Boreoeutheria	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Primates	ANCESTRAL SPECIES	7	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.e.b ##37	ENSGT00390000012642 #36	ENSGT00900000141074.f #37
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37	ENSGT00390000008859.b.c
Cercopithecidae	ANCESTRAL SPECIES	22	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37	ENSGT00390000008859.b.c
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37	ENSGT00390000008859.b.c
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.g.a #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00530000064067.h ##33	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37
Macaca	ANCESTRAL SPECIES		ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.g.a #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00390000016256.l.a.a ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f.a #37
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000002390.b #12	ENSGT00390000005131 #11	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.g.a #33	ENSGT00530000064067.g.b #30	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00390000016256.l.a.a ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f.a #37
Rhesus	MODERN SPECIES		RHBG (ENSMMUG00000017965) #7	TSACC (ENSMMUG00000051030) #8	CCT3 (ENSMMUG00000019034) #9	VHLL (ENSMMUG00000064443) #10	GLMP (ENSMMUG00000000092) #11	TMEM79 (ENSMMUG00000047929) #12	SMG5 (ENSMMUG00000000090) #13	PAQR6 (ENSMMUG00000000085) #14	BGLAP (ENSMMUG00000004902) #15	SEMA4A (ENSMMUG00000004901) #16	ENSMMUG00000037731 #17	LMNA (ENSMMUG00000016096) #18	MEX3A (ENSMMUG00000052160) #19	RAB25 (ENSMMUG00000022306) #20	LAMTOR2 (ENSMMUG00000012126) #21	UBQLN4 (ENSMMUG00000009983) #22	SSR2 (ENSMMUG00000013495) #23	ARHGEF2 (ENSMMUG00000005092) #24	RXFP4 (ENSMMUG00000005090) #25	KHDC4 (ENSMMUG00000004648) #26	RIT1 (ENSMMUG00000053454) #27	SYT11 (ENSMMUG00000021312) #28	GON4L (ENSMMUG00000009987) #29	ENSMMUG00000062397 #30	DAP3 (ENSMMUG00000018080) #31	ASH1L (ENSMMUG00000023146) #32	ENSMMUG00000009981 #33	ENSMMUG00000058124 #34	RUSC1 (ENSMMUG00000023145) #35	ENSMMUG00000063807 #36	FDPS (ENSMMUG00000023144) #37
Crab-eating macaque	MODERN SPECIES	19	GPAM (ENSMFAG00000032340)	ENSMFAG00000049620	ENSMFAG00000063286	RBM20 (ENSMFAG00000036795)	SMC3 (ENSMFAG00000003098)	ENSMFAG00000063112	DUSP5 (ENSMFAG00000002031)	ENSMFAG00000065587	ENSMFAG00000059019	ENSMFAG00000002433	MXI1 (ENSMFAG00000030475)	ENSMFAG00000056864	ADD3 (ENSMFAG00000031457)	XPNPEP1 (ENSMFAG00000030034)	ENSMFAG00000051095	ENSMFAG00000031866 #22	ENSMFAG00000055089	ENSMFAG00000011968	ENSMFAG00000058560	ENSMFAG00000058920	ENSMFAG00000056460	SORCS1 (ENSMFAG00000042566)	ENSMFAG00000046202	ENSMFAG00000050436	SORCS3 (ENSMFAG00000044111)	CFAP58 (ENSMFAG00000035977)	ITPRIP (ENSMFAG00000057374)	GSTO2 (ENSMFAG00000050681)	ENSMFAG00000061086	GSTO1 (ENSMFAG00000033599)	CFAP43 (ENSMFAG00000043638)
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	262	TSACC (ENSMNEG00000030389) #8	CCT3 (ENSMNEG00000027103) #9	GLMP (ENSMNEG00000034996) #11	TMEM79 (ENSMNEG00000040540) #12	SMG5 (ENSMNEG00000044425) #13	ENSMNEG00000037204 #14	BGLAP (ENSMNEG00000014728)	PMF1 (ENSMNEG00000030198)	SLC25A44 (ENSMNEG00000032439) #15	ENSMNEG00000041520 #17	SEMA4A (ENSMNEG00000027619) #16	LMNA (ENSMNEG00000045506) #18	MEX3A (ENSMNEG00000031569) #19	RAB25 (ENSMNEG00000004251) #20	LAMTOR2 (ENSMNEG00000044990) #21	UBQLN4 (ENSMNEG00000028661) #22	ENSMNEG00000036868 #23	ARHGEF2 (ENSMNEG00000030024) #24	RXFP4 (ENSMNEG00000025991)	KHDC4 (ENSMNEG00000005131) #26	RIT1 (ENSMNEG00000039545) #27	SYT11 (ENSMNEG00000039442) #28	GON4L (ENSMNEG00000022837) #29	DAP3 (ENSMNEG00000043408) #31	YY1AP1 (ENSMNEG00000038421) ##29	MSTO1 (ENSMNEG00000030351) #33	ASH1L (ENSMNEG00000004882) #32	RUSC1 (ENSMNEG00000037791) #35	ENSMNEG00000034281 #36	ENSMNEG00000041237 #37	PKLR (ENSMNEG00000009109)
Pig-tailed macaque	MODERN SPECIES	90	TECTB (ENSMNEG00000025162)	GPAM (ENSMNEG00000041070)	ENSMNEG00000038669	ADRA2A (ENSMNEG00000006398)	SHOC2 (ENSMNEG00000039245)	BBIP1 (ENSMNEG00000041769)	PDCD4 (ENSMNEG00000043104)	RBM20 (ENSMNEG00000030297)	SMC3 (ENSMNEG00000001042)	DUSP5 (ENSMNEG00000033790)	ENSMNEG00000038014	ENSMNEG00000042963	MXI1 (ENSMNEG00000034671)	ADD3 (ENSMNEG00000028760)	XPNPEP1 (ENSMNEG00000029393)	ENSMNEG00000035210 #22	ENSMNEG00000028414
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.g.a #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00530000064067.h ##33	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37
Cercopithecinae_d	ANCESTRAL SPECIES	33	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.g.a #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29
Sooty mangabey	MODERN SPECIES	226	TSACC (ENSCATG00000032103) #8	CCT3 (ENSCATG00000032970) #9	GLMP (ENSCATG00000032524) #11	TMEM79 (ENSCATG00000041384) #12	SMG5 (ENSCATG00000030539) #13	PAQR6 (ENSCATG00000029286) #14	BGLAP (ENSCATG00000014375)	PMF1 (ENSCATG00000029246)	SLC25A44 (ENSCATG00000039803) #15	ENSCATG00000042076 #17	SEMA4A (ENSCATG00000036260) #16	LMNA (ENSCATG00000033574) #18	MEX3A (ENSCATG00000032390) #19	RAB25 (ENSCATG00000029662) #20	LAMTOR2 (ENSCATG00000030341) #21	UBQLN4 (ENSCATG00000023959) #22	SSR2 (ENSCATG00000030169) #23	ARHGEF2 (ENSCATG00000029542) #24	RXFP4 (ENSCATG00000019172)	KHDC4 (ENSCATG00000034662) #26	RIT1 (ENSCATG00000045033) #27	SYT11 (ENSCATG00000038729) #28	GON4L (ENSCATG00000031497) #29	MSTO1 (ENSCATG00000041352) #33	DAP3 (ENSCATG00000037832) #31	YY1AP1 (ENSCATG00000042138) ##29
Drill	MODERN SPECIES	1097	CCT3 (ENSMLEG00000036583) #9	ENSMLEG00000043471	GLMP (ENSMLEG00000038171) #11	TMEM79 (ENSMLEG00000038027) #12	SMG5 (ENSMLEG00000041192) #13	PAQR6 (ENSMLEG00000038853) #14	BGLAP (ENSMLEG00000039620)	PMF1 (ENSMLEG00000032681)	SLC25A44 (ENSMLEG00000019841) #15	ENSMLEG00000037790 #17	SEMA4A (ENSMLEG00000033397) #16	LMNA (ENSMLEG00000030821) #18	MEX3A (ENSMLEG00000023495) #19	RAB25 (ENSMLEG00000025037) #20	LAMTOR2 (ENSMLEG00000020600) #21	UBQLN4 (ENSMLEG00000036998) #22	SSR2 (ENSMLEG00000038454) #23	ARHGEF2 (ENSMLEG00000038613) #24	RXFP4 (ENSMLEG00000000539)	KHDC4 (ENSMLEG00000036924) #26	RIT1 (ENSMLEG00000030499) #27	SYT11 (ENSMLEG00000034240) #28	GON4L (ENSMLEG00000039636) #29
Olive baboon	MODERN SPECIES		CCT3 (ENSPANG00000026114) #9	ENSPANG00000003881	GLMP (ENSPANG00000018021) #11	TMEM79 (ENSPANG00000011454) #12	SMG5 (ENSPANG00000011201) #13	PAQR6 (ENSPANG00000008734) #14	BGLAP (ENSPANG00000023523)	PMF1 (ENSPANG00000010692)	SLC25A44 (ENSPANG00000008735) #15	ENSPANG00000041668	SEMA4A (ENSPANG00000016075) #16	LMNA (ENSPANG00000003882) #18	MEX3A (ENSPANG00000020303) #19	RAB25 (ENSPANG00000003113) #20	LAMTOR2 (ENSPANG00000032414) #21	UBQLN4 (ENSPANG00000001757) #22	SSR2 (ENSPANG00000005571) #23	ARHGEF2 (ENSPANG00000006851) #24	ENSPANG00000004167 #25	KHDC4 (ENSPANG00000011455) #26	RIT1 (ENSPANG00000035332) #27	SYT11 (ENSPANG00000018152) #28	GON4L (ENSPANG00000011456) #29	DAP3 (ENSPANG00000001758) #31	YY1AP1 (ENSPANG00000029721) ##29	MSTO1 (ENSPANG00000006654) ##33	ASH1L (ENSPANG00000004959) #32	ENSPANG00000045760 #36	RUSC1 (ENSPANG00000006655) #35	FDPS (ENSPANG00000024920) #37	PKLR (ENSPANG00000022417)
Vervet Monkey	MODERN SPECIES	12	RHBG (ENSCSAG00000002135) #7	TSACC (ENSCSAG00000002131) #8	CCT3 (ENSCSAG00000002128) #9	GLMP (ENSCSAG00000002123) #11	TMEM79 (ENSCSAG00000002125) #12	SMG5 (ENSCSAG00000002120) #13	PAQR6 (ENSCSAG00000002117) #14	BGLAP (ENSCSAG00000002112)	PMF1 (ENSCSAG00000002107)	SLC25A44 (ENSCSAG00000002104) #15	SEMA4A (ENSCSAG00000002102) #16	LMNA (ENSCSAG00000002099) #18	MEX3A (ENSCSAG00000002097) #19	RAB25 (ENSCSAG00000002096) #20	LAMTOR2 (ENSCSAG00000002094) #21	UBQLN4 (ENSCSAG00000002093) #22	SSR2 (ENSCSAG00000002090) #23	ARHGEF2 (ENSCSAG00000002088) #24	ENSCSAG00000000059 #25	KHDC4 (ENSCSAG00000002082) #26	RIT1 (ENSCSAG00000002074) #27	SYT11 (ENSCSAG00000002072) #28	GON4L (ENSCSAG00000002060) #29	ENSCSAG00000002038 #33	DAP3 (ENSCSAG00000002035) #31	YY1AP1 (ENSCSAG00000002031) ##29	ASH1L (ENSCSAG00000002027) #32	RUSC1 (ENSCSAG00000002023) #35	ENSCSAG00000002022 #37	PKLR (ENSCSAG00000002021)	HCN3 (ENSCSAG00000002020)
Rhinopithecus	ANCESTRAL SPECIES	59	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b.c #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00390000002944.e.a.a.a.a #17	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.a.a ##29
Black snub-nosed monkey	MODERN SPECIES	1571	TSACC (ENSRBIG00000036225) #8	CCT3 (ENSRBIG00000032821) #9	GLMP (ENSRBIG00000030275) #11	ENSRBIG00000032628 #12	SMG5 (ENSRBIG00000027428) #13	ENSRBIG00000027798 #14	BGLAP (ENSRBIG00000000752)	ENSRBIG00000036011	SLC25A44 (ENSRBIG00000041041) #15	ENSRBIG00000026928 #17	SEMA4A (ENSRBIG00000037159) #16	LMNA (ENSRBIG00000041859) #18	MEX3A (ENSRBIG00000033197) #19	RAB25 (ENSRBIG00000044154) #20	LAMTOR2 (ENSRBIG00000043324) #21	UBQLN4 (ENSRBIG00000033879) #22	SSR2 (ENSRBIG00000039430) #23	ARHGEF2 (ENSRBIG00000035589) #24	RXFP4 (ENSRBIG00000032808)	KHDC4 (ENSRBIG00000013231) #26	ALLC (ENSRBIG00000032207)	DCDC2C (ENSRBIG00000042681)
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1378																ENSRROG00000045601 #22	SSR2 (ENSRROG00000037774) #23	ARHGEF2 (ENSRROG00000032685) #24	RXFP4 (ENSRROG00000013377)	KHDC4 (ENSRROG00000030403) #26	RIT1 (ENSRROG00000035955) #27	SYT11 (ENSRROG00000040729) #28	GON4L (ENSRROG00000002995) #29	MSTO1 (ENSRROG00000039402) #33	DAP3 (ENSRROG00000041228) #31	ENSRROG00000040709 ##29	ENSRROG00000014134 ##29
Golden snub-nosed monkey	MODERN SPECIES	1290					ENSRROG00000041912 #12	SMG5 (ENSRROG00000030035) #13	PAQR6 (ENSRROG00000042038) #14	ENSRROG00000038103	SLC25A44 (ENSRROG00000030201) #15	ENSRROG00000044575 #17	SEMA4A (ENSRROG00000043198) #16	LMNA (ENSRROG00000037915) #18	MEX3A (ENSRROG00000029193) #19	RAB25 (ENSRROG00000028851) #20	LAMTOR2 (ENSRROG00000045270) #21	ENSRROG00000027233 #22
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37	ENSGT00390000008859.b.c
Hominidae	ANCESTRAL SPECIES	6	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37	ENSGT00390000008859.b.c
