Glires	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Rodentia	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00940000159463 #7	ENSGT00950000182844.b.b.a #8	ENSGT00570000079224.z.a #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36	ENSGT00940000160917 #37
Hystricomorpha_a	ANCESTRAL SPECIES	54	ENSGT00940000159463 #7	ENSGT00950000182844.b.b.a #8	ENSGT00570000079224.y ##9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36	ENSGT00940000160917 #37
Hystricomorpha_b	ANCESTRAL SPECIES	61	ENSGT00940000159463 #7	ENSGT00950000182844.b.b.a #8	ENSGT00570000079224.z.a #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36	ENSGT00940000160917 #37
Long-tailed chinchilla	MODERN SPECIES	252	MEF2D (ENSCLAG00000004702) #7	RHBG (ENSCLAG00000004625) #8	ENSCLAG00000004359 #9	GLMP (ENSCLAG00000004192) #10	TMEM79 (ENSCLAG00000004142) #11	SMG5 (ENSCLAG00000003983) #12	PAQR6 (ENSCLAG00000003899) #13	BGLAP (ENSCLAG00000003710) #14	PMF1 (ENSCLAG00000003672) #15	SLC25A44 (ENSCLAG00000005587) #16	SEMA4A (ENSCLAG00000005297) #17	LMNA (ENSCLAG00000003894) #18	MEX3A (ENSCLAG00000003842) #19	RAB25 (ENSCLAG00000003784) #20	LAMTOR2 (ENSCLAG00000003700) #21	UBQLN4 (ENSCLAG00000003519) #22	SSR2 (ENSCLAG00000003363) #23	ARHGEF2 (ENSCLAG00000013596) #24	KHDC4 (ENSCLAG00000010544) #25	RIT1 (ENSCLAG00000013305) #26	SYT11 (ENSCLAG00000013172) #27	ENSCLAG00000006556 #28	MSTO1 (ENSCLAG00000006273) #29	DAP3 (ENSCLAG00000005599) #30	ASH1L (ENSCLAG00000004536) #31	RUSC1 (ENSCLAG00000005579) #32	FDPS (ENSCLAG00000005410) #33	PKLR (ENSCLAG00000005136) #34	HCN3 (ENSCLAG00000005021) #35	CLK2 (ENSCLAG00000003873) #36	SCAMP3 (ENSCLAG00000003649) #37
Degu	MODERN SPECIES	73	MEF2D (ENSODEG00000010190) #7	RHBG (ENSODEG00000009136) #8	ENSODEG00000009974 ##9	GLMP (ENSODEG00000009800) #10	TMEM79 (ENSODEG00000012508) #11	SMG5 (ENSODEG00000012237) #12	PAQR6 (ENSODEG00000010747) #13	BGLAP (ENSODEG00000010926) #14	PMF1 (ENSODEG00000011902) #15	SLC25A44 (ENSODEG00000009774) #16	SEMA4A (ENSODEG00000009359) #17	LMNA (ENSODEG00000009369) #18	MEX3A (ENSODEG00000009643) #19	RAB25 (ENSODEG00000009908) #20	LAMTOR2 (ENSODEG00000010141) #21	UBQLN4 (ENSODEG00000010901) #22	SSR2 (ENSODEG00000010659) #23	ARHGEF2 (ENSODEG00000011373) #24	ENSODEG00000019992	ENSODEG00000009528 #25	RIT1 (ENSODEG00000010128) #26	SYT11 (ENSODEG00000010870) #27	ENSODEG00000011008 #28	ENSODEG00000010737	MSTO1 (ENSODEG00000011191) #29	DAP3 (ENSODEG00000010674) #30	ASH1L (ENSODEG00000009920) #31	ENSODEG00000010812 #32	FDPS (ENSODEG00000010515) #33	PKLR (ENSODEG00000011272) #34	HCN3 (ENSODEG00000009743) #35
Guinea pig	MODERN SPECIES	10	MEF2D (ENSCPOG00000036656) #7	RHBG (ENSCPOG00000011135) #8	CCT3 (ENSCPOG00000009131) ##9	GLMP (ENSCPOG00000032634) #10	TMEM79 (ENSCPOG00000033881) #11	SMG5 (ENSCPOG00000015696) #12	PAQR6 (ENSCPOG00000019726) #13	BGLAP (ENSCPOG00000040505) #14	PMF1 (ENSCPOG00000015695) #15	SLC25A44 (ENSCPOG00000021129) #16	SEMA4A (ENSCPOG00000015694) #17	LMNA (ENSCPOG00000023214) #18	MEX3A (ENSCPOG00000020219) #19	RAB25 (ENSCPOG00000002472) #20	LAMTOR2 (ENSCPOG00000032238) #21	UBQLN4 (ENSCPOG00000002467) #22	SSR2 (ENSCPOG00000023729) #23	ARHGEF2 (ENSCPOG00000025396) #24	ENSCPOG00000032356	KHDC4 (ENSCPOG00000004870) #25	RIT1 (ENSCPOG00000004868) #26	SYT11 (ENSCPOG00000004866) #27	ENSCPOG00000004859 #28	MSTO1 (ENSCPOG00000004857) #29	DAP3 (ENSCPOG00000030924) #30	ASH1L (ENSCPOG00000004801) #31	RUSC1 (ENSCPOG00000032934) #32	FDPS (ENSCPOG00000015363) #33	PKLR (ENSCPOG00000011202) #34	HCN3 (ENSCPOG00000027026) #35	CLK2 (ENSCPOG00000003176) #36
