Vertebrata	ANCESTRAL SPECIES	154															ENSGT00390000005222 #15	ENSGT00940000159628 #22	ENSGT00940000155971 #23
Gnathostomata	ANCESTRAL SPECIES	356									ENSGT00390000005855 #18	ENSGT00390000000453 #17	ENSGT00950000182844.b.b.b #16	ENSGT00390000005222 #15	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23
Euteleostomi	ANCESTRAL SPECIES	126	ENSGT00940000160936 #32	ENSGT00940000155645 #28	ENSGT00390000015400 #27	ENSGT00390000016068 #26	ENSGT00390000005224	ENSGT00940000177011	ENSGT00940000159749 #14	ENSGT00390000005855 #18	ENSGT00390000000453 #17	ENSGT00950000182844.b.b.b #16	ENSGT00390000005222 #15	ENSGT00940000160026 #19	ENSGT00940000164526	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23
Sarcopterygii	ANCESTRAL SPECIES	327						ENSGT00940000177011	ENSGT00940000159749 #14	ENSGT00390000005855 #18	ENSGT00390000000453 #17	ENSGT00950000182844.b.b.b #16	ENSGT00390000005222 #15	ENSGT00940000160026 #19	ENSGT00940000164526	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23
Tetrapoda	ANCESTRAL SPECIES	11			ENSGT00530000063712.a.a #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005855 #18	ENSGT00390000000453 #17	ENSGT00950000182844.b.b.b #16	ENSGT00390000005222 #15	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT00950000183112.a
Amniota	ANCESTRAL SPECIES	15			ENSGT00530000063712.a.a #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Mammalia	ANCESTRAL SPECIES	45	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Theria	ANCESTRAL SPECIES	22	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000177011	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Eutheria	ANCESTRAL SPECIES	8	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Glires	ANCESTRAL SPECIES	15	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Myomorpha	ANCESTRAL SPECIES	13	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Muroidea	ANCESTRAL SPECIES	12	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Cricetidae_B	ANCESTRAL SPECIES	33	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Northern American deer mouse	MODERN SPECIES		Ap3s2 (ENSPEMG00000013394) #7	Anpep (ENSPEMG00000016532) #8	Mesp2 (ENSPEMG00000014325) #9	Mesp1 (ENSPEMG00000025923) #10	Wdr93 (ENSPEMG00000013841) #11	Pex11a (ENSPEMG00000009547) #12	Plin1 (ENSPEMG00000018097) #13	Kif7 (ENSPEMG00000011551) #14	Ticrr (ENSPEMG00000017591) #15	Rhcg (ENSPEMG00000017207) #16	Polg (ENSPEMG00000015138) #17	Fanci (ENSPEMG00000023214) #18	Rlbp1 (ENSPEMG00000010592) #19	Abhd2 (ENSPEMG00000016881) #20	Mfge8 (ENSPEMG00000018759) #21	Hapln3 (ENSPEMG00000016074) #22	Acan (ENSPEMG00000018677) #23	ENSPEMG00000020302 #24	Aen (ENSPEMG00000020445) #25	Mrps11 (ENSPEMG00000012996) #26	Mrpl46 (ENSPEMG00000018885) #27	Ntrk3 (ENSPEMG00000010258) #28	ENSPEMG00000025464 #29	ENSPEMG00000028078 #30	ENSPEMG00000024886 #31	Agbl1 (ENSPEMG00000012489) #32	Klhl25 (ENSPEMG00000020845) #33	Akap13 (ENSPEMG00000008191) #34	Sv2b (ENSPEMG00000003875) #35	Slco3a1 (ENSPEMG00000019635) #36	St8sia2 (ENSPEMG00000030066) #37
Prairie vole	MODERN SPECIES	9	Anpep (ENSMOCG00000000396) #8	Mesp2 (ENSMOCG00000000232) #9	Mesp1 (ENSMOCG00000000607) #10	Wdr93 (ENSMOCG00000008278) #11	Pex11a (ENSMOCG00000010626) #12	ENSMOCG00000012406 #13	Kif7 (ENSMOCG00000001711) #14	ENSMOCG00000012109	Ticrr (ENSMOCG00000017017) #15	Rhcg (ENSMOCG00000022826) #16	Polg (ENSMOCG00000010126) #17	Fanci (ENSMOCG00000021654) #18	Rlbp1 (ENSMOCG00000014725) #19	Abhd2 (ENSMOCG00000017256) #20	Mfge8 (ENSMOCG00000022259) #21	Hapln3 (ENSMOCG00000002702) #22	Acan (ENSMOCG00000002876) #23	ENSMOCG00000005940 #24	Aen (ENSMOCG00000011735) #25	Det1 (ENSMOCG00000015559)	Mrps11 (ENSMOCG00000020525) #26	Mrpl46 (ENSMOCG00000012649) #27	Ntrk3 (ENSMOCG00000013899) #28	Agbl1 (ENSMOCG00000022831) #32	ENSMOCG00000010673	Klhl25 (ENSMOCG00000020306) #33	Akap13 (ENSMOCG00000017130) #34	Sv2b (ENSMOCG00000000304) #35	Slco3a1 (ENSMOCG00000017386) #36	St8sia2 (ENSMOCG00000007781) #37	Fam174b (ENSMOCG00000014947)
Cricetinae	ANCESTRAL SPECIES	15	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l.a #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Chinese hamster chok1gshd	MODERN SPECIES	101	Anpep (ENSCGRG00001016244) #8	Mesp2 (ENSCGRG00001015018) #9	Mesp1 (ENSCGRG00001014587) #10	Wdr93 (ENSCGRG00001000336) #11	Pex11a (ENSCGRG00001017053) #12	Plin1 (ENSCGRG00001013432) #13	ENSCGRG00001011724	Kif7 (ENSCGRG00001015583) #14	Ticrr (ENSCGRG00001012535) #15	Rhcg (ENSCGRG00001023258) #16	Polg (ENSCGRG00001017862) #17	Fanci (ENSCGRG00001020390) #18	Rlbp1 (ENSCGRG00001013382) #19	Abhd2 (ENSCGRG00001001929) #20	Mfge8 (ENSCGRG00001011973) #21	Hapln3 (ENSCGRG00001007307) #22	Acan (ENSCGRG00001025035) #23	ENSCGRG00001003840	ENSCGRG00001016300 #24	Aen (ENSCGRG00001021559) #25	Det1 (ENSCGRG00001015151)	Mrps11 (ENSCGRG00001012765) #26	Mrpl46 (ENSCGRG00001001727) #27	Ntrk3 (ENSCGRG00001021632) #28	Agbl1 (ENSCGRG00001015401) #32	Klhl25 (ENSCGRG00001012399) #33	Akap13 (ENSCGRG00001014312) #34	ENSCGRG00001008980	ENSCGRG00001000354	ENSCGRG00001024289	Sv2b (ENSCGRG00001019863) #35
Golden Hamster	MODERN SPECIES	693	Anpep (ENSMAUG00000010717) #8	ENSMAUG00000003641 #10	Wdr93 (ENSMAUG00000011463) #11	Pex11a (ENSMAUG00000016721) #12	ENSMAUG00000008691 #13	Kif7 (ENSMAUG00000012171) #14	Ticrr (ENSMAUG00000017732) #15	Rhcg (ENSMAUG00000002938) #16	ENSMAUG00000016933	ENSMAUG00000019060 #17	ENSMAUG00000017797 #17	Fanci (ENSMAUG00000019957) #18	Rlbp1 (ENSMAUG00000012835) #19	Abhd2 (ENSMAUG00000000130) #20	Mfge8 (ENSMAUG00000014827) #21	Hapln3 (ENSMAUG00000010361) #22	Acan (ENSMAUG00000013316) #23	ENSMAUG00000015001 #24	Aen (ENSMAUG00000000489) #25	Det1 (ENSMAUG00000010416)	Mrps11 (ENSMAUG00000006622) #26	Mrpl46 (ENSMAUG00000009443) #27	Ntrk3 (ENSMAUG00000001788) #28	Agbl1 (ENSMAUG00000009041) #32	Klhl25 (ENSMAUG00000016695) #33	Akap13 (ENSMAUG00000012090) #34	Sv2b (ENSMAUG00000013525) #35
Murinae	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00960000191040
Mus	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Mouse	MODERN SPECIES	16	Ap3s2 (ENSMUSG00000063801) #7	Anpep (ENSMUSG00000039062) #8	Mesp2 (ENSMUSG00000030543) #9	Mesp1 (ENSMUSG00000030544) #10	Wdr93 (ENSMUSG00000039099) #11	Pex11a (ENSMUSG00000030545) #12	Plin1 (ENSMUSG00000030546) #13	Kif7 (ENSMUSG00000050382) #14	Ticrr (ENSMUSG00000046591) #15	Rhcg (ENSMUSG00000030549) #16	Polg (ENSMUSG00000039176) #17	Fanci (ENSMUSG00000039187) #18	Rlbp1 (ENSMUSG00000039194) #19	Abhd2 (ENSMUSG00000039202) #20	Mfge8 (ENSMUSG00000030605) #21	Hapln3 (ENSMUSG00000030606) #22	Acan (ENSMUSG00000030607) #23	Isg20 (ENSMUSG00000039236) #24	Aen (ENSMUSG00000030609) #25	Det1 (ENSMUSG00000030610)	Mrps11 (ENSMUSG00000030611) #26	Mrpl46 (ENSMUSG00000030612) #27	Ntrk3 (ENSMUSG00000059146) #28	Agbl1 (ENSMUSG00000025754) #32	Klhl25 (ENSMUSG00000055652) #33	Akap13 (ENSMUSG00000066406) #34	Sv2b (ENSMUSG00000053025) #35	Slco3a1 (ENSMUSG00000025790) #36	St8sia2 (ENSMUSG00000025789) #37	Fam174b (ENSMUSG00000078670)	Chd2 (ENSMUSG00000078671)
Mus_C	ANCESTRAL SPECIES	13	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT01030000235343
Steppe mouse	MODERN SPECIES	3233	Mesp2 (ENSMSIG00000017881) #9	Mesp1 (ENSMSIG00000017895) #10	Wdr93 (ENSMSIG00000017904) #11	ENSMSIG00000017963 #12	Plin1 (ENSMSIG00000017980) #13	Kif7 (ENSMSIG00000018055) #14	ENSMSIG00000018144	Ticrr (ENSMSIG00000018150) #15	ENSMSIG00000018179 #16	ENSMSIG00000018236	Polg (ENSMSIG00000018239) #17	Fanci (ENSMSIG00000018281) #18	Rlbp1 (ENSMSIG00000018394) #19	Abhd2 (ENSMSIG00000018413) #20	Mfge8 (ENSMSIG00000018457) #21	Hapln3 (ENSMSIG00000018507) #22	Acan (ENSMSIG00000018528) #23	ENSMSIG00000018559 #24	Aen (ENSMSIG00000018598) #25	Det1 (ENSMSIG00000018625)	Mrps11 (ENSMSIG00000018657) #26	Mrpl46 (ENSMSIG00000018674) #27	Ntrk3 (ENSMSIG00000018687) #28
spretus	MODERN SPECIES	16	Ap3s2 (MGP_SPRETEiJ_G0030992) #7	MGP_SPRETEiJ_G0030991 #8	Mesp2 (MGP_SPRETEiJ_G0030990) #9	Mesp1 (MGP_SPRETEiJ_G0030989) #10	Wdr93 (MGP_SPRETEiJ_G0030988) #11	Pex11a (MGP_SPRETEiJ_G0030987) #12	Plin1 (MGP_SPRETEiJ_G0030986) #13	Kif7 (MGP_SPRETEiJ_G0030985) #14	Ticrr (MGP_SPRETEiJ_G0030984) #15	Rhcg (MGP_SPRETEiJ_G0030983) #16	Polg (MGP_SPRETEiJ_G0030982) #17	Fanci (MGP_SPRETEiJ_G0030981) #18	Rlbp1 (MGP_SPRETEiJ_G0030980) #19	Abhd2 (MGP_SPRETEiJ_G0030979) #20	Mfge8 (MGP_SPRETEiJ_G0030978) #21	Hapln3 (MGP_SPRETEiJ_G0030977) #22	Acan (MGP_SPRETEiJ_G0030976) #23	MGP_SPRETEiJ_G0030975 #24	MGP_SPRETEiJ_G0030974 #25	MGP_SPRETEiJ_G0030973	Mrps11 (MGP_SPRETEiJ_G0030972) #26	Mrpl46 (MGP_SPRETEiJ_G0030971) #27	Ntrk3 (MGP_SPRETEiJ_G0030970) #28	Agbl1 (MGP_SPRETEiJ_G0030969) #32	Akap13 (MGP_SPRETEiJ_G0030967) #34	Sv2b (MGP_SPRETEiJ_G0030966) #35	Slco3a1 (MGP_SPRETEiJ_G0030965) #36	St8sia2 (MGP_SPRETEiJ_G0030964) #37	Fam174b (MGP_SPRETEiJ_G0030963)	Chd2 (MGP_SPRETEiJ_G0030962)	Rgma (MGP_SPRETEiJ_G0030961)
Ryukyu mouse	MODERN SPECIES	16	Ap3s2 (MGP_CAROLIEiJ_G0029890) #7	Anpep (MGP_CAROLIEiJ_G0029889) #8	Mesp2 (MGP_CAROLIEiJ_G0029888) #9	Mesp1 (MGP_CAROLIEiJ_G0029887) #10	Wdr93 (MGP_CAROLIEiJ_G0029886) #11	Pex11a (MGP_CAROLIEiJ_G0029885) #12	Plin1 (MGP_CAROLIEiJ_G0029884) #13	Kif7 (MGP_CAROLIEiJ_G0029883) #14	Ticrr (MGP_CAROLIEiJ_G0029882) #15	Rhcg (MGP_CAROLIEiJ_G0029881) #16	Polg (MGP_CAROLIEiJ_G0029880) #17	Fanci (MGP_CAROLIEiJ_G0029879) #18	Rlbp1 (MGP_CAROLIEiJ_G0029878) #19	Abhd2 (MGP_CAROLIEiJ_G0029877) #20	Mfge8 (MGP_CAROLIEiJ_G0029876) #21	Hapln3 (MGP_CAROLIEiJ_G0029875) #22	Acan (MGP_CAROLIEiJ_G0029874) #23	MGP_CAROLIEiJ_G0029873 #24	Aen (MGP_CAROLIEiJ_G0029872) #25	Det1 (MGP_CAROLIEiJ_G0029871)	Mrps11 (MGP_CAROLIEiJ_G0029870) #26	Mrpl46 (MGP_CAROLIEiJ_G0029869) #27	Ntrk3 (MGP_CAROLIEiJ_G0029868) #28	Agbl1 (MGP_CAROLIEiJ_G0029867) #32	Klhl25 (MGP_CAROLIEiJ_G0029866) #33	Akap13 (MGP_CAROLIEiJ_G0029865) #34	Sv2b (MGP_CAROLIEiJ_G0029864) #35	Slco3a1 (MGP_CAROLIEiJ_G0029863) #36	St8sia2 (MGP_CAROLIEiJ_G0029862) #37	Fam174b (MGP_CAROLIEiJ_G0029861)	Chd2 (MGP_CAROLIEiJ_G0029860)