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.c.a #33	ENSGT00530000064067.c.b #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00530000064067.d #33	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	16	EIF2A (ENSGGOG00000015391)	SERP1 (ENSGGOG00000015388)	TSC22D2 (ENSGGOG00000024379)	ENSGGOG00000007109	RNF13 (ENSGGOG00000007103)	ANKUB1 (ENSGGOG00000011489)	COMMD2 (ENSGGOG00000003255)	WWTR1 (ENSGGOG00000000214)	TM4SF4 (ENSGGOG00000001835)	TM4SF1 (ENSGGOG00000003605)	TM4SF18 (ENSGGOG00000002355)	CP (ENSGGOG00000009531)	HPS3 (ENSGGOG00000016590)	HLTF (ENSGGOG00000001261)	GYG1 (ENSGGOG00000008980)	ENSGGOG00000027497 #22	CPA3 (ENSGGOG00000026314)	CPB1 (ENSGGOG00000005316)	AGTR1 (ENSGGOG00000001326)	ZIC1 (ENSGGOG00000001101)	ZIC4 (ENSGGOG00000042345)	PLSCR5 (ENSGGOG00000027798)	PLSCR1 (ENSGGOG00000010136)	ENSGGOG00000004864	PLSCR4 (ENSGGOG00000006475)	PLOD2 (ENSGGOG00000014284)	ENSGGOG00000042473	ENSGGOG00000026282	ENSGGOG00000042601	DIPK2A (ENSGGOG00000015140)	ENSGGOG00000042026
Gorilla	MODERN SPECIES		RHBG (ENSGGOG00000007638) #7	TSACC (ENSGGOG00000008582) #8	CCT3 (ENSGGOG00000023333) #9	GLMP (ENSGGOG00000014243) #11	TMEM79 (ENSGGOG00000014240) #12	SMG5 (ENSGGOG00000010932) #13	ENSGGOG00000010923 #14	BGLAP (ENSGGOG00000010916)	PMF1 (ENSGGOG00000037793)	SLC25A44 (ENSGGOG00000010910) #15	SEMA4A (ENSGGOG00000000814) #16	LMNA (ENSGGOG00000000813) #18	MEX3A (ENSGGOG00000004513) #19	RAB25 (ENSGGOG00000006821) #20	LAMTOR2 (ENSGGOG00000006818) #21	ENSGGOG00000008916 #22	SSR2 (ENSGGOG00000024769) #23	ARHGEF2 (ENSGGOG00000005907) #24	RXFP4 (ENSGGOG00000034869)	KHDC4 (ENSGGOG00000024568) #26	RIT1 (ENSGGOG00000001461) #27	SYT11 (ENSGGOG00000010111) #28	ENSGGOG00000025183 ##29	GON4L (ENSGGOG00000000477) #29	ENSGGOG00000040593 #33	DAP3 (ENSGGOG00000007618) #31	YY1AP1 (ENSGGOG00000026024) ##29	ENSGGOG00000000475 #33	ASH1L (ENSGGOG00000011218) #32	RUSC1 (ENSGGOG00000000408) #35	ENSGGOG00000039031 #36
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.c.a #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00530000064067.d #33	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37
Pan	ANCESTRAL SPECIES		ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067.c.a #33	ENSGT00390000015248 #31	ENSGT00390000016256.l.b ##29	ENSGT00940000156698 #32	ENSGT00940000155046.t.g.b.b	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.f #37
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES		RHBG (ENSPTRG00000001458) #7	TSACC (ENSPTRG00000001457)	CCT3 (ENSPTRG00000001456) #9	GLMP (ENSPTRG00000001455) #11	TMEM79 (ENSPTRG00000001453) #12	SMG5 (ENSPTRG00000023925) #13	PAQR6 (ENSPTRG00000001451) #14	BGLAP (ENSPTRG00000041553)	PMF1 (ENSPTRG00000001450)	SLC25A44 (ENSPTRG00000001449) #15	SEMA4A (ENSPTRG00000001448) #16	LMNA (ENSPTRG00000001447) #18	MEX3A (ENSPTRG00000030373) #19	RAB25 (ENSPTRG00000001446) #20	LAMTOR2 (ENSPTRG00000001445) #21	UBQLN4 (ENSPTRG00000001444) #22	SSR2 (ENSPTRG00000001442) #23	ARHGEF2 (ENSPTRG00000001441) #24	RXFP4 (ENSPTRG00000001439)	KHDC4 (ENSPTRG00000001438) #26	RIT1 (ENSPTRG00000001437) #27	SYT11 (ENSPTRG00000001436) #28	GON4L (ENSPTRG00000001433) #29	MSTO1 (ENSPTRG00000001428) #33	DAP3 (ENSPTRG00000001430) #31	YY1AP1 (ENSPTRG00000001429) ##29	CLDN6 (ENSPTRG00000045058)	ENSPTRG00000047569	ASH1L (ENSPTRG00000001425) #32	RUSC1 (ENSPTRG00000001424) #35	ENSPTRG00000043354 #36
Chimpanzee	MODERN SPECIES	199															ENSPTRG00000048190 #21	ENSPTRG00000051805 #22
Bonobo	MODERN SPECIES		RHBG (ENSPPAG00000032922) #7	TSACC (ENSPPAG00000040738) #8	CCT3 (ENSPPAG00000042161) #9	GLMP (ENSPPAG00000028749) #11	TMEM79 (ENSPPAG00000042037) #12	SMG5 (ENSPPAG00000011996) #13	ENSPPAG00000027236 #14	BGLAP (ENSPPAG00000042608)	ENSPPAG00000034289	SLC25A44 (ENSPPAG00000027895) #15	SEMA4A (ENSPPAG00000043828) #16	LMNA (ENSPPAG00000037857) #18	MEX3A (ENSPPAG00000016303) #19	RAB25 (ENSPPAG00000031127) #20	LAMTOR2 (ENSPPAG00000037502) #21	UBQLN4 (ENSPPAG00000040262) #22	ENSPPAG00000036187 #23	ARHGEF2 (ENSPPAG00000043187) #24	RXFP4 (ENSPPAG00000011483)	KHDC4 (ENSPPAG00000028145) #26	RIT1 (ENSPPAG00000043026) #27	SYT11 (ENSPPAG00000039359) #28	GON4L (ENSPPAG00000030169) #29	ENSPPAG00000028555 #33	ENSPPAG00000035270	DAP3 (ENSPPAG00000030901) #31	YY1AP1 (ENSPPAG00000041804) ##29	ENSPPAG00000036109	ASH1L (ENSPPAG00000031869) #32	RUSC1 (ENSPPAG00000030052) #35	ENSPPAG00000027399 #36
Human	MODERN SPECIES		CCT3 (ENSG00000163468) #9	VHLL (ENSG00000189030) #10	GLMP (ENSG00000198715) #11	TMEM79 (ENSG00000163472) #12	SMG5 (ENSG00000198952) #13	PAQR6 (ENSG00000160781) #14	BGLAP (ENSG00000242252)	PMF1 (ENSG00000160783)	PMF1-BGLAP (ENSG00000260238)	SLC25A44 (ENSG00000160785) #15	SEMA4A (ENSG00000196189) #16	LMNA (ENSG00000160789) #18	MEX3A (ENSG00000254726) #19	RAB25 (ENSG00000132698) #20	LAMTOR2 (ENSG00000116586) #21	UBQLN4 (ENSG00000160803) #22	SSR2 (ENSG00000163479) #23	ARHGEF2 (ENSG00000116584) #24	RXFP4 (ENSG00000173080)	KHDC4 (ENSG00000132680) #26	RIT1 (ENSG00000143622) #27	SYT11 (ENSG00000132718) #28	GON4L (ENSG00000116580) #29	DAP3 (ENSG00000132676) #31	YY1AP1 (ENSG00000163374) ##29	MSTO1 (ENSG00000125459) #33	ASH1L (ENSG00000116539) #32	RUSC1 (ENSG00000160753) #35	FDPS (ENSG00000160752) #37	PKLR (ENSG00000143627)	HCN3 (ENSG00000143630)
Orangutan	MODERN SPECIES		ENSPPYG00000000717	RHBG (ENSPPYG00000000718) #7	ENSPPYG00000031428 #8	CCT3 (ENSPPYG00000010639) #9	GLMP (ENSPPYG00000000721) #11	TMEM79 (ENSPPYG00000000722) #12	SMG5 (ENSPPYG00000000723) #13	PAQR6 (ENSPPYG00000000724) #14	ENSPPYG00000000725	SLC25A44 (ENSPPYG00000000726) #15	SEMA4A (ENSPPYG00000000727) #16	LMNA (ENSPPYG00000000728) #18	MEX3A (ENSPPYG00000000729) #19	RAB25 (ENSPPYG00000000730) #20	LAMTOR2 (ENSPPYG00000000731) #21	UBQLN4 (ENSPPYG00000000732) #22	SSR2 (ENSPPYG00000000733) #23	ARHGEF2 (ENSPPYG00000000734) #24	RXFP4 (ENSPPYG00000000735)	KHDC4 (ENSPPYG00000000736) #26	RIT1 (ENSPPYG00000000737) #27	SYT11 (ENSPPYG00000039531) #28	GON4L (ENSPPYG00000000739) #29	MSTO2P (ENSPPYG00000010648)	MSTO1 (ENSPPYG00000000740) #33	DAP3 (ENSPPYG00000000742) #31	YY1AP1 (ENSPPYG00000000743) ##29	ASH1L (ENSPPYG00000000744) #32	ENSPPYG00000033728	RUSC1 (ENSPPYG00000000745) #35	ENSPPYG00000000746 #36
Platyrrhini	ANCESTRAL SPECIES	12	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.e.b.b.b ##37	ENSGT00390000012642 #36	ENSGT00900000141074.e.b.b.a.a.a ##37
Cebidae	ANCESTRAL SPECIES	12	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.e.b.b.b ##37	ENSGT00390000012642 #36	ENSGT00900000141074.e.b.b.a.a.a ##37
Cebidae_a	ANCESTRAL SPECIES	6	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT01010000224083	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.k #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00390000016256.l ##29	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074.e.b.b.a.a.a ##37	ENSGT00390000008859.b.c
Capuchin	MODERN SPECIES	427	TSACC (ENSCCAG00000022149) #8	CCT3 (ENSCCAG00000033998) #9	ENSCCAG00000011652	GLMP (ENSCCAG00000034620) #11	TMEM79 (ENSCCAG00000028389) #12	SMG5 (ENSCCAG00000027409) #13	PAQR6 (ENSCCAG00000027826) #14	BGLAP (ENSCCAG00000020525)	PMF1 (ENSCCAG00000025850)	SLC25A44 (ENSCCAG00000026588) #15	SEMA4A (ENSCCAG00000032806) #16	LMNA (ENSCCAG00000023432) #18	MEX3A (ENSCCAG00000022351) #19	RAB25 (ENSCCAG00000021873) #20	LAMTOR2 (ENSCCAG00000026308) #21	UBQLN4 (ENSCCAG00000036689) #22	ENSCCAG00000029510	SSR2 (ENSCCAG00000037436) #23	ARHGEF2 (ENSCCAG00000029636) #24	KHDC4 (ENSCCAG00000023017) #26	RIT1 (ENSCCAG00000037656) #27	SYT11 (ENSCCAG00000016634) #28	GON4L (ENSCCAG00000037108) #29	MSTO1 (ENSCCAG00000035498) #33	DAP3 (ENSCCAG00000033532) #31	YY1AP1 (ENSCCAG00000026983) ##29
Bolivian squirrel monkey	MODERN SPECIES	136	RHBG (ENSSBOG00000035568) #7	TSACC (ENSSBOG00000020015) #8	CCT3 (ENSSBOG00000035044) #9	GLMP (ENSSBOG00000020411) #11	TMEM79 (ENSSBOG00000021483) #12	SMG5 (ENSSBOG00000033339) #13	PAQR6 (ENSSBOG00000036021) #14	BGLAP (ENSSBOG00000026047)	PMF1 (ENSSBOG00000034025)	SLC25A44 (ENSSBOG00000020325) #15	SEMA4A (ENSSBOG00000019443) #16	LMNA (ENSSBOG00000014857) #18	MEX3A (ENSSBOG00000025317) #19	RAB25 (ENSSBOG00000032212) #20	LAMTOR2 (ENSSBOG00000035732) #21	UBQLN4 (ENSSBOG00000021728) #22	SSR2 (ENSSBOG00000020706) #23	ARHGEF2 (ENSSBOG00000034006) #24	RXFP4 (ENSSBOG00000034710)	KHDC4 (ENSSBOG00000034469) #26	RIT1 (ENSSBOG00000023350) #27	SYT11 (ENSSBOG00000035584) #28	GON4L (ENSSBOG00000032520) #29	MSTO1 (ENSSBOG00000023864) #33	DAP3 (ENSSBOG00000033972) #31	YY1AP1 (ENSSBOG00000029484) ##29	ASH1L (ENSSBOG00000026764) #32	RUSC1 (ENSSBOG00000020883) #35	ENSSBOG00000036252 #36	ENSSBOG00000020002 ##37	PKLR (ENSSBOG00000030303)
Marmoset	MODERN SPECIES	9	RHBG (ENSCJAG00000005838) #7	TSACC (ENSCJAG00000005831) #8	ENSCJAG00000005776 #9	GLMP (ENSCJAG00000005757) #11	TMEM79 (ENSCJAG00000005765) #12	SMG5 (ENSCJAG00000005684) #13	PAQR6 (ENSCJAG00000005656) #14	BGLAP (ENSCJAG00000046802)	ENSCJAG00000005636	SLC25A44 (ENSCJAG00000005625) #15	SEMA4A (ENSCJAG00000005605) #16	LMNA (ENSCJAG00000005413) #18	MEX3A (ENSCJAG00000007711) #19	RAB25 (ENSCJAG00000007715) #20	LAMTOR2 (ENSCJAG00000007739) #21	UBQLN4 (ENSCJAG00000007755) #22	SSR2 (ENSCJAG00000046590) #23	ARHGEF2 (ENSCJAG00000007846) #24	ENSCJAG00000007878 #25	KHDC4 (ENSCJAG00000007881) #26	RIT1 (ENSCJAG00000061243) #27	ENSCJAG00000032919	SYT11 (ENSCJAG00000043885) #28	GON4L (ENSCJAG00000007977) #29	ENSCJAG00000063148 #33	DAP3 (ENSCJAG00000008125) #31	YY1AP1 (ENSCJAG00000042285) ##29	MSTO1 (ENSCJAG00000008092) #33	ENSCJAG00000081873	ASH1L (ENSCJAG00000008157) #32	RUSC1 (ENSCJAG00000008263) #35
Mas night monkey	MODERN SPECIES	1180	TSACC (ENSANAG00000036292) #8	CCT3 (ENSANAG00000036513) #9	ENSANAG00000026737	GLMP (ENSANAG00000020224) #11	TMEM79 (ENSANAG00000028444) #12	SMG5 (ENSANAG00000032899) #13	PAQR6 (ENSANAG00000023514) #14	BGLAP (ENSANAG00000034859)	ENSANAG00000028929	SLC25A44 (ENSANAG00000033058) #15	SEMA4A (ENSANAG00000032935) #16	LMNA (ENSANAG00000028703) #18	MEX3A (ENSANAG00000032597) #19	RAB25 (ENSANAG00000036045) #20	LAMTOR2 (ENSANAG00000036124) #21	UBQLN4 (ENSANAG00000031889) #22	SSR2 (ENSANAG00000024178) #23	ARHGEF2 (ENSANAG00000038394) #24	ENSANAG00000034289 #26	RIT1 (ENSANAG00000033671) #27	SYT11 (ENSANAG00000020380) #28	ENSANAG00000006710	GON4L (ENSANAG00000036572) #29	ENSANAG00000026598	ENSANAG00000035773 #33	DAP3 (ENSANAG00000033995) #31	YY1AP1 (ENSANAG00000022356) ##29	ENSANAG00000024232	ENSANAG00000028010 #33	ASH1L (ENSANAG00000019337) #32	RUSC1 (ENSANAG00000027974) #35
Tarsier	MODERN SPECIES	1540															LAMTOR2 (ENSTSYG00000028246) #21	UBQLN4 (ENSTSYG00000011830) #22
