Amniota DUPLICATION Amniota ANCESTRAL SPECIES 6 ENSGT00940000154486.b.a.a.b ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000159677.c.a ##11 ENSGT00940000159677.c.b.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00940000156462.B ##29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 Mammalia ANCESTRAL SPECIES 7 ENSGT00940000160683 ENSGT00940000161997.a ENSGT00940000154486.b.b ENSGT00940000154486.b.a.a.b ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.d #11 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 Theria ANCESTRAL SPECIES 65 ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000161996 ENSGT00940000157440 ENSGT00390000016151 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000159677.d #11 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 Eutheria ANCESTRAL SPECIES 10 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Glires ANCESTRAL SPECIES 14 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Myomorpha ANCESTRAL SPECIES 10 ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764.b ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Muroidea ANCESTRAL SPECIES 20 ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764.b ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Muroidea_A ANCESTRAL SPECIES 19 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Murinae ANCESTRAL SPECIES 9 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Mus ANCESTRAL SPECIES 5 ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000162976.g ENSGT00940000163976 ENSGT00940000162976.f ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00860000136022 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Mus_A ANCESTRAL SPECIES 5 ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976.g ENSGT00940000162976.f ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00860000136022 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.q #36 ENSGT00940000157773 ENSGT00940000156970 Mus_B ANCESTRAL SPECIES 7 ENSGT00940000163976.g.b ENSGT00940000163976.g.a ENSGT00940000163976.h ENSGT00940000163820 ENSGT00940000162976.g ENSGT00940000162976.f ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00860000136022 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.q #36 ENSGT00940000157773 ENSGT00940000156970 Mus_C ANCESTRAL SPECIES 1 ENSGT00940000157267 ENSGT00940000163976.g.a ENSGT00940000163976.h ENSGT00940000163820 ENSGT00940000162976.g ENSGT00940000162976.f ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00860000136022 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.q #36 ENSGT00940000157773 ENSGT00940000156970 Steppe mouse MODERN SPECIES 3264 Dnajb3 (ENSMSIG00000026596) #10 Ugt1a1 (ENSMSIG00000026581) #11 Mroh2a (ENSMSIG00000026486) #12 ENSMSIG00000026481 #13 Hjurp (ENSMSIG00000026452) #14 Trpm8 (ENSMSIG00000026361) #15 Spp2 (ENSMSIG00000026338) #16 ENSMSIG00000026335 #17 ENSMSIG00000026330 #18 Arl4c (ENSMSIG00000026322) #19 Sh3bp4 (ENSMSIG00000026285) #20 ENSMSIG00000026271 #21 Agap1 (ENSMSIG00000026135) #22 Gbx2 (ENSMSIG00000026131) #23 Asb18 (ENSMSIG00000026105) #24 Iqca (ENSMSIG00000026003) #25 Ackr3 (ENSMSIG00000025992) #26 Cops8 (ENSMSIG00000025975) #27 ENSMSIG00000025965 #28 Col6a3 (ENSMSIG00000025643) #29 Mlph (ENSMSIG00000025599) #30 Prlh (ENSMSIG00000025590) #31 ENSMSIG00000025514 #32 Lrrfip1 (ENSMSIG00000025383) #33 Rbm44 (ENSMSIG00000025367) #34 ENSMSIG00000025346 #35 Ube2f (ENSMSIG00000025282) #36 ENSMSIG00000025274 #37 spretus MODERN SPECIES Ugt1a8 (MGP_SPRETEiJ_G0015193) MGP_SPRETEiJ_G0015194 MGP_SPRETEiJ_G0015196 MGP_SPRETEiJ_G0015195 Ugt1a5 (MGP_SPRETEiJ_G0015197) Ugt1a2 (MGP_SPRETEiJ_G0015198) Dnajb3 (MGP_SPRETEiJ_G0015199) #10 Ugt1a1 (MGP_SPRETEiJ_G0015200) #11 Mroh2a (MGP_SPRETEiJ_G0015201) #12 Hjurp (MGP_SPRETEiJ_G0015202) #14 Trpm8 (MGP_SPRETEiJ_G0015203) #15 Spp2 (MGP_SPRETEiJ_G0015204) #16 MGP_SPRETEiJ_G0015205 Arl4c (MGP_SPRETEiJ_G0015206) #19 Sh3bp4 (MGP_SPRETEiJ_G0015207) #20 MGP_SPRETEiJ_G0015208 #22 Gbx2 (MGP_SPRETEiJ_G0015209) #23 Asb18 (MGP_SPRETEiJ_G0015210) #24 Iqca (MGP_SPRETEiJ_G0015211) #25 MGP_SPRETEiJ_G0015212 Cops8 (MGP_SPRETEiJ_G0015213) #27 Col6a3 (MGP_SPRETEiJ_G0015214) #29 Mlph (MGP_SPRETEiJ_G0015215) #30 Prlh (MGP_SPRETEiJ_G0015216) #31 Rab17 (MGP_SPRETEiJ_G0015217) #32 Lrrfip1 (MGP_SPRETEiJ_G0015218) #33 Rbm44 (MGP_SPRETEiJ_G0015219) #34 Ramp1 (MGP_SPRETEiJ_G0015220) Ube2f (MGP_SPRETEiJ_G0015221) #36 Scly (MGP_SPRETEiJ_G0015222) Espnl (MGP_SPRETEiJ_G0015223) Mouse MODERN SPECIES Ugt1a8 (ENSMUSG00000089675) Ugt1a7c (ENSMUSG00000090124) Ugt1a6b (ENSMUSG00000090145) Ugt1a6a (ENSMUSG00000054545) Ugt1a5 (ENSMUSG00000089943) Ugt1a2 (ENSMUSG00000090171) Dnajb3 (ENSMUSG00000081984) #10 Ugt1a1 (ENSMUSG00000089960) #11 Mroh2a (ENSMUSG00000079429) #12 Hjurp (ENSMUSG00000044783) #14 Trpm8 (ENSMUSG00000036251) #15 Spp2 (ENSMUSG00000026295) #16 Glrp1 (ENSMUSG00000062310) Arl4c (ENSMUSG00000049866) #19 Sh3bp4 (ENSMUSG00000036206) #20 Agap1 (ENSMUSG00000055013) #22 Gbx2 (ENSMUSG00000034486) #23 Asb18 (ENSMUSG00000067081) #24 Iqca (ENSMUSG00000026301) #25 Ackr3 (ENSMUSG00000044337) #26 Cops8 (ENSMUSG00000034432) #27 Col6a3 (ENSMUSG00000048126) #29 Mlph (ENSMUSG00000026303) #30 Prlh (ENSMUSG00000090550) #31 Rab17 (ENSMUSG00000026304) #32 Lrrfip1 (ENSMUSG00000026305) #33 Rbm44 (ENSMUSG00000070732) #34 Ramp1 (ENSMUSG00000034353) Ube2f (ENSMUSG00000034343) #36 Scly (ENSMUSG00000026307) Espnl (ENSMUSG00000049515) Ryukyu mouse MODERN SPECIES MGP_CAROLIEiJ_G0014389 MGP_CAROLIEiJ_G0014391 MGP_CAROLIEiJ_G0014390 MGP_CAROLIEiJ_G0014392 Ugt1a5 (MGP_CAROLIEiJ_G0014393) Ugt1a2 (MGP_CAROLIEiJ_G0014394) Dnajb3 (MGP_CAROLIEiJ_G0014395) #10 Ugt1a1 (MGP_CAROLIEiJ_G0014396) #11 MGP_CAROLIEiJ_G0014397 #12 Hjurp (MGP_CAROLIEiJ_G0014398) #14 Trpm8 (MGP_CAROLIEiJ_G0014399) #15 Spp2 (MGP_CAROLIEiJ_G0014400) #16 MGP_CAROLIEiJ_G0014401 Arl4c (MGP_CAROLIEiJ_G0014402) #19 Sh3bp4 (MGP_CAROLIEiJ_G0014403) #20 MGP_CAROLIEiJ_G0014404 #22 Gbx2 (MGP_CAROLIEiJ_G0014405) #23 Asb18 (MGP_CAROLIEiJ_G0014406) #24 Iqca (MGP_CAROLIEiJ_G0014407) #25 Ackr3 (MGP_CAROLIEiJ_G0014408) #26 Cops8 (MGP_CAROLIEiJ_G0014409) #27 Col6a3 (MGP_CAROLIEiJ_G0014410) #29 Mlph (MGP_CAROLIEiJ_G0014411) #30 Prlh (MGP_CAROLIEiJ_G0014412) #31 Rab17 (MGP_CAROLIEiJ_G0014413) #32 Lrrfip1 (MGP_CAROLIEiJ_G0014414) #33 MGP_CAROLIEiJ_G0014415 #34 Ramp1 (MGP_CAROLIEiJ_G0014416) Ube2f (MGP_CAROLIEiJ_G0014417) #36 Scly (MGP_CAROLIEiJ_G0014418) Espnl (MGP_CAROLIEiJ_G0014419) Shrew mouse MODERN SPECIES 18 Usp40 (MGP_PahariEiJ_G0027625) MGP_PahariEiJ_G0027626 MGP_PahariEiJ_G0027627 MGP_PahariEiJ_G0027628 MGP_PahariEiJ_G0027629 Ugt1a2 (MGP_PahariEiJ_G0027630) Dnajb3 (MGP_PahariEiJ_G0027631) #10 Ugt1a1 (MGP_PahariEiJ_G0027632) #11 Mroh2a (MGP_PahariEiJ_G0027633) #12 Hjurp (MGP_PahariEiJ_G0027634) #14 Trpm8 (MGP_PahariEiJ_G0027635) #15 Spp2 (MGP_PahariEiJ_G0027636) #16 MGP_PahariEiJ_G0027637 Arl4c (MGP_PahariEiJ_G0027638) #19 Sh3bp4 (MGP_PahariEiJ_G0027639) #20 MGP_PahariEiJ_G0027640 #22 Gbx2 (MGP_PahariEiJ_G0027641) #23 Asb18 (MGP_PahariEiJ_G0027642) #24 Iqca (MGP_PahariEiJ_G0027643) #25 Ackr3 (MGP_PahariEiJ_G0027644) #26 Cops8 (MGP_PahariEiJ_G0027645) #27 Col6a3 (MGP_PahariEiJ_G0027646) #29 Mlph (MGP_PahariEiJ_G0027647) #30 MGP_PahariEiJ_G0027648 #31 MGP_PahariEiJ_G0027649 #32 Lrrfip1 (MGP_PahariEiJ_G0027650) #33 Rbm44 (MGP_PahariEiJ_G0027651) #34 Ramp1 (MGP_PahariEiJ_G0027652) MGP_PahariEiJ_G0027653 #36 Scly (MGP_PahariEiJ_G0027654) Espnl (MGP_PahariEiJ_G0027655) Rat MODERN SPECIES 19 Neu2 (ENSRNOG00000016962) Inpp5d (ENSRNOG00000017020) Atg16l1 (ENSRNOG00000017913) Sag (ENSRNOG00000018185) Dgkd (ENSRNOG00000023238) Usp40 (ENSRNOG00000018395) Ugt1a8 (ENSRNOG00000018740) #11 Dnajb3 (ENSRNOG00000023172) #10 Mroh2a (ENSRNOG00000042182) #12 Hjurp (ENSRNOG00000022911) #14 Trpm8 (ENSRNOG00000019035) #15 Spp2 (ENSRNOG00000053244) #16 Arl4c (ENSRNOG00000069663) #19 Sh3bp4 (ENSRNOG00000019316) #20 ENSRNOG00000067510 Agap1 (ENSRNOG00000019476) #22 Gbx2 (ENSRNOG00000019495) #23 Asb18 (ENSRNOG00000019557) #24 Iqca1 (ENSRNOG00000019592) #25 Ackr3 (ENSRNOG00000019622) #26 Cops8 (ENSRNOG00000019635) #27 Col6a3 (ENSRNOG00000019648) #29 Mlph (ENSRNOG00000019763) #30 Prlh (ENSRNOG00000019871) #31 Rab17 (ENSRNOG00000052979) #32 Lrrfip1 (ENSRNOG00000019892) #33 Rbm44 (ENSRNOG00000024878) #34 ENSRNOG00000066608 Ramp1 (ENSRNOG00000019926) Ube2f (ENSRNOG00000019953) #36 Scly (ENSRNOG00000020083) Cricetidae ANCESTRAL SPECIES 19 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a.h ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764.b ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Cricetinae ANCESTRAL SPECIES 3 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a.h ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Golden Hamster MODERN SPECIES 741 Snorc (ENSMAUG00000019733) ENSMAUG00000016226 Neu2 (ENSMAUG00000011638) Inpp5d (ENSMAUG00000007862) Atg16l1 (ENSMAUG00000000887) Sag (ENSMAUG00000009306) ENSMAUG00000013820 ENSMAUG00000018423 Dnajb3 (ENSMAUG00000006882) #10 Ugt1a1 (ENSMAUG00000003905) #11 Mroh2a (ENSMAUG00000019179) #12 Hjurp (ENSMAUG00000017670) #14 ENSMAUG00000020036 #15 Spp2 (ENSMAUG00000019000) #16 Sh3bp4 (ENSMAUG00000015955) #20 Agap1 (ENSMAUG00000013197) #22 Gbx2 (ENSMAUG00000021102) #23 Asb18 (ENSMAUG00000011343) #24 Iqca (ENSMAUG00000012478) #25 Ackr3 (ENSMAUG00000001290) #26 Cops8 (ENSMAUG00000016566) #27 Col6a3 (ENSMAUG00000018474) #29 Mlph (ENSMAUG00000012730) #30 Prlh (ENSMAUG00000007380) #31 Rab17 (ENSMAUG00000000642) #32 ENSMAUG00000008054 #33 Rbm44 (ENSMAUG00000022041) #34 Ramp1 (ENSMAUG00000013655) ENSMAUG00000011807 Ube2f (ENSMAUG00000016797) #36 Scly (ENSMAUG00000015726) Chinese hamster chok1gshd MODERN SPECIES 1 Atg16l1 (ENSCGRG00001024596) Sag (ENSCGRG00001024487) Dgkd (ENSCGRG00001024793) Usp40 (ENSCGRG00001007804) ENSCGRG00001000882 Dnajb3 (ENSCGRG00001009691) #10 Mroh2a (ENSCGRG00001000590) #12 Hjurp (ENSCGRG00001024392) #14 Trpm8 (ENSCGRG00001024258) #15 Spp2 (ENSCGRG00001024730) #16 Arl4c (ENSCGRG00001010866) #19 ENSCGRG00001024628 Sh3bp4 (ENSCGRG00001009956) #20 ENSCGRG00001024137 ENSCGRG00001009648 Agap1 (ENSCGRG00001001480) #22 Gbx2 (ENSCGRG00001024158) #23 Asb18 (ENSCGRG00001024506) #24 Iqca (ENSCGRG00001024459) #25 Ackr3 (ENSCGRG00001010122) #26 Cops8 (ENSCGRG00001024515) #27 Col6a3 (ENSCGRG00001024539) #29 ENSCGRG00001024654 #33 Rbm44 (ENSCGRG00001001293) #34 Ramp1 (ENSCGRG00001024580) ENSCGRG00001010672 #36 Scly (ENSCGRG00001024710) Espnl (ENSCGRG00001024719) Klhl30 (ENSCGRG00001024698) Erfe (ENSCGRG00001003481) Ilkap (ENSCGRG00001007174) Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a.h ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764.b ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Prairie vole MODERN SPECIES 354 Ngef (ENSMOCG00000019945) Neu2 (ENSMOCG00000016430) Inpp5d (ENSMOCG00000020774) Atg16l1 (ENSMOCG00000022107) Sag (ENSMOCG00000010548) Dgkd (ENSMOCG00000013358) Usp40 (ENSMOCG00000013866) Dnajb3 (ENSMOCG00000005295) #10 Ugt1a1 (ENSMOCG00000006377) #11 Mroh2a (ENSMOCG00000016439) #12 Hjurp (ENSMOCG00000013256) #14 Trpm8 (ENSMOCG00000011314) #15 Spp2 (ENSMOCG00000019546) #16 Arl4c (ENSMOCG00000006232) #19 Sh3bp4 (ENSMOCG00000008692) #20 Agap1 (ENSMOCG00000017793) #22 Gbx2 (ENSMOCG00000000815) #23 ENSMOCG00000022588 Asb18 (ENSMOCG00000021264) #24 Iqca (ENSMOCG00000001121) #25 Ackr3 (ENSMOCG00000011622) #26 ENSMOCG00000010460 #27 Col6a3 (ENSMOCG00000012323) #29 Mlph (ENSMOCG00000002134) #30 Prlh (ENSMOCG00000018025) #31 Rab17 (ENSMOCG00000006448) #32 ENSMOCG00000017590 #33 Rbm44 (ENSMOCG00000001523) #34 Ramp1 (ENSMOCG00000020434) Ube2f (ENSMOCG00000015739) #36 Scly (ENSMOCG00000000935) Northern American deer mouse MODERN SPECIES 4 Sag (ENSPEMG00000004231) Dgkd (ENSPEMG00000009119) Usp40 (ENSPEMG00000013853) Ugt1a1 (ENSPEMG00000023160) #11 ENSPEMG00000031422 Dnajb3 (ENSPEMG00000002492) #10 Mroh2a (ENSPEMG00000015776) #12 ENSPEMG00000021817 #14 ENSPEMG00000025738 #14 Trpm8 (ENSPEMG00000022258) #15 Spp2 (ENSPEMG00000024148) #16 ENSPEMG00000026110 Arl4c (ENSPEMG00000006610) #19 Sh3bp4 (ENSPEMG00000022888) #20 ENSPEMG00000028272 Agap1 (ENSPEMG00000021872) #22 Gbx2 (ENSPEMG00000024862) #23 Asb18 (ENSPEMG00000021968) #24 Iqca (ENSPEMG00000023730) #25 Ackr3 (ENSPEMG00000022737) #26 Cops8 (ENSPEMG00000022562) #27 Col6a3 (ENSPEMG00000023168) #29 Mlph (ENSPEMG00000010755) #30 Prlh (ENSPEMG00000022011) #31 Rab17 (ENSPEMG00000022598) #32 ENSPEMG00000022605 #33 Rbm44 (ENSPEMG00000022866) #34 Ramp1 (ENSPEMG00000030486) Ube2f (ENSPEMG00000023549) #36 Scly (ENSPEMG00000021410) Espnl (ENSPEMG00000022478) Upper Galilee mountains blind mole rat MODERN SPECIES 1843 Agap1 (ENSNGAG00000014729) #22 Gbx2 (ENSNGAG00000011592) #23 ENSNGAG00000016636 #24 Iqca (ENSNGAG00000021300) #25 Ackr3 (ENSNGAG00000019155) #26 Cops8 (ENSNGAG00000012304) #27 Col6a3 (ENSNGAG00000014907) #29 Mlph (ENSNGAG00000010976) #30 Prlh (ENSNGAG00000000550) #31 Rab17 (ENSNGAG00000020760) #32 ENSNGAG00000010993 #33 Rbm44 (ENSNGAG00000017208) #34 Ramp1 (ENSNGAG00000007276) Lesser Egyptian jerboa MODERN SPECIES 90 ENSJJAG00000022856 Ngef (ENSJJAG00000016912) Neu2 (ENSJJAG00000019484) Inpp5d (ENSJJAG00000022473) Atg16l1 (ENSJJAG00000015516) Sag (ENSJJAG00000018663) Dgkd (ENSJJAG00000017454) Ugt1a1 (ENSJJAG00000008443) #11 Mroh2a (ENSJJAG00000016234) #12 ENSJJAG00000015930 #14 Trpm8 (ENSJJAG00000021473) #15 Spp2 (ENSJJAG00000019044) #16 Arl4c (ENSJJAG00000010006) #19 ENSJJAG00000018097 Sh3bp4 (ENSJJAG00000024353) #20 Agap1 (ENSJJAG00000013750) #22 Gbx2 (ENSJJAG00000012862) #23 Iqca (ENSJJAG00000018469) #25 Ackr3 (ENSJJAG00000007446) #26 ENSJJAG00000012612 #27 Col6a3 (ENSJJAG00000022723) #29 Mlph (ENSJJAG00000016422) #30 Prlh (ENSJJAG00000010297) #31 Rab17 (ENSJJAG00000016906) #32 Lrrfip1 (ENSJJAG00000018949) #33 ENSJJAG00000021774 #33 Ramp1 (ENSJJAG00000015227) ENSJJAG00000015457 #36 ENSJJAG00000023531 #36 Steap4 (ENSJJAG00000016754) ENSJJAG00000022868 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 320 ENSDORG00000026631 Neu2 (ENSDORG00000025920) Inpp5d (ENSDORG00000015370) Atg16l1 (ENSDORG00000000191) Sag (ENSDORG00000000192) Dgkd (ENSDORG00000013135) ENSDORG00000026319 ENSDORG00000007480 ENSDORG00000024133 #10 ENSDORG00000029743 #10 Mroh2a (ENSDORG00000007483) #12 Trpm8 (ENSDORG00000001000) #15 Spp2 (ENSDORG00000025268) #16 Arl4c (ENSDORG00000028955) #19 Sh3bp4 (ENSDORG00000008492) #20 ENSDORG00000028590 #22 ENSDORG00000005374 #22 Gbx2 (ENSDORG00000026040) #23 Iqca (ENSDORG00000014321) #25 Ackr3 (ENSDORG00000007573) #26 ENSDORG00000013459 #27 Col6a3 (ENSDORG00000016705) #29 Mlph (ENSDORG00000011783) #30 Prlh (ENSDORG00000015671) #31 Rab17 (ENSDORG00000028745) #32 ENSDORG00000013588 #33 Ramp1 (ENSDORG00000024593) Ube2f (ENSDORG00000009774) #36 Scly (ENSDORG00000013372) Espnl (ENSDORG00000013375) Klhl30 (ENSDORG00000013380) Kangaroo rat MODERN SPECIES 320 Neu2 (ENSDORG00000025920) Inpp5d (ENSDORG00000015370) Atg16l1 (ENSDORG00000000191) Sag (ENSDORG00000000192) Dgkd (ENSDORG00000013135) ENSDORG00000026319 ENSDORG00000007480 ENSDORG00000024133 #10 ENSDORG00000029743 #10 Mroh2a (ENSDORG00000007483) #12 Trpm8 (ENSDORG00000001000) #15 Spp2 (ENSDORG00000025268) #16 Arl4c (ENSDORG00000028955) #19 Sh3bp4 (ENSDORG00000008492) #20 ENSDORG00000028590 #22 ENSDORG00000005374 #22 Gbx2 (ENSDORG00000026040) #23 Iqca (ENSDORG00000014321) #25 Ackr3 (ENSDORG00000007573) #26 ENSDORG00000013459 #27 Col6a3 (ENSDORG00000016705) #29 Mlph (ENSDORG00000011783) #30 Prlh (ENSDORG00000015671) #31 Rab17 (ENSDORG00000028745) #32 ENSDORG00000013588 #33 Ramp1 (ENSDORG00000024593) Ube2f (ENSDORG00000009774) #36 Scly (ENSDORG00000013372) Espnl (ENSDORG00000013375) Klhl30 (ENSDORG00000013380) Ilkap (ENSDORG00000008921) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b.x.a #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Marmotini ANCESTRAL SPECIES 2 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b.x.a #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Marmotini_b ANCESTRAL SPECIES 41 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b.x.a #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.bb #36 ENSGT00940000157773 ENSGT00940000156970 Arctic ground squirrel MODERN SPECIES 164 UGT1A1 (ENSUPAG00010020723) #11 ENSUPAG00010020741 #10 MROH2A (ENSUPAG00010020747) #12 ENSUPAG00010020787 #14 ENSUPAG00010020812 #15 ENSUPAG00010020817 #15 SPP2 (ENSUPAG00010020834) #16 ARL4C (ENSUPAG00010020852) #19 SH3BP4 (ENSUPAG00010020855) #20 ENSUPAG00010020859 AGAP1 (ENSUPAG00010020866) #22 GBX2 (ENSUPAG00010020920) #23 ASB18 (ENSUPAG00010020926) #24 IQCA1 (ENSUPAG00010020947) #25 ACKR3 (ENSUPAG00010020966) #26 COPS8 (ENSUPAG00010020976) #27 COL6A3 (ENSUPAG00010020987) #29 MLPH (ENSUPAG00010021088) #30 PRLH (ENSUPAG00010021113) #31 RAB17 (ENSUPAG00010021120) #32 LRRFIP1 (ENSUPAG00010021139) #33 RBM44 (ENSUPAG00010021290) #34 RAMP1 (ENSUPAG00010021322) UBE2F (ENSUPAG00010021329) #36 SCLY (ENSUPAG00010021351) ESPNL (ENSUPAG00010021353) Squirrel MODERN SPECIES 125 NEU2 (ENSSTOG00000028510) INPP5D (ENSSTOG00000011273) ATG16L1 (ENSSTOG00000027288) SAG (ENSSTOG00000011295) DGKD (ENSSTOG00000011312) USP40 (ENSSTOG00000011333) ENSSTOG00000020425 #10 ENSSTOG00000031804 ENSSTOG00000031047 MROH2A (ENSSTOG00000004577) #12 ENSSTOG00000033781 TRPM8 (ENSSTOG00000014749) #15 SPP2 (ENSSTOG00000023763) #16 ARL4C (ENSSTOG00000023217) #19 SH3BP4 (ENSSTOG00000016367) #20 AGAP1 (ENSSTOG00000005826) #22 GBX2 (ENSSTOG00000010654) #23 ASB18 (ENSSTOG00000022409) #24 IQCA1 (ENSSTOG00000010661) #25 ENSSTOG00000023053 #26 COPS8 (ENSSTOG00000022662) #27 COL6A3 (ENSSTOG00000002685) #29 MLPH (ENSSTOG00000019648) #30 PRLH (ENSSTOG00000024225) #31 RAB17 (ENSSTOG00000019957) #32 LRRFIP1 (ENSSTOG00000028433) #33 RBM44 (ENSSTOG00000008768) #34 RAMP1 (ENSSTOG00000029736) ENSSTOG00000014039 #36 SCLY (ENSSTOG00000014054) ESPNL (ENSSTOG00000022149) Alpin marmot MODERN SPECIES 8 NGEF (ENSMMMG00000002453) NEU2 (ENSMMMG00000002492) INPP5D (ENSMMMG00000002532) ATG16L1 (ENSMMMG00000002802) SAG (ENSMMMG00000003012) DGKD (ENSMMMG00000003046) USP40 (ENSMMMG00000003147) UGT1A6 (ENSMMMG00000003279) ENSMMMG00000003353 #10 MROH2A (ENSMMMG00000003365) #12 ENSMMMG00000003423 #14 TRPM8 (ENSMMMG00000003533) #15 SPP2 (ENSMMMG00000003655) #16 ARL4C (ENSMMMG00000003661) #19 SH3BP4 (ENSMMMG00000003701) #20 AGAP1 (ENSMMMG00000003728) #22 GBX2 (ENSMMMG00000003792) #23 ENSMMMG00000003806 #24 IQCA1 (ENSMMMG00000003823) #25 ENSMMMG00000003861 ENSMMMG00000003879 #26 COPS8 (ENSMMMG00000003891) #27 COL6A3 (ENSMMMG00000003940) #29 ENSMMMG00000004550 #30 PRLH (ENSMMMG00000004553) #31 RAB17 (ENSMMMG00000004563) #32 ENSMMMG00000004610 #33 RBM44 (ENSMMMG00000004797) #34 RAMP1 (ENSMMMG00000004869) UBE2F (ENSMMMG00000004879) #36 SCLY (ENSMMMG00000004889) Eurasian red squirrel MODERN SPECIES 12 NEU2 (ENSSVLG00005017599) INPP5D (ENSSVLG00005017670) ATG16L1 (ENSSVLG00005018238) SAG (ENSSVLG00005018394) DGKD (ENSSVLG00005018560) USP40 (ENSSVLG00005018876) UGT1A1 (ENSSVLG00005019841) #11 ENSSVLG00005020320 #10 MROH2A (ENSSVLG00005020369) #12 ENSSVLG00005020986 #14 TRPM8 (ENSSVLG00005021126) #15 ENSSVLG00005021538 #16 ARL4C (ENSSVLG00005021610) #19 SH3BP4 (ENSSVLG00005021655) #20 ENSSVLG00005021682 AGAP1 (ENSSVLG00005021722) #22 GBX2 (ENSSVLG00005021888) #23 ASB18 (ENSSVLG00005021908) #24 IQCA1 (ENSSVLG00005022036) #25 ENSSVLG00005022369 #26 COPS8 (ENSSVLG00005022383) #27 COL6A3 (ENSSVLG00005022505) #29 ENSSVLG00005022994 #30 ENSSVLG00005023016 #30 PRLH (ENSSVLG00005023077) #31 ENSSVLG00005023144 ENSSVLG00005023170 ENSSVLG00005023224 #33 RBM44 (ENSSVLG00005023463) #34 RAMP1 (ENSSVLG00005023605) ENSSVLG00005023661 #36 Hystricomorpha ANCESTRAL SPECIES 28 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.y #36 ENSGT00940000157773 ENSGT00940000156970 Hystricomorpha_a ANCESTRAL SPECIES 32 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00900000143236 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.y #36 ENSGT00940000157773 Hystricomorpha_b ANCESTRAL SPECIES 28 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00900000143236 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.y #36 ENSGT00940000157773 ENSGT00940000156970 Long-tailed chinchilla MODERN SPECIES 160 NEU2 (ENSCLAG00000012674) INPP5D (ENSCLAG00000015629) ATG16L1 (ENSCLAG00000010328) SAG (ENSCLAG00000009439) DGKD (ENSCLAG00000011641) USP40 (ENSCLAG00000008763) ENSCLAG00000011557 ENSCLAG00000014326 ENSCLAG00000011830 MROH2A (ENSCLAG00000016264) #12 HJURP (ENSCLAG00000012207) #14 TRPM8 (ENSCLAG00000013665) #15 SPP2 (ENSCLAG00000016002) #16 ARL4C (ENSCLAG00000010525) #19 SH3BP4 (ENSCLAG00000009544) #20 AGAP1 (ENSCLAG00000015901) #22 GBX2 (ENSCLAG00000008221) #23 ENSCLAG00000007670 #24 IQCA1 (ENSCLAG00000008889) #25 ACKR3 (ENSCLAG00000008658) #26 Degu MODERN SPECIES 130 NEU2 (ENSODEG00000008947) INPP5D (ENSODEG00000008216) ENSODEG00000019603 ATG16L1 (ENSODEG00000008154) SAG (ENSODEG00000008121) DGKD (ENSODEG00000008384) ENSODEG00000019500 ENSODEG00000007995 ENSODEG00000008578 UGT1A6 (ENSODEG00000009095) MROH2A (ENSODEG00000008630) #12 TRPM8 (ENSODEG00000012967) #15 SPP2 (ENSODEG00000008199) #16 ARL4C (ENSODEG00000019668) #19 SH3BP4 (ENSODEG00000008911) #20 AGAP1 (ENSODEG00000009204) #22 GBX2 (ENSODEG00000008224) #23 ASB18 (ENSODEG00000008270) #24 IQCA1 (ENSODEG00000009201) #25 ACKR3 (ENSODEG00000019748) #26 COPS8 (ENSODEG00000008319) #27 COL6A3 (ENSODEG00000008236) #29 ENSODEG00000009039 MLPH (ENSODEG00000009468) #30 PRLH (ENSODEG00000010289) #31 ENSODEG00000010103 #33 ENSODEG00000011179 #33 RBM44 (ENSODEG00000011354) #34 ENSODEG00000009348 ENSODEG00000008602 #36 SCLY (ENSODEG00000009146) Guinea pig MODERN SPECIES 13 NGEF (ENSCPOG00000013080) NEU2 (ENSCPOG00000009389) INPP5D (ENSCPOG00000011364) ATG16L1 (ENSCPOG00000011372) SAG (ENSCPOG00000013680) DGKD (ENSCPOG00000009544) USP40 (ENSCPOG00000003324) ENSCPOG00000035407 UGT1A6 (ENSCPOG00000038016) MROH2A (ENSCPOG00000006472) #12 ENSCPOG00000004994 #14 Trpm8 (ENSCPOG00000005510) #15 SPP2 (ENSCPOG00000014773) #16 ENSCPOG00000038150 #19 SH3BP4 (ENSCPOG00000023889) #20 AGAP1 (ENSCPOG00000021863) #22 GBX2 (ENSCPOG00000020471) #23 ASB18 (ENSCPOG00000008264) #24 IQCA1 (ENSCPOG00000015228) #25 ACKR3 (ENSCPOG00000014142) #26 COPS8 (ENSCPOG00000031921) #27 COL6A3 (ENSCPOG00000011331) #29 ENSCPOG00000031355 MLPH (ENSCPOG00000026459) #30 PRLH (ENSCPOG00000020075) #31 ENSCPOG00000032081 RAB17 (ENSCPOG00000015131) #32 LRRFIP1 (ENSCPOG00000006777) #33 RBM44 (ENSCPOG00000023598) #34 RAMP1 (ENSCPOG00000026974) UBE2F (ENSCPOG00000006368) #36 Naked mole-rat female MODERN SPECIES 17 ATG16L1 (ENSHGLG00000019537) SAG (ENSHGLG00000007228) USP40 (ENSHGLG00000009619) ENSHGLG00000047617 ENSHGLG00000047348 ENSHGLG00000047101 ENSHGLG00000039591 ENSHGLG00000002754 ENSHGLG00000003078 #14 ENSHGLG00000050789 #14 TRPM8 (ENSHGLG00000003296) #15 SPP2 (ENSHGLG00000003921) #16 ARL4C (ENSHGLG00000020294) #19 ENSHGLG00000049334 SH3BP4 (ENSHGLG00000019412) #20 AGAP1 (ENSHGLG00000019295) #22 GBX2 (ENSHGLG00000018155) #23 ASB18 (ENSHGLG00000018519) #24 IQCA1 (ENSHGLG00000018573) #25 ACKR3 (ENSHGLG00000008401) #26 COPS8 (ENSHGLG00000008745) #27 COL6A3 (ENSHGLG00000012006) #29 MLPH (ENSHGLG00000002426) #30 PRLH (ENSHGLG00000002592) #31 ENSHGLG00000003183 #33 RBM44 (ENSHGLG00000004621) #34 ENSHGLG00000043226 ENSHGLG00000044706 ENSHGLG00000047734 ENSHGLG00000006249 #36 SCLY (ENSHGLG00000006999) Lagomorpha ANCESTRAL SPECIES ENSGT00940000154793.C.ab #22 Pika MODERN SPECIES 2502 ENSOPRG00000003440 #22 Rabbit MODERN SPECIES 680 AGAP1 (ENSOCUG00000012670) #22 Tree shrew MODERN SPECIES 2822 AGAP1 (ENSTBEG00000015873) #22 Primates ANCESTRAL SPECIES 13 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Lemuriformes_a ANCESTRAL SPECIES 80 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Coquerels sifaka MODERN SPECIES 419 UGT1A1 (ENSPCOG00000021463) #11 MROH2A (ENSPCOG00000017544) #12 HJURP (ENSPCOG00000025953) #14 TRPM8 (ENSPCOG00000022642) #15 SPP2 (ENSPCOG00000007506) #16 ARL4C (ENSPCOG00000028187) #19 SH3BP4 (ENSPCOG00000001218) #20 AGAP1 (ENSPCOG00000018131) #22 GBX2 (ENSPCOG00000018530) #23 ASB18 (ENSPCOG00000021286) #24 IQCA1 (ENSPCOG00000014907) #25 ACKR3 (ENSPCOG00000003989) #26 COPS8 (ENSPCOG00000027995) #27 COL6A3 (ENSPCOG00000028385) #29 MLPH (ENSPCOG00000028337) #30 PRLH (ENSPCOG00000022175) #31 RAB17 (ENSPCOG00000016444) #32 LRRFIP1 (ENSPCOG00000024174) #33 RBM44 (ENSPCOG00000020553) #34 RAMP1 (ENSPCOG00000004479) ENSPCOG00000004278 #36 SCLY (ENSPCOG00000028757) ESPNL (ENSPCOG00000026475) Greater bamboo lemur MODERN SPECIES 196 ARL4C (ENSPSMG00000015570) #19 SH3BP4 (ENSPSMG00000015563) #20 AGAP1 (ENSPSMG00000015260) #22 GBX2 (ENSPSMG00000014982) #23 ASB18 (ENSPSMG00000014970) #24 IQCA1 (ENSPSMG00000014961) #25 ACKR3 (ENSPSMG00000014942) #26 COPS8 (ENSPSMG00000014918) #27 COL6A3 (ENSPSMG00000014666) #29 MLPH (ENSPSMG00000014212) #30 PRLH (ENSPSMG00000014161) #31 RAB17 (ENSPSMG00000014157) #32 Mouse lemur MODERN SPECIES 30 NEU2 (ENSMICG00000037724) INPP5D (ENSMICG00000006753) ATG16L1 (ENSMICG00000010261) SAG (ENSMICG00000010273) DGKD (ENSMICG00000010285) ENSMICG00000045220 ENSMICG00000045171 ENSMICG00000042700 #10 MROH2A (ENSMICG00000014627) #12 HJURP (ENSMICG00000014679) #14 TRPM8 (ENSMICG00000014693) #15 SPP2 (ENSMICG00000028114) #16 ARL4C (ENSMICG00000017503) #19 ENSMICG00000034713 SH3BP4 (ENSMICG00000004598) #20 AGAP1 (ENSMICG00000008660) #22 GBX2 (ENSMICG00000028176) #23 ASB18 (ENSMICG00000042020) #24 IQCA1 (ENSMICG00000008062) #25 ACKR3 (ENSMICG00000008095) #26 ENSMICG00000000206 #27 ENSMICG00000047235 #29 ENSMICG00000017470 RTP5 (ENSMICG00000045438) PDCD1 (ENSMICG00000032951) NEU4 (ENSMICG00000034826) GAL3ST2 (ENSMICG00000016500) D2HGDH (ENSMICG00000016497) ING5 (ENSMICG00000028191) DTYMK (ENSMICG00000013135) ENSMICG00000042660 Bushbaby MODERN SPECIES 248 AGAP1 (ENSOGAG00000005907) #22 GBX2 (ENSOGAG00000034320) #23 ASB18 (ENSOGAG00000027887) #24 IQCA1 (ENSOGAG00000005917) #25 ACKR3 (ENSOGAG00000027445) #26 COPS8 (ENSOGAG00000007872) #27 COL6A3 (ENSOGAG00000016050) #29 ENSOGAG00000032294 MLPH (ENSOGAG00000015356) #30 PRLH (ENSOGAG00000034435) #31 RAB17 (ENSOGAG00000012997) #32 LRRFIP1 (ENSOGAG00000013001) #33 RBM44 (ENSOGAG00000004247) #34 ENSOGAG00000004248 UBE2F (ENSOGAG00000005308) #36 SCLY (ENSOGAG00000009623) Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Tarsier MODERN SPECIES 3662 AGAP1 (ENSTSYG00000006629) #22 ASB18 (ENSTSYG00000027790) #24 IQCA1 (ENSTSYG00000004713) #25 Simiiformes ANCESTRAL SPECIES 15 ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Hominoidea DUPLICATION Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000159041 ENSGT00940000157267.k ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000157267.l ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab.m #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.o #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Hominidae ANCESTRAL SPECIES 17 ENSGT00940000159041 ENSGT00940000157267.k ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000157267.l ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab.m #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.o #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00940000157267.k ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162757.c #10 ENSGT00940000157267.l ENSGT00940000162757.d #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab.m #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.o #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267.k ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162757.d #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab.m #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.o #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Pan ANCESTRAL SPECIES 12 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267.k ENSGT00940000162757.d #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab.m #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.o #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a #36 ENSGT00940000157773 ENSGT00940000156970 Chimpanzee MODERN SPECIES 15 INPP5D (ENSPTRG00000013050) ATG16L1 (ENSPTRG00000013051) SAG (ENSPTRG00000013052) DGKD (ENSPTRG00000013053) USP40 (ENSPTRG00000013054) UGT1A3 (ENSPTRG00000013058) ENSPTRG00000047621 #10 ENSPTRG00000044952 #10 MROH2A (ENSPTRG00000048059) #12 HJURP (ENSPTRG00000013062) #14 ENSPTRG00000048514 TRPM8 (ENSPTRG00000013063) #15 SPP2 (ENSPTRG00000013064) #16 ARL4C (ENSPTRG00000013065) #19 SH3BP4 (ENSPTRG00000013066) #20 AGAP1 (ENSPTRG00000013067) #22 GBX2 (ENSPTRG00000013068) #23 ASB18 (ENSPTRG00000013069) #24 IQCA1 (ENSPTRG00000013070) #25 ACKR3 (ENSPTRG00000013071) #26 COPS8 (ENSPTRG00000049076) #27 COL6A3 (ENSPTRG00000013074) #29 MLPH (ENSPTRG00000013075) #30 PRLH (ENSPTRG00000045686) #31 RAB17 (ENSPTRG00000013076) #32 LRRFIP1 (ENSPTRG00000013077) #33 RBM44 (ENSPTRG00000013078) #34 RAMP1 (ENSPTRG00000013080) UBE2F (ENSPTRG00000013081) #36 SCLY (ENSPTRG00000013082) ESPNL (ENSPTRG00000048030) Bonobo MODERN SPECIES 15 NEU2 (ENSPPAG00000037902) INPP5D (ENSPPAG00000030895) ATG16L1 (ENSPPAG00000037037) SAG (ENSPPAG00000016519) DGKD (ENSPPAG00000044113) USP40 (ENSPPAG00000044110) UGT1A3 (ENSPPAG00000044118) ENSPPAG00000044111 #12 HJURP (ENSPPAG00000037468) #14 ENSPPAG00000036893 TRPM8 (ENSPPAG00000038881) #15 SPP2 (ENSPPAG00000030789) #16 ARL4C (ENSPPAG00000002191) #19 SH3BP4 (ENSPPAG00000043782) #20 ENSPPAG00000021065 AGAP1 (ENSPPAG00000036184) #22 IQCA1 (ENSPPAG00000029032) #25 ACKR3 (ENSPPAG00000013418) #26 COPS8 (ENSPPAG00000028390) #27 ENSPPAG00000038270 #29 MLPH (ENSPPAG00000042394) #30 PRLH (ENSPPAG00000041641) #31 RAB17 (ENSPPAG00000041650) #32 ENSPPAG00000027436 #33 ENSPPAG00000035768 RAMP1 (ENSPPAG00000035665) UBE2F (ENSPPAG00000041279) #36 SCLY (ENSPPAG00000035663) ESPNL (ENSPPAG00000036961) ENSPPAG00000018534 KLHL30 (ENSPPAG00000042532) Human MODERN SPECIES 11 UGT1A8 (ENSG00000242366) UGT1A10 (ENSG00000242515) UGT1A9 (ENSG00000241119) UGT1A7 (ENSG00000244122) UGT1A6 (ENSG00000167165) UGT1A5 (ENSG00000288705) UGT1A4 (ENSG00000244474) UGT1A3 (ENSG00000288702) UGT1A1 (ENSG00000241635) #11 MROH2A (ENSG00000185038) #12 HJURP (ENSG00000123485) #14 TRPM8 (ENSG00000144481) #15 SPP2 (ENSG00000072080) #16 ARL4C (ENSG00000188042) #19 SH3BP4 (ENSG00000130147) #20 AGAP1 (ENSG00000157985) #22 GBX2 (ENSG00000168505) #23 ASB18 (ENSG00000182177) #24 IQCA1 (ENSG00000132321) #25 ACKR3 (ENSG00000144476) #26 COPS8 (ENSG00000198612) #27 COL6A3 (ENSG00000163359) #29 MLPH (ENSG00000115648) #30 PRLH (ENSG00000071677) #31 RAB17 (ENSG00000124839) #32 LRRFIP1 (ENSG00000124831) #33 RBM44 (ENSG00000177483) #34 RAMP1 (ENSG00000132329) UBE2F (ENSG00000184182) #36 SCLY (ENSG00000132330) ESPNL (ENSG00000144488) Gorilla MODERN SPECIES 15 INPP5D (ENSGGOG00000000530) ATG16L1 (ENSGGOG00000016433) SAG (ENSGGOG00000011713) ENSGGOG00000011507 DGKD (ENSGGOG00000000308) USP40 (ENSGGOG00000034943) ENSGGOG00000043725 UGT1A5 (ENSGGOG00000002604) ENSGGOG00000043380 #10 MROH2A (ENSGGOG00000002606) #12 HJURP (ENSGGOG00000002621) #14 TRPM8 (ENSGGOG00000008375) #15 SPP2 (ENSGGOG00000006676) #16 ARL4C (ENSGGOG00000023462) #19 SH3BP4 (ENSGGOG00000013506) #20 ENSGGOG00000005512 #22 ENSGGOG00000036386 GBX2 (ENSGGOG00000005520) #23 ASB18 (ENSGGOG00000005521) #24 IQCA1 (ENSGGOG00000013083) #25 ACKR3 (ENSGGOG00000004275) #26 COPS8 (ENSGGOG00000036194) #27 COL6A3 (ENSGGOG00000002468) #29 MLPH (ENSGGOG00000015075) #30 PRLH (ENSGGOG00000015080) #31 RAB17 (ENSGGOG00000015083) #32 LRRFIP1 (ENSGGOG00000008411) #33 RBM44 (ENSGGOG00000012246) #34 RAMP1 (ENSGGOG00000003956) UBE2F (ENSGGOG00000010709) #36 SCLY (ENSGGOG00000000090) Orangutan MODERN SPECIES 15 INPP5D (ENSPPYG00000013288) ATG16L1 (ENSPPYG00000013289) SAG (ENSPPYG00000013290) DGKD (ENSPPYG00000013291) USP40 (ENSPPYG00000013292) UGT1A3 (ENSPPYG00000013293) ENSPPYG00000037449 #10 MROH2A (ENSPPYG00000013295) #12 HJURP (ENSPPYG00000013296) #14 ENSPPYG00000037075 TRPM8 (ENSPPYG00000013297) #15 SPP2 (ENSPPYG00000013298) #16 ARL4C (ENSPPYG00000036860) #19 SH3BP4 (ENSPPYG00000013300) #20 ENSPPYG00000041671 ENSPPYG00000013301 #22 GBX2 (ENSPPYG00000037858) #23 ASB18 (ENSPPYG00000035182) #24 IQCA1 (ENSPPYG00000013305) #25 ACKR3 (ENSPPYG00000013307) #26 COPS8 (ENSPPYG00000013308) #27 COL6A3 (ENSPPYG00000013309) #29 MLPH (ENSPPYG00000013310) #30 PRLH (ENSPPYG00000013311) #31 RAB17 (ENSPPYG00000013312) #32 ENSPPYG00000013313 #33 RBM44 (ENSPPYG00000031452) #34 RAMP1 (ENSPPYG00000030772) UBE2F (ENSPPYG00000013315) #36 SCLY (ENSPPYG00000013316) ESPNL (ENSPPYG00000013317) Gibbon MODERN SPECIES 14 NGEF (ENSNLEG00000014408) NEU2 (ENSNLEG00000014420) INPP5D (ENSNLEG00000008201) ATG16L1 (ENSNLEG00000008221) SAG (ENSNLEG00000008337) DGKD (ENSNLEG00000008355) ENSNLEG00000008375 UGT1A4 (ENSNLEG00000008395) ENSNLEG00000033601 #10 ENSNLEG00000008474 HJURP (ENSNLEG00000008476) #14 ENSNLEG00000008495 TRPM8 (ENSNLEG00000008497) #15 SPP2 (ENSNLEG00000008531) #16 SH3BP4 (ENSNLEG00000008547) #20 ENSNLEG00000010626 #22 GBX2 (ENSNLEG00000010647) #23 ASB18 (ENSNLEG00000010665) #24 IQCA1 (ENSNLEG00000010671) #25 ACKR3 (ENSNLEG00000010701) #26 ENSNLEG00000010706 #27 COL6A3 (ENSNLEG00000010790) #29 MLPH (ENSNLEG00000011006) #30 PRLH (ENSNLEG00000011050) #31 RAB17 (ENSNLEG00000011056) #32 ENSNLEG00000004742 ENSNLEG00000011097 #33 RBM44 (ENSNLEG00000011111) #34 RAMP1 (ENSNLEG00000011146) UBE2F (ENSNLEG00000011152) #36 SCLY (ENSNLEG00000011190) Hominoidea ANCESTRAL SPECIES 7 ENSGT00390000003140.A ENSGT00940000160314 ENSGT00940000160138 ENSGT00910000146979 ENSGT00940000157702 ENSGT00390000009002 ENSGT00390000011962 ENSGT00940000154079.a ENSGT00940000155091 ENSGT00950000182951.B ENSGT00950000182888.a.a.b ENSGT00940000153838.b ENSGT00950000183081.a.a.a ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000154793.C.ab.n #22 ENSGT00940000159902 ENSGT00940000159228 ENSGT00390000012166.o ENSGT00430000032886 ENSGT00390000012166.p ENSGT00940000155130 ENSGT00940000159504 ENSGT00940000157906 ENSGT00940000157458 ENSGT00950000182869.e.a.b.sb.b.a.b.a ENSGT00500000044895 ENSGT00390000013003 ENSGT00940000157639 ENSGT01100000263517.b.d.m.b.b ENSGT00900000141021.a Hominidae ANCESTRAL SPECIES 6 ENSGT00390000003140.A ENSGT00940000160314 ENSGT00940000160138 ENSGT00910000146979 ENSGT00940000157702 ENSGT00390000009002 ENSGT00390000011962 ENSGT00940000154079.a ENSGT00940000155091 ENSGT00950000182951.B ENSGT00950000182888.a.a.b ENSGT00940000153838.b ENSGT00950000183081.a.a.a ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000154793.C.ab.n #22 ENSGT00940000159902 ENSGT00940000159228 ENSGT00390000012166.o ENSGT00390000012166.p ENSGT00940000155130 ENSGT00940000159504 ENSGT00940000157906 ENSGT00940000157458 ENSGT00950000182869.e.a.b.sb.b.a.b.a ENSGT00500000044895 ENSGT00390000013003 ENSGT00940000157639 ENSGT01100000263517.b.d.m.b.b ENSGT00900000141021.a ENSGT00940000155601 Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00390000003140.A ENSGT00940000160314 ENSGT00940000160138 ENSGT00910000146979 ENSGT00940000157702 ENSGT00390000009002 ENSGT00390000011962 ENSGT00940000154079.a ENSGT00940000155091 ENSGT00950000182951.B ENSGT00950000182888.a.a.b ENSGT00940000153838.b ENSGT00950000183081.a.a.a ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000154793.C.ab.n #22 ENSGT00940000159902 ENSGT00940000159228 ENSGT00390000012166.o ENSGT00390000012166.p ENSGT00940000155130 ENSGT00940000159504 ENSGT00940000157906 ENSGT00940000157458 ENSGT00950000182869.e.a.b.sb.b.a.b.a ENSGT00500000044895 ENSGT00390000013003 ENSGT00940000157639 ENSGT01100000263517.b.d.m.b.b ENSGT00900000141021.a ENSGT00940000155601 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00390000003140.A ENSGT00940000160314 ENSGT00940000160138 ENSGT00910000146979 ENSGT00940000157702 ENSGT00390000009002 ENSGT00390000011962 ENSGT00940000154079.a ENSGT00940000155091 ENSGT00950000182951.B ENSGT00950000182888.a.a.b ENSGT00940000153838.b ENSGT00950000183081.a.a.a ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000154793.C.ab.n #22 ENSGT00940000159902 ENSGT00940000159228 ENSGT00390000012166.o ENSGT00390000012166.p ENSGT00940000155130 ENSGT00940000159504 ENSGT00940000157906 ENSGT00940000157458 ENSGT00950000182869.e.a.b.sb.b.a.b.a ENSGT00500000044895 ENSGT00390000013003 ENSGT00940000157639 ENSGT01100000263517.b.d.m.b.b ENSGT00900000141021.a ENSGT00940000155601 Pan ANCESTRAL SPECIES ENSGT00390000003140.A ENSGT00940000160314 ENSGT00940000160138 ENSGT00910000146979 ENSGT00940000157702 ENSGT00390000009002 ENSGT00390000011962 ENSGT00940000154079.a ENSGT00940000155091 ENSGT00950000182951.B ENSGT00950000182888.a.a.b ENSGT00940000153838.b ENSGT00950000183081.a.a.a ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000154793.C.ab.n #22 ENSGT00940000159902 ENSGT00940000159228 ENSGT00390000012166.o ENSGT00390000012166.p ENSGT00940000155130 ENSGT00940000159504 ENSGT00940000157906 ENSGT00940000157458 ENSGT00950000182869.e.a.b.sb.b.a.b.a ENSGT00500000044895 ENSGT00390000013003 ENSGT00990000205747 ENSGT00940000157639 ENSGT01100000263517.b.d.m.b.b ENSGT00900000141021.a Chimpanzee MODERN SPECIES ASTN1 (ENSPTRG00000023115) BRINP2 (ENSPTRG00000024127) SEC16B (ENSPTRG00000042690) RASAL2 (ENSPTRG00000001717) ENSPTRG00000052709 CLEC20A (ENSPTRG00000050785) TEX35 (ENSPTRG00000001720) RALGPS2 (ENSPTRG00000001722) ANGPTL1 (ENSPTRG00000001724) FAM20B (ENSPTRG00000001725) TOR3A (ENSPTRG00000001726) ABL2 (ENSPTRG00000001727) SOAT1 (ENSPTRG00000001728) AXDND1 (ENSPTRG00000001729) NPHS2 (ENSPTRG00000001731) ENSPTRG00000043051 #22 TDRD5 (ENSPTRG00000001732) ENSPTRG00000049859 FAM163A (ENSPTRG00000041446) TOR1AIP2 (ENSPTRG00000001734) TOR1AIP1 (ENSPTRG00000001736) CEP350 (ENSPTRG00000001738) QSOX1 (ENSPTRG00000001739) LHX4 (ENSPTRG00000001740) ACBD6 (ENSPTRG00000001741) ENSPTRG00000051293 XPR1 (ENSPTRG00000001743) KIAA1614 (ENSPTRG00000001744) ENSPTRG00000048595 STX6 (ENSPTRG00000033764) MR1 (ENSPTRG00000001746) Bonobo MODERN SPECIES PAPPA2 (ENSPPAG00000036025) ASTN1 (ENSPPAG00000036233) BRINP2 (ENSPPAG00000043526) SEC16B (ENSPPAG00000042449) RASAL2 (ENSPPAG00000043110) ENSPPAG00000011200 TEX35 (ENSPPAG00000033252) RALGPS2 (ENSPPAG00000027492) ANGPTL1 (ENSPPAG00000029915) FAM20B (ENSPPAG00000041041) TOR3A (ENSPPAG00000035693) ABL2 (ENSPPAG00000043803) SOAT1 (ENSPPAG00000038722) AXDND1 (ENSPPAG00000029513) NPHS2 (ENSPPAG00000029304) ENSPPAG00000028865 #22 TDRD5 (ENSPPAG00000034442) FAM163A (ENSPPAG00000035329) TOR1AIP2 (ENSPPAG00000039236) TOR1AIP1 (ENSPPAG00000027535) CEP350 (ENSPPAG00000035440) QSOX1 (ENSPPAG00000030296) ENSPPAG00000034618 LHX4 (ENSPPAG00000043845) ACBD6 (ENSPPAG00000043016) ENSPPAG00000036003 XPR1 (ENSPPAG00000023632) KIAA1614 (ENSPPAG00000041204) ENSPPAG00000029107 STX6 (ENSPPAG00000042678) MR1 (ENSPPAG00000019815) Gibbon MODERN SPECIES 2 ASTN1 (ENSNLEG00000015484) BRINP2 (ENSNLEG00000015495) SEC16B (ENSNLEG00000015508) ENSNLEG00000034595 RASAL2 (ENSNLEG00000015510) CLEC20A (ENSNLEG00000033644) TEX35 (ENSNLEG00000015529) ANGPTL1 (ENSNLEG00000015564) RALGPS2 (ENSNLEG00000015544) FAM20B (ENSNLEG00000029048) TOR3A (ENSNLEG00000015587) ABL2 (ENSNLEG00000015604) SOAT1 (ENSNLEG00000015623) AXDND1 (ENSNLEG00000015679) NPHS2 (ENSNLEG00000015739) ENSNLEG00000015748 #22 TDRD5 (ENSNLEG00000015751) FAM163A (ENSNLEG00000015804) TOR1AIP2 (ENSNLEG00000015815) ENSNLEG00000029703 TOR1AIP1 (ENSNLEG00000015827) CEP350 (ENSNLEG00000015851) QSOX1 (ENSNLEG00000015908) ENSNLEG00000015953 ENSNLEG00000027446 ACBD6 (ENSNLEG00000015957) XPR1 (ENSNLEG00000015979) ENSNLEG00000016007 STX6 (ENSNLEG00000016021) ENSNLEG00000016013 BTF3L4 (ENSNLEG00000016041) Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000162757.e.b.b #10 ENSGT00940000162976 ENSGT00940000162757.e.a #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 ENSGT00940000156970 Rhinopithecus ANCESTRAL SPECIES 45 ENSGT00940000162757.e.b.b #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.d #36 ENSGT00940000157773 ENSGT00940000156970 Golden snub-nosed monkey MODERN SPECIES 1152 SPP2 (ENSRROG00000028127) #16 ARL4C (ENSRROG00000029871) #19 SH3BP4 (ENSRROG00000031461) #20 ENSRROG00000034551 AGAP1 (ENSRROG00000036190) #22 GBX2 (ENSRROG00000035138) #23 ASB18 (ENSRROG00000011244) #24 IQCA1 (ENSRROG00000039851) #25 Black snub-nosed monkey MODERN SPECIES 1007 ENSRBIG00000027870 #10 ENSRBIG00000038698 #10 UGT1A5 (ENSRBIG00000044273) MROH2A (ENSRBIG00000041109) #12 HJURP (ENSRBIG00000037337) #14 ENSRBIG00000038620 TRPM8 (ENSRBIG00000038917) #15 SPP2 (ENSRBIG00000044900) #16 SH3BP4 (ENSRBIG00000042776) #20 ENSRBIG00000033516 AGAP1 (ENSRBIG00000029245) #22 GBX2 (ENSRBIG00000033693) #23 ASB18 (ENSRBIG00000025110) #24 IQCA1 (ENSRBIG00000030471) #25 ACKR3 (ENSRBIG00000029465) #26 COPS8 (ENSRBIG00000042564) #27 COL6A3 (ENSRBIG00000036666) #29 MLPH (ENSRBIG00000024938) #30 PRLH (ENSRBIG00000039354) #31 ENSRBIG00000029451 RAB17 (ENSRBIG00000024090) #32 ENSRBIG00000041081 #33 RBM44 (ENSRBIG00000027703) #34 RAMP1 (ENSRBIG00000027122) Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000162757.e.b.b #10 ENSGT00940000162976 ENSGT00940000162757.e.a #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 ENSGT00940000156970 Vervet Monkey MODERN SPECIES 1 INPP5D (ENSCSAG00000006368) ATG16L1 (ENSCSAG00000006363) SAG (ENSCSAG00000006351) DGKD (ENSCSAG00000006335) USP40 (ENSCSAG00000006323) ENSCSAG00000006311 UGT1A5 (ENSCSAG00000006310) ENSCSAG00000006305 #10 MROH2A (ENSCSAG00000006299) #12 HJURP (ENSCSAG00000006286) #14 ENSCSAG00000018793 TRPM8 (ENSCSAG00000006269) #15 SPP2 (ENSCSAG00000006237) #16 ARL4C (ENSCSAG00000018795) #19 SH3BP4 (ENSCSAG00000006235) #20 AGAP1 (ENSCSAG00000006230) #22 ENSCSAG00000006225 GBX2 (ENSCSAG00000006222) #23 ASB18 (ENSCSAG00000006216) #24 IQCA1 (ENSCSAG00000006204) #25 ACKR3 (ENSCSAG00000018797) #26 ENSCSAG00000006174 COL6A3 (ENSCSAG00000006162) #29 ENSCSAG00000018799 MLPH (ENSCSAG00000006137) #30 PRLH (ENSCSAG00000006132) #31 RAB17 (ENSCSAG00000006115) #32 LRRFIP1 (ENSCSAG00000006108) #33 RBM44 (ENSCSAG00000006098) #34 RAMP1 (ENSCSAG00000006090) SCLY (ENSCSAG00000006088) Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757.e.a #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00910000147210 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 Macaca ANCESTRAL SPECIES 15 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757.e.a #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00910000147210 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 Pig-tailed macaque MODERN SPECIES 525 NEU2 (ENSMNEG00000028399) INPP5D (ENSMNEG00000028451) ATG16L1 (ENSMNEG00000030017) SAG (ENSMNEG00000041266) DGKD (ENSMNEG00000044349) USP40 (ENSMNEG00000005725) ENSMNEG00000040610 #10 UGT1A1 (ENSMNEG00000029757) #11 MROH2A (ENSMNEG00000007484) #12 HJURP (ENSMNEG00000040615) #14 TRPM8 (ENSMNEG00000035109) #15 SPP2 (ENSMNEG00000034902) #16 ARL4C (ENSMNEG00000031224) #19 SH3BP4 (ENSMNEG00000039881) #20 ENSMNEG00000037145 AGAP1 (ENSMNEG00000028819) #22 GBX2 (ENSMNEG00000036580) #23 ENSMNEG00000044531 ASB18 (ENSMNEG00000029927) #24 IQCA1 (ENSMNEG00000039533) #25 ACKR3 (ENSMNEG00000008100) #26 COPS8 (ENSMNEG00000044205) #27 ENSMNEG00000019117 COL6A3 (ENSMNEG00000036597) #29 MLPH (ENSMNEG00000032948) #30 PRLH (ENSMNEG00000028766) #31 RAB17 (ENSMNEG00000030785) #32 ENSMNEG00000034659 #33 RBM44 (ENSMNEG00000042905) #34 RAMP1 (ENSMNEG00000045433) UBE2F (ENSMNEG00000034534) #36 Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000166673.d.a.a.a.a.b ENSGT00940000162757.f #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000161627.a.a.a.b.b.b.a.a.b.c.a.b ENSGT01080000257484.C ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.a.a.b.a.a.a.a ENSGT01100000263539.b.a.a.a.a.a.a.a.b.b.b.a.b.a.a.a ENSGT00940000154793.C.`b.a ##22 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00910000147210 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 Crab-eating macaque MODERN SPECIES 3 UGT1A8 (ENSMFAG00000042349) #11 ENSMFAG00000056186 ENSMFAG00000039060 #10 MROH2A (ENSMFAG00000045490) #12 HJURP (ENSMFAG00000000886) #14 ENSMFAG00000050196 TRPM8 (ENSMFAG00000043208) #15 SPP2 (ENSMFAG00000044433) #16 ENSMFAG00000062028 ENSMFAG00000049398 ENSMFAG00000045232 #19 SH3BP4 (ENSMFAG00000038422) #20 ENSMFAG00000062617 ENSMFAG00000056989 ENSMFAG00000050981 ##22 ENSMFAG00000038629 #22 GBX2 (ENSMFAG00000031863) #23 ASB18 (ENSMFAG00000042948) #24 IQCA1 (ENSMFAG00000046217) #25 ACKR3 (ENSMFAG00000029542) #26 COPS8 (ENSMFAG00000043944) #27 ENSMFAG00000030220 COL6A3 (ENSMFAG00000043048) #29 MLPH (ENSMFAG00000040090) #30 PRLH (ENSMFAG00000043339) #31 RAB17 (ENSMFAG00000036950) #32 ENSMFAG00000035972 #33 RBM44 (ENSMFAG00000002416) #34 RAMP1 (ENSMFAG00000032812) ENSMFAG00000035899 #36 SCLY (ENSMFAG00000040528) Rhesus MODERN SPECIES 3 DGKD (ENSMMUG00000005646) USP40 (ENSMMUG00000005650) UGT1A1 (ENSMMUG00000021216) #11 ENSMMUG00000064188 MROH2A (ENSMMUG00000021219) #12 HJURP (ENSMMUG00000021221) #14 ENSMMUG00000060899 TRPM8 (ENSMMUG00000046155) #15 SPP2 (ENSMMUG00000012173) #16 ENSMMUG00000056429 ENSMMUG00000054595 ARL4C (ENSMMUG00000011516) #19 SH3BP4 (ENSMMUG00000013808) #20 ENSMMUG00000064161 ENSMMUG00000050921 AGAP1 (ENSMMUG00000009346) #22 GBX2 (ENSMMUG00000005911) #23 IQCA1 (ENSMMUG00000017404) #25 ACKR3 (ENSMMUG00000060487) #26 COPS8 (ENSMMUG00000021605) #27 COL6A3 (ENSMMUG00000014049) #29 MLPH (ENSMMUG00000012089) #30 PRLH (ENSMMUG00000050714) #31 RAB17 (ENSMMUG00000012094) #32 LRRFIP1 (ENSMMUG00000003386) #33 RBM44 (ENSMMUG00000008908) #34 ENSMMUG00000063771 RAMP1 (ENSMMUG00000052071) UBE2F (ENSMMUG00000018482) #36 SCLY (ENSMMUG00000018483) ESPNL (ENSMMUG00000018486) Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000162757.e.b.b #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00910000147210 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 Olive baboon MODERN SPECIES 1 ATG16L1 (ENSPANG00000024161) SAG (ENSPANG00000008753) DGKD (ENSPANG00000017057) ENSPANG00000025666 ENSPANG00000040648 UGT1A4 (ENSPANG00000018059) ENSPANG00000032206 #10 ENSPANG00000030852 #10 MROH2A (ENSPANG00000018452) #12 HJURP (ENSPANG00000015124) #14 TRPM8 (ENSPANG00000024755) #15 SPP2 (ENSPANG00000019534) #16 ARL4C (ENSPANG00000047505) #19 SH3BP4 (ENSPANG00000005413) #20 ENSPANG00000047269 AGAP1 (ENSPANG00000011986) #22 GBX2 (ENSPANG00000017536) #23 ASB18 (ENSPANG00000005054) #24 IQCA1 (ENSPANG00000014732) #25 ACKR3 (ENSPANG00000007800) #26 COPS8 (ENSPANG00000011780) #27 COL6A3 (ENSPANG00000006369) #29 MLPH (ENSPANG00000018132) #30 PRLH (ENSPANG00000005973) #31 ENSPANG00000041795 RAB17 (ENSPANG00000037034) #32 ENSPANG00000017841 #33 RBM44 (ENSPANG00000010319) #34 RAMP1 (ENSPANG00000051374) UBE2F (ENSPANG00000005411) #36 SCLY (ENSPANG00000000673) Cercopithecinae_d ANCESTRAL SPECIES ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757.e.a #10 ENSGT00940000162757.e.b.b #10 ENSGT00940000159677.d #11 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00910000147209 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00910000147210 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 ENSGT00940000157773 Sooty mangabey MODERN SPECIES 107 ENSCATG00000042377 #10 ENSCATG00000042272 #10 