Shrew mouse	MODERN SPECIES		Ap3s2 (MGP_PahariEiJ_G0013112) #7	Anpep (MGP_PahariEiJ_G0013111) #8	Mesp2 (MGP_PahariEiJ_G0013110) #9	Mesp1 (MGP_PahariEiJ_G0013109) #10	Wdr93 (MGP_PahariEiJ_G0013108) #11	Pex11a (MGP_PahariEiJ_G0013107) #12	Plin1 (MGP_PahariEiJ_G0013106) #13	Kif7 (MGP_PahariEiJ_G0013105) #14	Ticrr (MGP_PahariEiJ_G0013104) #15	Rhcg (MGP_PahariEiJ_G0013103) #16	Polg (MGP_PahariEiJ_G0013102) #17	Fanci (MGP_PahariEiJ_G0013101) #18	Rlbp1 (MGP_PahariEiJ_G0013100) #19	Abhd2 (MGP_PahariEiJ_G0013099) #20	Mfge8 (MGP_PahariEiJ_G0013098) #21	Hapln3 (MGP_PahariEiJ_G0013097) #22	Acan (MGP_PahariEiJ_G0013096) #23	MGP_PahariEiJ_G0013095 #24	Aen (MGP_PahariEiJ_G0013094) #25	Det1 (MGP_PahariEiJ_G0013093)	Mrps11 (MGP_PahariEiJ_G0013092) #26	Mrpl46 (MGP_PahariEiJ_G0013091) #27	Ntrk3 (MGP_PahariEiJ_G0013090) #28	MGP_PahariEiJ_G0013089 #32	Klhl25 (MGP_PahariEiJ_G0013088) #33	Akap13 (MGP_PahariEiJ_G0013087) #34	Sv2b (MGP_PahariEiJ_G0013086) #35	Slco3a1 (MGP_PahariEiJ_G0013085) #36	St8sia2 (MGP_PahariEiJ_G0013084) #37	Fam174b (MGP_PahariEiJ_G0013083)	Chd2 (MGP_PahariEiJ_G0013082)
Rat	MODERN SPECIES		Wdr93 (ENSRNOG00000026514) #11	Pex11a (ENSRNOG00000015003) #12	Plin1 (ENSRNOG00000015086) #13	LOC120099868 (ENSRNOG00000070288)	Kif7 (ENSRNOG00000026857) #14	Ticrr (ENSRNOG00000015520) #15	Rhcg (ENSRNOG00000015526) #16	Atp5mpl-ps1 (ENSRNOG00000070574)	LOC685596 (ENSRNOG00000032204)	ENSRNOG00000069120	Polg (ENSRNOG00000032293) #17	Fanci (ENSRNOG00000016689) #18	Rlbp1 (ENSRNOG00000016897) #19	Abhd2 (ENSRNOG00000017120) #20	Mfge8 (ENSRNOG00000017510) #21	Hapln3 (ENSRNOG00000022321) #22	Acan (ENSRNOG00000028992) #23	Aen (ENSRNOG00000018421) #25	Isg20 (ENSRNOG00000054561) #24	Det1 (ENSRNOG00000018515)	Mrpl46 (ENSRNOG00000018547) #27	Mrps11 (ENSRNOG00000018531) #26	ENSRNOG00000067190	Ntrk3 (ENSRNOG00000018674) #28	Agbl1 (ENSRNOG00000022610) #32	Klhl25 (ENSRNOG00000010959) #33	LOC103691165 (ENSRNOG00000065273)	Akap13 (ENSRNOG00000010964) #34	Sv2b (ENSRNOG00000011160) #35	Slco3a1 (ENSRNOG00000032798) #36	LOC100360396 (ENSRNOG00000051333)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1645	Mesp2 (ENSNGAG00000000375) #9	Mesp1 (ENSNGAG00000010748) #10	Wdr93 (ENSNGAG00000016076) #11	Pex11a (ENSNGAG00000014804) #12	ENSNGAG00000018874 #13	Kif7 (ENSNGAG00000000476) #14	ENSNGAG00000017581	ENSNGAG00000020172 #15	Rhcg (ENSNGAG00000016159) #16	ENSNGAG00000000264 #17	ENSNGAG00000003596 #17	Fanci (ENSNGAG00000013177) #18	Rlbp1 (ENSNGAG00000018946) #19	Abhd2 (ENSNGAG00000011822) #20	Mfge8 (ENSNGAG00000019205) #21	Hapln3 (ENSNGAG00000013619) #22	Acan (ENSNGAG00000006255) #23	ENSNGAG00000019782 #24	Aen (ENSNGAG00000011590) #25	Det1 (ENSNGAG00000006108)	Mrps11 (ENSNGAG00000010433) #26	Mrpl46 (ENSNGAG00000015215) #27	Ntrk3 (ENSNGAG00000009651) #28
Lesser Egyptian jerboa	MODERN SPECIES	65	Ap3s2 (ENSJJAG00000022334) #7	Anpep (ENSJJAG00000022111) #8	Mesp2 (ENSJJAG00000007842) #9	Mesp1 (ENSJJAG00000024239) #10	Wdr93 (ENSJJAG00000000817) #11	Pex11a (ENSJJAG00000014156) #12	Plin1 (ENSJJAG00000020632) #13	Kif7 (ENSJJAG00000019257) #14	Ticrr (ENSJJAG00000019079) #15	Rhcg (ENSJJAG00000014003) #16	Polg (ENSJJAG00000020236) #17	Fanci (ENSJJAG00000017556) #18	Rlbp1 (ENSJJAG00000019859) #19	ENSJJAG00000014710 #20	Mfge8 (ENSJJAG00000021191) #21	Hapln3 (ENSJJAG00000003756) #22	ENSJJAG00000014405 #23	ENSJJAG00000010531 #24	ENSJJAG00000022647 #25	Det1 (ENSJJAG00000018927)	Mrps11 (ENSJJAG00000000570) #26	ENSJJAG00000003742 #27	Ntrk3 (ENSJJAG00000015374) #28	ENSJJAG00000003857	ENSJJAG00000017117	Agbl1 (ENSJJAG00000023061) #32	Klhl25 (ENSJJAG00000003518) #33	ENSJJAG00000022612 #34	Sv2b (ENSJJAG00000023324) #35	Slco3a1 (ENSJJAG00000014694) #36	St8sia2 (ENSJJAG00000012574) #37
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Hystricomorpha	ANCESTRAL SPECIES	40	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Hystricomorpha_a	ANCESTRAL SPECIES	25	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Hystricomorpha_b	ANCESTRAL SPECIES	20	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Degu	MODERN SPECIES	43	AP3S2 (ENSODEG00000015043) #7	ANPEP (ENSODEG00000016223) #8	MESP2 (ENSODEG00000014775) #9	WDR93 (ENSODEG00000015944) #11	PEX11A (ENSODEG00000015268) #12	PLIN1 (ENSODEG00000015512) #13	KIF7 (ENSODEG00000015309) #14	TICRR (ENSODEG00000015070) #15	RHCG (ENSODEG00000015101) #16	ENSODEG00000015778 #17	ENSODEG00000015280 #17	FANCI (ENSODEG00000016230) #18	RLBP1 (ENSODEG00000014477) #19	ABHD2 (ENSODEG00000015473) #20	MFGE8 (ENSODEG00000014861) #21	HAPLN3 (ENSODEG00000014578) #22	ENSODEG00000015131 #23	ISG20 (ENSODEG00000015032) #24	ENSODEG00000015278 #25	DET1 (ENSODEG00000015080)	ENSODEG00000020339	MRPS11 (ENSODEG00000014618) #26	MRPL46 (ENSODEG00000015622) #27	NTRK3 (ENSODEG00000014845) #28	ENSODEG00000015306	AGBL1 (ENSODEG00000015086) #32	KLHL25 (ENSODEG00000020418) #33	ENSODEG00000014809 #34	SV2B (ENSODEG00000014483) #35	SLCO3A1 (ENSODEG00000014776) #36	ST8SIA2 (ENSODEG00000014941) #37
Long-tailed chinchilla	MODERN SPECIES	123	AP3S2 (ENSCLAG00000009062) #7	ANPEP (ENSCLAG00000015432) #8	ENSCLAG00000012204 #9	WDR93 (ENSCLAG00000010252) #11	PEX11A (ENSCLAG00000008620) #12	PLIN1 (ENSCLAG00000012336) #13	KIF7 (ENSCLAG00000013987) #14	TICRR (ENSCLAG00000015621) #15	RHCG (ENSCLAG00000011593) #16	POLG (ENSCLAG00000009374) #17	FANCI (ENSCLAG00000009777) #18	ENSCLAG00000009718	RLBP1 (ENSCLAG00000010583) #19	ABHD2 (ENSCLAG00000014471) #20	MFGE8 (ENSCLAG00000009989) #21	HAPLN3 (ENSCLAG00000010136) #22	ENSCLAG00000010954 #23	ISG20 (ENSCLAG00000008100) #24	AEN (ENSCLAG00000008791) #25	DET1 (ENSCLAG00000007938)	MRPS11 (ENSCLAG00000017346) #26	MRPL46 (ENSCLAG00000017048) #27	NTRK3 (ENSCLAG00000013822) #28	AGBL1 (ENSCLAG00000014777) #32	KLHL25 (ENSCLAG00000012252) #33	AKAP13 (ENSCLAG00000009112) #34	ENSCLAG00000012777	SV2B (ENSCLAG00000011664) #35	SLCO3A1 (ENSCLAG00000012887) #36	ST8SIA2 (ENSCLAG00000017062) #37	FAM174B (ENSCLAG00000017030)
Guinea pig	MODERN SPECIES	10	ZNF710 (ENSCPOG00000003532)	ARPIN (ENSCPOG00000039273)	AP3S2 (ENSCPOG00000020164) #7	ANPEP (ENSCPOG00000002499) #8	MESP2 (ENSCPOG00000019717) #9	ENSCPOG00000031280 #11	PEX11A (ENSCPOG00000032343) #12	PLIN1 (ENSCPOG00000009674) #13	KIF7 (ENSCPOG00000015371) #14	RHCG (ENSCPOG00000009033) #16	POLG (ENSCPOG00000007266) #17	FANCI (ENSCPOG00000007259) #18	RLBP1 (ENSCPOG00000009639) #19	ABHD2 (ENSCPOG00000033305) #20	MFGE8 (ENSCPOG00000003673) #21	HAPLN3 (ENSCPOG00000037553) #22	ACAN (ENSCPOG00000008837) #23	ISG20 (ENSCPOG00000036489) #24	AEN (ENSCPOG00000021693) #25	DET1 (ENSCPOG00000014493)	MRPS11 (ENSCPOG00000014489) #26	MRPL46 (ENSCPOG00000040189) #27	NTRK3 (ENSCPOG00000009727) #28	AGBL1 (ENSCPOG00000001605) #32	KLHL25 (ENSCPOG00000013099) #33	ENSCPOG00000013090 #34	SV2B (ENSCPOG00000008032) #35	SLCO3A1 (ENSCPOG00000010758) #36	ST8SIA2 (ENSCPOG00000032324) #37	CHD2 (ENSCPOG00000005800)	RGMA (ENSCPOG00000039106)
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000000348	IDH2 (ENSHGLG00000008310)	ENSHGLG00000049498	ARPIN (ENSHGLG00000038897)	AP3S2 (ENSHGLG00000048118) #7	ANPEP (ENSHGLG00000009602) #8	ENSHGLG00000032990	KIF7 (ENSHGLG00000007549) #14	ENSHGLG00000042458	TICRR (ENSHGLG00000007225) #15	RHCG (ENSHGLG00000006901) #16	ENSHGLG00000046781 #17	ENSHGLG00000037675 #18	RLBP1 (ENSHGLG00000043956) #19	ABHD2 (ENSHGLG00000032057) #20	HAPLN3 (ENSHGLG00000005670) #22	ENSHGLG00000005607 #23	ISG20 (ENSHGLG00000048328) #24	ENSHGLG00000048438 #25	ENSHGLG00000036335	ENSHGLG00000045353	MRPS11 (ENSHGLG00000007732) #26	ENSHGLG00000020611	MRPL46 (ENSHGLG00000050734) #27	NTRK3 (ENSHGLG00000007071) #28	AGBL1 (ENSHGLG00000006320) #32	ENSHGLG00000005641 #34	ENSHGLG00000041042	ENSHGLG00000034109	ENSHGLG00000005268 #35	ENSHGLG00000047990
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224.b	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Marmotini	ANCESTRAL SPECIES	46	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224.b	ENSGT00940000164653	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000153253.b.a.g.j	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37
Marmotini_b	ANCESTRAL SPECIES	42	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224.b	ENSGT00940000164653	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000153253.b.a.g.j	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.q #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37
Arctic ground squirrel	MODERN SPECIES	56	MESP2 (ENSUPAG00010015815) #9	MESP1 (ENSUPAG00010015825) #10	WDR93 (ENSUPAG00010015839) #11	PEX11A (ENSUPAG00010015860) #12	PLIN1 (ENSUPAG00010015869) #13	KIF7 (ENSUPAG00010015897) #14	ENSUPAG00010016019	ENSUPAG00010016023 #15	RHCG (ENSUPAG00010016033) #16	POLG (ENSUPAG00010016054) #17	FANCI (ENSUPAG00010016153) #18	RLBP1 (ENSUPAG00010016218) #19	ABHD2 (ENSUPAG00010016236) #20	ENSUPAG00010016265	MFGE8 (ENSUPAG00010016269) #21	HAPLN3 (ENSUPAG00010016282) #22	ACAN (ENSUPAG00010016299) #23	ENSUPAG00010016330	ISG20 (ENSUPAG00010016339) #24	ENSUPAG00010016361	AEN (ENSUPAG00010016372) #25	DET1 (ENSUPAG00010016389)	ENSUPAG00010016405	MRPS11 (ENSUPAG00010016410) #26	MRPL46 (ENSUPAG00010016440) #27	ENSUPAG00010016460	NTRK3 (ENSUPAG00010016474) #28
Squirrel	MODERN SPECIES	83	AP3S2 (ENSSTOG00000005150) #7	ANPEP (ENSSTOG00000005119) #8	MESP2 (ENSSTOG00000025753) #9	MESP1 (ENSSTOG00000026434) #10	WDR93 (ENSSTOG00000005070) #11	PEX11A (ENSSTOG00000006148) #12	PLIN1 (ENSSTOG00000025819) #13	KIF7 (ENSSTOG00000023960) #14	ENSSTOG00000006086 #15	RHCG (ENSSTOG00000006067) #16	POLG (ENSSTOG00000006860) #17	FANCI (ENSSTOG00000006814) #18	RLBP1 (ENSSTOG00000005869) #19	ABHD2 (ENSSTOG00000005849) #20	MFGE8 (ENSSTOG00000001748) #21	HAPLN3 (ENSSTOG00000021403) #22	ACAN (ENSSTOG00000027716) #23	ISG20 (ENSSTOG00000020467) #24	ENSSTOG00000011560 #25	ENSSTOG00000034936	DET1 (ENSSTOG00000021107)	MRPS11 (ENSSTOG00000021237) #26	MRPL46 (ENSSTOG00000011555) #27	NTRK3 (ENSSTOG00000003812) #28	AGBL1 (ENSSTOG00000014915) #32	KLHL25 (ENSSTOG00000023823) #33	ENSSTOG00000020484 #34	SV2B (ENSSTOG00000011621) #35	SLCO3A1 (ENSSTOG00000012990) #36	ST8SIA2 (ENSSTOG00000012529) #37	CHD2 (ENSSTOG00000001270)
Alpin marmot	MODERN SPECIES	33	AP3S2 (ENSMMMG00000019848) #7	ANPEP (ENSMMMG00000019853) #8	MESP2 (ENSMMMG00000019870) #9	WDR93 (ENSMMMG00000019877) #11	PEX11A (ENSMMMG00000019894) #12	PLIN1 (ENSMMMG00000019900) #13	KIF7 (ENSMMMG00000019929) #14	ENSMMMG00000019976	ENSMMMG00000019982 #15	RHCG (ENSMMMG00000019986) #16	POLG (ENSMMMG00000020022) #17	FANCI (ENSMMMG00000020036) #18	RLBP1 (ENSMMMG00000020074) #19	ABHD2 (ENSMMMG00000020084) #20	MFGE8 (ENSMMMG00000020100) #21	HAPLN3 (ENSMMMG00000020152) #22	ENSMMMG00000020167 #23	ENSMMMG00000020175 #23	ISG20 (ENSMMMG00000020185) #24	AEN (ENSMMMG00000020194) #25	DET1 (ENSMMMG00000020204)	ENSMMMG00000020215	MRPS11 (ENSMMMG00000020219) #26	MRPL46 (ENSMMMG00000020227) #27	ENSMMMG00000020246	NTRK3 (ENSMMMG00000020253) #28	ENSMMMG00000020299	AGBL1 (ENSMMMG00000020313) #32	KLHL25 (ENSMMMG00000020401) #33	AKAP13 (ENSMMMG00000020418) #34	SV2B (ENSMMMG00000020704) #35
