SPECIES 1571 TSACC (ENSRBIG00000036225) CCT3 (ENSRBIG00000032821) #9 GLMP (ENSRBIG00000030275) #10 ENSRBIG00000032628 #11 SMG5 (ENSRBIG00000027428) #12 ENSRBIG00000027798 #13 BGLAP (ENSRBIG00000000752) #14 ENSRBIG00000036011 SLC25A44 (ENSRBIG00000041041) #16 ENSRBIG00000026928 SEMA4A (ENSRBIG00000037159) #17 LMNA (ENSRBIG00000041859) #18 MEX3A (ENSRBIG00000033197) #19 RAB25 (ENSRBIG00000044154) #20 LAMTOR2 (ENSRBIG00000043324) #21 UBQLN4 (ENSRBIG00000033879) #22 SSR2 (ENSRBIG00000039430) #23 ARHGEF2 (ENSRBIG00000035589) #25 RXFP4 (ENSRBIG00000032808) KHDC4 (ENSRBIG00000013231) #26 ALLC (ENSRBIG00000032207) DCDC2C (ENSRBIG00000042681) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1378 ENSRROG00000045601 #22 SSR2 (ENSRROG00000037774) #23 ARHGEF2 (ENSRROG00000032685) #25 RXFP4 (ENSRROG00000013377) KHDC4 (ENSRROG00000030403) #26 RIT1 (ENSRROG00000035955) #27 SYT11 (ENSRROG00000040729) #28 GON4L (ENSRROG00000002995) #29 MSTO1 (ENSRROG00000039402) #30 DAP3 (ENSRROG00000041228) #31 ENSRROG00000040709 #29 ENSRROG00000014134 #29 Golden snub-nosed monkey MODERN SPECIES 1290 ENSRROG00000041912 #11 SMG5 (ENSRROG00000030035) #12 PAQR6 (ENSRROG00000042038) #13 ENSRROG00000038103 SLC25A44 (ENSRROG00000030201) #16 ENSRROG00000044575 SEMA4A (ENSRROG00000043198) #17 LMNA (ENSRROG00000037915) #18 MEX3A (ENSRROG00000029193) #19 RAB25 (ENSRROG00000028851) #20 LAMTOR2 (ENSRROG00000045270) #21 ENSRROG00000027233 #22 Cercopithecinae ANCESTRAL SPECIES ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f ENSGT00390000008859.b.c #34 Vervet Monkey MODERN SPECIES 12 RHBG (ENSCSAG00000002135) #8 TSACC (ENSCSAG00000002131) CCT3 (ENSCSAG00000002128) #9 GLMP (ENSCSAG00000002123) #10 TMEM79 (ENSCSAG00000002125) #11 SMG5 (ENSCSAG00000002120) #12 PAQR6 (ENSCSAG00000002117) #13 BGLAP (ENSCSAG00000002112) #14 PMF1 (ENSCSAG00000002107) #15 SLC25A44 (ENSCSAG00000002104) #16 SEMA4A (ENSCSAG00000002102) #17 LMNA (ENSCSAG00000002099) #18 MEX3A (ENSCSAG00000002097) #19 RAB25 (ENSCSAG00000002096) #20 LAMTOR2 (ENSCSAG00000002094) #21 UBQLN4 (ENSCSAG00000002093) #22 SSR2 (ENSCSAG00000002090) #23 ARHGEF2 (ENSCSAG00000002088) #25 ENSCSAG00000000059 KHDC4 (ENSCSAG00000002082) #26 RIT1 (ENSCSAG00000002074) #27 SYT11 (ENSCSAG00000002072) #28 GON4L (ENSCSAG00000002060) #29 ENSCSAG00000002038 #30 DAP3 (ENSCSAG00000002035) #31 YY1AP1 (ENSCSAG00000002031) #29 ASH1L (ENSCSAG00000002027) #32 RUSC1 (ENSCSAG00000002023) #33 ENSCSAG00000002022 PKLR (ENSCSAG00000002021) #34 HCN3 (ENSCSAG00000002020) #35 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.g.a #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00530000064067.h #30 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.g.a #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00530000064067.h #30 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f Cercopithecinae_d ANCESTRAL SPECIES 33 ENSGT00570000079224 #9 ENSGT01010000224083 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.g.a #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 Sooty mangabey MODERN SPECIES 226 TSACC (ENSCATG00000032103) CCT3 (ENSCATG00000032970) #9 GLMP (ENSCATG00000032524) #10 TMEM79 (ENSCATG00000041384) #11 SMG5 (ENSCATG00000030539) #12 PAQR6 (ENSCATG00000029286) #13 BGLAP (ENSCATG00000014375) #14 PMF1 (ENSCATG00000029246) #15 SLC25A44 (ENSCATG00000039803) #16 ENSCATG00000042076 SEMA4A (ENSCATG00000036260) #17 LMNA (ENSCATG00000033574) #18 MEX3A (ENSCATG00000032390) #19 RAB25 (ENSCATG00000029662) #20 LAMTOR2 (ENSCATG00000030341) #21 UBQLN4 (ENSCATG00000023959) #22 SSR2 (ENSCATG00000030169) #23 ARHGEF2 (ENSCATG00000029542) #25 RXFP4 (ENSCATG00000019172) KHDC4 (ENSCATG00000034662) #26 RIT1 (ENSCATG00000045033) #27 SYT11 (ENSCATG00000038729) #28 GON4L (ENSCATG00000031497) #29 MSTO1 (ENSCATG00000041352) #30 DAP3 (ENSCATG00000037832) #31 YY1AP1 (ENSCATG00000042138) #29 Drill MODERN SPECIES 1097 CCT3 (ENSMLEG00000036583) #9 ENSMLEG00000043471 GLMP (ENSMLEG00000038171) #10 TMEM79 (ENSMLEG00000038027) #11 SMG5 (ENSMLEG00000041192) #12 PAQR6 (ENSMLEG00000038853) #13 BGLAP (ENSMLEG00000039620) #14 PMF1 (ENSMLEG00000032681) #15 SLC25A44 (ENSMLEG00000019841) #16 ENSMLEG00000037790 SEMA4A (ENSMLEG00000033397) #17 LMNA (ENSMLEG00000030821) #18 MEX3A (ENSMLEG00000023495) #19 RAB25 (ENSMLEG00000025037) #20 LAMTOR2 (ENSMLEG00000020600) #21 UBQLN4 (ENSMLEG00000036998) #22 SSR2 (ENSMLEG00000038454) #23 ARHGEF2 (ENSMLEG00000038613) #25 RXFP4 (ENSMLEG00000000539) KHDC4 (ENSMLEG00000036924) #26 RIT1 (ENSMLEG00000030499) #27 SYT11 (ENSMLEG00000034240) #28 GON4L (ENSMLEG00000039636) #29 Olive baboon MODERN SPECIES CCT3 (ENSPANG00000026114) #9 ENSPANG00000003881 GLMP (ENSPANG00000018021) #10 TMEM79 (ENSPANG00000011454) #11 SMG5 (ENSPANG00000011201) #12 PAQR6 (ENSPANG00000008734) #13 BGLAP (ENSPANG00000023523) #14 PMF1 (ENSPANG00000010692) #15 SLC25A44 (ENSPANG00000008735) #16 ENSPANG00000041668 SEMA4A (ENSPANG00000016075) #17 LMNA (ENSPANG00000003882) #18 MEX3A (ENSPANG00000020303) #19 RAB25 (ENSPANG00000003113) #20 LAMTOR2 (ENSPANG00000032414) #21 UBQLN4 (ENSPANG00000001757) #22 SSR2 (ENSPANG00000005571) #23 ARHGEF2 (ENSPANG00000006851) #25 ENSPANG00000004167 KHDC4 (ENSPANG00000011455) #26 RIT1 (ENSPANG00000035332) #27 SYT11 (ENSPANG00000018152) #28 GON4L (ENSPANG00000011456) #29 DAP3 (ENSPANG00000001758) #31 YY1AP1 (ENSPANG00000029721) #29 MSTO1 (ENSPANG00000006654) #30 ASH1L (ENSPANG00000004959) #32 ENSPANG00000045760 RUSC1 (ENSPANG00000006655) #33 FDPS (ENSPANG00000024920) PKLR (ENSPANG00000022417) #34 Macaca ANCESTRAL SPECIES ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00390000002944.e.a.a.a.a ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.g.a #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00390000016256.l.a.a #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f.a Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 262 TSACC (ENSMNEG00000030389) CCT3 (ENSMNEG00000027103) #9 GLMP (ENSMNEG00000034996) #10 TMEM79 (ENSMNEG00000040540) #11 SMG5 (ENSMNEG00000044425) #12 ENSMNEG00000037204 #13 BGLAP (ENSMNEG00000014728) #14 PMF1 (ENSMNEG00000030198) #15 SLC25A44 (ENSMNEG00000032439) #16 ENSMNEG00000041520 SEMA4A (ENSMNEG00000027619) #17 LMNA (ENSMNEG00000045506) #18 MEX3A (ENSMNEG00000031569) #19 RAB25 (ENSMNEG00000004251) #20 LAMTOR2 (ENSMNEG00000044990) #21 UBQLN4 (ENSMNEG00000028661) #22 ENSMNEG00000036868 #23 ARHGEF2 (ENSMNEG00000030024) #25 RXFP4 (ENSMNEG00000025991) KHDC4 (ENSMNEG00000005131) #26 RIT1 (ENSMNEG00000039545) #27 SYT11 (ENSMNEG00000039442) #28 GON4L (ENSMNEG00000022837) #29 DAP3 (ENSMNEG00000043408) #31 YY1AP1 (ENSMNEG00000038421) #29 MSTO1 (ENSMNEG00000030351) #30 ASH1L (ENSMNEG00000004882) #32 RUSC1 (ENSMNEG00000037791) #33 ENSMNEG00000034281 ENSMNEG00000041237 PKLR (ENSMNEG00000009109) #34 Pig-tailed macaque MODERN SPECIES 90 TECTB (ENSMNEG00000025162) GPAM (ENSMNEG00000041070) ENSMNEG00000038669 ADRA2A (ENSMNEG00000006398) SHOC2 (ENSMNEG00000039245) BBIP1 (ENSMNEG00000041769) PDCD4 (ENSMNEG00000043104) RBM20 (ENSMNEG00000030297) SMC3 (ENSMNEG00000001042) DUSP5 (ENSMNEG00000033790) ENSMNEG00000038014 ENSMNEG00000042963 MXI1 (ENSMNEG00000034671) ADD3 (ENSMNEG00000028760) XPNPEP1 (ENSMNEG00000029393) ENSMNEG00000035210 #22 ENSMNEG00000028414 Macaca_a ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000002390.b #11 ENSGT00390000005131 #10 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.k #29 ENSGT00530000064067.g.a #30 ENSGT00530000064067.g.b #30 ENSGT00390000015248 #31 ENSGT00390000016256.l.b #29 ENSGT00390000016256.l.a.a #29 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00390000012642 ENSGT00900000141074.f.a Rhesus MODERN SPECIES RHBG (ENSMMUG00000017965) #8 TSACC (ENSMMUG00000051030) CCT3 (ENSMMUG00000019034) #9 VHLL (ENSMMUG00000064443) GLMP (ENSMMUG00000000092) #10 TMEM79 (ENSMMUG00000047929) #11 SMG5 (ENSMMUG00000000090) #12 PAQR6 (ENSMMUG00000000085) #13 BGLAP (ENSMMUG00000004902) #16 SEMA4A (ENSMMUG00000004901) #17 ENSMMUG00000037731 LMNA (ENSMMUG00000016096) #18 MEX3A (ENSMMUG00000052160) #19 RAB25 (ENSMMUG00000022306) #20 LAMTOR2 (ENSMMUG00000012126) #21 UBQLN4 (ENSMMUG00000009983) #22 SSR2 (ENSMMUG00000013495) #23 ARHGEF2 (ENSMMUG00000005092) #25 RXFP4 (ENSMMUG00000005090) KHDC4 (ENSMMUG00000004648) #26 RIT1 (ENSMMUG00000053454) #27 SYT11 (ENSMMUG00000021312) #28 GON4L (ENSMMUG00000009987) #29 ENSMMUG00000062397 #30 DAP3 (ENSMMUG00000018080) #31 ASH1L (ENSMMUG00000023146) #32 ENSMMUG00000009981 #30 ENSMMUG00000058124 RUSC1 (ENSMMUG00000023145) #33 ENSMMUG00000063807 FDPS (ENSMMUG00000023144) Crab-eating macaque MODERN SPECIES 19 GPAM (ENSMFAG00000032340) ENSMFAG00000049620 ENSMFAG00000063286 RBM20 (ENSMFAG00000036795) SMC3 (ENSMFAG00000003098) ENSMFAG00000063112 DUSP5 (ENSMFAG00000002031) ENSMFAG00000065587 ENSMFAG00000059019 ENSMFAG00000002433 MXI1 (ENSMFAG00000030475) ENSMFAG00000056864 ADD3 (ENSMFAG00000031457) XPNPEP1 (ENSMFAG00000030034) ENSMFAG00000051095 ENSMFAG00000031866 #22 ENSMFAG00000055089 ENSMFAG00000011968 ENSMFAG00000058560 ENSMFAG00000058920 ENSMFAG00000056460 SORCS1 (ENSMFAG00000042566) ENSMFAG00000046202 ENSMFAG00000050436 SORCS3 (ENSMFAG00000044111) CFAP58 (ENSMFAG00000035977) ITPRIP (ENSMFAG00000057374) GSTO2 (ENSMFAG00000050681) ENSMFAG00000061086 GSTO1 (ENSMFAG00000033599) CFAP43 (ENSMFAG00000043638) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Artiodactyla ANCESTRAL SPECIES ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Cetacea ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524.a.a ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.k ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Odontoceti ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524.a.a ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100.g.a #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.k ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Odontoceti_a ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524.a.a.a ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100.g.a #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.k ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Dolphin MODERN SPECIES 1344 MEX3A (ENSTTRG00000013346) #19 RAB25 (ENSTTRG00000013345) #20 LAMTOR2 (ENSTTRG00000013344) #21 UBQLN4 (ENSTTRG00000013343) #22 SSR2 (ENSTTRG00000013342) #23 ARHGEF2 (ENSTTRG00000013341) #25 KHDC4 (ENSTTRG00000013339) #26 RIT1 (ENSTTRG00000013338) #27 SYT11 (ENSTTRG00000013337) #28 ENSTTRG00000013336 #29 ENSTTRG00000013334 DAP3 (ENSTTRG00000013332) #31 ASH1L (ENSTTRG00000013329) #32 RUSC1 (ENSTTRG00000013327) #33 FDPS (ENSTTRG00000013326) Odontoceti_b ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524.a.a.a ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100.g.a #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.k ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Vaquita MODERN SPECIES RHBG (ENSPSNG00000002332) #8 ENSPSNG00000002309 CCT3 (ENSPSNG00000002288) #9 GLMP (ENSPSNG00000002245) #10 TMEM79 (ENSPSNG00000002228) #11 SMG5 (ENSPSNG00000002185) #12 PAQR6 (ENSPSNG00000002135) #13 BGLAP (ENSPSNG00000002109) #14 ENSPSNG00000002083 SLC25A44 (ENSPSNG00000002061) #16 SEMA4A (ENSPSNG00000001991) #17 LMNA (ENSPSNG00000001902) #18 MEX3A (ENSPSNG00000001802) #19 RAB25 (ENSPSNG00000001780) #20 ENSPSNG00000001753 #21 UBQLN4 (ENSPSNG00000001709) #22 SSR2 (ENSPSNG00000001665) #23 ARHGEF2 (ENSPSNG00000001483) #25 KHDC4 (ENSPSNG00000001328) #26 RIT1 (ENSPSNG00000001303) #27 SYT11 (ENSPSNG00000001267) #28 ENSPSNG00000001061 #29 MSTO1 (ENSPSNG00000000978) #30 DAP3 (ENSPSNG00000000898) #31 ASH1L (ENSPSNG00000000798) #32 RUSC1 (ENSPSNG00000000714) #33 ENSPSNG00000000654 PKLR (ENSPSNG00000000611) #34 HCN3 (ENSPSNG00000000564) #35 CLK2 (ENSPSNG00000000440) #36 SCAMP3 (ENSPSNG00000000384) #37 Monodontidae ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524.a.a.a ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100.g.a #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.k ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Narwhal MODERN SPECIES 304 RHBG (ENSMMNG00015011460) #8 ENSMMNG00015011474 CCT3 (ENSMMNG00015011489) #9 GLMP (ENSMMNG00015011520) #10 TMEM79 (ENSMMNG00015011552) #11 SMG5 (ENSMMNG00015011588) #12 ENSMMNG00015011675 #13 BGLAP (ENSMMNG00015011726) #14 ENSMMNG00015011739 SLC25A44 (ENSMMNG00015011755) #16 SEMA4A (ENSMMNG00015011785) #17 LMNA (ENSMMNG00015011841) #18 MEX3A (ENSMMNG00015011903) #19 RAB25 (ENSMMNG00015011919) #20 ENSMMNG00015011942 #21 UBQLN4 (ENSMMNG00015011968) #22 SSR2 (ENSMMNG00015012014) #23 ARHGEF2 (ENSMMNG00015012060) #25 KHDC4 (ENSMMNG00015012142) #26 RIT1 (ENSMMNG00015012172) #27 SYT11 (ENSMMNG00015012196) #28 ENSMMNG00015012250 #29 MSTO1 (ENSMMNG00015012309) #30 DAP3 (ENSMMNG00015012383) #31 ASH1L (ENSMMNG00015012492) #32 RUSC1 (ENSMMNG00015012570) #33 ENSMMNG00015012598 PKLR (ENSMMNG00015012630) #34 HCN3 (ENSMMNG00015012673) #35 CLK2 (ENSMMNG00015012695) #36 SCAMP3 (ENSMMNG00015012743) #37 Beluga whale MODERN SPECIES 69 RHBG (ENSDLEG00000019871) #8 ENSDLEG00000019867 CCT3 (ENSDLEG00000019863) #9 GLMP (ENSDLEG00000019860) #10 TMEM79 (ENSDLEG00000019854) #11 SMG5 (ENSDLEG00000019769) #12 PAQR6 (ENSDLEG00000019756) #13 BGLAP (ENSDLEG00000019752) #14 ENSDLEG00000019747 SLC25A44 (ENSDLEG00000019739) #16 SEMA4A (ENSDLEG00000019729) #17 MEX3A (ENSDLEG00000019727) #19 LMNA (ENSDLEG00000019723) #18 RAB25 (ENSDLEG00000019718) #20 ENSDLEG00000019714 #21 UBQLN4 (ENSDLEG00000019705) #22 SSR2 (ENSDLEG00000019690) #23 ARHGEF2 (ENSDLEG00000018134) #25 KIAA0907 (ENSDLEG00000017767) #26 RIT1 (ENSDLEG00000017727) #27 SYT11 (ENSDLEG00000017715) #28 ENSDLEG00000017562 #29 MSTO1 (ENSDLEG00000017154) #30 DAP3 (ENSDLEG00000016565) #31 ASH1L (ENSDLEG00000016452) #32 RUSC1 (ENSDLEG00000016359) #33 FDPS (ENSDLEG00000016328) PKLR (ENSDLEG00000015946) #34 HCN3 (ENSDLEG00000015901) #35 SCAMP3 (ENSDLEG00000015441) #36 FAM189B (ENSDLEG00000015147) Sperm whale MODERN SPECIES 15 TTC24 (ENSPCTG00005009800) NAXE (ENSPCTG00005009979) ENSPCTG00005010033 ENSPCTG00005010076 #9 SEMA4A (ENSPCTG00005010191) #17 ENSPCTG00005010331 ENSPCTG00005010348 ENSPCTG00005010364 SLC25A44 (ENSPCTG00005010382) #16 PMF1 (ENSPCTG00005010461) BGLAP (ENSPCTG00005010569) #14 PAQR6 (ENSPCTG00005010635) #13 SMG5 (ENSPCTG00005010741) #12 RAB25 (ENSPCTG00005010780) #20 LAMTOR2 (ENSPCTG00005010831) #21 UBQLN4 (ENSPCTG00005010892) #22 SSR2 (ENSPCTG00005010954) #23 RIT1 (ENSPCTG00005011092) #27 SYT11 (ENSPCTG00005011179) #28 GON4L (ENSPCTG00005011256) #29 MSTO1 (ENSPCTG00005011784) #30 DAP3 (ENSPCTG00005011863) #31 ASH1L (ENSPCTG00005012095) #32 KCNN3 (ENSPCTG00005012225) ADAR (ENSPCTG00005012266) SHC1 (ENSPCTG00005012451) PBXIP1 (ENSPCTG00005012606) EFNA3 (ENSPCTG00005012694) TDRD10 (ENSPCTG00005012748) SHE (ENSPCTG00005012880) IL6R (ENSPCTG00005012978) Blue whale MODERN SPECIES ENSBMSG00010004948 MEF2D (ENSBMSG00010004921) #7 RHBG (ENSBMSG00010004893) #8 CCT3 (ENSBMSG00010004881) #9 GLMP (ENSBMSG00010004864) #10 TMEM79 (ENSBMSG00010004850) #11 SMG5 (ENSBMSG00010004787) #12 BGLAP (ENSBMSG00010004757) #14 ENSBMSG00010004738 SLC25A44 (ENSBMSG00010004726) #16 SEMA4A (ENSBMSG00010004700) #17 LMNA (ENSBMSG00010004668) #18 MEX3A (ENSBMSG00010004637) #19 RAB25 (ENSBMSG00010004624) #20 LAMTOR2 (ENSBMSG00010004612) #21 UBQLN4 (ENSBMSG00010004574) #22 SSR2 (ENSBMSG00010004540) #23 ARHGEF2 (ENSBMSG00010004265) #25 KHDC4 (ENSBMSG00010004174) #26 RIT1 (ENSBMSG00010004147) #27 SYT11 (ENSBMSG00010004119) #28 ENSBMSG00010004110 ENSBMSG00010003566 #29 MSTO1 (ENSBMSG00010003477) #30 DAP3 (ENSBMSG00010003437) #31 ASH1L (ENSBMSG00010003357) #32 RUSC1 (ENSBMSG00010003260) #33 ENSBMSG00010003229 PKLR (ENSBMSG00010003143) #34 ENSBMSG00010003104 #35 CLK2 (ENSBMSG00010003067) #36 Pecora ANCESTRAL SPECIES 2 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Yarkand deer MODERN SPECIES 12 MEF2D (ENSCHYG00000022984) #7 RHBG (ENSCHYG00000023227) #8 TSACC (ENSCHYG00000023310) CCT3 (ENSCHYG00000023340) #9 GLMP (ENSCHYG00000023522) #10 TMEM79 (ENSCHYG00000023640) #11 SMG5 (ENSCHYG00000023680) #12 ENSCHYG00000023870 #13 ENSCHYG00000024011 SLC25A44 (ENSCHYG00000024104) #16 SEMA4A (ENSCHYG00000024199) #17 LMNA (ENSCHYG00000024365) #18 MEX3A (ENSCHYG00000024742) #19 RAB25 (ENSCHYG00000024758) #20 ENSCHYG00000024792 #21 UBQLN4 (ENSCHYG00000024829) #22 SSR2 (ENSCHYG00000024941) #23 ARHGEF2 (ENSCHYG00000025091) #25 ENSCHYG00000025955 KHDC4 (ENSCHYG00000025994) #26 RIT1 (ENSCHYG00000026149) #27 SYT11 (ENSCHYG00000026203) #28 MSTO1 (ENSCHYG00000026231) #30 ENSCHYG00000026325 #31 ASH1L (ENSCHYG00000026415) #32 RUSC1 (ENSCHYG00000026489) #33 FDPS (ENSCHYG00000026456) PKLR (ENSCHYG00000004833) #34 HCN3 (ENSCHYG00000004855) #35 CLK2 (ENSCHYG00000004875) #36 SCAMP3 (ENSCHYG00000004931) #37 Percora_a ANCESTRAL SPECIES 1 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Bovidae ANCESTRAL SPECIES 1 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Caprinae ANCESTRAL SPECIES 2 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Rambouillet Sheep MODERN SPECIES RHBG (ENSOARG00020017414) #8 TSACC (ENSOARG00020017382) CCT3 (ENSOARG00020017271) #9 GLMP (ENSOARG00020017115) #10 TMEM79 (ENSOARG00020017071) #11 SMG5 (ENSOARG00020016889) #12 PAQR6 (ENSOARG00020016793) #13 BGLAP (ENSOARG00020016735) #14 PMF1 (ENSOARG00020016596) #15 SLC25A44 (ENSOARG00020016505) #16 SEMA4A (ENSOARG00020016412) #17 LMNA (ENSOARG00020016018) #18 MEX3A (ENSOARG00020015946) #19 RAB25 (ENSOARG00020015913) #20 LAMTOR2 (ENSOARG00020015838) #21 UBQLN4 (ENSOARG00020015789) #22 ENSOARG00020015739 SSR2 (ENSOARG00020015600) #23 ARHGEF2 (ENSOARG00020014346) #25 RXFP4 (ENSOARG00020014277) KHDC4 (ENSOARG00020014119) #26 RIT1 (ENSOARG00020013942) #27 SYT11 (ENSOARG00020013872) #28 ENSOARG00020013774 #29 ENSOARG00020013192 #29 ENSOARG00020013143 #29 MSTO1 (ENSOARG00020013057) #30 DAP3 (ENSOARG00020012723) #31 ENSOARG00020012690 ASH1L (ENSOARG00020012553) #32 RUSC1 (ENSOARG00020012314) #33 Goat MODERN SPECIES 22 RHBG (ENSCHIG00000018535) #8 TSACC (ENSCHIG00000008701) CCT3 (ENSCHIG00000011665) #9 GLMP (ENSCHIG00000018226) #10 TMEM79 (ENSCHIG00000024223) #11 SMG5 (ENSCHIG00000007709) #12 PAQR6 (ENSCHIG00000019473) #13 BGLAP (ENSCHIG00000025718) #14 ENSCHIG00000025721 SLC25A44 (ENSCHIG00000011510) #16 SEMA4A (ENSCHIG00000022763) #17 LMNA (ENSCHIG00000022777) #18 MEX3A (ENSCHIG00000012770) #19 RAB25 (ENSCHIG00000018911) #20 LAMTOR2 (ENSCHIG00000026461) #21 UBQLN4 (ENSCHIG00000015053) #22 SSR2 (ENSCHIG00000027199) #23 ARHGEF2 (ENSCHIG00000018812) #25 ENSCHIG00000012796 KHDC4 (ENSCHIG00000022965) #26 RIT1 (ENSCHIG00000010506) #27 SYT11 (ENSCHIG00000021455) #28 ENSCHIG00000025192 #29 ENSCHIG00000011207 #29 ENSCHIG00000021776 #29 MSTO1 (ENSCHIG00000027233) #30 DAP3 (ENSCHIG00000017638) #31 ASH1L (ENSCHIG00000026354) #32 RUSC1 (ENSCHIG00000014020) #33 FDPS (ENSCHIG00000020170) PKLR (ENSCHIG00000006078) #34 Bovinae ANCESTRAL SPECIES 1 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Bos ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Bos_b ANCESTRAL SPECIES 1 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Hybrid Bos Indicus MODERN SPECIES 22 RHBG (ENSBIXG00005013672) #8 TSACC (ENSBIXG00005013651) CCT3 (ENSBIXG00005013620) #9 GLMP (ENSBIXG00005013569) #10 TMEM79 (ENSBIXG00005013531) #11 SMG5 (ENSBIXG00005013497) #12 PAQR6 (ENSBIXG00005001616) #13 BGLAP (ENSBIXG00005013414) #14 ENSBIXG00005013392 SLC25A44 (ENSBIXG00005013383) #16 SEMA4A (ENSBIXG00005013357) #17 LMNA (ENSBIXG00005013303) #18 MEX3A (ENSBIXG00005013155) #19 RAB25 (ENSBIXG00005001504) #20 LAMTOR2 (ENSBIXG00005013118) #21 UBQLN4 (ENSBIXG00005007481) #22 SSR2 (ENSBIXG00005013052) #23 ARHGEF2 (ENSBIXG00005012933) #25 ENSBIXG00005012726 KHDC4 (ENSBIXG00005012701) #26 RIT1 (ENSBIXG00005012630) #27 SYT11 (ENSBIXG00005012585) #28 ENSBIXG00005000325 #29 MSTO1 (ENSBIXG00005012454) #30 DAP3 (ENSBIXG00005012416) #31 ASH1L (ENSBIXG00005012290) #32 RUSC1 (ENSBIXG00005012185) #33 FDPS (ENSBIXG00005012083) PKLR (ENSBIXG00005012018) #34 HCN3 (ENSBIXG00005011927) #35 SCAMP3 (ENSBIXG00005006790) #37 Cow MODERN SPECIES 22 RHBG (ENSBTAG00000012234) #8 TSACC (ENSBTAG00000049722) CCT3 (ENSBTAG00000006370) #9 GLMP (ENSBTAG00000006364) #10 TMEM79 (ENSBTAG00000009436) #11 SMG5 (ENSBTAG00000009435) #12 PAQR6 (ENSBTAG00000009434) #13 BGLAP (ENSBTAG00000009433) #14 PMF1 (ENSBTAG00000009432) SLC25A44 (ENSBTAG00000009431) #16 SEMA4A (ENSBTAG00000012228) #17 LMNA (ENSBTAG00000017574) #18 MEX3A (ENSBTAG00000019158) #19 RAB25 (ENSBTAG00000018914) #20 LAMTOR2 (ENSBTAG00000011754) #21 UBQLN4 (ENSBTAG00000001548) #22 SSR2 (ENSBTAG00000001212) #23 ARHGEF2 (ENSBTAG00000000113) #25 KHDC4 (ENSBTAG00000000108) RIT1 (ENSBTAG00000000105) #27 SYT11 (ENSBTAG00000011209) #28 GON4L (ENSBTAG00000020356) #29 ENSBTAG00000045596 #29 MSTO1 (ENSBTAG00000026613) #30 DAP3 (ENSBTAG00000001199) #31 ASH1L (ENSBTAG00000003954) #32 RUSC1 (ENSBTAG00000054061) #33 FDPS (ENSBTAG00000003948) PKLR (ENSBTAG00000017056) #34 HCN3 (ENSBTAG00000017055) #35 CLK2 (ENSBTAG00000014393) #36 Bos_a ANCESTRAL SPECIES 27 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.i.a.a #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Domestic yak MODERN SPECIES 22 RHBG (ENSBGRG00000024238) #8 TSACC (ENSBGRG00000024207) CCT3 (ENSBGRG00000023849) #9 GLMP (ENSBGRG00000023724) #10 ENSBGRG00000023682 SMG5 (ENSBGRG00000023383) #12 PAQR6 (ENSBGRG00000023244) #13 BGLAP (ENSBGRG00000023200) #14 ENSBGRG00000023141 SLC25A44 (ENSBGRG00000023097) #16 SEMA4A (ENSBGRG00000023018) #17 LMNA (ENSBGRG00000022777) #18 MEX3A (ENSBGRG00000022736) #19 RAB25 (ENSBGRG00000022700) #20 ENSBGRG00000022629 #21 UBQLN4 (ENSBGRG00000022445) #22 ENSBGRG00000022398 SSR2 (ENSBGRG00000022293) #23 ARHGEF2 (ENSBGRG00000022001) #25 ENSBGRG00000021933 KHDC4 (ENSBGRG00000021657) #26 RIT1 (ENSBGRG00000021581) #27 SYT11 (ENSBGRG00000021562) #28 ENSBGRG00000021494 #29 ENSBGRG00000021483 ENSBGRG00000021040 #29 MSTO1 (ENSBGRG00000020857) #30 ENSBGRG00000020608 #31 ENSBGRG00000020578 ASH1L (ENSBGRG00000020526) #32 RUSC1 (ENSBGRG00000020363) #33 Wild yak MODERN SPECIES 1034 MEF2D (ENSBMUG00000014724) #7 RHBG (ENSBMUG00000014644) #8 TSACC (ENSBMUG00000014639) CCT3 (ENSBMUG00000014597) #9 GLMP (ENSBMUG00000014534) #10 TMEM79 (ENSBMUG00000014504) #11 SMG5 (ENSBMUG00000014498) #12 PAQR6 (ENSBMUG00000014479) #13 ENSBMUG00000014459 SLC25A44 (ENSBMUG00000014438) #16 SEMA4A (ENSBMUG00000014414) #17 LMNA (ENSBMUG00000014271) #18 MEX3A (ENSBMUG00000014139) #19 RAB25 (ENSBMUG00000014113) #20 ENSBMUG00000014101 #21 UBQLN4 (ENSBMUG00000014079) #22 SSR2 (ENSBMUG00000014061) #23 ARHGEF2 (ENSBMUG00000013945) #25 ENSBMUG00000013792 KHDC4 (ENSBMUG00000013747) #26 RIT1 (ENSBMUG00000013671) #27 SYT11 (ENSBMUG00000013663) #28 ENSBMUG00000013609 #29 MSTO1 (ENSBMUG00000013423) #30 DAP3 (ENSBMUG00000013380) #31 ASH1L (ENSBMUG00000013247) #32 RUSC1 (ENSBMUG00000013186) #33 FDPS (ENSBMUG00000013151) PKLR (ENSBMUG00000013109) #34 HCN3 (ENSBMUG00000013008) #35 CLK2 (ENSBMUG00000012989) #36 American bison MODERN SPECIES 3022 RHBG (ENSBBBG00000003929) #8 TSACC (ENSBBBG00000015743) CCT3 (ENSBBBG00000015738) #9 GLMP (ENSBBBG00000015689) #10 ENSBBBG00000003912 SMG5 (ENSBBBG00000015667) #12 PAQR6 (ENSBBBG00000015650) #13 BGLAP (ENSBBBG00000015635) #14 PMF1 (ENSBBBG00000015627) #15 SLC25A44 (ENSBBBG00000003424) #16 SEMA4A (ENSBBBG00000003444) #17 LMNA (ENSBBBG00000003866) #18 MEX3A (ENSBBBG00000015363) #19 RAB25 (ENSBBBG00000003829) #20 LAMTOR2 (ENSBBBG00000003825) #21 UBQLN4 (ENSBBBG00000007559) #22 SSR2 (ENSBBBG00000003501) #23 ARHGEF2 (ENSBBBG00000001262) #25 RXFP4 (ENSBBBG00000001313) KHDC4 (ENSBBBG00000001328) #26 RIT1 (ENSBBBG00000015315) #27 SYT11 (ENSBBBG00000003798) #28 ENSBBBG00000007558 #29 ENSBBBG00000015141 MSTO1 (ENSBBBG00000015135) #30 DAP3 (ENSBBBG00000003747) #31 ASH1L (ENSBBBG00000014991) #32 ENSBBBG00000014947 #33 ENSBBBG00000014944 #33 FDPS (ENSBBBG00000014941) PKLR (ENSBBBG00000014928) #34 Siberian musk deer MODERN SPECIES 1202 TSACC (ENSMMSG00000021888) CCT3 (ENSMMSG00000021905) #9 GLMP (ENSMMSG00000021977) #10 TMEM79 (ENSMMSG00000022007) #11 SMG5 (ENSMMSG00000022024) #12 PAQR6 (ENSMMSG00000022081) #13 BGLAP (ENSMMSG00000022141) #14 PMF1 (ENSMMSG00000022165) #15 SLC25A44 (ENSMMSG00000022189) #16 SEMA4A (ENSMMSG00000022204) #17 ENSMMSG00000022232 LMNA (ENSMMSG00000022290) #18 MEX3A (ENSMMSG00000022428) #19 RAB25 (ENSMMSG00000022435) #20 LAMTOR2 (ENSMMSG00000022447) #21 UBQLN4 (ENSMMSG00000022457) #22 SSR2 (ENSMMSG00000022486) #23 ARHGEF2 (ENSMMSG00000022532) #25 RXFP4 (ENSMMSG00000022594) KHDC4 (ENSMMSG00000022609) #26 RIT1 (ENSMMSG00000004820) #27 SYT11 (ENSMMSG00000004948) #28 ENSMMSG00000005075 #29 ENSMMSG00000006603 #29 MSTO1 (ENSMMSG00000006647) #30 DAP3 (ENSMMSG00000006783) #31 ASH1L (ENSMMSG00000006966) #32 RUSC1 (ENSMMSG00000007079) #33 FDPS (ENSMMSG00000007131) PKLR (ENSMMSG00000007243) #34 HCN3 (ENSMMSG00000007440) #35 Camelidae ANCESTRAL SPECIES 6 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Alpaca MODERN SPECIES 418 UBQLN4 (ENSVPAG00000003406) #22 ENSVPAG00000003405 #25 KHDC4 (ENSVPAG00000003404) #26 RIT1 (ENSVPAG00000003403) #27 ENSVPAG00000003397 #29 ENSVPAG00000003395 Arabian camel MODERN SPECIES 13 MEF2D (ENSCDRG00005012987) #7 RHBG (ENSCDRG00005012851) #8 TSACC (ENSCDRG00005012775) CCT3 (ENSCDRG00005012596) #9 GLMP (ENSCDRG00005012477) #10 TMEM79 (ENSCDRG00005012417) #11 SMG5 (ENSCDRG00005012076) #12 PAQR6 (ENSCDRG00005011936) #13 BGLAP (ENSCDRG00005011888) #14 SLC25A44 (ENSCDRG00005011792) #16 SEMA4A (ENSCDRG00005011665) #17 LMNA (ENSCDRG00005011469) #18 MEX3A (ENSCDRG00005011401) #19 RAB25 (ENSCDRG00005011364) #20 LAMTOR2 (ENSCDRG00005011283) #21 UBQLN4 (ENSCDRG00005011159) #22 SSR2 (ENSCDRG00005010971) #23 ARHGEF2 (ENSCDRG00005010064) #25 RXFP4 (ENSCDRG00005009989) ENSCDRG00005009887 RIT1 (ENSCDRG00005009734) #27 SYT11 (ENSCDRG00005009687) #28 MSTO1 (ENSCDRG00005009513) #30 ENSCDRG00005009473 #29 ENSCDRG00005009290 #29 DAP3 (ENSCDRG00005008986) #31 ENSCDRG00005008918 ASH1L (ENSCDRG00005008672) #32 RUSC1 (ENSCDRG00005008367) #33 FDPS (ENSCDRG00005008269) PKLR (ENSCDRG00005008136) #34 Suina ANCESTRAL SPECIES 8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00980000200110 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Pig MODERN SPECIES 12 RHBG (ENSSSCG00000035121) #8 TSACC (ENSSSCG00000006486) CCT3 (ENSSSCG00000006487) #9 GLMP (ENSSSCG00000006488) #10 TMEM79 (ENSSSCG00000006489) #11 SMG5 (ENSSSCG00000006490) #12 PAQR6 (ENSSSCG00000006491) #13 BGLAP (ENSSSCG00000055767) #14 PMF1 (ENSSSCG00000052919) SLC25A44 (ENSSSCG00000006494) #16 SEMA4A (ENSSSCG00000006495) #17 LMNA (ENSSSCG00000006496) #18 MEX3A (ENSSSCG00000006497) #19 RAB25 (ENSSSCG00000039186) #20 LAMTOR2 (ENSSSCG00000006499) #21 UBQLN4 (ENSSSCG00000006500) #22 SSR2 (ENSSSCG00000006501) #23 ARHGEF2 (ENSSSCG00000006502) #25 RXFP4 (ENSSSCG00000006503) KHDC4 (ENSSSCG00000006504) #26 RIT1 (ENSSSCG00000023991) #27 SYT11 (ENSSSCG00000006506) #28 ENSSSCG00000006510 #29 MSTO1 (ENSSSCG00000006157) #30 DAP3 (ENSSSCG00000006507) #31 ASH1L (ENSSSCG00000006508) #32 ENSSSCG00000040632 RUSC1 (ENSSSCG00000006511) #33 FDPS (ENSSSCG00000006512) PKLR (ENSSSCG00000026149) #34 HCN3 (ENSSSCG00000006518) #35 Chacoan peccary MODERN SPECIES 139 RHBG (ENSCWAG00000010166) #8 TSACC (ENSCWAG00000010146) CCT3 (ENSCWAG00000010037) #9 GLMP (ENSCWAG00000009920) #10 ENSCWAG00000009845 SMG5 (ENSCWAG00000009746) #12 PAQR6 (ENSCWAG00000009611) #13 BGLAP (ENSCWAG00000009559) #14 ENSCWAG00000009485 SLC25A44 (ENSCWAG00000009427) #16 SEMA4A (ENSCWAG00000009047) #17 LMNA (ENSCWAG00000008705) #18 MEX3A (ENSCWAG00000008643) #19 RAB25 (ENSCWAG00000008570) #20 LAMTOR2 (ENSCWAG00000008520) #21 UBQLN4 (ENSCWAG00000008403) #22 SSR2 (ENSCWAG00000008262) #23 ARHGEF2 (ENSCWAG00000007966) #25 ENSCWAG00000007912 KHDC4 (ENSCWAG00000007841) #26 RIT1 (ENSCWAG00000020995) #27 SYT11 (ENSCWAG00000020979) #28 ENSCWAG00000020896 #29 MSTO1 (ENSCWAG00000020845) #30 DAP3 (ENSCWAG00000020775) #31 ENSCWAG00000020755 ASH1L (ENSCWAG00000020727) #32 RUSC1 (ENSCWAG00000020663) #33 FDPS (ENSCWAG00000020618) PKLR (ENSCWAG00000020577) #34 HCN3 (ENSCWAG00000020562) #35 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Carnivora ANCESTRAL SPECIES 14 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Felidae ANCESTRAL SPECIES 11 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Cat MODERN SPECIES 248 RHBG (ENSFCAG00000011790) #8 TSACC (ENSFCAG00000029523) CCT3 (ENSFCAG00000011789) #9 GLMP (ENSFCAG00000011788) #10 TMEM79 (ENSFCAG00000011787) #11 SMG5 (ENSFCAG00000011783) #12 PAQR6 (ENSFCAG00000000759) #13 BGLAP (ENSFCAG00000048978) #14 PMF1 (ENSFCAG00000011781) #15 SLC25A44 (ENSFCAG00000011780) #16 SEMA4A (ENSFCAG00000011779) #17 LMNA (ENSFCAG00000011776) #18 MEX3A (ENSFCAG00000044236) #19 RAB25 (ENSFCAG00000011775) #20 LAMTOR2 (ENSFCAG00000028596) #21 UBQLN4 (ENSFCAG00000011772) #22 ENSFCAG00000050566 SSR2 (ENSFCAG00000043703) #23 ARHGEF2 (ENSFCAG00000030294) #25 KHDC4 (ENSFCAG00000012137) #26 RIT1 (ENSFCAG00000044860) #27 ENSFCAG00000037260 #27 SYT11 (ENSFCAG00000029675) #28 ENSFCAG00000012133 #29 MSTO1 (ENSFCAG00000030966) #30 DAP3 (ENSFCAG00000022787) #31 ASH1L (ENSFCAG00000012088) #32 RUSC1 (ENSFCAG00000024900) #33 FDPS (ENSFCAG00000039350) ENSFCAG00000047278 PKLR (ENSFCAG00000035883) #34 Panthera ANCESTRAL SPECIES 38 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 ENSGT00530000063335.B.a.a Tiger MODERN SPECIES 274 GPATCH4 (ENSPTIG00000006717) NAXE (ENSPTIG00000009667) TTC24 (ENSPTIG00000010925) IQGAP3 (ENSPTIG00000013068) RHBG (ENSPTIG00000015826) #8 TSACC (ENSPTIG00000016816) CCT3 (ENSPTIG00000018610) #9 GLMP (ENSPTIG00000004054) #10 TMEM79 (ENSPTIG00000007414) #11 SMG5 (ENSPTIG00000007892) #12 SLC25A44 (ENSPTIG00000011099) #16 SEMA4A (ENSPTIG00000016788) #17 ENSPTIG00000021888 #18 RAB25 (ENSPTIG00000022049) #20 LAMTOR2 (ENSPTIG00000022068) #21 UBQLN4 (ENSPTIG00000022083) #22 SSR2 (ENSPTIG00000022102) #23 ENSPTIG00000001215 #25 KHDC4 (ENSPTIG00000004498) #26 RIT1 (ENSPTIG00000007045) #27 SYT11 (ENSPTIG00000007723) #28 ENSPTIG00000007985 #29 ENSPTIG00000013227 #29 DAP3 (ENSPTIG00000015443) #31 ASH1L (ENSPTIG00000019713) #32 ENSPTIG00000008406 HCN3 (ENSPTIG00000009244) #35 CLK2 (ENSPTIG00000010873) #36 SCAMP3 (ENSPTIG00000011445) #37 ENSPTIG00000013508 GBA1 (ENSPTIG00000014359) Panthera_a ANCESTRAL SPECIES 37 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 ENSGT00530000063335.B.a.a leopard MODERN SPECIES 138 CCT3 (ENSPPRG00000008924) #9 GLMP (ENSPPRG00000010044) #10 TMEM79 (ENSPPRG00000011226) #11 SMG5 (ENSPPRG00000011901) #12 ENSPPRG00000012440 #13 PAQR6 (ENSPPRG00000013590) #13 BGLAP (ENSPPRG00000013703) #14 ENSPPRG00000015181 ENSPPRG00000016604 #16 ENSPPRG00000017448 #16 SEMA4A (ENSPPRG00000024539) #17 LMNA (ENSPPRG00000003442) #18 MEX3A (ENSPPRG00000006585) #19 RAB25 (ENSPPRG00000006611) #20 LAMTOR2 (ENSPPRG00000007518) #21 UBQLN4 (ENSPPRG00000008090) #22 SSR2 (ENSPPRG00000009542) #23 ARHGEF2 (ENSPPRG00000018064) #25 KHDC4 (ENSPPRG00000021149) #26 RIT1 (ENSPPRG00000000399) #27 SYT11 (ENSPPRG00000000652) #28 ENSPPRG00000008799 #29 DAP3 (ENSPPRG00000011800) #31 ENSPPRG00000011971 ASH1L (ENSPPRG00000014648) #32 ENSPPRG00000015592 #33 FDPS (ENSPPRG00000017484) PKLR (ENSPPRG00000019731) #34 HCN3 (ENSPPRG00000021359) #35 CLK2 (ENSPPRG00000023511) #36 SCAMP3 (ENSPPRG00000023077) #37 lion MODERN SPECIES 44 RHBG (ENSPLOG00000006433) #8 TSACC (ENSPLOG00000006484) CCT3 (ENSPLOG00000006587) #9 GLMP (ENSPLOG00000006693) #10 ENSPLOG00000006758 SMG5 (ENSPLOG00000006798) #12 PAQR6 (ENSPLOG00000006831) #13 BGLAP (ENSPLOG00000006890) #14 ENSPLOG00000006903 SLC25A44 (ENSPLOG00000006937) #16 SEMA4A (ENSPLOG00000006968) #17 LMNA (ENSPLOG00000007050) #18 MEX3A (ENSPLOG00000007367) #19 RAB25 (ENSPLOG00000007385) #20 LAMTOR2 (ENSPLOG00000007417) #21 UBQLN4 (ENSPLOG00000007496) #22 SSR2 (ENSPLOG00000007527) #23 ARHGEF2 (ENSPLOG00000007611) #25 KHDC4 (ENSPLOG00000007865) #26 RIT1 (ENSPLOG00000008053) #27 SYT11 (ENSPLOG00000008151) #28 ENSPLOG00000008203 #29 ENSPLOG00000008379 #31 ASH1L (ENSPLOG00000008458) #32 RUSC1 (ENSPLOG00000008579) #33 FDPS (ENSPLOG00000008651) PKLR (ENSPLOG00000008753) #34 HCN3 (ENSPLOG00000008852) #35 CLK2 (ENSPLOG00000008926) #36 SCAMP3 (ENSPLOG00000009300) #37 ENTREP3 (ENSPLOG00000009450) Caniformia ANCESTRAL SPECIES 10 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Canidae ANCESTRAL SPECIES 1 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917.f #37 Canis_lupus ANCESTRAL SPECIES 4 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917.f #37 Dog MODERN SPECIES 35 IQGAP3 (ENSCAFG00845008852) MEF2D (ENSCAFG00845009027) #7 RHBG (ENSCAFG00845009336) #8 CCT3 (ENSCAFG00845009435) #9 GLMP (ENSCAFG00845009558) #10 TMEM79 (ENSCAFG00845009619) #11 PAQR6 (ENSCAFG00845009665) #13 SMG5 (ENSCAFG00845009772) #12 BGLAP (ENSCAFG00845009909) #14 SLC25A44 (ENSCAFG00845009963) #16 SEMA4A (ENSCAFG00845010023) #17 LMNA (ENSCAFG00845010163) #18 MEX3A (ENSCAFG00845010291) #19 RAB25 (ENSCAFG00845010319) #20 LAMTOR2 (ENSCAFG00845010372) #21 UBQLN4 (ENSCAFG00845010456) #22 SSR2 (ENSCAFG00845010530) #23 ARHGEF2 (ENSCAFG00845010726) #25 KHDC4 (ENSCAFG00845011090) #26 RIT1 (ENSCAFG00845011170) #27 SYT11 (ENSCAFG00845011235) #28 ENSCAFG00845011319 #29 MSTO1 (ENSCAFG00845011422) #30 DAP3 (ENSCAFG00845011528) #31 ASH1L (ENSCAFG00845011740) #32 RUSC1 (ENSCAFG00845011825) #33 FDPS (ENSCAFG00845011910) PKLR (ENSCAFG00845012059) #34 HCN3 (ENSCAFG00845012249) #35 CLK2 (ENSCAFG00845012282) #36 SCAMP3 (ENSCAFG00845012373) #37 Dingo MODERN SPECIES 271 RHBG (ENSCAFG00020005431) #8 TSACC (ENSCAFG00020005438) CCT3 (ENSCAFG00020005487) #9 GLMP (ENSCAFG00020006053) #10 TMEM79 (ENSCAFG00020006056) #11 SMG5 (ENSCAFG00020006061) #12 PAQR6 (ENSCAFG00020006075) #13 BGLAP (ENSCAFG00020006091) #14 ENSCAFG00020006096 SLC25A44 (ENSCAFG00020006099) #16 SEMA4A (ENSCAFG00020006101) #17 LMNA (ENSCAFG00020006147) #18 MEX3A (ENSCAFG00020006171) #19 RAB25 (ENSCAFG00020006179) #20 ENSCAFG00020006183 #21 UBQLN4 (ENSCAFG00020006198) #22 SSR2 (ENSCAFG00020006268) #23 ARHGEF2 (ENSCAFG00020006291) #25 KHDC4 (ENSCAFG00020006317) #26 RIT1 (ENSCAFG00020006481) #27 SYT11 (ENSCAFG00020006484) #28 ENSCAFG00020006650 #29 MSTO1 (ENSCAFG00020006658) #30 DAP3 (ENSCAFG00020006662) #31 ASH1L (ENSCAFG00020006713) #32 ENSCAFG00020006949 #33 FDPS (ENSCAFG00020006959) PKLR (ENSCAFG00020006996) #34 HCN3 (ENSCAFG00020007064) #35 CLK2 (ENSCAFG00020007098) #36 ENSCAFG00020007113 #37 Red fox MODERN SPECIES 23 ENSVVUG00000005925 CCT3 (ENSVVUG00000005916) #9 GLMP (ENSVVUG00000005893) #10 TMEM79 (ENSVVUG00000005892) #11 SMG5 (ENSVVUG00000005887) #12 PAQR6 (ENSVVUG00000005883) #13 BGLAP (ENSVVUG00000005877) #14 ENSVVUG00000005870 SLC25A44 (ENSVVUG00000005863) #16 ENSVVUG00000005856 #17 ENSVVUG00000005853 #17 LMNA (ENSVVUG00000005843) #18 MEX3A (ENSVVUG00000005834) #19 RAB25 (ENSVVUG00000005821) #20 LAMTOR2 (ENSVVUG00000005816) #21 UBQLN4 (ENSVVUG00000005763) #22 SSR2 (ENSVVUG00000005756) #23 ARHGEF2 (ENSVVUG00000005746) #25 KHDC4 (ENSVVUG00000005679) #26 RIT1 (ENSVVUG00000005671) #27 SYT11 (ENSVVUG00000005667) #28 ENSVVUG00000004239 #29 MSTO1 (ENSVVUG00000004113) #30 DAP3 (ENSVVUG00000004090) #31 ASH1L (ENSVVUG00000004069) #32 RUSC1 (ENSVVUG00000004055) #33 FDPS (ENSVVUG00000004041) PKLR (ENSVVUG00000003930) #34 HCN3 (ENSVVUG00000003915) #35 CLK2 (ENSVVUG00000003884) #36 FAM189B (ENSVVUG00000003865) Caniformia_b ANCESTRAL SPECIES 8 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Ursidae ANCESTRAL SPECIES 4 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125.d #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.f #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.p ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Ursus ANCESTRAL SPECIES 72 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125.d #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.f #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.p ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 American black bear MODERN SPECIES 23 ENSUAMG00000015696 #21 UBQLN4 (ENSUAMG00000015695) #22 SSR2 (ENSUAMG00000015694) #23 ARHGEF2 (ENSUAMG00000013991) #25 KHDC4 (ENSUAMG00000013863) #26 RIT1 (ENSUAMG00000013852) #27 SYT11 (ENSUAMG00000013841) #28 ENSUAMG00000013830 #29 ENSUAMG00000013828 #29 ENSUAMG00000013824 #29 DAP3 (ENSUAMG00000013808) #31 Polar bear MODERN SPECIES 200 IQGAP3 (ENSUMAG00000017820) MEF2D (ENSUMAG00000017857) #7 RHBG (ENSUMAG00000017948) #8 TSACC (ENSUMAG00000017979) CCT3 (ENSUMAG00000017983) #9 GLMP (ENSUMAG00000017987) #10 SMG5 (ENSUMAG00000018041) #12 ENSUMAG00000018331 BGLAP (ENSUMAG00000018334) #14 ENSUMAG00000018338 SLC25A44 (ENSUMAG00000018341) #16 SEMA4A (ENSUMAG00000018344) #17 LMNA (ENSUMAG00000018354) #18 RAB25 (ENSUMAG00000018376) #20 ENSUMAG00000018379 ENSUMAG00000018385 #22 SSR2 (ENSUMAG00000018391) #23 ARHGEF2 (ENSUMAG00000018398) #25 KHDC4 (ENSUMAG00000018427) #26 RIT1 (ENSUMAG00000018455) #27 SYT11 (ENSUMAG00000018466) #28 ENSUMAG00000018608 #29 MSTO1 (ENSUMAG00000019384) #30 DAP3 (ENSUMAG00000019443) #31 ENSUMAG00000019450 #32 ASH1L (ENSUMAG00000019455) #32 FDPS (ENSUMAG00000019468) ENSUMAG00000019472 #34 HCN3 (ENSUMAG00000019475) #35 CLK2 (ENSUMAG00000019495) #36 SCAMP3 (ENSUMAG00000019504) #37 Mustelinae ANCESTRAL SPECIES 23 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074.m ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Ferret MODERN SPECIES 441 RHBG (ENSMPUG00000004385) #8 TSACC (ENSMPUG00000004391) CCT3 (ENSMPUG00000004401) #9 GLMP (ENSMPUG00000004537) #10 TMEM79 (ENSMPUG00000004531) #11 SMG5 (ENSMPUG00000004546) #12 PAQR6 (ENSMPUG00000004566) #13 BGLAP (ENSMPUG00000004628) #14 PMF1 (ENSMPUG00000004672) #15 SLC25A44 (ENSMPUG00000004717) #16 SEMA4A (ENSMPUG00000004742) #17 LMNA (ENSMPUG00000004761) #18 MEX3A (ENSMPUG00000004774) #19 RAB25 (ENSMPUG00000004790) #20 LAMTOR2 (ENSMPUG00000004826) #21 UBQLN4 (ENSMPUG00000004855) #22 SSR2 (ENSMPUG00000004963) #23 ARHGEF2 (ENSMPUG00000005016) #25 KHDC4 (ENSMPUG00000005186) #26 RIT1 (ENSMPUG00000005245) #27 SYT11 (ENSMPUG00000005268) #28 ENSMPUG00000005274 #29 MSTO1 (ENSMPUG00000005298) #30 DAP3 (ENSMPUG00000005314) #31 ASH1L (ENSMPUG00000005465) #32 ENSMPUG00000005484 #33 ENSMPUG00000005496 PKLR (ENSMPUG00000005509) #34 HCN3 (ENSMPUG00000005526) #35 CLK2 (ENSMPUG00000005543) #36 ENTREP3 (ENSMPUG00000005565) American mink MODERN SPECIES 260 ENSNVIG00000020791 #7 RHBG (ENSNVIG00000020780) #8 TSACC (ENSNVIG00000020774) CCT3 (ENSNVIG00000020748) #9 GLMP (ENSNVIG00000020700) #10 ENSNVIG00000020679 SMG5 (ENSNVIG00000020654) #12 ENSNVIG00000020635 #13 BGLAP (ENSNVIG00000020619) #14 ENSNVIG00000020609 SLC25A44 (ENSNVIG00000020603) #16 SEMA4A (ENSNVIG00000020558) #17 LMNA (ENSNVIG00000020473) #18 RAB25 (ENSNVIG00000020433) #20 LAMTOR2 (ENSNVIG00000020427) #21 UBQLN4 (ENSNVIG00000020416) #22 SSR2 (ENSNVIG00000020385) #23 ARHGEF2 (ENSNVIG00000020356) #25 ENSNVIG00000020342 #26 RIT1 (ENSNVIG00000020272) #27 SYT11 (ENSNVIG00000020257) #28 ENSNVIG00000019964 #29 MSTO1 (ENSNVIG00000019933) #30 DAP3 (ENSNVIG00000019822) #31 ASH1L (ENSNVIG00000019642) #32 ENSNVIG00000019622 ##33 FDPS (ENSNVIG00000019613) PKLR (ENSNVIG00000019507) #34 HCN3 (ENSNVIG00000019481) #35 CLK2 (ENSNVIG00000019445) #36 SCAMP3 (ENSNVIG00000019433) #37 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Equus ANCESTRAL SPECIES 3 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 ENSGT00940000160917 #37 Horse MODERN SPECIES 26 ENSECAG00000053296 MEF2D (ENSECAG00000020356) #7 RHBG (ENSECAG00000013494) #8 TSACC (ENSECAG00000020624) CCT3 (ENSECAG00000020633) #9 GLMP (ENSECAG00000024928) #10 TMEM79 (ENSECAG00000001165) #11 SMG5 (ENSECAG00000001389) #12 ENSECAG00000005938 SLC25A44 (ENSECAG00000007577) #16 SEMA4A (ENSECAG00000008622) #17 LMNA (ENSECAG00000011097) #18 MEX3A (ENSECAG00000007279) #19 RAB25 (ENSECAG00000023191) #20 LAMTOR2 (ENSECAG00000009193) #21 UBQLN4 (ENSECAG00000009993) #22 SSR2 (ENSECAG00000013740) #23 ARHGEF2 (ENSECAG00000013759) #25 KHDC4 (ENSECAG00000011569) #26 RIT1 (ENSECAG00000015714) #27 ENSECAG00000019775 #29 SYT11 (ENSECAG00000019725) #28 MSTO1 (ENSECAG00000008798) #30 DAP3 (ENSECAG00000016401) #31 ENSECAG00000049880 ASH1L (ENSECAG00000018527) #32 RUSC1 (ENSECAG00000023262) #33 FDPS (ENSECAG00000039158) PKLR (ENSECAG00000013836) #34 HCN3 (ENSECAG00000019972) #35 CLK2 (ENSECAG00000049239) #36 Donkey MODERN SPECIES 17 MEF2D (ENSEASG00005019100) #7 RHBG (ENSEASG00005019109) #8 TSACC (ENSEASG00005019110) CCT3 (ENSEASG00005019113) #9 GLMP (ENSEASG00005019116) #10 TMEM79 (ENSEASG00005019119) #11 SMG5 (ENSEASG00005019122) #12 PAQR6 (ENSEASG00005019125) #13 ENSEASG00005019127 #14 SLC25A44 (ENSEASG00005019128) #16 SEMA4A (ENSEASG00005019129) #17 LMNA (ENSEASG00005019130) #18 MEX3A (ENSEASG00005031469) #19 RAB25 (ENSEASG00005019133) #20 LAMTOR2 (ENSEASG00005031172) #21 UBQLN4 (ENSEASG00005019135) #22 SSR2 (ENSEASG00005019136) #23 ARHGEF2 (ENSEASG00005019138) #25 KHDC4 (ENSEASG00005019143) #26 RIT1 (ENSEASG00005019149) #27 SYT11 (ENSEASG00005019151) #28 ENSEASG00005019154 #29 ENSEASG00005019163 #30 DAP3 (ENSEASG00005019165) #31 ENSEASG00005024932 ENSEASG00005019185 #32 ENSEASG00005010484 ENSEASG00005010486 ENSEASG00005030134 ENSEASG00005019246 ENSEASG00005019243 #33 Chiroptera ANCESTRAL SPECIES 20 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Megabat MODERN SPECIES 3199 MEX3A (ENSPVAG00000010333) #19 RAB25 (ENSPVAG00000010331) #20 LAMTOR2 (ENSPVAG00000010328) #21 UBQLN4 (ENSPVAG00000010326) #22 SSR2 (ENSPVAG00000010325) #23 ARHGEF2 (ENSPVAG00000010324) #25 RXFP4 (ENSPVAG00000010323) KHDC4 (ENSPVAG00000010322) #26 RIT1 (ENSPVAG00000010321) #27 SYT11 (ENSPVAG00000010320) #28 ENSPVAG00000010318 #29 ENSPVAG00000010316 Microchiroptera ANCESTRAL SPECIES 21 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Greater horseshoe bat MODERN SPECIES 14 RHBG (ENSRFEG00010010915) #8 TSACC (ENSRFEG00010010848) CCT3 (ENSRFEG00010010707) #9 GLMP (ENSRFEG00010016041) #10 TMEM79 (ENSRFEG00010015938) #11 SMG5 (ENSRFEG00010015872) #12 PAQR6 (ENSRFEG00010015723) #13 BGLAP (ENSRFEG00010015652) #14 PMF1 (ENSRFEG00010015555) #15 SLC25A44 (ENSRFEG00010015502) #16 SEMA4A (ENSRFEG00010015377) #17 LMNA (ENSRFEG00010015236) #18 MEX3A (ENSRFEG00010015157) #19 RAB25 (ENSRFEG00010015038) #20 ENSRFEG00010014949 #21 UBQLN4 (ENSRFEG00010014900) #22 SSR2 (ENSRFEG00010014692) #23 ARHGEF2 (ENSRFEG00010014408) #25 RXFP4 (ENSRFEG00010014369) KHDC4 (ENSRFEG00010014273) #26 RIT1 (ENSRFEG00010014140) #27 SYT11 (ENSRFEG00010014057) #28 ENSRFEG00010013759 #29 MSTO1 (ENSRFEG00010013673) #30 DAP3 (ENSRFEG00010013351) #31 ASH1L (ENSRFEG00010013223) #32 RUSC1 (ENSRFEG00010013073) #33 FDPS (ENSRFEG00010012958) PKLR (ENSRFEG00010012731) #34 HCN3 (ENSRFEG00010012686) #35 CLK2 (ENSRFEG00010012197) #36 Microbat DUPLICATION Microbat MODERN SPECIES 1610 ENSMLUG00000002182 #22 HSPA8 (ENSMLUG00000004834) CLMP (ENSMLUG00000014150) Microbat MODERN SPECIES 1148 ENSMLUG00000030150 RHBG (ENSMLUG00000008585) #8 CCT3 (ENSMLUG00000015678) #9 GLMP (ENSMLUG00000008556) #10 TMEM79 (ENSMLUG00000008551) #11 SMG5 (ENSMLUG00000008518) #12 PAQR6 (ENSMLUG00000008500) #13 BGLAP (ENSMLUG00000029723) #14 PMF1 (ENSMLUG00000008489) #15 SLC25A44 (ENSMLUG00000008481) #16 SEMA4A (ENSMLUG00000000639) #17 LMNA (ENSMLUG00000026412) #18 MEX3A (ENSMLUG00000010185) #19 RAB25 (ENSMLUG00000010153) #20 ENSMLUG00000023871 #21 UBQLN4 (ENSMLUG00000010131) #22 SSR2 (ENSMLUG00000010102) #23 ARHGEF2 (ENSMLUG00000010039) #25 RXFP4 (ENSMLUG00000010023) KHDC4 (ENSMLUG00000009967) #26 RIT1 (ENSMLUG00000009935) #27 SYT11 (ENSMLUG00000009918) #28 ENSMLUG00000009868 #29 MSTO1 (ENSMLUG00000009855) #30 DAP3 (ENSMLUG00000005848) #31 ASH1L (ENSMLUG00000013461) #32 RUSC1 (ENSMLUG00000013446) #33 PKLR (ENSMLUG00000013422) #34 HCN3 (ENSMLUG00000013418) #35 CLK2 (ENSMLUG00000013410) #36 SCAMP3 (ENSMLUG00000013402) #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155620 #22 Hedgehog MODERN SPECIES 5581 ENSEEUG00000013440 #22 Common shrew MODERN SPECIES 4147 ENSSARG00000013420 #22 Atlantogenata ANCESTRAL SPECIES 15 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Xenarthra ANCESTRAL SPECIES 37 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000164230 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 Armadillo DUPLICATION Armadillo MODERN SPECIES 1939 ENSDNOG00000035727 #17 LMNA (ENSDNOG00000010869) #18 ENSDNOG00000037981 #19 RAB25 (ENSDNOG00000039155) #20 LAMTOR2 (ENSDNOG00000017068) #21 ENSDNOG00000017067 #22 SSR2 (ENSDNOG00000017062) #23 Armadillo MODERN SPECIES 362 ENSDNOG00000009096 YES1 (ENSDNOG00000017741) ENOSF1 (ENSDNOG00000017739) ENSDNOG00000036496 #22 TYMS (ENSDNOG00000045272) CLUL1 (ENSDNOG00000037140) CETN1 (ENSDNOG00000049655) COLEC12 (ENSDNOG00000000800) Sloth MODERN SPECIES 4772 ENSCHOG00000002163 #22 Afrotheria ANCESTRAL SPECIES 36 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Tenrec DUPLICATION Tenrec MODERN SPECIES 5184 ENSETEG00000005548 #20 LAMTOR2 (ENSETEG00000005546) #21 ENSETEG00000005543 #22 Tenrec MODERN SPECIES 6808 ENSETEG00000017273 #22 Afrotheria_a ANCESTRAL SPECIES 37 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256 #29 ENSGT00530000064067 #30 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Elephant MODERN SPECIES 325 MEF2D (ENSLAFG00000015564) #7 RHBG (ENSLAFG00000005397) #8 TSACC (ENSLAFG00000005393) CCT3 (ENSLAFG00000005391) #9 GLMP (ENSLAFG00000005387) #10 TMEM79 (ENSLAFG00000027928) #11 SMG5 (ENSLAFG00000006241) #12 PAQR6 (ENSLAFG00000026867) #13 BGLAP (ENSLAFG00000016824) #14 PMF1 (ENSLAFG00000025558) #15 SEMA4A (ENSLAFG00000002834) #17 LMNA (ENSLAFG00000002832) #18 MEX3A (ENSLAFG00000009220) #19 RAB25 (ENSLAFG00000009222) #20 LAMTOR2 (ENSLAFG00000029041) #21 UBQLN4 (ENSLAFG00000011221) #22 SSR2 (ENSLAFG00000011219) #23 SLC25A44 (ENSLAFG00000022753) #16 ARHGEF2 (ENSLAFG00000011210) #25 RXFP4 (ENSLAFG00000011205) KHDC4 (ENSLAFG00000014971) #26 RIT1 (ENSLAFG00000014967) #27 SYT11 (ENSLAFG00000030067) #28 ENSLAFG00000005205 #29 MSTO1 (ENSLAFG00000006224) #30 DAP3 (ENSLAFG00000005200) #31 ASH1L (ENSLAFG00000002197) #32 RUSC1 (ENSLAFG00000029910) #33 PKLR (ENSLAFG00000003270) #34 HCN3 (ENSLAFG00000003265) #35 CLK2 (ENSLAFG00000022844) #36 Hyrax MODERN SPECIES 4408 RAB25 (ENSPCAG00000014579) #20 LAMTOR2 (ENSPCAG00000014566) #21 ENSPCAG00000014497 #22 Marsupialia ANCESTRAL SPECIES 3 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.a #29 ENSGT00530000064067 #30 ENSGT00390000016256.b #29 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.a #29 ENSGT00530000064067 #30 ENSGT00390000016256.b #29 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Diprotodontia ANCESTRAL SPECIES 30 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.a #29 ENSGT00530000064067 #30 ENSGT00390000016256.b #29 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Wallaby MODERN SPECIES 6522 RAB25 (ENSMEUG00000016598) #20 LAMTOR2 (ENSMEUG00000016588) #21 UBQLN4 (ENSMEUG00000016573) #22 Diprotodontia_a ANCESTRAL SPECIES 28 ENSGT00950000182844.b.b.a #8 ENSGT00390000012524 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290 #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #25 ENSGT00510000047412.a #26 ENSGT00940000160132 #27 ENSGT00940000159088 #28 