Theria ANCESTRAL SPECIES 5 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147 #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00940000173501 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Eutheria ANCESTRAL SPECIES 10 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Primates ANCESTRAL SPECIES 13 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Simiiformes ANCESTRAL SPECIES 15 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.F #10 ENSGT01100000263523.L ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Catarrhini ANCESTRAL SPECIES 16 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.F #10 ENSGT01100000263523.L ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 Hominoidea ANCESTRAL SPECIES 15 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.F #10 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 Gibbon MODERN SPECIES 14 ENSNLEG00000006205 #7 ENSNLEG00000006175 #8 ENSNLEG00000032978 #9 ENSNLEG00000034742 #10 PLEKHA3 (ENSNLEG00000006150) #11 FKBP7 (ENSNLEG00000006149) #12 PJVK (ENSNLEG00000006144) #13 ENSNLEG00000006120 #14 OSBPL6 (ENSNLEG00000006086) #15 RBM45 (ENSNLEG00000006080) #16 ENSNLEG00000030325 #17 PDE11A (ENSNLEG00000006056) #18 TTC30A (ENSNLEG00000030979) #19 TTC30B (ENSNLEG00000033307) #20 AGPS (ENSNLEG00000006030) #21 NFE2L2 (ENSNLEG00000006029) #22 HNRNPA3 (ENSNLEG00000028401) #23 ENSNLEG00000029348 #24 ENSNLEG00000035565 #25 MTX2 (ENSNLEG00000006020) #26 HOXD1 (ENSNLEG00000006019) #27 ENSNLEG00000027160 #28 HOXD3 (ENSNLEG00000006018) #29 HOXD4 (ENSNLEG00000006014) #30 ENSNLEG00000006003 #31 HOXD9 (ENSNLEG00000006011) #32 HOXD10 (ENSNLEG00000006010) #33 HOXD12 (ENSNLEG00000006006) #34 HOXD13 (ENSNLEG00000029303) #35 EVX2 (ENSNLEG00000005999) #36 LNPK (ENSNLEG00000005977) #37 Hominidae ANCESTRAL SPECIES 17 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 Pan ANCESTRAL SPECIES 12 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 Bonobo MODERN SPECIES 15 ENSPPAG00000026551 #7 ENSPPAG00000037260 #9 ENSPPAG00000034897 #8 PLEKHA3 (ENSPPAG00000036608) #11 FKBP7 (ENSPPAG00000043985) #12 PJVK (ENSPPAG00000037654) #13 PRKRA (ENSPPAG00000043306) ##14 OSBPL6 (ENSPPAG00000025663) #15 RBM45 (ENSPPAG00000026278) #16 ENSPPAG00000035494 ENSPPAG00000029280 #17 PDE11A (ENSPPAG00000036387) #18 TTC30A (ENSPPAG00000023829) #19 TTC30B (ENSPPAG00000019313) #20 AGPS (ENSPPAG00000036868) #21 NFE2L2 (ENSPPAG00000037501) #22 HNRNPA3 (ENSPPAG00000023768) #23 ENSPPAG00000012679 #25 MTX2 (ENSPPAG00000043265) #26 ENSPPAG00000025118 ENSPPAG00000031665 #27 ENSPPAG00000013988 #28 HOXD3 (ENSPPAG00000031713) #29 HOXD4 (ENSPPAG00000034992) #30 ENSPPAG00000034189 #31 HOXD9 (ENSPPAG00000039242) #32 HOXD10 (ENSPPAG00000036046) #33 ENSPPAG00000028125 HOXD12 (ENSPPAG00000017089) #34 ENSPPAG00000010483 #35 ENSPPAG00000039855 #36 Chimpanzee MODERN SPECIES 15 SESTD1 (ENSPTRG00000012695) CCDC141 (ENSPTRG00000012693) #7 TTN (ENSPTRG00000012691) #8 PLEKHA3 (ENSPTRG00000012690) #11 FKBP7 (ENSPTRG00000012689) #12 PJVK (ENSPTRG00000029126) #13 PRKRA (ENSPTRG00000012688) ##14 OSBPL6 (ENSPTRG00000012687) #15 RBM45 (ENSPTRG00000012686) #16 ENSPTRG00000051577 ENSPTRG00000046153 #17 PDE11A (ENSPTRG00000012684) #18 TTC30A (ENSPTRG00000044238) #19 TTC30B (ENSPTRG00000048299) #20 AGPS (ENSPTRG00000012680) #21 NFE2L2 (ENSPTRG00000012677) #22 HNRNPA3 (ENSPTRG00000012676) #23 ENSPTRG00000042815 #25 MTX2 (ENSPTRG00000012674) #26 ENSPTRG00000023851 HOXD1 (ENSPTRG00000052716) #27 ENSPTRG00000051348 #28 HOXD3 (ENSPTRG00000012672) #29 HOXD4 (ENSPTRG00000051862) #30 HOXD8 (ENSPTRG00000012669) #31 HOXD9 (ENSPTRG00000043464) #32 HOXD10 (ENSPTRG00000012667) #33 HOXD11 (ENSPTRG00000012666) HOXD12 (ENSPTRG00000012665) #34 HOXD13 (ENSPTRG00000012664) #35 EVX2 (ENSPTRG00000012663) #36 Human MODERN SPECIES 11 CWC22 (ENSG00000163510) ZNF385B (ENSG00000144331) SESTD1 (ENSG00000187231) CCDC141 (ENSG00000163492) #7 TTN (ENSG00000155657) #8 PLEKHA3 (ENSG00000116095) #11 FKBP7 (ENSG00000079150) #12 PJVK (ENSG00000204311) #13 PRKRA (ENSG00000180228) ##14 OSBPL6 (ENSG00000079156) #15 RBM45 (ENSG00000155636) #16 PDE11A (ENSG00000128655) #18 TTC30A (ENSG00000197557) #19 TTC30B (ENSG00000196659) #20 AGPS (ENSG00000018510) #21 NFE2L2 (ENSG00000116044) #22 HNRNPA3 (ENSG00000170144) #23 MTX2 (ENSG00000128654) #26 HOXD1 (ENSG00000128645) #27 HOXD4 (ENSG00000170166) #30 HOXD3 (ENSG00000128652) #29 HOXD8 (ENSG00000175879) #31 HOXD9 (ENSG00000128709) #32 HOXD10 (ENSG00000128710) #33 HOXD11 (ENSG00000128713) HOXD12 (ENSG00000170178) #34 HOXD13 (ENSG00000128714) #35 EVX2 (ENSG00000174279) #36 LNPK (ENSG00000144320) #37 ATP5MC3 (ENSG00000154518) ATF2 (ENSG00000115966) Gorilla MODERN SPECIES 15 SESTD1 (ENSGGOG00000000846) ENSGGOG00000014468 #7 TTN (ENSGGOG00000007919) #8 PLEKHA3 (ENSGGOG00000012980) #11 FKBP7 (ENSGGOG00000034906) #12 PJVK (ENSGGOG00000011071) #13 PRKRA (ENSGGOG00000005754) ##14 OSBPL6 (ENSGGOG00000008266) #15 RBM45 (ENSGGOG00000013981) #16 ENSGGOG00000040977 ENSGGOG00000040822 #17 PDE11A (ENSGGOG00000034968) #18 TTC30A (ENSGGOG00000009811) #19 AGPS (ENSGGOG00000012114) #21 ENSGGOG00000037000 NFE2L2 (ENSGGOG00000001231) #22 HNRNPA3 (ENSGGOG00000006130) #23 ENSGGOG00000043877 #25 ENSGGOG00000037084 MTX2 (ENSGGOG00000044125) #26 ENSGGOG00000040237 #35 ENSGGOG00000040635 #34 ENSGGOG00000041480 HOXD1 (ENSGGOG00000001348) #27 ENSGGOG00000037792 #28 HOXD3 (ENSGGOG00000037089) #29 HOXD4 (ENSGGOG00000042533) #30 ENSGGOG00000009898 #31 HOXD9 (ENSGGOG00000001343) #32 HOXD10 (ENSGGOG00000001341) #33 ENSGGOG00000044084 Orangutan MODERN SPECIES 15 CWC22 (ENSPPYG00000012986) ZNF385B (ENSPPYG00000012984) SESTD1 (ENSPPYG00000012982) CCDC141 (ENSPPYG00000012981) #7 TTN (ENSPPYG00000012980) #8 PLEKHA3 (ENSPPYG00000012979) #11 FKBP7 (ENSPPYG00000012978) #12 PJVK (ENSPPYG00000012977) #13 ENSPPYG00000012976 ##14 OSBPL6 (ENSPPYG00000012975) #15 RBM45 (ENSPPYG00000012974) #16 PDE11A (ENSPPYG00000012972) #18 TTC30A (ENSPPYG00000038583) #19 TTC30B (ENSPPYG00000034101) #20 AGPS (ENSPPYG00000012969) #21 NFE2L2 (ENSPPYG00000012968) #22 HNRNPA3 (ENSPPYG00000012967) ##23 MTX2 (ENSPPYG00000012966) #26 ENSPPYG00000037565 HOXD1 (ENSPPYG00000012964) #27 HOXD3 (ENSPPYG00000012963) #29 HOXD4 (ENSPPYG00000034536) #30 HOXD8 (ENSPPYG00000037201) #31 HOXD9 (ENSPPYG00000012959) #32 HOXD10 (ENSPPYG00000012958) #33 HOXD11 (ENSPPYG00000031598) HOXD12 (ENSPPYG00000012957) #34 HOXD13 (ENSPPYG00000012956) #35 EVX2 (ENSPPYG00000012955) #36 LNPK (ENSPPYG00000032630) #37 ATP5MC3 (ENSPPYG00000037033) Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00950000182922.a.a.a.b.a.a.b.b Macaca ANCESTRAL SPECIES 15 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000168702 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 Pig-tailed macaque MODERN SPECIES 585 PDE11A (ENSMNEG00000037080) #18 TTC30A (ENSMNEG00000000192) #19 TTC30B (ENSMNEG00000011632) #20 AGPS (ENSMNEG00000043672) #21 NFE2L2 (ENSMNEG00000028208) #22 ENSMNEG00000034936 ##23 ENSMNEG00000026533 #25 MTX2 (ENSMNEG00000032881) #26 HOXD1 (ENSMNEG00000010514) #27 ENSMNEG00000018849 #28 HOXD3 (ENSMNEG00000040202) #29 HOXD4 (ENSMNEG00000030845) #30 HOXD8 (ENSMNEG00000028133) #31 HOXD9 (ENSMNEG00000044938) #32 HOXD10 (ENSMNEG00000033923) #33 HOXD11 (ENSMNEG00000029127) HOXD12 (ENSMNEG00000002891) #34 HOXD13 (ENSMNEG00000027142) #35 EVX2 (ENSMNEG00000028323) #36 ENSMNEG00000024050 Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000168702 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00940000170471.B.a.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 Crab-eating macaque MODERN SPECIES 3 SESTD1 (ENSMFAG00000013388) CCDC141 (ENSMFAG00000000963) #7 ENSMFAG00000063214 #8 PLEKHA3 (ENSMFAG00000031192) #11 FKBP7 (ENSMFAG00000034329) #12 PJVK (ENSMFAG00000001249) #13 PRKRA (ENSMFAG00000040213) ##14 OSBPL6 (ENSMFAG00000003510) #15 ENSMFAG00000060300 RBM45 (ENSMFAG00000042524) #16 ENSMFAG00000034055 PDE11A (ENSMFAG00000042268) #18 TTC30A (ENSMFAG00000053112) #19 TTC30B (ENSMFAG00000057741) #20 AGPS (ENSMFAG00000038904) #21 NFE2L2 (ENSMFAG00000041108) #22 HNRNPA3 (ENSMFAG00000000823) #23 ENSMFAG00000058081 #25 ENSMFAG00000065500 MTX2 (ENSMFAG00000026822) #26 HOXD1 (ENSMFAG00000046035) #27 ENSMFAG00000047422 #28 HOXD3 (ENSMFAG00000034065) #29 HOXD4 (ENSMFAG00000052240) #30 HOXD8 (ENSMFAG00000065214) #31 HOXD9 (ENSMFAG00000000099) #32 HOXD10 (ENSMFAG00000031117) #33 ENSMFAG00000043724 HOXD12 (ENSMFAG00000051547) #34 HOXD13 (ENSMFAG00000033237) #35 ENSMFAG00000053875 Rhesus MODERN SPECIES 3 ZNF385B (ENSMMUG00000003855) SESTD1 (ENSMMUG00000019690) ENSMMUG00000019689 #7 TTN (ENSMMUG00000009038) #8 PLEKHA3 (ENSMMUG00000002189) #11 FKBP7 (ENSMMUG00000002187) #12 PJVK (ENSMMUG00000054264) #13 PRKRA (ENSMMUG00000002185) ##14 OSBPL6 (ENSMMUG00000002183) #15 RBM45 (ENSMMUG00000002013) #16 PDE11A (ENSMMUG00000002011) #18 TTC30A (ENSMMUG00000041827) #19 TTC30B (ENSMMUG00000043597) #20 AGPS (ENSMMUG00000008502) #21 ENSMMUG00000065205 NFE2L2 (ENSMMUG00000001861) #22 HNRNPA3 (ENSMMUG00000001858) #23 ENSMMUG00000062299 #25 ENSMMUG00000054983 ENSMMUG00000031367 MTX2 (ENSMMUG00000010185) #26 HOXD1 (ENSMMUG00000065344) #27 ENSMMUG00000052177 #28 HOXD3 (ENSMMUG00000051761) #29 HOXD4 (ENSMMUG00000060947) #30 HOXD8 (ENSMMUG00000023504) #31 HOXD9 (ENSMMUG00000032599) #32 HOXD10 (ENSMMUG00000046368) #33 HOXD11 (ENSMMUG00000047915) HOXD12 (ENSMMUG00000023501) #34 HOXD13 (ENSMMUG00000055831) #35 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00950000182922.a.a.a.b.a.a.b.b Olive baboon MODERN SPECIES 1 SESTD1 (ENSPANG00000020529) CCDC141 (ENSPANG00000006772) #7 TTN (ENSPANG00000022292) #8 PLEKHA3 (ENSPANG00000013332) #11 FKBP7 (ENSPANG00000019540) #12 PJVK (ENSPANG00000014211) #13 PRKRA (ENSPANG00000001046) ##14 OSBPL6 (ENSPANG00000016378) #15 ENSPANG00000046096 RBM45 (ENSPANG00000016088) #16 ENSPANG00000029672 PDE11A (ENSPANG00000025222) #18 TTC30A (ENSPANG00000041839) #19 TTC30B (ENSPANG00000046724) #20 AGPS (ENSPANG00000004764) #21 NFE2L2 (ENSPANG00000039361) #22 ENSPANG00000018337 #23 ENSPANG00000045287 MTX2 (ENSPANG00000013333) #26 HOXD1 (ENSPANG00000009593) #27 HOXD3 (ENSPANG00000000543) #29 HOXD4 (ENSPANG00000000542) #30 HOXD8 (ENSPANG00000049199) #31 HOXD9 (ENSPANG00000001061) #32 HOXD10 (ENSPANG00000050198) #33 HOXD11 (ENSPANG00000049530) ENSPANG00000044332 #34 ENSPANG00000044695 #35 ENSPANG00000039545 #36 LNPK (ENSPANG00000011787) #37 ATP5MC3 (ENSPANG00000031591) Cercopithecinae_d ANCESTRAL SPECIES ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00390000010116.jb #20 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00910000147200 #25 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00910000147400 #28 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00950000182922.a.a.a.b.a.a.b.b Sooty mangabey MODERN SPECIES 570 SESTD1 (ENSCATG00000024404) CCDC141 (ENSCATG00000030397) #7 TTN (ENSCATG00000041967) #8 PLEKHA3 (ENSCATG00000038850) #11 FKBP7 (ENSCATG00000037065) #12 PJVK (ENSCATG00000035539) #13 PRKRA (ENSCATG00000032736) ##14 OSBPL6 (ENSCATG00000040355) #15 RBM45 (ENSCATG00000041082) #16 ENSCATG00000039319 ENSCATG00000008317 #17 PDE11A (ENSCATG00000042325) #18 TTC30A (ENSCATG00000000123) #19 TTC30B (ENSCATG00000004635) #20 AGPS (ENSCATG00000038387) #21 NFE2L2 (ENSCATG00000036834) #22 ENSCATG00000001855 HNRNPA3 (ENSCATG00000032162) #23 ENSCATG00000022731 #25 MTX2 (ENSCATG00000039959) #26 HOXD1 (ENSCATG00000032397) #27 ENSCATG00000032250 #28 HOXD3 (ENSCATG00000029355) #29 HOXD4 (ENSCATG00000041719) #30 HOXD8 (ENSCATG00000032148) #31 HOXD9 (ENSCATG00000037190) #32 HOXD11 (ENSCATG00000031157) HOXD10 (ENSCATG00000032256) #33 HOXD12 (ENSCATG00000032043) #34 HOXD13 (ENSCATG00000031889) #35 EVX2 (ENSCATG00000038250) #36 Drill MODERN SPECIES 1072 ENSMLEG00000034299 ##8 PLEKHA3 (ENSMLEG00000030446) #11 FKBP7 (ENSMLEG00000015651) #12 PJVK (ENSMLEG00000027972) #13 PRKRA (ENSMLEG00000019578) ##14 OSBPL6 (ENSMLEG00000021439) #15 RBM45 (ENSMLEG00000042404) #16 PDE11A (ENSMLEG00000044286) #18 ENSMLEG00000035955 ENSMLEG00000039892 TTC30A (ENSMLEG00000027775) #19 TTC30B (ENSMLEG00000027894) #20 AGPS (ENSMLEG00000033858) #21 NFE2L2 (ENSMLEG00000042705) #22 MTX2 (ENSMLEG00000002029) #26 HOXD1 (ENSMLEG00000035890) #27 HOXD3 (ENSMLEG00000037278) #29 HOXD4 (ENSMLEG00000024188) #30 ENSMLEG00000042507 #31 HOXD9 (ENSMLEG00000025695) #32 HOXD10 (ENSMLEG00000044067) #33 ENSMLEG00000030792 HOXD12 (ENSMLEG00000032533) #34 HOXD13 (ENSMLEG00000031532) #35 EVX2 (ENSMLEG00000035528) #36 LNPK (ENSMLEG00000033659) #37 ENSMLEG00000001270 ATP5MC3 (ENSMLEG00000043816) ATF2 (ENSMLEG00000035167) Vervet Monkey MODERN SPECIES 1 UBE2E3 (ENSCSAG00000012910) CWC22 (ENSCSAG00000012925) ZNF385B (ENSCSAG00000012932) SESTD1 (ENSCSAG00000012944) CCDC141 (ENSCSAG00000012957) #7 TTN (ENSCSAG00000013817) #8 PLEKHA3 (ENSCSAG00000014182) #11 FKBP7 (ENSCSAG00000014194) #12 PJVK (ENSCSAG00000014212) #13 OSBPL6 (ENSCSAG00000014221) #15 RBM45 (ENSCSAG00000014231) #16 ENSCSAG00000014240 PDE11A (ENSCSAG00000014313) #18 TTC30A (ENSCSAG00000018651) #19 AGPS (ENSCSAG00000014345) #21 NFE2L2 (ENSCSAG00000014353) #22 ENSCSAG00000014399 #23 MTX2 (ENSCSAG00000014412) #26 HOXD1 (ENSCSAG00000014419) #27 HOXD3 (ENSCSAG00000014422) #29 HOXD4 (ENSCSAG00000014429) #30 HOXD8 (ENSCSAG00000014437) #31 HOXD9 (ENSCSAG00000014441) #32 HOXD10 (ENSCSAG00000014448) #33 HOXD11 (ENSCSAG00000014457) HOXD12 (ENSCSAG00000014464) #34 HOXD13 (ENSCSAG00000014475) #35 EVX2 (ENSCSAG00000014486) #36 LNPK (ENSCSAG00000014506) #37 ATF2 (ENSCSAG00000014523) CHN1 (ENSCSAG00000014539) Rhinopithecus ANCESTRAL SPECIES 148 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618.o.b ##14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000168702 ENSGT00910000148248 ENSGT00390000010991.f.b #17 ENSGT00940000162151 #18 ENSGT00390000010116.kb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00960000186717.a ENSGT00940000154301.`b.a ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 Golden snub-nosed monkey MODERN SPECIES 722 CWC22 (ENSRROG00000037520) ZNF385B (ENSRROG00000003706) SESTD1 (ENSRROG00000029348) CCDC141 (ENSRROG00000037411) #7 TTN (ENSRROG00000045525) #8 PLEKHA3 (ENSRROG00000041107) #11 FKBP7 (ENSRROG00000020947) #12 PJVK (ENSRROG00000007464) #13 PRKRA (ENSRROG00000035389) ##14 OSBPL6 (ENSRROG00000036096) #15 RBM45 (ENSRROG00000031398) #16 ENSRROG00000041594 #17 PDE11A (ENSRROG00000028809) #18 TTC30A (ENSRROG00000023478) #19 AGPS (ENSRROG00000035068) #21 NFE2L2 (ENSRROG00000045317) #22 ENSRROG00000028794 #23 MTX2 (ENSRROG00000030249) #26 ENSRROG00000020854 ENSRROG00000042876 ENSRROG00000038369 HOXD1 (ENSRROG00000035364) #27 HOXD3 (ENSRROG00000044509) #29 HOXD4 (ENSRROG00000026646) #30 ENSRROG00000024611 #31 HOXD10 (ENSRROG00000036162) #33 HOXD9 (ENSRROG00000032216) #32 ENSRROG00000043226 HOXD12 (ENSRROG00000043268) #34 HOXD13 (ENSRROG00000040419) #35 EVX2 (ENSRROG00000044705) #36 Black snub-nosed monkey MODERN SPECIES 241 ENSRBIG00000043799 #8 ENSRBIG00000037878 #9 ENSRBIG00000029254 #8 PLEKHA3 (ENSRBIG00000003168) #11 FKBP7 (ENSRBIG00000040596) #12 PJVK (ENSRBIG00000034251) #13 ENSRBIG00000014635 PRKRA (ENSRBIG00000035301) ##14 OSBPL6 (ENSRBIG00000040280) #15 RBM45 (ENSRBIG00000033680) #16 PDE11A (ENSRBIG00000043623) #18 ENSRBIG00000035583 ENSRBIG00000030274 TTC30A (ENSRBIG00000041155) #19 AGPS (ENSRBIG00000039582) #21 NFE2L2 (ENSRBIG00000042825) #22 ENSRBIG00000012615 ##23 MTX2 (ENSRBIG00000043097) #26 ENSRBIG00000042767 ENSRBIG00000032024 HOXD1 (ENSRBIG00000031297) #27 HOXD3 (ENSRBIG00000044829) #29 HOXD4 (ENSRBIG00000027637) #30 HOXD8 (ENSRBIG00000036417) #31 HOXD9 (ENSRBIG00000035340) #32 HOXD10 (ENSRBIG00000030470) #33 HOXD12 (ENSRBIG00000040792) #34 ENSRBIG00000035253 HOXD13 (ENSRBIG00000033719) #35 LNPK (ENSRBIG00000038235) #37 ENSRBIG00000038159 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116.mb #19 ENSGT00390000010116.lb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Cebidae ANCESTRAL SPECIES 11 ENSGT00940000155611.s ENSGT00730000111148.s ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116.mb #19 ENSGT00390000010116.lb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Cebidae_a ANCESTRAL SPECIES 27 ENSGT00940000155611.s ENSGT00730000111148.s ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116.mb #19 ENSGT00390000010116.lb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Capuchin MODERN SPECIES 78 ZNF385B (ENSCCAG00000036046) SESTD1 (ENSCCAG00000035636) CCDC141 (ENSCCAG00000022986) #7 ENSCCAG00000031194 #9 TTN (ENSCCAG00000034292) #8 PLEKHA3 (ENSCCAG00000021212) #11 FKBP7 (ENSCCAG00000023204) #12 PJVK (ENSCCAG00000036547) #13 PRKRA (ENSCCAG00000024400) #14 OSBPL6 (ENSCCAG00000034516) #15 RBM45 (ENSCCAG00000022783) #16 PDE11A (ENSCCAG00000023473) #18 ENSCCAG00000011267 #19 ENSCCAG00000002151 #19 AGPS (ENSCCAG00000012654) #21 NFE2L2 (ENSCCAG00000033992) #22 ENSCCAG00000032029 #25 ENSCCAG00000020064 Bolivian squirrel monkey MODERN SPECIES 46 SESTD1 (ENSSBOG00000028940) CCDC141 (ENSSBOG00000020873) #7 TTN (ENSSBOG00000021641) #8 ENSSBOG00000032089 #9 PLEKHA3 (ENSSBOG00000030061) #11 FKBP7 (ENSSBOG00000029794) #12 PJVK (ENSSBOG00000022982) #13 PRKRA (ENSSBOG00000012105) #14 ENSSBOG00000035006 OSBPL6 (ENSSBOG00000020436) #15 RBM45 (ENSSBOG00000005469) #16 PDE11A (ENSSBOG00000026746) #18 ENSSBOG00000018055 #19 ENSSBOG00000019156 #19 AGPS (ENSSBOG00000026720) #21 NFE2L2 (ENSSBOG00000022740) #22 HNRNPA3 (ENSSBOG00000034307) #23 MTX2 (ENSSBOG00000025795) #26 HOXD1 (ENSSBOG00000030906) #27 HOXD3 (ENSSBOG00000031894) #29 HOXD4 (ENSSBOG00000031535) #30 ENSSBOG00000029405 #31 HOXD9 (ENSSBOG00000031095) #32 HOXD10 (ENSSBOG00000020553) #33 HOXD12 (ENSSBOG00000025723) #34 HOXD13 (ENSSBOG00000032579) #35 EVX2 (ENSSBOG00000034364) #36 LNPK (ENSSBOG00000023054) #37 ATP5MC3 (ENSSBOG00000022688) ATF2 (ENSSBOG00000025461) CHN1 (ENSSBOG00000016307) Marmoset MODERN SPECIES 18 PLEKHA3 (ENSCJAG00000045213) #11 ENSCJAG00000021525 #9 CCDC141 (ENSCJAG00000032110) #7 SESTD1 (ENSCJAG00000021532) ZNF385B (ENSCJAG00000021534) ENSCJAG00000084427 ENSCJAG00000047313 ENSCJAG00000072241 ENSCJAG00000021516 #16 PDE11A (ENSCJAG00000014554) #18 ENSCJAG00000081742 ENSCJAG00000081808 AGPS (ENSCJAG00000021508) #21 ENSCJAG00000021732 #19 ENSCJAG00000059559 NFE2L2 (ENSCJAG00000008340) #22 ENSCJAG00000006928 #23 ENSCJAG00000072603 MTX2 (ENSCJAG00000039174) #26 HOXD1 (ENSCJAG00000008290) #27 HOXD3 (ENSCJAG00000063715) #29 HOXD4 (ENSCJAG00000008286) #30 HOXD8 (ENSCJAG00000008284) #31 HOXD9 (ENSCJAG00000046789) #32 HOXD10 (ENSCJAG00000008269) #33 HOXD11 (ENSCJAG00000048503) HOXD12 (ENSCJAG00000079626) #34 HOXD13 (ENSCJAG00000040882) #35 EVX2 (ENSCJAG00000077487) #36 LNPK (ENSCJAG00000008226) #37 ENSCJAG00000022954 Mas night monkey MODERN SPECIES 1333 ENSANAG00000025414 #18 ENSANAG00000003240 #19 AGPS (ENSANAG00000019626) #21 NFE2L2 (ENSANAG00000023669) #22 HNRNPA3 (ENSANAG00000002931) #23 MTX2 (ENSANAG00000022501) #26 ENSANAG00000031061 HOXD1 (ENSANAG00000019775) #27 HOXD3 (ENSANAG00000026428) #29 HOXD4 (ENSANAG00000028028) #30 HOXD8 (ENSANAG00000026980) #31 HOXD9 (ENSANAG00000024699) #32 HOXD10 (ENSANAG00000025381) #33 HOXD11 (ENSANAG00000029678) HOXD12 (ENSANAG00000008919) #34 HOXD13 (ENSANAG00000029500) #35 EVX2 (ENSANAG00000031929) #36 LNPK (ENSANAG00000019161) #37 ENSANAG00000021797 Tarsier MODERN SPECIES 1208 NFE2L2 (ENSTSYG00000000155) #22 HNRNPA3 (ENSTSYG00000026299) #23 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT01100000263532.A.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.B ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000164264 ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.B ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Mouse lemur MODERN SPECIES 30 ENSMICG00000030550 #8 ENSMICG00000043822 #9 ENSMICG00000031280 ##8 ENSMICG00000009898 #11 FKBP7 (ENSMICG00000044765) #12 PJVK (ENSMICG00000028765) #13 PRKRA (ENSMICG00000009883) #14 OSBPL6 (ENSMICG00000003793) #15 RBM45 (ENSMICG00000003787) #16 ENSMICG00000047030 PDE11A (ENSMICG00000003770) #18 ENSMICG00000030225 ENSMICG00000046051 #19 ENSMICG00000003768 #19 AGPS (ENSMICG00000003750) #21 NFE2L2 (ENSMICG00000009559) #22 ENSMICG00000027841 ##23 MTX2 (ENSMICG00000004295) #26 HOXD1 (ENSMICG00000044650) #27 HOXD3 (ENSMICG00000004286) #29 HOXD4 (ENSMICG00000043209) #30 HOXD8 (ENSMICG00000004277) #31 HOXD9 (ENSMICG00000031229) #32 HOXD10 (ENSMICG00000028373) #33 HOXD11 (ENSMICG00000048033) HOXD12 (ENSMICG00000002172) #34 HOXD13 (ENSMICG00000002170) #35 EVX2 (ENSMICG00000035343) #36 LNPK (ENSMICG00000027707) #37 ATP5MC3 (ENSMICG00000006421) ATF2 (ENSMICG00000006417) Lemuriformes_a ANCESTRAL SPECIES 69 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Greater bamboo lemur MODERN SPECIES 315 SESTD1 (ENSPSMG00000006407) CCDC141 (ENSPSMG00000006422) #7 TTN (ENSPSMG00000006740) #8 ENSPSMG00000006846 ##9 ENSPSMG00000006848 #9 PLEKHA3 (ENSPSMG00000006866) #11 FKBP7 (ENSPSMG00000006879) #12 PJVK (ENSPSMG00000006888) #13 PRKRA (ENSPSMG00000006915) #14 OSBPL6 (ENSPSMG00000007245) #15 RBM45 (ENSPSMG00000007558) #16 ENSPSMG00000007568 PDE11A (ENSPSMG00000007629) #18 ENSPSMG00000007645 #19 AGPS (ENSPSMG00000007683) #21 NFE2L2 (ENSPSMG00000007760) #22 ENSPSMG00000007769 ##23 TRIM37 (ENSPSMG00000008046) ENSPSMG00000008167 ENSPSMG00000008202 Coquerels sifaka MODERN SPECIES 478 CCDC141 (ENSPCOG00000001783) #7 ENSPCOG00000025904 #8 ENSPCOG00000024634 #9 ENSPCOG00000021252 #8 PLEKHA3 (ENSPCOG00000020560) #11 FKBP7 (ENSPCOG00000018941) #12 PJVK (ENSPCOG00000022935) #13 PRKRA (ENSPCOG00000018812) #14 OSBPL6 (ENSPCOG00000010731) #15 ENSPCOG00000005659 RBM45 (ENSPCOG00000021526) #16 ENSPCOG00000028806 ENSPCOG00000025842 PDE11A (ENSPCOG00000025830) #18 AGPS (ENSPCOG00000018665) #21 NFE2L2 (ENSPCOG00000007362) #22 MTX2 (ENSPCOG00000025077) #26 HOXD1 (ENSPCOG00000024445) #27 HOXD3 (ENSPCOG00000017195) #29 HOXD4 (ENSPCOG00000018337) #30 HOXD8 (ENSPCOG00000024233) #31 HOXD9 (ENSPCOG00000026809) #32 HOXD10 (ENSPCOG00000023637) #33 HOXD11 (ENSPCOG00000015055) HOXD12 (ENSPCOG00000022036) #34 HOXD13 (ENSPCOG00000018735) #35 EVX2 (ENSPCOG00000022416) #36 LNPK (ENSPCOG00000026983) #37 ATP5MC3 (ENSPCOG00000016374) ATF2 (ENSPCOG00000025416) CHN1 (ENSPCOG00000018830) Bushbaby MODERN SPECIES 163 ZNF385B (ENSOGAG00000008520) SESTD1 (ENSOGAG00000011106) CCDC141 (ENSOGAG00000003186) #7 ENSOGAG00000025603 #8 ENSOGAG00000029563 ##9 PLEKHA3 (ENSOGAG00000002724) #11 FKBP7 (ENSOGAG00000002721) #12 PJVK (ENSOGAG00000033780) #13 PRKRA (ENSOGAG00000013971) #14 OSBPL6 (ENSOGAG00000013765) #15 RBM45 (ENSOGAG00000015195) #16 ENSOGAG00000026648 ENSOGAG00000013191 ENSOGAG00000013189 #19 AGPS (ENSOGAG00000013184) #21 NFE2L2 (ENSOGAG00000034393) #22 ENSOGAG00000028132 ##23 ENSOGAG00000032690 MTX2 (ENSOGAG00000016422) #26 HOXD1 (ENSOGAG00000015712) #27 HOXD3 (ENSOGAG00000015710) #29 HOXD4 (ENSOGAG00000029168) #30 HOXD8 (ENSOGAG00000015707) #31 HOXD9 (ENSOGAG00000015697) #32 HOXD10 (ENSOGAG00000015694) #33 HOXD11 (ENSOGAG00000029520) HOXD12 (ENSOGAG00000015689) #34 HOXD13 (ENSOGAG00000027055) #35 EVX2 (ENSOGAG00000025378) #36 LNPK (ENSOGAG00000030372) #37 ENSOGAG00000030354 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Tree shrew MODERN SPECIES 650 NFE2L2 (ENSTBEG00000001588) #22 Glires ANCESTRAL SPECIES 14 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Lagomorpha ANCESTRAL SPECIES 12 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.B ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.K ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00940000164264 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Rabbit MODERN SPECIES 18 ENSOCUG00000035152 #9 ENSOCUG00000033996 ##8 ENSOCUG00000016777 ##8 PLEKHA3 (ENSOCUG00000005495) #11 FKBP7 (ENSOCUG00000024679) #12 PJVK (ENSOCUG00000005493) #13 PRKRA (ENSOCUG00000005489) #14 OSBPL6 (ENSOCUG00000004078) #15 RBM45 (ENSOCUG00000001125) #16 ENSOCUG00000025342 ENSOCUG00000039559 ENSOCUG00000008038 ENSOCUG00000039012 #19 ENSOCUG00000029884 #19 AGPS (ENSOCUG00000011521) #21 NFE2L2 (ENSOCUG00000001009) #22 ENSOCUG00000002743 #23 ENSOCUG00000030456 ENSOCUG00000025666 MTX2 (ENSOCUG00000008760) #26 HOXD1 (ENSOCUG00000015582) #27 HOXD3 (ENSOCUG00000014119) #29 HOXD4 (ENSOCUG00000002413) #30 ENSOCUG00000035940 #31 HOXD9 (ENSOCUG00000023956) #32 HOXD10 (ENSOCUG00000008964) #33 HOXD11 (ENSOCUG00000013942) HOXD12 (ENSOCUG00000002412) #34 HOXD13 (ENSOCUG00000029547) #35 EVX2 (ENSOCUG00000032776) #36 LNPK (ENSOCUG00000008962) #37 Pika MODERN SPECIES 6647 GUCA1A (ENSOPRG00000013964) GUCA1ANB (ENSOPRG00000018852) TAF8 (ENSOPRG00000013945) NFE2L2 (ENSOPRG00000013934) #22 Rodentia ANCESTRAL SPECIES 14 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Rodentia_B ANCESTRAL SPECIES 12 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.B ##8 ENSGT01100000263523.A #8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Myomorpha ANCESTRAL SPECIES 10 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT01100000263523.B ##8 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Muroidea ANCESTRAL SPECIES 34 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT01100000263523.B ##8 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Muroidea_A ANCESTRAL SPECIES 2 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Cricetidae ANCESTRAL SPECIES 12 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Cricetinae ANCESTRAL SPECIES 1 ENSGT00900000143159 ENSGT01100000263523.B ##8 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p #23 ENSGT00940000154808.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Chinese hamster chok1gshd MODERN SPECIES 188 ENSCGRG00001011105 #8 ENSCGRG00001011823 ENSCGRG00001001535 ##9 Plekha3 (ENSCGRG00001002827) #11 Fkbp7 (ENSCGRG00001004871) #12 Pjvk (ENSCGRG00001006219) #13 Prkra (ENSCGRG00001009200) #14 Osbpl6 (ENSCGRG00001002669) #15 Rbm45 (ENSCGRG00001005759) #16 Cyct (ENSCGRG00001008096) Pde11a (ENSCGRG00001011422) #18 ENSCGRG00001003072 Ttc30a1 (ENSCGRG00001000892) #19 Ttc30b (ENSCGRG00001002157) #19 Agps (ENSCGRG00001003863) #21 Nfe2l2 (ENSCGRG00001005715) #22 ENSCGRG00001008592 #23 ENSCGRG00001003235 Mtx2 (ENSCGRG00001014247) #26 ENSCGRG00001014512 Hoxd1 (ENSCGRG00001011572) #27 Hoxd3 (ENSCGRG00001011863) #29 Hoxd4 (ENSCGRG00001012360) #30 Hoxd8 (ENSCGRG00001013130) #31 Hoxd9 (ENSCGRG00001005991) #32 Hoxd10 (ENSCGRG00001008302) #33 Hoxd11 (ENSCGRG00001010386) Hoxd12 (ENSCGRG00001000877) #34 Hoxd13 (ENSCGRG00001001661) #35 Evx2 (ENSCGRG00001003649) #36 ENSCGRG00001006802 Golden Hamster MODERN SPECIES 618 ENSMAUG00000001413 ENSMAUG00000016510 #8 ENSMAUG00000018214 ##8 ENSMAUG00000018562 ENSMAUG00000019513 ENSMAUG00000018786 ##9 Plekha3 (ENSMAUG00000019341) #11 Fkbp7 (ENSMAUG00000016606) #12 Pjvk (ENSMAUG00000018018) #13 Prkra (ENSMAUG00000019631) #14 Osbpl6 (ENSMAUG00000018609) #15 Rbm45 (ENSMAUG00000016948) #16 Cyct (ENSMAUG00000016722) Pde11a (ENSMAUG00000021257) #18 Agps (ENSMAUG00000017317) #21 Nfe2l2 (ENSMAUG00000017700) #22 ENSMAUG00000017462 Mtx2 (ENSMAUG00000017870) #26 Hoxd1 (ENSMAUG00000018401) #27 Hoxd3 (ENSMAUG00000018318) #29 Hoxd4 (ENSMAUG00000018545) #30 Hoxd8 (ENSMAUG00000018092) #31 Hoxd9 (ENSMAUG00000018538) #32 Hoxd10 (ENSMAUG00000016731) #33 ENSMAUG00000020249 Hoxd12 (ENSMAUG00000018416) #34 Hoxd13 (ENSMAUG00000017185) #35 Evx2 (ENSMAUG00000020383) #36 Lnpk (ENSMAUG00000018821) #37 ENSMAUG00000020495 Atp5g3 (ENSMAUG00000017685) Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00900000143154 ENSGT01100000263523.A #8 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Prairie vole MODERN SPECIES 12 ENSMOCG00000017985 ENSMOCG00000017796 ##8 ENSMOCG00000015811 ##9 Plekha3 (ENSMOCG00000004146) #11 Fkbp7 (ENSMOCG00000008125) #12 Pjvk (ENSMOCG00000006830) #13 Prkra (ENSMOCG00000004548) #14 Osbpl6 (ENSMOCG00000017155) #15 Rbm45 (ENSMOCG00000017295) #16 Cyct (ENSMOCG00000021506) Pde11a (ENSMOCG00000005959) #18 Ttc30a2 (ENSMOCG00000002802) #19 ENSMOCG00000001098 Ttc30b (ENSMOCG00000001580) #19 Agps (ENSMOCG00000017476) #21 Nfe2l2 (ENSMOCG00000020760) #22 ENSMOCG00000019409 ##23 Mtx2 (ENSMOCG00000017110) #26 Hoxd1 (ENSMOCG00000014086) #27 Hoxd4 (ENSMOCG00000013646) #30 Hoxd3 (ENSMOCG00000022552) #29 Hoxd8 (ENSMOCG00000022746) #31 Hoxd9 (ENSMOCG00000005870) #32 Hoxd10 (ENSMOCG00000006052) #33 Hoxd11 (ENSMOCG00000019226) Hoxd12 (ENSMOCG00000018953) #34 Hoxd13 (ENSMOCG00000014618) #35 Evx2 (ENSMOCG00000010466) #36 Lnpk (ENSMOCG00000022345) #37 ENSMOCG00000012786 Atf2 (ENSMOCG00000015301) Northern American deer mouse MODERN SPECIES 17 ENSPEMG00000028754 #9 ENSPEMG00000014359 Ttn (ENSPEMG00000022085) #8 Plekha3 (ENSPEMG00000021541) #11 Fkbp7 (ENSPEMG00000011534) #12 Pjvk (ENSPEMG00000013970) #13 Prkra (ENSPEMG00000011967) #14 Osbpl6 (ENSPEMG00000010580) #15 Rbm45 (ENSPEMG00000002470) #16 Cyct (ENSPEMG00000028091) Pde11a (ENSPEMG00000021597) #18 Ttc30a1 (ENSPEMG00000025624) #19 Ttc30b (ENSPEMG00000001902) #19 ENSPEMG00000023662 Agps (ENSPEMG00000010561) #21 Nfe2l2 (ENSPEMG00000023181) #22 Hnrnpa3 (ENSPEMG00000021885) #23 Mtx2 (ENSPEMG00000022093) #26 Hoxd1 (ENSPEMG00000021389) #27 Hoxd3 (ENSPEMG00000028862) #29 Hoxd4 (ENSPEMG00000024627) #30 ENSPEMG00000029322 ENSPEMG00000028623 #31 Hoxd9 (ENSPEMG00000006162) #32 Hoxd10 (ENSPEMG00000030445) #33 ENSPEMG00000018816 Hoxd12 (ENSPEMG00000019240) #34 Hoxd13 (ENSPEMG00000022412) #35 Evx2 (ENSPEMG00000022145) #36 Lnpk (ENSPEMG00000017827) #37 ENSPEMG00000008662 Murinae ANCESTRAL SPECIES 1 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.a.b #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Mus ANCESTRAL SPECIES 1 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.a.b #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.b #23 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Mus_A ANCESTRAL SPECIES ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.a.b #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.b #23 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Mus_B ANCESTRAL SPECIES 1 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.a.a #19 ENSGT00390000010116.y.a.b #19 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Mouse MODERN SPECIES 11 Sestd1 (ENSMUSG00000042272) Ccdc141 (ENSMUSG00000044033) #7 Ttn (ENSMUSG00000051747) #8 Plekha3 (ENSMUSG00000002733) #11 Fkbp7 (ENSMUSG00000002732) #12 Pjvk (ENSMUSG00000075267) #13 Prkra (ENSMUSG00000002731) #14 Osbpl6 (ENSMUSG00000042359) #15 Rbm45 (ENSMUSG00000042369) #16 Cyct (ENSMUSG00000056436) Pde11a (ENSMUSG00000075270) #18 Ttc30a1 (ENSMUSG00000075271) #19 Ttc30a2 (ENSMUSG00000075272) #19 Ttc30b (ENSMUSG00000075273) #19 Agps (ENSMUSG00000042410) #21 Nfe2l2 (ENSMUSG00000015839) #22 Hnrnpa3 (ENSMUSG00000059005) #23 Mtx2 (ENSMUSG00000027099) #26 Hoxd1 (ENSMUSG00000042448) #27 Hoxd4 (ENSMUSG00000101174) #30 Hoxd3 (ENSMUSG00000079277) #29 Hoxd8 (ENSMUSG00000027102) #31 Hoxd9 (ENSMUSG00000043342) #32 Hoxd10 (ENSMUSG00000050368) #33 Hoxd11 (ENSMUSG00000042499) Hoxd12 (ENSMUSG00000001823) #34 Hoxd13 (ENSMUSG00000001819) #35 Evx2 (ENSMUSG00000001815) #36 Lnpk (ENSMUSG00000009207) #37 Atp5g3 (ENSMUSG00000018770) Atf2 (ENSMUSG00000027104) Mus_C ANCESTRAL SPECIES ENSGT00940000153458.B.f.e ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.y.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.p.a.b #23 ENSGT00940000153147.m.b ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Steppe mouse MODERN SPECIES 3326 Nfe2l2 (ENSMSIG00000005673) #22 ENSMSIG00000005709 #23 ENSMSIG00000005981 ENSMSIG00000006005 Mtx2 (ENSMSIG00000006053) #26 Hoxd1 (ENSMSIG00000006137) #27 Hoxd3 (ENSMSIG00000006158) #29 ENSMSIG00000006186 #30 Hoxd8 (ENSMSIG00000006283) #31 Hoxd9 (ENSMSIG00000006304) #32 Hoxd10 (ENSMSIG00000006313) #33 Hoxd11 (ENSMSIG00000006326) Hoxd12 (ENSMSIG00000006333) #34 Hoxd13 (ENSMSIG00000006348) #35 Evx2 (ENSMSIG00000006361) #36 Lnpk (ENSMSIG00000006386) #37 spretus MODERN SPECIES 11 Ube2e3 (MGP_SPRETEiJ_G0024618) Zfp385b (MGP_SPRETEiJ_G0024616) Sestd1 (MGP_SPRETEiJ_G0024615) Ccdc141 (MGP_SPRETEiJ_G0024614) #7 Ttn (MGP_SPRETEiJ_G0024613) #8 Plekha3 (MGP_SPRETEiJ_G0024612) #11 Fkbp7 (MGP_SPRETEiJ_G0024611) #12 Pjvk (MGP_SPRETEiJ_G0024610) #13 Prkra (MGP_SPRETEiJ_G0024609) #14 Osbpl6 (MGP_SPRETEiJ_G0024608) #15 Rbm45 (MGP_SPRETEiJ_G0024607) #16 Cyct (MGP_SPRETEiJ_G0024606) Pde11a (MGP_SPRETEiJ_G0024605) #18 MGP_SPRETEiJ_G0024604 #19 Agps (MGP_SPRETEiJ_G0024603) #21 Nfe2l2 (MGP_SPRETEiJ_G0024602) #22 MGP_SPRETEiJ_G0024601 ##23 Mtx2 (MGP_SPRETEiJ_G0024600) #26 Hoxd1 (MGP_SPRETEiJ_G0024599) #27 MGP_SPRETEiJ_G0024598 #30 Hoxd4 (MGP_SPRETEiJ_G0024597) #30 Hoxd3 (MGP_SPRETEiJ_G0024596) #29 Hoxd8 (MGP_SPRETEiJ_G0024595) #31 Hoxd9 (MGP_SPRETEiJ_G0024594) #32 Hoxd10 (MGP_SPRETEiJ_G0024593) #33 Hoxd11 (MGP_SPRETEiJ_G0024592) Hoxd12 (MGP_SPRETEiJ_G0024591) #34 Hoxd13 (MGP_SPRETEiJ_G0024590) #35 Evx2 (MGP_SPRETEiJ_G0024589) #36 Lnpk (MGP_SPRETEiJ_G0024588) #37 Atp5g3 (MGP_SPRETEiJ_G0024587) Ryukyu mouse MODERN SPECIES 11 Sestd1 (MGP_CAROLIEiJ_G0023694) Ccdc141 (MGP_CAROLIEiJ_G0023693) #7 Ttn (MGP_CAROLIEiJ_G0023692) #8 Plekha3 (MGP_CAROLIEiJ_G0023691) #11 Fkbp7 (MGP_CAROLIEiJ_G0023690) #12 Pjvk (MGP_CAROLIEiJ_G0023689) #13 Prkra (MGP_CAROLIEiJ_G0023688) #14 Osbpl6 (MGP_CAROLIEiJ_G0023687) #15 Rbm45 (MGP_CAROLIEiJ_G0023686) #16 Cyct (MGP_CAROLIEiJ_G0023685) MGP_CAROLIEiJ_G0023684 Pde11a (MGP_CAROLIEiJ_G0023683) #18 MGP_CAROLIEiJ_G0023682 #19 MGP_CAROLIEiJ_G0023681 #19 Agps (MGP_CAROLIEiJ_G0023680) #21 Nfe2l2 (MGP_CAROLIEiJ_G0023679) #22 MGP_CAROLIEiJ_G0023678 #23 Mtx2 (MGP_CAROLIEiJ_G0023677) #26 Hoxd1 (MGP_CAROLIEiJ_G0023676) #27 MGP_CAROLIEiJ_G0023675 #30 Hoxd4 (MGP_CAROLIEiJ_G0023674) #30 Hoxd3 (MGP_CAROLIEiJ_G0023673) #29 Hoxd8 (MGP_CAROLIEiJ_G0023672) #31 Hoxd9 (MGP_CAROLIEiJ_G0023671) #32 Hoxd10 (MGP_CAROLIEiJ_G0023670) #33 Hoxd11 (MGP_CAROLIEiJ_G0023669) Hoxd12 (MGP_CAROLIEiJ_G0023668) #34 Hoxd13 (MGP_CAROLIEiJ_G0023667) #35 Evx2 (MGP_CAROLIEiJ_G0023666) #36 Lnpk (MGP_CAROLIEiJ_G0023665) #37 Atp5g3 (MGP_CAROLIEiJ_G0023664) Shrew mouse MODERN SPECIES 16 Zfp385b (MGP_PahariEiJ_G0025146) Sestd1 (MGP_PahariEiJ_G0025145) Ccdc141 (MGP_PahariEiJ_G0025144) #7 MGP_PahariEiJ_G0025143 #8 Plekha3 (MGP_PahariEiJ_G0025142) #11 Fkbp7 (MGP_PahariEiJ_G0025141) #12 Pjvk (MGP_PahariEiJ_G0025140) #13 Prkra (MGP_PahariEiJ_G0025139) #14 Osbpl6 (MGP_PahariEiJ_G0025138) #15 Rbm45 (MGP_PahariEiJ_G0025137) #16 Cyct (MGP_PahariEiJ_G0025136) Pde11a (MGP_PahariEiJ_G0025135) #18 MGP_PahariEiJ_G0025134 #19 MGP_PahariEiJ_G0025133 #19 MGP_PahariEiJ_G0025132 #21 Nfe2l2 (MGP_PahariEiJ_G0025131) #22 Hnrnpa3 (MGP_PahariEiJ_G0025130) #23 Mtx2 (MGP_PahariEiJ_G0025129) #26 Hoxd1 (MGP_PahariEiJ_G0025128) #27 MGP_PahariEiJ_G0025127 #30 Hoxd4 (MGP_PahariEiJ_G0025126) #30 Hoxd3 (MGP_PahariEiJ_G0025125) #29 Hoxd8 (MGP_PahariEiJ_G0025124) #31 Hoxd9 (MGP_PahariEiJ_G0025123) #32 Hoxd10 (MGP_PahariEiJ_G0025122) #33 Hoxd11 (MGP_PahariEiJ_G0025121) Hoxd12 (MGP_PahariEiJ_G0025120) #34 Hoxd13 (MGP_PahariEiJ_G0025119) #35 Evx2 (MGP_PahariEiJ_G0025118) #36 Lnpk (MGP_PahariEiJ_G0025117) #37 Atp5g3 (MGP_PahariEiJ_G0025116) Rat MODERN SPECIES 13 Sestd1 (ENSRNOG00000012603) Ccdc141 (ENSRNOG00000012580) #7 Ttn (ENSRNOG00000069271) #8 Plekha3 (ENSRNOG00000011830) #11 Fkbp7 (ENSRNOG00000011758) #12 Pjvk (ENSRNOG00000038165) #13 Prkra (ENSRNOG00000011195) #14 Osbpl6 (ENSRNOG00000010812) #15 Rbm45 (ENSRNOG00000010595) #16 Cyct (ENSRNOG00000024457) #18 Ttc30a (ENSRNOG00000069321) #19 Ttc30a1 (ENSRNOG00000052519) #19 Ttc30b (ENSRNOG00000059460) #19 Agps (ENSRNOG00000001547) #21 ENSRNOG00000066660 Nfe2l2 (ENSRNOG00000001548) #22 Hnrnpa3 (ENSRNOG00000052968) #23 Mtx2 (ENSRNOG00000001559) #26 Hoxd1 (ENSRNOG00000001572) #27 Hoxd3 (ENSRNOG00000001577) #29 AABR07052559.1 (ENSRNOG00000053144) Hoxd4 (ENSRNOG00000001578) #30 Hoxd8 (ENSRNOG00000071108) #31 Hoxd9 (ENSRNOG00000001580) #32 Hoxd10 (ENSRNOG00000001581) #33 Hoxd11 (ENSRNOG00000069591) Hoxd12 (ENSRNOG00000001587) #34 Hoxd13 (ENSRNOG00000001588) #35 Evx2 (ENSRNOG00000001589) #36 Lnpk (ENSRNOG00000001593) #37 Atp5mc3 (ENSRNOG00000001596) Upper Galilee mountains blind mole rat MODERN SPECIES 1735 ENSNGAG00000022834 ENSNGAG00000021249 ENSNGAG00000016600 ##8 ENSNGAG00000021911 #8 Plekha3 (ENSNGAG00000020579) #11 Fkbp7 (ENSNGAG00000022641) #12 Pjvk (ENSNGAG00000022020) #13 Prkra (ENSNGAG00000021816) #14 Osbpl6 (ENSNGAG00000014527) #15 Rbm45 (ENSNGAG00000023886) #16 ENSNGAG00000021016 Cyct (ENSNGAG00000023547) Pde11a (ENSNGAG00000023493) #18 ENSNGAG00000022555 #19 Agps (ENSNGAG00000020263) #21 Nfe2l2 (ENSNGAG00000022809) #22 ENSNGAG00000021745 ##23 Mtx2 (ENSNGAG00000020555) #26 Hoxd1 (ENSNGAG00000021714) #27 Hoxd3 (ENSNGAG00000021055) #29 Hoxd4 (ENSNGAG00000020270) #30 Hoxd8 (ENSNGAG00000011799) #31 Hoxd9 (ENSNGAG00000011105) #32 Hoxd10 (ENSNGAG00000023868) #33 Hoxd11 (ENSNGAG00000023438) Hoxd12 (ENSNGAG00000023455) #34 Hoxd13 (ENSNGAG00000023727) #35 Evx2 (ENSNGAG00000023877) #36 Lnpk (ENSNGAG00000023466) #37 Atp5g3 (ENSNGAG00000004748) Atf2 (ENSNGAG00000003870) Lesser Egyptian jerboa MODERN SPECIES 75 ENSJJAG00000020744 #8 ENSJJAG00000002374 ##8 ENSJJAG00000002097 ENSJJAG00000009117 ENSJJAG00000015136 ##9 Plekha3 (ENSJJAG00000021299) #11 Fkbp7 (ENSJJAG00000012221) #12 Pjvk (ENSJJAG00000012900) #13 Prkra (ENSJJAG00000013031) #14 Osbpl6 (ENSJJAG00000017863) #15 Rbm45 (ENSJJAG00000001312) #16 Pde11a (ENSJJAG00000018583) #18 ENSJJAG00000012087 #19 ENSJJAG00000014867 #19 Agps (ENSJJAG00000016720) #21 Nfe2l2 (ENSJJAG00000019899) #22 ENSJJAG00000000149 #23 ENSJJAG00000013228 #26 ENSJJAG00000019952 Hoxd1 (ENSJJAG00000019059) #27 Hoxd10 (ENSJJAG00000011932) #33 Hoxd11 (ENSJJAG00000012344) Hoxd12 (ENSJJAG00000016261) #34 Hoxd13 (ENSJJAG00000016388) #35 Evx2 (ENSJJAG00000017484) #36 Lnpk (ENSJJAG00000011710) #37 ENSJJAG00000013766 Atp5g3 (ENSJJAG00000022403) Atf2 (ENSJJAG00000015836) Chn1 (ENSJJAG00000015001) ENSJJAG00000014124 Kangaroo rat MODERN SPECIES 324 Sestd1 (ENSDORG00000012622) ENSDORG00000027337 #7 ENSDORG00000029701 #8 ENSDORG00000029166 ##9 Plekha3 (ENSDORG00000015344) #11 Fkbp7 (ENSDORG00000013340) #12 Pjvk (ENSDORG00000013339) #13 Prkra (ENSDORG00000013338) #14 Osbpl6 (ENSDORG00000001912) #15 Rbm45 (ENSDORG00000015831) #16 Cyct (ENSDORG00000004101) ENSDORG00000023150 #19 ENSDORG00000028697 #19 ENSDORG00000028567 #19 Agps (ENSDORG00000006480) #21 Nfe2l2 (ENSDORG00000030173) #22 Hnrnpa3 (ENSDORG00000011155) #23 Mtx2 (ENSDORG00000003848) #26 Hoxd1 (ENSDORG00000009445) #27 Hoxd3 (ENSDORG00000029389) #29 Hoxd4 (ENSDORG00000028681) #30 ENSDORG00000027655 #31 Hoxd10 (ENSDORG00000009436) #33 ENSDORG00000029219 Hoxd12 (ENSDORG00000009434) #34 Evx2 (ENSDORG00000009432) #36 Lnpk (ENSDORG00000015736) #37 Atp5g3 (ENSDORG00000012973) Atf2 (ENSDORG00000024409) Chn1 (ENSDORG00000002182) Chrna1 (ENSDORG00000001136) Rodentia_A ANCESTRAL SPECIES 13 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000154808.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000154808.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Hystricomorpha_b ANCESTRAL SPECIES 24 ENSGT01100000263523.A #8 ENSGT01100000263523.B ##8 ENSGT00900000143159 ENSGT00900000143154 ENSGT00920000150542 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000154808.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Long-tailed chinchilla MODERN SPECIES 110 ENSCLAG00000014023 ENSCLAG00000015797 ENSCLAG00000015650 ENSCLAG00000016023 ##9 PLEKHA3 (ENSCLAG00000014135) #11 PRKRA (ENSCLAG00000010338) #14 PJVK (ENSCLAG00000010713) #13 OSBPL6 (ENSCLAG00000011433) #15 RBM45 (ENSCLAG00000015215) #16 PDE11A (ENSCLAG00000013013) #18 ENSCLAG00000013714 #19 ENSCLAG00000017938 #19 AGPS (ENSCLAG00000013279) #21 ENSCLAG00000013627 ENSCLAG00000012626 NFE2L2 (ENSCLAG00000013122) #22 HNRNPA3 (ENSCLAG00000012855) #23 ENSCLAG00000011088 MTX2 (ENSCLAG00000011598) #26 HOXD1 (ENSCLAG00000012505) #27 ENSCLAG00000013605 #29 HOXD4 (ENSCLAG00000014461) #30 ENSCLAG00000011108 #31 HOXD9 (ENSCLAG00000012447) #32 HOXD10 (ENSCLAG00000012482) #33 ENSCLAG00000012563 HOXD12 (ENSCLAG00000013058) #34 HOXD13 (ENSCLAG00000013095) #35 EVX2 (ENSCLAG00000014389) #36 LNPK (ENSCLAG00000015033) #37 TRIML1 (ENSCLAG00000014494) Degu MODERN SPECIES 106 ENSODEG00000007812 ENSODEG00000008370 ENSODEG00000008948 ##9 PLEKHA3 (ENSODEG00000007880) #11 ENSODEG00000008149 #12 PJVK (ENSODEG00000008177) #13 ENSODEG00000008743 #14 OSBPL6 (ENSODEG00000009667) #15 ENSODEG00000019659 RBM45 (ENSODEG00000007959) #16 ENSODEG00000019574 PDE11A (ENSODEG00000010682) #18 ENSODEG00000019592 #19 ENSODEG00000020058 #19 AGPS (ENSODEG00000008272) #21 NFE2L2 (ENSODEG00000010043) #22 ENSODEG00000009265 ENSODEG00000009697 MTX2 (ENSODEG00000008062) #26 ENSODEG00000008879 HOXD1 (ENSODEG00000008961) #27 HOXD3 (ENSODEG00000009722) #29 HOXD4 (ENSODEG00000010297) #30 ENSODEG00000010496 #31 HOXD9 (ENSODEG00000008626) #32 HOXD10 (ENSODEG00000010382) #33 ENSODEG00000010934 HOXD12 (ENSODEG00000008376) #34 HOXD13 (ENSODEG00000008793) #35 EVX2 (ENSODEG00000010771) #36 ENSODEG00000008992 Guinea pig MODERN SPECIES 3 CCDC141 (ENSCPOG00000003955) #7 ENSCPOG00000032370 #8 ENSCPOG00000030784 ##8 ENSCPOG00000038729 ENSCPOG00000034673 ENSCPOG00000036479 ##9 PLEKHA3 (ENSCPOG00000003906) #11 FKBP7 (ENSCPOG00000037159) #12 PJVK (ENSCPOG00000037882) #13 ENSCPOG00000003900 #14 OSBPL6 (ENSCPOG00000002816) #15 RBM45 (ENSCPOG00000000684) #16 PDE11A (ENSCPOG00000000682) #18 ENSCPOG00000000681 #19 AGPS (ENSCPOG00000000679) #21 NFE2L2 (ENSCPOG00000031261) #22 ENSCPOG00000004251 #23 ENSCPOG00000027250 MTX2 (ENSCPOG00000011099) #26 HOXD1 (ENSCPOG00000005509) #27 HOXD3 (ENSCPOG00000034932) #29 HOXD4 (ENSCPOG00000036552) #30 HOXD8 (ENSCPOG00000015005) #31 HOXD9 (ENSCPOG00000015006) #32 HOXD10 (ENSCPOG00000011368) #33 ENSCPOG00000019766 HOXD12 (ENSCPOG00000005496) #34 HOXD13 (ENSCPOG00000006722) #35 EVX2 (ENSCPOG00000006711) #36 LNPK (ENSCPOG00000010971) #37 ATP5MC3 (ENSCPOG00000040161) Naked mole-rat female MODERN SPECIES 22 CCDC141 (ENSHGLG00000002888) #7 TTN (ENSHGLG00000036835) #8 ENSHGLG00000018641 #11 FKBP7 (ENSHGLG00000019268) #12 PJVK (ENSHGLG00000011003) #13 ENSHGLG00000010663 #14 ENSHGLG00000003065 #15 ENSHGLG00000040220 ENSHGLG00000045276 ENSHGLG00000007342 #16 ENSHGLG00000006609 ENSHGLG00000005226 #18 TTC30B (ENSHGLG00000042840) #19 ENSHGLG00000036841 #19 AGPS (ENSHGLG00000007541) #21 NFE2L2 (ENSHGLG00000006475) #22 HNRNPA3 (ENSHGLG00000005451) #23 ENSHGLG00000036655 ENSHGLG00000046644 ENSHGLG00000012734 MTX2 (ENSHGLG00000004177) #26 HOXD1 (ENSHGLG00000004072) #27 HOXD3 (ENSHGLG00000003761) #29 HOXD4 (ENSHGLG00000037842) #30 ENSHGLG00000003577 #31 HOXD10 (ENSHGLG00000033462) #33 HOXD9 (ENSHGLG00000007185) #32 HOXD11 (ENSHGLG00000034527) HOXD12 (ENSHGLG00000005403) #34 HOXD13 (ENSHGLG00000050884) #35 EVX2 (ENSHGLG00000004218) #36 Sciuridae ANCESTRAL SPECIES 10 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.xb ENSGT00940000156582 Marmotini ANCESTRAL SPECIES 2 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.gb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.xb.a ENSGT00940000156582 Alpin marmot MODERN SPECIES 5 AGPS (ENSMMMG00000023778) #21 NFE2L2 (ENSMMMG00000023776) #22 MTX2 (ENSMMMG00000023772) #26 HOXD3 (ENSMMMG00000023768) #29 HOXD4 (ENSMMMG00000023767) #30 ENSMMMG00000023765 #31 HOXD9 (ENSMMMG00000023764) #32 HOXD10 (ENSMMMG00000023763) #33 ENSMMMG00000023762 HOXD12 (ENSMMMG00000023760) #34 HOXD13 (ENSMMMG00000023759) #35 LNPK (ENSMMMG00000023755) #37 ENSMMMG00000023748 ATF2 (ENSMMMG00000023733) ENSMMMG00000023730 CHN1 (ENSMMMG00000023718) CHRNA1 (ENSMMMG00000023717) Marmotini_b ANCESTRAL SPECIES 10 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.B ##8 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.gb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.xb.a ENSGT00940000156582 Arctic ground squirrel MODERN SPECIES 96 ENSUPAG00010005828 ##9 ENSUPAG00010005845 ##9 ENSUPAG00010005849 #9 ENSUPAG00010005854 ENSUPAG00010005857 ##9 PLEKHA3 (ENSUPAG00010005864) #11 FKBP7 (ENSUPAG00010005868) #12 PJVK (ENSUPAG00010005878) #13 PRKRA (ENSUPAG00010005881) #14 OSBPL6 (ENSUPAG00010005891) #15 RBM45 (ENSUPAG00010006036) #16 ENSUPAG00010006054 