Tree shrew	MODERN SPECIES	2816																HAPLN3 (ENSTBEG00000001965) #22	ACAN (ENSTBEG00000009146) #23
Primates	ANCESTRAL SPECIES	2	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Haplorrhini	ANCESTRAL SPECIES	36	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34
Simiiformes	ANCESTRAL SPECIES	28	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f
Catarrhini	ANCESTRAL SPECIES	9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d
Hominoidea	ANCESTRAL SPECIES	28	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a
Hominidae	ANCESTRAL SPECIES	27	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00390000011515.c.b.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	30	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00390000011515.c.b.b	ENSGT00940000156422	ENSGT00390000016025.b.g	ENSGT00940000158534.d	ENSGT00940000158357
Homo/Pan group	ANCESTRAL SPECIES	29	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00390000011515.c.b.b	ENSGT00940000156422	ENSGT00390000016025.b.g	ENSGT00940000158534.d	ENSGT00940000158357
Pan	ANCESTRAL SPECIES	34	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00390000011515.c.b.b	ENSGT00940000156422	ENSGT00390000016025.b.g	ENSGT00940000158534.d	ENSGT00940000158357
Bonobo	MODERN SPECIES	6	MESP1 (ENSPPAG00000030355) #10	WDR93 (ENSPPAG00000042043) #11	PEX11A (ENSPPAG00000037244) #12	PLIN1 (ENSPPAG00000030961) #13	KIF7 (ENSPPAG00000039761) #14	TICRR (ENSPPAG00000040895) #15	RHCG (ENSPPAG00000040713) #16	POLG (ENSPPAG00000043082) #17	FANCI (ENSPPAG00000023949) #18	RLBP1 (ENSPPAG00000029103) #19	ENSPPAG00000007167	ENSPPAG00000041534	ABHD2 (ENSPPAG00000043154) #20	ENSPPAG00000033380	MFGE8 (ENSPPAG00000027594) #21	HAPLN3 (ENSPPAG00000035615) #22	ACAN (ENSPPAG00000038878) #23	ISG20 (ENSPPAG00000028868) #24	AEN (ENSPPAG00000039598) #25	ENSPPAG00000012515	DET1 (ENSPPAG00000042560)	MRPS11 (ENSPPAG00000028073) #26	MRPL46 (ENSPPAG00000040630) #27	NTRK3 (ENSPPAG00000042420) #28	AGBL1 (ENSPPAG00000037816) #32	KLHL25 (ENSPPAG00000024283) #33	AKAP13 (ENSPPAG00000039683) #34	ENSPPAG00000028694	PDE8A (ENSPPAG00000043724)	SLC28A1 (ENSPPAG00000038512)	ENSPPAG00000036550
Chimpanzee	MODERN SPECIES	6	MESP2 (ENSPTRG00000007440) #9	MESP1 (ENSPTRG00000007439) #10	WDR93 (ENSPTRG00000007438) #11	PEX11A (ENSPTRG00000007437) #12	PLIN1 (ENSPTRG00000007436) #13	KIF7 (ENSPTRG00000007434) #14	TICRR (ENSPTRG00000007433) #15	RHCG (ENSPTRG00000007432) #16	POLG (ENSPTRG00000007431) #17	FANCI (ENSPTRG00000007430) #18	RLBP1 (ENSPTRG00000007429) #19	ENSPTRG00000044486	ENSPTRG00000044830	ABHD2 (ENSPTRG00000007427) #20	MFGE8 (ENSPTRG00000007426) #21	HAPLN3 (ENSPTRG00000007425) #22	ACAN (ENSPTRG00000007424) #23	ISG20 (ENSPTRG00000044668) #24	AEN (ENSPTRG00000007422) #25	DET1 (ENSPTRG00000007421)	MRPS11 (ENSPTRG00000007420) #26	MRPL46 (ENSPTRG00000007419) #27	NTRK3 (ENSPTRG00000007418) #28	AGBL1 (ENSPTRG00000007416) #32	KLHL25 (ENSPTRG00000007415) #33	AKAP13 (ENSPTRG00000007414) #34	ENSPTRG00000047141	PDE8A (ENSPTRG00000007408)	SLC28A1 (ENSPTRG00000007407)	ALPK3 (ENSPTRG00000007406)	ZNF592 (ENSPTRG00000007405)
Human	MODERN SPECIES	6	ANPEP (ENSG00000166825) #8	MESP2 (ENSG00000188095) #9	MESP1 (ENSG00000166823) #10	WDR93 (ENSG00000140527) #11	PEX11A (ENSG00000166821) #12	PLIN1 (ENSG00000166819) #13	KIF7 (ENSG00000166813) #14	TICRR (ENSG00000140534) #15	RHCG (ENSG00000140519) #16	POLGARF (ENSG00000291307)	POLG (ENSG00000140521) #17	FANCI (ENSG00000140525) #18	RLBP1 (ENSG00000140522) #19	ABHD2 (ENSG00000140526) #20	MFGE8 (ENSG00000140545) #21	HAPLN3 (ENSG00000140511) #22	ACAN (ENSG00000157766) #23	ISG20 (ENSG00000172183) #24	AEN (ENSG00000181026) #25	DET1 (ENSG00000140543)	MRPS11 (ENSG00000181991) #26	ENSG00000173867	MRPL46 (ENSG00000259494) #27	NTRK3 (ENSG00000140538) #28	AGBL1 (ENSG00000273540) #32	KLHL25 (ENSG00000183655) #33	AKAP13 (ENSG00000170776) #34	PDE8A (ENSG00000073417)	SLC28A1 (ENSG00000156222)	ALPK3 (ENSG00000136383)	ZNF592 (ENSG00000166716)
Gorilla	MODERN SPECIES	6	MESP2 (ENSGGOG00000005683) #9	MESP1 (ENSGGOG00000014946) #10	WDR93 (ENSGGOG00000010616) #11	PEX11A (ENSGGOG00000016919) #12	PLIN1 (ENSGGOG00000017088) #13	KIF7 (ENSGGOG00000008509) #14	TICRR (ENSGGOG00000008492) #15	RHCG (ENSGGOG00000015465) #16	POLG (ENSGGOG00000011727) #17	FANCI (ENSGGOG00000011696) #18	RLBP1 (ENSGGOG00000011688) #19	ENSGGOG00000025704	ABHD2 (ENSGGOG00000011681) #20	ENSGGOG00000036502	MFGE8 (ENSGGOG00000014551) #21	HAPLN3 (ENSGGOG00000005272) #22	ACAN (ENSGGOG00000005262) #23	ISG20 (ENSGGOG00000010365) #24	AEN (ENSGGOG00000010180) #25	DET1 (ENSGGOG00000015157)	MRPS11 (ENSGGOG00000015152) #26	MRPL46 (ENSGGOG00000015148) #27	NTRK3 (ENSGGOG00000010222) #28	AGBL1 (ENSGGOG00000034983) #32	KLHL25 (ENSGGOG00000010730) #33	AKAP13 (ENSGGOG00000000774) #34	ENSGGOG00000041210	PDE8A (ENSGGOG00000014523)	SLC28A1 (ENSGGOG00000009389)	ALPK3 (ENSGGOG00000009380)	ZNF592 (ENSGGOG00000009373)
Orangutan	MODERN SPECIES	6	ENSPPYG00000037279	ANPEP (ENSPPYG00000006772) #8	MESP2 (ENSPPYG00000006771) #9	MESP1 (ENSPPYG00000006864) #10	WDR93 (ENSPPYG00000006770) #11	PEX11A (ENSPPYG00000006769) #12	PLIN1 (ENSPPYG00000006768) #13	KIF7 (ENSPPYG00000006767) #14	TICRR (ENSPPYG00000006766) #15	RHCG (ENSPPYG00000006765) #16	POLG (ENSPPYG00000006763) #17	FANCI (ENSPPYG00000006762) #18	RLBP1 (ENSPPYG00000006761) #19	ABHD2 (ENSPPYG00000006760) #20	MFGE8 (ENSPPYG00000006759) #21	HAPLN3 (ENSPPYG00000006758) #22	ENSPPYG00000006757 #23	ISG20 (ENSPPYG00000006756) #24	AEN (ENSPPYG00000006755) #25	DET1 (ENSPPYG00000006753)	MRPS11 (ENSPPYG00000006751) #26	MRPL46 (ENSPPYG00000006750) #27	NTRK3 (ENSPPYG00000006749) #28	AGBL1 (ENSPPYG00000006747) #32	ENSPPYG00000037873	KLHL25 (ENSPPYG00000006746) #33	AKAP13 (ENSPPYG00000006745) #34	ENSPPYG00000006873	ZSCAN2 (ENSPPYG00000006877)	ENSPPYG00000039060	WDR73 (ENSPPYG00000006879)
Gibbon	MODERN SPECIES	21	MESP2 (ENSNLEG00000011765) #9	ENSNLEG00000011763 #10	WDR93 (ENSNLEG00000011758) #11	PEX11A (ENSNLEG00000027966) #12	PLIN1 (ENSNLEG00000035855) #13	ENSNLEG00000029376	KIF7 (ENSNLEG00000011722) #14	TICRR (ENSNLEG00000011685) #15	RHCG (ENSNLEG00000032456) #16	POLG (ENSNLEG00000011632) #17	FANCI (ENSNLEG00000011520) #18	RLBP1 (ENSNLEG00000011513) #19	ENSNLEG00000029391	ABHD2 (ENSNLEG00000011501) #20	MFGE8 (ENSNLEG00000011483) #21	HAPLN3 (ENSNLEG00000011475) #22	ENSNLEG00000030173 #23	ISG20 (ENSNLEG00000033379) #24	AEN (ENSNLEG00000032314) #25	MRPS11 (ENSNLEG00000034839) #26	MRPL46 (ENSNLEG00000011430) #27	NTRK3 (ENSNLEG00000011410) #28	AGBL1 (ENSNLEG00000011396) #32	KLHL25 (ENSNLEG00000011390) #33	AKAP13 (ENSNLEG00000011353) #34	ZSCAN2 (ENSNLEG00000011329)	ENSNLEG00000018883	WDR73 (ENSNLEG00000011299)	NMB (ENSNLEG00000011294)	ENSNLEG00000028435	ZNF592 (ENSNLEG00000011267)
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00910000147807	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a #34	ENSGT00390000011515.c.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d
Rhinopithecus	ANCESTRAL SPECIES	496															ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00950000183498
Black snub-nosed monkey	MODERN SPECIES	697															MFGE8 (ENSRBIG00000043934) #21	HAPLN3 (ENSRBIG00000036430) #22	ACAN (ENSRBIG00000043390) #23	ISG20 (ENSRBIG00000041506) #24	AEN (ENSRBIG00000031540) #25	DET1 (ENSRBIG00000044629)	MRPS11 (ENSRBIG00000035902) #26	MRPL46 (ENSRBIG00000041366) #27	NTRK3 (ENSRBIG00000032706) #28	ENSRBIG00000034175	SYT3 (ENSRBIG00000042491)	LRRC4B (ENSRBIG00000010560)	ASPDH (ENSRBIG00000022144)	JOSD2 (ENSRBIG00000034097)	EMC10 (ENSRBIG00000033763)	ENSRBIG00000028943	MYBPC2 (ENSRBIG00000029032)
Golden snub-nosed monkey	MODERN SPECIES	1019															MFGE8 (ENSRROG00000031391) #21	HAPLN3 (ENSRROG00000032462) #22	ACAN (ENSRROG00000038858) #23	ISG20 (ENSRROG00000043326) #24	AEN (ENSRROG00000043282) #25	DET1 (ENSRROG00000041396)	MRPS11 (ENSRROG00000032838) #26	MRPL46 (ENSRROG00000025867) #27	NTRK3 (ENSRROG00000045073) #28	ENSRROG00000036742
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a #34	ENSGT00390000011515.c.b	ENSGT00940000161710	ENSGT00940000154740.a.a.d
Vervet Monkey	MODERN SPECIES	21	ARPIN (ENSCSAG00000017125)	ANPEP (ENSCSAG00000017127) #8	ENSCSAG00000017130 ##9	MESP1 (ENSCSAG00000017134) #10	WDR93 (ENSCSAG00000017138) #11	PEX11A (ENSCSAG00000017146) #12	PLIN1 (ENSCSAG00000017149) #13	KIF7 (ENSCSAG00000017151) #14	TICRR (ENSCSAG00000017156) #15	RHCG (ENSCSAG00000017160) #16	POLG (ENSCSAG00000017164) #17	FANCI (ENSCSAG00000017169) #18	RLBP1 (ENSCSAG00000017173) #19	ABHD2 (ENSCSAG00000017178) #20	MFGE8 (ENSCSAG00000017181) #21	HAPLN3 (ENSCSAG00000017182) #22	ENSCSAG00000017184	ENSCSAG00000017186 #23	ISG20 (ENSCSAG00000017194) #24	AEN (ENSCSAG00000017196) #25	DET1 (ENSCSAG00000017198)	MRPS11 (ENSCSAG00000017199) #26	MRPL46 (ENSCSAG00000017201) #27	NTRK3 (ENSCSAG00000017205) #28	AGBL1 (ENSCSAG00000017210) #32	KLHL25 (ENSCSAG00000000368) #33	ENSCSAG00000000369	AKAP13 (ENSCSAG00000017226) #34	ENSCSAG00000017231	ZSCAN2 (ENSCSAG00000017237)	WDR73 (ENSCSAG00000017238)
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00950000183498	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00940000154740.a.a.d
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000154876.b #8	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00950000183498	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00910000147443	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701