UGT1A1 (ENSCATG00000000047) #11 MROH2A (ENSCATG00000029168) #12 HJURP (ENSCATG00000033953) #14 TRPM8 (ENSCATG00000032320) #15 SPP2 (ENSCATG00000024118) #16 ARL4C (ENSCATG00000041801) #19 SH3BP4 (ENSCATG00000036213) #20 ENSCATG00000035957 AGAP1 (ENSCATG00000029896) #22 GBX2 (ENSCATG00000034521) #23 ENSCATG00000040015 ASB18 (ENSCATG00000033942) #24 IQCA1 (ENSCATG00000008806) #25 ACKR3 (ENSCATG00000021636) #26 COPS8 (ENSCATG00000033600) #27 ENSCATG00000020622 COL6A3 (ENSCATG00000036982) #29 MLPH (ENSCATG00000044238) #30 PRLH (ENSCATG00000034916) #31 RAB17 (ENSCATG00000030578) #32 ENSCATG00000040003 #33 RBM44 (ENSCATG00000020323) #34 RAMP1 (ENSCATG00000038364) ENSCATG00000028463 #36 Drill MODERN SPECIES 784 ATG16L1 (ENSMLEG00000028574) SAG (ENSMLEG00000037213) DGKD (ENSMLEG00000043481) USP40 (ENSMLEG00000033899) UGT1A5 (ENSMLEG00000033333) ENSMLEG00000029773 #10 ENSMLEG00000038711 #10 MROH2A (ENSMLEG00000043616) #12 HJURP (ENSMLEG00000040399) #14 ENSMLEG00000036363 TRPM8 (ENSMLEG00000021173) #15 SPP2 (ENSMLEG00000037361) #16 ARL4C (ENSMLEG00000027620) #19 SH3BP4 (ENSMLEG00000037429) #20 ENSMLEG00000036559 AGAP1 (ENSMLEG00000034856) #22 ASB18 (ENSMLEG00000037239) #24 ENSMLEG00000036860 IQCA1 (ENSMLEG00000036394) #25 ACKR3 (ENSMLEG00000000234) #26 COPS8 (ENSMLEG00000036293) #27 ENSMLEG00000017370 COL6A3 (ENSMLEG00000030027) #29 MLPH (ENSMLEG00000034413) #30 PRLH (ENSMLEG00000040440) #31 RAB17 (ENSMLEG00000041001) #32 ENSMLEG00000038517 #33 RBM44 (ENSMLEG00000007850) #34 RAMP1 (ENSMLEG00000029626) ENSMLEG00000033263 #36 SCLY (ENSMLEG00000037681) Platyrrhini ANCESTRAL SPECIES 9 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a.d #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.b.a #36 ENSGT00940000157773 ENSGT00940000156970 Mas night monkey MODERN SPECIES 940 NGEF (ENSANAG00000024538) NEU2 (ENSANAG00000037129) INPP5D (ENSANAG00000036916) ATG16L1 (ENSANAG00000035256) SAG (ENSANAG00000026665) DGKD (ENSANAG00000033065) USP40 (ENSANAG00000036897) ENSANAG00000035564 HJURP (ENSANAG00000026897) #14 ENSANAG00000026908 TRPM8 (ENSANAG00000026214) #15 SPP2 (ENSANAG00000037484) #16 ARL4C (ENSANAG00000038361) #19 ENSANAG00000036206 #20 ENSANAG00000019899 AGAP1 (ENSANAG00000033262) #22 GBX2 (ENSANAG00000028606) #23 ASB18 (ENSANAG00000038140) #24 IQCA1 (ENSANAG00000014576) #25 ACKR3 (ENSANAG00000008341) #26 COPS8 (ENSANAG00000036385) #27 COL6A3 (ENSANAG00000020236) #29 MLPH (ENSANAG00000037808) #30 PRLH (ENSANAG00000030046) #31 ENSANAG00000037953 #32 ENSANAG00000021311 #33 RBM44 (ENSANAG00000037356) #34 RAMP1 (ENSANAG00000036130) Cebidae ANCESTRAL SPECIES 11 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a.d #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.b.a #36 ENSGT00940000157773 ENSGT00940000156970 Marmoset MODERN SPECIES 18 USP40 (ENSCJAG00000014074) UGT1A1 (ENSCJAG00000014130) #11 ENSCJAG00000075786 HJURP (ENSCJAG00000014161) #14 ENSCJAG00000063077 TRPM8 (ENSCJAG00000014167) #15 SPP2 (ENSCJAG00000071680) #16 ENSCJAG00000079474 ARL4C (ENSCJAG00000042179) #19 ENSCJAG00000072928 SH3BP4 (ENSCJAG00000014272) #20 ENSCJAG00000079787 ENSCJAG00000086812 ENSCJAG00000063144 ENSCJAG00000075736 AGAP1 (ENSCJAG00000004382) #22 GBX2 (ENSCJAG00000004419) #23 ASB18 (ENSCJAG00000004432) #24 IQCA1 (ENSCJAG00000004446) #25 ACKR3 (ENSCJAG00000022033) #26 COPS8 (ENSCJAG00000040503) #27 COL6A3 (ENSCJAG00000002226) #29 MLPH (ENSCJAG00000076633) #30 PRLH (ENSCJAG00000002208) #31 ENSCJAG00000076425 #32 ENSCJAG00000000491 #33 RBM44 (ENSCJAG00000000484) #34 RAMP1 (ENSCJAG00000086220) ENSCJAG00000000476 #36 SCLY (ENSCJAG00000000471) ESPNL (ENSCJAG00000077549) Cebidae_a ANCESTRAL SPECIES 16 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a.d #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.b.a.b #36 ENSGT00940000157773 ENSGT00940000156970 Bolivian squirrel monkey MODERN SPECIES 128 INPP5D (ENSSBOG00000028279) ATG16L1 (ENSSBOG00000024084) ENSSBOG00000021489 SAG (ENSSBOG00000030092) DGKD (ENSSBOG00000032101) USP40 (ENSSBOG00000034189) ENSSBOG00000030178 ENSSBOG00000031447 #10 MROH2A (ENSSBOG00000018561) #12 HJURP (ENSSBOG00000019880) #14 ENSSBOG00000025162 TRPM8 (ENSSBOG00000027957) #15 SPP2 (ENSSBOG00000032899) #16 ARL4C (ENSSBOG00000033162) #19 SH3BP4 (ENSSBOG00000034258) #20 AGAP1 (ENSSBOG00000033198) #22 ASB18 (ENSSBOG00000029537) #24 IQCA1 (ENSSBOG00000029838) #25 ACKR3 (ENSSBOG00000024133) #26 COPS8 (ENSSBOG00000031570) #27 COL6A3 (ENSSBOG00000029543) #29 MLPH (ENSSBOG00000031086) #30 PRLH (ENSSBOG00000032702) #31 RAB17 (ENSSBOG00000002460) #32 ENSSBOG00000021844 #33 RBM44 (ENSSBOG00000020250) #34 RAMP1 (ENSSBOG00000034673) ENSSBOG00000020844 #36 SCLY (ENSSBOG00000033368) ESPNL (ENSSBOG00000028721) ENSSBOG00000028703 Capuchin MODERN SPECIES 106 NEU2 (ENSCCAG00000032487) INPP5D (ENSCCAG00000019399) ATG16L1 (ENSCCAG00000007793) SAG (ENSCCAG00000019531) DGKD (ENSCCAG00000031333) USP40 (ENSCCAG00000026284) ENSCCAG00000024565 ENSCCAG00000033013 #10 MROH2A (ENSCCAG00000027970) #12 HJURP (ENSCCAG00000036106) #14 ENSCCAG00000026708 TRPM8 (ENSCCAG00000022541) #15 SPP2 (ENSCCAG00000024513) #16 ARL4C (ENSCCAG00000024558) #19 SH3BP4 (ENSCCAG00000020741) #20 AGAP1 (ENSCCAG00000036651) #22 GBX2 (ENSCCAG00000031985) #23 ASB18 (ENSCCAG00000024264) #24 IQCA1 (ENSCCAG00000034378) #25 ACKR3 (ENSCCAG00000013268) #26 COPS8 (ENSCCAG00000036165) #27 COL6A3 (ENSCCAG00000037000) #29 MLPH (ENSCCAG00000024406) #30 PRLH (ENSCCAG00000022877) #31 RAB17 (ENSCCAG00000024584) #32 ENSCCAG00000003358 #33 RBM44 (ENSCCAG00000032705) #34 RAMP1 (ENSCCAG00000032734) ENSCCAG00000004088 #36 SCLY (ENSCCAG00000024192) ESPNL (ENSCCAG00000030132) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00950000185133 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Carnivora ANCESTRAL SPECIES 17 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Felidae ANCESTRAL SPECIES 15 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000167884 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Cat MODERN SPECIES 239 NGEF (ENSFCAG00000032214) NEU2 (ENSFCAG00000038619) INPP5D (ENSFCAG00000011321) ATG16L1 (ENSFCAG00000011322) SAG (ENSFCAG00000011323) DGKD (ENSFCAG00000002072) ENSFCAG00000028768 UGT1A1 (ENSFCAG00000009700) #11 ENSFCAG00000025084 #10 MROH2A (ENSFCAG00000019012) #12 HJURP (ENSFCAG00000045340) #14 TRPM8 (ENSFCAG00000009701) #15 SPP2 (ENSFCAG00000009703) #16 ARL4C (ENSFCAG00000033226) #19 SH3BP4 (ENSFCAG00000023910) #20 AGAP1 (ENSFCAG00000000441) #22 GBX2 (ENSFCAG00000031943) #23 ASB18 (ENSFCAG00000025253) #24 IQCA1 (ENSFCAG00000008499) #25 ACKR3 (ENSFCAG00000012557) #26 COPS8 (ENSFCAG00000013789) #27 COL6A3 (ENSFCAG00000012720) #29 MLPH (ENSFCAG00000012722) #30 PRLH (ENSFCAG00000023990) #31 RAB17 (ENSFCAG00000012724) #32 LRRFIP1 (ENSFCAG00000012725) #33 RBM44 (ENSFCAG00000024366) #34 RAMP1 (ENSFCAG00000027462) UBE2F (ENSFCAG00000001839) #36 SCLY (ENSFCAG00000025440) ESPNL (ENSFCAG00000026252) Panthera ANCESTRAL SPECIES 9 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000167884 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Panthera_a ANCESTRAL SPECIES 6 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000167884 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 leopard MODERN SPECIES 12 NEU2 (ENSPPRG00000009351) INPP5D (ENSPPRG00000011130) ATG16L1 (ENSPPRG00000013858) SAG (ENSPPRG00000016263) DGKD (ENSPPRG00000022746) ENSPPRG00000001460 ENSPPRG00000016397 #10 ENSPPRG00000002019 MROH2A (ENSPPRG00000005126) #12 ENSPPRG00000005246 #14 ENSPPRG00000006139 #15 ENSPPRG00000007515 #15 SPP2 (ENSPPRG00000008027) #16 ARL4C (ENSPPRG00000016572) #19 SH3BP4 (ENSPPRG00000008510) #20 AGAP1 (ENSPPRG00000010171) #22 GBX2 (ENSPPRG00000010648) #23 ASB18 (ENSPPRG00000010778) #24 IQCA1 (ENSPPRG00000012535) #25 ACKR3 (ENSPPRG00000016797) #26 COPS8 (ENSPPRG00000013932) #27 COL6A3 (ENSPPRG00000002843) #29 MLPH (ENSPPRG00000003394) #30 PRLH (ENSPPRG00000003621) #31 RAB17 (ENSPPRG00000003974) #32 LRRFIP1 (ENSPPRG00000005304) #33 RBM44 (ENSPPRG00000007089) #34 RAMP1 (ENSPPRG00000007670) UBE2F (ENSPPRG00000008758) #36 ENSPPRG00000009017 SCLY (ENSPPRG00000009943) lion MODERN SPECIES 8 NGEF (ENSPLOG00000014305) NEU2 (ENSPLOG00000014239) INPP5D (ENSPLOG00000013746) ATG16L1 (ENSPLOG00000013544) SAG (ENSPLOG00000013459) DGKD (ENSPLOG00000013163) ENSPLOG00000013007 ENSPLOG00000012939 #10 UGT1A1 (ENSPLOG00000012783) #11 MROH2A (ENSPLOG00000012113) #12 ENSPLOG00000012049 #14 TRPM8 (ENSPLOG00000011686) #15 SPP2 (ENSPLOG00000011583) #16 ARL4C (ENSPLOG00000011561) #19 SH3BP4 (ENSPLOG00000011535) #20 AGAP1 (ENSPLOG00000011221) #22 GBX2 (ENSPLOG00000011149) #23 ASB18 (ENSPLOG00000011083) #24 IQCA1 (ENSPLOG00000010813) #25 ACKR3 (ENSPLOG00000021956) #26 COPS8 (ENSPLOG00000021940) #27 COL6A3 (ENSPLOG00000021420) #29 MLPH (ENSPLOG00000021064) #30 PRLH (ENSPLOG00000020976) #31 RAB17 (ENSPLOG00000020937) #32 ENSPLOG00000020777 #33 RBM44 (ENSPLOG00000020554) #34 RAMP1 (ENSPLOG00000020505) ENSPLOG00000020308 SCLY (ENSPLOG00000020183) ESPNL (ENSPLOG00000020073) Tiger DUPLICATION Tiger MODERN SPECIES 177 INPP5D (ENSPTIG00000009805) ATG16L1 (ENSPTIG00000013249) SAG (ENSPTIG00000020434) DGKD (ENSPTIG00000000304) ENSPTIG00000007166 ENSPTIG00000009514 ENSPTIG00000010578 ENSPTIG00000011473 #10 MROH2A (ENSPTIG00000012321) #12 ENSPTIG00000018950 #14 TRPM8 (ENSPTIG00000005408) #15 ENSPTIG00000010461 #16 ARL4C (ENSPTIG00000011404) #19 SH3BP4 (ENSPTIG00000012088) #20 ENSPTIG00000013268 #22 ENSPTIG00000014757 #22 IQCA1 (ENSPTIG00000015897) #25 ACKR3 (ENSPTIG00000006941) #26 COPS8 (ENSPTIG00000019830) #27 COL6A3 (ENSPTIG00000005288) #29 MLPH (ENSPTIG00000011594) #30 RAB17 (ENSPTIG00000014452) #32 Tiger MODERN SPECIES 177 NEU2 (ENSPTIG00000009226) INPP5D (ENSPTIG00000009805) ATG16L1 (ENSPTIG00000013249) SAG (ENSPTIG00000020434) DGKD (ENSPTIG00000000304) ENSPTIG00000007166 ENSPTIG00000009514 ENSPTIG00000010578 ENSPTIG00000011473 #10 MROH2A (ENSPTIG00000012321) #12 ENSPTIG00000018950 #14 TRPM8 (ENSPTIG00000005408) #15 ENSPTIG00000010461 #16 ARL4C (ENSPTIG00000011404) #19 SH3BP4 (ENSPTIG00000012088) #20 ENSPTIG00000013268 #22 ENSPTIG00000014757 #22 IQCA1 (ENSPTIG00000015897) #25 ACKR3 (ENSPTIG00000006941) #26 COPS8 (ENSPTIG00000019830) #27 COL6A3 (ENSPTIG00000005288) #29 MLPH (ENSPTIG00000011594) #30 RAB17 (ENSPTIG00000014452) #32 Caniformia ANCESTRAL SPECIES 14 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Canidae ANCESTRAL SPECIES 20 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Canis_lupus ANCESTRAL SPECIES 18 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Dingo MODERN SPECIES 304 NEU2 (ENSCAFG00020023768) ENSCAFG00020023771 ENSCAFG00020023772 ATG16L1 (ENSCAFG00020023778) SAG (ENSCAFG00020023788) DGKD (ENSCAFG00020023838) USP40 (ENSCAFG00020024278) ENSCAFG00020024284 #10 UGT1A1 (ENSCAFG00020024287) #11 MROH2A (ENSCAFG00020024299) #12 ENSCAFG00020024315 #14 TRPM8 (ENSCAFG00020024320) #15 SPP2 (ENSCAFG00020024397) #16 ARL4C (ENSCAFG00020024408) #19 SH3BP4 (ENSCAFG00020024420) #20 AGAP1 (ENSCAFG00020024428) #22 GBX2 (ENSCAFG00020024436) #23 ASB18 (ENSCAFG00020024438) #24 IQCA1 (ENSCAFG00020024445) #25 ACKR3 (ENSCAFG00020024456) #26 COPS8 (ENSCAFG00020024461) #27 COL6A3 (ENSCAFG00020024474) #29 MLPH (ENSCAFG00020024615) #30 PRLH (ENSCAFG00020024617) #31 RAB17 (ENSCAFG00020024618) #32 ENSCAFG00020024621 #33 RBM44 (ENSCAFG00020024622) #34 RAMP1 (ENSCAFG00020024626) UBE2F (ENSCAFG00020024628) #36 SCLY (ENSCAFG00020024632) ESPNL (ENSCAFG00020024636) Dog MODERN SPECIES 17 NGEF (ENSCAFG00845020745) NEU2 (ENSCAFG00845020896) INPP5D (ENSCAFG00845020969) ATG16L1 (ENSCAFG00845021359) SAG (ENSCAFG00845021999) DGKD (ENSCAFG00845022486) USP40 (ENSCAFG00845023517) UGT1A6 (ENSCAFG00845024767) DNAJB3 (ENSCAFG00845025169) #10 MROH2A (ENSCAFG00845025258) #12 HJURP (ENSCAFG00845025475) #14 TRPM8 (ENSCAFG00845025630) #15 SPP2 (ENSCAFG00845025963) #16 ARL4C (ENSCAFG00845026062) #19 SH3BP4 (ENSCAFG00845026088) #20 AGAP1 (ENSCAFG00845026357) #22 ENSCAFG00845027356 ENSCAFG00845027384 GBX2 (ENSCAFG00845027418) #23 ASB18 (ENSCAFG00845027512) #24 IQCA1 (ENSCAFG00845027594) #25 ACKR3 (ENSCAFG00845027671) #26 COPS8 (ENSCAFG00845027880) #27 COL6A3 (ENSCAFG00845028105) #29 MLPH (ENSCAFG00845028517) #30 PRLH (ENSCAFG00845028761) #31 RAB17 (ENSCAFG00845028808) #32 ENSCAFG00845029031 #33 RBM44 (ENSCAFG00845029315) #34 RAMP1 (ENSCAFG00845029374) UBE2F (ENSCAFG00845029467) #36 Red fox MODERN SPECIES 57 ATG16L1 (ENSVVUG00000025467) SAG (ENSVVUG00000025439) DGKD (ENSVVUG00000025429) USP40 (ENSVVUG00000025419) ENSVVUG00000025415 ENSVVUG00000025414 #10 ENSVVUG00000025412 MROH2A (ENSVVUG00000025394) #12 HJURP (ENSVVUG00000025386) #14 ENSVVUG00000025381 ENSVVUG00000025342 #15 ENSVVUG00000025315 #15 SPP2 (ENSVVUG00000025313) #16 ARL4C (ENSVVUG00000025311) #19 SH3BP4 (ENSVVUG00000025306) #20 AGAP1 (ENSVVUG00000025272) #22 GBX2 (ENSVVUG00000025264) #23 Caniformia_b ANCESTRAL SPECIES 13 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970.n Mustelinae ANCESTRAL SPECIES 35 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309.f.a #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 American mink MODERN SPECIES 15 NEU2 (ENSNVIG00000004399) INPP5D (ENSNVIG00000004409) ATG16L1 (ENSNVIG00000004487) SAG (ENSNVIG00000004830) DGKD (ENSNVIG00000005206) USP40 (ENSNVIG00000005270) UGT1A1 (ENSNVIG00000005431) #11 ENSNVIG00000005494 #10 MROH2A (ENSNVIG00000005505) #12 ENSNVIG00000005631 #14 TRPM8 (ENSNVIG00000005660) #15 SPP2 (ENSNVIG00000005759) #16 ARL4C (ENSNVIG00000005778) #19 SH3B4 (ENSNVIG00000005798) #20 ENSNVIG00000005887 AGAP1 (ENSNVIG00000005895) #22 GBX2 (ENSNVIG00000005973) #23 ASB18 (ENSNVIG00000005978) #24 IQCA1 (ENSNVIG00000005994) #25 ACKR3 (ENSNVIG00000006074) #26 ENSNVIG00000006094 #27 Ferret MODERN SPECIES 412 ENSMPUG00000002236 #12 ENSMPUG00000002240 #14 TRPM8 (ENSMPUG00000002248) #15 SPP2 (ENSMPUG00000002325) #16 ARL4C (ENSMPUG00000019267) #19 SH3BP4 (ENSMPUG00000002332) #20 AGAP1 (ENSMPUG00000002334) #22 GBX2 (ENSMPUG00000002403) #23 ENSMPUG00000002417 #24 IQCA1 (ENSMPUG00000002421) #25 ACKR3 (ENSMPUG00000002423) #26 Ursidae ANCESTRAL SPECIES 7 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970.n ENSGT00940000158597 Giant Panda MODERN SPECIES 11 NGEF (ENSAMEG00000016403) NEU2 (ENSAMEG00000016400) INPP5D (ENSAMEG00000016368) ATG16L1 (ENSAMEG00000016324) SAG (ENSAMEG00000016262) DGKD (ENSAMEG00000016226) ENSAMEG00000016212 ENSAMEG00000016164 ENSAMEG00000016205 #10 MROH2A (ENSAMEG00000016117) #12 ENSAMEG00000016113 #14 TRPM8 (ENSAMEG00000016067) #15 SPP2 (ENSAMEG00000016053) #16 ARL4C (ENSAMEG00000016052) #19 SH3BP4 (ENSAMEG00000001790) #20 AGAP1 (ENSAMEG00000001750) #22 GBX2 (ENSAMEG00000031021) #23 IQCA1 (ENSAMEG00000001738) #25 ACKR3 (ENSAMEG00000019789) #26 ENSAMEG00000012089 #27 COL6A3 (ENSAMEG00000008251) #29 MLPH (ENSAMEG00000008402) #30 PRLH (ENSAMEG00000008444) #31 RAB17 (ENSAMEG00000025339) #32 ENSAMEG00000008474 #33 RBM44 (ENSAMEG00000008500) #34 RAMP1 (ENSAMEG00000030941) UBE2F (ENSAMEG00000008551) #36 SCLY (ENSAMEG00000008515) ESPNL (ENSAMEG00000014973) KLHL30 (ENSAMEG00000014960) Ursus ANCESTRAL SPECIES 12 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00950000185374 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00950000185133 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970.n ENSGT00940000158597 American black bear MODERN SPECIES 955 AGAP1 (ENSUAMG00000024333) #22 GBX2 (ENSUAMG00000024599) #23 Polar bear MODERN SPECIES 169 INPP5D (ENSUMAG00000014489) ATG16L1 (ENSUMAG00000014422) SAG (ENSUMAG00000014417) DGKD (ENSUMAG00000013632) USP40 (ENSUMAG00000013473) ENSUMAG00000013463 #10 UGT1A1 (ENSUMAG00000013403) #11 MROH2A (ENSUMAG00000013376) #12 ENSUMAG00000013374 #14 