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Lemuriformes	ANCESTRAL SPECIES	11	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Mouse lemur	MODERN SPECIES	11	TSACC (ENSMICG00000002266) #8	ENSMICG00000030201 #9	ENSMICG00000038362	GLMP (ENSMICG00000002263) #11	TMEM79 (ENSMICG00000002260) #12	SMG5 (ENSMICG00000002257) #13	PAQR6 (ENSMICG00000002252) #14	BGLAP (ENSMICG00000045135)	ENSMICG00000002248	SLC25A44 (ENSMICG00000047168) #15	SEMA4A (ENSMICG00000002242) #16	LMNA (ENSMICG00000002236) #18	MEX3A (ENSMICG00000046214) #19	RAB25 (ENSMICG00000002230) #20	LAMTOR2 (ENSMICG00000002227) #21	UBQLN4 (ENSMICG00000002222) #22	ENSMICG00000038131 #23	ENSMICG00000030729	ARHGEF2 (ENSMICG00000002212) #24	KHDC4 (ENSMICG00000002202) #26	RIT1 (ENSMICG00000044667) #27	SYT11 (ENSMICG00000038586) #28	ENSMICG00000002183 #29	MSTO1 (ENSMICG00000028414) #33	DAP3 (ENSMICG00000031947) #31	ASH1L (ENSMICG00000007490) #32	RUSC1 (ENSMICG00000029028) #35	ENSMICG00000007468 #37	PKLR (ENSMICG00000007458)	HCN3 (ENSMICG00000030454)	CLK2 (ENSMICG00000007436)
Lemuriformes_a	ANCESTRAL SPECIES	19	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Coquerels sifaka	MODERN SPECIES	750	RHBG (ENSPCOG00000010688) #7	TSACC (ENSPCOG00000018038) #8	CCT3 (ENSPCOG00000027102) #9	GLMP (ENSPCOG00000027438) #11	TMEM79 (ENSPCOG00000027811) #12	SMG5 (ENSPCOG00000004741) #13	PAQR6 (ENSPCOG00000024324) #14	BGLAP (ENSPCOG00000020241)	ENSPCOG00000022530	SLC25A44 (ENSPCOG00000017429) #15	SEMA4A (ENSPCOG00000021582) #16	ENSPCOG00000028240 #18	MEX3A (ENSPCOG00000019307) #19	RAB25 (ENSPCOG00000005144) #20	LAMTOR2 (ENSPCOG00000023468) #21	UBQLN4 (ENSPCOG00000017664) #22	SSR2 (ENSPCOG00000022217) #23	ENSPCOG00000019355	ARHGEF2 (ENSPCOG00000016528) #24	KHDC4 (ENSPCOG00000027660) #26	RIT1 (ENSPCOG00000027211) #27	SYT11 (ENSPCOG00000017038) #28	ENSPCOG00000024149 #29	MSTO1 (ENSPCOG00000017579) #33	DAP3 (ENSPCOG00000027412) #31	ASH1L (ENSPCOG00000017924) #32	RUSC1 (ENSPCOG00000025947) #35	ENSPCOG00000022505 #37	PKLR (ENSPCOG00000028225)	HCN3 (ENSPCOG00000021822)	CLK2 (ENSPCOG00000027461)
Greater bamboo lemur	MODERN SPECIES	1411													MEX3A (ENSPSMG00000005991) #19	RAB25 (ENSPSMG00000006001) #20	LAMTOR2 (ENSPSMG00000006010) #21	UBQLN4 (ENSPSMG00000006027) #22	SSR2 (ENSPSMG00000006059) #23	ARHGEF2 (ENSPSMG00000006180) #24	RXFP4 (ENSPSMG00000006340)	KHDC4 (ENSPSMG00000006345) #26
Bushbaby	MODERN SPECIES	206	RHBG (ENSOGAG00000006682) #7	TSACC (ENSOGAG00000031578) #8	CCT3 (ENSOGAG00000008967) #9	GLMP (ENSOGAG00000030120) #11	TMEM79 (ENSOGAG00000012912) #12	SMG5 (ENSOGAG00000004966) #13	PAQR6 (ENSOGAG00000031893) #14	BGLAP (ENSOGAG00000025659)	PMF1 (ENSOGAG00000004964)	ENSOGAG00000034650 #15	SEMA4A (ENSOGAG00000025069) #16	LMNA (ENSOGAG00000016961) #18	MEX3A (ENSOGAG00000029891) #19	RAB25 (ENSOGAG00000016955) #20	LAMTOR2 (ENSOGAG00000016953) #21	UBQLN4 (ENSOGAG00000016948) #22	SSR2 (ENSOGAG00000016945) #23	ARHGEF2 (ENSOGAG00000011581) #24	ENSOGAG00000026040 #25	KHDC4 (ENSOGAG00000002261) #26	ENSOGAG00000002260 #27	SYT11 (ENSOGAG00000002258) #28	ENSOGAG00000000849 #29	MSTO1 (ENSOGAG00000031236) #33	DAP3 (ENSOGAG00000000845) #31	ASH1L (ENSOGAG00000009609) #32	RUSC1 (ENSOGAG00000025498) #35	PKLR (ENSOGAG00000028418)	HCN3 (ENSOGAG00000009594)	CLK2 (ENSOGAG00000009589)	SCAMP3 (ENSOGAG00000009585)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00390000012642 #36	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Tree shrew	MODERN SPECIES	3906													LMNA (ENSTBEG00000005069) #18	RAB25 (ENSTBEG00000004142) #20	LAMTOR2 (ENSTBEG00000003768) #21	UBQLN4 (ENSTBEG00000003066) #22	SSR2 (ENSTBEG00000002867) #23	ARHGEF2 (ENSTBEG00000001641) #24	RXFP4 (ENSTBEG00000001002)
Glires	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01090000260051.b.b #25	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Pika	MODERN SPECIES	3341										SLC25A44 (ENSOPRG00000003022) #15	SEMA4A (ENSOPRG00000002992) #16	LMNA (ENSOPRG00000002966) #18	MEX3A (ENSOPRG00000002937) #19	RAB25 (ENSOPRG00000002894) #20	LAMTOR2 (ENSOPRG00000002877) #21	UBQLN4 (ENSOPRG00000002851) #22	SSR2 (ENSOPRG00000002830) #23	ARHGEF2 (ENSOPRG00000002782) #24
Rabbit	MODERN SPECIES	4	MEF2D (ENSOCUG00000012173)	RHBG (ENSOCUG00000016130) #7	TSACC (ENSOCUG00000029754) #8	CCT3 (ENSOCUG00000000137) #9	GLMP (ENSOCUG00000026609) #11	ENSOCUG00000012899 #12	SMG5 (ENSOCUG00000012886) #13	BGLAP (ENSOCUG00000025958)	PMF1 (ENSOCUG00000012870)	SLC25A44 (ENSOCUG00000012861) #15	SEMA4A (ENSOCUG00000001326) #16	LMNA (ENSOCUG00000010011) #18	ENSOCUG00000005640 #19	RAB25 (ENSOCUG00000005634) #20	LAMTOR2 (ENSOCUG00000027994) #21	UBQLN4 (ENSOCUG00000007156) #22	SSR2 (ENSOCUG00000008455) #23	ARHGEF2 (ENSOCUG00000001937) #24	ENSOCUG00000026819 #25	KHDC4 (ENSOCUG00000010430) #26	RIT1 (ENSOCUG00000006377) #27	SYT11 (ENSOCUG00000027971) #28	ENSOCUG00000026145 #29	ENSOCUG00000010191 #29	MSTO1 (ENSOCUG00000010186) #33	DAP3 (ENSOCUG00000004785) #31	ENSOCUG00000034353	ASH1L (ENSOCUG00000014986) #32	ENSOCUG00000038913 #35	FDPS (ENSOCUG00000033536) #37	PKLR (ENSOCUG00000014969)
Rodentia	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00940000159463	ENSGT00950000182844.b.b.a #7	ENSGT00570000079224.z.a #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Hystricomorpha_a	ANCESTRAL SPECIES	54	ENSGT00940000159463	ENSGT00950000182844.b.b.a #7	ENSGT00570000079224.y #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Hystricomorpha_b	ANCESTRAL SPECIES	61	ENSGT00940000159463	ENSGT00950000182844.b.b.a #7	ENSGT00570000079224.z.a #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Degu	MODERN SPECIES	73	MEF2D (ENSODEG00000010190)	RHBG (ENSODEG00000009136) #7	ENSODEG00000009974 #9	GLMP (ENSODEG00000009800) #11	TMEM79 (ENSODEG00000012508) #12	SMG5 (ENSODEG00000012237) #13	PAQR6 (ENSODEG00000010747) #14	BGLAP (ENSODEG00000010926)	PMF1 (ENSODEG00000011902)	SLC25A44 (ENSODEG00000009774) #15	SEMA4A (ENSODEG00000009359) #16	LMNA (ENSODEG00000009369) #18	MEX3A (ENSODEG00000009643) #19	RAB25 (ENSODEG00000009908) #20	LAMTOR2 (ENSODEG00000010141) #21	UBQLN4 (ENSODEG00000010901) #22	SSR2 (ENSODEG00000010659) #23	ARHGEF2 (ENSODEG00000011373) #24	ENSODEG00000019992 #25	ENSODEG00000009528 #26	RIT1 (ENSODEG00000010128) #27	SYT11 (ENSODEG00000010870) #28	ENSODEG00000011008 #29	ENSODEG00000010737	MSTO1 (ENSODEG00000011191) #33	DAP3 (ENSODEG00000010674) #31	ASH1L (ENSODEG00000009920) #32	ENSODEG00000010812 #35	FDPS (ENSODEG00000010515) #37	PKLR (ENSODEG00000011272)	HCN3 (ENSODEG00000009743)
Long-tailed chinchilla	MODERN SPECIES	252	MEF2D (ENSCLAG00000004702)	RHBG (ENSCLAG00000004625) #7	ENSCLAG00000004359 #9	GLMP (ENSCLAG00000004192) #11	TMEM79 (ENSCLAG00000004142) #12	SMG5 (ENSCLAG00000003983) #13	PAQR6 (ENSCLAG00000003899) #14	BGLAP (ENSCLAG00000003710)	PMF1 (ENSCLAG00000003672)	SLC25A44 (ENSCLAG00000005587) #15	SEMA4A (ENSCLAG00000005297) #16	LMNA (ENSCLAG00000003894) #18	MEX3A (ENSCLAG00000003842) #19	RAB25 (ENSCLAG00000003784) #20	LAMTOR2 (ENSCLAG00000003700) #21	UBQLN4 (ENSCLAG00000003519) #22	SSR2 (ENSCLAG00000003363) #23	ARHGEF2 (ENSCLAG00000013596) #24	KHDC4 (ENSCLAG00000010544) #26	RIT1 (ENSCLAG00000013305) #27	SYT11 (ENSCLAG00000013172) #28	ENSCLAG00000006556 #29	MSTO1 (ENSCLAG00000006273) #33	DAP3 (ENSCLAG00000005599) #31	ASH1L (ENSCLAG00000004536) #32	RUSC1 (ENSCLAG00000005579) #35	FDPS (ENSCLAG00000005410) #37	PKLR (ENSCLAG00000005136)	HCN3 (ENSCLAG00000005021)	CLK2 (ENSCLAG00000003873)	SCAMP3 (ENSCLAG00000003649)
Guinea pig	MODERN SPECIES	10	MEF2D (ENSCPOG00000036656)	RHBG (ENSCPOG00000011135) #7	CCT3 (ENSCPOG00000009131) #9	GLMP (ENSCPOG00000032634) #11	TMEM79 (ENSCPOG00000033881) #12	SMG5 (ENSCPOG00000015696) #13	PAQR6 (ENSCPOG00000019726) #14	BGLAP (ENSCPOG00000040505)	PMF1 (ENSCPOG00000015695)	SLC25A44 (ENSCPOG00000021129) #15	SEMA4A (ENSCPOG00000015694) #16	LMNA (ENSCPOG00000023214) #18	MEX3A (ENSCPOG00000020219) #19	RAB25 (ENSCPOG00000002472) #20	LAMTOR2 (ENSCPOG00000032238) #21	UBQLN4 (ENSCPOG00000002467) #22	SSR2 (ENSCPOG00000023729) #23	ARHGEF2 (ENSCPOG00000025396) #24	ENSCPOG00000032356	KHDC4 (ENSCPOG00000004870) #26	RIT1 (ENSCPOG00000004868) #27	SYT11 (ENSCPOG00000004866) #28	ENSCPOG00000004859 #29	MSTO1 (ENSCPOG00000004857) #33	DAP3 (ENSCPOG00000030924) #31	ASH1L (ENSCPOG00000004801) #32	RUSC1 (ENSCPOG00000032934) #35	FDPS (ENSCPOG00000015363) #37	PKLR (ENSCPOG00000011202)	HCN3 (ENSCPOG00000027026)	CLK2 (ENSCPOG00000003176)
Naked mole-rat female	MODERN SPECIES	10	IQGAP3 (ENSHGLG00000018362)	MEF2D (ENSHGLG00000019055)	RHBG (ENSHGLG00000005998) #7	ENSHGLG00000003153 #9	GLMP (ENSHGLG00000041332) #11	TMEM79 (ENSHGLG00000018185) #12	SMG5 (ENSHGLG00000019152) #13	PAQR6 (ENSHGLG00000015640) #14	ENSHGLG00000007944	SLC25A44 (ENSHGLG00000042222) #15	SEMA4A (ENSHGLG00000003587) #16	ENSHGLG00000036594 #18	MEX3A (ENSHGLG00000041429) #19	RAB25 (ENSHGLG00000005517) #20	LAMTOR2 (ENSHGLG00000036352) #21	UBQLN4 (ENSHGLG00000003684) #22	SSR2 (ENSHGLG00000035940) #23	RXFP4 (ENSHGLG00000037004)	KHDC4 (ENSHGLG00000010495) #26	ENSHGLG00000034706 #27	SYT11 (ENSHGLG00000032288) #28	ENSHGLG00000006556 #29	MSTO1 (ENSHGLG00000018369) #33	DAP3 (ENSHGLG00000013978) #31	ASH1L (ENSHGLG00000008090) #32	ENSHGLG00000049863	ENSHGLG00000006300 #35	ENSHGLG00000005618 #37
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132.e #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Eurasian red squirrel	MODERN SPECIES		RHBG (ENSSVLG00005001146) #7	TSACC (ENSSVLG00005001124) #8	CCT3 (ENSSVLG00005001076) #9	GLMP (ENSSVLG00005001024) #11	ENSSVLG00005000998	SMG5 (ENSSVLG00005000972) #13	PAQR6 (ENSSVLG00005000936) #14	BGLAP (ENSSVLG00005000913)	PMF1 (ENSSVLG00005000891)	SLC25A44 (ENSSVLG00005000872) #15	SEMA4A (ENSSVLG00005000802) #16	LMNA (ENSSVLG00005000714) #18	MEX3A (ENSSVLG00005000673) #19	RAB25 (ENSSVLG00005000653) #20	LAMTOR2 (ENSSVLG00005000628) #21	UBQLN4 (ENSSVLG00005000591) #22	SSR2 (ENSSVLG00005000552) #23	ARHGEF2 (ENSSVLG00005000357) #24	RXFP4 (ENSSVLG00005000258)	KHDC4 (ENSSVLG00005000224) #26	ENSSVLG00005000188 #27	ENSSVLG00005000171 #28	ENSSVLG00005000147 #29	MSTO1 (ENSSVLG00005000136) #33	ENSSVLG00005000118 #32	RUSC1 (ENSSVLG00005000107) #35	FDPS (ENSSVLG00005000103) #37	PKLR (ENSSVLG00005000101)	HCN3 (ENSSVLG00005000099)	CLK2 (ENSSVLG00005019777)	SCAMP3 (ENSSVLG00005019647)