Pig-tailed macaque	MODERN SPECIES	145	MESP1 (ENSMNEG00000044421) #10	WDR93 (ENSMNEG00000030231) #11	PEX11A (ENSMNEG00000036911) #12	PLIN1 (ENSMNEG00000030806) #13	KIF7 (ENSMNEG00000041972) #14	ENSMNEG00000033244	TICRR (ENSMNEG00000039151) #15	RHCG (ENSMNEG00000038007) #16	POLG (ENSMNEG00000019045) #17	FANCI (ENSMNEG00000043844) #18	RLBP1 (ENSMNEG00000040417) #19	ENSMNEG00000033871	ABHD2 (ENSMNEG00000044961) #20	ENSMNEG00000027454	MFGE8 (ENSMNEG00000029493) #21	HAPLN3 (ENSMNEG00000029438) #22	ACAN (ENSMNEG00000033900) #23	ISG20 (ENSMNEG00000030310) #24	AEN (ENSMNEG00000040133) #25	DET1 (ENSMNEG00000037342)	MRPS11 (ENSMNEG00000039978) #26	MRPL46 (ENSMNEG00000041721) #27	NTRK3 (ENSMNEG00000034718) #28	ENSMNEG00000043936	AGBL1 (ENSMNEG00000044533) #32	KLHL25 (ENSMNEG00000023724) #33	ENSMNEG00000043517	AKAP13 (ENSMNEG00000035804) #34
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT01100000263493.a.b.b.b.b.a.a.a.b.b.a	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT01100000264560	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000163244.d.b.a.b.b.a.a.a.a.a.b	ENSGT00940000161660 #25	ENSGT00940000163505.a.a.b.a.a.b.b.b.a.b	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000169036.b	ENSGT00940000161710
Crab-eating macaque	MODERN SPECIES	17	MESP1 (ENSMFAG00000045799) #10	ANPEP (ENSMFAG00000031450) #8	WDR93 (ENSMFAG00000035737) #11	PEX11A (ENSMFAG00000055282) #12	PLIN1 (ENSMFAG00000034321) #13	KIF7 (ENSMFAG00000044171) #14	TICRR (ENSMFAG00000031426) #15	RHCG (ENSMFAG00000003348) #16	POLG (ENSMFAG00000042476) #17	FANCI (ENSMFAG00000035758) #18	ENSMFAG00000064903	RLBP1 (ENSMFAG00000036414) #19	ENSMFAG00000059216	ABHD2 (ENSMFAG00000034068) #20	MFGE8 (ENSMFAG00000037952) #21	HAPLN3 (ENSMFAG00000039242) #22	ENSMFAG00000050534	ACAN (ENSMFAG00000019208) #23	ENSMFAG00000032331	ENSMFAG00000058521	AEN (ENSMFAG00000001458) #25	ENSMFAG00000050904	DET1 (ENSMFAG00000043815)	MRPS11 (ENSMFAG00000001006) #26	MRPL46 (ENSMFAG00000037394) #27	ENSMFAG00000049995	ENSMFAG00000059678	NTRK3 (ENSMFAG00000044160) #28	ENSMFAG00000049111	ENSMFAG00000063264	AGBL1 (ENSMFAG00000040080) #32
Rhesus	MODERN SPECIES	17	ANPEP (ENSMMUG00000014983) #8	MESP2 (ENSMMUG00000003584) #9	MESP1 (ENSMMUG00000010586) #10	WDR93 (ENSMMUG00000015394) #11	PEX11A (ENSMMUG00000051701) #12	PLIN1 (ENSMMUG00000017746) #13	KIF7 (ENSMMUG00000056204) #14	TICRR (ENSMMUG00000001254) #15	RHCG (ENSMMUG00000022678) #16	POLG (ENSMMUG00000011160) #17	FANCI (ENSMMUG00000011155) #18	ENSMMUG00000063925	RLBP1 (ENSMMUG00000014420) #19	ABHD2 (ENSMMUG00000014414) #20	MFGE8 (ENSMMUG00000043001) #21	HAPLN3 (ENSMMUG00000000556) #22	ENSMMUG00000064666	ACAN (ENSMMUG00000000554) #23	ISG20 (ENSMMUG00000007669) #24	ENSMMUG00000059062	AEN (ENSMMUG00000022516) #25	ENSMMUG00000059775	DET1 (ENSMMUG00000005758)	MRPS11 (ENSMMUG00000057531) #26	MRPL46 (ENSMMUG00000013658) #27	NTRK3 (ENSMMUG00000001386) #28	ENSMMUG00000054316	AGBL1 (ENSMMUG00000008495) #32	KLHL25 (ENSMMUG00000050063) #33	AKAP13 (ENSMMUG00000011251) #34	ENSMMUG00000058850
Cercopithecinae_b	ANCESTRAL SPECIES	47	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00950000183498	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00390000015701
Olive baboon	MODERN SPECIES	17	PLIN1 (ENSPANG00000014257) #13	KIF7 (ENSPANG00000011178) #14	TICRR (ENSPANG00000011179) #15	ENSPANG00000047678	RHCG (ENSPANG00000021471) #16	POLG (ENSPANG00000014259) #17	FANCI (ENSPANG00000014260) #18	RLBP1 (ENSPANG00000011182) #19	ABHD2 (ENSPANG00000025597) #20	ENSPANG00000039388	ENSPANG00000038391	ENSPANG00000039782	ENSPANG00000050268	ENSPANG00000046039	MFGE8 (ENSPANG00000026189) #21	HAPLN3 (ENSPANG00000025601) #22	ENSPANG00000034658	ENSPANG00000048489	AEN (ENSPANG00000005905) #25	DET1 (ENSPANG00000011752)	MRPS11 (ENSPANG00000011753) #26	MRPL46 (ENSPANG00000000922) #27	NTRK3 (ENSPANG00000000921) #28	ENSPANG00000037332	ENSPANG00000047709	ENSPANG00000044734	ENSPANG00000039548	AGBL1 (ENSPANG00000011754) #32	ENSPANG00000040249	ENSPANG00000045098	KLHL25 (ENSPANG00000005906) #33
Cercopithecinae_d	ANCESTRAL SPECIES	119	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a #20	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00950000183498	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a #34	ENSGT00940000156422	ENSGT00390000016025.b.g
Drill	MODERN SPECIES	938	ANPEP (ENSMLEG00000031827) #8	ENSMLEG00000015738	WDR93 (ENSMLEG00000040292) #11	PEX11A (ENSMLEG00000035362) #12	PLIN1 (ENSMLEG00000035456) #13	ENSMLEG00000036717	KIF7 (ENSMLEG00000032641) #14	TICRR (ENSMLEG00000031117) #15	RHCG (ENSMLEG00000033539) #16	POLG (ENSMLEG00000039213) #17	FANCI (ENSMLEG00000032664) #18	RLBP1 (ENSMLEG00000016354) #19	ENSMLEG00000041296	ABHD2 (ENSMLEG00000025422) #20	MFGE8 (ENSMLEG00000040733) #21	HAPLN3 (ENSMLEG00000030224) #22	ACAN (ENSMLEG00000043677) #23	ISG20 (ENSMLEG00000038761) #24	AEN (ENSMLEG00000032850) #25	DET1 (ENSMLEG00000034955)	MRPS11 (ENSMLEG00000037050) #26	MRPL46 (ENSMLEG00000043694) #27	NTRK3 (ENSMLEG00000029871) #28	ENSMLEG00000036997
Sooty mangabey	MODERN SPECIES	188	MESP1 (ENSCATG00000028176) #10	WDR93 (ENSCATG00000034611) #11	PEX11A (ENSCATG00000029697) #12	PLIN1 (ENSCATG00000041840) #13	KIF7 (ENSCATG00000014352) #14	ENSCATG00000030890	TICRR (ENSCATG00000042250) #15	RHCG (ENSCATG00000034456) #16	POLG (ENSCATG00000035940) #17	FANCI (ENSCATG00000037507) #18	RLBP1 (ENSCATG00000019246) #19	ENSCATG00000034199	ABHD2 (ENSCATG00000034222) #20	ENSCATG00000041050	MFGE8 (ENSCATG00000002145) #21	HAPLN3 (ENSCATG00000009472) #22	ACAN (ENSCATG00000029026) #23	ENSCATG00000019964	ISG20 (ENSCATG00000042494) #24	AEN (ENSCATG00000034567) #25	DET1 (ENSCATG00000040161)	MRPS11 (ENSCATG00000016716) #26	MRPL46 (ENSCATG00000041595) #27	NTRK3 (ENSCATG00000031981) #28	ENSCATG00000028932	AGBL1 (ENSCATG00000036629) #32	KLHL25 (ENSCATG00000023062) #33	ENSCATG00000022798	ENSCATG00000018381	AKAP13 (ENSCATG00000033640) #34
Platyrrhini	ANCESTRAL SPECIES	38	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357
Cebidae	ANCESTRAL SPECIES	36	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357
Cebidae_a	ANCESTRAL SPECIES	66	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000161710	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f	ENSGT00940000158357	ENSGT00940000158534.d
Bolivian squirrel monkey	MODERN SPECIES	45	ANPEP (ENSSBOG00000024297) #8	MESP2 (ENSSBOG00000033873) #9	MESP1 (ENSSBOG00000000188) #10	WDR93 (ENSSBOG00000027681) #11	PEX11A (ENSSBOG00000031420) #12	PLIN1 (ENSSBOG00000034579) #13	ENSSBOG00000022131	KIF7 (ENSSBOG00000025528) #14	TICRR (ENSSBOG00000035734) #15	RHCG (ENSSBOG00000035536) #16	POLG (ENSSBOG00000034032) #17	FANCI (ENSSBOG00000031461) #18	RLBP1 (ENSSBOG00000033372) #19	ABHD2 (ENSSBOG00000020238) #20	MFGE8 (ENSSBOG00000020877) #21	HAPLN3 (ENSSBOG00000025420) #22	ACAN (ENSSBOG00000027640) #23	ISG20 (ENSSBOG00000031539) #24	AEN (ENSSBOG00000021857) #25	DET1 (ENSSBOG00000022107)	MRPS11 (ENSSBOG00000032874) #26	ENSSBOG00000032094 #27	NTRK3 (ENSSBOG00000029993) #28	ENSSBOG00000019134	KLHL25 (ENSSBOG00000017694) #33	AKAP13 (ENSSBOG00000021251) #34	ZSCAN2 (ENSSBOG00000020060)	WDR73 (ENSSBOG00000032032)	NMB (ENSSBOG00000029762)	SEC11A (ENSSBOG00000024018)	ENSSBOG00000026502
Capuchin	MODERN SPECIES	348					ENSCCAG00000025191	RCCD1 (ENSCCAG00000020832)	UNC45A (ENSCCAG00000025631)	ENSCCAG00000005575	MAN2A2 (ENSCCAG00000037766)	FES (ENSCCAG00000035985)	FURIN (ENSCCAG00000025015)	BLM (ENSCCAG00000023069)	CRTC3 (ENSCCAG00000029587)	IQGAP1 (ENSCCAG00000033110)	MFGE8 (ENSCCAG00000024386) #21	HAPLN3 (ENSCCAG00000032813) #22	ACAN (ENSCCAG00000020563) #23	ISG20 (ENSCCAG00000025395) #24	AEN (ENSCCAG00000037160) #25	ENSCCAG00000032256	DET1 (ENSCCAG00000029690)	ENSCCAG00000034277	ENSCCAG00000031468 #26	MRPL46 (ENSCCAG00000026434) #27	NTRK3 (ENSCCAG00000035612) #28
Marmoset	MODERN SPECIES	18	AP3S2 (ENSCJAG00000083796) #7	ANPEP (ENSCJAG00000007096) #8	MESP2 (ENSCJAG00000080320) #9	WDR93 (ENSCJAG00000012691) #11	PEX11A (ENSCJAG00000012706) #12	PLIN1 (ENSCJAG00000012709) #13	MESP1 (ENSCJAG00000007088) #10	KIF7 (ENSCJAG00000012723) #14	TICRR (ENSCJAG00000012742) #15	RHCG (ENSCJAG00000054474) #16	POLG (ENSCJAG00000012773) #17	FANCI (ENSCJAG00000012809) #18	RLBP1 (ENSCJAG00000012881) #19	ABHD2 (ENSCJAG00000073988) #20	MFGE8 (ENSCJAG00000012940) #21	HAPLN3 (ENSCJAG00000012941) #22	ENSCJAG00000012944 #23	ISG20 (ENSCJAG00000034923) #24	AEN (ENSCJAG00000012988) #25	ENSCJAG00000071180	ENSCJAG00000006158	DET1 (ENSCJAG00000012996)	MRPS11 (ENSCJAG00000013012) #26	MRPL46 (ENSCJAG00000013019) #27	ENSCJAG00000073021	NTRK3 (ENSCJAG00000013026) #28	ENSCJAG00000076747	AGBL1 (ENSCJAG00000013146) #32	ENSCJAG00000085056	MCTP2 (ENSCJAG00000005975)	ENSCJAG00000083850
Mas night monkey	MODERN SPECIES	785	ENSANAG00000027233	ENSANAG00000036512	ENSANAG00000034817	IGF1R (ENSANAG00000037101)	SYNM (ENSANAG00000036475)	ENSANAG00000030470	TTC23 (ENSANAG00000019664)	ENSANAG00000030562	ENSANAG00000031589	MEF2A (ENSANAG00000023103)	LYSMD4 (ENSANAG00000029865)	ADAMTS17 (ENSANAG00000019818)	CERS3 (ENSANAG00000033014)	LINS1 (ENSANAG00000024421)	MFGE8 (ENSANAG00000020190) #21	HAPLN3 (ENSANAG00000016050) #22	ACAN (ENSANAG00000022078) #23	ENSANAG00000023023 #24	AEN (ENSANAG00000026698) #25	DET1 (ENSANAG00000031474)	MRPS11 (ENSANAG00000035828) #26	MRPL46 (ENSANAG00000023769) #27	ENSANAG00000034587	NTRK3 (ENSANAG00000034807) #28	AGBL1 (ENSANAG00000030461) #32	ENSANAG00000024133	TMED7 (ENSANAG00000026472)	TICAM2 (ENSANAG00000014623)	FEM1C (ENSANAG00000036196)	ENSANAG00000029614	ENSANAG00000032537
Tarsier	MODERN SPECIES	6669	AP3S2 (ENSTSYG00000002538) #7	ANPEP (ENSTSYG00000035014) #8	ENSTSYG00000029903	WDR93 (ENSTSYG00000012001) #11	PEX11A (ENSTSYG00000013744) #12	PLIN1 (ENSTSYG00000029869) #13	KIF7 (ENSTSYG00000036014) #14	ENSTSYG00000025913 #15	RHCG (ENSTSYG00000010178) #16	POLG (ENSTSYG00000012929) #17	FANCI (ENSTSYG00000012901) #18	RLBP1 (ENSTSYG00000034357) #19	ABHD2 (ENSTSYG00000005161) #20	ENSTSYG00000028467	MFGE8 (ENSTSYG00000031077) #21	HAPLN3 (ENSTSYG00000014650) #22	ACAN (ENSTSYG00000007588) #23	ISG20 (ENSTSYG00000030528) #24
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Lemuriformes	ANCESTRAL SPECIES	43	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Mouse lemur	MODERN SPECIES	31	ENSMICG00000027750	ADAMTS7 (ENSMICG00000035475)	TBC1D2B (ENSMICG00000009141)	SH2D7 (ENSMICG00000046037)	CIB2 (ENSMICG00000033416)	ENSMICG00000015401	ENSMICG00000030809	MINAR1 (ENSMICG00000041908)	RASGRF1 (ENSMICG00000036744)	POLG (ENSMICG00000001951) #17	ENSMICG00000043282	FANCI (ENSMICG00000001936) #18	RLBP1 (ENSMICG00000042518) #19	ABHD2 (ENSMICG00000001927) #20	MFGE8 (ENSMICG00000015488) #21	HAPLN3 (ENSMICG00000044864) #22	ENSMICG00000029876 #23	ISG20 (ENSMICG00000027508) #24	AEN (ENSMICG00000027602) #25	DET1 (ENSMICG00000015841)	MRPS11 (ENSMICG00000015830) #26	MRPL46 (ENSMICG00000015826) #27	NTRK3 (ENSMICG00000004359) #28	AGBL1 (ENSMICG00000015149) #32	KLHL25 (ENSMICG00000013665) #33	AKAP13 (ENSMICG00000013618) #34	SV2B (ENSMICG00000017792) #35	SLCO3A1 (ENSMICG00000010035) #36	ST8SIA2 (ENSMICG00000012129) #37	ENSMICG00000035704	CHRNA7 (ENSMICG00000032002)