ENSGT00390000016256.a #29 ENSGT00530000064067 #30 ENSGT00390000016256.b #29 ENSGT00390000015248 #31 ENSGT00940000156698 #32 ENSGT00900000141033.b.b #33 ENSGT00900000141074 ENSGT00390000008859.b.c #34 ENSGT00940000162023 #35 ENSGT00940000154947 #36 Common wonbat MODERN SPECIES 1035 RHBG (ENSVURG00010014362) #8 ENSVURG00010014387 CCT3 (ENSVURG00010014395) #9 GLMP (ENSVURG00010014413) #10 TMEM79 (ENSVURG00010014422) #11 SMG5 (ENSVURG00010014439) #12 PAQR6 (ENSVURG00010014505) #13 BGLAP (ENSVURG00010014520) #14 PMF1 (ENSVURG00010014537) #15 SLC25A44 (ENSVURG00010014546) #16 SEMA4A (ENSVURG00010014559) #17 LMNA (ENSVURG00010014586) #18 MEX3A (ENSVURG00010014622) #19 RAB25 (ENSVURG00010014628) #20 LAMTOR2 (ENSVURG00010014640) #21 UBQLN4 (ENSVURG00010014662) #22 SSR2 (ENSVURG00010014748) #23 ARHGEF2 (ENSVURG00010014790) #25 ENSVURG00010014832 KHDC4 (ENSVURG00010014857) #26 RIT1 (ENSVURG00010014864) #27 SYT11 (ENSVURG00010014876) #28 ENSVURG00010014888 #29 MSTO1 (ENSVURG00010014920) #30 ENSVURG00010014937 ENSVURG00010014951 #29 ENSVURG00010014964 #31 ASH1L (ENSVURG00010014983) #32 RUSC1 (ENSVURG00010015034) #33 FDPS (ENSVURG00010015053) ENSVURG00010015094 #34 koala MODERN SPECIES 42 MEF2D (ENSPCIG00000024228) #7 RHBG (ENSPCIG00000018705) #8 TSACC (ENSPCIG00000018932) CCT3 (ENSPCIG00000018933) #9 GLMP (ENSPCIG00000018935) #10 TMEM79 (ENSPCIG00000018937) #11 SMG5 (ENSPCIG00000018938) #12 PAQR6 (ENSPCIG00000018944) #13 PMF1 (ENSPCIG00000018946) #15 SLC25A44 (ENSPCIG00000018947) #16 SEMA4A (ENSPCIG00000018948) #17 LMNA (ENSPCIG00000018949) #18 MEX3A (ENSPCIG00000018950) #19 RAB25 (ENSPCIG00000018951) #20 LAMTOR2 (ENSPCIG00000018952) #21 UBQLN4 (ENSPCIG00000018959) #22 SSR2 (ENSPCIG00000019065) #23 ARHGEF2 (ENSPCIG00000019069) #25 KHDC4 (ENSPCIG00000019084) #26 RIT1 (ENSPCIG00000019094) #27 SYT11 (ENSPCIG00000036428) #28 ENSPCIG00000031923 #29 ENSPCIG00000019134 #29 MSTO1 (ENSPCIG00000021688) #30 ENSPCIG00000035411 ENSPCIG00000021691 #29 DAP3 (ENSPCIG00000021692) #31 ASH1L (ENSPCIG00000021694) #32 RUSC1 (ENSPCIG00000021696) #33 FDPS (ENSPCIG00000021697) PKLR (ENSPCIG00000021699) #34 Tasmanian devil MODERN SPECIES 3 RHBG (ENSSHAG00000014508) #8 TSACC (ENSSHAG00000024448) CCT3 (ENSSHAG00000014346) #9 ENSSHAG00000014320 #10 TMEM79 (ENSSHAG00000014298) #11 SMG5 (ENSSHAG00000014163) #12 PAQR6 (ENSSHAG00000014101) #13 BGLAP (ENSSHAG00000022571) #14 PMF1 (ENSSHAG00000013991) #15 SLC25A44 (ENSSHAG00000023169) #16 SEMA4A (ENSSHAG00000013803) #17 LMNA (ENSSHAG00000013712) #18 MEX3A (ENSSHAG00000032241) #19 RAB25 (ENSSHAG00000013327) #20 LAMTOR2 (ENSSHAG00000013314) #21 UBQLN4 (ENSSHAG00000013254) #22 ENSSHAG00000012964 #23 ARHGEF2 (ENSSHAG00000020979) #25 KHDC4 (ENSSHAG00000012665) #26 RIT1 (ENSSHAG00000012524) #27 ENSSHAG00000012239 #28 ENSSHAG00000011779 #29 ENSSHAG00000011742 #30 ENSSHAG00000030016 ENSSHAG00000011327 #29 ENSSHAG00000028324 #31 ASH1L (ENSSHAG00000009472) #32 RUSC1 (ENSSHAG00000026915) #33 FDPS (ENSSHAG00000009077) PKLR (ENSSHAG00000008590) #34 HCN3 (ENSSHAG00000008495) #35 Opossum MODERN SPECIES 1 RHBG (ENSMODG00000016867) #8 TSACC (ENSMODG00000016872) CCT3 (ENSMODG00000016883) #9 GLMP (ENSMODG00000016888) #10 TMEM79 (ENSMODG00000016892) #11 SMG5 (ENSMODG00000016901) #12 PAQR6 (ENSMODG00000016910) #13 ENSMODG00000016914 #14 PMF1 (ENSMODG00000016918) #15 SLC25A44 (ENSMODG00000016921) #16 SEMA4A (ENSMODG00000016928) #17 LMNA (ENSMODG00000016946) #18 MEX3A (ENSMODG00000016954) #19 RAB25 (ENSMODG00000048622) #20 LAMTOR2 (ENSMODG00000016959) #21 UBQLN4 (ENSMODG00000016961) #22 SSR2 (ENSMODG00000016964) #23 ARHGEF2 (ENSMODG00000016970) #25 KHDC4 (ENSMODG00000016981) #26 RIT1 (ENSMODG00000016989) #27 SYT11 (ENSMODG00000016994) #28 ENSMODG00000017006 #29 MSTO1 (ENSMODG00000017015) #30 ENSMODG00000025668 #29 DAP3 (ENSMODG00000017024) #31 ASH1L (ENSMODG00000017033) #32 RUSC1 (ENSMODG00000017044) #33 ENSMODG00000042246 PKLR (ENSMODG00000017053) #34 HCN3 (ENSMODG00000017060) #35 ENSMODG00000047191 #36 Platypus MODERN SPECIES 88 MEF2D (ENSOANG00000049864) #7 ENSOANG00000046848 CCT3 (ENSOANG00000003511) #9 GLMP (ENSOANG00000031128) #10 SMG5 (ENSOANG00000048288) #12 ENSOANG00000036654 ENSOANG00000050835 #15 SLC25A44 (ENSOANG00000043363) #16 SEMA4A (ENSOANG00000009659) #17 LMNA (ENSOANG00000012813) #18 ENSOANG00000041083 ENSOANG00000048604 MEX3A (ENSOANG00000039670) #19 RAB25 (ENSOANG00000036213) #20 ENSOANG00000039502 #21 UBQLN4 (ENSOANG00000040199) #22 SSR2 (ENSOANG00000041072) #23 ARHGEF2 (ENSOANG00000047409) #25 KHDC4 (ENSOANG00000031515) #26 SYT11 (ENSOANG00000042253) #28 ENSOANG00000049330 #29 ENSOANG00000042137 DAP3 (ENSOANG00000031925) #31 ENSOANG00000043091 #33 FDPS (ENSOANG00000051014) PKLR (ENSOANG00000044012) #34 CLK2 (ENSOANG00000049819) #36 SCAMP3 (ENSOANG00000037835) #37 ENTREP3 (ENSOANG00000038845) ENSOANG00000038919 ENSOANG00000050057 Sauria ANCESTRAL SPECIES 28 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Lepidosauria ANCESTRAL SPECIES 36 ENSGT00940000158341 #25 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 Episquamata ANCESTRAL SPECIES 33 ENSGT00410000026290.i #14 ENSGT00940000167298 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000165651 ENSGT00900000141164 Laterata ANCESTRAL SPECIES 79 ENSGT00410000026290.i #14 ENSGT00940000167298 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 Common wall lizard MODERN SPECIES 7 ENSPMRG00000017721 VANGL2 (ENSPMRG00000017711) ENSPMRG00000017706 ENSPMRG00000017700 PMF1 (ENSPMRG00000017696) #15 SLC25A44 (ENSPMRG00000017691) #16 ENSPMRG00000017683 #17 ENSPMRG00000017669 #17 ENSPMRG00000017660 #17 LMNA (ENSPMRG00000017646) #18 MEX3A (ENSPMRG00000017636) #19 ENSPMRG00000017630 ENSPMRG00000017624 RAB25 (ENSPMRG00000017595) #20 LAMTOR2 (ENSPMRG00000017582) #21 UBQLN4 (ENSPMRG00000017572) #22 ENSPMRG00000017565 ENSPMRG00000017551 ENSPMRG00000017541 ENSPMRG00000017535 ENSPMRG00000017525 ENSPMRG00000017521 ENSPMRG00000017511 ENSPMRG00000017504 NAXE (ENSPMRG00000017502) GPATCH4 (ENSPMRG00000017498) ENSPMRG00000017496 ENSPMRG00000017492 TTC24 (ENSPMRG00000017485) IQGAP3 (ENSPMRG00000017460) MEF2D (ENSPMRG00000017436) #7 Argentine black and white tegu MODERN SPECIES 150 COPA (ENSSMRG00000017553) NCSTN (ENSSMRG00000017550) NHLH1 (ENSSMRG00000017548) ENSSMRG00000017546 VANGL2 (ENSSMRG00000017543) ENSSMRG00000017540 #14 ENSSMRG00000017539 SLC25A44 (ENSSMRG00000017536) #16 SEMA4A (ENSSMRG00000017533) #17 LMNA (ENSSMRG00000017530) #18 MEX3A (ENSSMRG00000017529) #19 ENSSMRG00000017528 RAB25 (ENSSMRG00000017527) #20 LAMTOR2 (ENSSMRG00000017526) #21 UBQLN4 (ENSSMRG00000017524) #22 MEF2D (ENSSMRG00000017410) #7 IQGAP3 (ENSSMRG00000015869) ENSSMRG00000015868 NAXE (ENSSMRG00000015867) GPATCH4 (ENSSMRG00000015866) HAPLN2 (ENSSMRG00000015864) BCAN (ENSSMRG00000015863) ENSSMRG00000015861 PC (ENSSMRG00000015860) LGALS12 (ENSSMRG00000015858) ENSSMRG00000015856 #10 CCT3 (ENSSMRG00000015855) #9 Toxicofera ANCESTRAL SPECIES 61 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000162622 ENSGT00940000162770.p.b ENSGT00390000012496.b ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 Elapidae ANCESTRAL SPECIES 41 ENSGT00940000155451.s ENSGT00390000014633 ENSGT00940000162622 ENSGT00940000162770.p.b ENSGT00390000012496.b ENSGT01020000230359.A ENSGT00960000192439.a ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.c.a ENSGT00940000157343.c.b ENSGT00940000165651 ENSGT00900000141164 Elapidae_a ANCESTRAL SPECIES 94 ENSGT00390000018613.b ENSGT00640000091486.a ENSGT00510000048151 ENSGT00940000155451.s ENSGT00390000014633 ENSGT00940000162622 ENSGT00940000162770.p.b ENSGT00390000012496.b ENSGT01020000230359.A ENSGT00960000192439.a ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.c.a ENSGT00940000157343.c.b ENSGT00940000165651 ENSGT00900000141164 Acanthophiinae ANCESTRAL SPECIES 81 ENSGT00640000091486.a ENSGT00510000048151 ENSGT00940000155451.s ENSGT00390000014633 ENSGT00940000162622 ENSGT00940000162770.p.b ENSGT00390000012496.b ENSGT01020000230359.A ENSGT00960000192439.a ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000163126 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.c.a ENSGT00940000157343.c.b ENSGT00940000165651 ENSGT00900000141164 Eastern brown snake MODERN SPECIES 96 NCSTN (ENSPTXG00000016406) NHLH1 (ENSPTXG00000016409) ENSPTXG00000016411 VANGL2 (ENSPTXG00000016413) CX3CR1 (ENSPTXG00000016417) ENSPTXG00000016419 ENSPTXG00000016422 ENSPTXG00000016424 ENSPTXG00000016426 LMNA (ENSPTXG00000016432) #18 MEX3A (ENSPTXG00000016434) #19 ENSPTXG00000016437 ENSPTXG00000016439 RAB25 (ENSPTXG00000016440) #20 LAMTOR2 (ENSPTXG00000016441) #21 UBQLN4 (ENSPTXG00000016442) #22 IQGAP3 (ENSPTXG00000016444) MEF2D (ENSPTXG00000016452) #7 RHBG (ENSPTXG00000016463) #8 HAPLN2 (ENSPTXG00000016465) ENSPTXG00000016467 ENSPTXG00000016468 PC (ENSPTXG00000016469) ENSPTXG00000016488 ENSPTXG00000016490 ATG2A (ENSPTXG00000016494) ENSPTXG00000016498 PPP2R5B (ENSPTXG00000016501) GPHA2 (ENSPTXG00000016503) ENSPTXG00000016505 SNX15 (ENSPTXG00000016507) Mainland tiger snake MODERN SPECIES 265 MEX3A (ENSNSUG00000002275) #19 ENSNSUG00000002265 LAMTOR2 (ENSNSUG00000002262) #21 UBQLN4 (ENSNSUG00000002251) #22 NAXE (ENSNSUG00000002248) ENSNSUG00000002240 ENSNSUG00000002233 MEF2D (ENSNSUG00000002226) #7 RHBG (ENSNSUG00000002224) #8 HAPLN2 (ENSNSUG00000002218) ENSNSUG00000002214 ENSNSUG00000002213 ENSNSUG00000002208 PC (ENSNSUG00000002123) ENSNSUG00000002120 ATG2A (ENSNSUG00000002057) ENSNSUG00000002041 PPP2R5B (ENSNSUG00000000357) GPHA2 (ENSNSUG00000000347) Blue-lipped sea krait MODERN SPECIES 2466 MEX3A (ENSLLTG00000006498) #19 ENSLLTG00000006480 RAB25 (ENSLLTG00000006465) #20 LAMTOR2 (ENSLLTG00000006447) #21 UBQLN4 (ENSLLTG00000006421) #22 NAXE (ENSLLTG00000006407) IQGAP3 (ENSLLTG00000001258) Indian cobra MODERN SPECIES 17 ENSNNAG00000018951 CX3CR1 (ENSNNAG00000018948) ENSNNAG00000018946 ENSNNAG00000018945 ENSNNAG00000018941 ENSNNAG00000018936 BGLAP (ENSNNAG00000018931) #14 SLC25A44 (ENSNNAG00000018928) #16 SEMA4A (ENSNNAG00000018920) #17 LMNA (ENSNNAG00000018915) #18 MEX3A (ENSNNAG00000018913) #19 ENSNNAG00000018909 ENSNNAG00000018907 RAB25 (ENSNNAG00000018902) #20 LAMTOR2 (ENSNNAG00000018899) #21 UBQLN4 (ENSNNAG00000018894) #22 NAXE (ENSNNAG00000018884) IQGAP3 (ENSNNAG00000018874) MEF2D (ENSNNAG00000018857) #7 HAPLN2 (ENSNNAG00000018844) ENSNNAG00000018839 ENSNNAG00000018829 RHBG (ENSNNAG00000018811) #8 ENSNNAG00000018804 ENSNNAG00000018802 ENSNNAG00000018800 PC (ENSNNAG00000018779) ENSNNAG00000018776 SCYL1 (ENSNNAG00000018772) ATG2A (ENSNNAG00000018767) SMG5 (ENSNNAG00000018751) #12 tuatara MODERN SPECIES 1930 ARHGEF2 (ENSSPUG00000002103) #25 SSR2 (ENSSPUG00000002144) #23 CCT3 (ENSSPUG00000002180) #9 GLMP (ENSSPUG00000002191) #10 TMEM79 (ENSSPUG00000002207) #11 SMG5 (ENSSPUG00000002260) #12 PAQR6 (ENSSPUG00000002286) #13 PMF1 (ENSSPUG00000002356) #15 SLC25A44 (ENSSPUG00000002391) #16 SEMA4A (ENSSPUG00000002416) #17 LMNA (ENSSPUG00000002510) #18 MEX3A (ENSSPUG00000002522) #19 ENSSPUG00000002526 RAB25 (ENSSPUG00000002555) #20 LAMTOR2 (ENSSPUG00000002639) #21 UBQLN4 (ENSSPUG00000002649) #22 GPATCH4 (ENSSPUG00000002674) NAXE (ENSSPUG00000002689) IQGAP3 (ENSSPUG00000002736) MEF2D (ENSSPUG00000003141) #7 RHBG (ENSSPUG00000003411) #8 ENSSPUG00000004095 ENSSPUG00000004101 Archelosauria ANCESTRAL SPECIES 27 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Archosauria ANCESTRAL SPECIES 28 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Aves ANCESTRAL SPECIES 31 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Neognathae ANCESTRAL SPECIES 28 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Neognathae_b ANCESTRAL SPECIES 33 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00960000189601 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 Passeriformes ANCESTRAL SPECIES 37 ENSGT00390000003453.b.b ENSGT00510000047366 ENSGT01030000234542.b.a.a.b.a.b ENSGT01030000234542.b.a.a.a.b ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00960000189601 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 Great tit MODERN SPECIES 17 HAX1 (ENSPMJG00000000564) UBAP2L (ENSPMJG00000000484) C1orf43 (ENSPMJG00000000460) ENSPMJG00000000449 TPM3 (ENSPMJG00000000373) TMEM79 (ENSPMJG00000000349) #11 SMG5 (ENSPMJG00000000283) #12 ENSPMJG00000000280 #14 PMF1 (ENSPMJG00000000278) #15 SLC25A44 (ENSPMJG00000000271) #16 SEMA4A (ENSPMJG00000000261) #17 LMNA (ENSPMJG00000000245) #18 MEX3A (ENSPMJG00000000236) #19 ENSPMJG00000000220 RAB25 (ENSPMJG00000000212) #20 UBQLN4 (ENSPMJG00000000181) #22 GPATCH4 (ENSPMJG00000000160) ENSPMJG00000000065 IQGAP3 (ENSPMJG00000009919) MEF2D (ENSPMJG00000009914) #7 RHBG (ENSPMJG00000009901) #8 HAPLN2 (ENSPMJG00000009900) BCAN (ENSPMJG00000009899) ENSPMJG00000009896 ENSPMJG00000009894 ENSPMJG00000009890 CRABP2 (ENSPMJG00000009888) ISG20L2 (ENSPMJG00000009887) METTL25B (ENSPMJG00000009886) MRPL24 (ENSPMJG00000009885) HDGF (ENSPMJG00000009884) Passeriformes_d ANCESTRAL SPECIES 26 ENSGT00510000047366 ENSGT01030000234542.b.a.a.b.a.b ENSGT01090000262236 ENSGT01030000234542.b.a.a.a.b ENSGT00390000002390.b #11 ENSGT00940000154566.i #12 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00960000189601 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 Flycatcher MODERN SPECIES 17 ENSFALG00000024050 ENSFALG00000024658 ENSFALG00000024237 ENSFALG00000002550 #9 ENSFALG00000002555 #23 ENSFALG00000002560 #12 ENSFALG00000024781 #14 PMF1 (ENSFALG00000028987) #15 SLC25A44 (ENSFALG00000002568) #16 SEMA4A (ENSFALG00000002573) #17 LMNA (ENSFALG00000002586) #18 MEX3A (ENSFALG00000014982) #19 ENSFALG00000002594 RAB25 (ENSFALG00000002597) #20 LAMTOR2 (ENSFALG00000002604) #21 UBQLN4 (ENSFALG00000002609) #22 NAXE (ENSFALG00000002625) ENSFALG00000002636 IQGAP3 (ENSFALG00000002642) MEF2D (ENSFALG00000013606) #7 RHBG (ENSFALG00000003358) #8 ENSFALG00000028856 ENSFALG00000003292 ENSFALG00000025964 ENSFALG00000028936 ENSFALG00000003229 CRABP2 (ENSFALG00000003205) ENSFALG00000023585 ENSFALG00000028907 MRPL24 (ENSFALG00000003167) HDGF (ENSFALG00000024224) Passeriformes_g ANCESTRAL SPECIES 27 ENSGT00510000047366 ENSGT01030000234542.b.a.a.b.a.b ENSGT01090000262236 ENSGT01030000234542.b.a.a.a.b ENSGT00390000002390.b #11 ENSGT00940000154566.i #12 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00960000189601 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 Medium ground finch MODERN SPECIES 247 ATP8B2 (ENSGFOG00000010292) AQP10 (ENSGFOG00000010284) ENSGFOG00000010280 UBAP2L (ENSGFOG00000010247) C1orf43 (ENSGFOG00000010231) TPM3 (ENSGFOG00000010212) TMEM79 (ENSGFOG00000010207) #11 SMG5 (ENSGFOG00000010189) #12 SLC25A44 (ENSGFOG00000010182) #16 SEMA4A (ENSGFOG00000010172) #17 LMNA (ENSGFOG00000010161) #18 MEX3A (ENSGFOG00000010158) #19 ENSGFOG00000010153 RAB25 (ENSGFOG00000010146) #20 LAMTOR2 (ENSGFOG00000010143) #21 UBQLN4 (ENSGFOG00000010134) #22 NAXE (ENSGFOG00000010126) ENSGFOG00000010121 IQGAP3 (ENSGFOG00000010097) MEF2D (ENSGFOG00000010083) #7 RHBG (ENSGFOG00000010070) #8 HAPLN2 (ENSGFOG00000010066) BCAN (ENSGFOG00000010058) ENSGFOG00000010037 ENSGFOG00000010028 ENSGFOG00000010024 ENSGFOG00000010020 Passeroidea ANCESTRAL SPECIES 28 ENSGT00510000047366 ENSGT01030000234542.b.a.a.b.a.b ENSGT01090000262236 ENSGT01030000234542.b.a.a.a.b ENSGT00390000002390.b #11 ENSGT00940000154566.i #12 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 Common canary MODERN SPECIES 81 HAX1 (ENSSCAG00000012964) UBAP2L (ENSSCAG00000012983) C1orf43 (ENSSCAG00000013023) ENSSCAG00000013039 TMEM79 (ENSSCAG00000013060) #11 SMG5 (ENSSCAG00000013067) #12 BGLAP (ENSSCAG00000013078) #14 PMF1 (ENSSCAG00000013084) #15 SLC25A44 (ENSSCAG00000013089) #16 SEMA4A (ENSSCAG00000013096) #17 LMNA (ENSSCAG00000013107) #18 MEX3A (ENSSCAG00000013118) #19 ENSSCAG00000013124 RAB25 (ENSSCAG00000013131) #20 LAMTOR2 (ENSSCAG00000013138) #21 UBQLN4 (ENSSCAG00000013141) #22 ENSSCAG00000013149 NAXE (ENSSCAG00000013155) IQGAP3 (ENSSCAG00000013560) MEF2D (ENSSCAG00000014461) #7 RHBG (ENSSCAG00000014483) #8 HAPLN2 (ENSSCAG00000014493) ENSSCAG00000014502 ENSSCAG00000014506 ENSSCAG00000014510 Zebra finch MODERN SPECIES 18 UBAP2L (ENSTGUG00000003834) ENSTGUG00000029068 TPM3 (ENSTGUG00000003785) TMEM79 (ENSTGUG00000022613) #11 SMG5 (ENSTGUG00000003748) #12 BGLAP (ENSTGUG00000003747) #14 ENSTGUG00000024980 #15 SLC25A44 (ENSTGUG00000015885) #16 ENSTGUG00000018930 SEMA4A (ENSTGUG00000003695) #17 LMNA (ENSTGUG00000015888) #18 MEX3A (ENSTGUG00000003692) #19 ENSTGUG00000003680 RAB25 (ENSTGUG00000003675) #20 LAMTOR2 (ENSTGUG00000003670) #21 UBQLN4 (ENSTGUG00000003644) #22 ENSTGUG00000003636 NAXE (ENSTGUG00000003621) ENSTGUG00000003613 IQGAP3 (ENSTGUG00000003501) MEF2D (ENSTGUG00000003481) #7 RHBG (ENSTGUG00000003473) #8 HAPLN2 (ENSTGUG00000025869) BCAN (ENSTGUG00000023506) ENSTGUG00000026517 ENSTGUG00000022793 ENSTGUG00000024389 CRABP2 (ENSTGUG00000025174) ISG20L2 (ENSTGUG00000028521) METTL25B (ENSTGUG00000024904) MRPL24 (ENSTGUG00000017375) Neognathae_c ANCESTRAL SPECIES 33 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509.c #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b.z ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00960000189601 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Kakapo MODERN SPECIES 60 APH1A (ENSSHBG00005015233) SSR2 (ENSSHBG00005015244) #23 CCT3 (ENSSHBG00005015253) #9 TMEM79 (ENSSHBG00005015292) #11 SMG5 (ENSSHBG00005015374) #12 BGLAP (ENSSHBG00005016730) #14 PMF1 (ENSSHBG00005016733) #15 SLC25A44 (ENSSHBG00005016737) #16 ENSSHBG00005016749 #17 ENSSHBG00005016763 #17 LMNA (ENSSHBG00005016768) #18 MEX3A (ENSSHBG00005016781) #19 ENSSHBG00005016791 RAB25 (ENSSHBG00005016798) #20 LAMTOR2 (ENSSHBG00005016803) #21 UBQLN4 (ENSSHBG00005016810) #22 GPATCH4 (ENSSHBG00005016818) NAXE (ENSSHBG00005016822) ENSSHBG00005016829 ENSSHBG00005016834 ENSSHBG00005016844 ENSSHBG00005016853 MEF2D (ENSSHBG00005016873) #7 RHBG (ENSSHBG00005016897) #8 HAPLN2 (ENSSHBG00005016914) BCAN (ENSSHBG00005016921) ENSSHBG00005016928 ENSSHBG00005016935 ENSSHBG00005016942 CRABP2 (ENSSHBG00005016949) ISG20L2 (ENSSHBG00005016955) Golden eagle MODERN SPECIES 25 SSR2 (ENSACCG00020002642) #23 CCT3 (ENSACCG00020002624) #9 GLMP (ENSACCG00020002603) #10 TMEM79 (ENSACCG00020002589) #11 SMG5 (ENSACCG00020002562) #12 PAQR6 (ENSACCG00020002533) #13 ENSACCG00020002491 #14 ENSACCG00020002471 SLC25A44 (ENSACCG00020002449) #16 SEMA4A (ENSACCG00020002423) #17 LMNA (ENSACCG00020002398) #18 MEX3A (ENSACCG00020002384) #19 ENSACCG00020002373 RAB25 (ENSACCG00020002353) #20 LAMTOR2 (ENSACCG00020002334) #21 UBQLN4 (ENSACCG00020002302) #22 GPATCH4 (ENSACCG00020002248) NAXE (ENSACCG00020002232) IQGAP3 (ENSACCG00020002188) MEF2D (ENSACCG00020002103) #7 RHBG (ENSACCG00020002042) #8 HAPLN2 (ENSACCG00020002002) BCAN (ENSACCG00020001979) ENSACCG00020001960 ENSACCG00020001947 ENSACCG00020001921 CRABP2 (ENSACCG00020001890) ISG20L2 (ENSACCG00020001876) METTL25B (ENSACCG00020001855) MRPL24 (ENSACCG00020001839) HDGF (ENSACCG00020001815) Galloanserae ANCESTRAL SPECIES 36 ENSGT00940000155176 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Phasianidae ANCESTRAL SPECIES 30 ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00960000189418 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000264033 ENSGT00390000012355.B.b ENSGT00730000111185 Japanese quail MODERN SPECIES 17 PEA15 (ENSCJPG00005013933) ENSCJPG00005013932 PEX19 (ENSCJPG00005013931) CCT3 (ENSCJPG00005013930) #9 GLMP (ENSCJPG00005013929) #10 TMEM79 (ENSCJPG00005013928) #11 SMG5 (ENSCJPG00005013927) #12 ENSCJPG00005013926 SLC25A44 (ENSCJPG00005013925) #16 SEMA4A (ENSCJPG00005013924) #17 LMNA (ENSCJPG00005013923) #18 MEX3A (ENSCJPG00005013921) #19 ENSCJPG00005013920 RAB25 (ENSCJPG00005013919) #20 LAMTOR2 (ENSCJPG00005013918) #21 UBQLN4 (ENSCJPG00005013917) #22 ENSCJPG00005013916 VPS45 (ENSCJPG00005013915) PLEKHO1 (ENSCJPG00005013914) ANP32E (ENSCJPG00005013913) Phasianidae_b ANCESTRAL SPECIES 38 ENSGT00440000037582 ENSGT00550000075028 ENSGT00530000063760.b ENSGT00950000182907.a.a ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT01100000264033 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT00390000005869.a Chicken MODERN SPECIES 17 ARHGAP30 (ENSGALG00010028486) NECTIN4 (ENSGALG00010028490) ENSGALG00010028492 ENSGALG00010028494 VPS45 (ENSGALG00010028500) PLEKHO1 (ENSGALG00010028502) ANP32E (ENSGALG00010028507) ENSGALG00010027300 ENSGALG00010027978 ENSGALG00010027294 ENSGALG00010028066 #18 MEX3A (ENSGALG00010028070) #19 ENSGALG00010028072 RAB25 (ENSGALG00010028075) #20 LAMTOR2 (ENSGALG00010028078) #21 UBQLN4 (ENSGALG00010028081) #22 ENSGALG00010028085 NAXE (ENSGALG00010028088) ENSGALG00010028094 TTC24 (ENSGALG00010028097) IQGAP3 (ENSGALG00010028108) ARHGEF2 (ENSGALG00010027310) #25 ENSGALG00010027354 ENSGALG00010027297 OTUD7B (ENSGALG00010028750) MTMR11 (ENSGALG00010028752) SF3B4 (ENSGALG00010028887) SV2A (ENSGALG00010028753) BOLA1 (ENSGALG00010027977) ENSGALG00010028698 HJV (ENSGALG00010027586) Turkey MODERN SPECIES 1201 ENSMGAG00000020816 ENSMGAG00000015563 #19 ENSMGAG00000018320 UBQLN4 (ENSMGAG00000000655) #22 LAMTOR2 (ENSMGAG00000022966) #21 ENSMGAG00000001186 Anatidae ANCESTRAL SPECIES 81 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000155413 ENSGT00390000007153.a.b ENSGT00390000018130.a.a.a ENSGT00940000154566 #12 ENSGT00960000189418 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463.b #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.g ENSGT00940000167106 Duck MODERN SPECIES 17 PLEKHO1 (ENSAPLG00000002526) VPS45 (ENSAPLG00000002351) OTUD7B (ENSAPLG00000004627) ENSAPLG00000019128 ETV3 (ENSAPLG00000023696) PRPF3 (ENSAPLG00000002440) ENSAPLG00000002706 ENSAPLG00000021823 ENSA (ENSAPLG00000010036) GOLPH3L (ENSAPLG00000009987) HORMAD1 (ENSAPLG00000009738) SMG5 (ENSAPLG00000010263) #12 ENSAPLG00000022171 LMNA (ENSAPLG00000009487) #18 MEX3A (ENSAPLG00000009476) #19 UBQLN4 (ENSAPLG00000009055) #22 IQGAP3 (ENSAPLG00000007690) MEF2D (ENSAPLG00000007271) #7 HAPLN2 (ENSAPLG00000016119) ENSAPLG00000030819 Pink-footed goose MODERN SPECIES 362 MCL1 (ENSABRG00000006246) ENSA (ENSABRG00000006255) GOLPH3L (ENSABRG00000006261) HORMAD1 (ENSABRG00000006294) SMG5 (ENSABRG00000006336) #12 ENSABRG00000006348 #14 PMF1 (ENSABRG00000006352) #15 SLC25A44 (ENSABRG00000006360) #16 SEMA4A (ENSABRG00000006369) #17 LMNA (ENSABRG00000006382) #18 MEX3A (ENSABRG00000006394) #19 ENSABRG00000006400 RAB25 (ENSABRG00000006405) #20 UBQLN4 (ENSABRG00000006418) #22 LAMTOR2 (ENSABRG00000006434) #21 ENSABRG00000006441 ENSABRG00000006447 IQGAP3 (ENSABRG00000006462) ENSABRG00000006474 MEF2D (ENSABRG00000006481) #7 RHBG (ENSABRG00000006501) #8 HAPLN2 (ENSABRG00000006504) ENSABRG00000006508 ENSABRG00000006516 ENSABRG00000006524 African ostrich MODERN SPECIES 356 UBQLN4 (ENSSCUG00000004399) #22 NAXE (ENSSCUG00000004396) IQGAP3 (ENSSCUG00000004366) Australian saltwater crocodile MODERN SPECIES 15 GLMP (ENSCPRG00005007771) #10 TMEM79 (ENSCPRG00005007775) #11 SMG5 (ENSCPRG00005007786) #12 ENSCPRG00005007795 #13 ENSCPRG00005007796 #13 ENSCPRG00005007797 BGLAP (ENSCPRG00005007799) #14 LMNA (ENSCPRG00005007803) #18 MEX3A (ENSCPRG00005007807) #19 ENSCPRG00005007809 RAB25 (ENSCPRG00005007819) #20 LAMTOR2 (ENSCPRG00005007823) #21 UBQLN4 (ENSCPRG00005007826) #22 GPATCH4 (ENSCPRG00005007835) NAXE (ENSCPRG00005007843) TTC24 (ENSCPRG00005007848) IQGAP3 (ENSCPRG00005007853) MEF2D (ENSCPRG00005007870) #7 RHBG (ENSCPRG00005007888) #8 HAPLN2 (ENSCPRG00005007895) BCAN (ENSCPRG00005007910) ENSCPRG00005007929 ENSCPRG00005007931 CRABP2 (ENSCPRG00005007933) ISG20L2 (ENSCPRG00005007934) METTL25B (ENSCPRG00005007936) MRPL24 (ENSCPRG00005007941) HDGF (ENSCPRG00005007943) Cryptodira ANCESTRAL SPECIES 20 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131 #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131.a #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765.n ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 Emydidae ANCESTRAL SPECIES 18 ENSGT00390000005125 #23 ENSGT00570000079224 #9 ENSGT00390000005131.a #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00410000026290.i #14 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244.h.b #18 ENSGT00940000161732 #19 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765.n ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 painted turtle MODERN SPECIES 785 SSR2 (ENSCPBG00000025864) #23 CCT3 (ENSCPBG00000025861) #9 GLMP (ENSCPBG00000025860) #10 TMEM79 (ENSCPBG00000025854) #11 SMG5 (ENSCPBG00000025848) #12 PAQR6 (ENSCPBG00000025845) #13 BGLAP (ENSCPBG00000025842) #14 PMF1 (ENSCPBG00000025840) #15 SLC25A44 (ENSCPBG00000025837) #16 SEMA4A (ENSCPBG00000025830) #17 ENSCPBG00000025823 #18 MEX3A (ENSCPBG00000025821) #19 ENSCPBG00000025819 RAB25 (ENSCPBG00000025817) #20 LAMTOR2 (ENSCPBG00000025814) #21 UBQLN4 (ENSCPBG00000025810) #22 GPATCH4 (ENSCPBG00000025803) NAXE (ENSCPBG00000025800) IQGAP3 (ENSCPBG00000025794) ENSCPBG00000025790 #32 DAP3 (ENSCPBG00000025787) #31 MSTO1 (ENSCPBG00000025784) #30 ENSCPBG00000025730 #29 SYT11 (ENSCPBG00000025720) #28 RIT1 (ENSCPBG00000025719) #27 KHDC4 (ENSCPBG00000025715) #26 THBS3 (ENSCPBG00000025710) MTX1 (ENSCPBG00000025708) GBA1 (ENSCPBG00000025703) ENSCPBG00000025702 ENSCPBG00000025700 Three-toed box turtle MODERN SPECIES 102 GLMP (ENSTMTG00000021048) #10 TMEM79 (ENSTMTG00000021042) #11 SMG5 (ENSTMTG00000021032) #12 PAQR6 (ENSTMTG00000021023) #13 ENSTMTG00000021022 PMF1 (ENSTMTG00000021018) #15 SLC25A44 (ENSTMTG00000021015) #16 ENSTMTG00000021008 #17 ENSTMTG00000021004 #17 ENSTMTG00000021000 MEX3A (ENSTMTG00000020991) #19 ENSTMTG00000020985 ENSTMTG00000020981 RAB25 (ENSTMTG00000020976) #20 LAMTOR2 (ENSTMTG00000020971) #21 UBQLN4 (ENSTMTG00000020912) #22 IQGAP3 (ENSTMTG00000020666) MEF2D (ENSTMTG00000020638) #7 RHBG (ENSTMTG00000020629) #8 HAPLN2 (ENSTMTG00000020622) BCAN (ENSTMTG00000020597) ENSTMTG00000020582 ENSTMTG00000020577 CRABP2 (ENSTMTG00000020566) ISG20L2 (ENSTMTG00000020564) METTL25B (ENSTMTG00000020559) MRPL24 (ENSTMTG00000020554) HDGF (ENSTMTG00000020549) PRCC (ENSTMTG00000020541) SH2D2A (ENSTMTG00000020518) ENSTMTG00000020507 Testudinidae ANCESTRAL SPECIES 3 ENSGT00570000079224 #9 ENSGT00390000005131.a #10 ENSGT00390000002390.b #11 ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00960000189418 ENSGT00940000162656 #15 ENSGT00940000155399 #16 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000163126 ENSGT00940000165149 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765.n ENSGT00390000007227.a ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 Goode s thornscrub tortoise MODERN SPECIES 16 SSR2 (ENSGEVG00005017086) #23 CCT3 (ENSGEVG00005017052) #9 GLMP (ENSGEVG00005017028) #10 TMEM79 (ENSGEVG00005016914) #11 SMG5 (ENSGEVG00005016873) #12 PAQR6 (ENSGEVG00005016803) #13 ENSGEVG00005016778 PMF1 (ENSGEVG00005016760) #15 SLC25A44 (ENSGEVG00005016726) #16 SEMA4A (ENSGEVG00005016697) #17 LMNA (ENSGEVG00005016668) #18 MEX3A (ENSGEVG00005016649) #19 ENSGEVG00005016590 RAB25 (ENSGEVG00005016498) #20 LAMTOR2 (ENSGEVG00005016481) #21 UBQLN4 (ENSGEVG00005016451) #22 GPATCH4 (ENSGEVG00005016428) NAXE (ENSGEVG00005016400) IQGAP3 (ENSGEVG00005015449) MEF2D (ENSGEVG00005015371) #7 RHBG (ENSGEVG00005015040) #8 HAPLN2 (ENSGEVG00005014721) BCAN (ENSGEVG00005014368) ENSGEVG00005014294 ENSGEVG00005014272 ENSGEVG00005014250 CRABP2 (ENSGEVG00005014210) ISG20L2 (ENSGEVG00005014190) METTL25B (ENSGEVG00005014161) MRPL24 (ENSGEVG00005014131) HDGF (ENSGEVG00005014106) Abingdon island giant tortoise MODERN SPECIES 1671 ENSCABG00000018158 #10 ENSCABG00000018157 #10 TMEM79 (ENSCABG00000018156) #11 SMG5 (ENSCABG00000018154) #12 ENSCABG00000018152 #13 ENSCABG00000018151 #13 PMF1 (ENSCABG00000018150) #15 SLC25A44 (ENSCABG00000018148) #16 SEMA4A (ENSCABG00000018143) #17 LMNA (ENSCABG00000018140) #18 MEX3A (ENSCABG00000018137) #19 ENSCABG00000018135 ENSCABG00000018133 RAB25 (ENSCABG00000018130) #20 LAMTOR2 (ENSCABG00000018126) #21 UBQLN4 (ENSCABG00000018121) #22 ENSCABG00000018117 ENSCABG00000018102 NAXE (ENSCABG00000018099) IQGAP3 (ENSCABG00000018011) MEF2D (ENSCABG00000017991) #7 RHBG (ENSCABG00000017984) #8 HAPLN2 (ENSCABG00000017810) ENSCABG00000017765 ENSCABG00000017759 ENSCABG00000017754 ENSCABG00000017751 ISG20L2 (ENSCABG00000017748) METTL25B (ENSCABG00000017746) MRPL24 (ENSCABG00000017743) HDGF (ENSCABG00000017740) Chinese turtle MODERN SPECIES 370 ENSPSIG00000001047 ENSPSIG00000016401 CCT3 (ENSPSIG00000015722) #9 GLMP (ENSPSIG00000015712) #10 TMEM79 (ENSPSIG00000015365) #11 SMG5 (ENSPSIG00000015198) #12 PAQR6 (ENSPSIG00000015029) #13 BGLAP (ENSPSIG00000015018) #14 PMF1 (ENSPSIG00000014836) #15 SLC25A44 (ENSPSIG00000014778) #16 SEMA4A (ENSPSIG00000014103) #17 ENSPSIG00000014092 LMNA (ENSPSIG00000013224) #18 ENSPSIG00000013143 RAB25 (ENSPSIG00000013051) #20 UBQLN4 (ENSPSIG00000012561) #22 GPATCH4 (ENSPSIG00000011317) TTC24 (ENSPSIG00000010973) IQGAP3 (ENSPSIG00000010888) NAXE (ENSPSIG00000010506) MEF2D (ENSPSIG00000010381) #7 RHBG (ENSPSIG00000009777) #8 ENSPSIG00000009383 ENSPSIG00000009263 BCAN (ENSPSIG00000008257) ENSPSIG00000001994 ENSPSIG00000007701 CRABP2 (ENSPSIG00000007402) ISG20L2 (ENSPSIG00000007349) METTL25B (ENSPSIG00000007334) MRPL24 (ENSPSIG00000007061) Anura ANCESTRAL SPECIES 155 ENSGT00940000155451 ENSGT00390000014633 ENSGT00940000164480 ENSGT00390000012496.b ENSGT00940000155795 ENSGT00390000002049.c.a ENSGT00940000156893 ENSGT00390000018360 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343 ENSGT00940000167106 ENSGT00940000153558.a ENSGT00940000157619 ENSGT00940000159724 ENSGT00530000063745.a Frog MODERN SPECIES 8 ENSXETG00000009076 ENSXETG00000012424 ENSXETG00000046600 ENSXETG00000046397 ENSXETG00000035173 ENSXETG00000009073 ENSXETG00000030689 ENSXETG00000045902 kirrel1 (ENSXETG00000030921) aph1a (ENSXETG00000016439) ca14 (ENSXETG00000016426) ENSXETG00000034793 ciart (ENSXETG00000039938) fkbp9 (ENSXETG00000020413) rab25 (ENSXETG00000020404) #20 ubqln4 (ENSXETG00000020399) #22 naxe (ENSXETG00000020391) gpatch4 (ENSXETG00000020397) ttc24 (ENSXETG00000041362) iqgap3 (ENSXETG00000020384) mef2d (ENSXETG00000020378) #7 ENSXETG00000048801 ENSXETG00000043025 ENSXETG00000048921 rhbg (ENSXETG00000019898) #8 hapln2 (ENSXETG00000019910) bcan (ENSXETG00000019908) nes (ENSXETG00000044219) dnaja4.2 (ENSXETG00000019917) crabp2 (ENSXETG00000019927) isg20l2 (ENSXETG00000035319) Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000024205 ENSLLEG00000024161 ENSLLEG00000024071 CERS2 (ENSLLEG00000023791) ENSLLEG00000023770 ENSLLEG00000023756 KIRREL1 (ENSLLEG00000023640) ENSLLEG00000023606 APH1A (ENSLLEG00000023550) ENSLLEG00000023463 ENSLLEG00000023443 ENSLLEG00000023375 ENSLLEG00000023357 RAB25 (ENSLLEG00000023071) #20 LAMTOR2 (ENSLLEG00000022949) #21 UBQLN4 (ENSLLEG00000022159) #22 ENSLLEG00000022057 NAXE (ENSLLEG00000021902) TTC24 (ENSLLEG00000021781) IQGAP3 (ENSLLEG00000029544) MEF2D (ENSLLEG00000029517) #7 ENSLLEG00000029507 RHBG (ENSLLEG00000029486) #8 HAPLN2 (ENSLLEG00000029472) ENSLLEG00000029460 ENSLLEG00000029407 ENSLLEG00000029391 ENSLLEG00000029355 ENSLLEG00000029323 CRABP2 (ENSLLEG00000029301) ENSLLEG00000029289 Coelacanth MODERN SPECIES 815 rhbg (ENSLACG00000001771) #8 hapln2 (ENSLACG00000004507) bcan (ENSLACG00000005636) IQGAP3 (ENSLACG00000007771) TTC24 (ENSLACG00000009122) NAXE (ENSLACG00000009488) GPATCH4 (ENSLACG00000009700) UBQLN4 (ENSLACG00000010468) #22 LAMTOR2 (ENSLACG00000010926) #21 RAB25 (ENSLACG00000011157) #20 rab11al (ENSLACG00000011380) MEX3A (ENSLACG00000011943) #19 LMNA (ENSLACG00000012778) #18 ENSLACG00000013812 SLC25A44 (ENSLACG00000014139) #16 PMF1 (ENSLACG00000014303) #15 ENSLACG00000014491 Actinopterygii DUPLICATION Actinopterygii ANCESTRAL SPECIES ENSGT00940000155620.q #22 Neopterygii ANCESTRAL SPECIES ENSGT00940000155620.q #22 Spotted gar MODERN SPECIES 663 ENSLOCG00000008991 ENSLOCG00000008968 ENSLOCG00000008950 ENSLOCG00000008940 ENSLOCG00000017691 rpz2 (ENSLOCG00000017690) ENSLOCG00000017689 ENSLOCG00000017688 ENSLOCG00000017687 rpz6 (ENSLOCG00000017686) rpz5 (ENSLOCG00000017685) rpz4 (ENSLOCG00000017684) tmem176l.4 (ENSLOCG00000008935) ENSLOCG00000008923 zgc:174938 (ENSLOCG00000008906) UBQLN4 (ENSLOCG00000008897) #22 lamtor2 (ENSLOCG00000008891) #21 rab25a (ENSLOCG00000008881) #20 rab11al (ENSLOCG00000008865) ENSLOCG00000008857 lmna (ENSLOCG00000008848) #18 ENSLOCG00000008831 gpatch4 (ENSLOCG00000008820) naxe (ENSLOCG00000008812) DENND4B (ENSLOCG00000008793) si:dkey-6i22.5 (ENSLOCG00000008782) #15 ENSLOCG00000008768 gnrhr1 (ENSLOCG00000008760) ENSLOCG00000008748 iqgap3 (ENSLOCG00000008716) gatad2b (ENSLOCG00000008705) Osteoglossocephalai ANCESTRAL SPECIES 849 ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 Clupeocephala ANCESTRAL SPECIES 767 ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00940000153253.a ENSGT00940000156245.a.b ENSGT01030000236049 ENSGT00390000017955.d ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00980000200411 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00940000160023 ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00940000156869 ENSGT00390000008096.C.b ENSGT00940000157121 ENSGT00940000155660.a ENSGT00530000063480.b ENSGT00530000063609.b.x ENSGT00390000004280 ENSGT00940000160808 ENSGT00950000183188.B ENSGT00940000154957.B Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000153253.a ENSGT00940000156245.a.b ENSGT00390000017955.d ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00980000200411 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00940000154337.b ENSGT00940000156869 ENSGT00390000008096.C.b ENSGT00940000157121 ENSGT00940000155660.a ENSGT00530000063480.b ENSGT00530000063609.b.x ENSGT00390000004280 ENSGT01100000263491.a.b.a.a.a.a.b.u.b ENSGT00940000160808 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 48 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c ENSGT00390000017955.d.h ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a #22 ENSGT00940000158230.b.b.c #20 ENSGT00940000160242.b.b ENSGT00940000154107.b ENSGT00940000154995.eb ENSGT00940000154337.a.b.a ENSGT00940000156869.e.a ENSGT00390000008096.C.b.d.b ENSGT00940000157121.k ENSGT00940000155660.a.a.b ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q ENSGT00530000063609.b.x.c.a ENSGT00390000004280.h.b ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c ENSGT00390000017955.d.h ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a #22 ENSGT00940000158230.b.b.c #20 ENSGT00940000160242.b.b ENSGT00940000154107.b ENSGT00940000154995.eb ENSGT00940000154337.a.b.a ENSGT00940000156869.e.a ENSGT00390000008096.C.b.d.b ENSGT00940000157121.k ENSGT00940000155660.a.b ENSGT01070000254813 ENSGT00940000155660.a.a.b ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q ENSGT00530000063609.b.x.c.a Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c ENSGT00390000017955.d.h ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a #22 ENSGT00940000158230.b.b.c #20 ENSGT00940000160242.b.b ENSGT00940000154107.b ENSGT00940000154995.eb ENSGT00940000154337.a.b.a ENSGT00940000156869.f ENSGT00390000008096.C.b.d.b ENSGT00940000157121.k ENSGT00940000155660.a.b ENSGT01070000254813 ENSGT00940000155660.a.a.b ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q ENSGT00530000063609.b.x.c.a Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c ENSGT00390000017955.d.h ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a #22 ENSGT00940000158230.b.b.c #20 ENSGT00940000160242.b.b.a ENSGT00940000154107.b ENSGT00940000154995.eb ENSGT00940000154337.a.b.a ENSGT00940000156869.f ENSGT00390000008096.C.b.d.b ENSGT00940000157121.k ENSGT00940000155660.a.a.b ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q ENSGT00530000063609.b.x.c.a ENSGT00390000004280.h.b ENSGT00940000160808 Coho salmon MODERN SPECIES 8 PTDSS1 (ENSOKIG00005037131) ENSOKIG00005037903 ENSOKIG00005037959 rbm24a (ENSOKIG00005037976) cap2 (ENSOKIG00005038014) ENSOKIG00005038475 vps28 (ENSOKIG00005038484) mapk15 (ENSOKIG00005038500) grinaa (ENSOKIG00005038594) ENSOKIG00005038622 ENSOKIG00005038633 ENSOKIG00005038650 KCNQ4 (ENSOKIG00005038726) TINAGL1 (ENSOKIG00005039028) LIM2 (ENSOKIG00005039195) ENSOKIG00005039251 #22 rab25a (ENSOKIG00005039359) #20 ENSOKIG00005039394 ENSOKIG00005039403 kat2b (ENSOKIG00005039493) RAB5A (ENSOKIG00005040055) ENSOKIG00005040112 satb1a (ENSOKIG00005040510) tbc1d5 (ENSOKIG00005040670) ENSOKIG00005043665 ENSOKIG00005043740 ENSOKIG00005043747 dazl (ENSOKIG00005043763) ENSOKIG00005043784 ENSOKIG00005043793 ENSOKIG00005043803 Chinook salmon MODERN SPECIES 4 ENSOTSG00005006033 PTDSS1 (ENSOTSG00005006039) nup153 (ENSOTSG00005006057) ENSOTSG00005006058 cap2 (ENSOTSG00005006060) ENSOTSG00005006061 vps28 (ENSOTSG00005006062) mapk15 (ENSOTSG00005006065) grinaa (ENSOTSG00005006069) ENSOTSG00005006070 ENSOTSG00005006071 nfyc (ENSOTSG00005006077) KCNQ4 (ENSOTSG00005006141) TINAGL1 (ENSOTSG00005006145) lim2.5 (ENSOTSG00005006155) ENSOTSG00005006156 #22 rab25a (ENSOTSG00005006201) #20 ENSOTSG00005006202 ENSOTSG00005006203 ENSOTSG00005006204 kat2b (ENSOTSG00005006214) RAB5A (ENSOTSG00005009191) ENSOTSG00005009192 ENSOTSG00005009193 tbc1d5 (ENSOTSG00005009194) ENSOTSG00005009926 ENSOTSG00005009927 ENSOTSG00005009929 dazl (ENSOTSG00005009930) ENSOTSG00005009932 oxnad1 (ENSOTSG00005009933) Rainbow trout MODERN SPECIES 9 ENSOMYG00000006993 ENSOMYG00000066338 rbm24a (ENSOMYG00000049823) cap2 (ENSOMYG00000006398) ENSOMYG00000005833 vps28 (ENSOMYG00000005826) mapk15 (ENSOMYG00000005633) grinaa (ENSOMYG00000015429) ENSOMYG00000015422 ENSOMYG00000015419 ENSOMYG00000015348 ENSOMYG00000026008 ENSOMYG00000015328 ENSOMYG00000015315 ENSOMYG00000015306 ENSOMYG00000015206 #22 ENSOMYG00000015161 #20 ENSOMYG00000075706 ENSOMYG00000077447 ENSOMYG00000015152 ENSOMYG00000015144 kat2b (ENSOMYG00000014314) RAB5A (ENSOMYG00000014195) KCNH8 (ENSOMYG00000014041) satb1a (ENSOMYG00000013702) tbc1d5 (ENSOMYG00000013579) ENSOMYG00000058228 ENSOMYG00000013394 ENSOMYG00000073485 ENSOMYG00000013302 ENSOMYG00000013288 Salmo ANCESTRAL SPECIES 2 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c ENSGT00390000017955.d.h ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a #22 ENSGT00940000158230.b.b.c #20 ENSGT00940000160242.b.b ENSGT00940000154107.b ENSGT00940000154995.eb ENSGT00940000154337.a.b.a ENSGT00940000156869.e.a ENSGT00390000008096.C.b.d.b ENSGT00940000157121.k ENSGT01070000254813 ENSGT00940000155660.a.a.b ENSGT01050000244843.d.e.b ENSGT00940000163711.b.c.b ENSGT00530000063480.b.q ENSGT00530000063609.b.x.c.a ENSGT00390000004280.h.b Atlantic salmon MODERN SPECIES 19 ENSSSAG00000094989 lrrc14b (ENSSSAG00000103287) uqcrb (ENSSSAG00000047957) mterf3 (ENSSSAG00000047981) PTDSS1 (ENSSSAG00000057950) ENSSSAG00000047460 ENSSSAG00000047472 cap2 (ENSSSAG00000047393) ENSSSAG00000095343 grinaa (ENSSSAG00000047153) ENSSSAG00000047124 ENSSSAG00000046875 ENSSSAG00000046856 ENSSSAG00000046830 ENSSSAG00000068152 ubql4 (ENSSSAG00000046723) #22 ENSSSAG00000046697 #20 ENSSSAG00000046690 ENSSSAG00000046678 kat2b (ENSSSAG00000046492) RAB5A (ENSSSAG00000110045) ENSSSAG00000045793 satb1a (ENSSSAG00000114957) ENSSSAG00000088469 tbc1d5 (ENSSSAG00000040193) ENSSSAG00000040073 ENSSSAG00000096809 ENSSSAG00000088140 dazl (ENSSSAG00000116219) ENSSSAG00000039761 ENSSSAG00000118045 River trout MODERN SPECIES 27 ENSSTUG00000022384 rbm24a (ENSSTUG00000022380) cap2 (ENSSTUG00000022036) ENSSTUG00000022014 vps28 (ENSSTUG00000022001) mapk15 (ENSSTUG00000021931) grinaa (ENSSTUG00000021857) RPRD1A (ENSSTUG00000021844) ENSSTUG00000021818 nfyc (ENSSTUG00000021729) ENSSTUG00000021719 KCNQ4 (ENSSTUG00000021587) ENSSTUG00000021571 TINAGL1 (ENSSTUG00000021559) lim2.5 (ENSSTUG00000021536) ENSSTUG00000021476 #22 rab25a (ENSSTUG00000021456) #20 ENSSTUG00000021448 ENSSTUG00000021441 kat2b (ENSSTUG00000021073) RAB5A (ENSSTUG00000021044) satb1a (ENSSTUG00000021041) tbc1d5 (ENSSTUG00000020110) ENSSTUG00000020040 ENSSTUG00000019945 ENSSTUG00000019930 ENSSTUG00000019925 dazl (ENSSTUG00000019898) ENSSTUG00000019879 oxnad1 (ENSSTUG00000019867) GALNT15 (ENSSTUG00000019842) Huchen MODERN SPECIES 1778 TINAGL1 (ENSHHUG00000002030) ENSHHUG00000002005 ENSHHUG00000001944 #22 rab25a (ENSHHUG00000001935) #20 ENSHHUG00000001924 ENSHHUG00000001916 kat2b (ENSHHUG00000001788) RAB5A (ENSHHUG00000001706) Salmoninae ANCESTRAL SPECIES 136 ENSGT00390000005801 ENSGT00530000063576.B.a.b.b ENSGT00940000153253.a.c ENSGT00940000156245.a.b.d ENSGT00390000017955.d.g ENSGT00390000007486.c ENSGT00940000159758.h.a ENSGT01050000244890.a.a.a.g.c ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000165648 ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b #22 ENSGT00940000158230.b.b.d #20 ENSGT00940000160242.b.a ENSGT00940000154995.db ENSGT00940000154337.a.b.b ENSGT00940000156869.e.b ENSGT00390000008096.C.b.d.a ENSGT00940000157121.l ENSGT00940000155660.a.a.a ENSGT00530000063480.b.r ENSGT00530000063609.b.x.c.b ENSGT00390000004280.h.a ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb ENSGT00940000153470.a.a.a.b.a Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00440000033589.d.b.c ENSGT00390000005801 ENSGT00530000063576.B.a.b.b ENSGT00940000153253.a.c ENSGT00940000156245.a.b.d ENSGT00390000017955.d.g ENSGT00390000007486.c ENSGT00940000159758.h.a ENSGT01050000244890.a.a.a.g.c ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b #22 ENSGT00940000158230.b.b.d #20 ENSGT00940000160242.b.a ENSGT00940000154995.db ENSGT00940000154337.a.b.b ENSGT00940000156869.e.b ENSGT00390000008096.C.b.d.a ENSGT00940000157121.l ENSGT00940000155660.a.a.a ENSGT00530000063480.b.r ENSGT00530000063609.b.x.c.b ENSGT00390000004280.h.a ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00440000033589.d.b.c ENSGT00390000005801 ENSGT00530000063576.B.a.b.b ENSGT00940000153253.a.c ENSGT00940000156245.a.b.d ENSGT00390000017955.d.g ENSGT00390000007486.c ENSGT00940000159758.h.a ENSGT01050000244890.a.a.a.g.c ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b #22 ENSGT00940000158230.b.b.d #20 ENSGT00940000160242.b.a ENSGT00940000154995.db ENSGT00940000154337.a.b.b ENSGT00940000156869.e.b ENSGT00390000008096.C.b.d.a ENSGT00940000157121.l ENSGT00940000155660.a.a.a ENSGT00530000063480.b.r ENSGT00530000063609.b.x.c.b ENSGT00390000004280.h.a ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00440000033589.d.b.c ENSGT00390000005801 ENSGT00530000063576.B.a.b.b ENSGT00940000153253.a.c ENSGT00940000156245.a.b.d ENSGT00390000017955.d.g ENSGT00390000007486.c ENSGT00940000159758.h.a ENSGT01050000244890.a.a.a.g.c ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b #22 ENSGT00940000158230.b.b.d #20 ENSGT00940000160242.b.a ENSGT00940000154995.db ENSGT00940000154337.a.b.b ENSGT00940000156869.e.b ENSGT00390000008096.C.b.d.a ENSGT00940000157121.l ENSGT00940000155660.a.a.a ENSGT00530000063480.b.r ENSGT00530000063609.b.x.c.b ENSGT00390000004280.h.a ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb Coho salmon MODERN SPECIES 5 lrrc14b (ENSOKIG00005021899) mterf3 (ENSOKIG00005021918) PTDSS1 (ENSOKIG00005021955) nup153 (ENSOKIG00005022003) rbm24a (ENSOKIG00005022034) cap2 (ENSOKIG00005022046) vps28 (ENSOKIG00005022228) mapk15 (ENSOKIG00005022236) grinaa (ENSOKIG00005022250) ENSOKIG00005022278 RPRD1A (ENSOKIG00005022285) nfyc (ENSOKIG00005022336) KCNQ4 (ENSOKIG00005004317) TINAGL1 (ENSOKIG00005004449) LIM2 (ENSOKIG00005004500) ENSOKIG00005004546 #22 RAB25 (ENSOKIG00005004604) #20 ZNF385D (ENSOKIG00005004621) kat2b (ENSOKIG00005004681) RAB5A (ENSOKIG00005004989) KCNH8 (ENSOKIG00005005011) satb1a (ENSOKIG00005005220) tbc1d5 (ENSOKIG00005005258) ENSOKIG00005005414 dazl (ENSOKIG00005005469) ENSOKIG00005005493 ENSOKIG00005005510 oxnad1 (ENSOKIG00005005528) ENSOKIG00005005602 ENSOKIG00005005608 GPNMB (ENSOKIG00005005613) Chinook salmon MODERN SPECIES 24 ENSOTSG00005008851 mterf3 (ENSOTSG00005008848) PTDSS1 (ENSOTSG00005008847) nup153 (ENSOTSG00005008842) rbm24a (ENSOTSG00005008841) cap2 (ENSOTSG00005008724) vps28 (ENSOTSG00005008719) mapk15 (ENSOTSG00005008717) grinaa (ENSOTSG00005008715) ENSOTSG00005008714 RPRD1A (ENSOTSG00005008710) nfyc (ENSOTSG00005008444) KCNQ4 (ENSOTSG00005008413) TINAGL1 (ENSOTSG00005008406) lim2.5 (ENSOTSG00005008403) ENSOTSG00005008388 #22 RAB25 (ENSOTSG00005008387) #20 ZNF385D (ENSOTSG00005008386) kat2b (ENSOTSG00005004495) RAB5A (ENSOTSG00005004471) ENSOTSG00005004470 ENSOTSG00005004469 ENSOTSG00005004468 GPNMB (ENSOTSG00005004466) igf2bp3 (ENSOTSG00005004042) tra2a (ENSOTSG00005004039) ccdc126 (ENSOTSG00005004038) ENSOTSG00005004037 npy (ENSOTSG00005004036) ENSOTSG00005003723 ENSOTSG00005003714 Rainbow trout MODERN SPECIES 24 ENSOMYG00000011545 ENSOMYG00000011527 ENSOMYG00000011509 rbm24a (ENSOMYG00000011499) cap2 (ENSOMYG00000011405) vps28 (ENSOMYG00000011390) mapk15 (ENSOMYG00000011369) grinaa (ENSOMYG00000011338) ENSOMYG00000011312 ENSOMYG00000060583 ENSOMYG00000064546 ENSOMYG00000048335 ENSOMYG00000010733 ENSOMYG00000075414 ENSOMYG00000010619 ENSOMYG00000010583 #22 ENSOMYG00000010556 #20 ZNF385D (ENSOMYG00000062776) kat2b (ENSOMYG00000008707) RAB5A (ENSOMYG00000007766) KCNH8 (ENSOMYG00000011479) satb1a (ENSOMYG00000011451) tbc1d5 (ENSOMYG00000009058) ENSOMYG00000073762 ENSOMYG00000050278 dazl (ENSOMYG00000007820) ENSOMYG00000069497 ENSOMYG00000051561 ENSOMYG00000007692 oxnad1 (ENSOMYG00000007661) ENSOMYG00000007638 Salmo ANCESTRAL SPECIES 2 ENSGT00390000005801.c ENSGT00530000063576.B.a.b.b ENSGT00940000153253.a.c ENSGT00990000210909 ENSGT00940000156245.a.b.d ENSGT00390000017955.d.g ENSGT00390000007486.c ENSGT00940000159758.h.a ENSGT01050000244890.a.a.a.g.c ENSGT00980000200411 ENSGT00950000183094.b.b.c ENSGT00940000155689.o ENSGT00940000159209.d ENSGT00940000160023.h ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.a ENSGT00940000155620.q.b #22 ENSGT00940000158230.b.b.d #20 ENSGT00940000160242.b.a ENSGT00940000154995.db ENSGT00940000154337.a.b.b ENSGT00940000156869.e.b ENSGT00390000008096.C.b.d.a ENSGT00940000157121.l ENSGT00940000155660.a.a.a ENSGT00530000063480.b.r ENSGT00530000063609.b.x.c.b ENSGT00390000004280.h.a ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.b ENSGT00950000183188.B.p ENSGT00940000154957.B.h ENSGT00940000157167.eb Atlantic salmon MODERN SPECIES 5 ENSSSAG00000093638 ENSSSAG00000057888 ENSSSAG00000047545 ENSSSAG00000058134 ENSSSAG00000058158 ENSSSAG00000102627 cap2 (ENSSSAG00000058188) mapk15 (ENSSSAG00000058382) grinaa (ENSSSAG00000058399) ENSSSAG00000058405 ENSSSAG00000058408 nfyc (ENSSSAG00000058435) ENSSSAG00000058562 ENSSSAG00000058648 ENSSSAG00000098149 UBQL4 (ENSSSAG00000058719) #22 ENSSSAG00000099987 #20 ENSSSAG00000058816 ENSSSAG00000103521 ENSSSAG00000058826 ENSSSAG00000058839 ENSSSAG00000113896 ENSSSAG00000087966 kat2b (ENSSSAG00000111735) ENSSSAG00000024200 ENSSSAG00000064758 satb1a (ENSSSAG00000046228) tbc1d5 (ENSSSAG00000042278) ENSSSAG00000041431 dazl (ENSSSAG00000091289) ENSSSAG00000041364 River trout MODERN SPECIES 29 mterf3 (ENSSTUG00000040496) PTDSS1 (ENSSTUG00000040457) nup153 (ENSSTUG00000040354) ENSSTUG00000040346 rbm24a (ENSSTUG00000040340) cap2 (ENSSTUG00000040142) vps28 (ENSSTUG00000040131) mapk15 (ENSSTUG00000040114) grinaa (ENSSTUG00000040092) ENSSTUG00000040085 RPRD1A (ENSSTUG00000040062) nfyc (ENSSTUG00000039513) KCNQ4 (ENSSTUG00000039438) TINAGL1 (ENSSTUG00000039412) lim2.5 (ENSSTUG00000039396) ENSSTUG00000039222 #22 ENSSTUG00000039177 #20 ZNF385D (ENSSTUG00000039168) kat2b (ENSSTUG00000037743) RAB5A (ENSSTUG00000037684) ENSSTUG00000037654 ENSSTUG00000037645 ENSSTUG00000046943 dazl (ENSSTUG00000046935) ENSSTUG00000046928 ENSSTUG00000046914 oxnad1 (ENSSTUG00000046911) ENSSTUG00000046901 ENSSTUG00000046899 GPNMB (ENSSTUG00000046895) igf2bp3 (ENSSTUG00000046853) Huchen MODERN SPECIES 722 ENSHHUG00000005648 KCNQ4 (ENSHHUG00000005672) ENSHHUG00000005691 TINAGL1 (ENSHHUG00000005693) lim2.5 (ENSHHUG00000005748) ENSHHUG00000005752 #22 ENSHHUG00000005831 rab25a (ENSHHUG00000005835) #20 ENSHHUG00000005846 ENSHHUG00000005857 kat2b (ENSHHUG00000005870) RAB5A (ENSHHUG00000005906) KCNH8 (ENSHHUG00000005969) satb1a (ENSHHUG00000005987) tbc1d5 (ENSHHUG00000006169) ENSHHUG00000006576 ENSHHUG00000006587 dazl (ENSHHUG00000006799) ENSHHUG00000006814 Northern pike MODERN SPECIES 9 HIVEP1 (ENSELUG00000007223) edn1 (ENSELUG00000007183) rbm24a (ENSELUG00000007163) cap2 (ENSELUG00000007130) ENSELUG00000027226 vps28 (ENSELUG00000006986) mapk15 (ENSELUG00000006937) grinaa (ENSELUG00000006921) ENSELUG00000001493 RPRD1A (ENSELUG00000006888) ENSELUG00000006829 nfyc (ENSELUG00000006791) KCNQ4 (ENSELUG00000006759) TINAGL1 (ENSELUG00000006679) lim2.5 (ENSELUG00000006656) UBQLN4 (ENSELUG00000006629) #22 rab25a (ENSELUG00000006604) #20 ZNF385D (ENSELUG00000006590) ENSELUG00000006565 kat2b (ENSELUG00000006508) RAB5A (ENSELUG00000006462) KCNH8 (ENSELUG00000006418) satb1a (ENSELUG00000006344) tbc1d5 (ENSELUG00000006305) ENSELUG00000006244 dazl (ENSELUG00000006175) ENSELUG00000006125 oxnad1 (ENSELUG00000029103) ENSELUG00000006058 GALNT15 (ENSELUG00000006025) GPNMB (ENSELUG00000005995) Acanthomorphata ANCESTRAL SPECIES 55 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Zig-zag eel MODERN SPECIES 2 cyhr1 (ENSMAMG00000011735) ENSMAMG00000011755 pdcd6ip (ENSMAMG00000011771) ubp1 (ENSMAMG00000011804) clasp2 (ENSMAMG00000011902) fbxl2 (ENSMAMG00000012170) ENSMAMG00000012197 crtap (ENSMAMG00000012213) fkbp9 (ENSMAMG00000012223) ENSMAMG00000012247 ENSMAMG00000012280 ENSMAMG00000012339 ENSMAMG00000012366 ENSMAMG00000012384 ENSMAMG00000012425 ENSMAMG00000012446 #22 ENSMAMG00000012471 #20 ZNF385D (ENSMAMG00000012483) ENSMAMG00000012524 KAT2B (ENSMAMG00000012530) RAB5A (ENSMAMG00000012573) otud6b (ENSMAMG00000012583) ENSMAMG00000012594 runx1t1 (ENSMAMG00000012649) triqk (ENSMAMG00000012671) cibar1 (ENSMAMG00000012674) ENSMAMG00000012697 lratd2a (ENSMAMG00000012706) fam91a1 (ENSMAMG00000012723) klhl38a (ENSMAMG00000012793) spire1a (ENSMAMG00000012814) Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000020306 ENSBSLG00000020316 pdcd6ip (ENSBSLG00000021280) ubp1 (ENSBSLG00000022132) clasp2 (ENSBSLG00000022768) fbxl2 (ENSBSLG00000025439) ENSBSLG00000025522 crtap (ENSBSLG00000025539) fkbp9 (ENSBSLG00000025558) RPRD1A (ENSBSLG00000025634) nfyc (ENSBSLG00000025658) KCNQ4 (ENSBSLG00000025742) cfap300 (ENSBSLG00000025795) TINAGL1 (ENSBSLG00000008337) LIM2 (ENSBSLG00000008519) UBQLN4 (ENSBSLG00000008535) #22 rab25a (ENSBSLG00000008617) #20 ZNF385D (ENSBSLG00000008655) ENSBSLG00000008658 kat2b (ENSBSLG00000008678) RAB5A (ENSBSLG00000008904) otud6b (ENSBSLG00000008994) runx1t1 (ENSBSLG00000009107) triqk (ENSBSLG00000010252) cibar1 (ENSBSLG00000010613) TRIB1 (ENSBSLG00000010679) lratd2a (ENSBSLG00000010697) fam91a1 (ENSBSLG00000010874) spire1a (ENSBSLG00000012175) ENSBSLG00000012223 ATP6V1C1 (ENSBSLG00000012246) Climbing perch MODERN SPECIES 2 ENSATEG00000015519 pdcd6ip (ENSATEG00000015499) ubp1 (ENSATEG00000015444) clasp2 (ENSATEG00000015363) fbxl2 (ENSATEG00000015310) ENSATEG00000029627 crtap (ENSATEG00000015226) fkbp9 (ENSATEG00000015195) ENSATEG00000015171 ENSATEG00000015157 ENSATEG00000015095 ENSATEG00000015023 ENSATEG00000014937 ENSATEG00000014922 ENSATEG00000025250 ENSATEG00000014859 #22 ENSATEG00000014851 #20 ZNF385D (ENSATEG00000014843) ENSATEG00000014815 ENSATEG00000014763 RAB5A (ENSATEG00000014748) otud6b (ENSATEG00000014744) ENSATEG00000014729 runx1t1 (ENSATEG00000014697) triqk (ENSATEG00000014685) cibar1 (ENSATEG00000014669) ENSATEG00000014664 lratd2a (ENSATEG00000014651) fam91a1 (ENSATEG00000014575) klhl38a (ENSATEG00000014558) spire1a (ENSATEG00000014493) Carangaria ANCESTRAL SPECIES 14 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT01030000234950 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Seriola ANCESTRAL SPECIES 12 ENSGT01100000263710 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000181982 ENSGT00950000183176.b.f ENSGT01030000234950 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Greater amberjack MODERN SPECIES 48 ubp1 (ENSSDUG00000009258) clasp2 (ENSSDUG00000009311) ENSSDUG00000009369 fbxl2 (ENSSDUG00000009383) ENSSDUG00000009403 crtap (ENSSDUG00000009411) fkbp9 (ENSSDUG00000009427) RPRD1A (ENSSDUG00000009440) ENSSDUG00000009470 nfyc (ENSSDUG00000009492) KCNQ4 (ENSSDUG00000009542) ENSSDUG00000009618 cfap300 (ENSSDUG00000009628) TINAGL1 (ENSSDUG00000009649) lim2.4 (ENSSDUG00000009670) UBQLN4 (ENSSDUG00000009691) #22 rab25a (ENSSDUG00000009735) #20 ZNF385D (ENSSDUG00000009750) ENSSDUG00000009765 kat2b (ENSSDUG00000009787) RAB5A (ENSSDUG00000009835) otud6b (ENSSDUG00000009860) ENSSDUG00000009886 runx1t1 (ENSSDUG00000009928) ENSSDUG00000009978 cibar1 (ENSSDUG00000009987) TRIB1 (ENSSDUG00000010011) lratd2a (ENSSDUG00000010026) fam91a1 (ENSSDUG00000010053) klhl38a (ENSSDUG00000010166) spire1a (ENSSDUG00000010221) Yellowtail amberjack MODERN SPECIES 2890 ENSSLDG00000010078 ubp1 (ENSSLDG00000010188) clasp2 (ENSSLDG00000010239) ENSSLDG00000010321 fbxl2 (ENSSLDG00000010355) ENSSLDG00000010419 crtap (ENSSLDG00000010447) fkbp9 (ENSSLDG00000010478) RPRD1A (ENSSLDG00000010537) ENSSLDG00000010572 nfyc (ENSSLDG00000010606) KCNQ4 (ENSSLDG00000010705) cfap300 (ENSSLDG00000010739) TINAGL1 (ENSSLDG00000010762) lim2.4 (ENSSLDG00000010807) UBQLN4 (ENSSLDG00000010839) #22 rab25a (ENSSLDG00000010880) #20 ZNF385D (ENSSLDG00000010909) ENSSLDG00000010937 kat2b (ENSSLDG00000010977) RAB5A (ENSSLDG00000011069) otud6b (ENSSLDG00000011101) ENSSLDG00000011146 runx1t1 (ENSSLDG00000011172) ENSSLDG00000011209 cibar1 (ENSSLDG00000011251) TRIB1 (ENSSLDG00000011384) lratd2a (ENSSLDG00000011397) fam91a1 (ENSSLDG00000011415) klhl38a (ENSSLDG00000011472) spire1a (ENSSLDG00000011546) Barramundi perch MODERN SPECIES 163 ENSLCAG00010008314 pdcd6ip (ENSLCAG00010008358) ubp1 (ENSLCAG00010008477) clasp2 (ENSLCAG00010008731) fbxl2 (ENSLCAG00010009485) ENSLCAG00010009488 crtap (ENSLCAG00010009497) fkbp9 (ENSLCAG00010009525) RPRD1A (ENSLCAG00010009573) ENSLCAG00010009576 nfyc (ENSLCAG00010009584) KCNQ4 (ENSLCAG00010009592) cfap300 (ENSLCAG00010009599) TINAGL1 (ENSLCAG00010009612) lim2.4 (ENSLCAG00010009621) UBQLN4 (ENSLCAG00010009627) #22 rab25a (ENSLCAG00010009636) #20 ENSLCAG00010009645 ENSLCAG00010009655 ENSLCAG00010009664 ENSLCAG00010009678 Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Tongue sole MODERN SPECIES 9 stk3 (ENSCSEG00000017359) RIDA (ENSCSEG00000017340) rpl30 (ENSCSEG00000017333) laptm4b (ENSCSEG00000017317) ENSCSEG00000017301 crtap (ENSCSEG00000017274) fkbp9 (ENSCSEG00000017244) RPRD1A (ENSCSEG00000017232) ENSCSEG00000017220 nfyc (ENSCSEG00000017202) KCNQ4 (ENSCSEG00000017158) cfap300 (ENSCSEG00000017145) TINAGL1 (ENSCSEG00000017097) lim2.4 (ENSCSEG00000017089) ENSCSEG00000017082 UBQLN4 (ENSCSEG00000017036) #22 rab25a (ENSCSEG00000017026) #20 ENSCSEG00000017005 ENSCSEG00000016989 kat2b (ENSCSEG00000016972) fbxl2 (ENSCSEG00000016957) ENSCSEG00000016948 clasp2 (ENSCSEG00000016910) ubp1 (ENSCSEG00000016364) pdcd6ip (ENSCSEG00000016266) cyhr1 (ENSCSEG00000016245) ENSCSEG00000016146 fabp3 (ENSCSEG00000016106) zcchc17 (ENSCSEG00000016039) snrnp40 (ENSCSEG00000016015) nkain1 (ENSCSEG00000016008) Turbot MODERN SPECIES 14 ENSSMAG00000010735 pdcd6ip (ENSSMAG00000010694) fkbp9 (ENSSMAG00000010666) crtap (ENSSMAG00000010631) ENSSMAG00000010596 fbxl2 (ENSSMAG00000010521) clasp2 (ENSSMAG00000010193) ubp1 (ENSSMAG00000010036) ENSSMAG00000010001 ENSSMAG00000009961 ENSSMAG00000009905 ENSSMAG00000009872 ENSSMAG00000009852 ENSSMAG00000009811 ENSSMAG00000009791 ENSSMAG00000009738 #22 ENSSMAG00000035677 #20 ZNF385D (ENSSMAG00000009709) ENSSMAG00000009694 ENSSMAG00000009616 RAB5A (ENSSMAG00000009229) otud6b (ENSSMAG00000009196) runx1t1 (ENSSMAG00000009153) ENSSMAG00000028041 cibar1 (ENSSMAG00000009032) ENSSMAG00000021701 lratd2a (ENSSMAG00000009009) fam91a1 (ENSSMAG00000008966) klhl38a (ENSSMAG00000008942) spire1a (ENSSMAG00000008849) ENSSMAG00000008838 Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000173087 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00390000005939.a.a.a ENSGT00940000156595 ENSGT00940000156206.e ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00390000013305.a.b ENSGT00940000174923 ENSGT00940000153446.a.a.w.b ENSGT00390000012138.a.b.d ENSGT00970000196427 ENSGT00940000154984.A ENSGT00940000164643 Fugu MODERN SPECIES 3 ENSTRUG00000013414 pdcd6ip (ENSTRUG00000013431) ubp1 (ENSTRUG00000013570) clasp2 (ENSTRUG00000013726) fbxl2 (ENSTRUG00000013949) ENSTRUG00000020342 crtap (ENSTRUG00000014024) fkbp9 (ENSTRUG00000014068) RPRD1A (ENSTRUG00000014193) ENSTRUG00000023414 nfyc (ENSTRUG00000014244) KCNQ4 (ENSTRUG00000014313) cfap300 (ENSTRUG00000014398) tinagl1 (ENSTRUG00000014431) LIM2 (ENSTRUG00000020756) UBQLN4 (ENSTRUG00000014502) #22 ENSTRUG00000014595 #20 atxn1a (ENSTRUG00000014645) gmpr (ENSTRUG00000014659) mylipa (ENSTRUG00000014716) ENSTRUG00000030958 dtnbp1b (ENSTRUG00000014742) jarid2b (ENSTRUG00000020124) pard6gb (ENSTRUG00000022301) bloc1s4 (ENSTRUG00000014823) rrm2b (ENSTRUG00000014830) ENSTRUG00000014877 laptm4b (ENSTRUG00000014937) rpl30 (ENSTRUG00000029279) ENSTRUG00000014973 stk3 (ENSTRUG00000015001) Tetraodon MODERN SPECIES 15 ENSTNIG00000016976 pdcd6ip (ENSTNIG00000016975) ubp1 (ENSTNIG00000016974) clasp2 (ENSTNIG00000016973) fbxl2 (ENSTNIG00000016972) ENSTNIG00000000051 crtap (ENSTNIG00000016971) fkbp9 (ENSTNIG00000016970) RPRD1A (ENSTNIG00000016969) nfyc (ENSTNIG00000016968) KCNQ4 (ENSTNIG00000003182) ENSTNIG00000000586 cfap300 (ENSTNIG00000003181) TINAGL1 (ENSTNIG00000005093) lim2.4 (ENSTNIG00000005092) UBQLN4 (ENSTNIG00000005091) #22 rab25a (ENSTNIG00000005090) #20 atxn1a (ENSTNIG00000005089) gmpr (ENSTNIG00000005088) mylipa (ENSTNIG00000005087) pard6gb (ENSTNIG00000000717) bloc1s4 (ENSTNIG00000006747) rrm2b (ENSTNIG00000006748) ENSTNIG00000001419 laptm4b (ENSTNIG00000006749) rpl30 (ENSTNIG00000000339) ENSTNIG00000009143 stk3 (ENSTNIG00000009144) spag1a (ENSTNIG00000009145) ENSTNIG00000009146 ptpn2b (ENSTNIG00000009147) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a European seabass MODERN SPECIES 22 cyhr1 (ENSDLAG00005034723) ENSDLAG00005008391 pdcd6ip (ENSDLAG00005008436) ubp1 (ENSDLAG00005009655) clasp2 (ENSDLAG00005010646) fbxl2 (ENSDLAG00005014392) ENSDLAG00005035072 crtap (ENSDLAG00005030248) fkbp9 (ENSDLAG00005014859) ENSDLAG00005033520 ENSDLAG00005015069 ENSDLAG00005015234 ENSDLAG00005015683 ENSDLAG00005015687 ENSDLAG00005015815 ENSDLAG00005015739 #22 ZNF385D (ENSDLAG00005015849) ENSDLAG00005015862 KAT2B (ENSDLAG00005015891) RAB5A (ENSDLAG00005031711) otud6b (ENSDLAG00005016415) ENSDLAG00005016437 runx1t1 (ENSDLAG00005016462) triqk (ENSDLAG00005016668) cibar1 (ENSDLAG00005018773) ENSDLAG00005034184 lratd2a (ENSDLAG00005032677) fam91a1 (ENSDLAG00005016720) klhl38a (ENSDLAG00005018787) spire1a (ENSDLAG00005018793) ENSDLAG00005018958 Large yellow croaker MODERN SPECIES 484 pdcd6ip (ENSLCRG00005010076) ubp1 (ENSLCRG00005010163) clasp2 (ENSLCRG00005011275) fbxl2 (ENSLCRG00005015042) ENSLCRG00005015641 crtap (ENSLCRG00005015650) fkbp9 (ENSLCRG00005015690) ENSLCRG00005015754 ENSLCRG00005015755 ENSLCRG00005015764 nfyc (ENSLCRG00005015798) KCNQ4 (ENSLCRG00005016017) cfap300 (ENSLCRG00005016793) TINAGL1 (ENSLCRG00005016804) LIM2 (ENSLCRG00005016837) UBQLN4 (ENSLCRG00005016844) #22 rab25a (ENSLCRG00005016847) #20 ZNF385D (ENSLCRG00005016858) ENSLCRG00005016859 kat2b (ENSLCRG00005016958) RAB5A (ENSLCRG00005017604) otud6b (ENSLCRG00005017614) ENSLCRG00005017619 runx1t1 (ENSLCRG00005017684) ENSLCRG00005018296 cibar1 (ENSLCRG00005018310) TRIB1 (ENSLCRG00005018322) lratd2a (ENSLCRG00005018326) fam91a1 (ENSLCRG00005018352) klhl38a (ENSLCRG00005018391) spire1a (ENSLCRG00005018432) Gilthead seabream MODERN SPECIES 17 ENSSAUG00010004265 pdcd6ip (ENSSAUG00010002858) ubp1 (ENSSAUG00010002759) clasp2 (ENSSAUG00010000585) fbxl2 (ENSSAUG00010000374) ENSSAUG00010000362 crtap (ENSSAUG00010000356) fkbp9 (ENSSAUG00010000230) RPRD1A (ENSSAUG00010000139) ENSSAUG00010009647 nfyc (ENSSAUG00010009601) KCNQ4 (ENSSAUG00010009139) cfap300 (ENSSAUG00010009123) tinagl1 (ENSSAUG00010009103) LIM2 (ENSSAUG00010009090) UBQLN4 (ENSSAUG00010009085) #22 rab25a (ENSSAUG00010009077) #20 ZNF385D (ENSSAUG00010009072) ENSSAUG00010009067 kat2b (ENSSAUG00010009062) RAB5A (ENSSAUG00010009052) otud6b (ENSSAUG00010009048) ENSSAUG00010009037 runx1t1 (ENSSAUG00010008971) ENSSAUG00010008961 cibar1 (ENSSAUG00010008960) TRIB1 (ENSSAUG00010008959) lratd2a (ENSSAUG00010008954) fam91a1 (ENSSAUG00010006512) klhl38a (ENSSAUG00010006457) spire1a (ENSSAUG00010005981) Perciformes ANCESTRAL SPECIES 11 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000161019 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000161019 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Lumpfish MODERN SPECIES 2 ubp1 (ENSCLMG00005017688) clasp2 (ENSCLMG00005004231) fbxl2 (ENSCLMG00005003596) ENSCLMG00005003579 crtap (ENSCLMG00005003578) fkbp9 (ENSCLMG00005003305) RPRD1A (ENSCLMG00005003296) ENSCLMG00005003294 nfyc (ENSCLMG00005003265) KCNQ4 (ENSCLMG00005003246) imp4 (ENSCLMG00005003227) cfap300 (ENSCLMG00005003216) TINAGL1 (ENSCLMG00005002619) ENSCLMG00005002608 LIM2 (ENSCLMG00005002607) UBQLN4 (ENSCLMG00005002604) #22 rab25a (ENSCLMG00005002601) #20 ZNF385D (ENSCLMG00005002596) ENSCLMG00005002593 kat2b (ENSCLMG00005002571) RAB5A (ENSCLMG00005002566) otud6b (ENSCLMG00005002565) ENSCLMG00005002564 runx1t1 (ENSCLMG00005001825) triqk (ENSCLMG00005001808) cibar1 (ENSCLMG00005001806) TRIB1 (ENSCLMG00005001804) lratd2a (ENSCLMG00005001802) fam91a1 (ENSCLMG00005001778) klhl38a (ENSCLMG00005001760) spire1a (ENSCLMG00005001728) Stickleback MODERN SPECIES 9 gmnn (ENSGACG00000004689) ripor2 (ENSGACG00000004704) si:dkeyp-120h9.1 (ENSGACG00000004716) ENSGACG00000004761 ENSGACG00000004762 ENSGACG00000004765 crtap (ENSGACG00000004769) fkbp9 (ENSGACG00000004796) RPRD1A (ENSGACG00000004817) ENSGACG00000004837 nfyc (ENSGACG00000004846) KCNQ4 (ENSGACG00000004872) cfap300 (ENSGACG00000004879) TINAGL1 (ENSGACG00000004892) LIM2 (ENSGACG00000004952) UBQLN4 (ENSGACG00000004959) #22 rab25a (ENSGACG00000004965) #20 ZNF385D (ENSGACG00000004976) ENSGACG00000004980 kat2b (ENSGACG00000004986) RAB5A (ENSGACG00000004997) otud6b (ENSGACG00000005002) ENSGACG00000005052 runx1t1 (ENSGACG00000005059) cibar1 (ENSGACG00000005082) TRIB1 (ENSGACG00000005101) fam91a1 (ENSGACG00000005113) klhl38a (ENSGACG00000005128) spire1a (ENSGACG00000005147) ATP6V1C1 (ENSGACG00000005164) azin1b (ENSGACG00000005185) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000161019 ENSGT00950000183176.b.f ENSGT01030000234950 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Pike perch MODERN SPECIES 41 ENSSLUG00000024666 pdcd6ip (ENSSLUG00000001521) ubp1 (ENSSLUG00000001764) clasp2 (ENSSLUG00000002212) fbxl2 (ENSSLUG00000007401) ENSSLUG00000007630 crtap (ENSSLUG00000007641) fkbp9 (ENSSLUG00000007663) RPRD1A (ENSSLUG00000007758) ENSSLUG00000007770 nfyc (ENSSLUG00000007788) KCNQ4 (ENSSLUG00000007900) cfap300 (ENSSLUG00000007927) TINAGL1 (ENSSLUG00000007965) lim2.4 (ENSSLUG00000009042) UBQLN4 (ENSSLUG00000009055) #22 rab25a (ENSSLUG00000009075) #20 ZNF385D (ENSSLUG00000009085) ENSSLUG00000009098 kat2b (ENSSLUG00000009183) RAB5A (ENSSLUG00000010063) otud6b (ENSSLUG00000010073) ENSSLUG00000010079 runx1t1 (ENSSLUG00000010101) ENSSLUG00000010402 ENSSLUG00000010405 cibar1 (ENSSLUG00000010406) Channel bull blenny MODERN SPECIES 2 cyhr1 (ENSCGOG00000017786) ENSCGOG00000017791 pdcd6ip (ENSCGOG00000017809) ubp1 (ENSCGOG00000018343) clasp2 (ENSCGOG00000018571) fbxl2 (ENSCGOG00000023220) crtap (ENSCGOG00000023232) fkbp9 (ENSCGOG00000023235) RPRD1A (ENSCGOG00000023284) ENSCGOG00000023288 nfyc (ENSCGOG00000023296) KCNQ4 (ENSCGOG00000023303) cfap300 (ENSCGOG00000023333) TINAGL1 (ENSCGOG00000023343) LIM2 (ENSCGOG00000023346) UBQLN4 (ENSCGOG00000023348) #22 rab25a (ENSCGOG00000023367) #20 ZNF385D (ENSCGOG00000023368) ENSCGOG00000023369 kat2b (ENSCGOG00000023382) RAB5A (ENSCGOG00000023540) otud6b (ENSCGOG00000023552) ENSCGOG00000023553 runx1t1 (ENSCGOG00000023558) ENSCGOG00000023604 cibar1 (ENSCGOG00000023610) TRIB1 (ENSCGOG00000023614) lratd2a (ENSCGOG00000023615) fam91a1 (ENSCGOG00000023633) klhl38a (ENSCGOG00000023822) spire1a (ENSCGOG00000023833) Ballan wrasse MODERN SPECIES 539 nfyc (ENSLBEG00000001936) KCNQ4 (ENSLBEG00000002107) cfap300 (ENSLBEG00000002224) TINAGL1 (ENSLBEG00000002245) LIM2 (ENSLBEG00000002300) UBQLN4 (ENSLBEG00000002320) #22 rab25a (ENSLBEG00000002367) #20 ZNF385D (ENSLBEG00000002390) ENSLBEG00000002405 kat2b (ENSLBEG00000002439) RAB5A (ENSLBEG00000002516) ENSLBEG00000002543 ENSLBEG00000002570 runx1t1 (ENSLBEG00000002616) Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00940000166759 ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Mangrove rivulus MODERN SPECIES 2 ENSKMAG00000004052 pdcd6ip (ENSKMAG00000004128) ubp1 (ENSKMAG00000004223) clasp2 (ENSKMAG00000004284) fbxl2 (ENSKMAG00000004442) ENSKMAG00000004514 crtap (ENSKMAG00000004531) fkbp9 (ENSKMAG00000004544) dnal1 (ENSKMAG00000004577) RPRD1A (ENSKMAG00000004597) nfyc (ENSKMAG00000004636) KCNQ4 (ENSKMAG00000004704) cfap300 (ENSKMAG00000004758) TINAGL1 (ENSKMAG00000004823) LIM2 (ENSKMAG00000004882) UBQLN4 (ENSKMAG00000004904) #22 rab25a (ENSKMAG00000004945) #20 ZNF385D (ENSKMAG00000004957) ENSKMAG00000004974 kat2b (ENSKMAG00000005023) RAB5A (ENSKMAG00000005111) ENSKMAG00000005130 ENSKMAG00000005159 ENSKMAG00000005172 ENSKMAG00000005189 runx1t1 (ENSKMAG00000005217) triqk (ENSKMAG00000005257) cibar1 (ENSKMAG00000005279) TRIB1 (ENSKMAG00000005319) lratd2a (ENSKMAG00000005326) fam91a1 (ENSKMAG00000005370) Turquoise killifish MODERN SPECIES 1628 fbxl2 (ENSNFUG00015020172) ENSNFUG00015020165 crtap (ENSNFUG00015020158) fkbp9 (ENSNFUG00015020111) DNAL1 (ENSNFUG00015020100) ENSNFUG00015020094 RPRD1A (ENSNFUG00015020073) ENSNFUG00015020066 NFYC (ENSNFUG00015020051) KCNQ4 (ENSNFUG00015019359) cfap300 (ENSNFUG00015019344) vamp8 (ENSNFUG00015019343) ncaph (ENSNFUG00015019332) TINAGL1 (ENSNFUG00015019296) LIM2 (ENSNFUG00015019294) UBQLN4 (ENSNFUG00015019223) #22 rab25a (ENSNFUG00015019204) #20 ZNF385D (ENSNFUG00015019197) ENSNFUG00015019192 kat2b (ENSNFUG00015018758) RAB5AA (ENSNFUG00015018732) OTUD6B (ENSNFUG00015018725) runx1t1 (ENSNFUG00015018373) TRIQK (ENSNFUG00015018355) RBM24A (ENSNFUG00015018351) CAP2 (ENSNFUG00015017505) ENSNFUG00015017450 VPS28 (ENSNFUG00015017422) mapk15 (ENSNFUG00015017393) GRINA (ENSNFUG00015017387) ENSNFUG00015017376 Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT01030000234601.n.a.a.b.b ENSGT00940000164558.k ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT01030000234601.n.a.a.b.b ENSGT00940000164558.k ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c Poecilia ANCESTRAL SPECIES 24 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT01030000234601.n.a.a.b.b ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a NAME_6 ANCESTRAL SPECIES 21 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT01030000234601.n.a.a.b.b ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Sailfin molly MODERN SPECIES 658 RPRD1A (ENSPLAG00000003864) ENSPLAG00000003850 nfyc (ENSPLAG00000003840) KCNQ4 (ENSPLAG00000003796) ENSPLAG00000003767 cfap300 (ENSPLAG00000003735) TINAGL1 (ENSPLAG00000003671) LIM2 (ENSPLAG00000003623) UBQLN4 (ENSPLAG00000000058) #22 rab25a (ENSPLAG00000003558) #20 Amazon molly MODERN SPECIES 273 ubp1 (ENSPFOG00000008378) clasp2 (ENSPFOG00000008615) fbxl2 (ENSPFOG00000009205) ENSPFOG00000009319 crtap (ENSPFOG00000009354) fkbp9 (ENSPFOG00000009499) dnal1 (ENSPFOG00000009636) ENSPFOG00000022972 RPRD1A (ENSPFOG00000009698) ENSPFOG00000009758 nfyc (ENSPFOG00000009785) KCNQ4 (ENSPFOG00000009977) cfap300 (ENSPFOG00000010433) TINAGL1 (ENSPFOG00000024014) LIM2 (ENSPFOG00000010498) UBQLN4 (ENSPFOG00000010520) #22 rab25a (ENSPFOG00000010632) #20 ZNF385D (ENSPFOG00000010672) ENSPFOG00000010790 kat2b (ENSPFOG00000010842) RAB5A (ENSPFOG00000011263) otud6b (ENSPFOG00000011303) ENSPFOG00000011360 ENSPFOG00000011364 runx1t1 (ENSPFOG00000011423) triqk (ENSPFOG00000011703) cibar1 (ENSPFOG00000011718) TRIB1 (ENSPFOG00000011808) lratd2a (ENSPFOG00000020065) lratd2a (ENSPFOG00000020066) fam91a1 (ENSPFOG00000011838) Guppy MODERN SPECIES 441 pdcd6ip (ENSPREG00000005420) ubp1 (ENSPREG00000005474) clasp2 (ENSPREG00000005520) fbxl2 (ENSPREG00000005611) ENSPREG00000005667 crtap (ENSPREG00000005707) fkbp9 (ENSPREG00000005728) dnal1 (ENSPREG00000005740) RPRD1A (ENSPREG00000005762) ENSPREG00000005783 nfyc (ENSPREG00000005805) KCNQ4 (ENSPREG00000005859) cfap300 (ENSPREG00000005910) TINAGL1 (ENSPREG00000005972) LIM2 (ENSPREG00000006002) UBQLN4 (ENSPREG00000006021) #22 rab25a (ENSPREG00000006119) #20 ENSPREG00000006413 ENSPREG00000006434 kat2b (ENSPREG00000006463) ENSPREG00000006527 otud6b (ENSPREG00000006541) ENSPREG00000006593 ENSPREG00000006614 runx1t1 (ENSPREG00000006632) ENSPREG00000006676 cibar1 (ENSPREG00000006693) TRIB1 (ENSPREG00000006742) lratd2a (ENSPREG00000006753) fam91a1 (ENSPREG00000006792) klhl38a (ENSPREG00000006908) Platyfish MODERN SPECIES 4 clasp2 (ENSXMAG00000003043) ENSXMAG00000022442 fbxl2 (ENSXMAG00000003112) ENSXMAG00000026756 ENSXMAG00000029488 crtap (ENSXMAG00000003153) fkbp9 (ENSXMAG00000003160) dnal1 (ENSXMAG00000028736) RPRD1A (ENSXMAG00000003172) ENSXMAG00000003178 nfyc (ENSXMAG00000003179) KCNQ4 (ENSXMAG00000003184) cfap300 (ENSXMAG00000007924) TINAGL1 (ENSXMAG00000003194) LIM2 (ENSXMAG00000003204) UBQLN4 (ENSXMAG00000003208) #22 rab25a (ENSXMAG00000003233) #20 ZNF385D (ENSXMAG00000026238) ENSXMAG00000003247 kat2b (ENSXMAG00000003253) RAB5A (ENSXMAG00000028889) otud6b (ENSXMAG00000003276) ENSXMAG00000003286 runx1t1 (ENSXMAG00000029124) triqk (ENSXMAG00000027609) cibar1 (ENSXMAG00000003312) ENSXMAG00000023013 TRIB1 (ENSXMAG00000003315) lratd2a (ENSXMAG00000020332) fam91a1 (ENSXMAG00000003318) klhl38a (ENSXMAG00000003337) NAME_4 ANCESTRAL SPECIES 10 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b.f ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT01030000234601.n.a.a.b.b.f ENSGT00940000164558.k ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c Sheepshead minnow MODERN SPECIES 183 pdcd6ip (ENSCVAG00000007264) ubp1 (ENSCVAG00000000202) clasp2 (ENSCVAG00000007610) fbxl2 (ENSCVAG00000007633) ENSCVAG00000007654 crtap (ENSCVAG00000007675) fkbp9 (ENSCVAG00000007686) dnal1 (ENSCVAG00000007704) RPRD1A (ENSCVAG00000007732) ENSCVAG00000007740 nfyc (ENSCVAG00000007788) KCNQ4 (ENSCVAG00000007920) cfap300 (ENSCVAG00000008000) TINAGL1 (ENSCVAG00000008044) lim2.4 (ENSCVAG00000000221) UBQLN4 (ENSCVAG00000008099) #22 rab25a (ENSCVAG00000008126) #20 ZNF385D (ENSCVAG00000008136) ENSCVAG00000008142 kat2b (ENSCVAG00000008211) RAB5A (ENSCVAG00000008239) otud6b (ENSCVAG00000008258) ENSCVAG00000008267 Mummichog MODERN SPECIES 2253 ENSFHEG00000014691 ENSFHEG00000014681 crtap (ENSFHEG00000014662) fkbp9 (ENSFHEG00000014633) dnal1 (ENSFHEG00000014589) ENSFHEG00000014531 RPRD1A (ENSFHEG00000014516) nfyc (ENSFHEG00000014493) KCNQ4 (ENSFHEG00000000825) cfap300 (ENSFHEG00000014297) TINAGL1 (ENSFHEG00000014281) LIM2 (ENSFHEG00000014247) UBQLN4 (ENSFHEG00000014233) #22 rab25a (ENSFHEG00000014186) #20 ENSFHEG00000014162 ENSFHEG00000014149 kat2b (ENSFHEG00000014137) ENSFHEG00000014070 otud6b (ENSFHEG00000014034) ENSFHEG00000013970 ENSFHEG00000013950 runx1t1 (ENSFHEG00000013941) ENSFHEG00000013908 triqk (ENSFHEG00000013899) cibar1 (ENSFHEG00000013881) TRIB1 (ENSFHEG00000013845) lratd2a (ENSFHEG00000013840) fam91a1 (ENSFHEG00000013823) Oryzias ANCESTRAL SPECIES 22 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Oryzias_a ANCESTRAL SPECIES 18 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT01030000234950 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Japanese Medaka HdrR MODERN SPECIES 2 pdcd6ip (ENSORLG00000011651) ubp1 (ENSORLG00000011706) clasp2 (ENSORLG00000011760) fbxl2 (ENSORLG00000011797) ENSORLG00000027239 crtap (ENSORLG00000011852) fkbp9 (ENSORLG00000011880) dnal1 (ENSORLG00000011890) RPRD1A (ENSORLG00000011917) ENSORLG00000011943 nfyc (ENSORLG00000012000) KCNQ4 (ENSORLG00000012041) cfap300 (ENSORLG00000012056) TINAGL1 (ENSORLG00000012101) ENSORLG00000012119 UBQLN4 (ENSORLG00000022806) #22 rab25a (ENSORLG00000012158) #20 ZNF385D (ENSORLG00000012168) sgo1 (ENSORLG00000012177) kat2b (ENSORLG00000012238) RAB5A (ENSORLG00000012261) otud6b (ENSORLG00000012290) runx1t1 (ENSORLG00000012311) triqk (ENSORLG00000030092) ENSORLG00000026495 cibar1 (ENSORLG00000012324) ENSORLG00000012333 lratd2a (ENSORLG00000012339) fam91a1 (ENSORLG00000012371) klhl38a (ENSORLG00000012386) spire1a (ENSORLG00000012450) Chinese medaka MODERN SPECIES 13 zcchc17 (ENSOSIG00000008189) clasp2 (ENSOSIG00000006729) fbxl2 (ENSOSIG00000006691) ENSOSIG00000006686 ENSOSIG00000006685 crtap (ENSOSIG00000006684) fkbp9 (ENSOSIG00000006497) dnal1 (ENSOSIG00000006492) RPRD1A (ENSOSIG00000006488) ENSOSIG00000006483 nfyc (ENSOSIG00000006441) KCNQ4 (ENSOSIG00000006071) cfap300 (ENSOSIG00000006056) TINAGL1 (ENSOSIG00000006018) LIM2 (ENSOSIG00000006016) UBQLN4 (ENSOSIG00000006015) #22 rab25a (ENSOSIG00000006014) #20 ENSOSIG00000006012 ENSOSIG00000006010 kat2b (ENSOSIG00000005983) ENSOSIG00000005981 ENSOSIG00000005978 runx1t1 (ENSOSIG00000005853) ENSOSIG00000005843 ENSOSIG00000005842 cibar1 (ENSOSIG00000005841) TRIB1 (ENSOSIG00000005839) lratd2a (ENSOSIG00000005835) fam91a1 (ENSOSIG00000005825) klhl38a (ENSOSIG00000005813) spire1a (ENSOSIG00000005680) Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Javanese ricefish MODERN SPECIES 2 pdcd6ip (ENSOJAG00000016848) ubp1 (ENSOJAG00000016569) clasp2 (ENSOJAG00000014769) fbxl2 (ENSOJAG00000014384) ENSOJAG00000014328 crtap (ENSOJAG00000014314) fkbp9 (ENSOJAG00000014101) dnal1 (ENSOJAG00000014068) RPRD1A (ENSOJAG00000014045) ENSOJAG00000014033 nfyc (ENSOJAG00000013876) KCNQ4 (ENSOJAG00000012989) cfap300 (ENSOJAG00000012913) TINAGL1 (ENSOJAG00000012826) LIM2 (ENSOJAG00000012774) UBQLN4 (ENSOJAG00000012728) #22 rab25a (ENSOJAG00000012701) #20 ENSOJAG00000012684 ENSOJAG00000012666 kat2b (ENSOJAG00000012098) ENSOJAG00000012005 otud6b (ENSOJAG00000011997) runx1t1 (ENSOJAG00000011709) ENSOJAG00000011664 triqk (ENSOJAG00000011659) cibar1 (ENSOJAG00000011640) TRIB1 (ENSOJAG00000011629) lratd2a (ENSOJAG00000011622) fam91a1 (ENSOJAG00000011512) klhl38a (ENSOJAG00000011481) spire1a (ENSOJAG00000011357) Indian medaka MODERN SPECIES 3 pdcd6ip (ENSOMEG00000009710) ubp1 (ENSOMEG00000009863) clasp2 (ENSOMEG00000009947) fbxl2 (ENSOMEG00000000241) ENSOMEG00000010051 crtap (ENSOMEG00000010081) fkbp9 (ENSOMEG00000010099) ENSOMEG00000010121 RPRD1A (ENSOMEG00000010157) ENSOMEG00000010192 nfyc (ENSOMEG00000010270) KCNQ4 (ENSOMEG00000010348) cfap300 (ENSOMEG00000010381) TINAGL1 (ENSOMEG00000010435) lim2.4 (ENSOMEG00000010467) UBQLN4 (ENSOMEG00000010492) #22 rab25a (ENSOMEG00000010510) #20 ZNF385D (ENSOMEG00000010535) ENSOMEG00000010604 kat2b (ENSOMEG00000010646) RAB5A (ENSOMEG00000010692) otud6b (ENSOMEG00000010735) runx1t1 (ENSOMEG00000010840) triqk (ENSOMEG00000010883) cibar1 (ENSOMEG00000010893) TRIB1 (ENSOMEG00000010903) lratd2a (ENSOMEG00000010918) fam91a1 (ENSOMEG00000011027) klhl38a (ENSOMEG00000011069) spire1a (ENSOMEG00000011380) ATP6V1C1 (ENSOMEG00000011507) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00980000199767 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c Amphiprion ANCESTRAL SPECIES 16 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00940000164463 ENSGT00980000199767 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c Orange clownfish MODERN SPECIES 8 pdcd6ip (ENSAPEG00000014219) ubp1 (ENSAPEG00000014146) clasp2 (ENSAPEG00000014025) ENSAPEG00000013984 fbxl2 (ENSAPEG00000013957) ENSAPEG00000013933 crtap (ENSAPEG00000013897) fkbp9 (ENSAPEG00000013853) RPRD1A (ENSAPEG00000013832) ENSAPEG00000013806 nfyc (ENSAPEG00000013755) KCNQ4 (ENSAPEG00000013703) cfap300 (ENSAPEG00000013640) TINAGL1 (ENSAPEG00000013606) LIM2 (ENSAPEG00000013579) UBQLN4 (ENSAPEG00000013530) #22 rab25a (ENSAPEG00000013500) #20 ZNF385D (ENSAPEG00000013490) ENSAPEG00000013460 kat2b (ENSAPEG00000013389) RAB5A (ENSAPEG00000013376) otud6b (ENSAPEG00000013341) ENSAPEG00000013297 runx1t1 (ENSAPEG00000013263) triqk (ENSAPEG00000013161) cibar1 (ENSAPEG00000013141) TRIB1 (ENSAPEG00000013133) lratd2a (ENSAPEG00000013116) fam91a1 (ENSAPEG00000013030) klhl38a (ENSAPEG00000012991) spire1a (ENSAPEG00000012862) Clown anemonefish MODERN SPECIES 1714 pdcd6ip (ENSAOCG00000003825) ubp1 (ENSAOCG00000003792) clasp2 (ENSAOCG00000003757) ENSAOCG00000002694 fbxl2 (ENSAOCG00000003718) ENSAOCG00000003703 crtap (ENSAOCG00000003683) fkbp9 (ENSAOCG00000003677) RPRD1A (ENSAOCG00000003657) ENSAOCG00000003645 nfyc (ENSAOCG00000003630) KCNQ4 (ENSAOCG00000003594) cfap300 (ENSAOCG00000003573) TINAGL1 (ENSAOCG00000003561) LIM2 (ENSAOCG00000003553) UBQLN4 (ENSAOCG00000000096) #22 rab25a (ENSAOCG00000003528) #20 ZNF385D (ENSAOCG00000003515) ENSAOCG00000003496 kat2b (ENSAOCG00000003484) RAB5A (ENSAOCG00000000090) otud6b (ENSAOCG00000003456) ENSAOCG00000003446 Spiny chromis MODERN SPECIES 955 nfyc (ENSAPOG00000020994) KCNQ4 (ENSAPOG00000021087) cfap300 (ENSAPOG00000021099) TINAGL1 (ENSAPOG00000021153) LIM2 (ENSAPOG00000021185) UBQLN4 (ENSAPOG00000021229) #22 rab25a (ENSAPOG00000021268) #20 ZNF385D (ENSAPOG00000021285) ENSAPOG00000021305 kat2b (ENSAPOG00000021362) RAB5A (ENSAPOG00000021391) otud6b (ENSAPOG00000021426) ENSAPOG00000021453 Bicolor damselfish MODERN SPECIES 282 cfap300 (ENSSPAG00000015942) TINAGL1 (ENSSPAG00000015885) LIM2 (ENSSPAG00000015867) UBQLN4 (ENSSPAG00000015830) #22 rab25a (ENSSPAG00000015817) #20 ZNF385D (ENSSPAG00000015801) ENSSPAG00000015783 kat2b (ENSSPAG00000015695) RAB5A (ENSSPAG00000015678) otud6b (ENSSPAG00000015659) ENSSPAG00000015641 runx1t1 (ENSSPAG00000015609) triqk (ENSSPAG00000015599) cibar1 (ENSSPAG00000015509) TRIB1 (ENSSPAG00000015496) lratd2a (ENSSPAG00000015483) fam91a1 (ENSSPAG00000015408) klhl38a (ENSSPAG00000015388) spire1a (ENSSPAG00000015345) Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Burton s mouthbrooder MODERN SPECIES 288 RPRD1A (ENSHBUG00000004298) ENSHBUG00000004268 nfyc (ENSHBUG00000004235) KCNQ4 (ENSHBUG00000004142) cfap300 (ENSHBUG00000004068) TINAGL1 (ENSHBUG00000003993) lim2.4 (ENSHBUG00000003933) UBQLN4 (ENSHBUG00000003919) #22 rab25a (ENSHBUG00000003876) #20 ZNF385D (ENSHBUG00000003857) ENSHBUG00000003842 kat2b (ENSHBUG00000003802) RAB5A (ENSHBUG00000003752) otud6b (ENSHBUG00000003747) runx1t1 (ENSHBUG00000003721) triqk (ENSHBUG00000003679) cibar1 (ENSHBUG00000003662) TRIB1 (ENSHBUG00000003590) lratd2a (ENSHBUG00000003578) fam91a1 (ENSHBUG00000003560) klhl38a (ENSHBUG00000003495) spire1a (ENSHBUG00000003464) ENSHBUG00000003413 Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00390000018258 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 P. nyererei MODERN SPECIES 323 cyhr1 (ENSPNYG00000009822) pdcd6ip (ENSPNYG00000009865) ubp1 (ENSPNYG00000009934) clasp2 (ENSPNYG00000009999) ENSPNYG00000010075 fbxl2 (ENSPNYG00000010086) ENSPNYG00000010102 crtap (ENSPNYG00000010124) fkbp9 (ENSPNYG00000010146) RPRD1A (ENSPNYG00000010221) nfyc (ENSPNYG00000010254) KCNQ4 (ENSPNYG00000010332) cfap300 (ENSPNYG00000010375) TINAGL1 (ENSPNYG00000010424) lim2.4 (ENSPNYG00000010457) UBQLN4 (ENSPNYG00000010469) #22 rab25a (ENSPNYG00000010491) #20 ENSPNYG00000010506 kat2b (ENSPNYG00000010541) ENSPNYG00000010612 otud6b (ENSPNYG00000010630) runx1t1 (ENSPNYG00000010652) triqk (ENSPNYG00000010706) cibar1 (ENSPNYG00000010722) TRIB1 (ENSPNYG00000010744) lratd2a (ENSPNYG00000010751) fam91a1 (ENSPNYG00000010766) klhl38a (ENSPNYG00000010808) spire1a (ENSPNYG00000010820) ENSPNYG00000010856 ATP6V1C1 (ENSPNYG00000010871) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000155574.A ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT00390000017350 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00940000159198.g ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Zebra mbuna MODERN SPECIES 1104 ubp1 (ENSMZEG00005005665) clasp2 (ENSMZEG00005005622) ENSMZEG00005005615 fbxl2 (ENSMZEG00005005587) ENSMZEG00005005568 crtap (ENSMZEG00005005549) fkbp9 (ENSMZEG00005005536) ENSMZEG00005005529 RPRD1A (ENSMZEG00005005518) ENSMZEG00005005503 nfyc (ENSMZEG00005005451) KCNQ4 (ENSMZEG00005005425) cfap300 (ENSMZEG00005005410) TINAGL1 (ENSMZEG00005005377) lim2.4 (ENSMZEG00005005355) UBQLN4 (ENSMZEG00005005334) #22 rab25a (ENSMZEG00005005311) #20 ZNF385D (ENSMZEG00005005294) ENSMZEG00005005278 kat2b (ENSMZEG00005005213) RAB5A (ENSMZEG00005005205) otud6b (ENSMZEG00005005182) runx1t1 (ENSMZEG00005005142) triqk (ENSMZEG00005005113) cibar1 (ENSMZEG00005005095) TRIB1 (ENSMZEG00005005082) lratd2a (ENSMZEG00005005078) fam91a1 (ENSMZEG00005005037) klhl38a (ENSMZEG00005005032) spire1a (ENSMZEG00005004933) ENSMZEG00005004890 Eastern happy MODERN SPECIES 13 ubp1 (ENSACLG00000018955) clasp2 (ENSACLG00000018864) ENSACLG00000018853 fbxl2 (ENSACLG00000018784) ENSACLG00000018751 crtap (ENSACLG00000018729) fkbp9 (ENSACLG00000018661) ENSACLG00000018626 RPRD1A (ENSACLG00000018571) ENSACLG00000018542 nfyc (ENSACLG00000018486) KCNQ4 (ENSACLG00000018427) cfap300 (ENSACLG00000018413) TINAGL1 (ENSACLG00000018345) lim2.4 (ENSACLG00000018324) UBQLN4 (ENSACLG00000018287) #22 rab25a (ENSACLG00000018262) #20 ZNF385D (ENSACLG00000018233) ENSACLG00000018207 kat2b (ENSACLG00000018091) RAB5A (ENSACLG00000018066) otud6b (ENSACLG00000018028) ENSACLG00000018022 runx1t1 (ENSACLG00000017970) triqk (ENSACLG00000017940) cibar1 (ENSACLG00000017875) TRIB1 (ENSACLG00000017865) lratd2a (ENSACLG00000017847) fam91a1 (ENSACLG00000017738) klhl38a (ENSACLG00000017725) spire1a (ENSACLG00000017550) Lyretail cichlid MODERN SPECIES 302 ubp1 (ENSNBRG00000010962) clasp2 (ENSNBRG00000011064) ENSNBRG00000011151 fbxl2 (ENSNBRG00000011161) ENSNBRG00000011187 crtap (ENSNBRG00000011216) fkbp9 (ENSNBRG00000011237) RPRD1A (ENSNBRG00000011271) ENSNBRG00000011302 nfyc (ENSNBRG00000011317) KCNQ4 (ENSNBRG00000011392) cfap300 (ENSNBRG00000011441) ENSNBRG00000011490 TINAGL1 (ENSNBRG00000011501) lim2.4 (ENSNBRG00000011542) UBQLN4 (ENSNBRG00000011567) #22 rab25a (ENSNBRG00000011607) #20 ZNF385D (ENSNBRG00000011627) ENSNBRG00000011645 kat2b (ENSNBRG00000011694) RAB5A (ENSNBRG00000011763) otud6b (ENSNBRG00000011773) runx1t1 (ENSNBRG00000011794) triqk (ENSNBRG00000011829) cibar1 (ENSNBRG00000011840) TRIB1 (ENSNBRG00000011861) lratd2a (ENSNBRG00000011869) fam91a1 (ENSNBRG00000011886) klhl38a (ENSNBRG00000011948) spire1a (ENSNBRG00000011963) ENSNBRG00000012012 Nile tilapia MODERN SPECIES 13 ENSONIG00000002315 pdcd6ip (ENSONIG00000002317) ubp1 (ENSONIG00000002320) clasp2 (ENSONIG00000002323) fbxl2 (ENSONIG00000002355) ENSONIG00000002361 crtap (ENSONIG00000002363) fkbp9 (ENSONIG00000002364) RPRD1A (ENSONIG00000002368) ENSONIG00000040100 nfyc (ENSONIG00000002373) KCNQ4 (ENSONIG00000002385) cfap300 (ENSONIG00000002387) TINAGL1 (ENSONIG00000002394) LIM2 (ENSONIG00000016373) UBQLN4 (ENSONIG00000002403) #22 rab25a (ENSONIG00000027893) #20 ENSONIG00000002414 ENSONIG00000002417 kat2b (ENSONIG00000002420) otud6b (ENSONIG00000002430) runx1t1 (ENSONIG00000002435) triqk (ENSONIG00000038292) cibar1 (ENSONIG00000002446) TRIB1 (ENSONIG00000033303) lratd2a (ENSONIG00000020847) ENSONIG00000033671 fam91a1 (ENSONIG00000002456) klhl38a (ENSONIG00000002463) spire1a (ENSONIG00000002465) ENSONIG00000028609 Midas cichlid MODERN SPECIES 1257 cyhr1 (ENSACIG00000020337) pdcd6ip (ENSACIG00000020302) ubp1 (ENSACIG00000020276) clasp2 (ENSACIG00000020207) ENSACIG00000020193 fbxl2 (ENSACIG00000020167) ENSACIG00000020151 crtap (ENSACIG00000020022) fkbp9 (ENSACIG00000019991) RPRD1A (ENSACIG00000019980) nfyc (ENSACIG00000019950) KCNQ4 (ENSACIG00000019926) cfap300 (ENSACIG00000019886) TINAGL1 (ENSACIG00000019865) LIM2 (ENSACIG00000019855) UBQLN4 (ENSACIG00000019826) #22 rab25a (ENSACIG00000019803) #20 ZNF385D (ENSACIG00000019786) ENSACIG00000019765 kat2b (ENSACIG00000019715) RAB5A (ENSACIG00000019251) otud6b (ENSACIG00000019192) runx1t1 (ENSACIG00000019175) triqk (ENSACIG00000019162) Tiger tail seahorse MODERN SPECIES 462 poc1bl (ENSHCOG00000013460) ENSHCOG00000013443 gabbr2 (ENSHCOG00000013426) elp2 (ENSHCOG00000013399) ctnnal1 (ENSHCOG00000013362) abitram (ENSHCOG00000013319) sla1a (ENSHCOG00000013306) ccn4a (ENSHCOG00000013291) ndrg1a (ENSHCOG00000013279) tube1 (ENSHCOG00000013250) RPRD1A (ENSHCOG00000013245) ENSHCOG00000013227 nfyc (ENSHCOG00000013215) KCNQ4 (ENSHCOG00000013175) TINAGL1 (ENSHCOG00000000380) UBQLN4 (ENSHCOG00000013142) #22 rab25a (ENSHCOG00000013095) #20 ENSHCOG00000013087 kat2b (ENSHCOG00000013077) spire1a (ENSHCOG00000013060) fam91a1 (ENSHCOG00000013032) LRATD2 (ENSHCOG00000012980) ENSHCOG00000012950 triqk (ENSHCOG00000012940) runx1t1 (ENSHCOG00000012907) Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005023046 pdcd6ip (ENSMMDG00005023041) ubp1 (ENSMMDG00005023022) clasp2 (ENSMMDG00005006593) fbxl2 (ENSMMDG00005005496) ENSMMDG00005005478 crtap (ENSMMDG00005005477) fkbp9 (ENSMMDG00005005387) RPRD1A (ENSMMDG00005005356) ENSMMDG00005005350 nfyc (ENSMMDG00005004862) KCNQ4 (ENSMMDG00005004827) cfap300 (ENSMMDG00005004822) TINAGL1 (ENSMMDG00005004814) LIM2 (ENSMMDG00005004800) UBQLN4 (ENSMMDG00005004392) #22 rab25a (ENSMMDG00005004352) #20 ZNF385D (ENSMMDG00005004342) ENSMMDG00005004330 kat2b (ENSMMDG00005004318) RAB5A (ENSMMDG00005004293) otud6b (ENSMMDG00005004276) runx1t1 (ENSMMDG00005003488) triqk (ENSMMDG00005003468) cibar1 (ENSMMDG00005003462) TRIB1 (ENSMMDG00005003459) lratd2a (ENSMMDG00005003458) fam91a1 (ENSMMDG00005003443) klhl38a (ENSMMDG00005003438) spire1a (ENSMMDG00005003386) ENSMMDG00005003367 Cod MODERN SPECIES 14 ENSGMOG00000016995 mrpl3 (ENSGMOG00000017025) cspg5b (ENSGMOG00000029877) ENSGMOG00000017055 ENSGMOG00000030835 KLHL7 (ENSGMOG00000017140) HYCC1 (ENSGMOG00000017173) TOMM7 (ENSGMOG00000031331) ENSGMOG00000032131 ENSGMOG00000028765 RAPGEF5 (ENSGMOG00000006739) ENSGMOG00000032392 ENSGMOG00000032098 ENSGMOG00000003522 ENSGMOG00000003542 ENSGMOG00000003554 #22 ENSGMOG00000003577 #20 ENSGMOG00000022164 ENSGMOG00000002823 ENSGMOG00000002868 otud6b (ENSGMOG00000002883) ENSGMOG00000002904 runx1t1 (ENSGMOG00000002931) triqk (ENSGMOG00000031842) ENSGMOG00000035498 cibar1 (ENSGMOG00000004412) ENSGMOG00000029694 ENSGMOG00000036896 lratd2a (ENSGMOG00000004433) fam91a1 (ENSGMOG00000004452) ENSGMOG00000022404 Osteoglossiformes ANCESTRAL SPECIES 9 ENSGT01030000234534.B.a.a.b.c ENSGT00940000159412.f ENSGT00760000119652 ENSGT00390000005869.a ENSGT00730000111185.db.b ENSGT00940000159172.i ENSGT00940000160276.k ENSGT00870000136537 ENSGT00950000182940.b.a.b.a.b ENSGT00940000165753.a ENSGT00390000008158.b.b.a.a.q.a ENSGT00390000010118.c.b ENSGT00940000165143.a.b ENSGT00390000008158.b.a.t ENSGT00390000008158.b.b.a.a.r ENSGT00940000155620.q #22 ENSGT00940000158230.b.b #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b.h #18 ENSGT00940000155333.B.b ENSGT00390000007227.a ENSGT00940000159463.l #7 ENSGT00950000182844.b.b.a.c #8 ENSGT00940000157343.a.a ENSGT00390000014542 ENSGT00940000157485 ENSGT00390000009042 ENSGT00390000008281 ENSGT00940000165314.b ENSGT00940000154996.a.a.b P. kingsleyae MODERN SPECIES 256 ENSPKIG00000020524 LIX1L (ENSPKIG00000020538) rbm8a (ENSPKIG00000020558) otud7b (ENSPKIG00000020586) ENSPKIG00000020616 mtmr11 (ENSPKIG00000020642) sf3b4 (ENSPKIG00000020669) SV2A (ENSPKIG00000020700) nr2f5 (ENSPKIG00000020746) ENSPKIG00000020762 si:dkey-266f7.9 (ENSPKIG00000020772) ENSPKIG00000020790 ENSPKIG00000020802 ENSPKIG00000020809 rpz4 (ENSPKIG00000020827) UBQLN4 (ENSPKIG00000020843) #22 rab25a (ENSPKIG00000020869) #20 rab11al (ENSPKIG00000020893) ENSPKIG00000020911 LMNA (ENSPKIG00000020936) #18 ENSPKIG00000021015 naxe (ENSPKIG00000021115) ENSPKIG00000021128 #7 rhbg (ENSPKIG00000021145) #8 ENSPKIG00000021193 mrpl24 (ENSPKIG00000021226) HDGF (ENSPKIG00000021241) prcc (ENSPKIG00000021265) ENSPKIG00000021296 mrpl9 (ENSPKIG00000021327) si:ch211-113g11.6 (ENSPKIG00000021361) Asian bonytongue MODERN SPECIES 15 ntrk1 (ENSSFOG00015009061) afp4 (ENSSFOG00015009052) LIX1L (ENSSFOG00015024550) rbm8a (ENSSFOG00015009007) otud7b (ENSSFOG00015008954) mtmr11 (ENSSFOG00015008876) sf3b4 (ENSSFOG00015008864) SV2A (ENSSFOG00015008824) ENSSFOG00015029765 nr2f5 (ENSSFOG00015027367) ENSSFOG00015008770 si:dkey-266f7.9 (ENSSFOG00015033274) ENSSFOG00015008740 ENSSFOG00015008733 rpz4 (ENSSFOG00015008728) UBQLN4 (ENSSFOG00015008691) #22 rab25a (ENSSFOG00015028188) #20 rab11al (ENSSFOG00015028707) ENSSFOG00015030773 LMNA (ENSSFOG00015008546) #18 ENSSFOG00015008507 APOA1BP (ENSSFOG00015008464) ENSSFOG00015008427 mef2d (ENSSFOG00015008372) #7 rhbg (ENSSFOG00015008244) #8 ENSSFOG00015008192 mrpl24 (ENSSFOG00015008161) HDGF (ENSSFOG00015029454) prcc (ENSSFOG00015008087) ENSSFOG00015008049 ENSSFOG00015007739 Actinopterygii ANCESTRAL SPECIES 130 ENSGT00950000182971.B.b ENSGT00950000182870.a.a.b ENSGT00390000002996 ENSGT00390000009464 ENSGT00530000063335.B.a.a ENSGT00940000160917 #37 ENSGT00940000157619 ENSGT01060000248708 ENSGT00940000161506 ENSGT00390000008859.b.c #34 ENSGT00940000154743.A.b ENSGT00900000141074 ENSGT00900000141033.b.b #33 ENSGT00940000156698 #32 ENSGT00390000015248 #31 ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230 #20 ENSGT00940000165149 ENSGT00940000166523 Neopterygii ANCESTRAL SPECIES 155 ENSGT00940000159412 ENSGT00760000119652 ENSGT00390000005869.a ENSGT00730000111185 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230 #20 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00390000010652.A.b ENSGT00940000160472 ENSGT00940000162656 #15 ENSGT00940000164559.B ENSGT01050000244841.A.a.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00390000004097.b Osteoglossocephalai ANCESTRAL SPECIES 27 ENSGT00940000159172 ENSGT00940000160276 ENSGT00870000136537 ENSGT00950000182940.b.a.b.a.b ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00390000010118.c.b ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Clupeocephala ANCESTRAL SPECIES 27 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00390000010118.c.b ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT01010000223409 ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Euteleosteomorpha ANCESTRAL SPECIES 13 ENSGT00940000159412 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000169377 ENSGT00940000159463.n.a #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Protacanthopterygii ANCESTRAL SPECIES 12 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000163828.a.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT01010000223409 ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000169377 ENSGT00940000159463.n.a #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 45 ENSGT00510000048165.f ENSGT00940000165753.c ENSGT00940000163828.a.b.b.e ENSGT00940000165143.a.b.o ENSGT00390000008158.b.b.a.b.j ENSGT00390000008158.b.a.p.a ENSGT00390000008158.b.b.a.a.m.b.a ENSGT00940000165143.a.a.r ENSGT00390000008158.b.b.a.a.m.b.b ENSGT00940000165143.a.b.p.a.b ENSGT00390000008158.b.a.p.b ENSGT00390000008158.b.b.a.b.i.a ENSGT00390000008158.b.a.o.b ENSGT00390000008158.b.b.a.a.m.a ENSGT00510000051675.j ENSGT00940000155620.r.a #22 ENSGT00390000006100.q #21 ENSGT00940000158230.b.a.c #20 ENSGT00940000165149.a.b.a ENSGT00940000166523.h ENSGT00940000157244.a.b.f #18 ENSGT00940000155333.B.c ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.d.b ENSGT00940000169377.a ENSGT00940000159463.n.a.a #7 ENSGT00950000182844.b.b.a.g #8 ENSGT00940000161384.f ENSGT00940000157343.a.b.e ENSGT00940000159724.r ENSGT01060000250898 Salmoninae_a ANCESTRAL SPECIES 43 ENSGT00940000159172.g ENSGT00940000160276.h ENSGT00950000182940.b.a.b.a.a.c ENSGT00510000048165.f ENSGT00940000165753.c ENSGT00940000163828.a.b.b.e ENSGT00390000008158.b.b.a.a.m.b.a ENSGT00940000165143.a.a.r ENSGT00390000008158.b.b.a.a.m.b.b ENSGT00940000165143.a.b.p.a.b ENSGT00390000008158.b.a.p.b ENSGT00390000008158.b.b.a.b.i.a ENSGT00390000008158.b.a.o.b ENSGT00390000008158.b.b.a.a.m.a ENSGT00510000051675.j ENSGT00940000155620.r.a #22 ENSGT00390000006100.q #21 ENSGT00940000158230.b.a.c #20 ENSGT00940000165149.a.b.a ENSGT00940000166523.h ENSGT00940000157244.a.b.f #18 ENSGT00940000155333.B.c ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.d.b ENSGT00940000169377.a ENSGT00940000159463.n.a.a #7 ENSGT00950000182844.b.b.a.g #8 ENSGT00940000161384.f ENSGT00940000157343.a.b.e ENSGT00940000159724.r ENSGT00940000160475.v Salmo ANCESTRAL SPECIES 32 ENSGT00940000165753.c ENSGT00940000163828.a.b.b.e ENSGT00940000165143.a.a.q.c ENSGT00390000008158.b.a.p.a ENSGT00940000165143.a.b.o ENSGT00390000008158.b.b.a.b.j ENSGT00390000008158.b.b.a.a.m.b.a ENSGT00940000165143.a.a.r ENSGT00390000008158.b.b.a.a.m.b.b ENSGT00940000165143.a.b.p.a.b ENSGT00390000008158.b.a.p.b ENSGT00390000008158.b.b.a.b.i.a ENSGT00390000008158.b.a.o.b ENSGT00390000008158.b.b.a.a.m.a ENSGT00510000051675.j ENSGT00940000155620.r.a #22 ENSGT00390000006100.q #21 ENSGT00940000158230.b.a.c #20 ENSGT00940000165149.a.b.a ENSGT00940000166523.h ENSGT00940000157244.a.b.f #18 ENSGT00940000155333.B.c ENSGT00390000008765.m ENSGT01030000234575.c.a.a.a.a.a.b.b.d.b ENSGT00940000169377.a ENSGT00940000159463.n.a.a #7 ENSGT00950000182844.b.b.a.g #8 ENSGT00940000161384.f ENSGT00940000157343.a.b.e ENSGT00940000159724.r ENSGT00940000160475.v Atlantic salmon MODERN SPECIES 11 ENSSSAG00000072959 otud7b (ENSSSAG00000007068) mtmr11 (ENSSSAG00000072926) SV2A (ENSSSAG00000007246) bola1 (ENSSSAG00000072872) nr2f5 (ENSSSAG00000097502) ENSSSAG00000072865 ENSSSAG00000072861 ENSSSAG00000072860 rpz5 (ENSSSAG00000103736) ENSSSAG00000072290 rpz5 (ENSSSAG00000072286) ENSSSAG00000072283 ENSSSAG00000093440 rpz4 (ENSSSAG00000081899) ubqln4 (ENSSSAG00000072235) #22 rab25b (ENSSSAG00000072230) #20 rab11al (ENSSSAG00000117570) ENSSSAG00000091396 LMNA (ENSSSAG00000072180) #18 ENSSSAG00000072161 gpatch4 (ENSSSAG00000072155) ENSSSAG00000072153 ENSSSAG00000072152 ENSSSAG00000108997 mef2d (ENSSSAG00000071885) #7 rhbg (ENSSSAG00000071118) #8 hapln2 (ENSSSAG00000010202) bcan (ENSSSAG00000071059) isg20l2 (ENSSSAG00000071047) s100a1 (ENSSSAG00000071037) River trout MODERN SPECIES 30 mtmr11 (ENSSTUG00000038901) SV2A (ENSSTUG00000038754) bola1 (ENSSTUG00000038739) nr2f5 (ENSSTUG00000038732) ENSSTUG00000038687 rpz (ENSSTUG00000038673) rpz5 (ENSSTUG00000038663) ENSSTUG00000038661 rpz4 (ENSSTUG00000038619) rpz (ENSSTUG00000038608) rpz4 (ENSSTUG00000038603) rpz5 (ENSSTUG00000038579) rpz5 (ENSSTUG00000038575) rpz4 (ENSSTUG00000038571) ENSSTUG00000038569 ubqln4 (ENSSTUG00000038433) #22 lamtor2 (ENSSTUG00000038406) #21 rab25b (ENSSTUG00000038376) #20 rab11al (ENSSTUG00000048664) ENSSTUG00000048661 lmna (ENSSTUG00000048655) #18 ENSSTUG00000048635 gpatch4 (ENSSTUG00000048633) ENSSTUG00000048630 ENSSTUG00000048626 mef2d (ENSSTUG00000048594) #7 ENSSTUG00000048585 rhbg (ENSSTUG00000048552) #8 ENSSTUG00000048545 hapln2 (ENSSTUG00000048534) bcan (ENSSTUG00000048524) Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00940000154566.e #12 ENSGT00940000160567.s #13 ENSGT00940000159412.c ENSGT00760000119652.e.b ENSGT00730000111185.eb.c ENSGT00940000159172.g ENSGT00940000160276.h ENSGT00950000182940.b.a.b.a.a.c ENSGT00510000048165.f ENSGT00940000165753.c ENSGT00940000163828.a.b.b.e ENSGT00390000008158.b.a.p.b ENSGT00390000008158.b.a.o.b ENSGT00390000008158.b.b.a.a.m.a ENSGT00510000051675.j ENSGT00940000155620.r.a #22 ENSGT00390000006100.q #21 ENSGT00940000158230.b.a.c #20 ENSGT00940000165149.a.a ENSGT00940000166523.h ENSGT00940000157244.a.b.f #18 ENSGT00940000155333.B.c ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.d.b ENSGT00940000169377.a ENSGT00940000159463.n.a.a #7 ENSGT00950000182844.b.b.a.g #8 ENSGT00940000161384.f ENSGT00940000157343.a.b.e ENSGT00940000159724.r ENSGT00940000160475.v Oncorhynchus_a ANCESTRAL SPECIES 39 ENSGT00940000158438.n.e ENSGT00940000154566.e #12 ENSGT00940000160567.s #13 ENSGT00940000159412.c ENSGT00760000119652.e.b ENSGT00730000111185.eb.c ENSGT00940000159172.g ENSGT00940000160276.h ENSGT00950000182940.b.a.b.a.a.c ENSGT00510000048165.f ENSGT00940000165753.c ENSGT00940000163828.a.b.b.e ENSGT00390000008158.b.a.o.b ENSGT00390000008158.b.b.a.a.m.a ENSGT00510000051675.j ENSGT00940000155620.r.a #22 ENSGT00390000006100.q #21 ENSGT00940000158230.b.a.c #20 ENSGT00940000165149.a.a ENSGT00940000166523.h ENSGT00940000157244.a.b.f #18 ENSGT00940000155333.B.c ENSGT00390000008765 ENSGT01100000263776 ENSGT00940000169377.a ENSGT00940000159463.n.a.a #7 ENSGT00950000182844.b.b.a.g #8 ENSGT00940000161384.f ENSGT00940000157343.a.b.e ENSGT00940000159724.r ENSGT00940000160475.v Coho salmon MODERN SPECIES 11 SYNGAP1 (ENSOKIG00005024218) smg5 (ENSOKIG00005024109) #12 PAQR6 (ENSOKIG00005024083) #13 ntrk1 (ENSOKIG00005024065) ENSOKIG00005024041 rbm8a (ENSOKIG00005024006) otud7b (ENSOKIG00005023961) mtmr11 (ENSOKIG00005023835) SV2A (ENSOKIG00005023756) ENSOKIG00005023731 nr2f5 (ENSOKIG00005023713) ENSOKIG00005023704 rpz5 (ENSOKIG00005023668) rpz4 (ENSOKIG00005023664) ENSOKIG00005023658 ubqln4 (ENSOKIG00005023638) #22 lamtor2 (ENSOKIG00005023629) #21 rab25b (ENSOKIG00005023603) #20 rab11al (ENSOKIG00005023587) ENSOKIG00005023573 lmna (ENSOKIG00005023461) #18 ENSOKIG00005023438 gpatch4 (ENSOKIG00005023436) ENSOKIG00005023417 ENSOKIG00005023408 mef2d (ENSOKIG00005022803) #7 rhbg (ENSOKIG00005022587) #8 hapln2 (ENSOKIG00005022561) bcan (ENSOKIG00005022519) ENSOKIG00005022485 s100a1 (ENSOKIG00005022371) Chinook salmon MODERN SPECIES 22 SYNGAP1 (ENSOTSG00005007737) smg5 (ENSOTSG00005007486) #12 PAQR6 (ENSOTSG00005007482) #13 ntrk1 (ENSOTSG00005007479) ENSOTSG00005007475 rbm8a (ENSOTSG00005007474) otud7b (ENSOTSG00005007467) mtmr11 (ENSOTSG00005007464) SV2A (ENSOTSG00005007461) bola1 (ENSOTSG00005007451) nr2f5 (ENSOTSG00005007449) ENSOTSG00005007448 rpz5 (ENSOTSG00005007437) rpz4 (ENSOTSG00005007436) ENSOTSG00005007435 ubqln4 (ENSOTSG00005007285) #22 lamtor2 (ENSOTSG00005007283) #21 rab25b (ENSOTSG00005007282) #20 rab11al (ENSOTSG00005007281) ENSOTSG00005007279 lmna (ENSOTSG00005007274) #18 ENSOTSG00005007264 gpatch4 (ENSOTSG00005007261) ENSOTSG00005007260 ENSOTSG00005007259 mef2d (ENSOTSG00005007247) #7 rhbg (ENSOTSG00005007243) #8 hapln2 (ENSOTSG00005007242) bcan (ENSOTSG00005007240) ENSOTSG00005007239 ENSOTSG00005007238 Rainbow trout MODERN SPECIES 21 ENSOMYG00000004956 rbm8a (ENSOMYG00000004925) otud7b (ENSOMYG00000004904) mtmr11 (ENSOMYG00000004861) SV2A (ENSOMYG00000004803) bola1 (ENSOMYG00000069669) nr2f5 (ENSOMYG00000004772) ENSOMYG00000004744 rpz5 (ENSOMYG00000074204) ENSOMYG00000071196 rpz5 (ENSOMYG00000051983) ENSOMYG00000004495 rpz5 (ENSOMYG00000004462) ENSOMYG00000056361 ENSOMYG00000004411 ubqln4 (ENSOMYG00000004399) #22 mapip (ENSOMYG00000004275) #21 rab25b (ENSOMYG00000004235) #20 rab11al (ENSOMYG00000004208) ENSOMYG00000004104 LMNA (ENSOMYG00000003999) #18 ENSOMYG00000012115 gpatch4 (ENSOMYG00000012087) ENSOMYG00000058094 ENSOMYG00000075763 mef2d (ENSOMYG00000012051) #7 rhgb (ENSOMYG00000011958) #8 ENSOMYG00000008765 hapln2 (ENSOMYG00000011931) ENSOMYG00000059370 bcan (ENSOMYG00000011889) Huchen MODERN SPECIES 47 rpz (ENSHHUG00000018680) rpz4 (ENSHHUG00000018676) ENSHHUG00000018665 rpz5 (ENSHHUG00000018662) rpz4 (ENSHHUG00000018657) ENSHHUG00000018645 ENSHHUG00000018642 ubqln4 (ENSHHUG00000018630) #22 lamtor2 (ENSHHUG00000018590) #21 rab25b (ENSHHUG00000018572) #20 rab11al (ENSHHUG00000018430) ENSHHUG00000018426 lmna (ENSHHUG00000018377) #18 ENSHHUG00000018347 gpatch4 (ENSHHUG00000018339) ENSHHUG00000018334 ENSHHUG00000018329 mef2d (ENSHHUG00000018194) #7 rhbg (ENSHHUG00000018089) #8 hapln2 (ENSHHUG00000018086) ENSHHUG00000018073 ENSHHUG00000018056 ENSHHUG00000018039 Salmoninae ANCESTRAL SPECIES 27 ENSGT00730000111185.eb.d ENSGT00940000159172.h ENSGT00940000160276.g ENSGT00950000182940.b.a.b.a.a.d ENSGT00510000048165.e ENSGT00940000165753.d ENSGT00940000163828.a.b.b.f ENSGT00940000165143.a.b.p.a.a ENSGT00940000165143.a.a.q ENSGT00390000008158.b.b.a.b.i.b ENSGT00390000008158.b.a.o.a ENSGT00390000008158.b.b.a.a.n ENSGT01010000223409 ENSGT00510000051675.i ENSGT00390000010118.c.a.a ENSGT00940000155620.r.b #22 ENSGT00390000006100.r #21 ENSGT00940000158230.b.a.d #20 ENSGT00940000165149.a.b.b ENSGT00940000166523.g ENSGT00940000157244.a.b.e #18 ENSGT00940000155333.B.d ENSGT01030000234575.c.a.a.a.a.a.b.b.c ENSGT01030000234575.c.a.a.a.a.a.b.b.d.a ENSGT00940000169377.b ENSGT00940000159463.n.a.b #7 ENSGT00950000182844.b.b.a.h #8 ENSGT00940000161384.e ENSGT00940000157343.a.b.f ENSGT00940000159724.q ENSGT00530000063745.a Salmoninae_a ANCESTRAL SPECIES 39 ENSGT00730000111185.eb.d ENSGT00940000159172.h ENSGT00940000160276.g ENSGT00950000182940.b.a.b.a.a.d ENSGT00510000048165.e ENSGT00940000165753.d ENSGT00940000163828.a.b.b.f ENSGT00940000165143.a.b.p.a.a ENSGT00940000165143.a.a.q ENSGT00390000008158.b.b.a.b.i.b ENSGT00390000008158.b.a.o.a ENSGT00390000008158.b.b.a.a.n ENSGT01010000223409 ENSGT00510000051675.i ENSGT00390000010118.c.a.a ENSGT00940000155620.r.b #22 ENSGT00390000006100.r #21 ENSGT00940000158230.b.a.d #20 ENSGT00940000165149.a.b.b ENSGT00940000166523.g ENSGT00940000157244.a.b.e #18 ENSGT00940000155333.B.d ENSGT01030000234575.c.a.a.a.a.a.b.b.c ENSGT01030000234575.c.a.a.a.a.a.b.b.d.a ENSGT00940000169377.b ENSGT00940000159463.n.a.b #7 ENSGT00950000182844.b.b.a.h #8 ENSGT00940000161384.e ENSGT00940000157343.a.b.f ENSGT00940000159724.q ENSGT00530000063745.a Salmo ANCESTRAL SPECIES 1 ENSGT00760000119652.e.a ENSGT00730000111185.eb.d ENSGT00940000159172.h ENSGT00940000160276.g ENSGT00950000182940.b.a.b.a.a.d ENSGT00510000048165.e ENSGT00940000165753.d ENSGT00940000163828.a.b.b.f ENSGT00940000165143.a.b.p.a.a ENSGT00940000165143.a.a.q.d ENSGT00390000008158.b.b.a.b.i.b.b ENSGT00390000008158.b.a.o.a ENSGT00390000008158.b.b.a.a.n ENSGT00510000051675.i ENSGT00390000010118.c.a.a ENSGT00940000155620.r.b #22 ENSGT00390000006100.r #21 ENSGT00940000158230.b.a.d #20 ENSGT00940000165149.a.b.b ENSGT00940000166523.g ENSGT00940000157244.a.b.e #18 ENSGT00940000155333.B.d ENSGT00390000008765.l ENSGT01030000234575.c.a.a.a.a.a.b.b.c ENSGT01030000234575.c.a.a.a.a.a.b.b.d.a ENSGT00940000169377.b ENSGT00940000159463.n.a.b #7 ENSGT00950000182844.b.b.a.h #8 ENSGT00940000161384.e ENSGT00940000157343.a.b.f ENSGT00940000159724.q Atlantic salmon MODERN SPECIES 24 ENSSSAG00000008165 rpz (ENSSSAG00000091955) ENSSSAG00000072291 ENSSSAG00000116173 ENSSSAG00000008179 rpz5 (ENSSSAG00000121454) ENSSSAG00000121934 rpz4 (ENSSSAG00000092151) ENSSSAG00000008196 ENSSSAG00000120565 M4A8A (ENSSSAG00000010511) ENSSSAG00000118258 ENSSSAG00000119551 m4a8a (ENSSSAG00000060046) ENSSSAG00000089912 ubqln4 (ENSSSAG00000096486) #22 lamtor2 (ENSSSAG00000008231) #21 rab25b (ENSSSAG00000008244) #20 rab11al (ENSSSAG00000008269) ENSSSAG00000008307 ENSSSAG00000009866 LMNA (ENSSSAG00000008349) #18 ENSSSAG00000110312 ENSSSAG00000009893 ENSSSAG00000009900 ENSSSAG00000094384 mef2d (ENSSSAG00000009931) #7 rhbg (ENSSSAG00000009992) #8 hapln2 (ENSSSAG00000071090) bcan (ENSSSAG00000010213) ISG20L2 (ENSSSAG00000010247) River trout MODERN SPECIES 22 ntrk1 (ENSSTUG00000037432) ENSSTUG00000037480 rbm8a (ENSSTUG00000037492) ENSSTUG00000037511 otud7b (ENSSTUG00000037519) mtmr11 (ENSSTUG00000037559) SV2A (ENSSTUG00000037605) bola1 (ENSSTUG00000038021) nr2f5 (ENSSTUG00000038025) ENSSTUG00000038041 rpz (ENSSTUG00000038080) rpz6 (ENSSTUG00000038082) rpz5 (ENSSTUG00000038084) ENSSTUG00000038103 zgc:174938 (ENSSTUG00000038170) ubqln4 (ENSSTUG00000038189) #22 lamtor2 (ENSSTUG00000038524) #21 rab25b (ENSSTUG00000038546) #20 rab11al (ENSSTUG00000038614) ENSSTUG00000038657 lmna (ENSSTUG00000038669) #18 ENSSTUG00000038776 gpatch4 (ENSSTUG00000038813) ENSSTUG00000038824 ENSSTUG00000038827 ENSSTUG00000038838 mef2d (ENSSTUG00000038857) #7 rhbg (ENSSTUG00000039002) #8 hapln2 (ENSSTUG00000039038) bcan (ENSSTUG00000039054) ISG20L2 (ENSSTUG00000039091) Oncorhynchus ANCESTRAL SPECIES 38 ENSGT00760000119652.e.a ENSGT00730000111185.eb.d ENSGT00940000159172.h ENSGT00940000160276.g ENSGT00950000182940.b.a.b.a.a.d ENSGT00510000048165.e ENSGT00940000165753.d ENSGT00940000163828.a.b.b.f ENSGT00940000165143.a.b.p.a.a ENSGT00940000165143.a.a.q ENSGT00390000008158.b.b.a.b.i.b ENSGT00390000008158.b.a.o.a ENSGT00390000008158.b.b.a.a.n ENSGT00510000051675.i.f ENSGT00390000010118.c.a.a ENSGT00940000155620.r.b #22 ENSGT00390000006100.r #21 ENSGT00940000158230.b.a.d #20 ENSGT00940000165149.a.b.b ENSGT00940000166523.g ENSGT00940000157244.a.b.e #18 ENSGT00940000155333.B.d ENSGT01030000234575.c.a.a.a.a.a.b.b.c ENSGT01030000234575.c.a.a.a.a.a.b.b.d.a ENSGT00940000169377.b ENSGT00940000159463.n.a.b #7 ENSGT00950000182844.b.b.a.h #8 ENSGT00940000161384.e ENSGT00940000157343.a.b.f ENSGT00940000159724.q ENSGT00530000063745.a Rainbow trout MODERN SPECIES 11 otud7b (ENSOMYG00000001215) mtmr11 (ENSOMYG00000001182) SV2A (ENSOMYG00000001165) bola1 (ENSOMYG00000001141) nr2f5 (ENSOMYG00000001131) ENSOMYG00000001121 ENSOMYG00000001086 rpz (ENSOMYG00000077708) rpz6 (ENSOMYG00000001075) ENSOMYG00000069366 rpz5 (ENSOMYG00000001071) rpz4 (ENSOMYG00000001065) ENSOMYG00000057262 zgc:174938 (ENSOMYG00000000981) ENSOMYG00000049461 ubqln4 (ENSOMYG00000000958) #22 lamtor2 (ENSOMYG00000000922) #21 rab25b (ENSOMYG00000000916) #20 rab11al (ENSOMYG00000000878) ENSOMYG00000000827 LMNA (ENSOMYG00000000818) #18 ENSOMYG00000000754 ENSOMYG00000061602 ENSOMYG00000000628 ENSOMYG00000000615 mef2d (ENSOMYG00000000599) #7 ENSOMYG00000051267 rhbg2a (ENSOMYG00000000559) #8 hapln2 (ENSOMYG00000000450) ENSOMYG00000050334 bcan (ENSOMYG00000000429) Oncorhynchus_a ANCESTRAL SPECIES 26 ENSGT00940000160276.g ENSGT00950000182940.b.a.b.a.a.d ENSGT00510000048165.e ENSGT00940000165753.d ENSGT00940000163828.a.b.b.f ENSGT00940000165143.a.b.p.a.a ENSGT00940000165143.a.a.q ENSGT00390000008158.b.b.a.b.i.b ENSGT00390000008158.b.a.o.a ENSGT00390000008158.b.b.a.a.n ENSGT01010000223409 ENSGT00510000051675.i.e ENSGT01000000219592 ENSGT00390000010118.c.a.a ENSGT00510000051675.i.f ENSGT00940000155620.r.b #22 ENSGT00390000006100.r #21 ENSGT00940000158230.b.a.d #20 ENSGT00940000165149.a.b.b ENSGT00940000166523.g ENSGT00940000157244.a.b.e #18 ENSGT00940000155333.B.d ENSGT01030000234575.c.a.a.a.a.a.b.b.c ENSGT01030000234575.c.a.a.a.a.a.b.b.d.a ENSGT00940000169377.b ENSGT00940000159463.n.a.b #7 ENSGT00950000182844.b.b.a.h #8 ENSGT00940000161384.e ENSGT00940000157343.a.b.f ENSGT00940000159724.q ENSGT00530000063745.a Chinook salmon MODERN SPECIES 15 otud7b (ENSOTSG00005016074) mtmr11 (ENSOTSG00005016072) bola1 (ENSOTSG00005016067) nr2f5 (ENSOTSG00005016066) ENSOTSG00005016032 ENSOTSG00005016214 rpz (ENSOTSG00005016213) ENSOTSG00005016211 ENSOTSG00005016210 ENSOTSG00005016209 rpz5 (ENSOTSG00005016208) rpz4 (ENSOTSG00005016207) ENSOTSG00005016206 ENSOTSG00005016205 ENSOTSG00005016204 ubqln4 (ENSOTSG00005016076) #22 lamtor2 (ENSOTSG00005016073) #21 rab25b (ENSOTSG00005016070) #20 ENSOTSG00005016068 ENSOTSG00005016065 lmna (ENSOTSG00005015898) #18 ENSOTSG00005015895 ENSOTSG00005015894 ENSOTSG00005015893 ENSOTSG00005015892 mef2d (ENSOTSG00005015866) #7 rhbg (ENSOTSG00005015808) #8 hapln2 (ENSOTSG00005015807) bcan (ENSOTSG00005015805) ENSOTSG00005015803 mettl25b (ENSOTSG00005015802) Coho salmon MODERN SPECIES 4 otud7b (ENSOKIG00005028941) mtmr11 (ENSOKIG00005028972) SV2A (ENSOKIG00005029023) bola1 (ENSOKIG00005029249) nr2f5 (ENSOKIG00005029260) ENSOKIG00005020393 ENSOKIG00005020405 rpz (ENSOKIG00005020414) rpz6 (ENSOKIG00005020418) rpz5 (ENSOKIG00005020423) rpz4 (ENSOKIG00005020427) ENSOKIG00005020432 ENSOKIG00005020447 zgc:174938 (ENSOKIG00005020454) ENSOKIG00005020464 ubqln4 (ENSOKIG00005020486) #22 lamtor2 (ENSOKIG00005020878) #21 rab25b (ENSOKIG00005020905) #20 rab11al (ENSOKIG00005020937) ENSOKIG00005021034 LMNA (ENSOKIG00005021075) #18 ENSOKIG00005021172 ENSOKIG00005021202 ENSOKIG00005021215 ENSOKIG00005021230 mef2d (ENSOKIG00005021265) #7 ENSOKIG00005021339 rhbg (ENSOKIG00005021364) #8 hapln2 (ENSOKIG00005021474) bcan (ENSOKIG00005021491) ISG20L2 (ENSOKIG00005021512) Huchen MODERN SPECIES 208 ENSHHUG00000042114 rpz5 (ENSHHUG00000042117) rpz4 (ENSHHUG00000042118) ENSHHUG00000042119 zgc:174938 (ENSHHUG00000042151) ubqln4 (ENSHHUG00000042159) #22 lamtor2 (ENSHHUG00000042170) #21 rab25b (ENSHHUG00000042194) #20 rab11al (ENSHHUG00000042219) ENSHHUG00000042257 lmna (ENSHHUG00000042268) #18 ENSHHUG00000042292 ENSHHUG00000042395 ENSHHUG00000042410 ENSHHUG00000042431 mef2d (ENSHHUG00000042439) #7 rhbg (ENSHHUG00000042527) #8 hapln2 (ENSHHUG00000042670) bcan (ENSHHUG00000042677) ISG20L2 (ENSHHUG00000042688) mettl25b (ENSHHUG00000042694) Northern pike MODERN SPECIES 19 rbm8a (ENSELUG00000033507) otud7b (ENSELUG00000000461) mtmr11 (ENSELUG00000012368) ENSELUG00000012315 SV2A (ENSELUG00000001522) bola1 (ENSELUG00000012263) nr2f5 (ENSELUG00000012245) ENSELUG00000012232 ENSELUG00000027498 rpz (ENSELUG00000000452) rpz6 (ENSELUG00000012205) rpz5 (ENSELUG00000012198) rpz5 (ENSELUG00000012177) rpz4 (ENSELUG00000012173) tmem176l.2 (ENSELUG00000012170) ubqln4 (ENSELUG00000012144) #22 lamtor2 (ENSELUG00000012106) #21 rab25b (ENSELUG00000012060) #20 rab11al (ENSELUG00000012035) ENSELUG00000012012 lmna (ENSELUG00000011994) #18 ENSELUG00000011947 gpatch4 (ENSELUG00000034114) ENSELUG00000011875 ENSELUG00000033555 ENSELUG00000026589 ENSELUG00000029443 ENSELUG00000011842 mef2d (ENSELUG00000011795) #7 rhbg (ENSELUG00000011736) #8 hapln2 (ENSELUG00000011692) Acanthomorphata ANCESTRAL SPECIES 34 ENSGT00950000183180.a.b ENSGT00940000158438.n ENSGT00940000154566 #12 ENSGT00940000160567 #13 ENSGT00940000159412 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.a Euacanthomorphacea ANCESTRAL SPECIES ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181991 ENSGT00550000075030 ENSGT00940000169242 ENSGT00990000205959 ENSGT01060000248544.a.b.b.a Percomorphaceae ANCESTRAL SPECIES ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181991 ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181991 ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT01100000263776 ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181991 ENSGT00550000075030 ENSGT00940000169242 Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT01100000263776 ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181991 ENSGT00550000075030 ENSGT00940000169242 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT01100000263776 ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181991 ENSGT00550000075030 ENSGT00940000169242 Ballan wrasse MODERN SPECIES 219 dhx16 (ENSLBEG00000017249) rnf183 (ENSLBEG00000017224) mgat1a (ENSLBEG00000017206) sh3bp5la (ENSLBEG00000017195) ENSLBEG00000017182 GABBR1 (ENSLBEG00000017055) tnfb (ENSLBEG00000016956) ENSLBEG00000016944 glrx3 (ENSLBEG00000016920) ENSLBEG00000016899 bag6 (ENSLBEG00000016665) tspan13a (ENSLBEG00000016592) ENSLBEG00000016567 ENSLBEG00000016540 ENSLBEG00000016514 ubqln4 (ENSLBEG00000016483) #22 lamtor2 (ENSLBEG00000016466) #21 rab25b (ENSLBEG00000016446) #20 rab11al (ENSLBEG00000016417) ENSLBEG00000016402 lmna (ENSLBEG00000016348) #18 ENSLBEG00000016316 gpatch4 (ENSLBEG00000016296) ENSLBEG00000016277 ENSLBEG00000016253 ENSLBEG00000016237 ENSLBEG00000016222 ENSLBEG00000016203 ENSLBEG00000016182 rpz4 (ENSLBEG00000016167) rpz5 (ENSLBEG00000016154) Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Perciformes ANCESTRAL SPECIES 3 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Cottioidei ANCESTRAL SPECIES 7 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000170682 ENSGT00940000167095.B ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01100000263776 ENSGT00940000157010.m ENSGT00390000016199.a ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b Lumpfish MODERN SPECIES 17 otud7b (ENSCLMG00005019077) mtmr11 (ENSCLMG00005019078) SV2A (ENSCLMG00005019080) bola1 (ENSCLMG00005019432) nr2f5 (ENSCLMG00005019433) ENSCLMG00005019434 ENSCLMG00005019435 rpz (ENSCLMG00005019437) rpz6 (ENSCLMG00005012078) rpz5 (ENSCLMG00005012079) rpz4 (ENSCLMG00005012081) rpz4 (ENSCLMG00005012082) rpz4 (ENSCLMG00005012083) tmem176l.4 (ENSCLMG00005012084) zgc:174938 (ENSCLMG00005012085) ubqln4 (ENSCLMG00005012086) #22 lamtor2 (ENSCLMG00005012087) #21 rab25b (ENSCLMG00005012088) #20 rab11al (ENSCLMG00005012089) ENSCLMG00005012129 lmna (ENSCLMG00005012130) #18 ENSCLMG00005012134 gpatch4 (ENSCLMG00005012325) ENSCLMG00005012326 tspan13a (ENSCLMG00005012327) bag6 (ENSCLMG00005012328) ENSCLMG00005012329 ENSCLMG00005012330 ENSCLMG00005012331 GABBR1 (ENSCLMG00005012336) sh3bp5la (ENSCLMG00005012425) Stickleback MODERN SPECIES 19 otud7b (ENSGACG00000013171) mtmr11 (ENSGACG00000013174) ENSGACG00000013179 SV2A (ENSGACG00000013181) bola1 (ENSGACG00000013188) nr2f5 (ENSGACG00000013191) ENSGACG00000013194 ENSGACG00000013202 ENSGACG00000013206 rpz (ENSGACG00000013209) rpz6 (ENSGACG00000013211) ENSGACG00000013214 rpz4 (ENSGACG00000013217) tmem176l.4 (ENSGACG00000013220) zgc:174938 (ENSGACG00000013227) ubqln4 (ENSGACG00000013230) #22 lamtor2 (ENSGACG00000013237) #21 rab25b (ENSGACG00000013249) #20 rab11al (ENSGACG00000013259) ENSGACG00000013282 lmna (ENSGACG00000013285) #18 ENSGACG00000013308 gpatch4 (ENSGACG00000013318) ENSGACG00000013326 ENSGACG00000013327 tspan13a (ENSGACG00000013330) bag6 (ENSGACG00000013337) tnfb (ENSGACG00000013372) GABBR1 (ENSGACG00000013381) sh3bp5la (ENSGACG00000013391) dnali1 (ENSGACG00000013396) Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000159412 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Channel bull blenny MODERN SPECIES 7 PAQR6 (ENSCGOG00000005522) #13 ntrk1 (ENSCGOG00000005507) rbm8a (ENSCGOG00000005468) otud7b (ENSCGOG00000005461) mtmr11 (ENSCGOG00000005452) SV2A (ENSCGOG00000005197) bola1 (ENSCGOG00000005186) nr2f5 (ENSCGOG00000005173) ENSCGOG00000005170 rpz (ENSCGOG00000005167) rpz6 (ENSCGOG00000005164) rpz5 (ENSCGOG00000005163) rpz4 (ENSCGOG00000005162) tmem176l.4 (ENSCGOG00000005158) zgc:174938 (ENSCGOG00000005156) ubqln4 (ENSCGOG00000005155) #22 lamtor2 (ENSCGOG00000005147) #21 rab25b (ENSCGOG00000005132) #20 rab11al (ENSCGOG00000005129) ENSCGOG00000005128 lmna (ENSCGOG00000004574) #18 gpatch4 (ENSCGOG00000004533) ENSCGOG00000004528 ENSCGOG00000004525 tspan13a (ENSCGOG00000004522) bag6 (ENSCGOG00000004255) glrx3 (ENSCGOG00000004243) ENSCGOG00000004238 tnfb (ENSCGOG00000004212) GABBR1 (ENSCGOG00000002486) sh3bp5la (ENSCGOG00000002327) Pike perch MODERN SPECIES 50 SV2A (ENSSLUG00000011794) bola1 (ENSSLUG00000011810) nr2f5 (ENSSLUG00000011814) ENSSLUG00000011820 rpz (ENSSLUG00000011824) rpz6 (ENSSLUG00000011826) rpz5 (ENSSLUG00000011829) rpz4 (ENSSLUG00000011830) ENSSLUG00000011831 ENSSLUG00000011833 ENSSLUG00000011835 ENSSLUG00000011840 ENSSLUG00000011848 ENSSLUG00000011884 ENSSLUG00000011887 ubqln4 (ENSSLUG00000011892) #22 lamtor2 (ENSSLUG00000011893) #21 rab25b (ENSSLUG00000011900) #20 rab11al (ENSSLUG00000011904) ENSSLUG00000011910 lmna (ENSSLUG00000011940) #18 ENSSLUG00000012071 ENSSLUG00000012081 gpatch4 (ENSSLUG00000012088) Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000159172 ENSGT00940000160276 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00990000204623 ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00940000160276 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000170682 ENSGT00940000167095.B ENSGT00940000163828.b.b.d ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g ENSGT00390000018500.a.d ENSGT00530000063632.B.b Large yellow croaker MODERN SPECIES 484 bola1 (ENSLCRG00005001335) nr2f5 (ENSLCRG00005001332) ENSLCRG00005001329 ENSLCRG00005001322 ENSLCRG00005001319 rpz (ENSLCRG00005001318) rpz6 (ENSLCRG00005001317) rpz5 (ENSLCRG00005001315) rpz4 (ENSLCRG00005001314) ENSLCRG00005001306 ENSLCRG00005001299 ENSLCRG00005001297 ENSLCRG00005001292 ENSLCRG00005001283 zgc:174938 (ENSLCRG00005001280) ENSLCRG00005001279 #22 lamtor2 (ENSLCRG00005001275) #21 rab25b (ENSLCRG00005001267) #20 ENSLCRG00005001266 rab11al (ENSLCRG00005001210) lmna (ENSLCRG00005001196) #18 ENSLCRG00005000883 gpatch4 (ENSLCRG00005000831) ENSLCRG00005000821 ENSLCRG00005000814 ENSLCRG00005000792 tspan13a (ENSLCRG00005000782) glrx3 (ENSLCRG00005000772) ENSLCRG00005000763 ENSLCRG00005000756 bag6 (ENSLCRG00005000687) European seabass MODERN SPECIES 6 afp4 (ENSDLAG00005009173) otud7b (ENSDLAG00005009187) mtmr11 (ENSDLAG00005009208) ENSDLAG00005031318 nr2f5 (ENSDLAG00005009248) ENSDLAG00005009259 ENSDLAG00005034002 ENSDLAG00005035037 rpz6 (ENSDLAG00005028300) rpz5 (ENSDLAG00005027375) rpz4 (ENSDLAG00005026708) ENSDLAG00005009289 ENSDLAG00005009296 ENSDLAG00005029399 zgc:174938 (ENSDLAG00005014746) ENSDLAG00005026442 #22 lamtor2 (ENSDLAG00005009320) #21 rab25b (ENSDLAG00005009338) #20 ENSDLAG00005033062 LMNA (ENSDLAG00005009437) #18 ENSDLAG00005009606 ENSDLAG00005035098 ENSDLAG00005009616 tspan13a (ENSDLAG00005009625) bag6 (ENSDLAG00005009642) ENSDLAG00005009690 ENSDLAG00005009704 ENSDLAG00005009718 tnfb (ENSDLAG00005009729) ENSDLAG00005000313 rnf183 (ENSDLAG00005000783) Gilthead seabream MODERN SPECIES 8 bola1 (ENSSAUG00010014072) nr2f5 (ENSSAUG00010014064) ENSSAUG00010014054 ENSSAUG00010014048 rpz (ENSSAUG00010014046) rpz6 (ENSSAUG00010014043) rpz5 (ENSSAUG00010014040) rpz4 (ENSSAUG00010014038) ENSSAUG00010014033 ENSSAUG00010014032 ENSSAUG00010013986 ENSSAUG00010013958 ENSSAUG00010013942 ENSSAUG00010013933 zgc:174938 (ENSSAUG00010013927) ENSSAUG00010013924 #22 lamtor2 (ENSSAUG00010013916) #21 rab25b (ENSSAUG00010013906) #20 rab11al (ENSSAUG00010013897) ENSSAUG00010013894 lmna (ENSSAUG00010013671) #18 ENSSAUG00010013666 gpatch4 (ENSSAUG00010013661) ENSSAUG00010013659 ENSSAUG00010013658 ENSSAUG00010013657 ENSSAUG00010013656 tspan13a (ENSSAUG00010013655) bag6 (ENSSAUG00010013653) glrx3 (ENSSAUG00010013651) ENSSAUG00010013650 Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT01100000263776 ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 Carangaria ANCESTRAL SPECIES 1 ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Carangaria_A ANCESTRAL SPECIES 27 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a ENSGT00940000157642.g Seriola ANCESTRAL SPECIES 76 ENSGT00650000094861 ENSGT00390000013670.f ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000170682 ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.h.b.a ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00940000181495 ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Greater amberjack MODERN SPECIES 44 rsad2 (ENSSDUG00000006029) SV2A (ENSSDUG00000006062) bola1 (ENSSDUG00000006093) bola1 (ENSSDUG00000006099) nr2f5 (ENSSDUG00000006112) ENSSDUG00000006116 ENSSDUG00000006124 rpz (ENSSDUG00000006138) rpz6 (ENSSDUG00000006147) rpz5 (ENSSDUG00000006159) rpz4 (ENSSDUG00000006166) ENSSDUG00000006170 ENSSDUG00000006180 ENSSDUG00000006200 zgc:174938 (ENSSDUG00000006207) ubqln4 (ENSSDUG00000006235) #22 lamtor2 (ENSSDUG00000006243) #21 rab25b (ENSSDUG00000006260) #20 rab11al (ENSSDUG00000006278) ENSSDUG00000006298 lmna (ENSSDUG00000006311) #18 ENSSDUG00000006373 gpatch4 (ENSSDUG00000006583) ENSSDUG00000006598 ENSSDUG00000006612 tspan13a (ENSSDUG00000006625) bag6 (ENSSDUG00000006651) ENSSDUG00000006707 glrx3 (ENSSDUG00000006716) ENSSDUG00000006728 ENSSDUG00000006743 Yellowtail amberjack MODERN SPECIES 2757 mtmr11 (ENSSLDG00000011741) ENSSLDG00000011800 rsad2 (ENSSLDG00000011814) SV2A (ENSSLDG00000011841) bola1 (ENSSLDG00000011888) nr2f5 (ENSSLDG00000011902) ENSSLDG00000011925 rpz (ENSSLDG00000011962) ENSSLDG00000011974 rpz5 (ENSSLDG00000011992) rpz4 (ENSSLDG00000011999) ENSSLDG00000012016 ENSSLDG00000012048 ENSSLDG00000012058 zgc:174938 (ENSSLDG00000012070) ubqln4 (ENSSLDG00000012080) #22 rab25b (ENSSLDG00000012091) #20 rab11al (ENSSLDG00000012116) ENSSLDG00000012129 lmna (ENSSLDG00000012145) #18 ENSSLDG00000012240 gpatch4 (ENSSLDG00000012365) ENSSLDG00000012383 tspan13a (ENSSLDG00000012407) bag6 (ENSSLDG00000012455) ENSSLDG00000012553 glrx3 (ENSSLDG00000012568) ENSSLDG00000012579 ENSSLDG00000012591 tnfb (ENSSLDG00000012604) GABBR1 (ENSSLDG00000012634) Barramundi perch MODERN SPECIES 104 otud7b (ENSLCAG00010001374) mtmr11 (ENSLCAG00010001385) SV2A (ENSLCAG00010001399) bola1 (ENSLCAG00010001414) nr2f5 (ENSLCAG00010001419) ENSLCAG00010001426 rpz (ENSLCAG00010001429) rpz6 (ENSLCAG00010001431) rpz5 (ENSLCAG00010001433) rpz4 (ENSLCAG00010001434) ENSLCAG00010001436 ENSLCAG00010001441 ENSLCAG00010001444 ENSLCAG00010001445 zgc:174938 (ENSLCAG00010001449) ubqln4 (ENSLCAG00010001452) #22 lamtor2 (ENSLCAG00010001456) #21 rab25b (ENSLCAG00010001467) #20 rab11al (ENSLCAG00010001475) ENSLCAG00010001496 lmna (ENSLCAG00010001534) #18 ENSLCAG00010001595 gpatch4 (ENSLCAG00010001603) ENSLCAG00010001606 ENSLCAG00010001609 tspan13a (ENSLCAG00010001613) bag6 (ENSLCAG00010001641) glrx3 (ENSLCAG00010001678) ENSLCAG00010001680 ENSLCAG00010001682 tnfb (ENSLCAG00010001689) Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00510000049239.b.