Marmotini	ANCESTRAL SPECIES	33	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132.e #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Marmotini_b	ANCESTRAL SPECIES	37	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132.e #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Arctic ground squirrel	MODERN SPECIES	309	RHBG (ENSUPAG00010004243) #7	TSACC (ENSUPAG00010004234) #8	CCT3 (ENSUPAG00010004189) #9	GLMP (ENSUPAG00010004142) #11	TMEM79 (ENSUPAG00010004129) #12	SMG5 (ENSUPAG00010004091) #13	ENSUPAG00010004061 #14	BGLAP (ENSUPAG00010004045)	PMF1 (ENSUPAG00010004034)	SLC25A44 (ENSUPAG00010004013) #15	SEMA4A (ENSUPAG00010003712) #16	LMNA (ENSUPAG00010003669) #18	MEX3A (ENSUPAG00010003653) #19	RAB25 (ENSUPAG00010003640) #20	LAMTOR2 (ENSUPAG00010003634) #21	UBQLN4 (ENSUPAG00010003613) #22	SSR2 (ENSUPAG00010003598) #23	ARHGEF2 (ENSUPAG00010003114) #24	ENSUPAG00010003101 #25	KHDC4 (ENSUPAG00010003067) #26	ENSUPAG00010003055 #27	SYT11 (ENSUPAG00010003045) #28	ENSUPAG00010002975 #29	MSTO1 (ENSUPAG00010002943) #33	ENSUPAG00010002886 #31	ASH1L (ENSUPAG00010002818) #32	RUSC1 (ENSUPAG00010002787) #35	FDPS (ENSUPAG00010002775) #37	PKLR (ENSUPAG00010002743)	HCN3 (ENSUPAG00010002732)	CLK2 (ENSUPAG00010002672)
Squirrel	MODERN SPECIES	180	TSACC (ENSSTOG00000001810) #8	CCT3 (ENSSTOG00000001798) #9	GLMP (ENSSTOG00000015763) #11	TMEM79 (ENSSTOG00000026140) #12	SMG5 (ENSSTOG00000001780) #13	PAQR6 (ENSSTOG00000001772) #14	BGLAP (ENSSTOG00000027908)	ENSSTOG00000034466	PMF1 (ENSSTOG00000001768)	SLC25A44 (ENSSTOG00000001764) #15	SEMA4A (ENSSTOG00000028050) #16	LMNA (ENSSTOG00000001758) #18	MEX3A (ENSSTOG00000024275) #19	RAB25 (ENSSTOG00000000634) #20	LAMTOR2 (ENSSTOG00000023389) #21	UBQLN4 (ENSSTOG00000020043) #22	SSR2 (ENSSTOG00000028971) #23	ARHGEF2 (ENSSTOG00000000620) #24	RXFP4 (ENSSTOG00000000616)	KHDC4 (ENSSTOG00000004732) #26	RIT1 (ENSSTOG00000021028) #27	SYT11 (ENSSTOG00000004720) #28	ENSSTOG00000004664 #29	MSTO1 (ENSSTOG00000004655) #33	DAP3 (ENSSTOG00000004627) #31	ASH1L (ENSSTOG00000019952) #32	RUSC1 (ENSSTOG00000004516) #35	ENSSTOG00000004475 #37	PKLR (ENSSTOG00000022480)	HCN3 (ENSSTOG00000008989)	CLK2 (ENSSTOG00000008974)
Alpin marmot	MODERN SPECIES	85	RHBG (ENSMMMG00000013553) #7	TSACC (ENSMMMG00000013564) #8	CCT3 (ENSMMMG00000013571) #9	GLMP (ENSMMMG00000013644) #11	TMEM79 (ENSMMMG00000013693) #12	SMG5 (ENSMMMG00000013706) #13	PAQR6 (ENSMMMG00000013724) #14	BGLAP (ENSMMMG00000013734)	ENSMMMG00000013758	SLC25A44 (ENSMMMG00000013773) #15	SEMA4A (ENSMMMG00000013785) #16	LMNA (ENSMMMG00000013831) #18	MEX3A (ENSMMMG00000013855) #19	RAB25 (ENSMMMG00000013857) #20	LAMTOR2 (ENSMMMG00000013864) #21	UBQLN4 (ENSMMMG00000013874) #22	SSR2 (ENSMMMG00000013889) #23	ARHGEF2 (ENSMMMG00000013899) #24	RXFP4 (ENSMMMG00000014101)	KHDC4 (ENSMMMG00000014104) #26	ENSMMMG00000014145 #27	SYT11 (ENSMMMG00000014151) #28	ENSMMMG00000014163 #29	MSTO1 (ENSMMMG00000014213) #33	DAP3 (ENSMMMG00000014245) #31	ASH1L (ENSMMMG00000014324) #32	ENSMMMG00000014387 #35	FDPS (ENSMMMG00000014395) #37	PKLR (ENSMMMG00000014412)	HCN3 (ENSMMMG00000014457)	CLK2 (ENSMMMG00000014477)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Kangaroo rat	MODERN SPECIES	345											Sema4a (ENSDORG00000008821) #16	Lmna (ENSDORG00000002470) #18	Mex3a (ENSDORG00000002921) #19	Rab25 (ENSDORG00000002922) #20	Lamtor2 (ENSDORG00000002923) #21	Ubqln4 (ENSDORG00000010538) #22	ENSDORG00000010536 #23	Arhgef2 (ENSDORG00000012162) #24	Khdc4 (ENSDORG00000014602) #26	Rit1 (ENSDORG00000014601) #27	Syt11 (ENSDORG00000023709) #28	Gon4l (ENSDORG00000003598) #29	Msto1 (ENSDORG00000029541) #33	Dap3 (ENSDORG00000003596) #31	Ash1l (ENSDORG00000025575) #32	ENSDORG00000025813 #35	ENSDORG00000024404 #35	Fdps (ENSDORG00000005366) #37	ENSDORG00000028002	Pklr (ENSDORG00000011632)	ENSDORG00000011629
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Lesser Egyptian jerboa	MODERN SPECIES	141	Mef2d (ENSJJAG00000011790)	ENSJJAG00000017067	Cct3 (ENSJJAG00000013939) #9	ENSJJAG00000019201	Tmem79 (ENSJJAG00000023610) #12	Smg5 (ENSJJAG00000022763) #13	Paqr6 (ENSJJAG00000001367) #14	ENSJJAG00000000652	Pmf1 (ENSJJAG00000013470)	Slc25a44 (ENSJJAG00000001462) #15	Sema4a (ENSJJAG00000016229) #16	Lmna (ENSJJAG00000019904) #18	Mex3a (ENSJJAG00000020484) #19	Rab25 (ENSJJAG00000021013) #20	ENSJJAG00000021135 #21	Ubqln4 (ENSJJAG00000002118) #22	Ssr2 (ENSJJAG00000024209) #23	ENSJJAG00000016067 #24	ENSJJAG00000017646 #24	Rxfp4 (ENSJJAG00000013686)	ENSJJAG00000020627 #26	Rit1 (ENSJJAG00000023411) #27	ENSJJAG00000010636 #28	ENSJJAG00000013614 #29	Msto1 (ENSJJAG00000019140) #33	Dap3 (ENSJJAG00000010235) #31	Ash1l (ENSJJAG00000017942) #32	Rusc1 (ENSJJAG00000001429) #35	Pklr (ENSJJAG00000019099)	Hcn3 (ENSJJAG00000017693)	Clk2 (ENSJJAG00000020860)
Muroidea	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224.x #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224.x #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Golden Hamster	MODERN SPECIES	714	Iqgap3 (ENSMAUG00000008455)	Mef2d (ENSMAUG00000016452)	Rhbg (ENSMAUG00000009341) #7	Tsacc (ENSMAUG00000016723) #8	ENSMAUG00000014449 #9	Tmem79 (ENSMAUG00000014791) #12	Smg5 (ENSMAUG00000010381) #13	Paqr6 (ENSMAUG00000010297) #14	ENSMAUG00000015288	Pmf1 (ENSMAUG00000019629)	Slc25a44 (ENSMAUG00000021047) #15	ENSMAUG00000017061 #16	Lmna (ENSMAUG00000012838) #18	Mex3a (ENSMAUG00000012601) #19	Lamtor2 (ENSMAUG00000000547) #21	Ubqln4 (ENSMAUG00000007686) #22	Ssr2 (ENSMAUG00000021161) #23	ENSMAUG00000019940 #24	ENSMAUG00000013645 #24	Khdc4 (ENSMAUG00000019676) #26	Rit1 (ENSMAUG00000000572) #27	ENSMAUG00000013419 #28	ENSMAUG00000000631 #29	Msto1 (ENSMAUG00000020345) #33	Ash1l (ENSMAUG00000000702) #32	ENSMAUG00000017088 #35	Fdps (ENSMAUG00000020872) #37	Pklr (ENSMAUG00000012808)	Hcn3 (ENSMAUG00000017469)	Clk2 (ENSMAUG00000016789)	Scamp3 (ENSMAUG00000010273)
Chinese hamster chok1gshd	MODERN SPECIES	352	Rhbg (ENSCGRG00001000730) #7	Tsacc (ENSCGRG00001019825) #8	Cct3 (ENSCGRG00001015935) #9	Glmp (ENSCGRG00001007094) #11	Tmem79 (ENSCGRG00001024551) #12	Smg5 (ENSCGRG00001006336) #13	Paqr6 (ENSCGRG00001016796) #14	ENSCGRG00001014532	Pmf1 (ENSCGRG00001010918)	Slc25a44 (ENSCGRG00001021651) #15	Sema4a (ENSCGRG00001020918) #16	Lmna (ENSCGRG00001003129) #18	Mex3a (ENSCGRG00001000412) #19	Rab25 (ENSCGRG00001017341) #20	Lamtor2 (ENSCGRG00001008748) #21	Ubqln4 (ENSCGRG00001019653) #22	Ssr2 (ENSCGRG00001006822) #23	Arhgef2 (ENSCGRG00001006987) #24	Rxfp4 (ENSCGRG00001002374)	Khdc4 (ENSCGRG00001012564) #26	Rit1 (ENSCGRG00001004542) #27	Syt11 (ENSCGRG00001023824) #28	Gon4l (ENSCGRG00001023253) #29	Msto1 (ENSCGRG00001015681) #33	Dap3 (ENSCGRG00001022521) #31	Ash1l (ENSCGRG00001011192) #32	Rusc1 (ENSCGRG00001009459) #35	Fdps (ENSCGRG00001025003) #37	ENSCGRG00001023534	Pklr (ENSCGRG00001023372)	Hcn3 (ENSCGRG00001011318)
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224.x #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	8	ENSMOCG00000022002	Tsacc (ENSMOCG00000013419) #8	Cct3 (ENSMOCG00000010144) #9	Glmp (ENSMOCG00000009096) #11	Tmem79 (ENSMOCG00000017414) #12	Smg5 (ENSMOCG00000016590) #13	Paqr6 (ENSMOCG00000006437) #14	ENSMOCG00000019680	ENSMOCG00000018426	Slc25a44 (ENSMOCG00000014671) #15	Sema4a (ENSMOCG00000022467) #16	Lmna (ENSMOCG00000011854) #18	Mex3a (ENSMOCG00000017881) #19	Rab25 (ENSMOCG00000010953) #20	Lamtor2 (ENSMOCG00000018988) #21	ENSMOCG00000013140 #22	Ssr2 (ENSMOCG00000001890) #23	ENSMOCG00000020991 #24	ENSMOCG00000019234 #24	ENSMOCG00000007816 #26
Prairie vole	MODERN SPECIES	360	Ptchd1 (ENSMOCG00000020483)	Prdx4 (ENSMOCG00000014602)	ENSMOCG00000002108	Sat1 (ENSMOCG00000012276)	ENSMOCG00000012729	ENSMOCG00000021049	ENSMOCG00000013763	Spin2c (ENSMOCG00000001348)	ENSMOCG00000003551	Kctd12b (ENSMOCG00000015728)	Klf8 (ENSMOCG00000000163)	ENSMOCG00000002121	ENSMOCG00000013664	Rragb (ENSMOCG00000010568)	Mageh1 (ENSMOCG00000010509)	ENSMOCG00000010679 #22	Tmem29 (ENSMOCG00000020676)	ENSMOCG00000021282	Alas2 (ENSMOCG00000021931)	Apex2 (ENSMOCG00000004339)	Pfkfb1 (ENSMOCG00000017052)	ENSMOCG00000017394	Maged2 (ENSMOCG00000013159)	Gnl3l (ENSMOCG00000021622)	Fgd1 (ENSMOCG00000006370)	Tsr2 (ENSMOCG00000006662)	Wnk3 (ENSMOCG00000005941)	Fam120c (ENSMOCG00000019667)	Phf8 (ENSMOCG00000014989)	Huwe1 (ENSMOCG00000009594)	ENSMOCG00000000414
Prairie vole	MODERN SPECIES	5	Ticam2 (ENSMOCG00000002517)	Fem1c (ENSMOCG00000009368)	Ccdc112 (ENSMOCG00000014847)	Pggt1b (ENSMOCG00000020848)	Trim36 (ENSMOCG00000005907)	ENSMOCG00000000243	Kcnn2 (ENSMOCG00000021123)	Ythdc2 (ENSMOCG00000011740)	Mcc (ENSMOCG00000013709)	Dcp2 (ENSMOCG00000014965)	Myot (ENSMOCG00000002496)	Gm10267 (ENSMOCG00000021096)	Gm37797 (ENSMOCG00000014585)	Spink12 (ENSMOCG00000003286)	Spink6 (ENSMOCG00000022042)	ENSMOCG00000016974 #22	Spink14 (ENSMOCG00000003998)	Spink5 (ENSMOCG00000015103)	Gm94 (ENSMOCG00000021778)	Scgb3a2 (ENSMOCG00000004730)	Spink1 (ENSMOCG00000020829)	ENSMOCG00000011603	Jakmip2 (ENSMOCG00000020018)	ENSMOCG00000019124	Stk32a (ENSMOCG00000013476)	Ppp2r2b (ENSMOCG00000011221)	Gpr151 (ENSMOCG00000010704)	Tcerg1 (ENSMOCG00000021988)	Pou4f3 (ENSMOCG00000014304)	Rbm27 (ENSMOCG00000019479)	Lars (ENSMOCG00000002092)
Northern American deer mouse	MODERN SPECIES	19	Rhbg (ENSPEMG00000011996) #7	Tsacc (ENSPEMG00000014593) #8	Cct3 (ENSPEMG00000015732) #9	Glmp (ENSPEMG00000013529) #11	Tmem79 (ENSPEMG00000007739) #12	Smg5 (ENSPEMG00000001819) #13	Paqr6 (ENSPEMG00000002777) #14	ENSPEMG00000025586	Pmf1 (ENSPEMG00000012625)	Slc25a44 (ENSPEMG00000013362) #15	Sema4a (ENSPEMG00000015516) #16	Lmna (ENSPEMG00000015821) #18	Mex3a (ENSPEMG00000019014) #19	Rab25 (ENSPEMG00000007548) #20	Lamtor2 (ENSPEMG00000009818) #21	Ubqln4 (ENSPEMG00000016759) #22	Ssr2 (ENSPEMG00000012464) #23	Arhgef2 (ENSPEMG00000002997) #24	Rxfp4 (ENSPEMG00000011662)	Khdc4 (ENSPEMG00000007794) #26	Rit1 (ENSPEMG00000030433) #27	Syt11 (ENSPEMG00000003809) #28	Gon4l (ENSPEMG00000017252) #29	Msto1 (ENSPEMG00000016178) #33	ENSPEMG00000019185 #31	Ash1l (ENSPEMG00000006789) #32	Rusc1 (ENSPEMG00000018232) #35	Fdps (ENSPEMG00000030569) #37	Pklr (ENSPEMG00000010915)	Hcn3 (ENSPEMG00000009033)	Clk2 (ENSPEMG00000012240)