Naked mole-rat female	MODERN SPECIES	10	IQGAP3 (ENSHGLG00000018362)	MEF2D (ENSHGLG00000019055) #7	RHBG (ENSHGLG00000005998) #8	ENSHGLG00000003153 #9	GLMP (ENSHGLG00000041332) #10	TMEM79 (ENSHGLG00000018185) #11	SMG5 (ENSHGLG00000019152) #12	PAQR6 (ENSHGLG00000015640) #13	ENSHGLG00000007944 #14	SLC25A44 (ENSHGLG00000042222) #16	SEMA4A (ENSHGLG00000003587) #17	ENSHGLG00000036594 #18	MEX3A (ENSHGLG00000041429) #19	RAB25 (ENSHGLG00000005517) #20	LAMTOR2 (ENSHGLG00000036352) #21	UBQLN4 (ENSHGLG00000003684) #22	SSR2 (ENSHGLG00000035940) #23	RXFP4 (ENSHGLG00000037004)	KHDC4 (ENSHGLG00000010495) #25	ENSHGLG00000034706 #26	SYT11 (ENSHGLG00000032288) #27	ENSHGLG00000006556 #28	MSTO1 (ENSHGLG00000018369) #29	DAP3 (ENSHGLG00000013978) #30	ASH1L (ENSHGLG00000008090) #31	ENSHGLG00000049863	ENSHGLG00000006300 #32	ENSHGLG00000005618 #33
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132.e #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Eurasian red squirrel	MODERN SPECIES		RHBG (ENSSVLG00005001146) #8	TSACC (ENSSVLG00005001124)	CCT3 (ENSSVLG00005001076) #9	GLMP (ENSSVLG00005001024) #10	ENSSVLG00005000998	SMG5 (ENSSVLG00005000972) #12	PAQR6 (ENSSVLG00005000936) #13	BGLAP (ENSSVLG00005000913) #14	PMF1 (ENSSVLG00005000891) #15	SLC25A44 (ENSSVLG00005000872) #16	SEMA4A (ENSSVLG00005000802) #17	LMNA (ENSSVLG00005000714) #18	MEX3A (ENSSVLG00005000673) #19	RAB25 (ENSSVLG00005000653) #20	LAMTOR2 (ENSSVLG00005000628) #21	UBQLN4 (ENSSVLG00005000591) #22	SSR2 (ENSSVLG00005000552) #23	ARHGEF2 (ENSSVLG00005000357) #24	RXFP4 (ENSSVLG00005000258)	KHDC4 (ENSSVLG00005000224) #25	ENSSVLG00005000188 #26	ENSSVLG00005000171 #27	ENSSVLG00005000147 #28	MSTO1 (ENSSVLG00005000136) #29	ENSSVLG00005000118 #31	RUSC1 (ENSSVLG00005000107) #32	FDPS (ENSSVLG00005000103) #33	PKLR (ENSSVLG00005000101) #34	HCN3 (ENSSVLG00005000099) #35	CLK2 (ENSSVLG00005019777) #36	SCAMP3 (ENSSVLG00005019647) #37
Marmotini	ANCESTRAL SPECIES	33	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132.e #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Marmotini_b	ANCESTRAL SPECIES	37	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132.e #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Arctic ground squirrel	MODERN SPECIES	309	RHBG (ENSUPAG00010004243) #8	TSACC (ENSUPAG00010004234)	CCT3 (ENSUPAG00010004189) #9	GLMP (ENSUPAG00010004142) #10	TMEM79 (ENSUPAG00010004129) #11	SMG5 (ENSUPAG00010004091) #12	ENSUPAG00010004061 #13	BGLAP (ENSUPAG00010004045) #14	PMF1 (ENSUPAG00010004034) #15	SLC25A44 (ENSUPAG00010004013) #16	SEMA4A (ENSUPAG00010003712) #17	LMNA (ENSUPAG00010003669) #18	MEX3A (ENSUPAG00010003653) #19	RAB25 (ENSUPAG00010003640) #20	LAMTOR2 (ENSUPAG00010003634) #21	UBQLN4 (ENSUPAG00010003613) #22	SSR2 (ENSUPAG00010003598) #23	ARHGEF2 (ENSUPAG00010003114) #24	ENSUPAG00010003101	KHDC4 (ENSUPAG00010003067) #25	ENSUPAG00010003055 #26	SYT11 (ENSUPAG00010003045) #27	ENSUPAG00010002975 #28	MSTO1 (ENSUPAG00010002943) #29	ENSUPAG00010002886 #30	ASH1L (ENSUPAG00010002818) #31	RUSC1 (ENSUPAG00010002787) #32	FDPS (ENSUPAG00010002775) #33	PKLR (ENSUPAG00010002743) #34	HCN3 (ENSUPAG00010002732) #35	CLK2 (ENSUPAG00010002672) #36