PDE11A (ENSUPAG00010006062) #18 ENSUPAG00010006082 #19 AGPS (ENSUPAG00010006084) #21 NFE2L2 (ENSUPAG00010006108) #22 HNRNPA3 (ENSUPAG00010006133) #23 Squirrel MODERN SPECIES 109 ENSSTOG00000034976 #9 ENSSTOG00000033165 ENSSTOG00000032305 ENSSTOG00000032899 ##8 ENSSTOG00000006208 ##9 PLEKHA3 (ENSSTOG00000006191) #11 FKBP7 (ENSSTOG00000006176) #12 PJVK (ENSSTOG00000028411) #13 PRKRA (ENSSTOG00000006156) #14 OSBPL6 (ENSSTOG00000006092) #15 RBM45 (ENSSTOG00000002708) #16 ENSSTOG00000008853 PDE11A (ENSSTOG00000012639) #18 ENSSTOG00000003267 #19 AGPS (ENSSTOG00000012623) #21 NFE2L2 (ENSSTOG00000000313) #22 HNRNPA3 (ENSSTOG00000025125) #23 ENSSTOG00000030884 MTX2 (ENSSTOG00000014688) #26 HOXD1 (ENSSTOG00000012230) #27 HOXD3 (ENSSTOG00000014680) #29 HOXD4 (ENSSTOG00000029055) #30 ENSSTOG00000023453 #31 HOXD9 (ENSSTOG00000026761) #32 HOXD10 (ENSSTOG00000003935) #33 HOXD12 (ENSSTOG00000004918) #34 HOXD13 (ENSSTOG00000004117) #35 EVX2 (ENSSTOG00000014512) #36 LNPK (ENSSTOG00000014498) #37 ENSSTOG00000013572 ATF2 (ENSSTOG00000014079) Eurasian red squirrel MODERN SPECIES 12 CCDC141 (ENSSVLG00005020180) #7 ENSSVLG00005008368 ##9 PLEKHA3 (ENSSVLG00005005206) #11 FKBP7 (ENSSVLG00005005181) #12 ENSSVLG00005005163 PJVK (ENSSVLG00005005095) #13 PRKRA (ENSSVLG00005005027) #14 OSBPL6 (ENSSVLG00005004465) #15 RBM45 (ENSSVLG00005004137) #16 ENSSVLG00005004113 PDE11A (ENSSVLG00005004050) #18 ENSSVLG00005004018 #19 ENSSVLG00005004006 #19 ENSSVLG00005003996 #19 AGPS (ENSSVLG00005003959) #21 ENSSVLG00005003903 #22 ENSSVLG00005003881 #23 MTX2 (ENSSVLG00005003812) #26 HOXD1 (ENSSVLG00005003762) #27 HOXD4 (ENSSVLG00005003676) #30 HOXD8 (ENSSVLG00005003645) #31 HOXD9 (ENSSVLG00005003618) #32 HOXD10 (ENSSVLG00005003599) #33 HOXD11 (ENSSVLG00005003581) HOXD12 (ENSSVLG00005003565) #34 HOXD13 (ENSSVLG00005003554) #35 EVX2 (ENSSVLG00005003539) #36 LNPK (ENSSVLG00005003500) #37 ENSSVLG00005003466 ENSSVLG00005003430 ENSSVLG00005003279 Laurasiatheria ANCESTRAL SPECIES 12 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000182892.a.a.b #22 Hedgehog MODERN SPECIES 11801 NFE2L2 (ENSEEUG00000011243) #22 Common shrew MODERN SPECIES 12665 NFE2L2 (ENSSARG00000010915) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Artiodactyla ANCESTRAL SPECIES 13 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Cetacea ANCESTRAL SPECIES 14 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a.hb.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Odontoceti ANCESTRAL SPECIES 13 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a.hb.b ##23 ENSGT00940000153147.m.a.a.a.b.a.a.hb.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Odontoceti_a ANCESTRAL SPECIES 10 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263523.L ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a.hb.b ##23 ENSGT00940000153147.m.a.a.a.b.a.a.hb.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Odontoceti_b ANCESTRAL SPECIES 12 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263523.L ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a.hb.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00390000008142.t ENSGT00940000154298.a.a Monodontidae ANCESTRAL SPECIES 10 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a.hb.b ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00950000182834.A.a.a.t ENSGT00390000008142.t Narwhal MODERN SPECIES 302 ENSMMNG00015008454 TTN (ENSMMNG00015009913) #8 PLEKHA3 (ENSMMNG00015013955) #11 ENSMMNG00015013983 FKBP7 (ENSMMNG00015013990) #12 PJVK (ENSMMNG00015014003) #13 PRKRA (ENSMMNG00015014019) #14 OSBPL6 (ENSMMNG00015014111) #15 RBM45 (ENSMMNG00015014220) #16 ENSMMNG00015014238 PDE11A (ENSMMNG00015014260) #18 ENSMMNG00015014296 ENSMMNG00015007201 #19 ENSMMNG00015007232 #19 AGPS (ENSMMNG00015007255) #21 NFE2L2 (ENSMMNG00015007306) #22 ENSMMNG00015007339 ##23 MTX2 (ENSMMNG00015007394) #26 HOXD1 (ENSMMNG00015007440) #27 HOXD3 (ENSMMNG00015007460) #29 HOXD4 (ENSMMNG00015007477) #30 HOXD8 (ENSMMNG00015007526) #31 HOXD9 (ENSMMNG00015007556) #32 HOXD10 (ENSMMNG00015007571) #33 ENSMMNG00015007589 HOXD12 (ENSMMNG00015007598) #34 HOXD13 (ENSMMNG00015007609) #35 EVX2 (ENSMMNG00015007622) #36 LNPK (ENSMMNG00015007647) #37 ENSMMNG00015007684 ENSMMNG00015007699 Beluga whale MODERN SPECIES 84 ENSDLEG00000009909 #9 ENSDLEG00000009890 ENSDLEG00000009862 #8 ENSDLEG00000009851 PLEKHA3 (ENSDLEG00000009842) #11 FKBP7 (ENSDLEG00000009831) #12 PJVK (ENSDLEG00000009801) #13 PRKRA (ENSDLEG00000009768) #14 OSBPL6 (ENSDLEG00000009570) #15 RBM45 (ENSDLEG00000009507) #16 ENSDLEG00000009493 ENSDLEG00000009481 #18 ENSDLEG00000009469 #19 ENSDLEG00000009463 #19 AGPS (ENSDLEG00000009335) #21 NFE2L2 (ENSDLEG00000009266) #22 ENSDLEG00000009227 ##23 MTX2 (ENSDLEG00000009199) #26 HOXD1 (ENSDLEG00000009181) #27 HOXD3 (ENSDLEG00000009171) #29 HOXD4 (ENSDLEG00000009166) #30 HOXD8 (ENSDLEG00000009104) #31 HOXD9 (ENSDLEG00000009091) #32 HOXD10 (ENSDLEG00000009076) #33 ENSDLEG00000009052 HOXD12 (ENSDLEG00000009038) #34 HOXD13 (ENSDLEG00000009014) #35 EVX2 (ENSDLEG00000008943) #36 LNPK (ENSDLEG00000008885) #37 ENSDLEG00000008854 ENSDLEG00000008837 Vaquita MODERN SPECIES 18 ENSPSNG00000006659 ##9 ENSPSNG00000006702 ##9 ENSPSNG00000006762 ##8 PLEKHA3 (ENSPSNG00000006784) #11 ENSPSNG00000006805 FKBP7 (ENSPSNG00000006918) #12 PJVK (ENSPSNG00000006966) #13 PRKRA (ENSPSNG00000007030) #14 OSBPL6 (ENSPSNG00000007225) #15 RBM45 (ENSPSNG00000007527) #16 ENSPSNG00000007564 PDE11A (ENSPSNG00000007618) #18 ENSPSNG00000007902 #19 ENSPSNG00000005284 #19 AGPS (ENSPSNG00000005315) #21 NFE2L2 (ENSPSNG00000005384) #22 ENSPSNG00000005439 ##23 MTX2 (ENSPSNG00000005488) #26 HOXD1 (ENSPSNG00000005524) #27 HOXD3 (ENSPSNG00000005539) #29 HOXD4 (ENSPSNG00000005556) #30 HOXD8 (ENSPSNG00000005602) #31 HOXD9 (ENSPSNG00000005639) #32 HOXD10 (ENSPSNG00000005654) #33 HOXD11 (ENSPSNG00000005666) HOXD12 (ENSPSNG00000005695) #34 HOXD13 (ENSPSNG00000005715) #35 EVX2 (ENSPSNG00000005734) #36 LNPK (ENSPSNG00000005786) #37 ENSPSNG00000005846 ENSPSNG00000005869 Dolphin MODERN SPECIES 4341 NFE2L2 (ENSTTRG00000014247) #22 ENSTTRG00000014225 ##23 Sperm whale MODERN SPECIES 11 ENSPCTG00005009719 ##9 ENSPCTG00005009648 ##9 ENSPCTG00005009577 #9 TTN (ENSPCTG00005004468) #8 PLEKHA3 (ENSPCTG00005003988) #11 FKBP7 (ENSPCTG00005003977) #12 PRKRA (ENSPCTG00005003951) #14 PJVK (ENSPCTG00005003934) #13 OSBPL6 (ENSPCTG00005003757) #15 RBM45 (ENSPCTG00005003694) #16 ENSPCTG00005003686 PDE11A (ENSPCTG00005003616) #18 ENSPCTG00005003599 #19 ENSPCTG00005003590 #19 AGPS (ENSPCTG00005003530) #21 NFE2L2 (ENSPCTG00005003486) #22 ENSPCTG00005003466 ##23 MTX2 (ENSPCTG00005007528) #26 HOXD1 (ENSPCTG00005007516) #27 HOXD3 (ENSPCTG00005007508) #29 HOXD4 (ENSPCTG00005007493) #30 HOXD8 (ENSPCTG00005007418) #31 HOXD9 (ENSPCTG00005007399) #32 HOXD10 (ENSPCTG00005007393) #33 ENSPCTG00005007381 HOXD12 (ENSPCTG00005007367) #34 HOXD13 (ENSPCTG00005007354) #35 EVX2 (ENSPCTG00005007330) #36 LNPK (ENSPCTG00005007293) #37 ATP5MC3 (ENSPCTG00005007202) ATF2 (ENSPCTG00005007004) Blue whale MODERN SPECIES 18 ENSBMSG00010006553 #9 ENSBMSG00010006534 ##8 ENSBMSG00010006522 ENSBMSG00010006506 #11 FKBP7 (ENSBMSG00010006490) #12 PJVK (ENSBMSG00010006471) #13 PRKRA (ENSBMSG00010006442) #14 OSBPL6 (ENSBMSG00010006347) #15 RBM45 (ENSBMSG00010006279) #16 ENSBMSG00010006266 ENSBMSG00010006255 PDE11A (ENSBMSG00010006216) #18 ENSBMSG00010006199 #19 ENSBMSG00010006193 #19 AGPS (ENSBMSG00010006175) #21 NFE2L2 (ENSBMSG00010006157) #22 ENSBMSG00010006149 ##23 MTX2 (ENSBMSG00010006100) #26 HOXD1 (ENSBMSG00010006055) #27 HOXD3 (ENSBMSG00010006046) #29 HOXD4 (ENSBMSG00010006036) #30 HOXD8 (ENSBMSG00010006022) #31 HOXD9 (ENSBMSG00010006014) #32 HOXD10 (ENSBMSG00010006002) #33 HOXD11 (ENSBMSG00010005993) HOXD12 (ENSBMSG00010005987) #34 HOXD13 (ENSBMSG00010005980) #35 EVX2 (ENSBMSG00010005974) #36 LNPK (ENSBMSG00010005955) #37 ATP5MC3 (ENSBMSG00010005937) ATF2 (ENSBMSG00010005883) Pecora ANCESTRAL SPECIES 24 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Percora_a ANCESTRAL SPECIES 5 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Bovidae ANCESTRAL SPECIES 8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Bovinae ANCESTRAL SPECIES 5 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT01100000263474.a.b.b.f.g.a.b ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.tb.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000153299.c.a.b.u.a ENSGT00940000154298.a.a Bos ANCESTRAL SPECIES 6 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT01100000263474.a.b.b.f.g.a.b ENSGT00390000010116.fc.b #19 ENSGT01100000263480.a.a.a.b.a.a.a.a.b.a ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.tb.b #23 ENSGT00940000153147.m.a.a.a.b.a.b.tb.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000153299.c.a.b.u.a Bos_a ANCESTRAL SPECIES 4 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT01100000263480.a.a.a.b.a.a.a.a.b.a ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.tb.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000153299.c.a.b.u.a ENSGT00940000154298.a.a Wild yak MODERN SPECIES 1208 OSBPL6 (ENSBMUG00000024336) #15 ENSBMUG00000024374 RBM45 (ENSBMUG00000024394) #16 PDE11A (ENSBMUG00000024453) #18 ENSBMUG00000024477 ENSBMUG00000024480 #19 ENSBMUG00000024488 #19 AGPS (ENSBMUG00000024509) #21 NFE2L2 (ENSBMUG00000024519) #22 ENSBMUG00000024527 ##23 Domestic yak MODERN SPECIES 11 PLEKHA3 (ENSBGRG00000000848) #11 FKBP7 (ENSBGRG00000000806) #12 PJVK (ENSBGRG00000000796) #13 PRKRA (ENSBGRG00000000775) #14 OSBPL6 (ENSBGRG00000000437) #15 ENSBGRG00000000374 RBM45 (ENSBGRG00000000341) #16 ENSBGRG00000000328 ENSBGRG00000000319 ENSBGRG00000000317 PDE11A (ENSBGRG00000000288) #18 ENSBGRG00000000270 #19 ENSBGRG00000000264 ENSBGRG00000000256 #19 AGPS (ENSBGRG00000000237) #21 NFE2L2 (ENSBGRG00000000213) #22 ENSBGRG00000000202 #23 MTX2 (ENSBGRG00000017363) #26 HOXD1 (ENSBGRG00000017303) #27 HOXD3 (ENSBGRG00000017255) #29 ENSBGRG00000017167 #30 HOXD8 (ENSBGRG00000017045) #31 HOXD9 (ENSBGRG00000017014) #32 HOXD10 (ENSBGRG00000016979) #33 HOXD11 (ENSBGRG00000016923) HOXD12 (ENSBGRG00000016890) #34 HOXD13 (ENSBGRG00000016836) #35 EVX2 (ENSBGRG00000016780) #36 LNPK (ENSBGRG00000016182) #37 ENSBGRG00000016132 ATP5MC3 (ENSBGRG00000016024) Bos_b ANCESTRAL SPECIES 3 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT01100000263474.a.b.b.f.g.a.b ENSGT00390000010116.fc.b #19 ENSGT01100000263480.a.a.a.b.a.a.a.a.b.a ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b.tb.