Lemuriformes_a	ANCESTRAL SPECIES	59	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00940000155888	ENSGT00950000183112.a
Greater bamboo lemur	MODERN SPECIES	829												ENSPSMG00000005645 #18	RLBP1 (ENSPSMG00000005641) #19	ABHD2 (ENSPSMG00000005608) #20	MFGE8 (ENSPSMG00000005575) #21	HAPLN3 (ENSPSMG00000005564) #22	ENSPSMG00000005562 #23	ISG20 (ENSPSMG00000005554) #24	AEN (ENSPSMG00000005545) #25	DET1 (ENSPSMG00000005536)	MRPS11 (ENSPSMG00000005518) #26	MRPL46 (ENSPSMG00000005512) #27	NTRK3 (ENSPSMG00000005098) #28
Coquerels sifaka	MODERN SPECIES	289	ANPEP (ENSPCOG00000014730) #8	MESP2 (ENSPCOG00000018659) #9	MESP1 (ENSPCOG00000000342) #10	WDR93 (ENSPCOG00000022396) #11	PEX11A (ENSPCOG00000014584) #12	PLIN1 (ENSPCOG00000014622) #13	KIF7 (ENSPCOG00000018726) #14	TICRR (ENSPCOG00000013938) #15	RHCG (ENSPCOG00000004475) #16	POLG (ENSPCOG00000022538) #17	FANCI (ENSPCOG00000021705) #18	ENSPCOG00000015600	RLBP1 (ENSPCOG00000000662) #19	ABHD2 (ENSPCOG00000016367) #20	MFGE8 (ENSPCOG00000025633) #21	HAPLN3 (ENSPCOG00000017611) #22	ENSPCOG00000016938 #23	ISG20 (ENSPCOG00000015727) #24	AEN (ENSPCOG00000020924) #25	DET1 (ENSPCOG00000023851)	MRPS11 (ENSPCOG00000019243) #26	MRPL46 (ENSPCOG00000014191) #27	NTRK3 (ENSPCOG00000026294) #28	KLHL25 (ENSPCOG00000000300) #33	AKAP13 (ENSPCOG00000026840) #34	SV2B (ENSPCOG00000010896) #35	SLCO3A1 (ENSPCOG00000025115) #36	ST8SIA2 (ENSPCOG00000022233) #37	ENSPCOG00000017907	CHD2 (ENSPCOG00000028084)	RGMA (ENSPCOG00000020215)
Bushbaby	MODERN SPECIES	144	ODF3L2 (ENSOGAG00000004604)	ENSOGAG00000004603	C2CD4C (ENSOGAG00000014587)	THEG (ENSOGAG00000004601)	MIER2 (ENSOGAG00000033097)	PLPP2 (ENSOGAG00000029675)	KIF7 (ENSOGAG00000030585) #14	TICRR (ENSOGAG00000003831) #15	ENSOGAG00000006589	RHCG (ENSOGAG00000008151) #16	POLG (ENSOGAG00000008148) #17	FANCI (ENSOGAG00000008142) #18	RLBP1 (ENSOGAG00000008139) #19	ABHD2 (ENSOGAG00000008133) #20	MFGE8 (ENSOGAG00000017042) #21	HAPLN3 (ENSOGAG00000017041) #22	ACAN (ENSOGAG00000017035) #23	ISG20 (ENSOGAG00000004742) #24	AEN (ENSOGAG00000029852) #25	DET1 (ENSOGAG00000004741)	MRPS11 (ENSOGAG00000004739) #26	MRPL46 (ENSOGAG00000004736) #27	NTRK3 (ENSOGAG00000004733) #28	ENSOGAG00000033402	ENSOGAG00000027084 #32	KLHL25 (ENSOGAG00000026263) #33	ENSOGAG00000007724 #34	ENSOGAG00000030493 #34	ENSOGAG00000025991 #34	SV2B (ENSOGAG00000005530) #35	SLCO3A1 (ENSOGAG00000007636) #36
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37
Suina	ANCESTRAL SPECIES	38	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000177011	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b.b
Pig	MODERN SPECIES	15	ANPEP (ENSSSCG00000001849) #8	MESP2 (ENSSSCG00000001848) #9	MESP1 (ENSSSCG00000001847) #10	WDR93 (ENSSSCG00000001846) #11	PEX11A (ENSSSCG00000027052) #12	PLIN1 (ENSSSCG00000001844) #13	ENSSSCG00000036100	KIF7 (ENSSSCG00000001840) #14	TICRR (ENSSSCG00000040355) #15	RHCG (ENSSSCG00000001841) #16	POLG (ENSSSCG00000001838) #17	FANCI (ENSSSCG00000001837) #18	RLBP1 (ENSSSCG00000001836) #19	ABHD2 (ENSSSCG00000001835) #20	MFGE8 (ENSSSCG00000001834) #21	HAPLN3 (ENSSSCG00000030597) #22	ACAN (ENSSSCG00000001832) #23	ENSSSCG00000001830	ENSSSCG00000034363	ENSSSCG00000035306	ENSSSCG00000032460	ENSSSCG00000050527	ENSSSCG00000033284	ENSSSCG00000041319	ENSSSCG00000034559	CFAP100 (ENSSSCG00000001826)	KLF15 (ENSSSCG00000036742)	ALDH1L1 (ENSSSCG00000030626)	SLC41A3 (ENSSSCG00000001825)	ZXDC (ENSSSCG00000001824)	UROC1 (ENSSSCG00000001823)
Chacoan peccary	MODERN SPECIES	882													RLBP1 (ENSCWAG00000012997) #19	ABHD2 (ENSCWAG00000012962) #20	MFGE8 (ENSCWAG00000012667) #21	HAPLN3 (ENSCWAG00000012630) #22	ACAN (ENSCWAG00000008106) #23	ENSCWAG00000007877	ENSCWAG00000007830	ENSCWAG00000007814	ENSCWAG00000007776	ENSCWAG00000007761	ENSCWAG00000007723
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.b.a.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36
Camelidae	ANCESTRAL SPECIES	21	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.a.b	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Arabian camel	MODERN SPECIES	19	AP3S2 (ENSCDRG00005020771) #7	ANPEP (ENSCDRG00005020759) #8	MESP2 (ENSCDRG00005020753) #9	MESP1 (ENSCDRG00005020745) #10	WDR93 (ENSCDRG00005020735) #11	PEX11A (ENSCDRG00005020721) #12	PLIN1 (ENSCDRG00005020709) #13	KIF7 (ENSCDRG00005020696) #14	TICRR (ENSCDRG00005020652) #15	RHCG (ENSCDRG00005020632) #16	POLG (ENSCDRG00005020609) #17	FANCI (ENSCDRG00005020577) #18	RLBP1 (ENSCDRG00005020563) #19	ABHD2 (ENSCDRG00005020558) #20	MFGE8 (ENSCDRG00005020507) #21	HAPLN3 (ENSCDRG00005020489) #22	ENSCDRG00005020479 #23	ENSCDRG00005020459 #23	ENSCDRG00005020446	ISG20 (ENSCDRG00005020438) #24	AEN (ENSCDRG00005020430) #25	DET1 (ENSCDRG00005020410)	MRPS11 (ENSCDRG00005020406) #26	MRPL46 (ENSCDRG00005020396) #27	NTRK3 (ENSCDRG00005020380) #28	AGBL1 (ENSCDRG00005020364) #32	KLHL25 (ENSCDRG00005020353) #33	AKAP13 (ENSCDRG00005020272) #34	SV2B (ENSCDRG00005020222) #35	SLCO3A1 (ENSCDRG00005020198) #36	ST8SIA2 (ENSCDRG00005020171) #37
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.b.a.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01020000230695
Cetacea	ANCESTRAL SPECIES	2	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000155811.m.b	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.b.a.b	ENSGT00940000160781 #24	ENSGT00940000161660.c.b #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01020000230695	ENSGT01080000257410.A.f #36
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00940000153434.a.b.a.a.a.a.b	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000155811.m.b	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00940000160781 #24	ENSGT00940000161660.c.b #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01020000230695	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00940000153434.a.b.a.a.a.a.b	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000155811.m.b	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00940000160781 #24	ENSGT00940000161660.c.b #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01020000230695	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00940000153434.a.b.a.a.a.a.b	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000155811.m.b	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00940000160781 #24	ENSGT00940000161660.c.b #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00940000155478.bb.b.a	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01020000230695	ENSGT01080000257410.A.f #36
Monodontidae	ANCESTRAL SPECIES	22	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00940000153434.a.b.a.a.a.a.b	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00940000160781 #24	ENSGT00940000161660.c.b #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00940000155478.bb.b.a	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00940000153877.h.d.g	ENSGT00950000182940.b.a.a #35	ENSGT01020000230695
Beluga whale	MODERN SPECIES	52	MESP1 (ENSDLEG00000009048) #10	ENSDLEG00000009078 #11	ENSDLEG00000009103 #11	PEX11A (ENSDLEG00000009119) #12	PLIN1 (ENSDLEG00000009130) #13	KIF7 (ENSDLEG00000009155) #14	ENSDLEG00000009217	TICRR (ENSDLEG00000009242) #15	ENSDLEG00000009444	RHCG (ENSDLEG00000009471) #16	POLG (ENSDLEG00000009575) #17	FANCI (ENSDLEG00000010533) #18	RLBP1 (ENSDLEG00000010677) #19	ABHD2 (ENSDLEG00000006021) #20	MFGE8 (ENSDLEG00000006033) #21	HAPLN3 (ENSDLEG00000006047) #22	ACAN (ENSDLEG00000006064) #23	ENSDLEG00000006094	ISG20 (ENSDLEG00000006099) #24	AEN (ENSDLEG00000006107) #25	DET1 (ENSDLEG00000006117)	MRPS11 (ENSDLEG00000006122) #26	MRPL46 (ENSDLEG00000006129) #27	NTRK3 (ENSDLEG00000006137) #28	AGBL1 (ENSDLEG00000006182) #32	ENSDLEG00000006204	KLHL25 (ENSDLEG00000006214) #33	AKAP13 (ENSDLEG00000006222) #34	ENSDLEG00000006254	SV2B (ENSDLEG00000006261) #35	ENSDLEG00000006266
Narwhal	MODERN SPECIES	308	MESP2 (ENSMMNG00015008284) #9	MESP1 (ENSMMNG00015008297) #10	WDR93 (ENSMMNG00015008315) #11	PEX11A (ENSMMNG00015008334) #12	PLIN1 (ENSMMNG00015008345) #13	KIF7 (ENSMMNG00015008356) #14	ENSMMNG00015008367	TICRR (ENSMMNG00015008381) #15	ENSMMNG00015008428	RHCG (ENSMMNG00015008451) #16	POLG (ENSMMNG00015008482) #17	FANCI (ENSMMNG00015008505) #18	RLBP1 (ENSMMNG00015008565) #19	ABHD2 (ENSMMNG00015008582) #20	MFGE8 (ENSMMNG00015008619) #21	HAPLN3 (ENSMMNG00015008668) #22	ENSMMNG00015008690 #23	ENSMMNG00015008708	ENSMMNG00015008724	ISG20 (ENSMMNG00015008732) #24	AEN (ENSMMNG00015008740) #25	DET1 (ENSMMNG00015008747)	MRPS11 (ENSMMNG00015008766) #26	MRPL46 (ENSMMNG00015008776) #27	NTRK3 (ENSMMNG00015008814) #28	AGBL1 (ENSMMNG00015008880) #32	ENSMMNG00015008904	KLHL25 (ENSMMNG00015008922) #33	AKAP13 (ENSMMNG00015009017) #34	ENSMMNG00015009180	SV2B (ENSMMNG00015009192) #35
Dolphin	MODERN SPECIES	1262															MFGE8 (ENSTTRG00000005772) #21	HAPLN3 (ENSTTRG00000005769) #22	ACAN (ENSTTRG00000005757) #23
Sperm whale	MODERN SPECIES	2	MESP2 (ENSPCTG00005002047) #9	MESP1 (ENSPCTG00005002059) #10	WDR93 (ENSPCTG00005002071) #11	PEX11A (ENSPCTG00005002095) #12	PLIN1 (ENSPCTG00005002115) #13	KIF7 (ENSPCTG00005002129) #14	ENSPCTG00005002137	TICRR (ENSPCTG00005002165) #15	ENSPCTG00005002271	RHCG (ENSPCTG00005002285) #16	POLG (ENSPCTG00005002329) #17	FANCI (ENSPCTG00005002443) #18	RLBP1 (ENSPCTG00005002599) #19	ABHD2 (ENSPCTG00005002623) #20	MFGE8 (ENSPCTG00005002670) #21	HAPLN3 (ENSPCTG00005002744) #22	ENSPCTG00005002760 #23	DMXL2 (ENSPCTG00005002810)	ENSPCTG00005002926	SCG3 (ENSPCTG00005002935)	LYSMD2 (ENSPCTG00005002952)	TMOD2 (ENSPCTG00005002994)	LEO1 (ENSPCTG00005003053)	ENSPCTG00005003075	GNB5 (ENSPCTG00005003132)	MYO5C (ENSPCTG00005003182)	ARPP19 (ENSPCTG00005003311)	ENSPCTG00005003611	FAM214A (ENSPCTG00005003629)	ONECUT1 (ENSPCTG00005003662)	WDR72 (ENSPCTG00005003691)