Squirrel	MODERN SPECIES	180	TSACC (ENSSTOG00000001810)	CCT3 (ENSSTOG00000001798) #9	GLMP (ENSSTOG00000015763) #10	TMEM79 (ENSSTOG00000026140) #11	SMG5 (ENSSTOG00000001780) #12	PAQR6 (ENSSTOG00000001772) #13	BGLAP (ENSSTOG00000027908) #14	ENSSTOG00000034466	PMF1 (ENSSTOG00000001768) #15	SLC25A44 (ENSSTOG00000001764) #16	SEMA4A (ENSSTOG00000028050) #17	LMNA (ENSSTOG00000001758) #18	MEX3A (ENSSTOG00000024275) #19	RAB25 (ENSSTOG00000000634) #20	LAMTOR2 (ENSSTOG00000023389) #21	UBQLN4 (ENSSTOG00000020043) #22	SSR2 (ENSSTOG00000028971) #23	ARHGEF2 (ENSSTOG00000000620) #24	RXFP4 (ENSSTOG00000000616)	KHDC4 (ENSSTOG00000004732) #25	RIT1 (ENSSTOG00000021028) #26	SYT11 (ENSSTOG00000004720) #27	ENSSTOG00000004664 #28	MSTO1 (ENSSTOG00000004655) #29	DAP3 (ENSSTOG00000004627) #30	ASH1L (ENSSTOG00000019952) #31	RUSC1 (ENSSTOG00000004516) #32	ENSSTOG00000004475 #33	PKLR (ENSSTOG00000022480) #34	HCN3 (ENSSTOG00000008989) #35	CLK2 (ENSSTOG00000008974) #36
Alpin marmot	MODERN SPECIES	85	RHBG (ENSMMMG00000013553) #8	TSACC (ENSMMMG00000013564)	CCT3 (ENSMMMG00000013571) #9	GLMP (ENSMMMG00000013644) #10	TMEM79 (ENSMMMG00000013693) #11	SMG5 (ENSMMMG00000013706) #12	PAQR6 (ENSMMMG00000013724) #13	BGLAP (ENSMMMG00000013734) #14	ENSMMMG00000013758	SLC25A44 (ENSMMMG00000013773) #16	SEMA4A (ENSMMMG00000013785) #17	LMNA (ENSMMMG00000013831) #18	MEX3A (ENSMMMG00000013855) #19	RAB25 (ENSMMMG00000013857) #20	LAMTOR2 (ENSMMMG00000013864) #21	UBQLN4 (ENSMMMG00000013874) #22	SSR2 (ENSMMMG00000013889) #23	ARHGEF2 (ENSMMMG00000013899) #24	RXFP4 (ENSMMMG00000014101)	KHDC4 (ENSMMMG00000014104) #25	ENSMMMG00000014145 #26	SYT11 (ENSMMMG00000014151) #27	ENSMMMG00000014163 #28	MSTO1 (ENSMMMG00000014213) #29	DAP3 (ENSMMMG00000014245) #30	ASH1L (ENSMMMG00000014324) #31	ENSMMMG00000014387 #32	FDPS (ENSMMMG00000014395) #33	PKLR (ENSMMMG00000014412) #34	HCN3 (ENSMMMG00000014457) #35	CLK2 (ENSMMMG00000014477) #36
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Kangaroo rat	MODERN SPECIES	345											Sema4a (ENSDORG00000008821) #17	Lmna (ENSDORG00000002470) #18	Mex3a (ENSDORG00000002921) #19	Rab25 (ENSDORG00000002922) #20	Lamtor2 (ENSDORG00000002923) #21	Ubqln4 (ENSDORG00000010538) #22	ENSDORG00000010536 #23	Arhgef2 (ENSDORG00000012162) #24	Khdc4 (ENSDORG00000014602) #25	Rit1 (ENSDORG00000014601) #26	Syt11 (ENSDORG00000023709) #27	Gon4l (ENSDORG00000003598) #28	Msto1 (ENSDORG00000029541) #29	Dap3 (ENSDORG00000003596) #30	Ash1l (ENSDORG00000025575) #31	ENSDORG00000025813 #32	ENSDORG00000024404 #32	Fdps (ENSDORG00000005366) #33	ENSDORG00000028002	Pklr (ENSDORG00000011632) #34	ENSDORG00000011629 #35
