Murinae	ANCESTRAL SPECIES	5	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b #25	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #30	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.u #34	ENSGT00900000141074 #35	ENSGT00390000008859.b.c #36	ENSGT00940000162023 #37	ENSGT00940000154947
Mus	ANCESTRAL SPECIES	7	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b #25	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #30	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #33	ENSGT00900000141033.b.b.u #34	ENSGT00900000141074 #35	ENSGT00390000008859.b.c #36	ENSGT00940000162023 #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131.e #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b #25	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #30	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #33	ENSGT00900000141033.b.b.u #34	ENSGT00900000141074 #35	ENSGT00390000008859.b.c #36	ENSGT00940000162023 #37
Ryukyu mouse	MODERN SPECIES	12	MGP_CAROLIEiJ_G0025158 #7	Tsacc (MGP_CAROLIEiJ_G0025159) #8	Cct3 (MGP_CAROLIEiJ_G0025160) #9	Glmp (MGP_CAROLIEiJ_G0025161) #10	Tmem79 (MGP_CAROLIEiJ_G0025162) #11	Smg5 (MGP_CAROLIEiJ_G0025163) #12	Paqr6 (MGP_CAROLIEiJ_G0025164) #13	MGP_CAROLIEiJ_G0025165 #14	Pmf1 (MGP_CAROLIEiJ_G0025166) #15	Slc25a44 (MGP_CAROLIEiJ_G0025167) #16	Sema4a (MGP_CAROLIEiJ_G0025168) #17	Lmna (MGP_CAROLIEiJ_G0025169) #18	Mex3a (MGP_CAROLIEiJ_G0025170) #19	Rab25 (MGP_CAROLIEiJ_G0025171) #20	Lamtor2 (MGP_CAROLIEiJ_G0025172) #21	Ubqln4 (MGP_CAROLIEiJ_G0025173) #22	Ssr2 (MGP_CAROLIEiJ_G0025174) #23	Arhgef2 (MGP_CAROLIEiJ_G0025175) #24	Rxfp4 (MGP_CAROLIEiJ_G0025176) #25	Khdc4 (MGP_CAROLIEiJ_G0025177) #26	Rit1 (MGP_CAROLIEiJ_G0025178) #27	Syt11 (MGP_CAROLIEiJ_G0025179) #28	MGP_CAROLIEiJ_G0025180 #29	Msto1 (MGP_CAROLIEiJ_G0025181) #30	Dap3 (MGP_CAROLIEiJ_G0025182) #31	Ash1l (MGP_CAROLIEiJ_G0025183) #32	MGP_CAROLIEiJ_G0025184 #33	Rusc1 (MGP_CAROLIEiJ_G0025185) #34	Fdps (MGP_CAROLIEiJ_G0025186) #35	Pklr (MGP_CAROLIEiJ_G0025187) #36	Hcn3 (MGP_CAROLIEiJ_G0025188) #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131.e #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b #25	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #30	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #33	ENSGT00900000141033.b.b.u #34	ENSGT00900000141074 #35	ENSGT00390000008859.b.c #36	ENSGT00940000162023 #37