Murinae	ANCESTRAL SPECIES	5	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.u #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Mus	ANCESTRAL SPECIES	7	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #35	ENSGT00900000141033.b.b.u #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131.e #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #35	ENSGT00900000141033.b.b.u #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131.e #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #35	ENSGT00900000141033.b.b.u #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Mouse	MODERN SPECIES	12	Cct3 (ENSMUSG00000001416) #9	Glmp (ENSMUSG00000001418) #11	Tmem79 (ENSMUSG00000001420) #12	Smg5 (ENSMUSG00000001415) #13	Paqr6 (ENSMUSG00000041423) #14	Bglap3 (ENSMUSG00000074489)	Bglap2 (ENSMUSG00000074486)	Bglap (ENSMUSG00000074483)	Pmf1 (ENSMUSG00000028066)	Slc25a44 (ENSMUSG00000050144) #15	Sema4a (ENSMUSG00000028064) #16	Lmna (ENSMUSG00000028063) #18	Mex3a (ENSMUSG00000074480) #19	Rab25 (ENSMUSG00000008601) #20	Lamtor2 (ENSMUSG00000028062) #21	Ubqln4 (ENSMUSG00000008604) #22	Ssr2 (ENSMUSG00000041355) #23	Arhgef2 (ENSMUSG00000028059) #24	Rxfp4 (ENSMUSG00000049741)	Khdc4 (ENSMUSG00000028060) #26	Rit1 (ENSMUSG00000028057) #27	Syt11 (ENSMUSG00000068923) #28	Gon4l (ENSMUSG00000054199) #29	Msto1 (ENSMUSG00000068922) #33	Dap3 (ENSMUSG00000068921) #31	Ash1l (ENSMUSG00000028053) #32	Rusc1 (ENSMUSG00000041263) #35	Fdps (ENSMUSG00000059743) #37	Pklr (ENSMUSG00000041237)	Hcn3 (ENSMUSG00000028051)	Clk2 (ENSMUSG00000068917)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00950000182844.b.b.a.b #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131.e #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b.v #35	ENSGT00900000141033.b.b.u #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023
Steppe mouse	MODERN SPECIES	2494	ENSMSIG00000029349 #8	Cct3 (ENSMSIG00000029307) #9	Glmp (ENSMSIG00000029280) #11	Tmem79 (ENSMSIG00000029273) #12	Smg5 (ENSMSIG00000029250) #13	ENSMSIG00000029245 #14	ENSMSIG00000029238	Pmf1 (ENSMSIG00000029235)	Slc25a44 (ENSMSIG00000029225) #15	ENSMSIG00000029223	Sema4a (ENSMSIG00000029207) #16	Lmna (ENSMSIG00000029196) #18	ENSMSIG00000029193 #19	Rab25 (ENSMSIG00000029192) #20	Lamtor2 (ENSMSIG00000029190) #21	Ubqln4 (ENSMSIG00000029187) #22	Ssr2 (ENSMSIG00000029173) #23	Arhgef2 (ENSMSIG00000028473) #24	ENSMSIG00000028469 #25	Khdc4 (ENSMSIG00000028451) #26	Rit1 (ENSMSIG00000028448) #27	Syt11 (ENSMSIG00000028436) #28
spretus	MODERN SPECIES	12	Cct3 (MGP_SPRETEiJ_G0026101) #9	Glmp (MGP_SPRETEiJ_G0026102) #11	Tmem79 (MGP_SPRETEiJ_G0026103) #12	Smg5 (MGP_SPRETEiJ_G0026104) #13	Paqr6 (MGP_SPRETEiJ_G0026105) #14	MGP_SPRETEiJ_G0026106	MGP_SPRETEiJ_G0026108	MGP_SPRETEiJ_G0026107	Pmf1 (MGP_SPRETEiJ_G0026109)	Slc25a44 (MGP_SPRETEiJ_G0026110) #15	Sema4a (MGP_SPRETEiJ_G0026111) #16	Lmna (MGP_SPRETEiJ_G0026112) #18	MGP_SPRETEiJ_G0026113 #19	Rab25 (MGP_SPRETEiJ_G0026114) #20	Lamtor2 (MGP_SPRETEiJ_G0026115) #21	Ubqln4 (MGP_SPRETEiJ_G0026116) #22	Ssr2 (MGP_SPRETEiJ_G0026117) #23	Arhgef2 (MGP_SPRETEiJ_G0026118) #24	Rxfp4 (MGP_SPRETEiJ_G0026119)	Khdc4 (MGP_SPRETEiJ_G0026120) #26	Rit1 (MGP_SPRETEiJ_G0026121) #27	Syt11 (MGP_SPRETEiJ_G0026122) #28	Gon4l (MGP_SPRETEiJ_G0026123) #29	Msto1 (MGP_SPRETEiJ_G0026124) #33	Dap3 (MGP_SPRETEiJ_G0026125) #31	Ash1l (MGP_SPRETEiJ_G0026126) #32	MGP_SPRETEiJ_G0026127 #35	Rusc1 (MGP_SPRETEiJ_G0026128) #35	Fdps (MGP_SPRETEiJ_G0026129) #37	Pklr (MGP_SPRETEiJ_G0026130)	Hcn3 (MGP_SPRETEiJ_G0026131)
Ryukyu mouse	MODERN SPECIES	12	MGP_CAROLIEiJ_G0025158 #7	Tsacc (MGP_CAROLIEiJ_G0025159) #8	Cct3 (MGP_CAROLIEiJ_G0025160) #9	Glmp (MGP_CAROLIEiJ_G0025161) #11	Tmem79 (MGP_CAROLIEiJ_G0025162) #12	Smg5 (MGP_CAROLIEiJ_G0025163) #13	Paqr6 (MGP_CAROLIEiJ_G0025164) #14	MGP_CAROLIEiJ_G0025165	Pmf1 (MGP_CAROLIEiJ_G0025166)	Slc25a44 (MGP_CAROLIEiJ_G0025167) #15	Sema4a (MGP_CAROLIEiJ_G0025168) #16	Lmna (MGP_CAROLIEiJ_G0025169) #18	Mex3a (MGP_CAROLIEiJ_G0025170) #19	Rab25 (MGP_CAROLIEiJ_G0025171) #20	Lamtor2 (MGP_CAROLIEiJ_G0025172) #21	Ubqln4 (MGP_CAROLIEiJ_G0025173) #22	Ssr2 (MGP_CAROLIEiJ_G0025174) #23	Arhgef2 (MGP_CAROLIEiJ_G0025175) #24	Rxfp4 (MGP_CAROLIEiJ_G0025176)	Khdc4 (MGP_CAROLIEiJ_G0025177) #26	Rit1 (MGP_CAROLIEiJ_G0025178) #27	Syt11 (MGP_CAROLIEiJ_G0025179) #28	MGP_CAROLIEiJ_G0025180 #29	Msto1 (MGP_CAROLIEiJ_G0025181) #33	Dap3 (MGP_CAROLIEiJ_G0025182) #31	Ash1l (MGP_CAROLIEiJ_G0025183) #32	MGP_CAROLIEiJ_G0025184 #35	Rusc1 (MGP_CAROLIEiJ_G0025185) #35	Fdps (MGP_CAROLIEiJ_G0025186) #37	Pklr (MGP_CAROLIEiJ_G0025187)	Hcn3 (MGP_CAROLIEiJ_G0025188)
Shrew mouse	MODERN SPECIES	17	Tsacc (MGP_PahariEiJ_G0026602) #8	MGP_PahariEiJ_G0026603 #9	Glmp (MGP_PahariEiJ_G0026604) #11	Tmem79 (MGP_PahariEiJ_G0026605) #12	Smg5 (MGP_PahariEiJ_G0026606) #13	Paqr6 (MGP_PahariEiJ_G0026607) #14	MGP_PahariEiJ_G0026610	MGP_PahariEiJ_G0026609	Pmf1 (MGP_PahariEiJ_G0026611)	Slc25a44 (MGP_PahariEiJ_G0026612) #15	Sema4a (MGP_PahariEiJ_G0026613) #16	Lmna (MGP_PahariEiJ_G0026614) #18	Mex3a (MGP_PahariEiJ_G0026615) #19	Rab25 (MGP_PahariEiJ_G0026616) #20	Lamtor2 (MGP_PahariEiJ_G0026617) #21	Ubqln4 (MGP_PahariEiJ_G0026618) #22	Ssr2 (MGP_PahariEiJ_G0026619) #23	Arhgef2 (MGP_PahariEiJ_G0026620) #24	Khdc4 (MGP_PahariEiJ_G0026621) #26	Rit1 (MGP_PahariEiJ_G0026622) #27	Syt11 (MGP_PahariEiJ_G0026623) #28	Gon4l (MGP_PahariEiJ_G0026624) #29	MGP_PahariEiJ_G0026625 #33	Dap3 (MGP_PahariEiJ_G0026626) #31	Ash1l (MGP_PahariEiJ_G0026627) #32	MGP_PahariEiJ_G0026628 #35	Rusc1 (MGP_PahariEiJ_G0026629) #35	Fdps (MGP_PahariEiJ_G0026630) #37	Pklr (MGP_PahariEiJ_G0026631)	Hcn3 (MGP_PahariEiJ_G0026632)	Clk2 (MGP_PahariEiJ_G0026633)
Rat	MODERN SPECIES	11	Rhbg (ENSRNOG00000019412) #7	Tsacc (ENSRNOG00000037552) #8	Cct3 (ENSRNOG00000019090) #9	Glmp (ENSRNOG00000019281) #11	Tmem79 (ENSRNOG00000019414) #12	Smg5 (ENSRNOG00000019590) #13	Paqr6 (ENSRNOG00000026059) #14	Bglap (ENSRNOG00000019607)	Pmf1 (ENSRNOG00000019620)	Slc25a44 (ENSRNOG00000025269) #15	Sema4a (ENSRNOG00000019737) #16	Lmna (ENSRNOG00000019638) #18	Mex3a (ENSRNOG00000058654) #19	Rab25 (ENSRNOG00000023640) #20	Lamtor2 (ENSRNOG00000019908) #21	Ubqln4 (ENSRNOG00000019933) #22	Ssr2 (ENSRNOG00000019940) #23	Arhgef2 (ENSRNOG00000020027) #24	Khdc4 (ENSRNOG00000020139) #26	Rit1 (ENSRNOG00000064584) #27	Syt11 (ENSRNOG00000020279) #28	Gon4l (ENSRNOG00000020297) #29	Msto1 (ENSRNOG00000020357) #33	Dap3 (ENSRNOG00000020373) #31	Ash1l (ENSRNOG00000020386) #32	Fdps (ENSRNOG00000043377) #35	Pklr (ENSRNOG00000020420)	Hcn3 (ENSRNOG00000020444)	Scamp3 (ENSRNOG00000020500)	Entrep3 (ENSRNOG00000020518)	Gba (ENSRNOG00000049281)
Upper Galilee mountains blind mole rat	MODERN SPECIES	497	Mef2d (ENSNGAG00000016036)	Rhbg (ENSNGAG00000019322) #7	Cct3 (ENSNGAG00000016875) #9	Glmp (ENSNGAG00000019347) #11	Tmem79 (ENSNGAG00000020294) #12	Smg5 (ENSNGAG00000020706) #13	Paqr6 (ENSNGAG00000000673) #14	ENSNGAG00000001625	Pmf1 (ENSNGAG00000007750)	Slc25a44 (ENSNGAG00000010575) #15	Sema4a (ENSNGAG00000012750) #16	Lmna (ENSNGAG00000017368) #18	Mex3a (ENSNGAG00000019587) #19	Rab25 (ENSNGAG00000019999) #20	Lamtor2 (ENSNGAG00000020249) #21	Ubqln4 (ENSNGAG00000020831) #22	Ssr2 (ENSNGAG00000002859) #23	ENSNGAG00000009107 #24	ENSNGAG00000011350 #24	Khdc4 (ENSNGAG00000012421) #26	Rit1 (ENSNGAG00000013104) #27	Syt11 (ENSNGAG00000013529) #28	Gon4l (ENSNGAG00000020844) #29	Msto1 (ENSNGAG00000022769) #33	Dap3 (ENSNGAG00000014173) #31	Ash1l (ENSNGAG00000021986) #32	Rusc1 (ENSNGAG00000008260) #35	Pklr (ENSNGAG00000019876)	Hcn3 (ENSNGAG00000021908)	Clk2 (ENSNGAG00000022518)	Scamp3 (ENSNGAG00000001034)
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Artiodactyla	ANCESTRAL SPECIES		ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Cetacea	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524.a.a #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.k #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Odontoceti	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524.a.a #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100.g.a #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.k #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524.a.a.a #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100.g.a #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.k #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Dolphin	MODERN SPECIES	1344													MEX3A (ENSTTRG00000013346) #19	RAB25 (ENSTTRG00000013345) #20	LAMTOR2 (ENSTTRG00000013344) #21	UBQLN4 (ENSTTRG00000013343) #22	SSR2 (ENSTTRG00000013342) #23	ARHGEF2 (ENSTTRG00000013341) #24	KHDC4 (ENSTTRG00000013339) #26	RIT1 (ENSTTRG00000013338) #27	SYT11 (ENSTTRG00000013337) #28	ENSTTRG00000013336 #29	ENSTTRG00000013334	DAP3 (ENSTTRG00000013332) #31	ASH1L (ENSTTRG00000013329) #32	RUSC1 (ENSTTRG00000013327) #35	FDPS (ENSTTRG00000013326) #37
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524.a.a.a #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100.g.a #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.k #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Vaquita	MODERN SPECIES		RHBG (ENSPSNG00000002332) #7	ENSPSNG00000002309 #8	CCT3 (ENSPSNG00000002288) #9	GLMP (ENSPSNG00000002245) #11	TMEM79 (ENSPSNG00000002228) #12	SMG5 (ENSPSNG00000002185) #13	PAQR6 (ENSPSNG00000002135) #14	BGLAP (ENSPSNG00000002109)	ENSPSNG00000002083	SLC25A44 (ENSPSNG00000002061) #15	SEMA4A (ENSPSNG00000001991) #16	LMNA (ENSPSNG00000001902) #18	MEX3A (ENSPSNG00000001802) #19	RAB25 (ENSPSNG00000001780) #20	ENSPSNG00000001753 #21	UBQLN4 (ENSPSNG00000001709) #22	SSR2 (ENSPSNG00000001665) #23	ARHGEF2 (ENSPSNG00000001483) #24	KHDC4 (ENSPSNG00000001328) #26	RIT1 (ENSPSNG00000001303) #27	SYT11 (ENSPSNG00000001267) #28	ENSPSNG00000001061 #29	MSTO1 (ENSPSNG00000000978) #33	DAP3 (ENSPSNG00000000898) #31	ASH1L (ENSPSNG00000000798) #32	RUSC1 (ENSPSNG00000000714) #35	ENSPSNG00000000654 #37	PKLR (ENSPSNG00000000611)	HCN3 (ENSPSNG00000000564)	CLK2 (ENSPSNG00000000440)	SCAMP3 (ENSPSNG00000000384)
Monodontidae	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524.a.a.a #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100.g.a #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.k #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Narwhal	MODERN SPECIES	304	RHBG (ENSMMNG00015011460) #7	ENSMMNG00015011474 #8	CCT3 (ENSMMNG00015011489) #9	GLMP (ENSMMNG00015011520) #11	TMEM79 (ENSMMNG00015011552) #12	SMG5 (ENSMMNG00015011588) #13	ENSMMNG00015011675 #14	BGLAP (ENSMMNG00015011726)	ENSMMNG00015011739	SLC25A44 (ENSMMNG00015011755) #15	SEMA4A (ENSMMNG00015011785) #16	LMNA (ENSMMNG00015011841) #18	MEX3A (ENSMMNG00015011903) #19	RAB25 (ENSMMNG00015011919) #20	ENSMMNG00015011942 #21	UBQLN4 (ENSMMNG00015011968) #22	SSR2 (ENSMMNG00015012014) #23	ARHGEF2 (ENSMMNG00015012060) #24	KHDC4 (ENSMMNG00015012142) #26	RIT1 (ENSMMNG00015012172) #27	SYT11 (ENSMMNG00015012196) #28	ENSMMNG00015012250 #29	MSTO1 (ENSMMNG00015012309) #33	DAP3 (ENSMMNG00015012383) #31	ASH1L (ENSMMNG00015012492) #32	RUSC1 (ENSMMNG00015012570) #35	ENSMMNG00015012598 #37	PKLR (ENSMMNG00015012630)	HCN3 (ENSMMNG00015012673)	CLK2 (ENSMMNG00015012695)	SCAMP3 (ENSMMNG00015012743)