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.h.b.b ENSGT00510000051675.g ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT00940000167246 ENSGT01030000234575.c.a.a.a.a.a.b.b.a ENSGT00940000157010.m ENSGT00390000016199.a ENSGT00550000075030 ENSGT00940000169242 ENSGT00940000171828 ENSGT01060000248544.a.b.b.a Turbot MODERN SPECIES ENSSMAG00000010511 EIF2B1 (ENSSMAG00000010476) ddx55 (ENSSMAG00000010441) tmed2 (ENSSMAG00000010428) ptpn11a (ENSSMAG00000010396) ENSSMAG00000010362 pla2g3 (ENSSMAG00000010333) ENSSMAG00000015914 pitpnb (ENSSMAG00000015998) ENSSMAG00000016014 ENSSMAG00000016058 tor4aa (ENSSMAG00000016098) ENSSMAG00000016105 ENSSMAG00000027216 ENSSMAG00000016129 ubqln4 (ENSSMAG00000016169) #22 zgc:174938 (ENSSMAG00000016164) lamtor2 (ENSSMAG00000016176) #21 rab25b (ENSSMAG00000016183) #20 rab11al (ENSSMAG00000016206) ENSSMAG00000016216 LMNA (ENSSMAG00000016221) #18 ENSSMAG00000016239 ENSSMAG00000016329 ENSSMAG00000016340 ENSSMAG00000016351 tspan13a (ENSSMAG00000016378) bag6 (ENSSMAG00000016500) ENSSMAG00000016524 ENSSMAG00000016541 ENSSMAG00000016548 Pinecone sodierfish MODERN SPECIES 7 bola1 (ENSMMDG00005003158) nr2f5 (ENSMMDG00005003152) ENSMMDG00005003131 rpz (ENSMMDG00005003122) ENSMMDG00005003118 ENSMMDG00005003117 rpz5 (ENSMMDG00005003114) rpz4 (ENSMMDG00005003112) ENSMMDG00005003108 rpz (ENSMMDG00005003104) ENSMMDG00005003102 rpz (ENSMMDG00005003100) ENSMMDG00005003094 ENSMMDG00005003085 zgc:174938 (ENSMMDG00005003081) ubqln4 (ENSMMDG00005003068) #22 lamtor2 (ENSMMDG00005003058) #21 rab25b (ENSMMDG00005003050) #20 rab11al (ENSMMDG00005003043) ENSMMDG00005003040 lmna (ENSMMDG00005003027) #18 ENSMMDG00005002812 gpatch4 (ENSMMDG00005002789) ENSMMDG00005002779 ENSMMDG00005002766 tspan13a (ENSMMDG00005002755) bag6 (ENSMMDG00005002697) glrx3 (ENSMMDG00005002672) ENSMMDG00005002662 ENSMMDG00005002651 tnfb (ENSMMDG00005002511) Otomorpha ANCESTRAL SPECIES 8 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT01010000223409 ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01030000234575.c.a.a.a.a.a.b.b ENSGT00940000167106 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Clupeiformes ANCESTRAL SPECIES 79 ENSGT00940000159412 ENSGT00760000119652 ENSGT00730000111185.db.a ENSGT00940000159172 ENSGT00940000160276 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b #18 ENSGT00940000155333.B ENSGT00390000008765 ENSGT01100000263776 ENSGT00940000167106 ENSGT00940000159463 #7 ENSGT00950000182844.b.b.a #8 ENSGT00940000161384 ENSGT00940000157343.a.b ENSGT00940000159724 ENSGT00530000063745.a Atlantic herring MODERN SPECIES 2 rbm8a (ENSCHAG00000009474) otud7b (ENSCHAG00000009441) mtmr11 (ENSCHAG00000009351) SV2A (ENSCHAG00000009146) bola1 (ENSCHAG00000009117) nr2f5 (ENSCHAG00000009093) ENSCHAG00000008936 rpz2 (ENSCHAG00000008923) rpz (ENSCHAG00000008914) ENSCHAG00000008805 rpz6 (ENSCHAG00000008797) rpz5 (ENSCHAG00000008789) rpz4 (ENSCHAG00000008787) tmem176l.4 (ENSCHAG00000008783) zgc:174938 (ENSCHAG00000008762) ubqln4 (ENSCHAG00000008716) #22 lamtor2 (ENSCHAG00000008683) #21 rab25b (ENSCHAG00000008626) #20 rab11al (ENSCHAG00000008561) ENSCHAG00000008553 lmna (ENSCHAG00000008483) #18 ENSCHAG00000008446 ENSCHAG00000008391 gpatch4 (ENSCHAG00000008364) ENSCHAG00000008348 ENSCHAG00000008339 ENSCHAG00000008333 mef2d (ENSCHAG00000007966) #7 rhbg (ENSCHAG00000006531) #8 hapln2 (ENSCHAG00000006483) bcan (ENSCHAG00000006421) Denticle herring MODERN SPECIES 15 smg5 (ENSDCDG00000014414) #12 PAQR6 (ENSDCDG00000014390) #13 ntrk1 (ENSDCDG00000014373) rbm8a (ENSDCDG00000014349) otud7b (ENSDCDG00000014335) mtmr11 (ENSDCDG00000014305) SV2A (ENSDCDG00000014031) bola1 (ENSDCDG00000013964) nr2f5 (ENSDCDG00000013941) rpz2 (ENSDCDG00000013924) rpz (ENSDCDG00000013912) rpz6 (ENSDCDG00000023300) rpz5 (ENSDCDG00000023298) rpz4 (ENSDCDG00000023296) zgc:174938 (ENSDCDG00000023295) ubqln4 (ENSDCDG00000023261) #22 lamtor2 (ENSDCDG00000023240) #21 rab25b (ENSDCDG00000023191) #20 rab11al (ENSDCDG00000023147) ENSDCDG00000023146 lmna (ENSDCDG00000023114) #18 ENSDCDG00000023091 gpatch4 (ENSDCDG00000023083) ENSDCDG00000023081 ENSDCDG00000023078 mef2d (ENSDCDG00000023068) #7 rhbg (ENSDCDG00000023016) #8 hapln2 (ENSDCDG00000023006) bcan (ENSDCDG00000022997) ENSDCDG00000022995 ENSDCDG00000022994 Otophysi ANCESTRAL SPECIES 1 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT01010000223409 ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00410000029015 ENSGT00940000155427.a ENSGT00950000182883.a.b.b ENSGT00390000005530.a.b ENSGT00950000183046.b.a ENSGT00390000015038 ENSGT00940000161647 ENSGT01090000260131 ENSGT00940000164651.a.a.d ENSGT00940000163195.A.c ENSGT00390000001883 Characiphysae ANCESTRAL SPECIES 37 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00410000029015 ENSGT00940000155427.a ENSGT00950000182883.a.b.b ENSGT00390000005530.a.b ENSGT00950000183046.b.a ENSGT00390000015038 ENSGT00940000161647 ENSGT01090000260131 ENSGT00940000164651.a.a.d ENSGT00940000163195.A.c ENSGT00390000001883 Channel catfish MODERN SPECIES 15 sv2a (ENSIPUG00000006382) bola1 (ENSIPUG00000006373) nr2f5 (ENSIPUG00000006336) rpz2 (ENSIPUG00000006329) rpz (ENSIPUG00000006322) rpz6 (ENSIPUG00000006309) rpz5 (ENSIPUG00000006301) rpz4 (ENSIPUG00000006299) tmem176l.2 (ENSIPUG00000006283) rpz (ENSIPUG00000006275) rpz5 (ENSIPUG00000006263) rpz2 (ENSIPUG00000006255) rpz2 (ENSIPUG00000006245) rpz5 (ENSIPUG00000006235) zgc:174938 (ENSIPUG00000006220) Ubqln4 (ENSIPUG00000006179) #22 lamtor2 (ENSIPUG00000006155) #21 Rab25 (ENSIPUG00000006126) #20 RAB11A (ENSIPUG00000006091) mex3a (ENSIPUG00000006083) ENSIPUG00000006069 THSD7A (ENSIPUG00000005855) ENSIPUG00000005827 ica1 (ENSIPUG00000005789) mios (ENSIPUG00000005746) col28a1b (ENSIPUG00000005698) ENSIPUG00000005674 septin7b (ENSIPUG00000005643) slc25a32 (ENSIPUG00000005619) CTHRC1 (ENSIPUG00000005595) CSMD3 (ENSIPUG00000005406) Characiphysae_b ANCESTRAL SPECIES 37 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00410000029015 ENSGT00940000155427.a ENSGT00950000182883.a.b.b ENSGT00390000005530.a.b ENSGT00950000183046.b.a ENSGT00390000015038 ENSGT00940000161647 ENSGT01090000260131 ENSGT00940000164651.a.a.d ENSGT00390000001883 ENSGT00940000178392 Characoidei ANCESTRAL SPECIES 34 ENSGT00760000119652 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00390000010118.c.a.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149 ENSGT00940000166523 ENSGT00410000029015 ENSGT00940000155427.a ENSGT00950000182883.a.b.b ENSGT00390000005530.a.b ENSGT00950000183046.b.a ENSGT00390000015038 ENSGT00940000163195.A.c ENSGT00940000161647 ENSGT01090000260131 ENSGT00940000164651.a.a.d ENSGT00390000001883 Red-bellied piranha MODERN SPECIES 144 ENSPNAG00000028689 SV2A (ENSPNAG00000005350) bola1 (ENSPNAG00000028796) nr2f5 (ENSPNAG00000005286) rpz2 (ENSPNAG00000006746) rpz (ENSPNAG00000006747) rpz6 (ENSPNAG00000006975) rpz5 (ENSPNAG00000004454) rpz5 (ENSPNAG00000004457) rpz4 (ENSPNAG00000004460) ENSPNAG00000005966 ENSPNAG00000005320 ENSPNAG00000006283 ENSPNAG00000006874 zgc:174938 (ENSPNAG00000004470) ubqln4 (ENSPNAG00000029005) #22 lamtor2 (ENSPNAG00000004495) #21 rab25b (ENSPNAG00000006569) #20 rab11al (ENSPNAG00000029085) ENSPNAG00000004505 ENSPNAG00000029110 THSD7A (ENSPNAG00000029273) ENSPNAG00000006797 ICA1 (ENSPNAG00000029356) GLCCI1 (ENSPNAG00000029367) mios (ENSPNAG00000029423) ENSPNAG00000005400 Mexicana tetra MODERN SPECIES 36 otud7b (ENSAMXG00000024852) ENSAMXG00000024623 mtmr11 (ENSAMXG00000024622) SV2A (ENSAMXG00000024624) bola1 (ENSAMXG00000025436) nr2f5 (ENSAMXG00000040260) rpz2 (ENSAMXG00000025025) rpz (ENSAMXG00000025026) rpz6 (ENSAMXG00000025027) rpz5 (ENSAMXG00000025028) rpz4 (ENSAMXG00000025029) ENSAMXG00000032508 ENSAMXG00000038518 ENSAMXG00000034787 zgc:174938 (ENSAMXG00000024628) ubqln4 (ENSAMXG00000024629) #22 lamtor2 (ENSAMXG00000039223) #21 rab25b (ENSAMXG00000029712) #20 rab11al (ENSAMXG00000024632) ENSAMXG00000024633 Electric eel MODERN SPECIES 219 rpz4 (ENSEEEG00000010518) zgc:174938 (ENSEEEG00000010515) ubqln4 (ENSEEEG00000010514) #22 lamtor2 (ENSEEEG00000010512) #21 rab25b (ENSEEEG00000010509) #20 rab11al (ENSEEEG00000010508) ENSEEEG00000010507 THSD7A (ENSEEEG00000010503) ENSEEEG00000010499 rbm24b (ENSEEEG00000010498) KIF13A (ENSEEEG00000010491) ENSEEEG00000010487 ptdss1a (ENSEEEG00000010482) si:ch211-269k10.5 (ENSEEEG00000010479) ENSEEEG00000010476 ENSEEEG00000010471 NKD2 (ENSEEEG00000010470) trip13 (ENSEEEG00000010432) Cyprinoidei ANCESTRAL SPECIES 25 ENSGT00730000111185.eb ENSGT00940000159172 ENSGT00940000160276 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a ENSGT00510000048165 ENSGT00940000165753 ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675.e.a ENSGT00390000010118.c.a.a ENSGT00510000051675.e.b.a ENSGT00940000155620.r #22 ENSGT00390000006100 #21 ENSGT00940000158230.b.a #20 ENSGT00940000165149.e ENSGT00940000166523 ENSGT00410000029015 ENSGT00940000155427.a ENSGT00950000182883.a.b.b ENSGT00390000005530.a.b ENSGT00950000183046.b.a ENSGT00390000015038 ENSGT00940000163195.A.c ENSGT00940000164651.a.a.d ENSGT00390000001883 ENSGT00940000154222.d.a.k ENSGT00920000149145 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 84 ENSGT00760000119652.h.b ENSGT00730000111185.eb.a ENSGT00940000159172.c ENSGT00940000160276.e ENSGT00950000182940.b.a.b.a.a.b ENSGT00940000165753.e ENSGT00940000165143.a.b.d ENSGT00940000165143.a.a.e.a.b ENSGT00390000008158.b.b.a.b.c.a ENSGT00390000008158.b.b.a.b.d ENSGT00390000008158.b.a.e ENSGT00390000008158.b.b.a.a.a ENSGT00390000010118.c.a.a.a.a ENSGT00940000163727.r ENSGT00510000051675.e.b.b ENSGT00940000155620.r.c #22 ENSGT00390000006100.p #21 ENSGT00940000158230.b.a.a.b #20 ENSGT00940000158230.b.a.b #20 ENSGT00940000165149.e.b ENSGT00940000166523.e ENSGT00410000029015.b ENSGT00940000155427.a.b ENSGT00950000182883.a.b.b.a.b ENSGT00390000005530.a.b.y ENSGT00950000183046.b.a.a ENSGT00390000015038.f ENSGT00390000001883 ENSGT00940000154222.d.a.k ENSGT00920000149145.m.a ENSGT00390000018094.l.a Goldfish MODERN SPECIES 35 ENSCARG00000050539 ENSCARG00000050558 rbm8a (ENSCARG00000050575) otud7b (ENSCARG00000050632) mtmr11 (ENSCARG00000050674) SV2A (ENSCARG00000050747) nr2f5 (ENSCARG00000050971) rpz (ENSCARG00000051041) ENSCARG00000051047 ENSCARG00000051078 rpz5 (ENSCARG00000051086) rpz4 (ENSCARG00000051098) ENSCARG00000051113 ENSCARG00000051145 tmem176l.2 (ENSCARG00000051174) ubqln4 (ENSCARG00000051231) #22 lamtor2 (ENSCARG00000051675) #21 rab25b (ENSCARG00000051711) #20 rab11al (ENSCARG00000051789) ENSCARG00000051816 ENSCARG00000051823 THSD7A (ENSCARG00000051904) ENSCARG00000052214 ENSCARG00000052226 ENSCARG00000052250 ENSCARG00000052270 mios (ENSCARG00000052288) ENSCARG00000052520 slc25a32b (ENSCARG00000052804) CTHRC1 (ENSCARG00000052835) CSMD3 (ENSCARG00000052896) Cyprininae_a ANCESTRAL SPECIES 78 ENSGT00760000119652.h.b ENSGT00730000111185.eb.a ENSGT00940000159172.c ENSGT00940000160276.e ENSGT00950000182940.b.a.b.a.a.b ENSGT00940000165753.e ENSGT00940000165143.a.b.d ENSGT00940000165143.a.a.e.a.b ENSGT00390000008158.b.b.a.b.c.a ENSGT00390000008158.b.b.a.b.d ENSGT00390000008158.b.a.e ENSGT00390000008158.b.b.a.a.a ENSGT00390000010118.c.a.a.a.a ENSGT00940000163727.r ENSGT00510000051675.e.b.b ENSGT00940000155620.r.c #22 ENSGT00390000006100.p #21 ENSGT00940000158230.b.a.a.b #20 ENSGT00940000158230.b.a.b #20 ENSGT00940000165149.e.b ENSGT00940000166523.e ENSGT00940000155427.a.b ENSGT00950000182883.a.b.b.a.b ENSGT00390000005530.a.b.y ENSGT00950000183046.b.a.a ENSGT00390000015038.f ENSGT00390000001883 ENSGT00940000154222.d.a.k ENSGT00920000149145.m.a ENSGT00390000018094.l.a ENSGT00940000155549.a.b.c Common carp reference MODERN SPECIES 2 otud7b (ENSCCRG00000062979) mtmr11 (ENSCCRG00000005000) SV2A (ENSCCRG00000003867) nr2f5 (ENSCCRG00000059545) rpz2 (ENSCCRG00000073194) rpz (ENSCCRG00000057350) ENSCCRG00000078456 rpz (ENSCCRG00000070641) ENSCCRG00000060201 rpz5 (ENSCCRG00000064692) rpz4 (ENSCCRG00000003698) ENSCCRG00000076342 ENSCCRG00000003694 ENSCCRG00000003662 ENSCCRG00000078437 ubqln4 (ENSCCRG00000050833) #22 lamtor2 (ENSCCRG00000003428) #21 rab25b (ENSCCRG00000003390) #20 rab11al (ENSCCRG00000058461) ENSCCRG00000064718 ENSCCRG00000047723 ENSCCRG00000076044 ENSCCRG00000082404 mios (ENSCCRG00000025187) ENSCCRG00000058022 ENSCCRG00000081747 slc25a32b (ENSCCRG00000075919) ENSCCRG00000078770 ENSCCRG00000064038 eif3ha (ENSCCRG00000023810) rad21a (ENSCCRG00000024578) Golden-line barbel MODERN SPECIES 149 ENSSGRG00000001706 ENSSGRG00000001702 rbm8a (ENSSGRG00000001665) otud7b (ENSSGRG00000001364) mtmr11 (ENSSGRG00000001328) SV2A (ENSSGRG00000001311) ENSSGRG00000001302 nr2f5 (ENSSGRG00000001240) rpz2 (ENSSGRG00000001223) ENSSGRG00000001214 ENSSGRG00000001207 rpz5 (ENSSGRG00000001195) rpz4 (ENSSGRG00000001186) ENSSGRG00000001174 ENSSGRG00000001156 ubqln4 (ENSSGRG00000053311) #22 lamtor2 (ENSSGRG00000053310) #21 rab25b (ENSSGRG00000053309) #20 rab11al (ENSSGRG00000053308) ENSSGRG00000053307 THSD7A (ENSSGRG00000053303) ENSSGRG00000053297 ENSSGRG00000053290 mios (ENSSGRG00000053286) ENSSGRG00000053284 septin7b (ENSSGRG00000052958) CTHRC1 (ENSSGRG00000052943) ENSSGRG00000052930 eif3ha (ENSSGRG00000052895) rad21a (ENSSGRG00000052859) EXT1 (ENSSGRG00000052834) Cyprininae ANCESTRAL SPECIES 83 ENSGT00940000159172.d ENSGT00940000160276.f ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a.a ENSGT00510000048165 ENSGT00940000165753.f ENSGT00940000165143.a.b.c ENSGT00940000165143.a.a.e.a.a ENSGT00390000008158.b.b.a.b.c.b.a ENSGT00940000165143.a.a.f ENSGT00390000008158.b.b.a.b.c.b.b.a.a ENSGT00390000008158.b.a.f ENSGT00390000008158.b.b.a.a.b ENSGT00510000051675.e.a ENSGT00390000010118.c.a.a.a.b ENSGT00940000155620.r.d #22 ENSGT00390000006100.o #21 ENSGT00940000158230.b.a.a.a #20 ENSGT00940000165149.e.a ENSGT00940000166523.f ENSGT00410000029015.a ENSGT00940000155427.a.a ENSGT00950000182883.a.b.b.a.a ENSGT00390000005530.a.b.x ENSGT00950000183046.b.a.b ENSGT00390000015038.e ENSGT00940000163195.A.c ENSGT00940000164651.a.a.d Goldfish MODERN SPECIES 7 ENSCARG00000002545 rbm8a (ENSCARG00000002532) otud7b (ENSCARG00000002511) mtmr11 (ENSCARG00000002481) SV2A (ENSCARG00000002253) bola1 (ENSCARG00000002189) nr2f5 (ENSCARG00000002177) rpz2 (ENSCARG00000002157) rpz (ENSCARG00000002148) ENSCARG00000002136 rpz (ENSCARG00000002127) ENSCARG00000002117 rpz5 (ENSCARG00000002111) rpz4 (ENSCARG00000002104) ENSCARG00000002034 ubqln4 (ENSCARG00000024882) #22 lamtor2 (ENSCARG00000024852) #21 rab25b (ENSCARG00000024813) #20 rab11al (ENSCARG00000024782) ENSCARG00000024765 ENSCARG00000024755 THSD7A (ENSCARG00000024164) ENSCARG00000024135 ICA1 (ENSCARG00000024114) ENSCARG00000024110 mios (ENSCARG00000024080) col28a1b (ENSCARG00000024055) ENSCARG00000023971 septin7b (ENSCARG00000020970) slc25a32b (ENSCARG00000020867) CTHRC1 (ENSCARG00000020857) Cyprininae_a ANCESTRAL SPECIES 117 ENSGT00940000159172.d ENSGT00940000160276.f ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a.a ENSGT00510000048165 ENSGT00940000165753.f ENSGT00940000165143.a.b.c ENSGT00940000165143.a.a.e.a.a ENSGT00390000008158.b.b.a.b.c.b.a ENSGT00940000165143.a.a.f ENSGT00390000008158.b.b.a.b.c.b.b.a.a ENSGT00390000008158.b.a.f ENSGT00390000008158.b.b.a.a.b ENSGT00510000051675.e.a ENSGT00390000010118.c.a.a.a.b ENSGT00940000155620.r.d #22 ENSGT00390000006100.o #21 ENSGT00940000158230.b.a.a.a #20 ENSGT00940000165149.f ENSGT00940000165149.e.a ENSGT00940000166523.f ENSGT00410000029015.a ENSGT00940000155427.a.a ENSGT00950000182883.a.b.b.a.a ENSGT00390000005530.a.b.x ENSGT00950000183046.b.a.b ENSGT00390000015038.e ENSGT00940000163195.A.c ENSGT00940000164651.a.a.d Common carp reference MODERN SPECIES 47 bola1 (ENSCCRG00000070204) nr2f5 (ENSCCRG00000040995) rpz2 (ENSCCRG00000072743) rpz (ENSCCRG00000068308) ENSCCRG00000003846 rpz (ENSCCRG00000059943) ENSCCRG00000079744 rpz5 (ENSCCRG00000068261) rpz4 (ENSCCRG00000003839) ENSCCRG00000058441 ENSCCRG00000003597 ENSCCRG00000003589 ENSCCRG00000058729 ENSCCRG00000003586 ENSCCRG00000003583 ubqln4 (ENSCCRG00000003459) #22 lamtor2 (ENSCCRG00000063048) #21 rab25b (ENSCCRG00000064751) #20 ENSCCRG00000003379 ENSCCRG00000067257 ENSCCRG00000031594 ENSCCRG00000043361 ENSCCRG00000069387 ENSCCRG00000037415 ENSCCRG00000037399 mios (ENSCCRG00000046225) col28a1b (ENSCCRG00000042004) ENSCCRG00000042019 septin7b (ENSCCRG00000078615) slc25a32b (ENSCCRG00000061846) ENSCCRG00000045364 Golden-line barbel MODERN SPECIES 152 otud7b (ENSSGRG00000048240) mtmr11 (ENSSGRG00000048241) SV2A (ENSSGRG00000048249) bola1 (ENSSGRG00000048479) nr2f5 (ENSSGRG00000048480) rpz2 (ENSSGRG00000048484) rpz (ENSSGRG00000048485) ENSSGRG00000048486 rpz (ENSSGRG00000048487) ENSSGRG00000048488 rpz5 (ENSSGRG00000048490) rpz4 (ENSSGRG00000048492) ENSSGRG00000048493 ENSSGRG00000048495 ENSSGRG00000048497 ubqln4 (ENSSGRG00000048501) #22 lamtor2 (ENSSGRG00000048585) #21 rab25b (ENSSGRG00000048591) #20 rab11al (ENSSGRG00000048595) ENSSGRG00000048597 ENSSGRG00000048598 THSD7A (ENSSGRG00000048604) ENSSGRG00000048621 ICA1 (ENSSGRG00000048623) mios (ENSSGRG00000048627) col28a1b (ENSSGRG00000048643) ENSSGRG00000048647 ENSSGRG00000048648 ENSSGRG00000048675 slc25a32b (ENSSGRG00000049805) CTHRC1 (ENSSGRG00000049808) Zebrafish MODERN SPECIES 7 rpz (ENSDARG00000091161) rpz2 (ENSDARG00000091215) rpz6 (ENSDARG00000089889) rpz3 (ENSDARG00000069728) rpz5 (ENSDARG00000075718) rpz4 (ENSDARG00000039871) ENSDARG00000099491 ENSDARG00000099715 ENSDARG00000087297 zgc:174938 (ENSDARG00000075622) ENSDARG00000105043 ENSDARG00000104134 ENSDARG00000098387 tmem176l.2 (ENSDARG00000089399) tmem176l.4 (ENSDARG00000074390) ubqln4 (ENSDARG00000052975) #22 lamtor2 (ENSDARG00000039872) #21 rab25b (ENSDARG00000052954) #20 rab11al (ENSDARG00000014340) ENSDARG00000076638 ENSDARG00000109561 THSD7A (ENSDARG00000090496) ENSDARG00000116433 ENSDARG00000098402 ICA1 (ENSDARG00000042608) mios (ENSDARG00000102587) col28a1b (ENSDARG00000087087) ENSDARG00000099098 ENSDARG00000021849 septin7b (ENSDARG00000052673) slc25a32b (ENSDARG00000026835) Reedfish MODERN SPECIES 10 snx27b (ENSECRG00000002678) ENSECRG00000002718 ENSECRG00000002749 ENSECRG00000002788 mtx1b (ENSECRG00000002792) thbs3b (ENSECRG00000002802) nudt17 (ENSECRG00000002806) ENSECRG00000002821 ENSECRG00000002853 #13 smg5 (ENSECRG00000003050) #12 ENSECRG00000003110 dcst2 (ENSECRG00000003185) ENSECRG00000003203 ENSECRG00000003210 ENSECRG00000003217 ubqln4 (ENSECRG00000003226) #22 lamtor2 (ENSECRG00000003252) #21 rab25b (ENSECRG00000003294) #20 rab11al (ENSECRG00000003309) ENSECRG00000003322 ENSECRG00000003355 ENSECRG00000003409 jtb (ENSECRG00000003421) ENSECRG00000003430 CREB3L4 (ENSECRG00000003438) SLC39A1 (ENSECRG00000003449) ENSECRG00000003464 DENND4B (ENSECRG00000003498) ENSECRG00000003544 #15 ENSECRG00000003560 gnrhr1 (ENSECRG00000003574) Cyclostomata ANCESTRAL SPECIES ENSGT00940000155620 #22 Hagfish MODERN SPECIES 1122 ENSEBUG00000015116 ENSEBUG00000005514 ENSEBUG00000012594 ndufb3 (ENSEBUG00000011870) ENSEBUG00000000442 ENSEBUG00000013334 rbm45 (ENSEBUG00000007042) ENSEBUG00000008367 ENSEBUG00000011941 ENSEBUG00000013166 rpe (ENSEBUG00000003712) ENSEBUG00000016505 ENSEBUG00000003107 ENSEBUG00000004594 ENSEBUG00000012662 ubqln4 (ENSEBUG00000008926) #22 ENSEBUG00000015695 ENSEBUG00000009731 ENSEBUG00000006596 ENSEBUG00000008551 gtf2a2 (ENSEBUG00000004457) gtf2a2 (ENSEBUG00000002935) snrpa1 (ENSEBUG00000006991) mibp2 (ENSEBUG00000001709) CELF5 (ENSEBUG00000009548) ENSEBUG00000001580 ENSEBUG00000001301 ENSEBUG00000011846 ENSEBUG00000015044 ENSEBUG00000003637 ENSEBUG00000006243 Lamprey MODERN SPECIES 1843 ENSPMAG00000003414 UBQLN4 (ENSPMAG00000003415) #22 rbm4.2 (ENSPMAG00000003433) Ciona ANCESTRAL SPECIES 1125 ENSGT00940000155620 #22 ENSGT00390000003453 Ciona intestinalis MODERN SPECIES 8 ENSCING00000017952 ENSCING00000008778 ENSCING00000013442 ENSCING00000008779 ENSCING00000020997 ENSCING00000013443 ENSCING00000017929 ENSCING00000013444 ENSCING00000024492 ENSCING00000024572 ENSCING00000019526 ENSCING00000013445 ENSCING00000013446 ENSCING00000013447 ENSCING00000023409 ENSCING00000008783 #22 ENSCING00000008788 ENSCING00000019945 ENSCING00000009822 ENSCING00000019580 ENSCING00000009823 foxm (ENSCING00000008790) ENSCING00000013450 ENSCING00000019370 ENSCING00000020811 ENSCING00000013451 ENSCING00000022701 ENSCING00000008793 ENSCING00000021395 ENSCING00000018255 ENSCING00000009824 Ciona savignyi MODERN SPECIES 214 ENSCSAVG00000006436 ENSCSAVG00000006434 ENSCSAVG00000006404 ENSCSAVG00000006400 ENSCSAVG00000006394 ENSCSAVG00000006392 ENSCSAVG00000006334 ENSCSAVG00000006330 ENSCSAVG00000005264 ENSCSAVG00000005184 ENSCSAVG00000005044 ENSCSAVG00000005039 ENSCSAVG00000005037 ENSCSAVG00000005032 ENSCSAVG00000005031 ENSCSAVG00000004686 #22 ENSCSAVG00000004680 ENSCSAVG00000004674 ENSCSAVG00000004601 ENSCSAVG00000004571 ENSCSAVG00000004568 ENSCSAVG00000004555 ENSCSAVG00000004537 ENSCSAVG00000004532 ENSCSAVG00000004525 ENSCSAVG00000004521 ENSCSAVG00000004507 ENSCSAVG00000004504 ENSCSAVG00000003634 ENSCSAVG00000003628 ENSCSAVG00000003625