Mouse	MODERN SPECIES	12	Cct3 (ENSMUSG00000001416) #9	Glmp (ENSMUSG00000001418) #10	Tmem79 (ENSMUSG00000001420) #11	Smg5 (ENSMUSG00000001415) #12	Paqr6 (ENSMUSG00000041423) #13	Bglap3 (ENSMUSG00000074489) #14	Bglap2 (ENSMUSG00000074486) #14	Bglap (ENSMUSG00000074483) #14	Pmf1 (ENSMUSG00000028066) #15	Slc25a44 (ENSMUSG00000050144) #16	Sema4a (ENSMUSG00000028064) #17	Lmna (ENSMUSG00000028063) #18	Mex3a (ENSMUSG00000074480) #19	Rab25 (ENSMUSG00000008601) #20	Lamtor2 (ENSMUSG00000028062) #21	Ubqln4 (ENSMUSG00000008604) #22	Ssr2 (ENSMUSG00000041355) #23	Arhgef2 (ENSMUSG00000028059) #24	Rxfp4 (ENSMUSG00000049741) #25	Khdc4 (ENSMUSG00000028060) #26	Rit1 (ENSMUSG00000028057) #27	Syt11 (ENSMUSG00000068923) #28	Gon4l (ENSMUSG00000054199) #29	Msto1 (ENSMUSG00000068922) #30	Dap3 (ENSMUSG00000068921) #31	Ash1l (ENSMUSG00000028053) #32	Rusc1 (ENSMUSG00000041263) #34	Fdps (ENSMUSG00000059743) #35	Pklr (ENSMUSG00000041237) #36	Hcn3 (ENSMUSG00000028051) #37	Clk2 (ENSMUSG00000068917)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131.e #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b #25	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #30	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #33	ENSGT00900000141033.b.b.u #34	ENSGT00900000141074 #35	ENSGT00390000008859.b.c #36	ENSGT00940000162023 #37
Steppe mouse	MODERN SPECIES	2494	ENSMSIG00000029349 #8	Cct3 (ENSMSIG00000029307) #9	Glmp (ENSMSIG00000029280) #10	Tmem79 (ENSMSIG00000029273) #11	Smg5 (ENSMSIG00000029250) #12	ENSMSIG00000029245 #13	ENSMSIG00000029238 #14	Pmf1 (ENSMSIG00000029235) #15	Slc25a44 (ENSMSIG00000029225) #16	ENSMSIG00000029223	Sema4a (ENSMSIG00000029207) #17	Lmna (ENSMSIG00000029196) #18	ENSMSIG00000029193 #19	Rab25 (ENSMSIG00000029192) #20	Lamtor2 (ENSMSIG00000029190) #21	Ubqln4 (ENSMSIG00000029187) #22	Ssr2 (ENSMSIG00000029173) #23	Arhgef2 (ENSMSIG00000028473) #24	ENSMSIG00000028469	Khdc4 (ENSMSIG00000028451) #26	Rit1 (ENSMSIG00000028448) #27	Syt11 (ENSMSIG00000028436) #28
spretus	MODERN SPECIES	12	Cct3 (MGP_SPRETEiJ_G0026101) #9	Glmp (MGP_SPRETEiJ_G0026102) #10	Tmem79 (MGP_SPRETEiJ_G0026103) #11	Smg5 (MGP_SPRETEiJ_G0026104) #12	Paqr6 (MGP_SPRETEiJ_G0026105) #13	MGP_SPRETEiJ_G0026106 #14	MGP_SPRETEiJ_G0026108 #14	MGP_SPRETEiJ_G0026107 #14	Pmf1 (MGP_SPRETEiJ_G0026109) #15	Slc25a44 (MGP_SPRETEiJ_G0026110) #16	Sema4a (MGP_SPRETEiJ_G0026111) #17	Lmna (MGP_SPRETEiJ_G0026112) #18	MGP_SPRETEiJ_G0026113 #19	Rab25 (MGP_SPRETEiJ_G0026114) #20	Lamtor2 (MGP_SPRETEiJ_G0026115) #21	Ubqln4 (MGP_SPRETEiJ_G0026116) #22	Ssr2 (MGP_SPRETEiJ_G0026117) #23	Arhgef2 (MGP_SPRETEiJ_G0026118) #24	