Blue whale	MODERN SPECIES	11	MESP2 (ENSBMSG00010003467) #9	MESP1 (ENSBMSG00010003481) #10	WDR93 (ENSBMSG00010003510) #11	PLIN1 (ENSBMSG00010003533) #13	ENSBMSG00010003544 #12	KIF7 (ENSBMSG00010003572) #14	ENSBMSG00010003599	TICRR (ENSBMSG00010003613) #15	RHCG (ENSBMSG00010003646) #16	POLG (ENSBMSG00010003677) #17	FANCI (ENSBMSG00010003711) #18	ENSBMSG00010003734	RLBP1 (ENSBMSG00010003747) #19	ABHD2 (ENSBMSG00010003762) #20	MFGE8 (ENSBMSG00010003855) #21	HAPLN3 (ENSBMSG00010003935) #22	ENSBMSG00010003952 #23	ENSBMSG00010003977	ENSBMSG00010003992	ISG20 (ENSBMSG00010004011) #24	AEN (ENSBMSG00010004029) #25	DET1 (ENSBMSG00010004044)	MRPS11 (ENSBMSG00010005607) #26	MRPL46 (ENSBMSG00010005625) #27	NTRK3 (ENSBMSG00010005722) #28	AGBL1 (ENSBMSG00010006518) #32	KLHL25 (ENSBMSG00010006567) #33	AKAP13 (ENSBMSG00010006632) #34	ENSBMSG00010006806	SV2B (ENSBMSG00010006824) #35	ENSBMSG00010006866
Pecora	ANCESTRAL SPECIES	18	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.b.a	ENSGT00950000182933.C.b.b.a.a	ENSGT00950000182933.C.b.a.b.b	ENSGT00950000182933.C.b.a.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27
Yarkand deer	MODERN SPECIES	4	MESP1 (ENSCHYG00000013751) #10	WDR93 (ENSCHYG00000013441) #11	PEX11A (ENSCHYG00000013352) #12	PLIN1 (ENSCHYG00000013247) #13	ENSCHYG00000013197	KIF7 (ENSCHYG00000012986) #14	TICRR (ENSCHYG00000012892) #15	RHCG (ENSCHYG00000012754) #16	POLG (ENSCHYG00000012478) #17	FANCI (ENSCHYG00000011622) #18	RLBP1 (ENSCHYG00000011493) #19	ABHD2 (ENSCHYG00000011415) #20	ENSCHYG00000011393	ENSCHYG00000011377	ENSCHYG00000011096 #21	HAPLN3 (ENSCHYG00000011015) #22	ACAN (ENSCHYG00000009082) #23	ENSCHYG00000008906	ENSCHYG00000008863	ENSCHYG00000008798	ENSCHYG00000008763	ENSCHYG00000008733	ENSCHYG00000008698	ENSCHYG00000008662	ENSCHYG00000008647	ENSCHYG00000008617	ENSCHYG00000008596	ENSCHYG00000008577	ISG20 (ENSCHYG00000008560) #24	AEN (ENSCHYG00000008539) #25	DET1 (ENSCHYG00000008489)
Percora_a	ANCESTRAL SPECIES	20	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.b	ENSGT00950000182933.C.b.b.a.b	ENSGT00950000182933.C.b.a.b.b	ENSGT00950000182933.C.b.a.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32
Bovidae	ANCESTRAL SPECIES	20	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.b	ENSGT00950000182933.C.b.b.a.b	ENSGT00950000182933.C.b.a.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33
Bovinae	ANCESTRAL SPECIES	19	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.b.a	ENSGT00950000182933.C.b.b.a.a	ENSGT00950000182933.C.b.a.a.b.a.a.b	ENSGT00950000182933.C.b.a.a.b.a.a.a	ENSGT00950000182933.C.b.a.b.b
Bos	ANCESTRAL SPECIES	18	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a.d #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.b.a.a	ENSGT00950000182933.C.b.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.b.a	ENSGT00950000182933.C.b.b.a.a	ENSGT00950000182933.C.b.a.a.b.a.a.b	ENSGT00950000182933.C.b.a.a.b.a.b.b	ENSGT00950000182933.C.b.a.a.b.a.a.a	ENSGT00940000162994.e.a	ENSGT00950000182933.C.b.a.b.b	ENSGT00950000182933.C.b.a.a.b.a.b.a.c	ENSGT00950000182933.C.b.a.a.b.b.a.a
Bos_a	ANCESTRAL SPECIES	10	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a.d #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.b.a.a	ENSGT00950000182933.C.b.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.b.a	ENSGT00950000182933.C.b.b.a.a	ENSGT00950000182933.C.b.a.a.b.a.a.b	ENSGT00950000182933.C.b.a.a.b.a.b.b	ENSGT00950000182933.C.b.a.a.b.a.a.a	ENSGT00940000162994.e.a	ENSGT00950000182933.C.b.a.b.b	ENSGT00950000182933.C.b.a.a.b.a.b.a.c	ENSGT00950000182933.C.b.a.a.b.b.a.a
Wild yak	MODERN SPECIES	435																HAPLN3 (ENSBMUG00000004254) #22	ENSBMUG00000004235 #23	ENSBMUG00000004183 #23
Domestic yak	MODERN SPECIES	8	ANPEP (ENSBGRG00000006001) #8	MESP2 (ENSBGRG00000005954) #9	MESP1 (ENSBGRG00000005945) #10	WDR93 (ENSBGRG00000005759) #11	ENSBGRG00000005653 #12	PLIN1 (ENSBGRG00000005613) #13	ENSBGRG00000005593	KIF7 (ENSBGRG00000005580) #14	TICRR (ENSBGRG00000005251) #15	RHCG (ENSBGRG00000005133) #16	POLG (ENSBGRG00000004700) #17	FANCI (ENSBGRG00000004285) #18	RLBP1 (ENSBGRG00000004191) #19	ABHD2 (ENSBGRG00000004063) #20	ENSBGRG00000003870 #21	HAPLN3 (ENSBGRG00000003781) #22	ACAN (ENSBGRG00000013726) #23	ENSBGRG00000013672	ENSBGRG00000013624	ENSBGRG00000013573	ENSBGRG00000013554	ENSBGRG00000013517	ENSBGRG00000013429	ENSBGRG00000013375	ENSBGRG00000013339	ENSBGRG00000013252	ENSBGRG00000013235	ENSBGRG00000013197	ENSBGRG00000013167	ENSBGRG00000013117	ENSBGRG00000013072
Bos_b	ANCESTRAL SPECIES	18	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a.d #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.b.a.a	ENSGT00950000182933.C.b.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.b.b.b	ENSGT00950000182933.C.b.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.b.b.a	ENSGT00950000182933.C.b.a.a.b.a.b.a.c	ENSGT00950000182933.C.b.a.a.b.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.a	ENSGT00950000182933.C.b.a.b.a.b	ENSGT00940000165826.j	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224
Hybrid Bos Indicus	MODERN SPECIES	13	ANPEP (ENSBIXG00005006254) #8	MESP2 (ENSBIXG00005019976) #9	MESP1 (ENSBIXG00005019991) #10	WDR93 (ENSBIXG00005020035) #11	PEX11A (ENSBIXG00005020081) #12	PLIN1 (ENSBIXG00005003299) #13	ENSBIXG00005020106	KIF7 (ENSBIXG00005003323) #14	TICRR (ENSBIXG00005007151) #15	RHCG (ENSBIXG00005020212) #16	POLG (ENSBIXG00005007341) #17	FANCI (ENSBIXG00005020571) #18	RLBP1 (ENSBIXG00005020625) #19	ABHD2 (ENSBIXG00005020711) #20	ENSBIXG00005020836 #21	HAPLN3 (ENSBIXG00005020872) #22	ACAN (ENSBIXG00005020930) #23	ENSBIXG00005020972	ENSBIXG00005020982	ENSBIXG00005020992	ENSBIXG00005020998	ENSBIXG00005005539	ENSBIXG00005021016	ENSBIXG00005003551	ENSBIXG00005021049	ENSBIXG00005021070	ENSBIXG00005021135	ENSBIXG00005021142	ENSBIXG00005021151	ENSBIXG00005021167	ENSBIXG00005021180
Cow	MODERN SPECIES	13	MESP2 (ENSBTAG00000027058) #9	MESP1 (ENSBTAG00000052215) #10	ENSBTAG00000055143 #11	WDR93 (ENSBTAG00000006141) #11	PEX11A (ENSBTAG00000006140) #12	PLIN1 (ENSBTAG00000015350) #13	ENSBTAG00000050851	KIF7 (ENSBTAG00000002440) #14	TICRR (ENSBTAG00000002418) #15	RHCG (ENSBTAG00000005471) #16	POLG (ENSBTAG00000009098) #17	FANCI (ENSBTAG00000009097) #18	RLBP1 (ENSBTAG00000033721) #19	ABHD2 (ENSBTAG00000019954) #20	MFGE8 (ENSBTAG00000003300) #21	HAPLN3 (ENSBTAG00000001740) #22	ACAN (ENSBTAG00000016158) #23	ENSBTAG00000048096	ENSBTAG00000053832	ENSBTAG00000001526	ENSBTAG00000004339	ENSBTAG00000054230	ENSBTAG00000002786	ENSBTAG00000045929	ENSBTAG00000001308	ENSBTAG00000050172	ENSBTAG00000048516	ISG20 (ENSBTAG00000014762) #24	AEN (ENSBTAG00000017632) #25	DET1 (ENSBTAG00000000967)	MRPS11 (ENSBTAG00000019831) #26
American bison	MODERN SPECIES	3078	IDH2 (ENSBBBG00000024391)	ZNF710 (ENSBBBG00000024401)	ARPIN (ENSBBBG00000024421)	AP3S2 (ENSBBBG00000024465) #7	ANPEP (ENSBBBG00000024511) #8	WDR93 (ENSBBBG00000024558) #11	PEX11A (ENSBBBG00000008039) #12	PLIN1 (ENSBBBG00000000257) #13	KIF7 (ENSBBBG00000000187) #14	RHCG (ENSBBBG00000006485) #16	POLG (ENSBBBG00000008229) #17	FANCI (ENSBBBG00000006654) #18	RLBP1 (ENSBBBG00000025152) #19	ABHD2 (ENSBBBG00000025173) #20	MFGE8 (ENSBBBG00000025271) #21	HAPLN3 (ENSBBBG00000008259) #22	ENSBBBG00000025298 #23	ENSBBBG00000025336 #23	ENSBBBG00000025362	ENSBBBG00000025372	ENSBBBG00000025375	ENSBBBG00000007786	ENSBBBG00000025442	ENSBBBG00000008269	ENSBBBG00000025471	ENSBBBG00000025502	ENSBBBG00000000084	ENSBBBG00000000079
Caprinae	ANCESTRAL SPECIES	22	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00950000182933.C.b.b.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.b.a	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.a.a.b	ENSGT00950000182933.C.b.a.a.b.a.b.a	ENSGT00950000182933.C.b.a.a.b.b.a.a	ENSGT00950000182933.C.b.a.a.b.b.a.b.a.b.a.a.a	ENSGT00950000182933.C.b.a.b.a.b	ENSGT00950000182933.C.b.a.a.b.b.a.b.b	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224
Goat	MODERN SPECIES	13	ANPEP (ENSCHIG00000010000) #8	MESP2 (ENSCHIG00000018743) #9	MESP1 (ENSCHIG00000008103) #10	WDR93 (ENSCHIG00000019646) #11	PEX11A (ENSCHIG00000022361) #12	PLIN1 (ENSCHIG00000024060) #13	ENSCHIG00000010195	KIF7 (ENSCHIG00000007739) #14	TICRR (ENSCHIG00000008062) #15	RHCG (ENSCHIG00000016640) #16	POLG (ENSCHIG00000010897) #17	FANCI (ENSCHIG00000001826) #18	RLBP1 (ENSCHIG00000017537) #19	ABHD2 (ENSCHIG00000022476) #20	MFGE8 (ENSCHIG00000013575) #21	HAPLN3 (ENSCHIG00000017237) #22	ACAN (ENSCHIG00000021027) #23	ENSCHIG00000004844	ENSCHIG00000019411	ENSCHIG00000007244	ENSCHIG00000014406	ENSCHIG00000003675	ENSCHIG00000015432	ENSCHIG00000013563	ENSCHIG00000014061	ENSCHIG00000021876	ENSCHIG00000025969	ISG20 (ENSCHIG00000014526) #24	AEN (ENSCHIG00000001561) #25	DET1 (ENSCHIG00000010346)	MRPS11 (ENSCHIG00000022002) #26
Siberian musk deer	MODERN SPECIES	1277	MESP1 (ENSMMSG00000023856) #10	WDR93 (ENSMMSG00000023867) #11	PEX11A (ENSMMSG00000023889) #12	PLIN1 (ENSMMSG00000023880) #13	KIF7 (ENSMMSG00000023899) #14	ENSMMSG00000023919	TICRR (ENSMMSG00000023935) #15	RHCG (ENSMMSG00000023950) #16	POLG (ENSMMSG00000023962) #17	FANCI (ENSMMSG00000023979) #18	RLBP1 (ENSMMSG00000024000) #19	ABHD2 (ENSMMSG00000024004) #20	ENSMMSG00000024014	ENSMMSG00000024023	MFGE8 (ENSMMSG00000024034) #21	HAPLN3 (ENSMMSG00000024046) #22	ACAN (ENSMMSG00000012051) #23	ENSMMSG00000012193	ENSMMSG00000012202	ENSMMSG00000012212	ENSMMSG00000012224	ENSMMSG00000012232	ENSMMSG00000012240	ENSMMSG00000012249	ENSMMSG00000012265	ENSMMSG00000012270	ENSMMSG00000012287	ENSMMSG00000012310	ENSMMSG00000012326	ENSMMSG00000012335	ENSMMSG00000012347
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Carnivora	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Caniformia	ANCESTRAL SPECIES	12	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Caniformia_b	ANCESTRAL SPECIES	15	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Ursidae	ANCESTRAL SPECIES	40	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026.d #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Ursus	DUPLICATION
Ursus	ANCESTRAL SPECIES	66	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026.d #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628.a #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28
American black bear	MODERN SPECIES	8839																ENSUAMG00000000476 #22
