Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00390000012642 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 Glires ANCESTRAL SPECIES ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Rodentia ANCESTRAL SPECIES ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Rodentia_B ANCESTRAL SPECIES ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Kangaroo rat MODERN SPECIES 345 Sema4a (ENSDORG00000008821) #17 Lmna (ENSDORG00000002470) #18 Mex3a (ENSDORG00000002921) #19 Rab25 (ENSDORG00000002922) #20 Lamtor2 (ENSDORG00000002923) #21 Ubqln4 (ENSDORG00000010538) #22 ENSDORG00000010536 #23 Arhgef2 (ENSDORG00000012162) #24 Khdc4 (ENSDORG00000014602) #25 Rit1 (ENSDORG00000014601) #26 Syt11 (ENSDORG00000023709) #27 Gon4l (ENSDORG00000003598) #28 Msto1 (ENSDORG00000029541) #29 Dap3 (ENSDORG00000003596) #30 Ash1l (ENSDORG00000025575) #31 ENSDORG00000025813 #32 ENSDORG00000024404 #33 Fdps (ENSDORG00000005366) #34 ENSDORG00000028002 #35 Pklr (ENSDORG00000011632) #36 ENSDORG00000011629 #37 Myomorpha ANCESTRAL SPECIES 12 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Lesser Egyptian jerboa MODERN SPECIES 141 Mef2d (ENSJJAG00000011790) ENSJJAG00000017067 Cct3 (ENSJJAG00000013939) ENSJJAG00000019201 Tmem79 (ENSJJAG00000023610) Smg5 (ENSJJAG00000022763) Paqr6 (ENSJJAG00000001367) ENSJJAG00000000652 Pmf1 (ENSJJAG00000013470) Slc25a44 (ENSJJAG00000001462) Sema4a (ENSJJAG00000016229) #17 Lmna (ENSJJAG00000019904) #18 Mex3a (ENSJJAG00000020484) #19 Rab25 (ENSJJAG00000021013) #20 ENSJJAG00000021135 #21 Ubqln4 (ENSJJAG00000002118) #22 Ssr2 (ENSJJAG00000024209) #23 ENSJJAG00000016067 #24 ENSJJAG00000017646 #24 Rxfp4 (ENSJJAG00000013686) ENSJJAG00000020627 #25 Rit1 (ENSJJAG00000023411) #26 ENSJJAG00000010636 #27 ENSJJAG00000013614 #28 Msto1 (ENSJJAG00000019140) #29 Dap3 (ENSJJAG00000010235) #30 Ash1l (ENSJJAG00000017942) #31 Rusc1 (ENSJJAG00000001429) #32 Pklr (ENSJJAG00000019099) #36 Hcn3 (ENSJJAG00000017693) #37 Clk2 (ENSJJAG00000020860) Muroidea ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Cricetidae ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224.x ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Cricetinae ANCESTRAL SPECIES 13 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224.x ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Golden Hamster MODERN SPECIES 714 Iqgap3 (ENSMAUG00000008455) Mef2d (ENSMAUG00000016452) Rhbg (ENSMAUG00000009341) Tsacc (ENSMAUG00000016723) ENSMAUG00000014449 Tmem79 (ENSMAUG00000014791) Smg5 (ENSMAUG00000010381) Paqr6 (ENSMAUG00000010297) ENSMAUG00000015288 Pmf1 (ENSMAUG00000019629) Slc25a44 (ENSMAUG00000021047) ENSMAUG00000017061 #17 Lmna (ENSMAUG00000012838) #18 Mex3a (ENSMAUG00000012601) #19 Lamtor2 (ENSMAUG00000000547) #21 Ubqln4 (ENSMAUG00000007686) #22 Ssr2 (ENSMAUG00000021161) #23 ENSMAUG00000019940 #24 ENSMAUG00000013645 #24 Khdc4 (ENSMAUG00000019676) #25 Rit1 (ENSMAUG00000000572) #26 ENSMAUG00000013419 #27 ENSMAUG00000000631 #28 Msto1 (ENSMAUG00000020345) #29 Ash1l (ENSMAUG00000000702) #31 ENSMAUG00000017088 #32 Fdps (ENSMAUG00000020872) #34 Pklr (ENSMAUG00000012808) #36 Hcn3 (ENSMAUG00000017469) #37 Clk2 (ENSMAUG00000016789) Scamp3 (ENSMAUG00000010273) Chinese hamster