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Lesser Egyptian jerboa	MODERN SPECIES	141	Mef2d (ENSJJAG00000011790) #7	ENSJJAG00000017067	Cct3 (ENSJJAG00000013939) #9	ENSJJAG00000019201	Tmem79 (ENSJJAG00000023610) #11	Smg5 (ENSJJAG00000022763) #12	Paqr6 (ENSJJAG00000001367) #13	ENSJJAG00000000652 #14	Pmf1 (ENSJJAG00000013470) #15	Slc25a44 (ENSJJAG00000001462) #16	Sema4a (ENSJJAG00000016229) #17	Lmna (ENSJJAG00000019904) #18	Mex3a (ENSJJAG00000020484) #19	Rab25 (ENSJJAG00000021013) #20	ENSJJAG00000021135 #21	Ubqln4 (ENSJJAG00000002118) #22	Ssr2 (ENSJJAG00000024209) #23	ENSJJAG00000016067 #24	ENSJJAG00000017646 #24	Rxfp4 (ENSJJAG00000013686)	ENSJJAG00000020627 #25	Rit1 (ENSJJAG00000023411) #26	ENSJJAG00000010636 #27	ENSJJAG00000013614 #28	Msto1 (ENSJJAG00000019140) #29	Dap3 (ENSJJAG00000010235) #30	Ash1l (ENSJJAG00000017942) #31	Rusc1 (ENSJJAG00000001429) #32	Pklr (ENSJJAG00000019099) #34	Hcn3 (ENSJJAG00000017693) #35	Clk2 (ENSJJAG00000020860) #36
Muroidea	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224.x #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224.x #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Golden Hamster	MODERN SPECIES	714	Iqgap3 (ENSMAUG00000008455)	Mef2d (ENSMAUG00000016452) #7	Rhbg (ENSMAUG00000009341) #8	Tsacc (ENSMAUG00000016723)	ENSMAUG00000014449 #9	Tmem79 (ENSMAUG00000014791) #11	Smg5 (ENSMAUG00000010381) #12	Paqr6 (ENSMAUG00000010297) #13	ENSMAUG00000015288 #14	Pmf1 (ENSMAUG00000019629) #15	Slc25a44 (ENSMAUG00000021047) #16	ENSMAUG00000017061 #17	Lmna (ENSMAUG00000012838) #18	Mex3a (ENSMAUG00000012601) #19	Lamtor2 (ENSMAUG00000000547) #21	Ubqln4 (ENSMAUG00000007686) #22	Ssr2 (ENSMAUG00000021161) #23	ENSMAUG00000019940 #24	ENSMAUG00000013645 #24	Khdc4 (ENSMAUG00000019676) #25	Rit1 (ENSMAUG00000000572) #26	ENSMAUG00000013419 #27	ENSMAUG00000000631 #28	Msto1 (ENSMAUG00000020345) #29	Ash1l (ENSMAUG00000000702) #31	ENSMAUG00000017088 #32	Fdps (ENSMAUG00000020872) #33	Pklr (ENSMAUG00000012808) #34	Hcn3 (ENSMAUG00000017469) #35	Clk2 (ENSMAUG00000016789) #36	Scamp3 (ENSMAUG00000010273) #37
Chinese hamster chok1gshd	MODERN SPECIES	352	Rhbg (ENSCGRG00001000730) #8	Tsacc (ENSCGRG00001019825)	Cct3 (ENSCGRG00001015935) #9	Glmp (ENSCGRG00001007094) #10	Tmem79 (ENSCGRG00001024551) #11	Smg5 (ENSCGRG00001006336) #12	Paqr6 (ENSCGRG00001016796) #13	ENSCGRG00001014532 #14	Pmf1 (ENSCGRG00001010918) #15	Slc25a44 (ENSCGRG00001021651) #16	Sema4a (ENSCGRG00001020918) #17	Lmna (ENSCGRG00001003129) #18	Mex3a (ENSCGRG00001000412) #19	Rab25 (ENSCGRG00001017341) #20	Lamtor2 (ENSCGRG00001008748) #21	Ubqln4 (ENSCGRG00001019653) #22	Ssr2 (ENSCGRG00001006822) #23	Arhgef2 (ENSCGRG00001006987) #24	Rxfp4 (ENSCGRG00001002374)	Khdc4 (ENSCGRG00001012564) #25	Rit1 (ENSCGRG00001004542) #26	Syt11 (ENSCGRG00001023824) #27	Gon4l (ENSCGRG00001023253) #28	Msto1 (ENSCGRG00001015681) #29	Dap3 (ENSCGRG00001022521) #30	Ash1l (ENSCGRG00001011192) #31	Rusc1 (ENSCGRG00001009459) #32	Fdps (ENSCGRG00001025003) #33	ENSCGRG00001023534	Pklr (ENSCGRG00001023372) #34	Hcn3 (ENSCGRG00001011318) #35
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224.x #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	8	ENSMOCG00000022002	Tsacc (ENSMOCG00000013419)	Cct3 (ENSMOCG00000010144) #9	Glmp (ENSMOCG00000009096) #10	Tmem79 (ENSMOCG00000017414) #11	Smg5 (ENSMOCG00000016590) #12	Paqr6 (ENSMOCG00000006437) #13	ENSMOCG00000019680 #14	ENSMOCG00000018426 #15	Slc25a44 (ENSMOCG00000014671) #16	Sema4a (ENSMOCG00000022467) #17	Lmna (ENSMOCG00000011854) #18	Mex3a (ENSMOCG00000017881) #19	Rab25 (ENSMOCG00000010953) #20	Lamtor2 (ENSMOCG00000018988) #21	ENSMOCG00000013140 #22	Ssr2 (ENSMOCG00000001890) #23	ENSMOCG00000020991 #24	ENSMOCG00000019234 #24	ENSMOCG00000007816 #25