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT01030000234916.g.b ENSGT00390000001859 #37 ENSGT00940000154298.a.a Cow MODERN SPECIES 11 ENSBTAG00000053974 #9 ENSBTAG00000052348 ENSBTAG00000052709 ##9 PLEKHA3 (ENSBTAG00000001098) #11 FKBP7 (ENSBTAG00000001097) #12 PJVK (ENSBTAG00000033254) #13 PRKRA (ENSBTAG00000001096) #14 OSBPL6 (ENSBTAG00000014405) #15 RBM45 (ENSBTAG00000006168) #16 CYCT (ENSBTAG00000039522) PDE11A (ENSBTAG00000016396) #18 ENSBTAG00000049860 TTC30A (ENSBTAG00000027694) #19 TTC30B (ENSBTAG00000027696) #19 AGPS (ENSBTAG00000009897) #21 NFE2L2 (ENSBTAG00000019255) #22 HNRNPA3 (ENSBTAG00000021580) #23 MTX2 (ENSBTAG00000006693) #26 HOXD1 (ENSBTAG00000015840) #27 HOXD3 (ENSBTAG00000004835) #29 HOXD4 (ENSBTAG00000039581) #30 HOXD8 (ENSBTAG00000049845) #31 HOXD9 (ENSBTAG00000016033) #32 HOXD10 (ENSBTAG00000016030) #33 HOXD11 (ENSBTAG00000033330) HOXD12 (ENSBTAG00000004314) #34 HOXD13 (ENSBTAG00000004313) #35 EVX2 (ENSBTAG00000049537) #36 ENSBTAG00000002009 ENSBTAG00000050237 LNPK (ENSBTAG00000018061) #37 Hybrid Bos Indicus MODERN SPECIES 11 ENSBIXG00005029567 #9 ENSBIXG00005029587 ENSBIXG00005029747 ##9 PLEKHA3 (ENSBIXG00005029758) #11 FKBP7 (ENSBIXG00005029776) #12 PJVK (ENSBIXG00005029785) #13 PRKRA (ENSBIXG00005029821) #14 OSBPL6 (ENSBIXG00005029906) #15 RBM45 (ENSBIXG00005030103) #16 ENSBIXG00005030117 PDE11A (ENSBIXG00005030175) #18 ENSBIXG00005030242 #19 ENSBIXG00005030245 ENSBIXG00005030257 #19 AGPS (ENSBIXG00005030278) #21 NFE2L2 (ENSBIXG00005030317) #22 HNRNPA3 (ENSBIXG00005030333) #23 ENSBIXG00005030352 ENSBIXG00005030356 MTX2 (ENSBIXG00005030400) #26 HOXD1 (ENSBIXG00005030413) #27 HOXD3 (ENSBIXG00005030419) #29 HOXD8 (ENSBIXG00005030431) #31 HOXD9 (ENSBIXG00005030437) #32 HOXD10 (ENSBIXG00005005289) #33 HOXD11 (ENSBIXG00005001515) HOXD12 (ENSBIXG00005001517) #34 HOXD13 (ENSBIXG00005001519) #35 EVX2 (ENSBIXG00005005288) #36 ENSBIXG00005029246 ENSBIXG00005029245 American bison MODERN SPECIES 3320 ENSBBBG00000018488 #9 ENSBBBG00000018480 ENSBBBG00000018475 ##9 PLEKHA3 (ENSBBBG00000004536) #11 FKBP7 (ENSBBBG00000018464) #12 PJVK (ENSBBBG00000004525) #13 PRKRA (ENSBBBG00000018426) #14 OSBPL6 (ENSBBBG00000018398) #15 RBM45 (ENSBBBG00000004406) #16 ENSBBBG00000017912 PDE11A (ENSBBBG00000017894) #18 ENSBBBG00000017839 ENSBBBG00000017832 #19 ENSBBBG00000007701 #19 AGPS (ENSBBBG00000017817) #21 NFE2L2 (ENSBBBG00000017780) #22 ENSBBBG00000007269 #23 MTX2 (ENSBBBG00000017733) #26 ENSBBBG00000017700 ENSBBBG00000004376 HOXD1 (ENSBBBG00000017690) #27 HOXD3 (ENSBBBG00000017682) #29 HOXD4 (ENSBBBG00000017669) #30 HOXD8 (ENSBBBG00000017657) #31 HOXD9 (ENSBBBG00000017650) #32 HOXD10 (ENSBBBG00000006962) #33 HOXD12 (ENSBBBG00000017645) #34 HOXD13 (ENSBBBG00000017641) #35 ENSBBBG00000017638 ENSBBBG00000017634 LNPK (ENSBBBG00000017627) #37 Caprinae ANCESTRAL SPECIES 5 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00390000010116.fc.a #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Rambouillet Sheep MODERN SPECIES 11 ENSOARG00020020356 #8 ENSOARG00020020425 ##9 ENSOARG00020020485 #9 ENSOARG00020020514 ##9 PLEKHA3 (ENSOARG00020020544) #11 FKBP7 (ENSOARG00020020704) #12 PJVK (ENSOARG00020020753) #13 PRKRA (ENSOARG00020020855) #14 OSBPL6 (ENSOARG00020020986) #15 RBM45 (ENSOARG00020022028) #16 ENSOARG00020022078 PDE11A (ENSOARG00020022115) #18 ENSOARG00020022364 #19 ENSOARG00020022373 #19 AGPS (ENSOARG00020022410) #21 NFE2L2 (ENSOARG00020022726) #22 HNRNPA3 (ENSOARG00020000123) #23 MTX2 (ENSOARG00020000188) #26 HOXD1 (ENSOARG00020000237) #27 HOXD3 (ENSOARG00020000257) #29 HOXD4 (ENSOARG00020000275) #30 HOXD8 (ENSOARG00020000297) #31 HOXD9 (ENSOARG00020000321) #32 HOXD10 (ENSOARG00020000330) #33 hoxd11 (ENSOARG00020000346) HOXD12 (ENSOARG00020000357) #34 HOXD13 (ENSOARG00020000373) #35 EVX2 (ENSOARG00020000381) #36 ENSOARG00020000394 LNPK (ENSOARG00020000416) #37 ATP5MC3 (ENSOARG00020000538) Goat MODERN SPECIES 11 ENSCHIG00000016308 ##9 ENSCHIG00000027063 #9 ENSCHIG00000018472 ##9 PLEKHA3 (ENSCHIG00000019515) #11 FKBP7 (ENSCHIG00000017480) #12 PJVK (ENSCHIG00000013011) #13 PRKRA (ENSCHIG00000015333) #14 OSBPL6 (ENSCHIG00000008898) #15 ENSCHIG00000017164 RBM45 (ENSCHIG00000010687) #16 ENSCHIG00000026156 PDE11A (ENSCHIG00000016852) #18 ENSCHIG00000011716 #19 ENSCHIG00000011750 #19 AGPS (ENSCHIG00000015256) #21 NFE2L2 (ENSCHIG00000026055) #22 ENSCHIG00000015430 #23 MTX2 (ENSCHIG00000008892) #26 HOXD1 (ENSCHIG00000017515) #27 HOXD3 (ENSCHIG00000011624) #29 HOXD4 (ENSCHIG00000019702) #30 HOXD8 (ENSCHIG00000013371) #31 HOXD9 (ENSCHIG00000023245) #32 HOXD10 (ENSCHIG00000011771) #33 HOXD11 (ENSCHIG00000026087) HOXD12 (ENSCHIG00000014734) #34 HOXD13 (ENSCHIG00000009994) #35 EVX2 (ENSCHIG00000026644) #36 ENSCHIG00000004992 ENSCHIG00000025787 LNPK (ENSCHIG00000012313) #37 Siberian musk deer MODERN SPECIES 342 OSBPL6 (ENSMMSG00000006219) #15 RBM45 (ENSMMSG00000006596) #16 ENSMMSG00000006624 PDE11A (ENSMMSG00000006654) #18 ENSMMSG00000006819 #19 ENSMMSG00000006854 #19 AGPS (ENSMMSG00000006894) #21 ENSMMSG00000006963 NFE2L2 (ENSMMSG00000006992) #22 ENSMMSG00000007068 ##23 MTX2 (ENSMMSG00000007226) #26 HOXD1 (ENSMMSG00000007322) #27 HOXD3 (ENSMMSG00000007343) #29 HOXD4 (ENSMMSG00000007365) #30 HOXD8 (ENSMMSG00000007407) #31 HOXD9 (ENSMMSG00000007480) #32 HOXD10 (ENSMMSG00000007495) #33 HOXD11 (ENSMMSG00000007513) HOXD12 (ENSMMSG00000007530) #34 HOXD13 (ENSMMSG00000007541) #35 EVX2 (ENSMMSG00000007555) #36 LNPK (ENSMMSG00000007582) #37 ENSMMSG00000007642 ATF2 (ENSMMSG00000007713) Yarkand deer MODERN SPECIES 26 ENSCHYG00000023401 ##9 ENSCHYG00000023464 #9 ENSCHYG00000023539 PLEKHA3 (ENSCHYG00000023579) #11 FKBP7 (ENSCHYG00000023614) #12 PJVK (ENSCHYG00000023643) #13 PRKRA (ENSCHYG00000023726) #14 OSBPL6 (ENSCHYG00000023926) #15 RBM45 (ENSCHYG00000024364) #16 ENSCHYG00000024431 ENSCHYG00000024445 PDE11A (ENSCHYG00000024466) #18 ENSCHYG00000024550 #19 ENSCHYG00000024559 #19 AGPS (ENSCHYG00000024578) #21 NFE2L2 (ENSCHYG00000024719) #22 ENSCHYG00000015038 #23 ENSCHYG00000015305 MTX2 (ENSCHYG00000015392) #26 HOXD1 (ENSCHYG00000015562) #27 HOXD3 (ENSCHYG00000015650) #29 HOXD4 (ENSCHYG00000015683) #30 HOXD8 (ENSCHYG00000015741) #31 HOXD9 (ENSCHYG00000015808) #32 HOXD10 (ENSCHYG00000015831) #33 ENSCHYG00000015846 HOXD12 (ENSCHYG00000015954) #34 HOXD13 (ENSCHYG00000015985) #35 LNPK (ENSCHYG00000016125) #37 ENSCHYG00000016391 ENSCHYG00000016417 Camelidae ANCESTRAL SPECIES 16 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000162151 #18 ENSGT00390000010116.fc.b #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 ENSGT01030000234635.a.b.a.b.b.a.a Alpaca MODERN SPECIES 3699 PDE11A (ENSVPAG00000005129) #18 ENSVPAG00000005128 #19 ENSVPAG00000005127 #19 AGPS (ENSVPAG00000005122) #21 NFE2L2 (ENSVPAG00000005117) #22 Arabian camel MODERN SPECIES 31 ENSCDRG00005005297 ##9 ENSCDRG00005005276 ##9 ENSCDRG00005005255 #9 TTN (ENSCDRG00005003286) #8 PLEKHA3 (ENSCDRG00005003046) #11 FKBP7 (ENSCDRG00005003026) #12 PJVK (ENSCDRG00005003020) #13 PRKRA (ENSCDRG00005002991) #14 ENSCDRG00005002982 OSBPL6 (ENSCDRG00005002764) #15 RBM45 (ENSCDRG00005002693) #16 PDE11A (ENSCDRG00005002676) #18 ENSCDRG00005002663 #19 ENSCDRG00005002654 #19 AGPS (ENSCDRG00005002612) #21 NFE2L2 (ENSCDRG00005002588) #22 HNRNPA3 (ENSCDRG00005002567) #23 MTX2 (ENSCDRG00005002532) #26 HOXD3 (ENSCDRG00005002512) #29 HOXD4 (ENSCDRG00005002497) #30 HOXD8 (ENSCDRG00005002477) #31 HOXD9 (ENSCDRG00005002467) #32 HOXD10 (ENSCDRG00005002456) #33 HOXD11 (ENSCDRG00005002440) HOXD12 (ENSCDRG00005002432) #34 HOXD13 (ENSCDRG00005002411) #35 EVX2 (ENSCDRG00005002358) #36 LNPK (ENSCDRG00005002325) #37 ATP5MC3 (ENSCDRG00005002307) ATF2 (ENSCDRG00005002159) CHN1 (ENSCDRG00005002091) Suina ANCESTRAL SPECIES 3 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000010491.kb.a ENSGT00390000001859 #37 ENSGT00940000154298.a.a Chacoan peccary MODERN SPECIES 88 SESTD1 (ENSCWAG00000004249) ENSCWAG00000004196 #7 ENSCWAG00000004147 ##9 ENSCWAG00000004104 ##9 ENSCWAG00000004059 #9 TTN (ENSCWAG00000002022) #8 PLEKHA3 (ENSCWAG00000001517) #11 FKBP7 (ENSCWAG00000001502) #12 PJVK (ENSCWAG00000001480) #13 PRKRA (ENSCWAG00000001459) #14 OSBPL6 (ENSCWAG00000001227) #15 RBM45 (ENSCWAG00000001104) #16 ENSCWAG00000001084 PDE11A (ENSCWAG00000001000) #18 AGPS (ENSCWAG00000000957) #21 NFE2L2 (ENSCWAG00000000916) #22 HNRNPA3 (ENSCWAG00000000880) #23 MTX2 (ENSCWAG00000000848) #26 HOXD1 (ENSCWAG00000000831) #27 HOXD3 (ENSCWAG00000000815) #29 HOXD4 (ENSCWAG00000000799) #30 HOXD8 (ENSCWAG00000000766) #31 HOXD9 (ENSCWAG00000000750) #32 HOXD10 (ENSCWAG00000000737) #33 HOXD11 (ENSCWAG00000000728) HOXD12 (ENSCWAG00000000716) #34 HOXD13 (ENSCWAG00000000704) #35 EVX2 (ENSCWAG00000000686) #36 ENSCWAG00000000677 LNPK (ENSCWAG00000000637) #37 ENSCWAG00000000620 Pig MODERN SPECIES 6 ENSSSCG00000061723 #8 ENSSSCG00000042430 ##9 ENSSSCG00000053021 ##9 ENSSSCG00000034677 #9 ENSSSCG00000038561 ##9 ENSSSCG00000036052 ##8 PLEKHA3 (ENSSSCG00000049025) #11 FKBP7 (ENSSSCG00000015999) #12 PJVK (ENSSSCG00000015998) #13 PRKRA (ENSSSCG00000038254) #14 OSBPL6 (ENSSSCG00000023133) #15 RBM45 (ENSSSCG00000015996) #16 ENSSSCG00000047774 PDE11A (ENSSSCG00000038903) #18 AGPS (ENSSSCG00000023983) #21 NFE2L2 (ENSSSCG00000015987) #22 ENSSSCG00000015988 ##23 MTX2 (ENSSSCG00000022222) #26 HOXD1 (ENSSSCG00000015986) #27 HOXD3 (ENSSSCG00000015985) #29 HOXD4 (ENSSSCG00000015984) #30 HOXD8 (ENSSSCG00000040349) #31 HOXD9 (ENSSSCG00000015982) #32 HOXD10 (ENSSSCG00000015981) #33 HOXD11 (ENSSSCG00000034741) HOXD12 (ENSSSCG00000015980) #34 HOXD13 (ENSSSCG00000057890) #35 EVX2 (ENSSSCG00000023146) #36 ENSSSCG00000053760 ENSSSCG00000039002 LNPK (ENSSSCG00000015976) #37 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00940000153458.B ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Chiroptera ANCESTRAL SPECIES 11 ENSGT00940000153458.B ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.a ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Greater horseshoe bat MODERN SPECIES 26 ZNF385B (ENSRFEG00010018087) SESTD1 (ENSRFEG00010018265) CCDC141 (ENSRFEG00010018317) #7 ENSRFEG00010020094 ##9 PLEKHA3 (ENSRFEG00010022147) #11 FKBP7 (ENSRFEG00010022148) #12 DFNB59 (ENSRFEG00010022149) #13 PRKRA (ENSRFEG00010022150) #14 OSBPL6 (ENSRFEG00010022151) #15 RBM45 (ENSRFEG00010022152) #16 ENSRFEG00010022153 PDE11A (ENSRFEG00010022154) #18 ENSRFEG00010022156 #19 ENSRFEG00010022157 #19 ENSRFEG00010022158 #21 NFE2L2 (ENSRFEG00010022160) #22 ENSRFEG00010022161 ##23 MTX2 (ENSRFEG00010022163) #26 HOXD1 (ENSRFEG00010022164) #27 HOXD3 (ENSRFEG00010022165) #29 HOXD4 (ENSRFEG00010022166) #30 HOXD8 (ENSRFEG00010022168) #31 HOXD9 (ENSRFEG00010022169) #32 HOXD10 (ENSRFEG00010022170) #33 HOXD11 (ENSRFEG00010022171) HOXD12 (ENSRFEG00010022172) #34 HOXD13 (ENSRFEG00010022173) #35 EVX2 (ENSRFEG00010000230) #36 LNPK (ENSRFEG00010000270) #37 ENSRFEG00010000353 ATF2 (ENSRFEG00010000479) Microbat MODERN SPECIES 942 TTN (ENSMLUG00000005832) #8 ENSMLUG00000024664 ##9 PLEKHA3 (ENSMLUG00000005823) #11 FKBP7 (ENSMLUG00000005816) #12 PJVK (ENSMLUG00000005814) #13 ENSMLUG00000005810 #14 ENSMLUG00000022423 OSBPL6 (ENSMLUG00000005787) #15 RBM45 (ENSMLUG00000005782) #16 PDE11A (ENSMLUG00000005135) #18 ENSMLUG00000028755 ENSMLUG00000005133 #19 ENSMLUG00000005126 #19 AGPS (ENSMLUG00000005113) #21 ENSMLUG00000025480 NFE2L2 (ENSMLUG00000003909) #22 ENSMLUG00000003906 ##23 MTX2 (ENSMLUG00000015966) #26 ENSMLUG00000029447 #27 HOXD3 (ENSMLUG00000012510) #29 HOXD4 (ENSMLUG00000012508) #30 HOXD8 (ENSMLUG00000028864) #31 HOXD10 (ENSMLUG00000007048) #33 