ENSUMAG00000013341 #15 ENSUMAG00000013318 #15 SPP2 (ENSUMAG00000013313) #16 ARL4C (ENSUMAG00000013306) #19 SH3BP4 (ENSUMAG00000013298) #20 ENSUMAG00000013297 AGAP1 (ENSUMAG00000012743) #22 IQCA1 (ENSUMAG00000012664) #25 ACKR3 (ENSUMAG00000012658) #26 COPS8 (ENSUMAG00000012651) #27 COL6A3 (ENSUMAG00000012021) #29 MLPH (ENSUMAG00000011968) #30 PRLH (ENSUMAG00000011965) #31 ENSUMAG00000011963 ENSUMAG00000011956 #33 RBM44 (ENSUMAG00000011930) #34 UBE2F (ENSUMAG00000011895) #36 SCLY (ENSUMAG00000011882) ILKAP (ENSUMAG00000011877) PER2 (ENSUMAG00000011574) TRAF3IP1 (ENSUMAG00000011513) ASB1 (ENSUMAG00000011505) Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Equus ANCESTRAL SPECIES 15 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000167884 ENSGT00940000163820 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Horse MODERN SPECIES 27 DGKD (ENSECAG00000016916) USP40 (ENSECAG00000013493) ENSECAG00000023519 ENSECAG00000058487 ENSECAG00000048565 ENSECAG00000047984 ENSECAG00000030264 #10 MROH2A (ENSECAG00000009998) #12 HJURP (ENSECAG00000010053) #14 ENSECAG00000050711 #15 TRPM8 (ENSECAG00000011427) #15 SPP2 (ENSECAG00000007372) #16 ARL4C (ENSECAG00000000887) #19 SH3BP4 (ENSECAG00000009382) #20 ENSECAG00000044884 AGAP1 (ENSECAG00000014269) #22 GBX2 (ENSECAG00000007324) #23 ASB18 (ENSECAG00000009378) #24 IQCA1 (ENSECAG00000009419) #25 ACKR3 (ENSECAG00000000942) #26 COPS8 (ENSECAG00000013601) #27 COL6A3 (ENSECAG00000020887) #29 MLPH (ENSECAG00000024624) #30 RAB17 (ENSECAG00000010528) #32 PRLH (ENSECAG00000016201) #31 LRRFIP1 (ENSECAG00000016447) #33 RBM44 (ENSECAG00000004979) #34 RAMP1 (ENSECAG00000009250) UBE2F (ENSECAG00000011687) #36 SCLY (ENSECAG00000012094) ESPNL (ENSECAG00000022908) Donkey MODERN SPECIES 10 INPP5D (ENSEASG00005019862) ATG16L1 (ENSEASG00005019888) SAG (ENSEASG00005019896) DGKD (ENSEASG00005019899) ENSEASG00005027116 ENSEASG00005031382 ENSEASG00005032202 #10 UGT1A6 (ENSEASG00005019912) MROH2A (ENSEASG00005019918) #12 HJURP (ENSEASG00005019935) #14 ENSEASG00005019946 #15 ENSEASG00005019972 #15 SPP2 (ENSEASG00005019988) #16 ARL4C (ENSEASG00005025684) #19 SH3BP4 (ENSEASG00005019991) #20 AGAP1 (ENSEASG00005020004) #22 GBX2 (ENSEASG00005020029) #23 ASB18 (ENSEASG00005020036) #24 IQCA1 (ENSEASG00005027257) #25 ACKR3 (ENSEASG00005029174) #26 COPS8 (ENSEASG00005007121) #27 COL6A3 (ENSEASG00005007197) #29 MLPH (ENSEASG00005007335) #30 PRLH (ENSEASG00005007336) #31 RAB17 (ENSEASG00005007339) #32 LRRFIP1 (ENSEASG00005007354) #33 RBM44 (ENSEASG00005007379) #34 ENSEASG00005026664 UBE2F (ENSEASG00005007386) #36 SCLY (ENSEASG00005007391) ESPNL (ENSEASG00005007394) Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Megabat MODERN SPECIES 1605 AGAP1 (ENSPVAG00000008641) #22 Microchiroptera ANCESTRAL SPECIES 2 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Greater horseshoe bat MODERN SPECIES 26 ATG16L1 (ENSRFEG00010004683) SAG (ENSRFEG00010004656) DGKD (ENSRFEG00010004564) USP40 (ENSRFEG00010004446) ENSRFEG00010004416 #10 UGT1A1 (ENSRFEG00010004396) #11 MROH2A (ENSRFEG00010004304) #12 HJURP (ENSRFEG00010004265) #14 TRPM8 (ENSRFEG00010004176) #15 SPP2 (ENSRFEG00010004143) #16 ARL4C (ENSRFEG00010004132) #19 SH3BP4 (ENSRFEG00010004122) #20 ENSRFEG00010004106 ENSRFEG00010004098 ENSRFEG00010004091 AGAP1 (ENSRFEG00010003950) #22 GBX2 (ENSRFEG00010003880) #23 ASB18 (ENSRFEG00010003863) #24 IQCA1 (ENSRFEG00010003824) #25 ACKR3 (ENSRFEG00010003797) #26 ENSRFEG00010003776 #27 COL6A3 (ENSRFEG00010003671) #29 MLPH (ENSRFEG00010003515) #30 PRLH (ENSRFEG00010003477) #31 RAB17 (ENSRFEG00010003447) #32 ENSRFEG00010003288 #33 RBM44 (ENSRFEG00010003149) #34 RAMP1 (ENSRFEG00010003124) ENSRFEG00010003061 #36 SCLY (ENSRFEG00010002956) ESPNL (ENSRFEG00010002895) Microbat MODERN SPECIES 940 NEU2 (ENSMLUG00000028068) INPP5D (ENSMLUG00000017391) ATG16L1 (ENSMLUG00000017395) SAG (ENSMLUG00000017400) DGKD (ENSMLUG00000017404) USP40 (ENSMLUG00000017407) ENSMLUG00000024668 UGT1A6 (ENSMLUG00000017410) ENSMLUG00000017411 #10 MROH2A (ENSMLUG00000017412) #12 HJURP (ENSMLUG00000017421) #14 TRPM8 (ENSMLUG00000017423) #15 SPP2 (ENSMLUG00000017424) #16 ENSMLUG00000025370 SH3BP4 (ENSMLUG00000011869) #20 AGAP1 (ENSMLUG00000005147) #22 GBX2 (ENSMLUG00000011484) #23 ASB18 (ENSMLUG00000011493) #24 IQCA1 (ENSMLUG00000011512) #25 ACKR3 (ENSMLUG00000011535) #26 COPS8 (ENSMLUG00000006750) #27 COL6A3 (ENSMLUG00000006761) #29 MLPH (ENSMLUG00000000438) #30 ENSMLUG00000000444 #31 RAB17 (ENSMLUG00000000446) #32 LRRFIP1 (ENSMLUG00000002001) #33 RBM44 (ENSMLUG00000002010) #34 RAMP1 (ENSMLUG00000002016) UBE2F (ENSMLUG00000001286) #36 SCLY (ENSMLUG00000001291) Artiodactyla ANCESTRAL SPECIES 13 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Suina ANCESTRAL SPECIES 3 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.db #36 ENSGT00940000157773 ENSGT00940000156970 Pig MODERN SPECIES 6 NEU2 (ENSSSCG00000016297) INPP5D (ENSSSCG00000016298) ATG16L1 (ENSSSCG00000016300) SAG (ENSSSCG00000016301) DGKD (ENSSSCG00000009432) USP40 (ENSSSCG00000016306) ENSSSCG00000036274 ENSSSCG00000028217 #10 MROH2A (ENSSSCG00000016305) #12 HJURP (ENSSSCG00000016313) #14 TRPM8 (ENSSSCG00000016314) #15 SPP2 (ENSSSCG00000016315) #16 ARL4C (ENSSSCG00000034293) #19 ENSSSCG00000054647 SH3BP4 (ENSSSCG00000034692) #20 AGAP1 (ENSSSCG00000016317) #22 GBX2 (ENSSSCG00000016319) #23 ASB18 (ENSSSCG00000016318) #24 IQCA1 (ENSSSCG00000016321) #25 ACKR3 (ENSSSCG00000016322) #26 COPS8 (ENSSSCG00000016323) #27 COL6A3 (ENSSSCG00000027331) #29 MLPH (ENSSSCG00000032849) #30 ENSSSCG00000036981 #31 RAB17 (ENSSSCG00000016328) #32 ENSSSCG00000016330 #33 RBM44 (ENSSSCG00000016332) #34 RAMP1 (ENSSSCG00000016331) ENSSSCG00000027723 #36 SCLY (ENSSSCG00000016334) ESPNL (ENSSSCG00000016335) Chacoan peccary MODERN SPECIES 810 NGEF (ENSCWAG00000021480) NEU2 (ENSCWAG00000021469) INPP5D (ENSCWAG00000021461) ATG16L1 (ENSCWAG00000021418) SAG (ENSCWAG00000021393) DGKD (ENSCWAG00000021380) USP40 (ENSCWAG00000021340) ENSCWAG00000021325 #10 ENSCWAG00000021256 MROH2A (ENSCWAG00000021138) #12 ENSCWAG00000021072 #14 TRPM8 (ENSCWAG00000021012) #15 SPP2 (ENSCWAG00000020992) #16 ARL4C (ENSCWAG00000020977) #19 SH3BP4 (ENSCWAG00000020969) #20 AGAP1 (ENSCWAG00000020809) #22 GBX2 (ENSCWAG00000020784) #23 ASB18 (ENSCWAG00000020774) #24 IQCA1 (ENSCWAG00000020641) #25 ACKR3 (ENSCWAG00000020621) #26 COPS8 (ENSCWAG00000020602) #27 ENSCWAG00000020585 #29 ENSCWAG00000020458 #29 ENSCWAG00000020424 #30 PRLH (ENSCWAG00000020415) #31 RAB17 (ENSCWAG00000020392) #32 ENSCWAG00000020311 #33 RBM44 (ENSCWAG00000020263) #34 RAMP1 (ENSCWAG00000020241) UBE2F (ENSCWAG00000020129) #36 SCLY (ENSCWAG00000020097) Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Camelidae ANCESTRAL SPECIES 106 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT01030000236316 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 Arabian camel MODERN SPECIES 31 NEU2 (ENSCDRG00005009286) INPP5D (ENSCDRG00005009359) ATG16L1 (ENSCDRG00005009769) SAG (ENSCDRG00005010393) DGKD (ENSCDRG00005010577) USP40 (ENSCDRG00005010949) UGT1A1 (ENSCDRG00005011851) #11 ENSCDRG00005011972 #10 MROH2A (ENSCDRG00005012005) #12 ENSCDRG00005012337 #14 TRPM8 (ENSCDRG00005012445) #15 SPP2 (ENSCDRG00005013014) #16 ARL4C (ENSCDRG00005013071) #19 SH3BP4 (ENSCDRG00005013122) #20 ENSCDRG00005013165 AGAP1 (ENSCDRG00005013275) #22 GBX2 (ENSCDRG00005014059) #23 ENSCDRG00005014127 #24 IQCA1 (ENSCDRG00005014153) #25 ACKR3 (ENSCDRG00005014249) #26 COPS8 (ENSCDRG00005014262) #27 COL6A3 (ENSCDRG00005014396) #29 MLPH (ENSCDRG00005014879) #30 PRLH (ENSCDRG00005015101) #31 RAB17 (ENSCDRG00005015123) #32 ENSCDRG00005015174 #33 RBM44 (ENSCDRG00005015462) #34 RAMP1 (ENSCDRG00005015618) UBE2F (ENSCDRG00005015678) #36 SCLY (ENSCDRG00005015868) ESPNL (ENSCDRG00005015985) Alpaca MODERN SPECIES 1325 ENSVPAG00000006891 #22 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Pecora ANCESTRAL SPECIES 2 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Percora_a ANCESTRAL SPECIES 1 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Bovidae ANCESTRAL SPECIES 1 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.fb.a #36 ENSGT00940000157773 ENSGT00940000156970 Bovinae ANCESTRAL SPECIES 1 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.fb.a #36 ENSGT00940000157773 ENSGT00940000156970 Bos ANCESTRAL SPECIES ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.y.a #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.fb.a #36 ENSGT00940000157773 ENSGT00940000156970 Bos_b ANCESTRAL SPECIES 1 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.y.a #27 ENSGT00940000156462.C #29 ENSGT00390000013067.a.b ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.fb.a #36 ENSGT00940000157773 Hybrid Bos Indicus MODERN SPECIES 22 NGEF (ENSBIXG00005025372) NEU2 (ENSBIXG00005025290) INPP5D (ENSBIXG00005025252) ATG16L1 (ENSBIXG00005025125) SAG (ENSBIXG00005004262) DGKD (ENSBIXG00005024925) USP40 (ENSBIXG00005006293) ENSBIXG00005007237 ENSBIXG00005024358 #10 MROH2A (ENSBIXG00005024302) #12 HJURP (ENSBIXG00005006477) #14 TRPM8 (ENSBIXG00005023717) #15 ENSBIXG00005023563 #16 ARL4C (ENSBIXG00005023514) #19 SH3BP4 (ENSBIXG00005006169) #20 AGAP1 (ENSBIXG00005023299) #22 GBX2 (ENSBIXG00005022446) #23 ASB18 (ENSBIXG00005022433) #24 IQCA1 (ENSBIXG00005022384) #25 ACKR3 (ENSBIXG00005003805) #26 ENSBIXG00005022302 #27 ENSBIXG00005022233 #29 ENSBIXG00005022201 #29 ENSBIXG00005006159 MLPH (ENSBIXG00005022128) #30 PRLH (ENSBIXG00005022051) #31 RAB17 (ENSBIXG00005022036) #32 ENSBIXG00005021969 #33 RBM44 (ENSBIXG00005021762) #34 RAMP1 (ENSBIXG00005007162) UBE2F (ENSBIXG00005021630) #36 Cow MODERN SPECIES 22 SNORC (ENSBTAG00000018058) NGEF (ENSBTAG00000008942) NEU2 (ENSBTAG00000020672) INPP5D (ENSBTAG00000020173) ATG16L1 (ENSBTAG00000003928) ENSBTAG00000054491 SAG (ENSBTAG00000021480) DGKD (ENSBTAG00000020616) USP40 (ENSBTAG00000000149) UGT1A6 (ENSBTAG00000026181) #11 MROH2A (ENSBTAG00000017434) #12 HJURP (ENSBTAG00000024726) #14 TRPM8 (ENSBTAG00000014652) #15 SPP2 (ENSBTAG00000002030) #16 SH3BP4 (ENSBTAG00000013869) #20 AGAP1 (ENSBTAG00000016504) #22 GBX2 (ENSBTAG00000008898) #23 ASB18 (ENSBTAG00000002024) #24 IQCA1 (ENSBTAG00000013505) #25 ACKR3 (ENSBTAG00000018424) #26 COPS8 (ENSBTAG00000005854) #27 COL6A3 (ENSBTAG00000030190) #29 ENSBTAG00000001538 MLPH (ENSBTAG00000000634) #30 PRLH (ENSBTAG00000017615) #31 RAB17 (ENSBTAG00000017624) #32 LRRFIP1 (ENSBTAG00000005354) #33 RBM44 (ENSBTAG00000010676) #34 RAMP1 (ENSBTAG00000011534) UBE2F (ENSBTAG00000026114) #36 SCLY (ENSBTAG00000017826) Bos_a ANCESTRAL SPECIES 1 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.y.a #27 ENSGT00940000156462.C #29 ENSGT00390000013067.a.b ENSGT00940000162093 ENSGT00940000162360 ENSGT00390000007540 ENSGT00390000001474 ENSGT00940000159702 ENSGT00390000008920.c.b ENSGT00390000003897.s.b.a.a.b.b ENSGT00940000160922 Domestic yak MODERN SPECIES 22 NEU2 (ENSBGRG00000010344) INPP5D (ENSBGRG00000010422) ATG16L1 (ENSBGRG00000010889) SAG (ENSBGRG00000011471) DGKD (ENSBGRG00000011771) USP40 (ENSBGRG00000012788) ENSBGRG00000013091 ENSBGRG00000013370 #10 MROH2A (ENSBGRG00000013396) #12 ENSBGRG00000013914 #14 TRPM8 (ENSBGRG00000014019) #15 SPP2 (ENSBGRG00000014551) #16 ENSBGRG00000014768 ARL4C (ENSBGRG00000014785) #19 SH3BP4 (ENSBGRG00000014833) #20 AGAP1 (ENSBGRG00000014952) #22 GBX2 (ENSBGRG00000016577) #23 ASB18 (ENSBGRG00000016615) #24 IQCA1 (ENSBGRG00000016792) #25 ACKR3 (ENSBGRG00000017157) #26 ENSBGRG00000017207 #27 ENSBGRG00000017439 #29 ENSBGRG00000019627 MLPH (ENSBGRG00000019683) #30 PRLH (ENSBGRG00000020092) #31 ENSBGRG00000020161 ENSBGRG00000020176 #32 ENSBGRG00000020281 #33 RBM44 (ENSBGRG00000020637) #34 RAMP1 (ENSBGRG00000020808) UBE2F (ENSBGRG00000020871) #36 Wild yak MODERN SPECIES 1424 AGAP1 (ENSBMUG00000024630) #22 ENSBMUG00000024558 #23 ASB18 (ENSBMUG00000024550) #24 IQCA1 (ENSBMUG00000024530) #25 ACKR3 (ENSBMUG00000024493) #26 American bison MODERN SPECIES 3334 ENSBBBG00000005901 #14 TRPM8 (ENSBBBG00000022370) #15 SPP2 (ENSBBBG00000005869) #16 ARL4C (ENSBBBG00000022278) #19 SH3BP4 (ENSBBBG00000022258) #20 AGAP1 (ENSBBBG00000022235) #22 ASB18 (ENSBBBG00000022207) #24 IQCA1 (ENSBBBG00000022175) #25 ACKR3 (ENSBBBG00000022118) #26 COPS8 (ENSBBBG00000022111) #27 COL6A3 (ENSBBBG00000022072) #29 ENSBBBG00000022010 MLPH (ENSBBBG00000021985) #30 PRLH (ENSBBBG00000021906) #31 ENSBBBG00000021901 #32 ENSBBBG00000021887 #32 ENSBBBG00000021880 #33 RBM44 (ENSBBBG00000021787) #34 RAMP1 (ENSBBBG00000021714) UBE2F (ENSBBBG00000021692) #36 SCLY (ENSBBBG00000021547) Caprinae ANCESTRAL SPECIES 2 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00960000189764 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00390000016794.b.p.b ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.fb.a #36 ENSGT00940000157773 ENSGT00940000156970 Goat MODERN SPECIES 22 NEU2 (ENSCHIG00000024666) INPP5D (ENSCHIG00000018691) ATG16L1 (ENSCHIG00000026473) SAG (ENSCHIG00000002782) DGKD (ENSCHIG00000025662) USP40 (ENSCHIG00000023695) ENSCHIG00000012439 #10 ENSCHIG00000022816 MROH2A (ENSCHIG00000016141) #12 HJURP (ENSCHIG00000020706) #14 TRPM8 (ENSCHIG00000026726) #15 SPP2 (ENSCHIG00000021100) #16 ARL4C (ENSCHIG00000008457) #19 SH3BP4 (ENSCHIG00000013947) #20 ENSCHIG00000002736 AGAP1 (ENSCHIG00000015729) #22 GBX2 (ENSCHIG00000017047) #23 ASB18 (ENSCHIG00000024789) #24 IQCA1 (ENSCHIG00000005472) #25 ACKR3 (ENSCHIG00000002856) #26 ENSCHIG00000004774 COPS8 (ENSCHIG00000026994) #27 COL6A3 (ENSCHIG00000018312) #29 MLPH (ENSCHIG00000013604) #30 PRLH (ENSCHIG00000003316) #31 RAB17 (ENSCHIG00000016171) #32 LRRFIP1 (ENSCHIG00000006587) #33 RBM44 (ENSCHIG00000004353) #34 RAMP1 (ENSCHIG00000016318) ENSCHIG00000024862 #36 SCLY (ENSCHIG00000014872) Rambouillet Sheep MODERN SPECIES ATG16L1 (ENSOARG00020008250) SAG (ENSOARG00020008029) ENSOARG00020008004 DGKD (ENSOARG00020007641) USP40 (ENSOARG00020007173) ENSOARG00020007139 ENSOARG00020007114 #10 UGT1A1 (ENSOARG00020006230) #11 MROH2A (ENSOARG00020005342) #12 HJURP (ENSOARG00020005263) #14 TRPM8 (ENSOARG00020005009) #15 SPP2 (ENSOARG00020004890) #16 ARL4C (ENSOARG00020004841) #19 SH3BP4 (ENSOARG00020004812) #20 ENSOARG00020004783 AGAP1 (ENSOARG00020004474) #22 ENSOARG00020004419 GBX2 (ENSOARG00020004399) #23 ASB18 (ENSOARG00020004373) #24 IQCA1 (ENSOARG00020004312) #25 ACKR3 (ENSOARG00020004297) #26 COPS8 (ENSOARG00020004238) #27 COL6A3 (ENSOARG00020002421) #29 MLPH (ENSOARG00020002225) #30 PRLH (ENSOARG00020002190) #31 RAB17 (ENSOARG00020002174) #32 ENSOARG00020002080 #33 RBM44 (ENSOARG00020001964) #34 RAMP1 (ENSOARG00020001939) UBE2F (ENSOARG00020001897) #36 SCLY (ENSOARG00020001794) Siberian musk deer MODERN SPECIES 5 HJURP (ENSMMSG00000014874) #14 TRPM8 (ENSMMSG00000014911) #15 SPP2 (ENSMMSG00000015101) #16 ARL4C (ENSMMSG00000015137) #19 SH3BP4 (ENSMMSG00000000006) #20 AGAP1 (ENSMMSG00000000036) #22 GBX2 (ENSMMSG00000000134) #23 ASB18 (ENSMMSG00000000149) #24 IQCA1 (ENSMMSG00000000227) #25 ACKR3 (ENSMMSG00000000451) #26 COPS8 (ENSMMSG00000000478) #27 COL6A3 (ENSMMSG00000001012) #29 MLPH (ENSMMSG00000006245) #30 PRLH (ENSMMSG00000006295) #31 RAB17 (ENSMMSG00000006318) #32 LRRFIP1 (ENSMMSG00000006361) #33 ENSMMSG00000006395 RBM44 (ENSMMSG00000006434) #34 RAMP1 (ENSMMSG00000006556) UBE2F (ENSMMSG00000006608) #36 SCLY (ENSMMSG00000006806) Yarkand deer MODERN SPECIES 12 NGEF (ENSCHYG00000006872) NEU2 (ENSCHYG00000007003) INPP5D (ENSCHYG00000007065) ATG16L1 (ENSCHYG00000007339) SAG (ENSCHYG00000007662) DGKD (ENSCHYG00000007792) USP40 (ENSCHYG00000008357) ENSCHYG00000009282 ENSCHYG00000009504 #10 MROH2A (ENSCHYG00000009621) #12 ENSCHYG00000010830 #14 TRPM8 (ENSCHYG00000010936) #15 SPP2 (ENSCHYG00000011433) #16 ARL4C (ENSCHYG00000011511) #19 SH3BP4 (ENSCHYG00000011561) #20 AGAP1 (ENSCHYG00000011724) #22 GBX2 (ENSCHYG00000013427) #23 ASB18 (ENSCHYG00000013467) #24 IQCA1 (ENSCHYG00000013644) #25 ACKR3 (ENSCHYG00000013874) #26 ENSCHYG00000013906 #27 COL6A3 (ENSCHYG00000014186) #29 MLPH (ENSCHYG00000015476) #30 PRLH (ENSCHYG00000015812) #31 RAB17 (ENSCHYG00000015919) #32 ENSCHYG00000016146 #33 RBM44 (ENSCHYG00000016388) #34 RAMP1 (ENSCHYG00000016650) UBE2F (ENSCHYG00000016770) #36 ENSCHYG00000017305 SCLY (ENSCHYG00000017354) Cetacea ANCESTRAL SPECIES 14 ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.u #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Blue whale MODERN SPECIES 18 NEU2 (ENSBMSG00010001399) INPP5D (ENSBMSG00010001433) ENSBMSG00010001490 ATG16L1 (ENSBMSG00010001521) SAG (ENSBMSG00010001658) DGKD (ENSBMSG00010001684) USP40 (ENSBMSG00010001729) UGT1A1 (ENSBMSG00010001772) #11 ENSBMSG00010001823 #10 MROH2A (ENSBMSG00010001850) #12 ENSBMSG00010001894 #14 TRPM8 (ENSBMSG00010001935) #15 SPP2 (ENSBMSG00010002027) #16 ARL4C (ENSBMSG00010002044) #19 SH3BP4 (ENSBMSG00010002065) #20 AGAP1 (ENSBMSG00010002133) #22 GBX2 (ENSBMSG00010002254) #23 ASB18 (ENSBMSG00010002265) #24 IQCA1 (ENSBMSG00010002286) #25 ACKR3 (ENSBMSG00010002301) #26 ENSBMSG00010002318 #27 COL6A3 (ENSBMSG00010002357) #29 MLPH (ENSBMSG00010002426) #30 PRLH (ENSBMSG00010002502) #31 RAB17 (ENSBMSG00010002510) #32 ENSBMSG00010002545 #33 RBM44 (ENSBMSG00010002605) #34 RAMP1 (ENSBMSG00010002628) ENSBMSG00010002640 UBE2F (ENSBMSG00010002678) #36 SCLY (ENSBMSG00010002795) Odontoceti ANCESTRAL SPECIES 13 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.u #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.u #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00390000008993 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00390000005575.c.a #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.u #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Monodontidae ANCESTRAL SPECIES 10 ENSGT00390000008993 ENSGT01030000234571.b.b.a.a.a ENSGT00950000182944.B.b ENSGT00940000156202.a ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000162757 #10 ENSGT00940000162976 ENSGT00390000005575.c.a #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977.u #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Beluga whale MODERN SPECIES 84 NEU2 (ENSDLEG00000010053) INPP5D (ENSDLEG00000010154) ENSDLEG00000010415 ATG16L1 (ENSDLEG00000010427) SAG (ENSDLEG00000010510) DGKD (ENSDLEG00000010768) USP40 (ENSDLEG00000012848) ENSDLEG00000016375 DNAJB3 (ENSDLEG00000016461) #10 ENSDLEG00000016471 #14 ENSDLEG00000016489 #14 TRPM8 (ENSDLEG00000016562) #15 SPP2 (ENSDLEG00000017377) #16 ARL4C (ENSDLEG00000017399) #19 SH3BP4 (ENSDLEG00000017412) #20 AGAP1 (ENSDLEG00000017441) #22 GBX2 (ENSDLEG00000017681) #23 ASB18 (ENSDLEG00000017688) #24 ENSDLEG00000017709 IQCA1 (ENSDLEG00000017716) #25 ACKR3 (ENSDLEG00000017739) #26 ENSDLEG00000017748 ENSDLEG00000017757 COPS8 (ENSDLEG00000017773) #27 COL6A3 (ENSDLEG00000018104) #29 MLPH (ENSDLEG00000019940) #30 PRLH (ENSDLEG00000019948) #31 RAB17 (ENSDLEG00000019951) #32 LRRFIP1 (ENSDLEG00000019953) #33 RBM44 (ENSDLEG00000019982) #34 ENSDLEG00000019994 Narwhal MODERN SPECIES 302 ENSMMNG00015010455 NEU2 (ENSMMNG00015010417) INPP5D (ENSMMNG00015010358) ATG16L1 (ENSMMNG00015010252) SAG (ENSMMNG00015010210) DGKD (ENSMMNG00015010070) ENSMMNG00015009079 USP40 (ENSMMNG00015009011) ENSMMNG00015008978 #10 ENSMMNG00015008941 ENSMMNG00015008890 #14 TRPM8 (ENSMMNG00015008847) #15 SPP2 (ENSMMNG00015008815) #16 ARL4C (ENSMMNG00015008808) #19 SH3BP4 (ENSMMNG00015008800) #20 AGAP1 (ENSMMNG00015008720) #22 GBX2 (ENSMMNG00015008671) #23 ASB18 (ENSMMNG00015008656) #24 IQCA1 (ENSMMNG00015008583) #25 ACKR3 (ENSMMNG00015008569) #26 COPS8 (ENSMMNG00015008526) #27 ENSMMNG00015008502 #29 ENSMMNG00015008476 #29 MLPH (ENSMMNG00015008434) #30 PRLH (ENSMMNG00015008407) #31 RAB17 (ENSMMNG00015008387) #32 ENSMMNG00015008352 #33 RBM44 (ENSMMNG00015008291) #34 RAMP1 (ENSMMNG00015008271) ENSMMNG00015008264 UBE2F (ENSMMNG00015008200) #36 Vaquita MODERN SPECIES 18 GIGYF2 (ENSPSNG00000004525) SNORC (ENSPSNG00000004482) NGEF (ENSPSNG00000004429) INPP5D (ENSPSNG00000004289) ATG16L1 (ENSPSNG00000004181) SAG (ENSPSNG00000004109) DGKD (ENSPSNG00000004042) USP40 (ENSPSNG00000003975) ENSPSNG00000003921 #10 ENSPSNG00000003839 ENSPSNG00000003808 #14 TRPM8 (ENSPSNG00000003631) #15 SPP2 (ENSPSNG00000003569) #16 ARL4C (ENSPSNG00000003549) #19 SH3BP4 (ENSPSNG00000003528) #20 AGAP1 (ENSPSNG00000003418) #22 GBX2 (ENSPSNG00000003338) #23 ASB18 (ENSPSNG00000003310) #24 IQCA1 (ENSPSNG00000003287) #25 ACKR3 (ENSPSNG00000003273) #26 ENSPSNG00000003245 ENSPSNG00000003210 #27 COL6A3 (ENSPSNG00000002947) #29 MLPH (ENSPSNG00000002756) #30 PRLH (ENSPSNG00000002713) #31 RAB17 (ENSPSNG00000002680) #32 ENSPSNG00000002631 #33 RBM44 (ENSPSNG00000002552) #34 RAMP1 (ENSPSNG00000002530) UBE2F (ENSPSNG00000002452) #36 SCLY (ENSPSNG00000002340) Dolphin MODERN SPECIES 4788 AGAP1 (ENSTTRG00000007444) #22 GBX2 (ENSTTRG00000007446) #23 Sperm whale MODERN SPECIES 11 SCLY (ENSPCTG00005009247) UBE2F (ENSPCTG00005008897) #36 RAMP1 (ENSPCTG00005008839) RBM44 (ENSPCTG00005008672) #34 LRRFIP1 (ENSPCTG00005008610) #33 RAB17 (ENSPCTG00005008547) #32 PRLH (ENSPCTG00005008504) #31 ENSPCTG00005022077 #30 ENSPCTG00005022060 #29 ENSPCTG00005022048 #29 COPS8 (ENSPCTG00005022033) #27 ENSPCTG00005022024 ACKR3 (ENSPCTG00005022020) #26 IQCA1 (ENSPCTG00005022007) #25 ASB18 (ENSPCTG00005021991) #24 AGAP1 (ENSPCTG00005021347) #22 SPP2 (ENSPCTG00005021218) #16 TRPM8 (ENSPCTG00005021020) #15 HJURP (ENSPCTG00005020990) #14 DNAJB3 (ENSPCTG00005020979) #10 ENSPCTG00005020965 ENSPCTG00005020954 UGT1A1 (ENSPCTG00005020821) #11 USP40 (ENSPCTG00005020441) DGKD (ENSPCTG00005020040) ATG16L1 (ENSPCTG00005019908) EFHD1 (ENSPCTG00005019837) KCNJ13 (ENSPCTG00005019789) GIGYF2 (ENSPCTG00005019661) NEU2 (ENSPCTG00005019547) ENSPCTG00005019529 Atlantogenata ANCESTRAL SPECIES 74 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 Xenarthra ANCESTRAL SPECIES 697 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 Sloth MODERN SPECIES 4621 AGAP1 (ENSCHOG00000010057) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1759 ENSDNOG00000042359 #22 GBX2 (ENSDNOG00000016724) #23 ENSDNOG00000037746 ASB18 (ENSDNOG00000043632) #24 IQCA1 (ENSDNOG00000008579) #25 ENSDNOG00000031759 ACKR3 (ENSDNOG00000011040) #26 ENSDNOG00000035628 #27 Armadillo MODERN SPECIES 1793 SH3BP4 (ENSDNOG00000048631) #20 ENSDNOG00000044828 #22 Afrotheria ANCESTRAL SPECIES 80 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 ENSGT00940000158597 Tenrec MODERN SPECIES 4986 ENSETEG00000019907 #22 Afrotheria_a ANCESTRAL SPECIES 79 ENSGT00940000153936.a ENSGT00950000182887.C.b.a ENSGT00940000159041 ENSGT00940000157267 ENSGT00940000163976 ENSGT00940000163820 ENSGT00940000162976 ENSGT00940000162757 #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000157773 ENSGT00940000156970 ENSGT00940000158597 Elephant DUPLICATION Elephant MODERN SPECIES 450 ENSLAFG00000029526 ENSLAFG00000031114 ENSLAFG00000030587 ENSLAFG00000026824 ENSLAFG00000028960 ENSLAFG00000031343 #10 UGT1A1 (ENSLAFG00000031174) #11 ENSLAFG00000027571 #12 ENSLAFG00000022466 #12 ENSLAFG00000008536 #14 TRPM8 (ENSLAFG00000015515) #15 SPP2 (ENSLAFG00000015239) #16 ARL4C (ENSLAFG00000028097) #19 SH3BP4 (ENSLAFG00000015642) #20 ENSLAFG00000032232 #22 ENSLAFG00000003064 #22 GBX2 (ENSLAFG00000009536) #23 IQCA1 (ENSLAFG00000017002) #25 ACKR3 (ENSLAFG00000003100) #26 COPS8 (ENSLAFG00000008617) #27 COL6A3 (ENSLAFG00000013476) #29 MLPH (ENSLAFG00000016172) #30 PRLH (ENSLAFG00000021604) #31 RAB17 (ENSLAFG00000017466) #32 LRRFIP1 (ENSLAFG00000015782) #33 RBM44 (ENSLAFG00000004044) #34 ENSLAFG00000006470 UBE2F (ENSLAFG00000014184) #36 SCLY (ENSLAFG00000012853) ENSLAFG00000027257 ESPNL (ENSLAFG00000018304) Elephant MODERN SPECIES 450 ENSLAFG00000027547 ENSLAFG00000029526 ENSLAFG00000031114 ENSLAFG00000030587 ENSLAFG00000026824 ENSLAFG00000028960 ENSLAFG00000031343 #10 UGT1A1 (ENSLAFG00000031174) #11 ENSLAFG00000027571 #12 ENSLAFG00000022466 #12 ENSLAFG00000008536 #14 TRPM8 (ENSLAFG00000015515) #15 SPP2 (ENSLAFG00000015239) #16 ARL4C (ENSLAFG00000028097) #19 SH3BP4 (ENSLAFG00000015642) #20 ENSLAFG00000032232 #22 ENSLAFG00000003064 #22 GBX2 (ENSLAFG00000009536) #23 IQCA1 (ENSLAFG00000017002) #25 ACKR3 (ENSLAFG00000003100) #26 COPS8 (ENSLAFG00000008617) #27 COL6A3 (ENSLAFG00000013476) #29 MLPH (ENSLAFG00000016172) #30 PRLH (ENSLAFG00000021604) #31 RAB17 (ENSLAFG00000017466) #32 LRRFIP1 (ENSLAFG00000015782) #33 RBM44 (ENSLAFG00000004044) #34 ENSLAFG00000006470 UBE2F (ENSLAFG00000014184) #36 SCLY (ENSLAFG00000012853) ENSLAFG00000027257 Hyrax MODERN SPECIES 4249 AGAP1 (ENSPCAG00000008073) #22 Marsupialia ANCESTRAL SPECIES 31 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000159677.d #11 ENSGT00940000163820 ENSGT00940000163976 ENSGT00940000157267 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000156322.g ENSGT00940000154793.C.`b.a ##22 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT01100000263477.A.b.a.a.a.a.a.b.b ENSGT01100000263477.A.b.a.a.a.a.b ENSGT01100000263477.A.b.a.a.a.a.a.a ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000159677.d #11 ENSGT00940000163820 ENSGT00940000163976 ENSGT00940000157267 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000156322.g ENSGT00940000154793.C.`b.a ##22 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT01100000263477.A.b.a.a.a.a.a.b.b ENSGT01100000263477.A.b.a.a.a.a.b ENSGT01100000263477.A.b.a.a.a.a.a.a.b ENSGT00390000000977.b #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b.a #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 Diprotodontia ANCESTRAL SPECIES 73 ENSGT00950000182997.a.b.b.a ENSGT00940000160683 ENSGT00940000161997.a ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000159677.d #11 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT01100000263477.A.b.a.a.a.a.a.b.b Diprotodontia_a ANCESTRAL SPECIES 70 ENSGT00950000182997.a.b.b.a ENSGT00940000160683 ENSGT00940000161997.a ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000159677.d #11 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT01100000263477.A.b.a.a.a.a.a.b.b.b koala MODERN SPECIES 262 ENSPCIG00000030738 ASB1 (ENSPCIG00000026382) TRAF3IP1 (ENSPCIG00000026388) ENSPCIG00000026391 ENSPCIG00000026395 ARL4C (ENSPCIG00000003836) #19 SH3BP4 (ENSPCIG00000011233) #20 AGAP1 (ENSPCIG00000028818) #22 ENSPCIG00000028824 GBX2 (ENSPCIG00000037428) #23 ASB18 (ENSPCIG00000028826) #24 IQCA1 (ENSPCIG00000028828) #25 Common wonbat MODERN SPECIES 787 TWIST2 (ENSVURG00010010490) ASB1 (ENSVURG00010010493) ENSVURG00010010502 ENSVURG00010010534 ENSVURG00010010536 ENSVURG00010010549 ENSVURG00010010564 ARL4C (ENSVURG00010010587) #19 SH3BP4 (ENSVURG00010010594) #20 ENSVURG00010010609 ##22 ENSVURG00010010616 #22 GBX2 (ENSVURG00010010623) #23 ASB18 (ENSVURG00010010631) #24 IQCA1 (ENSVURG00010010657) #25 ENSVURG00010010702 ACKR3 (ENSVURG00010010709) #26 ENSVURG00010010721 Wallaby MODERN SPECIES 6298 AGAP1 (ENSMEUG00000011729) #22 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000000317 UGT1A1 (ENSSHAG00000001438) #11 ENSSHAG00000004731 ENSSHAG00000005142 HDAC4 (ENSSHAG00000004439) TWIST2 (ENSSHAG00000003328) ENSSHAG00000007519 ENSSHAG00000030077 ENSSHAG00000009352 ENSSHAG00000010002 ENSSHAG00000026060 ENSSHAG00000021326 ENSSHAG00000029850 #19 SH3BP4 (ENSSHAG00000006764) #20 ENSSHAG00000030800 AGAP1 (ENSSHAG00000015980) #22 GBX2 (ENSSHAG00000000902) #23 ASB18 (ENSSHAG00000015617) #24 IQCA1 (ENSSHAG00000014949) #25 ACKR3 (ENSSHAG00000014627) #26 ENSSHAG00000022713 ENSSHAG00000028762 ENSSHAG00000027746 ENSSHAG00000024689 ENSSHAG00000013714 COPS8 (ENSSHAG00000031168) #27 COL6A3 (ENSSHAG00000010297) #29 ENSSHAG00000009549 #30 PRLH (ENSSHAG00000027048) #31 RAB17 (ENSSHAG00000030851) #32 ENSSHAG00000007814 #33 Opossum DUPLICATION Opossum MODERN SPECIES 1 EIF4H (ENSMODG00000013851) CLIP2 (ENSMODG00000013885) TWIST2 (ENSMODG00000001412) ENSMODG00000027430 ASB1 (ENSMODG00000002363) TRAF3IP1 (ENSMODG00000002477) ENSMODG00000049860 ENSMODG00000045206 ENSMODG00000038112 ENSMODG00000028175 ENSMODG00000027484 ENSMODG00000041716 ARL4C (ENSMODG00000023112) #19 SH3BP4 (ENSMODG00000002867) #20 ENSMODG00000038703 ENSMODG00000002915 #22 ENSMODG00000007458 #29 ENSMODG00000041638 #29 COPS8 (ENSMODG00000007474) #27 T2R23 (ENSMODG00000007503) T2R21 (ENSMODG00000042113) T2R22 (ENSMODG00000023111) MODO-T2R28 (ENSMODG00000023110) T2R26 (ENSMODG00000023109) T2R27 (ENSMODG00000040964) ACKR3 (ENSMODG00000023108) #26 ASB18 (ENSMODG00000038852) #24 GBX2 (ENSMODG00000007531) #23 ENSMODG00000007538 #22 B3GNT7 (ENSMODG00000041614) ENSMODG00000002470 Opossum MODERN SPECIES 1 CAPN10 (ENSMODG00000002704) ENSMODG00000036608 ENSMODG00000002680 CHRNG (ENSMODG00000002666) CHRND (ENSMODG00000002646) ECEL1 (ENSMODG00000002624) ENSMODG00000002592 ENSMODG00000043268 DIS3L2 (ENSMODG00000025712) NPPC (ENSMODG00000002518) COPS7B (ENSMODG00000002502) PDE6D (ENSMODG00000046234) NMUR1 (ENSMODG00000002476) ENSMODG00000002470 B3GNT7 (ENSMODG00000041614) ENSMODG00000007538 #22 GBX2 (ENSMODG00000007531) #23 ASB18 (ENSMODG00000038852) #24 ACKR3 (ENSMODG00000023108) #26 T2R27 (ENSMODG00000040964) T2R26 (ENSMODG00000023109) MODO-T2R28 (ENSMODG00000023110) T2R22 (ENSMODG00000023111) T2R21 (ENSMODG00000042113) T2R23 (ENSMODG00000007503) COPS8 (ENSMODG00000007474) #27 ENSMODG00000041638 #29 ENSMODG00000007458 #29 ENSMODG00000002915 #22 ENSMODG00000038703 SH3BP4 (ENSMODG00000002867) #20 Platypus MODERN SPECIES 18 MYL1 (ENSOANG00000006278) LANCL1 (ENSOANG00000011057) CPS1 (ENSOANG00000011059) ERBB4 (ENSOANG00000007021) ENSOANG00000015675 MREG (ENSOANG00000036014) FN1 (ENSOANG00000006836) ATIC (ENSOANG00000005769) ABCA12 (ENSOANG00000012250) BARD1 (ENSOANG00000048485) VWC2L (ENSOANG00000012633) ENSOANG00000050142 ENSOANG00000029131 IKZF2 (ENSOANG00000009330) SH3BP4 (ENSOANG00000012552) #20 AGAP1 (ENSOANG00000013415) #22 GBX2 (ENSOANG00000039901) #23 ASB18 (ENSOANG00000002384) #24 ACKR3 (ENSOANG00000003999) #26 COPS8 (ENSOANG00000047446) #27 COL6A3 (ENSOANG00000011917) #29 ENSOANG00000001294 ENSOANG00000014727 #30 RAB17 (ENSOANG00000011498) #32 ENSOANG00000011499 #33 ENSOANG00000000913 ENSOANG00000048771 UBE2F (ENSOANG00000003208) #36 ENSOANG00000021828 ARL4C (ENSOANG00000041538) #19 ENSOANG00000049582 #16 Sauria ANCESTRAL SPECIES 32 ENSGT00940000155311.B ENSGT00940000154486.b.b ENSGT00940000154486.b.a.a.b ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00940000156462.B ##29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 Archelosauria ANCESTRAL SPECIES 8 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.a.b ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00940000156462.B ##29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 Archosauria ANCESTRAL SPECIES 6 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.a.b ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000163794 ENSGT00390000008926 Aves ANCESTRAL SPECIES 8 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.b ##11 ENSGT00940000159677.c.a.b.b ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000163794 ENSGT00390000008926 Neognathae ANCESTRAL SPECIES 6 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.a.b.b ##11 ENSGT00940000159677.c.a.a.a.b.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.a.a.a.b.b.b.a ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000159677.c.b.a.c.b ##11 ENSGT00940000159677.c.a.a.a.