Prairie vole	MODERN SPECIES	360	Ptchd1 (ENSMOCG00000020483)	Prdx4 (ENSMOCG00000014602)	ENSMOCG00000002108	Sat1 (ENSMOCG00000012276)	ENSMOCG00000012729	ENSMOCG00000021049	ENSMOCG00000013763	Spin2c (ENSMOCG00000001348)	ENSMOCG00000003551	Kctd12b (ENSMOCG00000015728)	Klf8 (ENSMOCG00000000163)	ENSMOCG00000002121	ENSMOCG00000013664	Rragb (ENSMOCG00000010568)	Mageh1 (ENSMOCG00000010509)	ENSMOCG00000010679 #22	Tmem29 (ENSMOCG00000020676)	ENSMOCG00000021282	Alas2 (ENSMOCG00000021931)	Apex2 (ENSMOCG00000004339)	Pfkfb1 (ENSMOCG00000017052)	ENSMOCG00000017394	Maged2 (ENSMOCG00000013159)	Gnl3l (ENSMOCG00000021622)	Fgd1 (ENSMOCG00000006370)	Tsr2 (ENSMOCG00000006662)	Wnk3 (ENSMOCG00000005941)	Fam120c (ENSMOCG00000019667)	Phf8 (ENSMOCG00000014989)	Huwe1 (ENSMOCG00000009594)	ENSMOCG00000000414
Prairie vole	MODERN SPECIES	5	Ticam2 (ENSMOCG00000002517)	Fem1c (ENSMOCG00000009368)	Ccdc112 (ENSMOCG00000014847)	Pggt1b (ENSMOCG00000020848)	Trim36 (ENSMOCG00000005907)	ENSMOCG00000000243	Kcnn2 (ENSMOCG00000021123)	Ythdc2 (ENSMOCG00000011740)	Mcc (ENSMOCG00000013709)	Dcp2 (ENSMOCG00000014965)	Myot (ENSMOCG00000002496)	Gm10267 (ENSMOCG00000021096)	Gm37797 (ENSMOCG00000014585)	Spink12 (ENSMOCG00000003286)	Spink6 (ENSMOCG00000022042)	ENSMOCG00000016974 #22	Spink14 (ENSMOCG00000003998)	Spink5 (ENSMOCG00000015103)	Gm94 (ENSMOCG00000021778)	Scgb3a2 (ENSMOCG00000004730)	Spink1 (ENSMOCG00000020829)	ENSMOCG00000011603	Jakmip2 (ENSMOCG00000020018)	ENSMOCG00000019124	Stk32a (ENSMOCG00000013476)	Ppp2r2b (ENSMOCG00000011221)	Gpr151 (ENSMOCG00000010704)	Tcerg1 (ENSMOCG00000021988)	Pou4f3 (ENSMOCG00000014304)	Rbm27 (ENSMOCG00000019479)	Lars (ENSMOCG00000002092)
Northern American deer mouse	MODERN SPECIES	19	Rhbg (ENSPEMG00000011996) #8	Tsacc (ENSPEMG00000014593)	Cct3 (ENSPEMG00000015732) #9	Glmp (ENSPEMG00000013529) #10	Tmem79 (ENSPEMG00000007739) #11	Smg5 (ENSPEMG00000001819) #12	Paqr6 (ENSPEMG00000002777) #13	ENSPEMG00000025586 #14	Pmf1 (ENSPEMG00000012625) #15	Slc25a44 (ENSPEMG00000013362) #16	Sema4a (ENSPEMG00000015516) #17	Lmna (ENSPEMG00000015821) #18	Mex3a (ENSPEMG00000019014) #19	Rab25 (ENSPEMG00000007548) #20	Lamtor2 (ENSPEMG00000009818) #21	Ubqln4 (ENSPEMG00000016759) #22	Ssr2 (ENSPEMG00000012464) #23	Arhgef2 (ENSPEMG00000002997) #24	Rxfp4 (ENSPEMG00000011662)	Khdc4 (ENSPEMG00000007794) #25	Rit1 (ENSPEMG00000030433) #26	Syt11 (ENSPEMG00000003809) #27	Gon4l (ENSPEMG00000017252) #28	Msto1 (ENSPEMG00000016178) #29	ENSPEMG00000019185 #30	Ash1l (ENSPEMG00000006789) #31	Rusc1 (ENSPEMG00000018232) #32	Fdps (ENSPEMG00000030569) #33	Pklr (ENSPEMG00000010915) #34	Hcn3 (ENSPEMG00000009033) #35	Clk2 (ENSPEMG00000012240) #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b.u #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Mus	ANCESTRAL SPECIES	7	ENSGT00950000182844.b.b.a.b #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b.v #32	ENSGT00900000141033.b.b.u #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35
Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182844.b.b.a.b #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131.e #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b.v #32	ENSGT00900000141033.b.b.u #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182844.b.b.a.b #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131.e #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b.v #32	ENSGT00900000141033.b.b.u #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35
Mouse	MODERN SPECIES	12	Cct3 (ENSMUSG00000001416) #9	Glmp (ENSMUSG00000001418) #10	Tmem79 (ENSMUSG00000001420) #11	Smg5 (ENSMUSG00000001415) #12	Paqr6 (ENSMUSG00000041423) #13	Bglap3 (ENSMUSG00000074489) #14	Bglap2 (ENSMUSG00000074486) #14	Bglap (ENSMUSG00000074483) #14	Pmf1 (ENSMUSG00000028066) #15	Slc25a44 (ENSMUSG00000050144) #16	Sema4a (ENSMUSG00000028064) #17	Lmna (ENSMUSG00000028063) #18	Mex3a (ENSMUSG00000074480) #19	Rab25 (ENSMUSG00000008601) #20	Lamtor2 (ENSMUSG00000028062) #21	Ubqln4 (ENSMUSG00000008604) #22	Ssr2 (ENSMUSG00000041355) #23	Arhgef2 (ENSMUSG00000028059) #24	Rxfp4 (ENSMUSG00000049741)	Khdc4 (ENSMUSG00000028060) #25	Rit1 (ENSMUSG00000028057) #26	Syt11 (ENSMUSG00000068923) #27	Gon4l (ENSMUSG00000054199) #28	Msto1 (ENSMUSG00000068922) #29	Dap3 (ENSMUSG00000068921) #30	Ash1l (ENSMUSG00000028053) #31	Rusc1 (ENSMUSG00000041263) #32	Fdps (ENSMUSG00000059743) #33	Pklr (ENSMUSG00000041237) #34	Hcn3 (ENSMUSG00000028051) #35	Clk2 (ENSMUSG00000068917) #36
Mus_C	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a.b #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131.e #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b.v #32	ENSGT00900000141033.b.b.u #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35
Steppe mouse	MODERN SPECIES	2494	ENSMSIG00000029349	Cct3 (ENSMSIG00000029307) #9	Glmp (ENSMSIG00000029280) #10	Tmem79 (ENSMSIG00000029273) #11	Smg5 (ENSMSIG00000029250) #12	ENSMSIG00000029245 #13	ENSMSIG00000029238 #14	Pmf1 (ENSMSIG00000029235) #15	Slc25a44 (ENSMSIG00000029225) #16	ENSMSIG00000029223	Sema4a (ENSMSIG00000029207) #17	Lmna (ENSMSIG00000029196) #18	ENSMSIG00000029193 #19	Rab25 (ENSMSIG00000029192) #20	Lamtor2 (ENSMSIG00000029190) #21	Ubqln4 (ENSMSIG00000029187) #22	Ssr2 (ENSMSIG00000029173) #23	Arhgef2 (ENSMSIG00000028473) #24	ENSMSIG00000028469	Khdc4 (ENSMSIG00000028451) #25	Rit1 (ENSMSIG00000028448) #26	Syt11 (ENSMSIG00000028436) #27
spretus	MODERN SPECIES	12	Cct3 (MGP_SPRETEiJ_G0026101) #9	Glmp (MGP_SPRETEiJ_G0026102) #10	Tmem79 (MGP_SPRETEiJ_G0026103) #11	Smg5 (MGP_SPRETEiJ_G0026104) #12	Paqr6 (MGP_SPRETEiJ_G0026105) #13	MGP_SPRETEiJ_G0026106 #14	MGP_SPRETEiJ_G0026108 #14	MGP_SPRETEiJ_G0026107 #14	Pmf1 (MGP_SPRETEiJ_G0026109) #15	Slc25a44 (MGP_SPRETEiJ_G0026110) #16	Sema4a (MGP_SPRETEiJ_G0026111) #17	Lmna (MGP_SPRETEiJ_G0026112) #18	MGP_SPRETEiJ_G0026113 #19	Rab25 (MGP_SPRETEiJ_G0026114) #20	Lamtor2 (MGP_SPRETEiJ_G0026115) #21	Ubqln4 (MGP_SPRETEiJ_G0026116) #22	Ssr2 (MGP_SPRETEiJ_G0026117) #23	Arhgef2 (MGP_SPRETEiJ_G0026118) #24	Rxfp4 (MGP_SPRETEiJ_G0026119)	Khdc4 (MGP_SPRETEiJ_G0026120) #25	Rit1 (MGP_SPRETEiJ_G0026121) #26	Syt11 (MGP_SPRETEiJ_G0026122) #27	Gon4l (MGP_SPRETEiJ_G0026123) #28	Msto1 (MGP_SPRETEiJ_G0026124) #29	Dap3 (MGP_SPRETEiJ_G0026125) #30	Ash1l (MGP_SPRETEiJ_G0026126) #31	MGP_SPRETEiJ_G0026127 #32	Rusc1 (MGP_SPRETEiJ_G0026128) #32	Fdps (MGP_SPRETEiJ_G0026129) #33	Pklr (MGP_SPRETEiJ_G0026130) #34	Hcn3 (MGP_SPRETEiJ_G0026131) #35