chok1gshd MODERN SPECIES 352 Rhbg (ENSCGRG00001000730) Tsacc (ENSCGRG00001019825) Cct3 (ENSCGRG00001015935) Glmp (ENSCGRG00001007094) Tmem79 (ENSCGRG00001024551) Smg5 (ENSCGRG00001006336) Paqr6 (ENSCGRG00001016796) ENSCGRG00001014532 Pmf1 (ENSCGRG00001010918) Slc25a44 (ENSCGRG00001021651) Sema4a (ENSCGRG00001020918) #17 Lmna (ENSCGRG00001003129) #18 Mex3a (ENSCGRG00001000412) #19 Rab25 (ENSCGRG00001017341) #20 Lamtor2 (ENSCGRG00001008748) #21 Ubqln4 (ENSCGRG00001019653) #22 Ssr2 (ENSCGRG00001006822) #23 Arhgef2 (ENSCGRG00001006987) #24 Rxfp4 (ENSCGRG00001002374) Khdc4 (ENSCGRG00001012564) #25 Rit1 (ENSCGRG00001004542) #26 Syt11 (ENSCGRG00001023824) #27 Gon4l (ENSCGRG00001023253) #28 Msto1 (ENSCGRG00001015681) #29 Dap3 (ENSCGRG00001022521) #30 Ash1l (ENSCGRG00001011192) #31 Rusc1 (ENSCGRG00001009459) #32 Fdps (ENSCGRG00001025003) #34 ENSCGRG00001023534 Pklr (ENSCGRG00001023372) #36 Hcn3 (ENSCGRG00001011318) #37 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224.x ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Prairie vole DUPLICATION Prairie vole DUPLICATION Prairie vole MODERN SPECIES 8 ENSMOCG00000022002 Tsacc (ENSMOCG00000013419) Cct3 (ENSMOCG00000010144) Glmp (ENSMOCG00000009096) Tmem79 (ENSMOCG00000017414) Smg5 (ENSMOCG00000016590) Paqr6 (ENSMOCG00000006437) ENSMOCG00000019680 ENSMOCG00000018426 Slc25a44 (ENSMOCG00000014671) Sema4a (ENSMOCG00000022467) #17 Lmna (ENSMOCG00000011854) #18 Mex3a (ENSMOCG00000017881) #19 Rab25 (ENSMOCG00000010953) #20 Lamtor2 (ENSMOCG00000018988) #21 ENSMOCG00000013140 #22 Ssr2 (ENSMOCG00000001890) #23 ENSMOCG00000020991 #24 ENSMOCG00000019234 #24 ENSMOCG00000007816 #25 Prairie vole MODERN SPECIES 360 Ptchd1 (ENSMOCG00000020483) Prdx4 (ENSMOCG00000014602) ENSMOCG00000002108 Sat1 (ENSMOCG00000012276) ENSMOCG00000012729 ENSMOCG00000021049 ENSMOCG00000013763 Spin2c (ENSMOCG00000001348) ENSMOCG00000003551 Kctd12b (ENSMOCG00000015728) Klf8 (ENSMOCG00000000163) ENSMOCG00000002121 ENSMOCG00000013664 Rragb (ENSMOCG00000010568) Mageh1 (ENSMOCG00000010509) ENSMOCG00000010679 #22 Tmem29 (ENSMOCG00000020676) ENSMOCG00000021282 Alas2 (ENSMOCG00000021931) Apex2 (ENSMOCG00000004339) Pfkfb1 (ENSMOCG00000017052) ENSMOCG00000017394 Maged2 (ENSMOCG00000013159) Gnl3l (ENSMOCG00000021622) Fgd1 (ENSMOCG00000006370) Tsr2 (ENSMOCG00000006662) Wnk3 (ENSMOCG00000005941) Fam120c (ENSMOCG00000019667) Phf8 (ENSMOCG00000014989) Huwe1 (ENSMOCG00000009594) ENSMOCG00000000414 Prairie vole MODERN SPECIES 5 Ticam2 (ENSMOCG00000002517) Fem1c (ENSMOCG00000009368) Ccdc112 (ENSMOCG00000014847) Pggt1b (ENSMOCG00000020848) Trim36 (ENSMOCG00000005907) ENSMOCG00000000243 Kcnn2 (ENSMOCG00000021123) Ythdc2 (ENSMOCG00000011740) Mcc (ENSMOCG00000013709) Dcp2 (ENSMOCG00000014965) Myot (ENSMOCG00000002496) Gm10267 (ENSMOCG00000021096) Gm37797 (ENSMOCG00000014585) Spink12 (ENSMOCG00000003286) Spink6 (ENSMOCG00000022042) ENSMOCG00000016974 #22 Spink14 (ENSMOCG00000003998) Spink5 (ENSMOCG00000015103) Gm94 (ENSMOCG00000021778) Scgb3a2 (ENSMOCG00000004730) Spink1 (ENSMOCG00000020829) ENSMOCG00000011603 Jakmip2 (ENSMOCG00000020018) ENSMOCG00000019124 Stk32a (ENSMOCG00000013476) Ppp2r2b (ENSMOCG00000011221) Gpr151 (ENSMOCG00000010704) Tcerg1 (ENSMOCG00000021988) Pou4f3 (ENSMOCG00000014304) Rbm27 (ENSMOCG00000019479) Lars (ENSMOCG00000002092) Northern American deer mouse MODERN SPECIES 19 Rhbg (ENSPEMG00000011996) Tsacc (ENSPEMG00000014593) Cct3 (ENSPEMG00000015732) Glmp (ENSPEMG00000013529) Tmem79 (ENSPEMG00000007739) Smg5 (ENSPEMG00000001819) Paqr6 (ENSPEMG00000002777) ENSPEMG00000025586 Pmf1 (ENSPEMG00000012625) Slc25a44 (ENSPEMG00000013362) Sema4a (ENSPEMG00000015516) #17 Lmna (ENSPEMG00000015821) #18 Mex3a (ENSPEMG00000019014) #19 Rab25 (ENSPEMG00000007548) #20 Lamtor2 (ENSPEMG00000009818) #21 Ubqln4 (ENSPEMG00000016759) #22 Ssr2 (ENSPEMG00000012464) #23 Arhgef2 (ENSPEMG00000002997) #24 Rxfp4 (ENSPEMG00000011662) Khdc4 (ENSPEMG00000007794) #25 Rit1 (ENSPEMG00000030433) #26 Syt11 (ENSPEMG00000003809) #27 Gon4l (ENSPEMG00000017252) #28 Msto1 (ENSPEMG00000016178) #29 ENSPEMG00000019185 #30 Ash1l (ENSPEMG00000006789) #31 Rusc1 (ENSPEMG00000018232) #32 Fdps (ENSPEMG00000030569) #34 Pklr (ENSPEMG00000010915) #36 Hcn3 (ENSPEMG00000009033) #37 Clk2 (ENSPEMG00000012240) Murinae ANCESTRAL SPECIES 5 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b.u #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Mus ANCESTRAL SPECIES 7 ENSGT00950000182844.b.b.a.b ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b.v #32 ENSGT00900000141033.b.b.u #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 Mus_A ANCESTRAL SPECIES 9 ENSGT00950000182844.b.b.a.b ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131.e ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b.v #32 ENSGT00900000141033.b.b.u #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 Mus_B ANCESTRAL SPECIES 8 ENSGT00950000182844.b.b.a.b ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131.e ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b.v #32 ENSGT00900000141033.b.b.u #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 Mouse MODERN SPECIES 12 Cct3 (ENSMUSG00000001416) Glmp (ENSMUSG00000001418) Tmem79 (ENSMUSG00000001420) Smg5 (ENSMUSG00000001415) Paqr6 (ENSMUSG00000041423) Bglap3 (ENSMUSG00000074489) Bglap2 (ENSMUSG00000074486) Bglap (ENSMUSG00000074483) Pmf1 (ENSMUSG00000028066) Slc25a44 (ENSMUSG00000050144) Sema4a (ENSMUSG00000028064) #17 Lmna (ENSMUSG00000028063) #18 Mex3a (ENSMUSG00000074480) #19 Rab25 (ENSMUSG00000008601) #20 Lamtor2 (ENSMUSG00000028062) #21 Ubqln4 (ENSMUSG00000008604) #22 Ssr2 (ENSMUSG00000041355) #23 Arhgef2 (ENSMUSG00000028059) #24 Rxfp4 (ENSMUSG00000049741) Khdc4 (ENSMUSG00000028060) #25 Rit1 (ENSMUSG00000028057) #26 Syt11 (ENSMUSG00000068923) #27 Gon4l (ENSMUSG00000054199) #28 Msto1 (ENSMUSG00000068922) #29 Dap3 (ENSMUSG00000068921) #30 Ash1l (ENSMUSG00000028053) #31 Rusc1 (ENSMUSG00000041263) #32 Fdps (ENSMUSG00000059743) #34 Pklr (ENSMUSG00000041237) #36 Hcn3 (ENSMUSG00000028051) #37 Clk2 (ENSMUSG00000068917) Mus_C ANCESTRAL SPECIES 6 ENSGT00950000182844.b.b.a.b ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131.e ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b.v #32 ENSGT00900000141033.b.b.u #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 Steppe mouse MODERN SPECIES 2494 ENSMSIG00000029349 Cct3 (ENSMSIG00000029307) Glmp (ENSMSIG00000029280) Tmem79 (ENSMSIG00000029273) Smg5 (ENSMSIG00000029250) ENSMSIG00000029245 ENSMSIG00000029238 Pmf1 (ENSMSIG00000029235) Slc25a44 (ENSMSIG00000029225) ENSMSIG00000029223 Sema4a (ENSMSIG00000029207) #17 Lmna (ENSMSIG00000029196) #18 ENSMSIG00000029193 #19 Rab25 (ENSMSIG00000029192) #20 Lamtor2 (ENSMSIG00000029190) #21 Ubqln4 (ENSMSIG00000029187) #22 Ssr2 (ENSMSIG00000029173) #23 Arhgef2 (ENSMSIG00000028473) #24 ENSMSIG00000028469 Khdc4 (ENSMSIG00000028451) #25 Rit1 (ENSMSIG00000028448) #26 Syt11 (ENSMSIG00000028436) #27 spretus MODERN SPECIES 12 Cct3 (MGP_SPRETEiJ_G0026101) Glmp (MGP_SPRETEiJ_G0026102) Tmem79 (MGP_SPRETEiJ_G0026103) Smg5 (MGP_SPRETEiJ_G0026104) Paqr6 (MGP_SPRETEiJ_G0026105) MGP_SPRETEiJ_G0026106 MGP_SPRETEiJ_G0026108 MGP_SPRETEiJ_G0026107 Pmf1 (MGP_SPRETEiJ_G0026109) Slc25a44 (MGP_SPRETEiJ_G0026110) Sema4a (MGP_SPRETEiJ_G0026111) #17 Lmna (MGP_SPRETEiJ_G0026112) #18 MGP_SPRETEiJ_G0026113 #19 Rab25 (MGP_SPRETEiJ_G0026114) #20 Lamtor2 (MGP_SPRETEiJ_G0026115) #21 Ubqln4 (MGP_SPRETEiJ_G0026116) #22 Ssr2 (MGP_SPRETEiJ_G0026117) #23 Arhgef2 (MGP_SPRETEiJ_G0026118) #24 Rxfp4 (MGP_SPRETEiJ_G0026119) Khdc4 (MGP_SPRETEiJ_G0026120) #25 Rit1 (MGP_SPRETEiJ_G0026121) #26 Syt11 (MGP_SPRETEiJ_G0026122) #27 Gon4l (MGP_SPRETEiJ_G0026123) #28 Msto1 (MGP_SPRETEiJ_G0026124) #29 Dap3 (MGP_SPRETEiJ_G0026125) #30 Ash1l (MGP_SPRETEiJ_G0026126) #31 MGP_SPRETEiJ_G0026127 #32 Rusc1 (MGP_SPRETEiJ_G0026128) #32 Fdps (MGP_SPRETEiJ_G0026129) #34 Pklr (MGP_SPRETEiJ_G0026130) #36 Hcn3 (MGP_SPRETEiJ_G0026131) #37 Ryukyu mouse MODERN SPECIES 12 MGP_CAROLIEiJ_G0025158 Tsacc (MGP_CAROLIEiJ_G0025159) Cct3 (MGP_CAROLIEiJ_G0025160) Glmp (MGP_CAROLIEiJ_G0025161) Tmem79 (MGP_CAROLIEiJ_G0025162) Smg5 (MGP_CAROLIEiJ_G0025163) Paqr6 (MGP_CAROLIEiJ_G0025164) MGP_CAROLIEiJ_G0025165 Pmf1 (MGP_CAROLIEiJ_G0025166) Slc25a44 (MGP_CAROLIEiJ_G0025167) Sema4a (MGP_CAROLIEiJ_G0025168) #17 Lmna (MGP_CAROLIEiJ_G0025169) #18 Mex3a (MGP_CAROLIEiJ_G0025170) #19 Rab25 (MGP_CAROLIEiJ_G0025171) #20 Lamtor2 (MGP_CAROLIEiJ_G0025172) #21 Ubqln4 (MGP_CAROLIEiJ_G0025173) #22 Ssr2 (MGP_CAROLIEiJ_G0025174) #23 Arhgef2 (MGP_CAROLIEiJ_G0025175) #24 Rxfp4 (MGP_CAROLIEiJ_G0025176) Khdc4 (MGP_CAROLIEiJ_G0025177) #25 Rit1 (MGP_CAROLIEiJ_G0025178) #26 Syt11 (MGP_CAROLIEiJ_G0025179) #27 MGP_CAROLIEiJ_G0025180 #28 Msto1 (MGP_CAROLIEiJ_G0025181) #29 Dap3 (MGP_CAROLIEiJ_G0025182) #30 Ash1l (MGP_CAROLIEiJ_G0025183) #31 MGP_CAROLIEiJ_G0025184 #32 Rusc1 (MGP_CAROLIEiJ_G0025185) #32 Fdps (MGP_CAROLIEiJ_G0025186) #34 Pklr (MGP_CAROLIEiJ_G0025187) #36 Hcn3 (MGP_CAROLIEiJ_G0025188) #37 Shrew mouse MODERN SPECIES 17 Tsacc (MGP_PahariEiJ_G0026602) MGP_PahariEiJ_G0026603 Glmp (MGP_PahariEiJ_G0026604) Tmem79 (MGP_PahariEiJ_G0026605) Smg5 (MGP_PahariEiJ_G0026606) Paqr6 (MGP_PahariEiJ_G0026607) MGP_PahariEiJ_G0026610 MGP_PahariEiJ_G0026609 Pmf1 (MGP_PahariEiJ_G0026611) Slc25a44 (MGP_PahariEiJ_G0026612) Sema4a (MGP_PahariEiJ_G0026613) #17 Lmna (MGP_PahariEiJ_G0026614) #18 Mex3a (MGP_PahariEiJ_G0026615) #19 Rab25 (MGP_PahariEiJ_G0026616) #20 Lamtor2 (MGP_PahariEiJ_G0026617) #21 Ubqln4 (MGP_PahariEiJ_G0026618) #22 Ssr2 (MGP_PahariEiJ_G0026619) #23 Arhgef2 (MGP_PahariEiJ_G0026620) #24 Khdc4 (MGP_PahariEiJ_G0026621) #25 Rit1 (MGP_PahariEiJ_G0026622) #26 Syt11 (MGP_PahariEiJ_G0026623) #27 Gon4l (MGP_PahariEiJ_G0026624) #28 MGP_PahariEiJ_G0026625 #29 Dap3 (MGP_PahariEiJ_G0026626) #30 Ash1l (MGP_PahariEiJ_G0026627) #31 MGP_PahariEiJ_G0026628 #32 Rusc1 (MGP_PahariEiJ_G0026629) #32 Fdps (MGP_PahariEiJ_G0026630) #34 Pklr (MGP_PahariEiJ_G0026631) #36 Hcn3 (MGP_PahariEiJ_G0026632) #37 Clk2 (MGP_PahariEiJ_G0026633) Rat MODERN SPECIES 11 Rhbg (ENSRNOG00000019412) Tsacc (ENSRNOG00000037552) Cct3 (ENSRNOG00000019090) Glmp (ENSRNOG00000019281) Tmem79 (ENSRNOG00000019414) Smg5 (ENSRNOG00000019590) Paqr6 (ENSRNOG00000026059) Bglap (ENSRNOG00000019607) Pmf1 (ENSRNOG00000019620) Slc25a44 (ENSRNOG00000025269) Sema4a (ENSRNOG00000019737) #17 Lmna (ENSRNOG00000019638) #18 Mex3a (ENSRNOG00000058654) #19 Rab25 (ENSRNOG00000023640) #20 Lamtor2 (ENSRNOG00000019908) #21 Ubqln4 (ENSRNOG00000019933) #22 Ssr2 (ENSRNOG00000019940) #23 Arhgef2 (ENSRNOG00000020027) #24 Khdc4 (ENSRNOG00000020139) #25 Rit1 (ENSRNOG00000064584) #26 Syt11 (ENSRNOG00000020279) #27 Gon4l (ENSRNOG00000020297) #28 Msto1 (ENSRNOG00000020357) #29 Dap3 (ENSRNOG00000020373) #30 Ash1l (ENSRNOG00000020386) #31 Fdps (ENSRNOG00000043377) #32 Pklr (ENSRNOG00000020420) #36 Hcn3 (ENSRNOG00000020444) #37 Scamp3 (ENSRNOG00000020500) Entrep3 (ENSRNOG00000020518) Gba (ENSRNOG00000049281) Upper Galilee mountains blind mole rat MODERN SPECIES 497 Mef2d (ENSNGAG00000016036) Rhbg (ENSNGAG00000019322) Cct3 (ENSNGAG00000016875) Glmp (ENSNGAG00000019347) Tmem79 (ENSNGAG00000020294) Smg5 (ENSNGAG00000020706) Paqr6 (ENSNGAG00000000673) ENSNGAG00000001625 Pmf1 (ENSNGAG00000007750) Slc25a44 (ENSNGAG00000010575) Sema4a (ENSNGAG00000012750) #17 Lmna (ENSNGAG00000017368) #18 Mex3a (ENSNGAG00000019587) #19 Rab25 (ENSNGAG00000019999) #20 Lamtor2 (ENSNGAG00000020249) #21 Ubqln4 (ENSNGAG00000020831) #22 Ssr2 (ENSNGAG00000002859) #23 ENSNGAG00000009107 #24 ENSNGAG00000011350 #24 Khdc4 (ENSNGAG00000012421) #25 Rit1 (ENSNGAG00000013104) #26 Syt11 (ENSNGAG00000013529) #27 Gon4l (ENSNGAG00000020844) #28 Msto1 (ENSNGAG00000022769) #29 Dap3 (ENSNGAG00000014173) #30 Ash1l (ENSNGAG00000021986) #31 Rusc1 (ENSNGAG00000008260) #32 Pklr (ENSNGAG00000019876) #36 Hcn3 (ENSNGAG00000021908) #37 Clk2 (ENSNGAG00000022518) Scamp3 (ENSNGAG00000001034) Rodentia_A ANCESTRAL SPECIES ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Hystricomorpha ANCESTRAL SPECIES 45 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00570000079224.z.a ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 ENSGT00940000160917 Hystricomorpha_a ANCESTRAL SPECIES 54 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00570000079224.y ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 ENSGT00940000160917 Hystricomorpha_b ANCESTRAL SPECIES 61 ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00570000079224.z.a ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 ENSGT00940000160917 Degu MODERN SPECIES 73 MEF2D (ENSODEG00000010190) RHBG (ENSODEG00000009136) ENSODEG00000009974 GLMP (ENSODEG00000009800) TMEM79 (ENSODEG00000012508) SMG5 (ENSODEG00000012237) PAQR6 (ENSODEG00000010747) BGLAP (ENSODEG00000010926) PMF1 (ENSODEG00000011902) SLC25A44 (ENSODEG00000009774) SEMA4A (ENSODEG00000009359) #17 LMNA (ENSODEG00000009369) #18 MEX3A (ENSODEG00000009643) #19 RAB25 (ENSODEG00000009908) #20 LAMTOR2 (ENSODEG00000010141) #21 UBQLN4 (ENSODEG00000010901) #22 SSR2 (ENSODEG00000010659) #23 ARHGEF2 (ENSODEG00000011373) #24 ENSODEG00000019992 ENSODEG00000009528 #25 RIT1 (ENSODEG00000010128) #26 SYT11 (ENSODEG00000010870) #27 ENSODEG00000011008 #28 ENSODEG00000010737 MSTO1 (ENSODEG00000011191) #29 DAP3 (ENSODEG00000010674) #30 ASH1L (ENSODEG00000009920) #31 ENSODEG00000010812 #32 FDPS (ENSODEG00000010515) #34 PKLR (ENSODEG00000011272) #36 HCN3 (ENSODEG00000009743) #37 Long-tailed chinchilla MODERN SPECIES 252 MEF2D (ENSCLAG00000004702) RHBG (ENSCLAG00000004625) ENSCLAG00000004359 GLMP (ENSCLAG00000004192) TMEM79 (ENSCLAG00000004142) SMG5 (ENSCLAG00000003983) PAQR6 (ENSCLAG00000003899) BGLAP (ENSCLAG00000003710) PMF1 (ENSCLAG00000003672) SLC25A44 (ENSCLAG00000005587) SEMA4A (ENSCLAG00000005297) #17 LMNA (ENSCLAG00000003894) #18 MEX3A (ENSCLAG00000003842) #19 RAB25 (ENSCLAG00000003784) #20 LAMTOR2 (ENSCLAG00000003700) #21 UBQLN4 (ENSCLAG00000003519) #22 SSR2 (ENSCLAG00000003363) #23 ARHGEF2 (ENSCLAG00000013596) #24 KHDC4 (ENSCLAG00000010544) #25 RIT1 (ENSCLAG00000013305) #26 SYT11 (ENSCLAG00000013172) #27 ENSCLAG00000006556 #28 MSTO1 (ENSCLAG00000006273) #29 DAP3 (ENSCLAG00000005599) #30 ASH1L (ENSCLAG00000004536) #31 RUSC1 (ENSCLAG00000005579) #32 FDPS (ENSCLAG00000005410) #34 PKLR (ENSCLAG00000005136) #36 HCN3 (ENSCLAG00000005021) #37 CLK2 (ENSCLAG00000003873) SCAMP3 (ENSCLAG00000003649) Guinea pig MODERN SPECIES 10 MEF2D (ENSCPOG00000036656) RHBG (ENSCPOG00000011135) CCT3 (ENSCPOG00000009131) GLMP (ENSCPOG00000032634) TMEM79 (ENSCPOG00000033881) SMG5 (ENSCPOG00000015696) PAQR6 (ENSCPOG00000019726) BGLAP (ENSCPOG00000040505) PMF1 (ENSCPOG00000015695) SLC25A44 (ENSCPOG00000021129) SEMA4A (ENSCPOG00000015694) #17 LMNA (ENSCPOG00000023214) #18 MEX3A (ENSCPOG00000020219) #19 RAB25 (ENSCPOG00000002472) #20 LAMTOR2 (ENSCPOG00000032238) #21 UBQLN4 (ENSCPOG00000002467) #22 SSR2 (ENSCPOG00000023729) #23 ARHGEF2 (ENSCPOG00000025396) #24 ENSCPOG00000032356 KHDC4 (ENSCPOG00000004870) #25 RIT1 (ENSCPOG00000004868) #26 SYT11 (ENSCPOG00000004866) #27 ENSCPOG00000004859 #28 MSTO1 (ENSCPOG00000004857) #29 DAP3 (ENSCPOG00000030924) #30 ASH1L (ENSCPOG00000004801) #31 RUSC1 (ENSCPOG00000032934) #32 FDPS (ENSCPOG00000015363) #34 PKLR (ENSCPOG00000011202) #36 HCN3 (ENSCPOG00000027026) #37 CLK2 (ENSCPOG00000003176) Naked mole-rat female MODERN SPECIES 10 IQGAP3 (ENSHGLG00000018362) MEF2D (ENSHGLG00000019055) RHBG (ENSHGLG00000005998) ENSHGLG00000003153 GLMP (ENSHGLG00000041332) TMEM79 (ENSHGLG00000018185) SMG5 (ENSHGLG00000019152) PAQR6 (ENSHGLG00000015640) ENSHGLG00000007944 SLC25A44 (ENSHGLG00000042222) SEMA4A (ENSHGLG00000003587) #17 ENSHGLG00000036594 #18 MEX3A (ENSHGLG00000041429) #19 RAB25 (ENSHGLG00000005517) #20 LAMTOR2 (ENSHGLG00000036352) #21 UBQLN4 (ENSHGLG00000003684) #22 SSR2 (ENSHGLG00000035940) #23 RXFP4 (ENSHGLG00000037004) KHDC4 (ENSHGLG00000010495) #25 ENSHGLG00000034706 #26 SYT11 (ENSHGLG00000032288) #27 ENSHGLG00000006556 #28 MSTO1 (ENSHGLG00000018369) #29 DAP3 (ENSHGLG00000013978) #30 ASH1L (ENSHGLG00000008090) #31 