Beluga whale	MODERN SPECIES	69	RHBG (ENSDLEG00000019871) #7	ENSDLEG00000019867 #8	CCT3 (ENSDLEG00000019863) #9	GLMP (ENSDLEG00000019860) #11	TMEM79 (ENSDLEG00000019854) #12	SMG5 (ENSDLEG00000019769) #13	PAQR6 (ENSDLEG00000019756) #14	BGLAP (ENSDLEG00000019752)	ENSDLEG00000019747	SLC25A44 (ENSDLEG00000019739) #15	SEMA4A (ENSDLEG00000019729) #16	MEX3A (ENSDLEG00000019727) #19	LMNA (ENSDLEG00000019723) #18	RAB25 (ENSDLEG00000019718) #20	ENSDLEG00000019714 #21	UBQLN4 (ENSDLEG00000019705) #22	SSR2 (ENSDLEG00000019690) #23	ARHGEF2 (ENSDLEG00000018134) #24	KIAA0907 (ENSDLEG00000017767) #26	RIT1 (ENSDLEG00000017727) #27	SYT11 (ENSDLEG00000017715) #28	ENSDLEG00000017562 #29	MSTO1 (ENSDLEG00000017154) #33	DAP3 (ENSDLEG00000016565) #31	ASH1L (ENSDLEG00000016452) #32	RUSC1 (ENSDLEG00000016359) #35	FDPS (ENSDLEG00000016328) #37	PKLR (ENSDLEG00000015946)	HCN3 (ENSDLEG00000015901)	SCAMP3 (ENSDLEG00000015441)	FAM189B (ENSDLEG00000015147)
Sperm whale	MODERN SPECIES	15	TTC24 (ENSPCTG00005009800)	NAXE (ENSPCTG00005009979)	ENSPCTG00005010033 #8	ENSPCTG00005010076 #9	SEMA4A (ENSPCTG00005010191) #16	ENSPCTG00005010331	ENSPCTG00005010348	ENSPCTG00005010364	SLC25A44 (ENSPCTG00005010382) #15	PMF1 (ENSPCTG00005010461)	BGLAP (ENSPCTG00005010569)	PAQR6 (ENSPCTG00005010635) #14	SMG5 (ENSPCTG00005010741) #13	RAB25 (ENSPCTG00005010780) #20	LAMTOR2 (ENSPCTG00005010831) #21	UBQLN4 (ENSPCTG00005010892) #22	SSR2 (ENSPCTG00005010954) #23	RIT1 (ENSPCTG00005011092) #27	SYT11 (ENSPCTG00005011179) #28	GON4L (ENSPCTG00005011256) #29	MSTO1 (ENSPCTG00005011784) #33	DAP3 (ENSPCTG00005011863) #31	ASH1L (ENSPCTG00005012095) #32	KCNN3 (ENSPCTG00005012225)	ADAR (ENSPCTG00005012266)	SHC1 (ENSPCTG00005012451)	PBXIP1 (ENSPCTG00005012606)	EFNA3 (ENSPCTG00005012694)	TDRD10 (ENSPCTG00005012748)	SHE (ENSPCTG00005012880)	IL6R (ENSPCTG00005012978)
Blue whale	MODERN SPECIES		ENSBMSG00010004948	MEF2D (ENSBMSG00010004921)	RHBG (ENSBMSG00010004893) #7	CCT3 (ENSBMSG00010004881) #9	GLMP (ENSBMSG00010004864) #11	TMEM79 (ENSBMSG00010004850) #12	SMG5 (ENSBMSG00010004787) #13	BGLAP (ENSBMSG00010004757)	ENSBMSG00010004738	SLC25A44 (ENSBMSG00010004726) #15	SEMA4A (ENSBMSG00010004700) #16	LMNA (ENSBMSG00010004668) #18	MEX3A (ENSBMSG00010004637) #19	RAB25 (ENSBMSG00010004624) #20	LAMTOR2 (ENSBMSG00010004612) #21	UBQLN4 (ENSBMSG00010004574) #22	SSR2 (ENSBMSG00010004540) #23	ARHGEF2 (ENSBMSG00010004265) #24	KHDC4 (ENSBMSG00010004174) #26	RIT1 (ENSBMSG00010004147) #27	SYT11 (ENSBMSG00010004119) #28	ENSBMSG00010004110	ENSBMSG00010003566 #29	MSTO1 (ENSBMSG00010003477) #33	DAP3 (ENSBMSG00010003437) #31	ASH1L (ENSBMSG00010003357) #32	RUSC1 (ENSBMSG00010003260) #35	ENSBMSG00010003229 #37	PKLR (ENSBMSG00010003143)	ENSBMSG00010003104	CLK2 (ENSBMSG00010003067)
Pecora	ANCESTRAL SPECIES	2	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Yarkand deer	MODERN SPECIES	12	MEF2D (ENSCHYG00000022984)	RHBG (ENSCHYG00000023227) #7	TSACC (ENSCHYG00000023310) #8	CCT3 (ENSCHYG00000023340) #9	GLMP (ENSCHYG00000023522) #11	TMEM79 (ENSCHYG00000023640) #12	SMG5 (ENSCHYG00000023680) #13	ENSCHYG00000023870 #14	ENSCHYG00000024011	SLC25A44 (ENSCHYG00000024104) #15	SEMA4A (ENSCHYG00000024199) #16	LMNA (ENSCHYG00000024365) #18	MEX3A (ENSCHYG00000024742) #19	RAB25 (ENSCHYG00000024758) #20	ENSCHYG00000024792 #21	UBQLN4 (ENSCHYG00000024829) #22	SSR2 (ENSCHYG00000024941) #23	ARHGEF2 (ENSCHYG00000025091) #24	ENSCHYG00000025955 #25	KHDC4 (ENSCHYG00000025994) #26	RIT1 (ENSCHYG00000026149) #27	SYT11 (ENSCHYG00000026203) #28	MSTO1 (ENSCHYG00000026231) #33	ENSCHYG00000026325 #31	ASH1L (ENSCHYG00000026415) #32	RUSC1 (ENSCHYG00000026489) #35	FDPS (ENSCHYG00000026456) #37	PKLR (ENSCHYG00000004833)	HCN3 (ENSCHYG00000004855)	CLK2 (ENSCHYG00000004875)	SCAMP3 (ENSCHYG00000004931)
Percora_a	ANCESTRAL SPECIES	1	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Bovidae	ANCESTRAL SPECIES	1	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Caprinae	ANCESTRAL SPECIES	2	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Rambouillet Sheep	MODERN SPECIES		RHBG (ENSOARG00020017414) #7	TSACC (ENSOARG00020017382) #8	CCT3 (ENSOARG00020017271) #9	GLMP (ENSOARG00020017115) #11	TMEM79 (ENSOARG00020017071) #12	SMG5 (ENSOARG00020016889) #13	PAQR6 (ENSOARG00020016793) #14	BGLAP (ENSOARG00020016735)	PMF1 (ENSOARG00020016596)	SLC25A44 (ENSOARG00020016505) #15	SEMA4A (ENSOARG00020016412) #16	LMNA (ENSOARG00020016018) #18	MEX3A (ENSOARG00020015946) #19	RAB25 (ENSOARG00020015913) #20	LAMTOR2 (ENSOARG00020015838) #21	UBQLN4 (ENSOARG00020015789) #22	ENSOARG00020015739	SSR2 (ENSOARG00020015600) #23	ARHGEF2 (ENSOARG00020014346) #24	RXFP4 (ENSOARG00020014277)	KHDC4 (ENSOARG00020014119) #26	RIT1 (ENSOARG00020013942) #27	SYT11 (ENSOARG00020013872) #28	ENSOARG00020013774 #29	ENSOARG00020013192 #29	ENSOARG00020013143 #29	MSTO1 (ENSOARG00020013057) #33	DAP3 (ENSOARG00020012723) #31	ENSOARG00020012690	ASH1L (ENSOARG00020012553) #32	RUSC1 (ENSOARG00020012314) #35
Goat	MODERN SPECIES	22	RHBG (ENSCHIG00000018535) #7	TSACC (ENSCHIG00000008701) #8	CCT3 (ENSCHIG00000011665) #9	GLMP (ENSCHIG00000018226) #11	TMEM79 (ENSCHIG00000024223) #12	SMG5 (ENSCHIG00000007709) #13	PAQR6 (ENSCHIG00000019473) #14	BGLAP (ENSCHIG00000025718)	ENSCHIG00000025721	SLC25A44 (ENSCHIG00000011510) #15	SEMA4A (ENSCHIG00000022763) #16	LMNA (ENSCHIG00000022777) #18	MEX3A (ENSCHIG00000012770) #19	RAB25 (ENSCHIG00000018911) #20	LAMTOR2 (ENSCHIG00000026461) #21	UBQLN4 (ENSCHIG00000015053) #22	SSR2 (ENSCHIG00000027199) #23	ARHGEF2 (ENSCHIG00000018812) #24	ENSCHIG00000012796 #25	KHDC4 (ENSCHIG00000022965) #26	RIT1 (ENSCHIG00000010506) #27	SYT11 (ENSCHIG00000021455) #28	ENSCHIG00000025192 #29	ENSCHIG00000011207 #29	ENSCHIG00000021776 #29	MSTO1 (ENSCHIG00000027233) #33	DAP3 (ENSCHIG00000017638) #31	ASH1L (ENSCHIG00000026354) #32	RUSC1 (ENSCHIG00000014020) #35	FDPS (ENSCHIG00000020170) #37	PKLR (ENSCHIG00000006078)
Bovinae	ANCESTRAL SPECIES	1	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Bos	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Bos_b	ANCESTRAL SPECIES	1	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Hybrid Bos Indicus	MODERN SPECIES	22	RHBG (ENSBIXG00005013672) #7	TSACC (ENSBIXG00005013651) #8	CCT3 (ENSBIXG00005013620) #9	GLMP (ENSBIXG00005013569) #11	TMEM79 (ENSBIXG00005013531) #12	SMG5 (ENSBIXG00005013497) #13	PAQR6 (ENSBIXG00005001616) #14	BGLAP (ENSBIXG00005013414)	ENSBIXG00005013392	SLC25A44 (ENSBIXG00005013383) #15	SEMA4A (ENSBIXG00005013357) #16	LMNA (ENSBIXG00005013303) #18	MEX3A (ENSBIXG00005013155) #19	RAB25 (ENSBIXG00005001504) #20	LAMTOR2 (ENSBIXG00005013118) #21	UBQLN4 (ENSBIXG00005007481) #22	SSR2 (ENSBIXG00005013052) #23	ARHGEF2 (ENSBIXG00005012933) #24	ENSBIXG00005012726 #25	KHDC4 (ENSBIXG00005012701) #26	RIT1 (ENSBIXG00005012630) #27	SYT11 (ENSBIXG00005012585) #28	ENSBIXG00005000325 #29	MSTO1 (ENSBIXG00005012454) #33	DAP3 (ENSBIXG00005012416) #31	ASH1L (ENSBIXG00005012290) #32	RUSC1 (ENSBIXG00005012185) #35	FDPS (ENSBIXG00005012083) #37	PKLR (ENSBIXG00005012018)	HCN3 (ENSBIXG00005011927)	SCAMP3 (ENSBIXG00005006790)
Cow	MODERN SPECIES	22	RHBG (ENSBTAG00000012234) #7	TSACC (ENSBTAG00000049722) #8	CCT3 (ENSBTAG00000006370) #9	GLMP (ENSBTAG00000006364) #11	TMEM79 (ENSBTAG00000009436) #12	SMG5 (ENSBTAG00000009435) #13	PAQR6 (ENSBTAG00000009434) #14	BGLAP (ENSBTAG00000009433)	PMF1 (ENSBTAG00000009432)	SLC25A44 (ENSBTAG00000009431) #15	SEMA4A (ENSBTAG00000012228) #16	LMNA (ENSBTAG00000017574) #18	MEX3A (ENSBTAG00000019158) #19	RAB25 (ENSBTAG00000018914) #20	LAMTOR2 (ENSBTAG00000011754) #21	UBQLN4 (ENSBTAG00000001548) #22	SSR2 (ENSBTAG00000001212) #23	ARHGEF2 (ENSBTAG00000000113) #24	KHDC4 (ENSBTAG00000000108)	RIT1 (ENSBTAG00000000105) #27	SYT11 (ENSBTAG00000011209) #28	GON4L (ENSBTAG00000020356) #29	ENSBTAG00000045596 #29	MSTO1 (ENSBTAG00000026613) #33	DAP3 (ENSBTAG00000001199) #31	ASH1L (ENSBTAG00000003954) #32	RUSC1 (ENSBTAG00000054061) #35	FDPS (ENSBTAG00000003948) #37	PKLR (ENSBTAG00000017056)	HCN3 (ENSBTAG00000017055)	CLK2 (ENSBTAG00000014393)
Bos_a	ANCESTRAL SPECIES	27	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.i.a.a #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Domestic yak	MODERN SPECIES	22	RHBG (ENSBGRG00000024238) #7	TSACC (ENSBGRG00000024207) #8	CCT3 (ENSBGRG00000023849) #9	GLMP (ENSBGRG00000023724) #11	ENSBGRG00000023682	SMG5 (ENSBGRG00000023383) #13	PAQR6 (ENSBGRG00000023244) #14	BGLAP (ENSBGRG00000023200)	ENSBGRG00000023141	SLC25A44 (ENSBGRG00000023097) #15	SEMA4A (ENSBGRG00000023018) #16	LMNA (ENSBGRG00000022777) #18	MEX3A (ENSBGRG00000022736) #19	RAB25 (ENSBGRG00000022700) #20	ENSBGRG00000022629 #21	UBQLN4 (ENSBGRG00000022445) #22	ENSBGRG00000022398	SSR2 (ENSBGRG00000022293) #23	ARHGEF2 (ENSBGRG00000022001) #24	ENSBGRG00000021933 #25	KHDC4 (ENSBGRG00000021657) #26	RIT1 (ENSBGRG00000021581) #27	SYT11 (ENSBGRG00000021562) #28	ENSBGRG00000021494 #29	ENSBGRG00000021483	ENSBGRG00000021040 #29	MSTO1 (ENSBGRG00000020857) #33	ENSBGRG00000020608 #31	ENSBGRG00000020578	ASH1L (ENSBGRG00000020526) #32	RUSC1 (ENSBGRG00000020363) #35
Wild yak	MODERN SPECIES	1034	MEF2D (ENSBMUG00000014724)	RHBG (ENSBMUG00000014644) #7	TSACC (ENSBMUG00000014639) #8	CCT3 (ENSBMUG00000014597) #9	GLMP (ENSBMUG00000014534) #11	TMEM79 (ENSBMUG00000014504) #12	SMG5 (ENSBMUG00000014498) #13	PAQR6 (ENSBMUG00000014479) #14	ENSBMUG00000014459	SLC25A44 (ENSBMUG00000014438) #15	SEMA4A (ENSBMUG00000014414) #16	LMNA (ENSBMUG00000014271) #18	MEX3A (ENSBMUG00000014139) #19	RAB25 (ENSBMUG00000014113) #20	ENSBMUG00000014101 #21	UBQLN4 (ENSBMUG00000014079) #22	SSR2 (ENSBMUG00000014061) #23	ARHGEF2 (ENSBMUG00000013945) #24	ENSBMUG00000013792 #25	KHDC4 (ENSBMUG00000013747) #26	RIT1 (ENSBMUG00000013671) #27	SYT11 (ENSBMUG00000013663) #28	ENSBMUG00000013609 #29	MSTO1 (ENSBMUG00000013423) #33	DAP3 (ENSBMUG00000013380) #31	ASH1L (ENSBMUG00000013247) #32	RUSC1 (ENSBMUG00000013186) #35	FDPS (ENSBMUG00000013151) #37	PKLR (ENSBMUG00000013109)	HCN3 (ENSBMUG00000013008)	CLK2 (ENSBMUG00000012989)
American bison	MODERN SPECIES	3022	RHBG (ENSBBBG00000003929) #7	TSACC (ENSBBBG00000015743) #8	CCT3 (ENSBBBG00000015738) #9	GLMP (ENSBBBG00000015689) #11	ENSBBBG00000003912	SMG5 (ENSBBBG00000015667) #13	PAQR6 (ENSBBBG00000015650) #14	BGLAP (ENSBBBG00000015635)	PMF1 (ENSBBBG00000015627)	SLC25A44 (ENSBBBG00000003424) #15	SEMA4A (ENSBBBG00000003444) #16	LMNA (ENSBBBG00000003866) #18	MEX3A (ENSBBBG00000015363) #19	RAB25 (ENSBBBG00000003829) #20	LAMTOR2 (ENSBBBG00000003825) #21	UBQLN4 (ENSBBBG00000007559) #22	SSR2 (ENSBBBG00000003501) #23	ARHGEF2 (ENSBBBG00000001262) #24	RXFP4 (ENSBBBG00000001313)	KHDC4 (ENSBBBG00000001328) #26	RIT1 (ENSBBBG00000015315) #27	SYT11 (ENSBBBG00000003798) #28	ENSBBBG00000007558 #29	ENSBBBG00000015141	MSTO1 (ENSBBBG00000015135) #33	DAP3 (ENSBBBG00000003747) #31	ASH1L (ENSBBBG00000014991) #32	ENSBBBG00000014947 #35	ENSBBBG00000014944 #35	FDPS (ENSBBBG00000014941) #37	PKLR (ENSBBBG00000014928)