Ryukyu mouse	MODERN SPECIES	12	MGP_CAROLIEiJ_G0025158 #8	Tsacc (MGP_CAROLIEiJ_G0025159)	Cct3 (MGP_CAROLIEiJ_G0025160) #9	Glmp (MGP_CAROLIEiJ_G0025161) #10	Tmem79 (MGP_CAROLIEiJ_G0025162) #11	Smg5 (MGP_CAROLIEiJ_G0025163) #12	Paqr6 (MGP_CAROLIEiJ_G0025164) #13	MGP_CAROLIEiJ_G0025165 #14	Pmf1 (MGP_CAROLIEiJ_G0025166) #15	Slc25a44 (MGP_CAROLIEiJ_G0025167) #16	Sema4a (MGP_CAROLIEiJ_G0025168) #17	Lmna (MGP_CAROLIEiJ_G0025169) #18	Mex3a (MGP_CAROLIEiJ_G0025170) #19	Rab25 (MGP_CAROLIEiJ_G0025171) #20	Lamtor2 (MGP_CAROLIEiJ_G0025172) #21	Ubqln4 (MGP_CAROLIEiJ_G0025173) #22	Ssr2 (MGP_CAROLIEiJ_G0025174) #23	Arhgef2 (MGP_CAROLIEiJ_G0025175) #24	Rxfp4 (MGP_CAROLIEiJ_G0025176)	Khdc4 (MGP_CAROLIEiJ_G0025177) #25	Rit1 (MGP_CAROLIEiJ_G0025178) #26	Syt11 (MGP_CAROLIEiJ_G0025179) #27	MGP_CAROLIEiJ_G0025180 #28	Msto1 (MGP_CAROLIEiJ_G0025181) #29	Dap3 (MGP_CAROLIEiJ_G0025182) #30	Ash1l (MGP_CAROLIEiJ_G0025183) #31	MGP_CAROLIEiJ_G0025184 #32	Rusc1 (MGP_CAROLIEiJ_G0025185) #32	Fdps (MGP_CAROLIEiJ_G0025186) #33	Pklr (MGP_CAROLIEiJ_G0025187) #34	Hcn3 (MGP_CAROLIEiJ_G0025188) #35
Shrew mouse	MODERN SPECIES	17	Tsacc (MGP_PahariEiJ_G0026602)	MGP_PahariEiJ_G0026603 #9	Glmp (MGP_PahariEiJ_G0026604) #10	Tmem79 (MGP_PahariEiJ_G0026605) #11	Smg5 (MGP_PahariEiJ_G0026606) #12	Paqr6 (MGP_PahariEiJ_G0026607) #13	MGP_PahariEiJ_G0026610 #14	MGP_PahariEiJ_G0026609 #14	Pmf1 (MGP_PahariEiJ_G0026611) #15	Slc25a44 (MGP_PahariEiJ_G0026612) #16	Sema4a (MGP_PahariEiJ_G0026613) #17	Lmna (MGP_PahariEiJ_G0026614) #18	Mex3a (MGP_PahariEiJ_G0026615) #19	Rab25 (MGP_PahariEiJ_G0026616) #20	Lamtor2 (MGP_PahariEiJ_G0026617) #21	Ubqln4 (MGP_PahariEiJ_G0026618) #22	Ssr2 (MGP_PahariEiJ_G0026619) #23	Arhgef2 (MGP_PahariEiJ_G0026620) #24	Khdc4 (MGP_PahariEiJ_G0026621) #25	Rit1 (MGP_PahariEiJ_G0026622) #26	Syt11 (MGP_PahariEiJ_G0026623) #27	Gon4l (MGP_PahariEiJ_G0026624) #28	MGP_PahariEiJ_G0026625 #29	Dap3 (MGP_PahariEiJ_G0026626) #30	Ash1l (MGP_PahariEiJ_G0026627) #31	MGP_PahariEiJ_G0026628 #32	Rusc1 (MGP_PahariEiJ_G0026629) #32	Fdps (MGP_PahariEiJ_G0026630) #33	Pklr (MGP_PahariEiJ_G0026631) #34	Hcn3 (MGP_PahariEiJ_G0026632) #35	Clk2 (MGP_PahariEiJ_G0026633) #36
Rat	MODERN SPECIES	11	Rhbg (ENSRNOG00000019412) #8	Tsacc (ENSRNOG00000037552)	Cct3 (ENSRNOG00000019090) #9	Glmp (ENSRNOG00000019281) #10	Tmem79 (ENSRNOG00000019414) #11	Smg5 (ENSRNOG00000019590) #12	Paqr6 (ENSRNOG00000026059) #13	Bglap (ENSRNOG00000019607) #14	Pmf1 (ENSRNOG00000019620) #15	Slc25a44 (ENSRNOG00000025269) #16	Sema4a (ENSRNOG00000019737) #17	Lmna (ENSRNOG00000019638) #18	Mex3a (ENSRNOG00000058654) #19	Rab25 (ENSRNOG00000023640) #20	Lamtor2 (ENSRNOG00000019908) #21	Ubqln4 (ENSRNOG00000019933) #22	Ssr2 (ENSRNOG00000019940) #23	Arhgef2 (ENSRNOG00000020027) #24	Khdc4 (ENSRNOG00000020139) #25	Rit1 (ENSRNOG00000064584) #26	Syt11 (ENSRNOG00000020279) #27	Gon4l (ENSRNOG00000020297) #28	Msto1 (ENSRNOG00000020357) #29	Dap3 (ENSRNOG00000020373) #30	Ash1l (ENSRNOG00000020386) #31	Fdps (ENSRNOG00000043377) #32	Pklr (ENSRNOG00000020420) #34	Hcn3 (ENSRNOG00000020444) #35	Scamp3 (ENSRNOG00000020500) #36	Entrep3 (ENSRNOG00000020518)	Gba (ENSRNOG00000049281)