ENSHGLG00000049863 ENSHGLG00000006300 #32 ENSHGLG00000005618 #34 Sciuridae ANCESTRAL SPECIES ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132.e #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Eurasian red squirrel MODERN SPECIES RHBG (ENSSVLG00005001146) TSACC (ENSSVLG00005001124) CCT3 (ENSSVLG00005001076) GLMP (ENSSVLG00005001024) ENSSVLG00005000998 SMG5 (ENSSVLG00005000972) PAQR6 (ENSSVLG00005000936) BGLAP (ENSSVLG00005000913) PMF1 (ENSSVLG00005000891) SLC25A44 (ENSSVLG00005000872) SEMA4A (ENSSVLG00005000802) #17 LMNA (ENSSVLG00005000714) #18 MEX3A (ENSSVLG00005000673) #19 RAB25 (ENSSVLG00005000653) #20 LAMTOR2 (ENSSVLG00005000628) #21 UBQLN4 (ENSSVLG00005000591) #22 SSR2 (ENSSVLG00005000552) #23 ARHGEF2 (ENSSVLG00005000357) #24 RXFP4 (ENSSVLG00005000258) KHDC4 (ENSSVLG00005000224) #25 ENSSVLG00005000188 #26 ENSSVLG00005000171 #27 ENSSVLG00005000147 #28 MSTO1 (ENSSVLG00005000136) #29 ENSSVLG00005000118 #31 RUSC1 (ENSSVLG00005000107) #32 FDPS (ENSSVLG00005000103) #34 PKLR (ENSSVLG00005000101) #36 HCN3 (ENSSVLG00005000099) #37 CLK2 (ENSSVLG00005019777) SCAMP3 (ENSSVLG00005019647) Marmotini ANCESTRAL SPECIES 33 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132.e #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Marmotini_b ANCESTRAL SPECIES 37 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01030000234534.B.a.a.b ENSGT00510000047412.a #25 ENSGT00940000160132.e #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Arctic ground squirrel MODERN SPECIES 309 RHBG (ENSUPAG00010004243) TSACC (ENSUPAG00010004234) CCT3 (ENSUPAG00010004189) GLMP (ENSUPAG00010004142) TMEM79 (ENSUPAG00010004129) SMG5 (ENSUPAG00010004091) ENSUPAG00010004061 BGLAP (ENSUPAG00010004045) PMF1 (ENSUPAG00010004034) SLC25A44 (ENSUPAG00010004013) SEMA4A (ENSUPAG00010003712) #17 LMNA (ENSUPAG00010003669) #18 MEX3A (ENSUPAG00010003653) #19 RAB25 (ENSUPAG00010003640) #20 LAMTOR2 (ENSUPAG00010003634) #21 UBQLN4 (ENSUPAG00010003613) #22 SSR2 (ENSUPAG00010003598) #23 ARHGEF2 (ENSUPAG00010003114) #24 ENSUPAG00010003101 KHDC4 (ENSUPAG00010003067) #25 ENSUPAG00010003055 #26 SYT11 (ENSUPAG00010003045) #27 ENSUPAG00010002975 #28 MSTO1 (ENSUPAG00010002943) #29 ENSUPAG00010002886 #30 ASH1L (ENSUPAG00010002818) #31 RUSC1 (ENSUPAG00010002787) #32 FDPS (ENSUPAG00010002775) #34 PKLR (ENSUPAG00010002743) #36 HCN3 (ENSUPAG00010002732) #37 CLK2 (ENSUPAG00010002672) Squirrel MODERN SPECIES 180 TSACC (ENSSTOG00000001810) CCT3 (ENSSTOG00000001798) GLMP (ENSSTOG00000015763) TMEM79 (ENSSTOG00000026140) SMG5 (ENSSTOG00000001780) PAQR6 (ENSSTOG00000001772) BGLAP (ENSSTOG00000027908) ENSSTOG00000034466 PMF1 (ENSSTOG00000001768) SLC25A44 (ENSSTOG00000001764) SEMA4A (ENSSTOG00000028050) #17 LMNA (ENSSTOG00000001758) #18 MEX3A (ENSSTOG00000024275) #19 RAB25 (ENSSTOG00000000634) #20 LAMTOR2 (ENSSTOG00000023389) #21 UBQLN4 (ENSSTOG00000020043) #22 SSR2 (ENSSTOG00000028971) #23 ARHGEF2 (ENSSTOG00000000620) #24 RXFP4 (ENSSTOG00000000616) KHDC4 (ENSSTOG00000004732) #25 RIT1 (ENSSTOG00000021028) #26 SYT11 (ENSSTOG00000004720) #27 ENSSTOG00000004664 #28 MSTO1 (ENSSTOG00000004655) #29 DAP3 (ENSSTOG00000004627) #30 ASH1L (ENSSTOG00000019952) #31 RUSC1 (ENSSTOG00000004516) #32 ENSSTOG00000004475 #34 PKLR (ENSSTOG00000022480) #36 HCN3 (ENSSTOG00000008989) #37 CLK2 (ENSSTOG00000008974) Alpin marmot MODERN SPECIES 85 RHBG (ENSMMMG00000013553) TSACC (ENSMMMG00000013564) CCT3 (ENSMMMG00000013571) GLMP (ENSMMMG00000013644) TMEM79 (ENSMMMG00000013693) SMG5 (ENSMMMG00000013706) PAQR6 (ENSMMMG00000013724) BGLAP (ENSMMMG00000013734) ENSMMMG00000013758 SLC25A44 (ENSMMMG00000013773) SEMA4A (ENSMMMG00000013785) #17 LMNA (ENSMMMG00000013831) #18 MEX3A (ENSMMMG00000013855) #19 RAB25 (ENSMMMG00000013857) #20 LAMTOR2 (ENSMMMG00000013864) #21 UBQLN4 (ENSMMMG00000013874) #22 SSR2 (ENSMMMG00000013889) #23 ARHGEF2 (ENSMMMG00000013899) #24 RXFP4 (ENSMMMG00000014101) KHDC4 (ENSMMMG00000014104) #25 ENSMMMG00000014145 #26 SYT11 (ENSMMMG00000014151) #27 ENSMMMG00000014163 #28 MSTO1 (ENSMMMG00000014213) #29 DAP3 (ENSMMMG00000014245) #30 ASH1L (ENSMMMG00000014324) #31 ENSMMMG00000014387 #32 FDPS (ENSMMMG00000014395) #34 PKLR (ENSMMMG00000014412) #36 HCN3 (ENSMMMG00000014457) #37 CLK2 (ENSMMMG00000014477) Lagomorpha ANCESTRAL SPECIES 1 ENSGT00950000182844.b.b.a ENSGT00390000012524 ENSGT00570000079224 ENSGT00390000005131 ENSGT00390000002390.b ENSGT00940000154566 ENSGT00940000160567 ENSGT00410000026290 ENSGT00940000162656 ENSGT00940000155399 ENSGT00940000161509 #17 ENSGT00940000157244 #18 ENSGT00940000161732 #19 ENSGT00940000158230 #20 ENSGT00390000006100 #21 ENSGT00940000155620 #22 ENSGT00390000005125 #23 ENSGT00940000158341 #24 ENSGT01090000260051.b.b ENSGT00510000047412.a #25 ENSGT00940000160132 #26 ENSGT00940000159088 #27 ENSGT00390000016256 #28 ENSGT00530000064067 #29 ENSGT00390000015248 #30 ENSGT00940000156698 #31 ENSGT00900000141033.b.b #32 ENSGT00900000141074 #34 ENSGT00390000008859.b.c #36 ENSGT00940000162023 #37 ENSGT00940000154947 Pika MODERN SPECIES 3341 SLC25A44 (ENSOPRG00000003022) SEMA4A (ENSOPRG00000002992) #17 LMNA (ENSOPRG00000002966) #18 MEX3A (ENSOPRG00000002937) #19 RAB25 (ENSOPRG00000002894) #20 LAMTOR2 (ENSOPRG00000002877) #21 UBQLN4 (ENSOPRG00000002851) #22 SSR2 (ENSOPRG00000002830) #23 ARHGEF2 (ENSOPRG00000002782) #24 Rabbit MODERN SPECIES 4 MEF2D (ENSOCUG00000012173) RHBG (ENSOCUG00000016130) TSACC (ENSOCUG00000029754) CCT3 (ENSOCUG00000000137) GLMP (ENSOCUG00000026609) ENSOCUG00000012899 SMG5 (ENSOCUG00000012886) BGLAP (ENSOCUG00000025958) PMF1 (ENSOCUG00000012870) SLC25A44 (ENSOCUG00000012861) SEMA4A (ENSOCUG00000001326) #17 LMNA (ENSOCUG00000010011) #18 ENSOCUG00000005640 #19 RAB25 (ENSOCUG00000005634) #20 LAMTOR2 (ENSOCUG00000027994) #21 UBQLN4 (ENSOCUG00000007156) #22 SSR2 (ENSOCUG00000008455) #23 ARHGEF2 (ENSOCUG00000001937) #24 ENSOCUG00000026819 KHDC4 (ENSOCUG00000010430) #25 RIT1 (ENSOCUG00000006377) #26 SYT11 (ENSOCUG00000027971) #27 ENSOCUG00000026145 #28 ENSOCUG00000010191 #28 MSTO1 (ENSOCUG00000010186) #29 DAP3 (ENSOCUG00000004785) #30 ENSOCUG00000034353 ASH1L (ENSOCUG00000014986) #31 ENSOCUG00000038913 #32 FDPS (ENSOCUG00000033536) #34 PKLR (ENSOCUG00000014969) #36 Tree shrew MODERN SPECIES 3906 LMNA (ENSTBEG00000005069) #18 RAB25 (ENSTBEG00000004142) #20 LAMTOR2 (ENSTBEG00000003768) #21 UBQLN4 (ENSTBEG00000003066) #22 SSR2 (ENSTBEG00000002867) #23 ARHGEF2 (ENSTBEG00000001641) #24 RXFP4 (ENSTBEG00000001002)