HOXD11 (ENSMLUG00000007030) HOXD12 (ENSMLUG00000007009) #34 HOXD13 (ENSMLUG00000006997) #35 EVX2 (ENSMLUG00000006989) #36 ENSMLUG00000022478 LNPK (ENSMLUG00000006972) #37 ENSMLUG00000012822 ATF2 (ENSMLUG00000015718) Megabat MODERN SPECIES 2191 RBM45 (ENSPVAG00000010390) #16 PDE11A (ENSPVAG00000010389) #18 ENSPVAG00000010388 #19 ENSPVAG00000010387 #19 AGPS (ENSPVAG00000010384) #21 NFE2L2 (ENSPVAG00000010382) #22 ENSPVAG00000010380 ##23 Equus ANCESTRAL SPECIES 18 ENSGT00940000153458.B ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000005569.x.a.a.b ENSGT00390000001859 #37 ENSGT00940000154298.a.a Donkey MODERN SPECIES 24 CCDC141 (ENSEASG00005022349) #7 TTN (ENSEASG00005024097) #8 ENSEASG00005036015 ##9 ENSEASG00005024821 PLEKHA3 (ENSEASG00005022419) #11 FKBP7 (ENSEASG00005022426) #12 PJVK (ENSEASG00005022430) #13 PRKRA (ENSEASG00005022436) #14 OSBPL6 (ENSEASG00005022455) #15 RBM45 (ENSEASG00005022475) #16 ENSEASG00005026887 PDE11A (ENSEASG00005022489) #18 ENSEASG00005028303 #19 AGPS (ENSEASG00005022514) #21 ENSEASG00005026944 #19 NFE2L2 (ENSEASG00005028739) #22 HNRNPA3 (ENSEASG00005022530) #23 MTX2 (ENSEASG00005022537) #26 HOXD1 (ENSEASG00005030887) #27 HOXD3 (ENSEASG00005022544) #29 HOXD4 (ENSEASG00005024806) #30 HOXD8 (ENSEASG00005033905) #31 HOXD9 (ENSEASG00005023994) #32 HOXD10 (ENSEASG00005022552) #33 HOXD11 (ENSEASG00005030904) HOXD12 (ENSEASG00005022555) #34 HOXD13 (ENSEASG00005029242) #35 EVX2 (ENSEASG00005022562) #36 ENSEASG00005022564 LNPK (ENSEASG00005022567) #37 ATP5MC3 (ENSEASG00005022573) Horse MODERN SPECIES 9 SESTD1 (ENSECAG00000011753) CCDC141 (ENSECAG00000007805) #7 TTN (ENSECAG00000042020) #8 PLEKHA3 (ENSECAG00000010715) #11 FKBP7 (ENSECAG00000008092) #12 PJVK (ENSECAG00000007310) #13 PRKRA (ENSECAG00000024263) #14 OSBPL6 (ENSECAG00000020078) #15 RBM45 (ENSECAG00000017129) #16 CYCT (ENSECAG00000016170) ENSECAG00000057854 PDE11A (ENSECAG00000004445) #18 ENSECAG00000000927 #19 ENSECAG00000051775 AGPS (ENSECAG00000008695) #21 NFE2L2 (ENSECAG00000005675) #22 HNRNPA3 (ENSECAG00000059976) #23 MTX2 (ENSECAG00000022464) #26 HOXD1 (ENSECAG00000035437) #27 HOXD3 (ENSECAG00000022129) #29 HOXD4 (ENSECAG00000038429) #30 HOXD8 (ENSECAG00000021980) #31 HOXD9 (ENSECAG00000021845) #32 HOXD10 (ENSECAG00000020599) #33 HOXD11 (ENSECAG00000003045) HOXD13 (ENSECAG00000020388) #35 EVX2 (ENSECAG00000019796) #36 ENSECAG00000043913 LNPK (ENSECAG00000008534) #37 ATP5MC3 (ENSECAG00000008514) ATF2 (ENSECAG00000018723) Carnivora ANCESTRAL SPECIES 17 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Felidae ANCESTRAL SPECIES 15 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.wb #19 ENSGT00390000010116.vb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Panthera ANCESTRAL SPECIES 9 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.wb #19 ENSGT00390000010116.vb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Tiger MODERN SPECIES 43 NFE2L2 (ENSPTIG00000007874) #22 HNRNPA3 (ENSPTIG00000008598) #23 MTX2 (ENSPTIG00000011503) #26 ENSPTIG00000013485 HOXD4 (ENSPTIG00000015199) #30 ENSPTIG00000015581 #31 ENSPTIG00000006835 #32 HOXD10 (ENSPTIG00000015771) #33 HOXD13 (ENSPTIG00000016212) #35 LNPK (ENSPTIG00000016532) #37 ATP5MC3 (ENSPTIG00000016881) ATF2 (ENSPTIG00000017517) CHN1 (ENSPTIG00000006887) CHRNA1 (ENSPTIG00000012090) WIPF1 (ENSPTIG00000016801) GPR155 (ENSPTIG00000018965) Panthera_a ANCESTRAL SPECIES 6 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.wb #19 ENSGT00390000010116.vb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 lion MODERN SPECIES 8 CWC22 (ENSPLOG00000004688) ZNF385B (ENSPLOG00000004710) SESTD1 (ENSPLOG00000004731) CCDC141 (ENSPLOG00000004750) #7 ENSPLOG00000007181 #9 PLEKHA3 (ENSPLOG00000021313) #11 FKBP7 (ENSPLOG00000021347) #12 PJVK (ENSPLOG00000021374) #13 PRKRA (ENSPLOG00000021458) #14 OSBPL6 (ENSPLOG00000021601) #15 RBM45 (ENSPLOG00000021986) #16 PDE11A (ENSPLOG00000022012) #18 ENSPLOG00000022045 #19 ENSPLOG00000022046 #19 AGPS (ENSPLOG00000022055) #21 NFE2L2 (ENSPLOG00000022123) #22 ENSPLOG00000022134 #23 MTX2 (ENSPLOG00000022148) #26 HOXD1 (ENSPLOG00000022171) #27 HOXD3 (ENSPLOG00000022176) #29 HOXD4 (ENSPLOG00000022180) #30 HOXD8 (ENSPLOG00000022192) #31 HOXD9 (ENSPLOG00000022195) #32 HOXD10 (ENSPLOG00000022198) #33 HOXD11 (ENSPLOG00000022202) HOXD12 (ENSPLOG00000022207) #34 HOXD13 (ENSPLOG00000022213) #35 EVX2 (ENSPLOG00000022219) #36 LNPK (ENSPLOG00000022229) #37 ATP5MC3 (ENSPLOG00000022249) ATF2 (ENSPLOG00000022276) leopard MODERN SPECIES 1 SESTD1 (ENSPPRG00000001855) CCDC141 (ENSPPRG00000002134) #7 ENSPPRG00000003860 #9 TTN (ENSPPRG00000010584) #8 PLEKHA3 (ENSPPRG00000011583) #11 FKBP7 (ENSPPRG00000011718) #12 PJVK (ENSPPRG00000011834) #13 ENSPPRG00000011982 #14 OSBPL6 (ENSPPRG00000015447) #15 RBM45 (ENSPPRG00000017073) #16 ENSPPRG00000017216 PDE11A (ENSPPRG00000019135) #18 ENSPPRG00000021101 #19 ENSPPRG00000021116 #19 AGPS (ENSPPRG00000020328) #21 NFE2L2 (ENSPPRG00000020872) #22 ENSPPRG00000022322 #23 MTX2 (ENSPPRG00000022475) #26 HOXD1 (ENSPPRG00000023009) #27 HOXD3 (ENSPPRG00000022847) #29 HOXD4 (ENSPPRG00000022845) #30 HOXD8 (ENSPPRG00000022672) #31 HOXD9 (ENSPPRG00000000084) #32 HOXD10 (ENSPPRG00000000139) #33 HOXD11 (ENSPPRG00000000168) HOXD12 (ENSPPRG00000000300) #34 HOXD13 (ENSPPRG00000000349) #35 EVX2 (ENSPPRG00000000389) #36 LNPK (ENSPPRG00000000436) #37 ATP5MC3 (ENSPPRG00000000490) ATF2 (ENSPPRG00000001271) Cat MODERN SPECIES 239 ENSFCAG00000049768 ##9 ENSFCAG00000046893 ##9 ENSFCAG00000050241 ##9 ENSFCAG00000032293 #9 TTN (ENSFCAG00000046559) #8 PLEKHA3 (ENSFCAG00000025945) #11 FKBP7 (ENSFCAG00000012540) #12 PJVK (ENSFCAG00000018124) #13 PRKRA (ENSFCAG00000031042) #14 OSBPL6 (ENSFCAG00000012535) #15 RBM45 (ENSFCAG00000018793) #16 PDE11A (ENSFCAG00000022207) #18 ENSFCAG00000049217 #19 ENSFCAG00000048732 #19 AGPS (ENSFCAG00000022316) #21 NFE2L2 (ENSFCAG00000012147) #22 HNRNPA3 (ENSFCAG00000012146) #23 MTX2 (ENSFCAG00000030099) #26 HOXD1 (ENSFCAG00000042171) #27 HOXD3 (ENSFCAG00000022371) #29 HOXD4 (ENSFCAG00000045772) #30 HOXD8 (ENSFCAG00000034788) #31 HOXD9 (ENSFCAG00000035038) #32 HOXD10 (ENSFCAG00000006264) #33 HOXD11 (ENSFCAG00000030594) HOXD12 (ENSFCAG00000044671) #34 HOXD13 (ENSFCAG00000030694) #35 EVX2 (ENSFCAG00000023892) #36 LNPK (ENSFCAG00000033171) #37 ATP5MC3 (ENSFCAG00000012719) ATF2 (ENSFCAG00000027595) Caniformia ANCESTRAL SPECIES 14 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Canidae ANCESTRAL SPECIES 45 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.B ##8 ENSGT01100000263523.L ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.ub #19 ENSGT00390000010116.tb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.i ENSGT00940000156582 Canis_lupus ANCESTRAL SPECIES 39 ENSGT01100000263532.A.a.a.b.b.a.a ##9 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263523.L ##8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.ub #19 ENSGT00390000010116.tb #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.i ENSGT00940000156582 Dingo MODERN SPECIES 339 ENSCAFG00020007149 #8 ENSCAFG00020007141 ##9 ENSCAFG00020007129 ##9 ENSCAFG00020007118 #9 ENSCAFG00020007110 ##8 PLEKHA3 (ENSCAFG00020007100) #11 FKBP7 (ENSCAFG00020007095) #12 PJVK (ENSCAFG00020007088) #13 ENSCAFG00020007071 #14 OSBPL6 (ENSCAFG00020007025) #15 RBM45 (ENSCAFG00020007013) #16 PDE11A (ENSCAFG00020006966) #18 ENSCAFG00020006963 #19 ENSCAFG00020006961 #19 AGPS (ENSCAFG00020006351) #21 NFE2L2 (ENSCAFG00020006313) #22 ENSCAFG00020006299 ##23 MTX2 (ENSCAFG00020006273) #26 HOXD1 (ENSCAFG00020006270) #27 HOXD3 (ENSCAFG00020006263) #29 HOXD4 (ENSCAFG00020006256) #30 HOXD8 (ENSCAFG00020006244) #31 HOXD10 (ENSCAFG00020006239) #33 HOXD11 (ENSCAFG00020006229) HOXD9 (ENSCAFG00020006227) #32 HOXD12 (ENSCAFG00020006216) #34 HOXD13 (ENSCAFG00020006212) #35 EVX2 (ENSCAFG00020006206) #36 LNPK (ENSCAFG00020006192) #37 ENSCAFG00020006176 ENSCAFG00020006151 Dog MODERN SPECIES 29 CCDC141 (ENSCAFG00845025967) #7 ENSCAFG00845025823 ##9 ENSCAFG00845025741 ##9 ENSCAFG00845025563 #9 TTN (ENSCAFG00845023220) #8 PLEKHA3 (ENSCAFG00845022559) #11 FKBP7 (ENSCAFG00845022485) #12 ENSCAFG00845022360 #14 PJVK (ENSCAFG00845022256) #13 OSBPL6 (ENSCAFG00845021295) #15 RBM45 (ENSCAFG00845020808) #16 ENSCAFG00845020768 PDE11A (ENSCAFG00845020545) #18 TTC30A (ENSCAFG00845020493) #19 AGPS (ENSCAFG00845020190) #21 NFE2L2 (ENSCAFG00845020022) #22 HNRNPA3 (ENSCAFG00845019864) #23 MTX2 (ENSCAFG00845019381) #26 HOXD1 (ENSCAFG00845019313) #27 HOXD3 (ENSCAFG00845019275) #29 HOXD4 (ENSCAFG00845019072) #30 HOXD10 (ENSCAFG00845019028) #33 HOXD9 (ENSCAFG00845018856) #32 ENSCAFG00845018802 HOXD12 (ENSCAFG00845018775) #34 HOXD13 (ENSCAFG00845018741) #35 EVX2 (ENSCAFG00845018704) #36 LNPK (ENSCAFG00845018510) #37 ENSCAFG00845018368 ATP5MC3 (ENSCAFG00845018248) ATF2 (ENSCAFG00845017708) Red fox MODERN SPECIES 15 ENSVVUG00000009921 ##9 ENSVVUG00000009932 ##9 ENSVVUG00000009947 #9 ENSVVUG00000010016 ##8 PLEKHA3 (ENSVVUG00000010019) #11 FKBP7 (ENSVVUG00000010027) #12 PJVK (ENSVVUG00000010029) #13 PRKRA (ENSVVUG00000010032) #14 OSBPL6 (ENSVVUG00000010039) #15 RBM45 (ENSVVUG00000010078) #16 PDE11A (ENSVVUG00000010094) #18 ENSVVUG00000010109 #19 AGPS (ENSVVUG00000010164) #21 ENSVVUG00000012634 #19 ENSVVUG00000012637 NFE2L2 (ENSVVUG00000012641) #22 ENSVVUG00000012651 ##23 ENSVVUG00000012682 #26 ENSVVUG00000012694 HOXD3 (ENSVVUG00000012700) #29 HOXD8 (ENSVVUG00000012714) #31 ENSVVUG00000012717 #32 HOXD10 (ENSVVUG00000012722) #33 ENSVVUG00000012726 HOXD12 (ENSVVUG00000012731) #34 HOXD13 (ENSVVUG00000012734) #35 EVX2 (ENSVVUG00000012735) #36 LNPK (ENSVVUG00000012737) #37 ATP5MC3 (ENSVVUG00000012759) ATF2 (ENSVVUG00000012774) CHN1 (ENSVVUG00000012819) Caniformia_b ANCESTRAL SPECIES 13 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Ursidae ANCESTRAL SPECIES 7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00900000143154 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00940000153147.m.a.a.a.b.b ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.m.b Ursus ANCESTRAL SPECIES 4 ENSGT00390000005421 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.b ##23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.m.b ENSGT00940000156582 Polar bear MODERN SPECIES 142 SESTD1 (ENSUMAG00000016664) CCDC141 (ENSUMAG00000016645) #7 ENSUMAG00000016620 #8 ENSUMAG00000016607 ##9 ENSUMAG00000016602 #9 ENSUMAG00000016583 ##8 PLEKHA3 (ENSUMAG00000016580) #11 FKBP7 (ENSUMAG00000016577) #12 PJVK (ENSUMAG00000016572) #13 PRKRA (ENSUMAG00000016566) #14 OSBPL6 (ENSUMAG00000016519) #15 RBM45 (ENSUMAG00000016503) #16 PDE11A (ENSUMAG00000016414) #18 ENSUMAG00000016390 #19 AGPS (ENSUMAG00000015781) #21 NFE2L2 (ENSUMAG00000015689) #22 ENSUMAG00000015686 ##23 MTX2 (ENSUMAG00000015662) #26 HOXD4 (ENSUMAG00000015658) #30 ENSUMAG00000015653 #31 HOXD10 (ENSUMAG00000015650) #33 ENSUMAG00000015649 LNPK (ENSUMAG00000015613) #37 ATP5MC3 (ENSUMAG00000015579) ATF2 (ENSUMAG00000015564) CHN1 (ENSUMAG00000015511) CHRNA1 (ENSUMAG00000015480) ENSUMAG00000015473 ENSUMAG00000015461 