Polar bear	MODERN SPECIES	145	IDH2 (ENSUMAG00000007994)	ENSUMAG00000007991	AP3S2 (ENSUMAG00000007987) #7	ANPEP (ENSUMAG00000007118) #8	WDR93 (ENSUMAG00000006985) #11	PEX11A (ENSUMAG00000006980) #12	PLIN1 (ENSUMAG00000006973) #13	ENSUMAG00000006968 #14	TICRR (ENSUMAG00000006936) #15	RHCG (ENSUMAG00000006913) #16	POLG (ENSUMAG00000006805) #17	FANCI (ENSUMAG00000006372) #18	RLBP1 (ENSUMAG00000006295) #19	ABHD2 (ENSUMAG00000006292) #20	MFGE8 (ENSUMAG00000006287) #21	ENSUMAG00000006284 #22	ENSUMAG00000006277 #23	ENSUMAG00000006274 #24	ENSUMAG00000006271 #25	DET1 (ENSUMAG00000006268)	MRPS11 (ENSUMAG00000006261) #26	MRPL46 (ENSUMAG00000006255) #27	NTRK3 (ENSUMAG00000005866) #28
Ursus	ANCESTRAL SPECIES																	ENSGT00940000159628.b #22
American black bear	MODERN SPECIES	6501																ENSUAMG00000008573 #22	ACAN (ENSUAMG00000008574) #23
Giant Panda	MODERN SPECIES	19	AP3S2 (ENSAMEG00000002650) #7	ANPEP (ENSAMEG00000002535) #8	MESP2 (ENSAMEG00000028927) #9	MESP1 (ENSAMEG00000027144) #10	ENSAMEG00000026190 #11	PEX11A (ENSAMEG00000031216) #12	PLIN1 (ENSAMEG00000013172) #13	KIF7 (ENSAMEG00000013138) #14	ENSAMEG00000031007	TICRR (ENSAMEG00000013104) #15	RHCG (ENSAMEG00000013063) #16	POLG (ENSAMEG00000013009) #17	FANCI (ENSAMEG00000012957) #18	RLBP1 (ENSAMEG00000012944) #19	ABHD2 (ENSAMEG00000012924) #20	ENSAMEG00000012883 #22	ACAN (ENSAMEG00000012806) #23	ISG20 (ENSAMEG00000012803) #24	AEN (ENSAMEG00000028460) #25	DET1 (ENSAMEG00000012788)	MRPS11 (ENSAMEG00000012776) #26	NTRK3 (ENSAMEG00000012765) #28	ENSAMEG00000029939	AGBL1 (ENSAMEG00000030501) #32	ENSAMEG00000024598	KLHL25 (ENSAMEG00000020221) #33	ENSAMEG00000015847 #34	ENSAMEG00000015871 #35	ENSAMEG00000005664 #36	ST8SIA2 (ENSAMEG00000026931) #37	FAM174B (ENSAMEG00000026861)
Mustelinae	ANCESTRAL SPECIES	36	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a.b #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Ferret	MODERN SPECIES	260	ANPEP (ENSMPUG00000015751) #8	ENSMPUG00000015755	WDR93 (ENSMPUG00000015756) #11	ENSMPUG00000019759	PEX11A (ENSMPUG00000015757) #12	PLIN1 (ENSMPUG00000015758) #13	KIF7 (ENSMPUG00000015768) #14	TICRR (ENSMPUG00000015785) #15	RHCG (ENSMPUG00000015787) #16	POLG (ENSMPUG00000015789) #17	FANCI (ENSMPUG00000015791) #18	RLBP1 (ENSMPUG00000015795) #19	ABHD2 (ENSMPUG00000015798) #20	ENSMPUG00000015799	MFGE8 (ENSMPUG00000015809) #21	HAPLN3 (ENSMPUG00000015811) #22	ACAN (ENSMPUG00000015814) #23	ISG20 (ENSMPUG00000015816) #24	AEN (ENSMPUG00000015821) #25	DET1 (ENSMPUG00000015822)	MRPS11 (ENSMPUG00000015823) #26	MRPL46 (ENSMPUG00000015828) #27	ENSMPUG00000019760	NTRK3 (ENSMPUG00000015834) #28
American mink	MODERN SPECIES	81	AP3S2 (ENSNVIG00000017296) #7	ANPEP (ENSNVIG00000017322) #8	MESP1 (ENSNVIG00000017382) #10	WDR93 (ENSNVIG00000017392) #11	PEX11A (ENSNVIG00000017459) #12	PLIN1 (ENSNVIG00000017478) #13	KIF7 (ENSNVIG00000017514) #14	ENSNVIG00000017536	TICRR (ENSNVIG00000017550) #15	RHCG (ENSNVIG00000017639) #16	POLG (ENSNVIG00000017667) #17	FANCI (ENSNVIG00000017781) #18	RLBP1 (ENSNVIG00000017952) #19	ABHD2 (ENSNVIG00000017974) #20	MFGE8 (ENSNVIG00000017997) #21	HAPLN3 (ENSNVIG00000018003) #22	ENSNVIG00000018024 #23	ENSNVIG00000018061 #23	ISG20 (ENSNVIG00000018083) #24	AEN (ENSNVIG00000018093) #25	DET1 (ENSNVIG00000018109)	MRPS11 (ENSNVIG00000018121) #26	MRPL46 (ENSNVIG00000018140) #27	NTRK3 (ENSNVIG00000018197) #28	AGBL1 (ENSNVIG00000018618) #32	ENC2 (ENSNVIG00000018654) #33
Canidae	ANCESTRAL SPECIES	21	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00950000182895.a.a.a.a.a.a.a	ENSGT00940000155645 #28	ENSGT00390000013415.a.b.q.b	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37
Canis_lupus	ANCESTRAL SPECIES	23	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00950000182895.a.a.a.a.a.a.a	ENSGT00940000155645 #28	ENSGT00390000013415.a.b.q.b	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00390000006178.v	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36
Dingo	MODERN SPECIES	138	ANPEP (ENSCAFG00020016494) #8	MESP2 (ENSCAFG00020018337) #9	MESP1 (ENSCAFG00020018338) #10	WDR93 (ENSCAFG00020018339) #11	PEX11A (ENSCAFG00020018344) #12	PLIN1 (ENSCAFG00020018345) #13	ENSCAFG00020018349	KIF7 (ENSCAFG00020018353) #14	TICRR (ENSCAFG00020018451) #15	RHCG (ENSCAFG00020018471) #16	POLG (ENSCAFG00020018479) #17	FANCI (ENSCAFG00020018514) #18	RLBP1 (ENSCAFG00020018734) #19	ABHD2 (ENSCAFG00020018746) #20	MFGE8 (ENSCAFG00020018748) #21	HAPLN3 (ENSCAFG00020018752) #22	ACAN (ENSCAFG00020018766) #23	ISG20 (ENSCAFG00020018837) #24	AEN (ENSCAFG00020018839) #25	DET1 (ENSCAFG00020018845)	MRPS11 (ENSCAFG00020018868) #26	MRPL46 (ENSCAFG00020018871) #27	ENSCAFG00020018875	NTRK3 (ENSCAFG00020018900) #28	ENSCAFG00020018919	AGBL1 (ENSCAFG00020018957) #32	KLHL25 (ENSCAFG00020019009) #33	AKAP13 (ENSCAFG00020019058) #34	ENSCAFG00020019097	SV2B (ENSCAFG00020019115) #35	SLCO3A1 (ENSCAFG00020019152) #36
Red fox	MODERN SPECIES	1	ENSVVUG00000011126 #9	ENSVVUG00000011128 #10	WDR93 (ENSVVUG00000011139) #11	PEX11A (ENSVVUG00000011166) #12	PLIN1 (ENSVVUG00000011170) #13	ENSVVUG00000011178	KIF7 (ENSVVUG00000011186) #14	TICRR (ENSVVUG00000011314) #15	RHCG (ENSVVUG00000011374) #16	POLG (ENSVVUG00000011407) #17	FANCI (ENSVVUG00000011438) #18	RLBP1 (ENSVVUG00000011554) #19	ENSVVUG00000011559	ABHD2 (ENSVVUG00000011601) #20	MFGE8 (ENSVVUG00000011607) #21	HAPLN3 (ENSVVUG00000011619) #22	ACAN (ENSVVUG00000011685) #23	ISG20 (ENSVVUG00000012013) #24	AEN (ENSVVUG00000012020) #25	DET1 (ENSVVUG00000012036)	MRPS11 (ENSVVUG00000012046) #26	MRPL46 (ENSVVUG00000012054) #27	ENSVVUG00000012061	ENSVVUG00000012059	NTRK3 (ENSVVUG00000012090) #28	ENSVVUG00000012112	AGBL1 (ENSVVUG00000012159) #32	KLHL25 (ENSVVUG00000012193) #33	AKAP13 (ENSVVUG00000012249) #34	SV2B (ENSVVUG00000013022) #35	SLCO3A1 (ENSVVUG00000013095) #36
Felidae	ANCESTRAL SPECIES	1	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT01090000261680	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Panthera	ANCESTRAL SPECIES	31	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT01090000261680	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Tiger	MODERN SPECIES	112	ENSPTIG00000007869	AP3S2 (ENSPTIG00000007965) #7	ANPEP (ENSPTIG00000008472) #8	ENSPTIG00000000413	WDR93 (ENSPTIG00000009032) #11	PEX11A (ENSPTIG00000010681) #12	ENSPTIG00000011083 #13	ENSPTIG00000011088 #14	TICRR (ENSPTIG00000011133) #15	RHCG (ENSPTIG00000012772) #16	POLG (ENSPTIG00000012981) #17	FANCI (ENSPTIG00000014324) #18	RLBP1 (ENSPTIG00000017254) #19	ABHD2 (ENSPTIG00000017354) #20	ENSPTIG00000017689 #21	HAPLN3 (ENSPTIG00000018049) #22	ENSPTIG00000018270 #23	ISG20 (ENSPTIG00000018498) #24	AEN (ENSPTIG00000018966) #25	DET1 (ENSPTIG00000019253)	MRPS11 (ENSPTIG00000020641) #26	MRPL46 (ENSPTIG00000020791) #27	NTRK3 (ENSPTIG00000004577) #28	AGBL1 (ENSPTIG00000011215) #32	KLHL25 (ENSPTIG00000001967) #33	ENSPTIG00000012917 #34	ENSPTIG00000014990 #34	SV2B (ENSPTIG00000015483) #35	SLCO3A1 (ENSPTIG00000016559) #36	ST8SIA2 (ENSPTIG00000017433) #37	ENSPTIG00000017752
Panthera_a	ANCESTRAL SPECIES	33	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT01090000261680	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855.a #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
lion	MODERN SPECIES	6	ZNF710 (ENSPLOG00000020382)	ARPIN (ENSPLOG00000020397)	ENSPLOG00000020444 #7	ANPEP (ENSPLOG00000020496) #8	MESP2 (ENSPLOG00000020632) #9	MESP1 (ENSPLOG00000020658) #10	WDR93 (ENSPLOG00000020687) #11	PEX11A (ENSPLOG00000020785) #12	PLIN1 (ENSPLOG00000020813) #13	KIF7 (ENSPLOG00000020910) #14	ENSPLOG00000020984	TICRR (ENSPLOG00000020994) #15	RHCG (ENSPLOG00000021115) #16	POLG (ENSPLOG00000021165) #17	ENSPLOG00000021409 #18	HAPLN3 (ENSPLOG00000021908) #22	ENSPLOG00000021921 #23	ISG20 (ENSPLOG00000021939) #24	AEN (ENSPLOG00000021990) #25	DET1 (ENSPLOG00000022002)	MRPS11 (ENSPLOG00000022014) #26	MRPL46 (ENSPLOG00000022029) #27	NTRK3 (ENSPLOG00000022128) #28	ENSPLOG00000022322	AGBL1 (ENSPLOG00000022333) #32	KLHL25 (ENSPLOG00000022358) #33	AKAP13 (ENSPLOG00000022394) #34	SV2B (ENSPLOG00000000359) #35	SLCO3A1 (ENSPLOG00000000403) #36	ST8SIA2 (ENSPLOG00000000430) #37	FAM174B (ENSPLOG00000000451)
leopard	MODERN SPECIES	35	ANPEP (ENSPPRG00000024242) #8	MESP2 (ENSPPRG00000024134) #9	MESP1 (ENSPPRG00000023802) #10	WDR93 (ENSPPRG00000022782) #11	PEX11A (ENSPPRG00000000265) #12	PLIN1 (ENSPPRG00000000477) #13	ENSPPRG00000020818	KIF7 (ENSPPRG00000001457) #14	TICRR (ENSPPRG00000004833) #15	RHCG (ENSPPRG00000006129) #16	POLG (ENSPPRG00000007408) #17	FANCI (ENSPPRG00000021654) #18	RLBP1 (ENSPPRG00000022255) #19	ABHD2 (ENSPPRG00000024686) #20	MFGE8 (ENSPPRG00000024349) #21	HAPLN3 (ENSPPRG00000024024) #22	ENSPPRG00000023890 #23	ISG20 (ENSPPRG00000023560) #24	ENSPPRG00000023369	AEN (ENSPPRG00000022756) #25	DET1 (ENSPPRG00000001140)	MRPS11 (ENSPPRG00000001535) #26	MRPL46 (ENSPPRG00000002180) #27	NTRK3 (ENSPPRG00000013096) #28	AGBL1 (ENSPPRG00000015057) #32	KLHL25 (ENSPPRG00000021484) #33	ENSPPRG00000024557 #34	ENSPPRG00000024469 #34	SV2B (ENSPPRG00000024169) #35	SLCO3A1 (ENSPPRG00000022841) #36	ST8SIA2 (ENSPPRG00000000088) #37
Cat	MODERN SPECIES	237	ANPEP (ENSFCAG00000008974) #8	MESP2 (ENSFCAG00000043356) #9	MESP1 (ENSFCAG00000008973) #10	WDR93 (ENSFCAG00000008972) #11	PEX11A (ENSFCAG00000044187) #12	PLIN1 (ENSFCAG00000042547) #13	KIF7 (ENSFCAG00000013350) #14	ENSFCAG00000033324	TICRR (ENSFCAG00000013349) #15	RHCG (ENSFCAG00000012890) #16	POLG (ENSFCAG00000012888) #17	FANCI (ENSFCAG00000012886) #18	RLBP1 (ENSFCAG00000012884) #19	ABHD2 (ENSFCAG00000012882) #20	MFGE8 (ENSFCAG00000006622) #21	HAPLN3 (ENSFCAG00000034256) #22	ACAN (ENSFCAG00000031426) #23	ISG20 (ENSFCAG00000005151) #24	AEN (ENSFCAG00000023571) #25	DET1 (ENSFCAG00000014968)	MRPS11 (ENSFCAG00000014967) #26	MRPL46 (ENSFCAG00000014966) #27	NTRK3 (ENSFCAG00000014965) #28	AGBL1 (ENSFCAG00000011845) #32	KLHL25 (ENSFCAG00000030086) #33	AKAP13 (ENSFCAG00000029834) #34	SV2B (ENSFCAG00000022415) #35	ENSFCAG00000052132	SLCO3A1 (ENSFCAG00000003164) #36	ST8SIA2 (ENSFCAG00000028053) #37	FAM174B (ENSFCAG00000045406)
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00930000152882