Siberian musk deer	MODERN SPECIES	1202	TSACC (ENSMMSG00000021888) #8	CCT3 (ENSMMSG00000021905) #9	GLMP (ENSMMSG00000021977) #11	TMEM79 (ENSMMSG00000022007) #12	SMG5 (ENSMMSG00000022024) #13	PAQR6 (ENSMMSG00000022081) #14	BGLAP (ENSMMSG00000022141)	PMF1 (ENSMMSG00000022165)	SLC25A44 (ENSMMSG00000022189) #15	SEMA4A (ENSMMSG00000022204) #16	ENSMMSG00000022232	LMNA (ENSMMSG00000022290) #18	MEX3A (ENSMMSG00000022428) #19	RAB25 (ENSMMSG00000022435) #20	LAMTOR2 (ENSMMSG00000022447) #21	UBQLN4 (ENSMMSG00000022457) #22	SSR2 (ENSMMSG00000022486) #23	ARHGEF2 (ENSMMSG00000022532) #24	RXFP4 (ENSMMSG00000022594)	KHDC4 (ENSMMSG00000022609) #26	RIT1 (ENSMMSG00000004820) #27	SYT11 (ENSMMSG00000004948) #28	ENSMMSG00000005075 #29	ENSMMSG00000006603 #29	MSTO1 (ENSMMSG00000006647) #33	DAP3 (ENSMMSG00000006783) #31	ASH1L (ENSMMSG00000006966) #32	RUSC1 (ENSMMSG00000007079) #35	FDPS (ENSMMSG00000007131) #37	PKLR (ENSMMSG00000007243)	HCN3 (ENSMMSG00000007440)
Camelidae	ANCESTRAL SPECIES	6	ENSGT00940000159463	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Alpaca	MODERN SPECIES	418																UBQLN4 (ENSVPAG00000003406) #22	ENSVPAG00000003405 #24	KHDC4 (ENSVPAG00000003404) #26	RIT1 (ENSVPAG00000003403) #27	ENSVPAG00000003397 #29	ENSVPAG00000003395
Arabian camel	MODERN SPECIES	13	MEF2D (ENSCDRG00005012987)	RHBG (ENSCDRG00005012851) #7	TSACC (ENSCDRG00005012775) #8	CCT3 (ENSCDRG00005012596) #9	GLMP (ENSCDRG00005012477) #11	TMEM79 (ENSCDRG00005012417) #12	SMG5 (ENSCDRG00005012076) #13	PAQR6 (ENSCDRG00005011936) #14	BGLAP (ENSCDRG00005011888)	SLC25A44 (ENSCDRG00005011792) #15	SEMA4A (ENSCDRG00005011665) #16	LMNA (ENSCDRG00005011469) #18	MEX3A (ENSCDRG00005011401) #19	RAB25 (ENSCDRG00005011364) #20	LAMTOR2 (ENSCDRG00005011283) #21	UBQLN4 (ENSCDRG00005011159) #22	SSR2 (ENSCDRG00005010971) #23	ARHGEF2 (ENSCDRG00005010064) #24	RXFP4 (ENSCDRG00005009989)	ENSCDRG00005009887	RIT1 (ENSCDRG00005009734) #27	SYT11 (ENSCDRG00005009687) #28	MSTO1 (ENSCDRG00005009513) #33	ENSCDRG00005009473 #29	ENSCDRG00005009290 #29	DAP3 (ENSCDRG00005008986) #31	ENSCDRG00005008918	ASH1L (ENSCDRG00005008672) #32	RUSC1 (ENSCDRG00005008367) #35	FDPS (ENSCDRG00005008269) #37	PKLR (ENSCDRG00005008136)
Suina	ANCESTRAL SPECIES	8	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00980000200110	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Pig	MODERN SPECIES	12	RHBG (ENSSSCG00000035121) #7	TSACC (ENSSSCG00000006486) #8	CCT3 (ENSSSCG00000006487) #9	GLMP (ENSSSCG00000006488) #11	TMEM79 (ENSSSCG00000006489) #12	SMG5 (ENSSSCG00000006490) #13	PAQR6 (ENSSSCG00000006491) #14	BGLAP (ENSSSCG00000055767)	PMF1 (ENSSSCG00000052919)	SLC25A44 (ENSSSCG00000006494) #15	SEMA4A (ENSSSCG00000006495) #16	LMNA (ENSSSCG00000006496) #18	MEX3A (ENSSSCG00000006497) #19	RAB25 (ENSSSCG00000039186) #20	LAMTOR2 (ENSSSCG00000006499) #21	UBQLN4 (ENSSSCG00000006500) #22	SSR2 (ENSSSCG00000006501) #23	ARHGEF2 (ENSSSCG00000006502) #24	RXFP4 (ENSSSCG00000006503)	KHDC4 (ENSSSCG00000006504) #26	RIT1 (ENSSSCG00000023991) #27	SYT11 (ENSSSCG00000006506) #28	ENSSSCG00000006510 #29	MSTO1 (ENSSSCG00000006157) #33	DAP3 (ENSSSCG00000006507) #31	ASH1L (ENSSSCG00000006508) #32	ENSSSCG00000040632	RUSC1 (ENSSSCG00000006511) #35	FDPS (ENSSSCG00000006512) #37	PKLR (ENSSSCG00000026149)	HCN3 (ENSSSCG00000006518)
Chacoan peccary	MODERN SPECIES	139	RHBG (ENSCWAG00000010166) #7	TSACC (ENSCWAG00000010146) #8	CCT3 (ENSCWAG00000010037) #9	GLMP (ENSCWAG00000009920) #11	ENSCWAG00000009845	SMG5 (ENSCWAG00000009746) #13	PAQR6 (ENSCWAG00000009611) #14	BGLAP (ENSCWAG00000009559)	ENSCWAG00000009485	SLC25A44 (ENSCWAG00000009427) #15	SEMA4A (ENSCWAG00000009047) #16	LMNA (ENSCWAG00000008705) #18	MEX3A (ENSCWAG00000008643) #19	RAB25 (ENSCWAG00000008570) #20	LAMTOR2 (ENSCWAG00000008520) #21	UBQLN4 (ENSCWAG00000008403) #22	SSR2 (ENSCWAG00000008262) #23	ARHGEF2 (ENSCWAG00000007966) #24	ENSCWAG00000007912 #25	KHDC4 (ENSCWAG00000007841) #26	RIT1 (ENSCWAG00000020995) #27	SYT11 (ENSCWAG00000020979) #28	ENSCWAG00000020896 #29	MSTO1 (ENSCWAG00000020845) #33	DAP3 (ENSCWAG00000020775) #31	ENSCWAG00000020755	ASH1L (ENSCWAG00000020727) #32	RUSC1 (ENSCWAG00000020663) #35	FDPS (ENSCWAG00000020618) #37	PKLR (ENSCWAG00000020577)	HCN3 (ENSCWAG00000020562)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Carnivora	ANCESTRAL SPECIES	14	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Felidae	ANCESTRAL SPECIES	11	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Cat	MODERN SPECIES	248	RHBG (ENSFCAG00000011790) #7	TSACC (ENSFCAG00000029523) #8	CCT3 (ENSFCAG00000011789) #9	GLMP (ENSFCAG00000011788) #11	TMEM79 (ENSFCAG00000011787) #12	SMG5 (ENSFCAG00000011783) #13	PAQR6 (ENSFCAG00000000759) #14	BGLAP (ENSFCAG00000048978)	PMF1 (ENSFCAG00000011781)	SLC25A44 (ENSFCAG00000011780) #15	SEMA4A (ENSFCAG00000011779) #16	LMNA (ENSFCAG00000011776) #18	MEX3A (ENSFCAG00000044236) #19	RAB25 (ENSFCAG00000011775) #20	LAMTOR2 (ENSFCAG00000028596) #21	UBQLN4 (ENSFCAG00000011772) #22	ENSFCAG00000050566	SSR2 (ENSFCAG00000043703) #23	ARHGEF2 (ENSFCAG00000030294) #24	KHDC4 (ENSFCAG00000012137) #26	RIT1 (ENSFCAG00000044860) #27	ENSFCAG00000037260 #27	SYT11 (ENSFCAG00000029675) #28	ENSFCAG00000012133 #29	MSTO1 (ENSFCAG00000030966) #33	DAP3 (ENSFCAG00000022787) #31	ASH1L (ENSFCAG00000012088) #32	RUSC1 (ENSFCAG00000024900) #35	FDPS (ENSFCAG00000039350) #37	ENSFCAG00000047278	PKLR (ENSFCAG00000035883)
Panthera	ANCESTRAL SPECIES	38	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917	ENSGT00530000063335.B.a.a
Tiger	MODERN SPECIES	274	GPATCH4 (ENSPTIG00000006717)	NAXE (ENSPTIG00000009667)	TTC24 (ENSPTIG00000010925)	IQGAP3 (ENSPTIG00000013068)	RHBG (ENSPTIG00000015826) #7	TSACC (ENSPTIG00000016816) #8	CCT3 (ENSPTIG00000018610) #9	GLMP (ENSPTIG00000004054) #11	TMEM79 (ENSPTIG00000007414) #12	SMG5 (ENSPTIG00000007892) #13	SLC25A44 (ENSPTIG00000011099) #15	SEMA4A (ENSPTIG00000016788) #16	ENSPTIG00000021888 #18	RAB25 (ENSPTIG00000022049) #20	LAMTOR2 (ENSPTIG00000022068) #21	UBQLN4 (ENSPTIG00000022083) #22	SSR2 (ENSPTIG00000022102) #23	ENSPTIG00000001215 #24	KHDC4 (ENSPTIG00000004498) #26	RIT1 (ENSPTIG00000007045) #27	SYT11 (ENSPTIG00000007723) #28	ENSPTIG00000007985 #29	ENSPTIG00000013227 #29	DAP3 (ENSPTIG00000015443) #31	ASH1L (ENSPTIG00000019713) #32	ENSPTIG00000008406 #37	HCN3 (ENSPTIG00000009244)	CLK2 (ENSPTIG00000010873)	SCAMP3 (ENSPTIG00000011445)	ENSPTIG00000013508	GBA1 (ENSPTIG00000014359)
Panthera_a	ANCESTRAL SPECIES	37	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917	ENSGT00530000063335.B.a.a
leopard	MODERN SPECIES	138	CCT3 (ENSPPRG00000008924) #9	GLMP (ENSPPRG00000010044) #11	TMEM79 (ENSPPRG00000011226) #12	SMG5 (ENSPPRG00000011901) #13	ENSPPRG00000012440 #14	PAQR6 (ENSPPRG00000013590) #14	BGLAP (ENSPPRG00000013703)	ENSPPRG00000015181	ENSPPRG00000016604 #15	ENSPPRG00000017448 #15	SEMA4A (ENSPPRG00000024539) #16	LMNA (ENSPPRG00000003442) #18	MEX3A (ENSPPRG00000006585) #19	RAB25 (ENSPPRG00000006611) #20	LAMTOR2 (ENSPPRG00000007518) #21	UBQLN4 (ENSPPRG00000008090) #22	SSR2 (ENSPPRG00000009542) #23	ARHGEF2 (ENSPPRG00000018064) #24	KHDC4 (ENSPPRG00000021149) #26	RIT1 (ENSPPRG00000000399) #27	SYT11 (ENSPPRG00000000652) #28	ENSPPRG00000008799 #29	DAP3 (ENSPPRG00000011800) #31	ENSPPRG00000011971	ASH1L (ENSPPRG00000014648) #32	ENSPPRG00000015592 #35	FDPS (ENSPPRG00000017484) #37	PKLR (ENSPPRG00000019731)	HCN3 (ENSPPRG00000021359)	CLK2 (ENSPPRG00000023511)	SCAMP3 (ENSPPRG00000023077)
lion	MODERN SPECIES	44	RHBG (ENSPLOG00000006433) #7	TSACC (ENSPLOG00000006484) #8	CCT3 (ENSPLOG00000006587) #9	GLMP (ENSPLOG00000006693) #11	ENSPLOG00000006758	SMG5 (ENSPLOG00000006798) #13	PAQR6 (ENSPLOG00000006831) #14	BGLAP (ENSPLOG00000006890)	ENSPLOG00000006903	SLC25A44 (ENSPLOG00000006937) #15	SEMA4A (ENSPLOG00000006968) #16	LMNA (ENSPLOG00000007050) #18	MEX3A (ENSPLOG00000007367) #19	RAB25 (ENSPLOG00000007385) #20	LAMTOR2 (ENSPLOG00000007417) #21	UBQLN4 (ENSPLOG00000007496) #22	SSR2 (ENSPLOG00000007527) #23	ARHGEF2 (ENSPLOG00000007611) #24	KHDC4 (ENSPLOG00000007865) #26	RIT1 (ENSPLOG00000008053) #27	SYT11 (ENSPLOG00000008151) #28	ENSPLOG00000008203 #29	ENSPLOG00000008379 #31	ASH1L (ENSPLOG00000008458) #32	RUSC1 (ENSPLOG00000008579) #35	FDPS (ENSPLOG00000008651) #37	PKLR (ENSPLOG00000008753)	HCN3 (ENSPLOG00000008852)	CLK2 (ENSPLOG00000008926)	SCAMP3 (ENSPLOG00000009300)	ENTREP3 (ENSPLOG00000009450)
Caniformia	ANCESTRAL SPECIES	10	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Canidae	ANCESTRAL SPECIES	1	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917.f
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917.f
Dog	MODERN SPECIES	35	IQGAP3 (ENSCAFG00845008852)	MEF2D (ENSCAFG00845009027)	RHBG (ENSCAFG00845009336) #7	CCT3 (ENSCAFG00845009435) #9	GLMP (ENSCAFG00845009558) #11	TMEM79 (ENSCAFG00845009619) #12	PAQR6 (ENSCAFG00845009665) #14	SMG5 (ENSCAFG00845009772) #13	BGLAP (ENSCAFG00845009909)	SLC25A44 (ENSCAFG00845009963) #15	SEMA4A (ENSCAFG00845010023) #16	LMNA (ENSCAFG00845010163) #18	MEX3A (ENSCAFG00845010291) #19	RAB25 (ENSCAFG00845010319) #20	LAMTOR2 (ENSCAFG00845010372) #21	UBQLN4 (ENSCAFG00845010456) #22	SSR2 (ENSCAFG00845010530) #23	ARHGEF2 (ENSCAFG00845010726) #24	KHDC4 (ENSCAFG00845011090) #26	RIT1 (ENSCAFG00845011170) #27	SYT11 (ENSCAFG00845011235) #28	ENSCAFG00845011319 #29	MSTO1 (ENSCAFG00845011422) #33	DAP3 (ENSCAFG00845011528) #31	ASH1L (ENSCAFG00845011740) #32	RUSC1 (ENSCAFG00845011825) #35	FDPS (ENSCAFG00845011910) #37	PKLR (ENSCAFG00845012059)	HCN3 (ENSCAFG00845012249)	CLK2 (ENSCAFG00845012282)	SCAMP3 (ENSCAFG00845012373)
Dingo	MODERN SPECIES	271	RHBG (ENSCAFG00020005431) #7	TSACC (ENSCAFG00020005438) #8	CCT3 (ENSCAFG00020005487) #9	GLMP (ENSCAFG00020006053) #11	TMEM79 (ENSCAFG00020006056) #12	SMG5 (ENSCAFG00020006061) #13	PAQR6 (ENSCAFG00020006075) #14	BGLAP (ENSCAFG00020006091)	ENSCAFG00020006096	SLC25A44 (ENSCAFG00020006099) #15	SEMA4A (ENSCAFG00020006101) #16	LMNA (ENSCAFG00020006147) #18	MEX3A (ENSCAFG00020006171) #19	RAB25 (ENSCAFG00020006179) #20	ENSCAFG00020006183 #21	UBQLN4 (ENSCAFG00020006198) #22	SSR2 (ENSCAFG00020006268) #23	ARHGEF2 (ENSCAFG00020006291) #24	KHDC4 (ENSCAFG00020006317) #26	RIT1 (ENSCAFG00020006481) #27	SYT11 (ENSCAFG00020006484) #28	ENSCAFG00020006650 #29	MSTO1 (ENSCAFG00020006658) #33	DAP3 (ENSCAFG00020006662) #31	ASH1L (ENSCAFG00020006713) #32	ENSCAFG00020006949 #35	FDPS (ENSCAFG00020006959) #37	PKLR (ENSCAFG00020006996)	HCN3 (ENSCAFG00020007064)	CLK2 (ENSCAFG00020007098)	ENSCAFG00020007113