GPR155 (ENSUMAG00000015425) SCRN3 (ENSUMAG00000015422) American black bear MODERN SPECIES 390 NFE2L2 (ENSUAMG00000007100) #22 Giant Panda MODERN SPECIES 11 ENSAMEG00000029059 ##9 ENSAMEG00000029868 ##9 ENSAMEG00000028448 ##9 ENSAMEG00000026332 #9 ENSAMEG00000029399 ENSAMEG00000030666 ##9 PLEKHA3 (ENSAMEG00000000774) #11 FKBP7 (ENSAMEG00000027885) #12 PJVK (ENSAMEG00000000801) #13 PRKRA (ENSAMEG00000000803) #14 OSBPL6 (ENSAMEG00000000825) #15 RBM45 (ENSAMEG00000000896) #16 ENSAMEG00000023664 PDE11A (ENSAMEG00000000902) #18 AGPS (ENSAMEG00000011950) #21 NFE2L2 (ENSAMEG00000011937) #22 HNRNPA3 (ENSAMEG00000011920) #23 ENSAMEG00000019906 MTX2 (ENSAMEG00000001799) #26 HOXD1 (ENSAMEG00000028345) #27 HOXD3 (ENSAMEG00000026957) #29 HOXD4 (ENSAMEG00000025663) #30 HOXD8 (ENSAMEG00000023565) #31 HOXD9 (ENSAMEG00000029987) #32 HOXD10 (ENSAMEG00000001849) #33 ENSAMEG00000025193 HOXD12 (ENSAMEG00000023609) #34 HOXD13 (ENSAMEG00000001865) #35 EVX2 (ENSAMEG00000001868) #36 LNPK (ENSAMEG00000001869) #37 ATP5MC3 (ENSAMEG00000012367) Mustelinae ANCESTRAL SPECIES 21 ENSGT00940000153458.B ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a.a.b.a.b #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 American mink MODERN SPECIES 222 ENSNVIG00000006216 #9 ENSNVIG00000006230 ##9 ENSNVIG00000006244 #9 ENSNVIG00000006252 ENSNVIG00000006264 #8 PLEKHA3 (ENSNVIG00000006265) #11 FKBP7 (ENSNVIG00000006271) #12 PJVK (ENSNVIG00000006274) #13 PRKRA (ENSNVIG00000006320) #14 OSBPL6 (ENSNVIG00000006388) #15 RBM45 (ENSNVIG00000006823) #16 ENSNVIG00000006839 PDE11A (ENSNVIG00000006854) #18 ENSNVIG00000006929 ##24 AGPS (ENSNVIG00000006950) #21 NFE2L2 (ENSNVIG00000006995) #22 HNRNPA3 (ENSNVIG00000007022) #23 MTX2 (ENSNVIG00000007075) #26 HOXD1 (ENSNVIG00000007113) #27 HOXD3 (ENSNVIG00000007128) #29 HOXD4 (ENSNVIG00000007138) #30 ENSNVIG00000007149 #31 HOXD9 (ENSNVIG00000007158) #32 HOXD10 (ENSNVIG00000007162) #33 ENSNVIG00000007170 HOXD12 (ENSNVIG00000007175) #34 HOXD13 (ENSNVIG00000007186) #35 EVX2 (ENSNVIG00000007198) #36 LNPK (ENSNVIG00000007208) #37 Ferret MODERN SPECIES 359 AGPS (ENSMPUG00000014173) #21 ENSMPUG00000014172 ENSMPUG00000014168 #22 ENSMPUG00000014103 ##23 ENSMPUG00000014101 MTX2 (ENSMPUG00000014094) #26 ENSMPUG00000014088 HOXD1 (ENSMPUG00000014084) #27 ENSMPUG00000014080 HOXD3 (ENSMPUG00000014072) #29 HOXD4 (ENSMPUG00000014070) #30 ENSMPUG00000014067 ENSMPUG00000014060 #31 HOXD9 (ENSMPUG00000014053) #32 HOXD10 (ENSMPUG00000014049) #33 HOXD11 (ENSMPUG00000014029) HOXD12 (ENSMPUG00000014025) #34 HOXD13 (ENSMPUG00000014022) #35 Atlantogenata ANCESTRAL SPECIES 9 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 Xenarthra ANCESTRAL SPECIES 11 ENSGT00390000005421 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000164264 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.m.a.a #23 ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a ENSGT00940000156582 ENSGT01030000234635.a.b.a.b.b.a.a Sloth MODERN SPECIES 1509 NFE2L2 (ENSCHOG00000005792) #22 Armadillo MODERN SPECIES 3580 ENSDNOG00000019250 SESTD1 (ENSDNOG00000014724) CCDC141 (ENSDNOG00000031268) #7 ENSDNOG00000048097 #8 ENSDNOG00000031177 #9 PLEKHA3 (ENSDNOG00000002717) #11 FKBP7 (ENSDNOG00000035521) #12 PJVK (ENSDNOG00000019700) #13 PRKRA (ENSDNOG00000019701) #14 OSBPL6 (ENSDNOG00000016352) #15 RBM45 (ENSDNOG00000001973) #16 ENSDNOG00000016006 ENSDNOG00000032224 #19 ENSDNOG00000044838 #19 AGPS (ENSDNOG00000032919) #21 NFE2L2 (ENSDNOG00000019020) #22 HNRNPA3 (ENSDNOG00000019022) #23 MTX2 (ENSDNOG00000034659) #26 HOXD1 (ENSDNOG00000019807) #27 HOXD3 (ENSDNOG00000035593) #29 HOXD4 (ENSDNOG00000019805) #30 HOXD8 (ENSDNOG00000036145) #31 HOXD10 (ENSDNOG00000034389) #33 HOXD11 (ENSDNOG00000044260) HOXD12 (ENSDNOG00000047700) #34 HOXD13 (ENSDNOG00000019799) #35 EVX2 (ENSDNOG00000019797) #36 ENSDNOG00000045361 LNPK (ENSDNOG00000039308) #37 ENSDNOG00000044678 ATF2 (ENSDNOG00000015229) Afrotheria ANCESTRAL SPECIES 1 ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000154808.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.e ENSGT00940000156582 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT01100000263532.A.a.a.a.b.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116.p #19 ENSGT00390000010116.o #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000154808.a.a ENSGT00950000182919.C #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.e ENSGT00940000156582 ENSGT01030000234635.a.b.a.b.b.a.a Elephant MODERN SPECIES 301 SESTD1 (ENSLAFG00000010863) ENSLAFG00000016368 #7 ENSLAFG00000030749 #8 ENSLAFG00000016250 ##9 PLEKHA3 (ENSLAFG00000006385) #11 FKBP7 (ENSLAFG00000016244) #12 PJVK (ENSLAFG00000016082) #13 PRKRA (ENSLAFG00000026940) #14 OSBPL6 (ENSLAFG00000011141) #15 RBM45 (ENSLAFG00000007464) #16 ENSLAFG00000027524 PDE11A (ENSLAFG00000005234) #18 ENSLAFG00000005704 #19 ENSLAFG00000014996 #19 AGPS (ENSLAFG00000014990) #21 NFE2L2 (ENSLAFG00000016263) #22 ENSLAFG00000027712 MTX2 (ENSLAFG00000013982) #26 HOXD3 (ENSLAFG00000005477) #29 HOXD4 (ENSLAFG00000005480) #30 HOXD8 (ENSLAFG00000004364) #31 HOXD9 (ENSLAFG00000011494) #32 HOXD10 (ENSLAFG00000013262) #33 HOXD12 (ENSLAFG00000017497) #34 HOXD13 (ENSLAFG00000027629) #35 EVX2 (ENSLAFG00000013264) #36 LNPK (ENSLAFG00000004502) #37 ENSLAFG00000010768 ATF2 (ENSLAFG00000006463) CHN1 (ENSLAFG00000011074) CHRNA1 (ENSLAFG00000011067) Hyrax MODERN SPECIES 1360 NFE2L2 (ENSPCAG00000013845) #22 Tenrec MODERN SPECIES 14990 NFE2L2 (ENSETEG00000001387) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000153458.B.b ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147 #23 ENSGT00950000182919.C.k #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00940000173501 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000153458.B.b ENSGT00940000155611.s ENSGT00730000111148 ENSGT00440000038972 #7 ENSGT01100000263523.A #8 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147 #23 ENSGT00950000182919.C.k #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00940000173501 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Diprotodontia ANCESTRAL SPECIES 11 ENSGT01100000263532.A.a.a.b.b.a.b ##9 ENSGT01100000263532.A.a.a.a.b.c.b.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.A.a.a.a.b.c.b.a ##9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850 #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.o.a #23 ENSGT00950000182919.C.k #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00940000173501 ENSGT00390000001859 #37 ENSGT00940000154298.a.a Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT01100000263532.A.a.a.a.b.c.b.b ##9 ENSGT01100000263532.A.a.a.a.b.c.a #9 ENSGT01100000263532.A.a.a.a.b.c.b.a ##9 ENSGT01100000263532.C.c.b ##9 ENSGT00940000155850.fb #11 ENSGT00940000159964 #12 ENSGT00950000183140.a.b #13 ENSGT00940000157618 #14 ENSGT00940000156791 #15 ENSGT00680000100059 #16 ENSGT00940000157883.a.b.e.a ENSGT00940000162151 #18 ENSGT00390000010116 #19 ENSGT00940000156112 #21 ENSGT00390000006051.d.b.a.a ENSGT00950000182892.a.a.b #22 ENSGT00940000153147.o.a #23 ENSGT00950000182919.C.k.a #26 ENSGT00940000161892 #27 ENSGT00940000160027 #29 ENSGT00940000157270 #30 ENSGT00940000161653 #31 ENSGT00940000161503 #32 ENSGT00940000158266 #33 ENSGT00940000161308 ENSGT00940000159938 #34 ENSGT00940000161457 #35 ENSGT00940000161025 #36 ENSGT00940000173501 ENSGT00390000001859 #37 ENSGT00940000154298.a.a.a Common wonbat MODERN SPECIES 1018 ENSVURG00010018699 #8 ENSVURG00010018702 ##9 ENSVURG00010018707 #9 ENSVURG00010018717 ##9 ENSVURG00010018731 ##9 FKBP7 (ENSVURG00010018739) #12 PJVK (ENSVURG00010018750) #13 PRKRA (ENSVURG00010018771) #14 OSBPL6 (ENSVURG00010018808) #15 RBM45 (ENSVURG00010018862) #16 ENSVURG00010018867 PDE11A (ENSVURG00010018883) #18 ENSVURG00010018908 #19 AGPS (ENSVURG00010018947) #21 ENSVURG00010019089 NFE2L2 (ENSVURG00010019096) #22 ENSVURG00010019105 #23 ENSVURG00010019134 ENSVURG00010019141 #26 HOXD1 (ENSVURG00010019147) #27 HOXD3 (ENSVURG00010019148) #29 HOXD4 (ENSVURG00010019150) #30 HOXD8 (ENSVURG00010019156) #31 HOXD9 (ENSVURG00010019159) #32 HOXD10 (ENSVURG00010019165) #33 ENSVURG00010019168 HOXD12 (ENSVURG00010019173) #34 HOXD13 (ENSVURG00010019176) #35 EVX2 (ENSVURG00010019179) #36 LNPK (ENSVURG00010019192) #37 ENSVURG00010019213 koala MODERN SPECIES 40 ENSPCIG00000011294 ##9 ENSPCIG00000035928 ##9 ENSPCIG00000011306 #9 ENSPCIG00000025366 ##9 ENSPCIG00000025368 #11 FKBP7 (ENSPCIG00000025369) #12 PJVK (ENSPCIG00000025370) #13 PRKRA (ENSPCIG00000025371) #14 OSBPL6 (ENSPCIG00000025378) #15 ENSPCIG00000025391 RBM45 (ENSPCIG00000025402) #16 PDE11A (ENSPCIG00000025405) #18 ENSPCIG00000025413 #19 AGPS (ENSPCIG00000025418) #21 ENSPCIG00000025432 NFE2L2 (ENSPCIG00000025438) #22 ENSPCIG00000025443 #23 ENSPCIG00000035345 ENSPCIG00000034180 MTX2 (ENSPCIG00000006277) #26 HOXD1 (ENSPCIG00000026501) #27 HOXD4 (ENSPCIG00000026503) #30 HOXD3 (ENSPCIG00000026502) #29 HOXD8 (ENSPCIG00000029145) #31 HOXD9 (ENSPCIG00000033878) #32 HOXD10 (ENSPCIG00000029143) #33 ENSPCIG00000034132 HOXD12 (ENSPCIG00000029141) #34 HOXD13 (ENSPCIG00000029140) #35 EVX2 (ENSPCIG00000029139) #36 ENSPCIG00000034586 Wallaby MODERN SPECIES 11787 NFE2L2 (ENSMEUG00000009798) #22 Tasmanian devil MODERN SPECIES 2 CCDC141 (ENSSHAG00000012666) #7 ENSSHAG00000011991 ##9 ENSSHAG00000023191 ##9 ENSSHAG00000021730 ##9 ENSSHAG00000026623 #9 PLEKHA3 (ENSSHAG00000010292) #11 FKBP7 (ENSSHAG00000010178) #12 PJVK (ENSSHAG00000010083) #13 PRKRA (ENSSHAG00000028806) #14 OSBPL6 (ENSSHAG00000007874) #15 RBM45 (ENSSHAG00000005667) #16 ENSSHAG00000005285 PDE11A (ENSSHAG00000030320) #18 AGPS (ENSSHAG00000018507) #21 ENSSHAG00000022926 #19 NFE2L2 (ENSSHAG00000018277) #22 HNRNPA3 (ENSSHAG00000022116) #23 MTX2 (ENSSHAG00000016381) #26 HOXD1 (ENSSHAG00000016187) #27 HOXD4 (ENSSHAG00000024760) #30 HOXD3 (ENSSHAG00000024332) #29 HOXD8 (ENSSHAG00000026470) #31 HOXD9 (ENSSHAG00000021426) #32 HOXD10 (ENSSHAG00000016004) #33 HOXD11 (ENSSHAG00000021515) HOXD12 (ENSSHAG00000021387) #34 HOXD13 (ENSSHAG00000015915) #35 EVX2 (ENSSHAG00000015873) #36 LNPK (ENSSHAG00000031133) #37 ATP5MC3 (ENSSHAG00000028674) ATF2 (ENSSHAG00000029247) Opossum MODERN SPECIES 3 ENSMODG00000042738 ##9 ENSMODG00000047084 ##9 ENSMODG00000039210 ##9 PLEKHA3 (ENSMODG00000009871) #11 FKBP7 (ENSMODG00000009862) #12 PJVK (ENSMODG00000009854) #13 PRKRA (ENSMODG00000009823) #14 OSBPL6 (ENSMODG00000009796) #15 RBM45 (ENSMODG00000009742) #16 ENSMODG00000029563 ENSMODG00000037708 PDE11A (ENSMODG00000036430) #18 ENSMODG00000048807 #19 ENSMODG00000048757 AGPS (ENSMODG00000009686) #21 NFE2L2 (ENSMODG00000009624) #22 MTX2 (ENSMODG00000009617) #26 HOXD1 (ENSMODG00000009604) #27 HOXD3 (ENSMODG00000046524) #29 HOXD4 (ENSMODG00000009598) #30 HOXD8 (ENSMODG00000009593) #31 HOXD9 (ENSMODG00000009591) #32 HOXD10 (ENSMODG00000009577) #33 HOXD11 (ENSMODG00000009565) HOXD12 (ENSMODG00000024741) #34 HOXD13 (ENSMODG00000009550) #35 EVX2 (ENSMODG00000009546) #36 ENSMODG00000009536 #37 ENSMODG00000047401 ENSMODG00000009520 ATF2 (ENSMODG00000009514)