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.a.a.a.b.b.a ##11 ENSGT00940000159677.c.a.a.a.b.b.b.a ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 Anatidae ANCESTRAL SPECIES 10 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.a.a.a.b.b.a.a ##11 ENSGT00940000159677.c.a.b.b ##11 ENSGT00940000159677.c.a.a.a.a ##11 ENSGT00940000159677.c.a.a.a.b.b.b.a ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 Pink-footed goose MODERN SPECIES 18 ENSABRG00000022281 TRPM8 (ENSABRG00000022279) #15 ENSABRG00000022277 AGAP1 (ENSABRG00000022257) #22 GBX2 (ENSABRG00000022255) #23 ASB18 (ENSABRG00000022254) #24 IQCA1 (ENSABRG00000022253) #25 ACKR3 (ENSABRG00000022251) #26 COPS8 (ENSABRG00000022248) #27 COL6A3 (ENSABRG00000022232) #29 MLPH (ENSABRG00000022201) #30 PRLH (ENSABRG00000022194) #31 ENSABRG00000022192 RAB17 (ENSABRG00000022190) #32 LRRFIP1 (ENSABRG00000022185) #33 ENSABRG00000022183 RAMP1 (ENSABRG00000022182) UBE2F (ENSABRG00000022177) #36 ENSABRG00000022171 Duck MODERN SPECIES 25 TWIST2 (ENSAPLG00000000878) ENSAPLG00000019609 ASB1 (ENSAPLG00000013688) ENSAPLG00000013889 ENSAPLG00000020501 ENSAPLG00000014141 ENSAPLG00000017911 ENSAPLG00000017509 ##11 ENSAPLG00000017238 ##11 ENSAPLG00000030959 ##11 ENSAPLG00000014719 ##11 SH3BP4 (ENSAPLG00000026577) #20 ARL4C (ENSAPLG00000015708) #19 SPP2 (ENSAPLG00000014858) #16 TRPM8 (ENSAPLG00000014898) #15 AGAP1 (ENSAPLG00000005893) #22 ASB18 (ENSAPLG00000027146) #24 IQCA1 (ENSAPLG00000011968) #25 ACKR3 (ENSAPLG00000002306) #26 COPS8 (ENSAPLG00000016947) #27 COL6A3 (ENSAPLG00000005511) #29 MLPH (ENSAPLG00000005150) #30 PRLH (ENSAPLG00000023643) #31 RAB17 (ENSAPLG00000004880) #32 ENSAPLG00000004640 #33 ENSAPLG00000024288 RAMP1 (ENSAPLG00000004363) ENSAPLG00000004341 ENSAPLG00000012522 ENSAPLG00000012593 MREG (ENSAPLG00000012631) Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000158212.B ENSGT00940000154486.b.b ENSGT00940000154486.b.a.a.b ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a.d ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000177452 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000158212.B ENSGT00940000154486.b.b ENSGT00940000154486.b.a.a.b ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a.d ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00950000185272 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000177452 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 Chicken MODERN SPECIES 36 COL18A1 (ENSGALG00010014162) AHR1B (ENSGALG00010014105) AHR2 (ENSGALG00010013824) NDUFA10 (ENSGALG00010013783) HDAC4 (ENSGALG00010013697) TWIST2 (ENSGALG00010013612) ENSGALG00010015254 ASB1 (ENSGALG00010013494) TRAF3IP1 (ENSGALG00010015025) USP40 (ENSGALG00010011106) UGT1A1 (ENSGALG00010011085) ##11 SH3BP4 (ENSGALG00010010719) #20 ARL4C (ENSGALG00010012744) #19 SPP2 (ENSGALG00010012708) #16 TRPM8 (ENSGALG00010012680) #15 AGAP1 (ENSGALG00010012571) #22 GBX2 (ENSGALG00010012489) #23 ASB18 (ENSGALG00010012474) #24 IQCA1 (ENSGALG00010012454) #25 CXCR7 (ENSGALG00010012429) #26 COPS8 (ENSGALG00010012447) #27 COL6A3 (ENSGALG00010012362) #29 MLPH (ENSGALG00010012325) #30 PRLH (ENSGALG00010012236) RAB17 (ENSGALG00010012215) #32 LRRFIP1 (ENSGALG00010012194) #33 ENSGALG00010012120 UBE2F (ENSGALG00010012100) #36 IFNL3 (ENSGALG00010012050) ENSGALG00010012045 IFNL3A (ENSGALG00010012030) Turkey MODERN SPECIES 27 SLC19A1 (ENSMGAG00000001945) ENSMGAG00000002118 ENSMGAG00000002128 NDUFA10 (ENSMGAG00000002122) HDAC4 (ENSMGAG00000002138) TWIST2 (ENSMGAG00000002218) ENSMGAG00000018428 ASB1 (ENSMGAG00000002227) TRAF3IP1 (ENSMGAG00000002236) ENSMGAG00000002277 ENSMGAG00000002356 ##11 ENSMGAG00000017958 ##11 SH3BP4 (ENSMGAG00000002524) #20 ENSMGAG00000002620 #16 TRPM8 (ENSMGAG00000002627) #15 AGAP1 (ENSMGAG00000002537) #22 ASB18 (ENSMGAG00000002766) #24 IQCA1 (ENSMGAG00000002818) #25 ACKR3 (ENSMGAG00000016132) #26 COPS8 (ENSMGAG00000002861) #27 COL6A3 (ENSMGAG00000002889) #29 MLPH (ENSMGAG00000003050) #30 RAB17 (ENSMGAG00000003135) #32 PRLH (ENSMGAG00000018152) #31 ENSMGAG00000019302 #33 ENSMGAG00000003145 #33 ENSMGAG00000003218 RAMP1 (ENSMGAG00000003225) ENSMGAG00000003229 #36 ENSMGAG00000003250 ENSMGAG00000003269 Japanese quail MODERN SPECIES 25 USP40 (ENSCJPG00005012796) ENSCJPG00005012797 ##11 ENSCJPG00005012798 ##11 ENSCJPG00005012799 ##11 ENSCJPG00005012800 ENSCJPG00005012801 ##11 ENSCJPG00005012802 ##11 ENSCJPG00005012803 ##11 ENSCJPG00005012804 ##11 ENSCJPG00005012805 ##11 SH3BP4 (ENSCJPG00005013057) #20 ARL4C (ENSCJPG00005013058) #19 ENSCJPG00005013062 SPP2 (ENSCJPG00005013063) #16 TRPM8 (ENSCJPG00005013064) #15 AGAP1 (ENSCJPG00005013461) #22 GBX2 (ENSCJPG00005013758) #23 ASB18 (ENSCJPG00005013759) #24 IQCA1 (ENSCJPG00005013760) #25 ACKR3 (ENSCJPG00005013761) #26 COPS8 (ENSCJPG00005013762) #27 NAB1 (ENSCJPG00005013769) NEMP2 (ENSCJPG00005013770) MFSD6 (ENSCJPG00005013771) HIBCH (ENSCJPG00005013772) ENSCJPG00005013773 MSTN (ENSCJPG00005013774) PMS1 (ENSCJPG00005013775) ORMDL1 (ENSCJPG00005013812) OSGEPL1 (ENSCJPG00005013813) ASNSD1 (ENSCJPG00005013814) Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.c.a.b.b ##11 ENSGT00940000159677.c.a.a.a.b.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.a.a.a.b.b.b.b ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000159677.c.b.a.c.b ##11 ENSGT00940000159677.c.a.a.a.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 Passeriformes ANCESTRAL SPECIES 6 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000159677.c.b.a.c.b ##11 ENSGT00940000159677.c.a.a.a.b.b.b.b ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00960000192637 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000160596.a.a.b ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 Great tit MODERN SPECIES 27 PCBP3 (ENSPMJG00000006345) ENSPMJG00000006352 COL6A2 (ENSPMJG00000006389) FTCD (ENSPMJG00000006430) ENSPMJG00000006435 MCM3AP (ENSPMJG00000006438) YBEY (ENSPMJG00000006440) ENSPMJG00000006441 ENSPMJG00000006442 UGT1A1 (ENSPMJG00000006443) ##11 SH3BP4 (ENSPMJG00000006446) #20 ARL4C (ENSPMJG00000006522) #19 SPP2 (ENSPMJG00000006527) #16 ENSPMJG00000006532 TRPM8 (ENSPMJG00000006537) #15 AGAP1 (ENSPMJG00000006600) #22 ENSPMJG00000006646 GBX2 (ENSPMJG00000006648) #23 ASB18 (ENSPMJG00000006649) #24 ENSPMJG00000006652 #25 ACKR3 (ENSPMJG00000006683) #26 COPS8 (ENSPMJG00000006686) #27 ENSPMJG00000006689 ENSPMJG00000006694 COL6A3 (ENSPMJG00000006699) #29 MLPH (ENSPMJG00000006731) #30 PRLH (ENSPMJG00000006757) #31 RAB17 (ENSPMJG00000006759) #32 LRRFIP1 (ENSPMJG00000006762) #33 ENSPMJG00000006782 RAMP1 (ENSPMJG00000006785) Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000157440 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000158212.B ENSGT00950000183022.b ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000155682 ENSGT00390000005581.a ENSGT01030000234722.a.a.b.b ENSGT00940000156322 ENSGT00950000183170.b.b ENSGT00390000007989 ENSGT00940000160270.s.b #15 ENSGT00940000154793.C.ab #22 ENSGT00960000192637 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000160596.a.a.b.a ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 Flycatcher MODERN SPECIES 26 ENSFALG00000024674 ENSFALG00000003949 SLC19A1 (ENSFALG00000003945) COL18A1 (ENSFALG00000003898) ENSFALG00000024703 ENSFALG00000028595 ENSFALG00000003870 NDUFA10 (ENSFALG00000003854) ENSFALG00000025269 HDAC4 (ENSFALG00000003839) TWIST2 (ENSFALG00000014990) ASB1 (ENSFALG00000003836) TRAF3IP1 (ENSFALG00000003831) ENSFALG00000003826 ENSFALG00000000620 #15 AGAP1 (ENSFALG00000000637) #22 GBX2 (ENSFALG00000015143) #23 ENSFALG00000024037 IQCA1 (ENSFALG00000000643) #25 ACKR3 (ENSFALG00000015156) #26 COPS8 (ENSFALG00000026238) #27 COL6A3 (ENSFALG00000012704) #29 MLPH (ENSFALG00000012767) #30 PRLH (ENSFALG00000027013) #31 RAB17 (ENSFALG00000012783) #32 LRRFIP1 (ENSFALG00000028055) #33 ENSFALG00000023851 RAMP1 (ENSFALG00000025699) ENSFALG00000012804 #36 ENSFALG00000012817 ENSFALG00000012826 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.b ENSGT00940000154486.b.a.a.b.a ENSGT00940000154486.b.b ENSGT00940000158212.B ENSGT00950000183022.b ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000155682 ENSGT00390000005581.a ENSGT01030000234722.a.a.b.b ENSGT00940000156322 ENSGT00950000183170.b.b ENSGT00390000007989 ENSGT00940000160270.s.b #15 ENSGT00940000154793.C.ab #22 ENSGT00960000192637 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000160596.a.a.b.a ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000177452 ENSGT00940000159224 ENSGT00940000154349 #36 Medium ground finch MODERN SPECIES 235 ENSGFOG00000006474 #15 ENSGFOG00000006487 #15 AGAP1 (ENSGFOG00000006523) #22 GBX2 (ENSGFOG00000006587) #23 ASB18 (ENSGFOG00000006601) #24 IQCA1 (ENSGFOG00000006631) #25 ACKR3 (ENSGFOG00000006657) #26 COPS8 (ENSGFOG00000006662) #27 Passeroidea ANCESTRAL SPECIES 8 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.b ENSGT00940000154486.b.a.a.b.a ENSGT00940000154486.b.b ENSGT00940000158212.B ENSGT00950000183022.b ENSGT00940000162768.B ENSGT00940000163601 ENSGT00940000155682 ENSGT00390000005581.a ENSGT01030000234722.a.a.b.b ENSGT00940000156322 ENSGT00950000183170.b.b ENSGT00390000007989 ENSGT00940000160270.s.a #15 ENSGT00940000154793.C.ab #22 ENSGT00960000192637 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000160596.a.a.b.a ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000177452 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 Common canary MODERN SPECIES 8 HDAC4 (ENSSCAG00000009386) NDUFA10 (ENSSCAG00000009359) ENSSCAG00000009324 ENSSCAG00000009313 ENSSCAG00000009304 SLC19A1 (ENSSCAG00000009294) ENSSCAG00000009284 ENSSCAG00000009257 ENSSCAG00000009229 ENSSCAG00000009223 ENSSCAG00000009219 YBEY (ENSSCAG00000009216) MCM3AP (ENSSCAG00000009107) POFUT2 (ENSSCAG00000009071) TRPM8 (ENSSCAG00000009044) #15 AGAP1 (ENSSCAG00000009030) #22 GBX2 (ENSSCAG00000009011) #23 IQCA1 (ENSSCAG00000008997) #25 ACKR3 (ENSSCAG00000008987) #26 COPS8 (ENSSCAG00000008963) #27 COL6A3 (ENSSCAG00000008871) #29 MLPH (ENSSCAG00000008835) #30 PRLH (ENSSCAG00000008829) #31 RAB17 (ENSSCAG00000008822) #32 ENSSCAG00000008808 #33 ENSSCAG00000008802 #33 RAMP1 (ENSSCAG00000008799) UBE2F (ENSSCAG00000008788) #36 ENSSCAG00000008781 ENSSCAG00000008776 MREG (ENSSCAG00000008744) Zebra finch MODERN SPECIES 29 NDUFA10 (ENSTGUG00000003244) ENSTGUG00000027043 ENSTGUG00000003263 COL18A1 (ENSTGUG00000003295) SLC19A1 (ENSTGUG00000016708) ENSTGUG00000003316 ENSTGUG00000003341 COL6A2 (ENSTGUG00000003386) FTCD (ENSTGUG00000003422) ENSTGUG00000003453 MCM3AP (ENSTGUG00000003458) YBEY (ENSTGUG00000003495) POFUT2 (ENSTGUG00000003497) ENSTGUG00000019313 TRPM8 (ENSTGUG00000003521) #15 AGAP1 (ENSTGUG00000003583) #22 ENSTGUG00000029585 GBX2 (ENSTGUG00000003625) #23 ACKR3 (ENSTGUG00000003645) #26 COPS8 (ENSTGUG00000003647) #27 ENSTGUG00000024557 COL6A3 (ENSTGUG00000003667) #29 MLPH (ENSTGUG00000003766) #30 PRLH (ENSTGUG00000020810) #31 RAB17 (ENSTGUG00000003786) #32 ENSTGUG00000003797 #33 ENSTGUG00000021528 RAMP1 (ENSTGUG00000003837) UBE2F (ENSTGUG00000003839) #36 ENSTGUG00000003857 ENSTGUG00000003861 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000165503 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.c.a.b.b ##11 ENSGT00940000159677.c.a.a.a.b.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00390000014310 ENSGT00940000163794 ENSGT00390000008926 Golden eagle MODERN SPECIES 22 NDUFA10 (ENSACCG00020012200) HDAC4 (ENSACCG00020012255) TWIST2 (ENSACCG00020012284) ASB1 (ENSACCG00020012311) TRAF3IP1 (ENSACCG00020012354) ENSACCG00020012407 USP40 (ENSACCG00020012471) ENSACCG00020012585 ##11 ENSACCG00020012631 ##11 ENSACCG00020012646 ##11 ENSACCG00020012664 ##11 SH3BP4 (ENSACCG00020012689) #20 ARL4C (ENSACCG00020012720) #19 SPP2 (ENSACCG00020012732) #16 TRPM8 (ENSACCG00020013728) #15 AGAP1 (ENSACCG00020014325) #22 GBX2 (ENSACCG00020014381) #23 ENSACCG00020014394 #24 IQCA1 (ENSACCG00020014455) #25 ACKR3 (ENSACCG00020014526) #26 COPS8 (ENSACCG00020014535) #27 COL6A3 (ENSACCG00020014569) #29 ENSACCG00020014628 MLPH (ENSACCG00020014641) #30 PRLH (ENSACCG00020014655) #31 RAB17 (ENSACCG00020014666) #32 LRRFIP1 (ENSACCG00020014774) #33 RAMP1 (ENSACCG00020014879) UBE2F (ENSACCG00020014904) #36 ENSACCG00020014939 ENSACCG00020014957 Kakapo MODERN SPECIES 22 ENSSHBG00005021276 ##11 ENSSHBG00005021277 ##11 ENSSHBG00005021278 ##11 ENSSHBG00005021279 ##11 ENSSHBG00005021280 ##11 ENSSHBG00005021281 ##11 ENSSHBG00005021282 ##11 ENSSHBG00005021283 ##11 ENSSHBG00005021284 ##11 ENSSHBG00005021285 ##11 SH3BP4 (ENSSHBG00005021287) #20 ENSSHBG00005021288 ARL4C (ENSSHBG00005021289) #19 SPP2 (ENSSHBG00005021290) #16 TRPM8 (ENSSHBG00005021292) #15 AGAP1 (ENSSHBG00005021297) #22 GBX2 (ENSSHBG00005021301) #23 ASB18 (ENSSHBG00005021302) #24 ENSSHBG00005000880 #25 ACKR3 (ENSSHBG00005010086) #26 COPS8 (ENSSHBG00005010183) #27 ENSSHBG00005010204 COL6A3 (ENSSHBG00005010259) #29 MLPH (ENSSHBG00005010355) #30 PRLH (ENSSHBG00005010384) #31 RAB17 (ENSSHBG00005010406) #32 LRRFIP1 (ENSSHBG00005010455) #33 ENSSHBG00005010547 ENSSHBG00005010594 ENSSHBG00005010641 ZC3H15 (ENSSHBG00005010709) African ostrich MODERN SPECIES 1002 AGAP1 (ENSSCUG00000013642) #22 ENSSCUG00000013641 #23 IQCA1 (ENSSCUG00000013640) #25 ACKR3 (ENSSCUG00000013638) #26 COPS8 (ENSSCUG00000013636) #27 COL6A3 (ENSSCUG00000013629) #29 MLPH (ENSSCUG00000013624) #30 ENSSCUG00000013614 #33 ENSSCUG00000013610 UBE2F (ENSSCUG00000013609) #36 ENSSCUG00000013607 MREG (ENSSCUG00000013599) FN1 (ENSSCUG00000013570) ATIC (ENSSCUG00000013522) Australian saltwater crocodile MODERN SPECIES 66 ENSCPRG00005005331 ENSCPRG00005005355 NDUFA10 (ENSCPRG00005005367) HDAC4 (ENSCPRG00005005400) TWIST2 (ENSCPRG00005005461) ENSCPRG00005005465 ASB1 (ENSCPRG00005005514) TRAF3IP1 (ENSCPRG00005005553) ENSCPRG00005005577 USP40 (ENSCPRG00005005587) ENSCPRG00005005603 ##11 ARL4C (ENSCPRG00005005642) #19 SPP2 (ENSCPRG00005005661) #16 TRPM8 (ENSCPRG00005005682) #15 ENSCPRG00005005704 AGAP1 (ENSCPRG00005005814) #22 GBX2 (ENSCPRG00005005853) #23 ASB18 (ENSCPRG00005005897) #24 IQCA1 (ENSCPRG00005005928) #25 ACKR3 (ENSCPRG00005005948) #26 ENSCPRG00005005949 COPS8 (ENSCPRG00005005990) #27 COL6A3 (ENSCPRG00005006067) #29 MLPH (ENSCPRG00005006256) #30 PRLH (ENSCPRG00005006285) #31 RAB17 (ENSCPRG00005006290) #32 LRRFIP1 (ENSCPRG00005006318) #33 ENSCPRG00005006347 MCM3AP (ENSCPRG00005006390) YBEY (ENSCPRG00005006741) POFUT2 (ENSCPRG00005006796) Cryptodira ANCESTRAL SPECIES 5 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000163820 ENSGT00940000159677.c.a.b ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00940000156462.B ##29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00520000055666.b Testudinoidea ANCESTRAL SPECIES 11 ENSGT00720000108822 ENSGT00940000178952 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000163820.j ENSGT00940000163820.i ENSGT00940000159677.c.a.b ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00940000156462.B ##29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00520000055666.b Emydidae ANCESTRAL SPECIES 70 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000163820.j ENSGT00940000163820.i ENSGT00940000159677.c.a.b ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00940000156462.B ##29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00520000055666.b Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 80 ENSTMTG00000006134 ENSTMTG00000006198 #19 ENSTMTG00000006207 #16 ENSTMTG00000006243 #15 ENSTMTG00000006356 #15 ENSTMTG00000006383 #22 ENSTMTG00000006556 #23 ENSTMTG00000006575 #24 ENSTMTG00000006704 #25 ENSTMTG00000006807 #26 ENSTMTG00000006818 #27 ENSTMTG00000006841 #29 ENSTMTG00000006877 #29 ENSTMTG00000007184 #30 ENSTMTG00000007218 #30 ENSTMTG00000007250 #31 ENSTMTG00000007269 #32 ENSTMTG00000007303 #33 ENSTMTG00000007382 #33 Three-toed box turtle MODERN SPECIES 81 ENSTMTG00000007399 ENSTMTG00000007415 #19 ENSTMTG00000007423 #16 ENSTMTG00000007492 #15 ENSTMTG00000008118 #22 ENSTMTG00000008451 #23 ENSTMTG00000008470 #24 ENSTMTG00000008559 #25 ENSTMTG00000008595 #26 ENSTMTG00000008598 #27 ENSTMTG00000008620 #29 ENSTMTG00000008756 ##29 ENSTMTG00000008776 #30 ENSTMTG00000008817 #31 ENSTMTG00000008831 #32 ENSTMTG00000008868 #33 ENSTMTG00000008933 #33 ENSTMTG00000008957 ENSTMTG00000002998 ENSTMTG00000003011 #36 painted turtle MODERN SPECIES 808 ASB1 (ENSCPBG00000025369) TRAF3IP1 (ENSCPBG00000025359) ENSCPBG00000025339 ENSCPBG00000025323 ENSCPBG00000025316 ##11 ENSCPBG00000025306 ENSCPBG00000025303 ENSCPBG00000025299 ##11 ENSCPBG00000025298 ##11 ENSCPBG00000024851 ##11 SH3BP4 (ENSCPBG00000024719) #20 ARL4C (ENSCPBG00000024707) #19 ENSCPBG00000024701 ENSCPBG00000024691 #16 TRPM8 (ENSCPBG00000024488) #15 AGAP1 (ENSCPBG00000023256) #22 GBX2 (ENSCPBG00000022875) #23 ASB18 (ENSCPBG00000022867) #24 ENSCPBG00000022848 IQCA1 (ENSCPBG00000022820) #25 ACKR3 (ENSCPBG00000022793) #26 Testudinidae ANCESTRAL SPECIES 67 ENSGT00530000063273.b.b ENSGT00940000157267 ENSGT00940000159677.c.b.a.c.a ##11 ENSGT00940000163820.j.b ENSGT00940000163820.j.a ENSGT00940000163820.i ENSGT00940000159677.c.a.b ##11 ENSGT00940000159677.c.a.a ##11 ENSGT00940000159677.c.b.a.d ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00390000013151.a.a #20 ENSGT00950000185272 ENSGT00940000160639 #19 ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 Abingdon island giant tortoise MODERN SPECIES 2134 ENSCABG00000002606 #22 GBX2 (ENSCABG00000002605) #23 ASB18 (ENSCABG00000002604) #24 IQCA1 (ENSCABG00000002602) #25 ACKR3 (ENSCABG00000002601) #26 ENSCABG00000002600 COPS8 (ENSCABG00000002598) #27 ENSCABG00000002596 COL6A3 (ENSCABG00000002574) #29 ENSCABG00000002568 #30 ENSCABG00000002567 #30 ENSCABG00000002563 #31 Goode s thornscrub tortoise MODERN SPECIES 2 ENSGEVG00005017074 ENSGEVG00005017079 ENSGEVG00005017103 ENSGEVG00005017113 ENSGEVG00005004261 ENSGEVG00005004802 ENSGEVG00005004819 ENSGEVG00005004844 ENSGEVG00005004862 #31 ENSGEVG00005004939 ARL4C (ENSGEVG00005004953) #19 ENSGEVG00005004971 SPP2 (ENSGEVG00005004990) #16 ENSGEVG00005005129 #15 ENSGEVG00005005275 #15 AGAP1 (ENSGEVG00005005498) #22 GBX2 (ENSGEVG00005006397) #23 ASB18 (ENSGEVG00005006433) #24 IQCA1 (ENSGEVG00005006547) #25 ACKR3 (ENSGEVG00005006678) #26 COPS8 (ENSGEVG00005006688) #27 COL6A3 (ENSGEVG00005006817) #29 ENSGEVG00005007206 #30 ENSGEVG00005007229 #30 ENSGEVG00005007264 #31 ENSGEVG00005007320 SLC19A1 (ENSGEVG00005007576) ENSGEVG00005007621 ENSGEVG00005007665 ENSGEVG00005007725 ENSGEVG00005007782 Chinese turtle MODERN SPECIES 1375 HDAC4 (ENSPSIG00000018148) NDUFA10 (ENSPSIG00000018143) ENSPSIG00000018136 ENSPSIG00000001338 TRPM8 (ENSPSIG00000018097) #15 ENSPSIG00000001331 AGAP1 (ENSPSIG00000017950) #22 GBX2 (ENSPSIG00000017940) #23 ENSPSIG00000001316 ASB18 (ENSPSIG00000017927) #24 IQCA1 (ENSPSIG00000017781) #25 ACKR3 (ENSPSIG00000017761) #26 COPS8 (ENSPSIG00000017494) #27 COL6A3 (ENSPSIG00000017427) #29 MLPH (ENSPSIG00000017140) #30 PRLH (ENSPSIG00000017065) #31 RAB17 (ENSPSIG00000016995) #32 LRRFIP1 (ENSPSIG00000016774) #33 ENSPSIG00000016767 RAMP1 (ENSPSIG00000016764) UBE2F (ENSPSIG00000016759) #36 ENSPSIG00000016742 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000178952 ENSGT00940000159677.c.b.a.b ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000154349 #36 ENSGT00940000163794 ENSGT00390000008926 tuatara MODERN SPECIES 1003 ENSSPUG00000015810 ##22 ENSSPUG00000015820 #22 Episquamata ANCESTRAL SPECIES ENSGT00940000159224 ENSGT00940000165690 ENSGT00530000063564.b #33 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000159677.c.b.a.b ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00940000162768.B ENSGT00940000163601 ENSGT01030000235116 ENSGT00940000155682 ENSGT00390000005581.a ENSGT00520000055666.b Laterata ANCESTRAL SPECIES 13 ENSGT00940000159224 ENSGT00940000165690 ENSGT00530000063564.b #33 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000163820 ENSGT00940000159677.c.b.a.b ##11 ENSGT00940000159677.c.b.b ##11 ENSGT00940000159677.c.b.a.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00940000162768.B ENSGT00950000183546 ENSGT00940000181461 ENSGT00940000155682 ENSGT00390000005581.a ENSGT00520000055666.b Common wall lizard MODERN SPECIES FASTKD2 (ENSPMRG00000000149) KLF7 (ENSPMRG00000000188) CREB1 (ENSPMRG00000000233) METTL21A (ENSPMRG00000000269) ENSPMRG00000000296 ENSPMRG00000000317 ENSPMRG00000000354 PLEKHM3 (ENSPMRG00000000374) C2orf80 (ENSPMRG00000000402) IDH1 (ENSPMRG00000000420) PIKFYVE (ENSPMRG00000000782) PTH2R (ENSPMRG00000001701) ARL4C (ENSPMRG00000001763) #19 ENSPMRG00000001769 TRPM8 (ENSPMRG00000001779) #15 AGAP1 (ENSPMRG00000001831) #22 ENSPMRG00000001891 GBX2 (ENSPMRG00000001897) #23 ASB18 (ENSPMRG00000001902) #24 IQCA1 (ENSPMRG00000001911) #25 ENSPMRG00000001932 COPS8 (ENSPMRG00000001949) #27 MLPH (ENSPMRG00000001979) #30 ENSPMRG00000002010 RAB17 (ENSPMRG00000002014) #32 ENSPMRG00000002029 ENSPMRG00000002049 ENSPMRG00000002055 COL6A2 (ENSPMRG00000002061) FTCD (ENSPMRG00000002078) SPATC1L (ENSPMRG00000002088) Argentine black and white tegu MODERN SPECIES 12 ENSSMRG00000020849 ENSSMRG00000020850 ##11 ENSSMRG00000020851 ##11 ENSSMRG00000020852 ##11 ENSSMRG00000020868 ##11 ENSSMRG00000020941 ##11 ENSSMRG00000020942 ##11 ENSSMRG00000020943 ##11 ENSSMRG00000020945 ##11 ENSSMRG00000020946 ##11 SH3BP4 (ENSSMRG00000020950) #20 ENSSMRG00000020951 ARL4C (ENSSMRG00000020952) #19 ENSSMRG00000020954 #15 ENSSMRG00000020956 #15 AGAP1 (ENSSMRG00000020957) #22 GBX2 (ENSSMRG00000020958) #23 ASB18 (ENSSMRG00000020959) #24 IQCA1 (ENSSMRG00000020961) #25 ACKR3 (ENSSMRG00000020962) #26 COPS8 (ENSSMRG00000020967) #27 COL6A3 (ENSSMRG00000020968) #29 MLPH (ENSSMRG00000020969) #30 PRLH (ENSSMRG00000020970) #31 RAB17 (ENSSMRG00000020971) #32 ENSSMRG00000020972 ENSSMRG00000020973 ENSSMRG00000020974 COL6A2 (ENSSMRG00000020975) FTCD (ENSSMRG00000020977) SPATC1L (ENSSMRG00000020978) Toxicofera ANCESTRAL SPECIES ENSGT00940000154349 #36 ENSGT00940000159224 ENSGT00940000165690 ENSGT00530000063564.b #33 ENSGT00940000157440 ENSGT00940000165503 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000157267 ENSGT00940000159677.d #11 ENSGT00940000159677.c.b.a.a ##11 ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00940000161839 #32 ENSGT00940000162768.B ENSGT00940000163601 ENSGT01030000235116 ENSGT00940000155682 ENSGT00390000005581.a ENSGT00520000055666.b Lizard MODERN SPECIES PPIL3 (ENSACAG00000017026) NIF3L1 (ENSACAG00000017036) ENSACAG00000042635 ENSACAG00000008984 HDAC4 (ENSACAG00000009425) TWIST2 (ENSACAG00000009715) ASB1 (ENSACAG00000009718) TRAF3IP1 (ENSACAG00000009729) ENSACAG00000009760 ENSACAG00000022125 ##11 ENSACAG00000041540 #11 SH3BP4 (ENSACAG00000010071) #20 ENSACAG00000010087 #19 ENSACAG00000010093 #15 ENSACAG00000035836 #15 AGAP1 (ENSACAG00000010229) #22 GBX2 (ENSACAG00000010361) #23 ASB18 (ENSACAG00000010384) #24 IQCA1 (ENSACAG00000028076) #25 ACKR3 (ENSACAG00000010490) #26 COPS8 (ENSACAG00000010495) #27 PELI1 (ENSACAG00000040221) VPS54 (ENSACAG00000006033) UGP2 (ENSACAG00000005960) MDH1 (ENSACAG00000005865) ENSACAG00000005852 WDPCP (ENSACAG00000005832) OTX1 (ENSACAG00000005818) EHBP1 (ENSACAG00000005744) ENSACAG00000037825 ENSACAG00000037410 Elapidae ANCESTRAL SPECIES ENSGT00940000157295.g ENSGT00390000004553 ENSGT00940000155126 ENSGT00940000154349 #36 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000157440 ENSGT00940000165503 ENSGT00940000159677.c.b.b ##11 ENSGT00940000178952.b ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00970000197610.A ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00950000185272 ENSGT00940000162768.B ENSGT00940000163601 ENSGT01030000235116 ENSGT00940000155682 ENSGT00390000005581.a ENSGT00520000055666.b ENSGT00390000011570.t Indian cobra MODERN SPECIES ENSNNAG00000003847 ENSNNAG00000003837 ATIC (ENSNNAG00000017270) FN1 (ENSNNAG00000017132) UBE2F (ENSNNAG00000017117) #36 LRRFIP1 (ENSNNAG00000016996) #33 RAMP1 (ENSNNAG00000016973) HDAC4 (ENSNNAG00000016586) ENSNNAG00000016536 UGT1A1 (ENSNNAG00000016458) ##11 ENSNNAG00000016434 SH3BP4 (ENSNNAG00000016430) #20 ARL4C (ENSNNAG00000016424) #19 TRPM8 (ENSNNAG00000014583) #15 ENSNNAG00000014442 ENSNNAG00000013714 #22 GBX2 (ENSNNAG00000013633) #23 IQCA1 (ENSNNAG00000013491) #25 ACKR3 (ENSNNAG00000013475) #26 COPS8 (ENSNNAG00000013456) #27 COL6A3 (ENSNNAG00000013218) #29 MLPH (ENSNNAG00000013124) #30 ENSNNAG00000013103 ENSNNAG00000013062 ENSNNAG00000012914 COL6A2 (ENSNNAG00000012890) FTCD (ENSNNAG00000012835) SPATC1L (ENSNNAG00000012819) LSS (ENSNNAG00000010089) MCM3AP (ENSNNAG00000009601) YBEY (ENSNNAG00000009555) Elapidae_a ANCESTRAL SPECIES 39 ENSGT00940000157295.g ENSGT00390000004553 ENSGT00940000155126 ENSGT00940000154349 #36 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000157440 ENSGT00940000165503 ENSGT00940000159677.c.b.b.c ##11 ENSGT00940000178952.b ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00970000197610.A ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00950000185272 ENSGT00940000162768.B ENSGT00940000163601 ENSGT01030000235116 ENSGT00940000155682 ENSGT00390000005581.a ENSGT00520000055666.b ENSGT00390000011570.t Blue-lipped sea krait MODERN SPECIES 8805 ENSLLTG00000016987 #22 Acanthophiinae ANCESTRAL SPECIES 39 ENSGT00940000157295.g ENSGT00390000004553 ENSGT00940000155126 ENSGT00940000154349 #36 ENSGT00530000063564.b #33 ENSGT00940000165690 ENSGT00940000159224 ENSGT00940000157440 ENSGT00940000165503 ENSGT00940000159677.c.b.b.c ##11 ENSGT00940000178952.b ENSGT00390000013151.a.a #20 ENSGT00940000160639 #19 ENSGT00940000160270 #15 ENSGT00970000197610.A ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489.a #31 ENSGT00950000185272 ENSGT00940000162768.B ENSGT00940000163601 ENSGT01030000235116 ENSGT00940000155682 ENSGT00390000005581.a ENSGT00520000055666.b ENSGT00390000011570.t Eastern brown snake MODERN SPECIES 36 ABCA12 (ENSPTXG00000007148) ATIC (ENSPTXG00000007147) ENSPTXG00000007146 FN1 (ENSPTXG00000007144) UBE2F (ENSPTXG00000007143) #36 LRRFIP1 (ENSPTXG00000007138) #33 RAMP1 (ENSPTXG00000007137) HDAC4 (ENSPTXG00000006466) ENSPTXG00000006459 UGT1A1 (ENSPTXG00000006248) ##11 ENSPTXG00000006247 SH3BP4 (ENSPTXG00000006246) #20 ARL4C (ENSPTXG00000006245) #19 TRPM8 (ENSPTXG00000003411) #15 ENSPTXG00000003401 AGAP1 (ENSPTXG00000000614) #22 GBX2 (ENSPTXG00000000408) #23 ENSPTXG00000000405 IQCA1 (ENSPTXG00000000336) #25 ACKR3 (ENSPTXG00000000332) #26 COPS8 (ENSPTXG00000000311) #27 COL6A3 (ENSPTXG00000000271) #29 ENSPTXG00000000246 ENSPTXG00000000237 ##30 ENSPTXG00000000211 ENSPTXG00000000194 ENSPTXG00000000142 ENSPTXG00000003775 COL6A2 (ENSPTXG00000003773) FTCD (ENSPTXG00000003772) SPATC1L (ENSPTXG00000003771) Mainland tiger snake MODERN SPECIES 110 ENSNSUG00000012728 ##11 ENSNSUG00000012729 SH3BP4 (ENSNSUG00000012730) #20 ARL4C (ENSNSUG00000012731) #19 ENSNSUG00000012732 #15 ENSNSUG00000012799 #15 AGAP1 (ENSNSUG00000012806) #22 GBX2 (ENSNSUG00000012809) #23 IQCA1 (ENSNSUG00000012810) #25 ENSNSUG00000012811 ACKR3 (ENSNSUG00000012812) #26 COPS8 (ENSNSUG00000012813) #27 ENSNSUG00000012830 #29 ENSNSUG00000012831 #29 MLPH (ENSNSUG00000012832) #30 PRLH (ENSNSUG00000012876) #31 ENSNSUG00000012877 ENSNSUG00000012878 ENSNSUG00000012881 COL6A2 (ENSNSUG00000012883) FTCD (ENSNSUG00000012884) ENSNSUG00000012885 Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Sauria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Archelosauria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Cryptodira ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Testudinidae ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Abingdon island giant tortoise MODERN SPECIES 594 ENSCABG00000002350 ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 tuatara MODERN SPECIES 1003 ENSSPUG00000015810 ##22 ENSSPUG00000015820 #22 Mammalia ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Theria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Primates ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Macaca ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000157267 ENSGT00940000166673.d.a.a.a.a.b ENSGT00940000162757.f #10 ENSGT00940000159677.d #11 ENSGT00940000161309 #12 ENSGT00390000005575 #14 ENSGT00950000182965.b.eb.a ENSGT00940000160270 #15 ENSGT00390000009001 #16 ENSGT00940000161627.a.a.a.b.b.b.a.a.b.c.a.b ENSGT01080000257484.C ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.a.a.b.a.a.a.a ENSGT01100000263539.b.a.a.a.a.a.a.a.b.b.b.a.b.a.a.a ENSGT00940000154793.C.`b.a ##22 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT00390000000977 #27 ENSGT00910000147210 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b.e.a #33 ENSGT00390000016508 #34 ENSGT00940000159224 ENSGT00940000154349.m.a.c #36 Crab-eating macaque MODERN SPECIES 3 USP40 (ENSMFAG00000036495) UGT1A8 (ENSMFAG00000042349) #11 ENSMFAG00000056186 ENSMFAG00000039060 #10 MROH2A (ENSMFAG00000045490) #12 HJURP (ENSMFAG00000000886) #14 ENSMFAG00000050196 TRPM8 (ENSMFAG00000043208) #15 SPP2 (ENSMFAG00000044433) #16 ENSMFAG00000062028 ENSMFAG00000049398 ENSMFAG00000045232 #19 SH3BP4 (ENSMFAG00000038422) #20 ENSMFAG00000062617 ENSMFAG00000056989 ENSMFAG00000050981 ##22 ENSMFAG00000038629 #22 GBX2 (ENSMFAG00000031863) #23 ASB18 (ENSMFAG00000042948) #24 IQCA1 (ENSMFAG00000046217) #25 ACKR3 (ENSMFAG00000029542) #26 COPS8 (ENSMFAG00000043944) #27 ENSMFAG00000030220 COL6A3 (ENSMFAG00000043048) #29 MLPH (ENSMFAG00000040090) #30 PRLH (ENSMFAG00000043339) #31 RAB17 (ENSMFAG00000036950) #32 ENSMFAG00000035972 #33 RBM44 (ENSMFAG00000002416) #34 RAMP1 (ENSMFAG00000032812) ENSMFAG00000035899 #36 Marsupialia ANCESTRAL SPECIES 31 ENSGT00940000161997.a ENSGT00390000009001 #16 ENSGT00940000160270 #15 ENSGT00940000159677.d #11 ENSGT00940000163820 ENSGT00940000163976 ENSGT00940000157267 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000156322.g ENSGT00940000154793.C.`b.a ##22 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT01100000263477.A.b.a.a.a.a.a.b.b ENSGT01100000263477.A.b.a.a.a.a.b ENSGT01100000263477.A.b.a.a.a.a.a.a ENSGT00390000000977 #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000160270 #15 ENSGT00940000159677.d #11 ENSGT00940000163820 ENSGT00940000163976 ENSGT00940000157267 ENSGT00390000016151 ENSGT00940000157440 ENSGT00940000161996 ENSGT00940000153969.b ENSGT00720000108822 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000160639 #19 ENSGT00390000013151.a.a #20 ENSGT00940000156322.g ENSGT00940000154793.C.`b.a ##22 ENSGT00940000154793.C.ab #22 ENSGT00940000154365.a.b #23 ENSGT00940000162056 #24 ENSGT00940000154067.c #25 ENSGT01090000260051.b.b #26 ENSGT01100000263477.A.b.a.a.a.a.a.b.b ENSGT01100000263477.A.b.a.a.a.a.b ENSGT01100000263477.A.b.a.a.a.a.a.a.b ENSGT00390000000977.b #27 ENSGT00940000156462.C #29 ENSGT00950000183138.a.b.a #30 ENSGT00390000005489 #31 ENSGT00940000161839 #32 ENSGT00530000063564.b #33 ENSGT00390000016508 #34 Diprotodontia ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000154793.C.`b.a ##22 Common wonbat MODERN SPECIES 787 TWIST2 (ENSVURG00010010490) ASB1 (ENSVURG00010010493) ENSVURG00010010502 ENSVURG00010010534 ENSVURG00010010536 ENSVURG00010010549 ENSVURG00010010564 ARL4C (ENSVURG00010010587) #19 SH3BP4 (ENSVURG00010010594) #20 ENSVURG00010010609 ##22 ENSVURG00010010616 #22 GBX2 (ENSVURG00010010623) #23 ASB18 (ENSVURG00010010631) #24 IQCA1 (ENSVURG00010010657) #25 ENSVURG00010010702 ACKR3 (ENSVURG00010010709) #26 ENSVURG00010010721 Amniota ANCESTRAL SPECIES ENSGT00940000154793.C.`b.b ##22 Sauria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.b ##22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000154793.C.`b.b ##22 tuatara MODERN SPECIES 1357 ENSSPUG00000014394 ##22