Upper Galilee mountains blind mole rat	MODERN SPECIES	497	Mef2d (ENSNGAG00000016036) #7	Rhbg (ENSNGAG00000019322) #8	Cct3 (ENSNGAG00000016875) #9	Glmp (ENSNGAG00000019347) #10	Tmem79 (ENSNGAG00000020294) #11	Smg5 (ENSNGAG00000020706) #12	Paqr6 (ENSNGAG00000000673) #13	ENSNGAG00000001625 #14	Pmf1 (ENSNGAG00000007750) #15	Slc25a44 (ENSNGAG00000010575) #16	Sema4a (ENSNGAG00000012750) #17	Lmna (ENSNGAG00000017368) #18	Mex3a (ENSNGAG00000019587) #19	Rab25 (ENSNGAG00000019999) #20	Lamtor2 (ENSNGAG00000020249) #21	Ubqln4 (ENSNGAG00000020831) #22	Ssr2 (ENSNGAG00000002859) #23	ENSNGAG00000009107 #24	ENSNGAG00000011350 #24	Khdc4 (ENSNGAG00000012421) #25	Rit1 (ENSNGAG00000013104) #26	Syt11 (ENSNGAG00000013529) #27	Gon4l (ENSNGAG00000020844) #28	Msto1 (ENSNGAG00000022769) #29	Dap3 (ENSNGAG00000014173) #30	Ash1l (ENSNGAG00000021986) #31	Rusc1 (ENSNGAG00000008260) #32	Pklr (ENSNGAG00000019876) #34	Hcn3 (ENSNGAG00000021908) #35	Clk2 (ENSNGAG00000022518) #36	Scamp3 (ENSNGAG00000001034) #37
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00950000182844.b.b.a #8	ENSGT00390000012524	ENSGT00570000079224 #9	ENSGT00390000005131 #10	ENSGT00390000002390.b #11	ENSGT00940000154566 #12	ENSGT00940000160567 #13	ENSGT00410000026290 #14	ENSGT00940000162656 #15	ENSGT00940000155399 #16	ENSGT00940000161509 #17	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01090000260051.b.b	ENSGT00510000047412.a #25	ENSGT00940000160132 #26	ENSGT00940000159088 #27	ENSGT00390000016256 #28	ENSGT00530000064067 #29	ENSGT00390000015248 #30	ENSGT00940000156698 #31	ENSGT00900000141033.b.b #32	ENSGT00900000141074 #33	ENSGT00390000008859.b.c #34	ENSGT00940000162023 #35	ENSGT00940000154947 #36
Pika	MODERN SPECIES	3341										SLC25A44 (ENSOPRG00000003022) #16	SEMA4A (ENSOPRG00000002992) #17	LMNA (ENSOPRG00000002966) #18	MEX3A (ENSOPRG00000002937) #19	RAB25 (ENSOPRG00000002894) #20	LAMTOR2 (ENSOPRG00000002877) #21	UBQLN4 (ENSOPRG00000002851) #22	SSR2 (ENSOPRG00000002830) #23	ARHGEF2 (ENSOPRG00000002782) #24
Rabbit	MODERN SPECIES	4	MEF2D (ENSOCUG00000012173) #7	RHBG (ENSOCUG00000016130) #8	TSACC (ENSOCUG00000029754)	CCT3 (ENSOCUG00000000137) #9	GLMP (ENSOCUG00000026609) #10	ENSOCUG00000012899 #11	SMG5 (ENSOCUG00000012886) #12	BGLAP (ENSOCUG00000025958) #14	PMF1 (ENSOCUG00000012870) #15	SLC25A44 (ENSOCUG00000012861) #16	SEMA4A (ENSOCUG00000001326) #17	LMNA (ENSOCUG00000010011) #18	ENSOCUG00000005640 #19	RAB25 (ENSOCUG00000005634) #20	LAMTOR2 (ENSOCUG00000027994) #21	UBQLN4 (ENSOCUG00000007156) #22	SSR2 (ENSOCUG00000008455) #23	ARHGEF2 (ENSOCUG00000001937) #24	ENSOCUG00000026819	KHDC4 (ENSOCUG00000010430) #25	RIT1 (ENSOCUG00000006377) #26	SYT11 (ENSOCUG00000027971) #27	ENSOCUG00000026145 #28	ENSOCUG00000010191 #28	MSTO1 (ENSOCUG00000010186) #29	DAP3 (ENSOCUG00000004785) #30	ENSOCUG00000034353	ASH1L (ENSOCUG00000014986) #31	ENSOCUG00000038913 #32	FDPS (ENSOCUG00000033536) #33	PKLR (ENSOCUG00000014969) #34