Rxfp4 (MGP_SPRETEiJ_G0026119) #25	Khdc4 (MGP_SPRETEiJ_G0026120) #26	Rit1 (MGP_SPRETEiJ_G0026121) #27	Syt11 (MGP_SPRETEiJ_G0026122) #28	Gon4l (MGP_SPRETEiJ_G0026123) #29	Msto1 (MGP_SPRETEiJ_G0026124) #30	Dap3 (MGP_SPRETEiJ_G0026125) #31	Ash1l (MGP_SPRETEiJ_G0026126) #32	MGP_SPRETEiJ_G0026127 #33	Rusc1 (MGP_SPRETEiJ_G0026128) #34	Fdps (MGP_SPRETEiJ_G0026129) #35	Pklr (MGP_SPRETEiJ_G0026130) #36	Hcn3 (MGP_SPRETEiJ_G0026131) #37
Shrew mouse	MODERN SPECIES	17	Tsacc (MGP_PahariEiJ_G0026602) #8	MGP_PahariEiJ_G0026603 #9	Glmp (MGP_PahariEiJ_G0026604) #10	Tmem79 (MGP_PahariEiJ_G0026605) #11	Smg5 (MGP_PahariEiJ_G0026606) #12	Paqr6 (MGP_PahariEiJ_G0026607) #13	MGP_PahariEiJ_G0026610 #14	MGP_PahariEiJ_G0026609 #14	Pmf1 (MGP_PahariEiJ_G0026611) #15	Slc25a44 (MGP_PahariEiJ_G0026612) #16	Sema4a (MGP_PahariEiJ_G0026613) #17	Lmna (MGP_PahariEiJ_G0026614) #18	Mex3a (MGP_PahariEiJ_G0026615) #19	Rab25 (MGP_PahariEiJ_G0026616) #20	Lamtor2 (MGP_PahariEiJ_G0026617) #21	Ubqln4 (MGP_PahariEiJ_G0026618) #22	Ssr2 (MGP_PahariEiJ_G0026619) #23	Arhgef2 (MGP_PahariEiJ_G0026620) #24	Khdc4 (MGP_PahariEiJ_G0026621) #26	Rit1 (MGP_PahariEiJ_G0026622) #27	Syt11 (MGP_PahariEiJ_G0026623) #28	Gon4l (MGP_PahariEiJ_G0026624) #29	MGP_PahariEiJ_G0026625 #30	Dap3 (MGP_PahariEiJ_G0026626) #31	Ash1l (MGP_PahariEiJ_G0026627) #32	MGP_PahariEiJ_G0026628 #33	Rusc1 (MGP_PahariEiJ_G0026629) #34	Fdps (MGP_PahariEiJ_G0026630) #35	Pklr (MGP_PahariEiJ_G0026631) #36	Hcn3 (MGP_PahariEiJ_G0026632) #37	Clk2 (MGP_PahariEiJ_G0026633)
Rat	MODERN SPECIES	11	Rhbg (ENSRNOG00000019412) #7	Tsacc (ENSRNOG00000037552) #8	Cct3 (ENSRNOG00000019090) #9	Glmp (ENSRNOG00000019281) #10	Tmem79 (ENSRNOG00000019414) #11	Smg5 (ENSRNOG00000019590) #12	Paqr6 (ENSRNOG00000026059) #13	Bglap (ENSRNOG00000019607) #14	Pmf1 (ENSRNOG00000019620) #15	Slc25a44 (ENSRNOG00000025269) #16	Sema4a (ENSRNOG00000019737) #17	Lmna (ENSRNOG00000019638) #18	Mex3a (ENSRNOG00000058654) #19	Rab25 (ENSRNOG00000023640) #20	Lamtor2 (ENSRNOG00000019908) #21	Ubqln4 (ENSRNOG00000019933) #22	Ssr2 (ENSRNOG00000019940) #23	Arhgef2 (ENSRNOG00000020027) #24	Khdc4 (ENSRNOG00000020139) #26	Rit1 (ENSRNOG00000064584) #27	Syt11 (ENSRNOG00000020279) #28	Gon4l (ENSRNOG00000020297) #29	Msto1 (ENSRNOG00000020357) #30	Dap3 (ENSRNOG00000020373) #31	Ash1l (ENSRNOG00000020386) #32	Fdps (ENSRNOG00000043377) #34	Pklr (ENSRNOG00000020420) #36	Hcn3 (ENSRNOG00000020444) #37	Scamp3 (ENSRNOG00000020500)	Entrep3 (ENSRNOG00000020518)	Gba (ENSRNOG00000049281)