Red fox	MODERN SPECIES	23	ENSVVUG00000005925 #8	CCT3 (ENSVVUG00000005916) #9	GLMP (ENSVVUG00000005893) #11	TMEM79 (ENSVVUG00000005892) #12	SMG5 (ENSVVUG00000005887) #13	PAQR6 (ENSVVUG00000005883) #14	BGLAP (ENSVVUG00000005877)	ENSVVUG00000005870	SLC25A44 (ENSVVUG00000005863) #15	ENSVVUG00000005856 #16	ENSVVUG00000005853 #16	LMNA (ENSVVUG00000005843) #18	MEX3A (ENSVVUG00000005834) #19	RAB25 (ENSVVUG00000005821) #20	LAMTOR2 (ENSVVUG00000005816) #21	UBQLN4 (ENSVVUG00000005763) #22	SSR2 (ENSVVUG00000005756) #23	ARHGEF2 (ENSVVUG00000005746) #24	KHDC4 (ENSVVUG00000005679) #26	RIT1 (ENSVVUG00000005671) #27	SYT11 (ENSVVUG00000005667) #28	ENSVVUG00000004239 #29	MSTO1 (ENSVVUG00000004113) #33	DAP3 (ENSVVUG00000004090) #31	ASH1L (ENSVVUG00000004069) #32	RUSC1 (ENSVVUG00000004055) #35	FDPS (ENSVVUG00000004041) #37	PKLR (ENSVVUG00000003930)	HCN3 (ENSVVUG00000003915)	CLK2 (ENSVVUG00000003884)	FAM189B (ENSVVUG00000003865)
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Ursidae	ANCESTRAL SPECIES	4	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125.d #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.f #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.p #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Ursus	ANCESTRAL SPECIES	72															ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125.d #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256.f #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.p #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
American black bear	MODERN SPECIES	23															ENSUAMG00000015696 #21	UBQLN4 (ENSUAMG00000015695) #22	SSR2 (ENSUAMG00000015694) #23	ARHGEF2 (ENSUAMG00000013991) #24	KHDC4 (ENSUAMG00000013863) #26	RIT1 (ENSUAMG00000013852) #27	SYT11 (ENSUAMG00000013841) #28	ENSUAMG00000013830 #29	ENSUAMG00000013828 #29	ENSUAMG00000013824 #29	DAP3 (ENSUAMG00000013808) #31
Polar bear	MODERN SPECIES	200	IQGAP3 (ENSUMAG00000017820)	MEF2D (ENSUMAG00000017857)	RHBG (ENSUMAG00000017948) #7	TSACC (ENSUMAG00000017979) #8	CCT3 (ENSUMAG00000017983) #9	GLMP (ENSUMAG00000017987) #11	SMG5 (ENSUMAG00000018041) #13	ENSUMAG00000018331	BGLAP (ENSUMAG00000018334)	ENSUMAG00000018338	SLC25A44 (ENSUMAG00000018341) #15	SEMA4A (ENSUMAG00000018344) #16	LMNA (ENSUMAG00000018354) #18	RAB25 (ENSUMAG00000018376) #20	ENSUMAG00000018379	ENSUMAG00000018385 #22	SSR2 (ENSUMAG00000018391) #23	ARHGEF2 (ENSUMAG00000018398) #24	KHDC4 (ENSUMAG00000018427) #26	RIT1 (ENSUMAG00000018455) #27	SYT11 (ENSUMAG00000018466) #28	ENSUMAG00000018608 #29	MSTO1 (ENSUMAG00000019384) #33	DAP3 (ENSUMAG00000019443) #31	ENSUMAG00000019450 #32	ASH1L (ENSUMAG00000019455) #32	FDPS (ENSUMAG00000019468) #37	ENSUMAG00000019472	HCN3 (ENSUMAG00000019475)	CLK2 (ENSUMAG00000019495)	SCAMP3 (ENSUMAG00000019504)
Mustelinae	ANCESTRAL SPECIES	23	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074.m #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Ferret	MODERN SPECIES	441	RHBG (ENSMPUG00000004385) #7	TSACC (ENSMPUG00000004391) #8	CCT3 (ENSMPUG00000004401) #9	GLMP (ENSMPUG00000004537) #11	TMEM79 (ENSMPUG00000004531) #12	SMG5 (ENSMPUG00000004546) #13	PAQR6 (ENSMPUG00000004566) #14	BGLAP (ENSMPUG00000004628)	PMF1 (ENSMPUG00000004672)	SLC25A44 (ENSMPUG00000004717) #15	SEMA4A (ENSMPUG00000004742) #16	LMNA (ENSMPUG00000004761) #18	MEX3A (ENSMPUG00000004774) #19	RAB25 (ENSMPUG00000004790) #20	LAMTOR2 (ENSMPUG00000004826) #21	UBQLN4 (ENSMPUG00000004855) #22	SSR2 (ENSMPUG00000004963) #23	ARHGEF2 (ENSMPUG00000005016) #24	KHDC4 (ENSMPUG00000005186) #26	RIT1 (ENSMPUG00000005245) #27	SYT11 (ENSMPUG00000005268) #28	ENSMPUG00000005274 #29	MSTO1 (ENSMPUG00000005298) #33	DAP3 (ENSMPUG00000005314) #31	ASH1L (ENSMPUG00000005465) #32	ENSMPUG00000005484 #35	ENSMPUG00000005496 #37	PKLR (ENSMPUG00000005509)	HCN3 (ENSMPUG00000005526)	CLK2 (ENSMPUG00000005543)	ENTREP3 (ENSMPUG00000005565)
American mink	MODERN SPECIES	260	ENSNVIG00000020791	RHBG (ENSNVIG00000020780) #7	TSACC (ENSNVIG00000020774) #8	CCT3 (ENSNVIG00000020748) #9	GLMP (ENSNVIG00000020700) #11	ENSNVIG00000020679	SMG5 (ENSNVIG00000020654) #13	ENSNVIG00000020635 #14	BGLAP (ENSNVIG00000020619)	ENSNVIG00000020609	SLC25A44 (ENSNVIG00000020603) #15	SEMA4A (ENSNVIG00000020558) #16	LMNA (ENSNVIG00000020473) #18	RAB25 (ENSNVIG00000020433) #20	LAMTOR2 (ENSNVIG00000020427) #21	UBQLN4 (ENSNVIG00000020416) #22	SSR2 (ENSNVIG00000020385) #23	ARHGEF2 (ENSNVIG00000020356) #24	ENSNVIG00000020342 #26	RIT1 (ENSNVIG00000020272) #27	SYT11 (ENSNVIG00000020257) #28	ENSNVIG00000019964 #29	MSTO1 (ENSNVIG00000019933) #33	DAP3 (ENSNVIG00000019822) #31	ASH1L (ENSNVIG00000019642) #32	ENSNVIG00000019622 ##35	FDPS (ENSNVIG00000019613) #37	PKLR (ENSNVIG00000019507)	HCN3 (ENSNVIG00000019481)	CLK2 (ENSNVIG00000019445)	SCAMP3 (ENSNVIG00000019433)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Equus	ANCESTRAL SPECIES	3	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000164230	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947	ENSGT00940000160917
Horse	MODERN SPECIES	26	ENSECAG00000053296	MEF2D (ENSECAG00000020356)	RHBG (ENSECAG00000013494) #7	TSACC (ENSECAG00000020624) #8	CCT3 (ENSECAG00000020633) #9	GLMP (ENSECAG00000024928) #11	TMEM79 (ENSECAG00000001165) #12	SMG5 (ENSECAG00000001389) #13	ENSECAG00000005938	SLC25A44 (ENSECAG00000007577) #15	SEMA4A (ENSECAG00000008622) #16	LMNA (ENSECAG00000011097) #18	MEX3A (ENSECAG00000007279) #19	RAB25 (ENSECAG00000023191) #20	LAMTOR2 (ENSECAG00000009193) #21	UBQLN4 (ENSECAG00000009993) #22	SSR2 (ENSECAG00000013740) #23	ARHGEF2 (ENSECAG00000013759) #24	KHDC4 (ENSECAG00000011569) #26	RIT1 (ENSECAG00000015714) #27	ENSECAG00000019775 #29	SYT11 (ENSECAG00000019725) #28	MSTO1 (ENSECAG00000008798) #33	DAP3 (ENSECAG00000016401) #31	ENSECAG00000049880	ASH1L (ENSECAG00000018527) #32	RUSC1 (ENSECAG00000023262) #35	FDPS (ENSECAG00000039158) #37	PKLR (ENSECAG00000013836)	HCN3 (ENSECAG00000019972)	CLK2 (ENSECAG00000049239)
Donkey	MODERN SPECIES	17	MEF2D (ENSEASG00005019100)	RHBG (ENSEASG00005019109) #7	TSACC (ENSEASG00005019110) #8	CCT3 (ENSEASG00005019113) #9	GLMP (ENSEASG00005019116) #11	TMEM79 (ENSEASG00005019119) #12	SMG5 (ENSEASG00005019122) #13	PAQR6 (ENSEASG00005019125) #14	ENSEASG00005019127	SLC25A44 (ENSEASG00005019128) #15	SEMA4A (ENSEASG00005019129) #16	LMNA (ENSEASG00005019130) #18	MEX3A (ENSEASG00005031469) #19	RAB25 (ENSEASG00005019133) #20	LAMTOR2 (ENSEASG00005031172) #21	UBQLN4 (ENSEASG00005019135) #22	SSR2 (ENSEASG00005019136) #23	ARHGEF2 (ENSEASG00005019138) #24	KHDC4 (ENSEASG00005019143) #26	RIT1 (ENSEASG00005019149) #27	SYT11 (ENSEASG00005019151) #28	ENSEASG00005019154 #29	ENSEASG00005019163 #33	DAP3 (ENSEASG00005019165) #31	ENSEASG00005024932	ENSEASG00005019185 #32	ENSEASG00005010484	ENSEASG00005010486	ENSEASG00005030134	ENSEASG00005019246 #37	ENSEASG00005019243 #35
Chiroptera	ANCESTRAL SPECIES	20	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Megabat	MODERN SPECIES	3199													MEX3A (ENSPVAG00000010333) #19	RAB25 (ENSPVAG00000010331) #20	LAMTOR2 (ENSPVAG00000010328) #21	UBQLN4 (ENSPVAG00000010326) #22	SSR2 (ENSPVAG00000010325) #23	ARHGEF2 (ENSPVAG00000010324) #24	RXFP4 (ENSPVAG00000010323)	KHDC4 (ENSPVAG00000010322) #26	RIT1 (ENSPVAG00000010321) #27	SYT11 (ENSPVAG00000010320) #28	ENSPVAG00000010318 #29	ENSPVAG00000010316
Microchiroptera	ANCESTRAL SPECIES	21	ENSGT00950000182844.b.b.a #7	ENSGT00390000012524 #8	ENSGT00570000079224 #9	ENSGT00390000005131 #11	ENSGT00390000002390.b #12	ENSGT00940000154566 #13	ENSGT00940000160567 #14	ENSGT00410000026290	ENSGT00940000162656	ENSGT00940000155399 #15	ENSGT00940000161509 #16	ENSGT00940000157244 #18	ENSGT00940000161732 #19	ENSGT00940000158230 #20	ENSGT00390000006100 #21	ENSGT00940000155620 #22	ENSGT00390000005125 #23	ENSGT00940000158341 #24	ENSGT01030000234534.B.a.a.b	ENSGT00510000047412.a #26	ENSGT00940000160132 #27	ENSGT00940000159088 #28	ENSGT00390000016256 #29	ENSGT00530000064067 #33	ENSGT00390000015248 #31	ENSGT00940000156698 #32	ENSGT00900000141033.b.b #35	ENSGT00900000141074 #37	ENSGT00390000008859.b.c	ENSGT00940000162023	ENSGT00940000154947
Greater horseshoe bat	MODERN SPECIES	14	RHBG (ENSRFEG00010010915) #7	TSACC (ENSRFEG00010010848) #8	CCT3 (ENSRFEG00010010707) #9	GLMP (ENSRFEG00010016041) #11	TMEM79 (ENSRFEG00010015938) #12	SMG5 (ENSRFEG00010015872) #13	PAQR6 (ENSRFEG00010015723) #14	BGLAP (ENSRFEG00010015652)	PMF1 (ENSRFEG00010015555)	SLC25A44 (ENSRFEG00010015502) #15	SEMA4A (ENSRFEG00010015377) #16	LMNA (ENSRFEG00010015236) #18	MEX3A (ENSRFEG00010015157) #19	RAB25 (ENSRFEG00010015038) #20	ENSRFEG00010014949 #21	UBQLN4 (ENSRFEG00010014900) #22	SSR2 (ENSRFEG00010014692) #23	ARHGEF2 (ENSRFEG00010014408) #24	RXFP4 (ENSRFEG00010014369)	KHDC4 (ENSRFEG00010014273) #26	RIT1 (ENSRFEG00010014140) #27	SYT11 (ENSRFEG00010014057) #28	ENSRFEG00010013759 #29	MSTO1 (ENSRFEG00010013673) #33	DAP3 (ENSRFEG00010013351) #31	ASH1L (ENSRFEG00010013223) #32	RUSC1 (ENSRFEG00010013073) #35	FDPS (ENSRFEG00010012958) #37	PKLR (ENSRFEG00010012731)	HCN3 (ENSRFEG00010012686)	CLK2 (ENSRFEG00010012197)
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1610																ENSMLUG00000002182 #22	HSPA8 (ENSMLUG00000004834)	CLMP (ENSMLUG00000014150)
Microbat	MODERN SPECIES	1148	ENSMLUG00000030150	RHBG (ENSMLUG00000008585) #7	CCT3 (ENSMLUG00000015678) #9	GLMP (ENSMLUG00000008556) #11	TMEM79 (ENSMLUG00000008551) #12	SMG5 (ENSMLUG00000008518) #13	PAQR6 (ENSMLUG00000008500) #14	BGLAP (ENSMLUG00000029723)	PMF1 (ENSMLUG00000008489)	SLC25A44 (ENSMLUG00000008481) #15	SEMA4A (ENSMLUG00000000639) #16	LMNA (ENSMLUG00000026412) #18	MEX3A (ENSMLUG00000010185) #19	RAB25 (ENSMLUG00000010153) #20	ENSMLUG00000023871 #21	UBQLN4 (ENSMLUG00000010131) #22	SSR2 (ENSMLUG00000010102) #23	ARHGEF2 (ENSMLUG00000010039) #24	RXFP4 (ENSMLUG00000010023)	KHDC4 (ENSMLUG00000009967) #26	RIT1 (ENSMLUG00000009935) #27	SYT11 (ENSMLUG00000009918) #28	ENSMLUG00000009868 #29	MSTO1 (ENSMLUG00000009855) #33	DAP3 (ENSMLUG00000005848) #31	ASH1L (ENSMLUG00000013461) #32	RUSC1 (ENSMLUG00000013446) #35	PKLR (ENSMLUG00000013422)	HCN3 (ENSMLUG00000013418)	CLK2 (ENSMLUG00000013410)	SCAMP3 (ENSMLUG00000013402)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155620 #22
Hedgehog	MODERN SPECIES	5581																ENSEEUG00000013440 #22
Common shrew	MODERN SPECIES	4147																ENSSARG00000013420 #22