Chiroptera	ANCESTRAL SPECIES	43	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855.d #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Microchiroptera	ANCESTRAL SPECIES	42	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.k #9	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00520000059044	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855.d #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Microbat	MODERN SPECIES	1736													ENSMLUG00000023707 #19	ABHD2 (ENSMLUG00000027502) #20	ENSMLUG00000029585 #21	HAPLN3 (ENSMLUG00000000456) #22	ACAN (ENSMLUG00000003385) #23
Greater horseshoe bat	MODERN SPECIES	20	ANPEP (ENSRFEG00010006504) #8	MESP2 (ENSRFEG00010006645) #9	MESP1 (ENSRFEG00010006682) #10	WDR93 (ENSRFEG00010006708) #11	PEX11A (ENSRFEG00010006769) #12	PLIN1 (ENSRFEG00010006827) #13	KIF7 (ENSRFEG00010006877) #14	ENSRFEG00010006917	TICRR (ENSRFEG00010006972) #15	RHCG (ENSRFEG00010007501) #16	POLG (ENSRFEG00010007606) #17	FANCI (ENSRFEG00010007715) #18	RLBP1 (ENSRFEG00010008473) #19	ABHD2 (ENSRFEG00010008513) #20	MFGE8 (ENSRFEG00010008596) #21	HAPLN3 (ENSRFEG00010008841) #22	ENSRFEG00010008871 #23	ISG20 (ENSRFEG00010008901) #24	AEN (ENSRFEG00010008945) #25	DET1 (ENSRFEG00010008995)	MRPS11 (ENSRFEG00010009068) #26	MRPL46 (ENSRFEG00010009099) #27	NTRK3 (ENSRFEG00010009240) #28	AGBL1 (ENSRFEG00010009486) #32	KLHL25 (ENSRFEG00010009518) #33	AKAP13 (ENSRFEG00010009623) #34	SV2B (ENSRFEG00010010164) #35	SLCO3A1 (ENSRFEG00010010224) #36	ST8SIA2 (ENSRFEG00010010423) #37	FAM174B (ENSRFEG00010010589)	CHD2 (ENSRFEG00010010750)
Equus	ANCESTRAL SPECIES	4	ENSGT00940000154876.b.k #8	ENSGT00970000193421.C.b.a #7	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00520000059044	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00930000152882
Donkey	MODERN SPECIES	11	MESP2 (ENSEASG00005029954) #9	ENSEASG00005015128 #8	ENSEASG00005032063 #7	MESP1 (ENSEASG00005026694) #10	WDR93 (ENSEASG00005015162) #11	PEX11A (ENSEASG00005029106) #12	PLIN1 (ENSEASG00005036082) #13	ENSEASG00005015200	ENSEASG00005015180 #14	RHCG (ENSEASG00005015218) #16	POLG (ENSEASG00005015232) #17	FANCI (ENSEASG00005015261) #18	RLBP1 (ENSEASG00005015350) #19	ABHD2 (ENSEASG00005015353) #20	MFGE8 (ENSEASG00005015354) #21	HAPLN3 (ENSEASG00005015355) #22	ENSEASG00005015358 #23	ISG20 (ENSEASG00005015360) #24	AEN (ENSEASG00005015361) #25	DET1 (ENSEASG00005015367)	MRPS11 (ENSEASG00005015369) #26	MRPL46 (ENSEASG00005032856) #27	NTRK3 (ENSEASG00005015377) #28	AGBL1 (ENSEASG00005015387) #32	KLHL25 (ENSEASG00005027542) #33	ENSEASG00005015400 #34	ENSEASG00005015427 #35	ENSEASG00005015429 #36	ST8SIA2 (ENSEASG00005015432) #37	FAM174B (ENSEASG00005033885)	ENSEASG00005023664
Horse	MODERN SPECIES		ENSECAG00000047741 #8	ENSECAG00000029256 #9	MESP1 (ENSECAG00000039551) #10	WDR93 (ENSECAG00000004446) #11	PEX11A (ENSECAG00000010027) #12	PLIN1 (ENSECAG00000013202) #13	KIF7 (ENSECAG00000019462) #14	ENSECAG00000019184	TICRR (ENSECAG00000021453) #15	RHCG (ENSECAG00000008418) #16	POLG (ENSECAG00000007781) #17	FANCI (ENSECAG00000003235) #18	RLBP1 (ENSECAG00000002415) #19	ABHD2 (ENSECAG00000011528) #20	MFGE8 (ENSECAG00000018875) #21	HAPLN3 (ENSECAG00000045036) #22	ACAN (ENSECAG00000007493) #23	ISG20 (ENSECAG00000019499) #24	ENSECAG00000051438	AEN (ENSECAG00000037942) #25	DET1 (ENSECAG00000021247)	MRPS11 (ENSECAG00000007319) #26	MRPL46 (ENSECAG00000007635) #27	NTRK3 (ENSECAG00000012510) #28	AGBL1 (ENSECAG00000007303) #32	ENSECAG00000004989	KLHL25 (ENSECAG00000009140) #33	AKAP13 (ENSECAG00000009706) #34	SV2B (ENSECAG00000015389) #35	ENSECAG00000045971	SLCO3A1 (ENSECAG00000013398) #36
Atlantogenata	ANCESTRAL SPECIES	2	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Afrotheria	ANCESTRAL SPECIES	20	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000167082	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Afrotheria_a	ANCESTRAL SPECIES	19	ENSGT00530000064251	ENSGT00970000193421.C.b #7	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.l #10	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000167082	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Elephant	MODERN SPECIES	285	AP3S2 (ENSLAFG00000020799) #7	ANPEP (ENSLAFG00000010600) #8	ENSLAFG00000021758 #10	MESP1 (ENSLAFG00000022195) #10	WDR93 (ENSLAFG00000003753) #11	PEX11A (ENSLAFG00000000556) #12	PLIN1 (ENSLAFG00000006093) #13	KIF7 (ENSLAFG00000006086) #14	TICRR (ENSLAFG00000006079) #15	RHCG (ENSLAFG00000015094) #16	POLG (ENSLAFG00000010216) #17	FANCI (ENSLAFG00000016287) #18	RLBP1 (ENSLAFG00000016281) #19	ABHD2 (ENSLAFG00000016278) #20	MFGE8 (ENSLAFG00000030365) #21	HAPLN3 (ENSLAFG00000009878) #22	ACAN (ENSLAFG00000009875) #23	ENSLAFG00000013130	AEN (ENSLAFG00000015182) #25	DET1 (ENSLAFG00000018651)	MRPS11 (ENSLAFG00000030086) #26	MRPL46 (ENSLAFG00000011931) #27	NTRK3 (ENSLAFG00000015226) #28	ENSLAFG00000009069 #32	KLHL25 (ENSLAFG00000010540) #33	ENSLAFG00000010529 #34	ENSLAFG00000025938 #34	SV2B (ENSLAFG00000002850) #35	SLCO3A1 (ENSLAFG00000013948) #36	ST8SIA2 (ENSLAFG00000013408) #37	FAM174B (ENSLAFG00000003629)
Hyrax	MODERN SPECIES	3007															MFGE8 (ENSPCAG00000008453) #21	ENSPCAG00000008419 #22
Tenrec	MODERN SPECIES	3680																HAPLN3 (ENSETEG00000019108) #22
Xenarthra	ANCESTRAL SPECIES	313					ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23
Armadillo	MODERN SPECIES	1232			WDR93 (ENSDNOG00000014350) #11	ENSDNOG00000047926 #12	PLIN1 (ENSDNOG00000039609) #13	KIF7 (ENSDNOG00000009983) #14	TICRR (ENSDNOG00000046928) #15	ENSDNOG00000000446	RHCG (ENSDNOG00000045517) #16	POLG (ENSDNOG00000025373) #17	FANCI (ENSDNOG00000034326) #18	RLBP1 (ENSDNOG00000036522) #19	ABHD2 (ENSDNOG00000043825) #20	ENSDNOG00000040987	MFGE8 (ENSDNOG00000003863) #21	HAPLN3 (ENSDNOG00000003857) #22	ACAN (ENSDNOG00000003837) #23
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.j #9	ENSGT00530000063712.a.a.i #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Opossum	MODERN SPECIES		AP3S2 (ENSMODG00000042381) #7	ANPEP (ENSMODG00000019534) #8	ENSMODG00000024701 #9	ENSMODG00000019538 #9	ENSMODG00000019542 #11	PEX11A (ENSMODG00000038591) #12	PLIN1 (ENSMODG00000019544) #13	KIF7 (ENSMODG00000019548) #14	ENSMODG00000024697 #15	RHCG (ENSMODG00000019555) #16	POLG (ENSMODG00000019564) #17	FANCI (ENSMODG00000019568) #18	RLBP1 (ENSMODG00000019571) #19	ABHD2 (ENSMODG00000019573) #20	ENSMODG00000019575 #21	HAPLN3 (ENSMODG00000019577) #22	ACAN (ENSMODG00000019581) #23	ISG20 (ENSMODG00000019583) #24	AEN (ENSMODG00000049468) #25	ENSMODG00000019587	MRPS11 (ENSMODG00000019589) #26	MRPL46 (ENSMODG00000019591) #27	NTRK3 (ENSMODG00000019593) #28	ENSMODG00000044545	ENSMODG00000024690	AGBL1 (ENSMODG00000019602) #32	KLHL25 (ENSMODG00000024689) #33	ENSMODG00000013360 #34	SV2B (ENSMODG00000013309) #35	SLCO3A1 (ENSMODG00000013193) #36	ENSMODG00000039966
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.j #9	ENSGT00530000063712.a.a.i #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Diprotodontia	ANCESTRAL SPECIES		ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.j #9	ENSGT00530000063712.a.a.i #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Diprotodontia_a	ANCESTRAL SPECIES	1	ENSGT00940000154876.b #8	ENSGT00530000063712.a.a.j #9	ENSGT00530000063712.a.a.i #9	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Common wonbat	MODERN SPECIES	581	ANPEP (ENSVURG00010007116) #8	ENSVURG00010007129 #9	ENSVURG00010007133 #11	ENSVURG00010007137 #11	PEX11A (ENSVURG00010007145) #12	PLIN1 (ENSVURG00010007156) #13	ENSVURG00010007177	KIF7 (ENSVURG00010007190) #14	ENSVURG00010007210 #15	RHCG (ENSVURG00010007220) #16	POLG (ENSVURG00010007251) #17	FANCI (ENSVURG00010007280) #18	RLBP1 (ENSVURG00010007367) #19	ABHD2 (ENSVURG00010007388) #20	MFGE8 (ENSVURG00010007399) #21	HAPLN3 (ENSVURG00010007410) #22	ACAN (ENSVURG00010007422) #23	ISG20 (ENSVURG00010007455) #24	AEN (ENSVURG00010007472) #25	DET1 (ENSVURG00010007489)	MRPS11 (ENSVURG00010007495) #26	MRPL46 (ENSVURG00010007499) #27	NTRK3 (ENSVURG00010007552) #28	ENSVURG00010007638	ENSVURG00010007660	AGBL1 (ENSVURG00010007705) #32	ENSVURG00010007764	KLHL25 (ENSVURG00010007790) #33	AKAP13 (ENSVURG00010007848) #34	ENSVURG00010008106	SV2B (ENSVURG00010008124) #35
koala	MODERN SPECIES	6	ENSPCIG00000006508	ANPEP (ENSPCIG00000006505) #8	ENSPCIG00000006504 #9	ENSPCIG00000006503 #9	ENSPCIG00000006497 #11	PEX11A (ENSPCIG00000006492) #12	ENSPCIG00000006489 #13	KIF7 (ENSPCIG00000006481) #14	TICRR (ENSPCIG00000006468) #15	RHCG (ENSPCIG00000006461) #16	POLG (ENSPCIG00000006439) #17	FANCI (ENSPCIG00000006421) #18	RLBP1 (ENSPCIG00000006417) #19	ABHD2 (ENSPCIG00000009069) #20	ENSPCIG00000006412 #21	HAPLN3 (ENSPCIG00000006411) #22	ISG20 (ENSPCIG00000006405) #24	AEN (ENSPCIG00000006401) #25	DET1 (ENSPCIG00000006396)	ENSPCIG00000006393 #26	MRPL46 (ENSPCIG00000006388) #27	NTRK3 (ENSPCIG00000006382) #28	AGBL1 (ENSPCIG00000033536) #32	ENSPCIG00000031489 #33	AKAP13 (ENSPCIG00000022532) #34	SV2B (ENSPCIG00000014407) #35	SLCO3A1 (ENSPCIG00000022283) #36	ST8SIA2 (ENSPCIG00000022312) #37	ENSPCIG00000022448	FAM174B (ENSPCIG00000022319)	CHD2 (ENSPCIG00000009417)
Tasmanian devil	MODERN SPECIES	1	ZNF710 (ENSSHAG00000024570)	ENSSHAG00000031900	ENSSHAG00000028069 #7	ANPEP (ENSSHAG00000013070) #8	ENSSHAG00000013251 #9	ENSSHAG00000013698 #11	PLIN1 (ENSSHAG00000013876) #13	KIF7 (ENSSHAG00000013999) #14	TICRR (ENSSHAG00000014111) #15	RHCG (ENSSHAG00000014529) #16	POLG (ENSSHAG00000015373) #17	FANCI (ENSSHAG00000015462) #18	RLBP1 (ENSSHAG00000028097) #19	ABHD2 (ENSSHAG00000015772) #20	ENSSHAG00000016335 #21	HAPLN3 (ENSSHAG00000016429) #22	ENSSHAG00000023231 #23	AEN (ENSSHAG00000017070) #25	DET1 (ENSSHAG00000000577)	MRPL46 (ENSSHAG00000021930) #27	ENSSHAG00000000058 #26	NTRK3 (ENSSHAG00000017249) #28	ENSSHAG00000024882	ENSSHAG00000029075 #32	ENSSHAG00000012628 #33	ENSSHAG00000012819 #34	ENSSHAG00000014779 #35	SLCO3A1 (ENSSHAG00000021592) #36	ST8SIA2 (ENSSHAG00000010546) #37	FAM174B (ENSSHAG00000024624)	CHD2 (ENSSHAG00000012513)
Platypus	MODERN SPECIES	16	SLCO3A1 (ENSOANG00000020373) #36	SV2B (ENSOANG00000002716) #35	AKAP13 (ENSOANG00000002718) #34	ENSOANG00000010018 #11	PEX11A (ENSOANG00000045901) #12	PLIN1 (ENSOANG00000000877) #13	ENSOANG00000000878	KIF7 (ENSOANG00000000880) #14	ENSOANG00000005832 #15	RHCG (ENSOANG00000005833) #16	POLG (ENSOANG00000020545) #17	FANCI (ENSOANG00000001858) #18	RLBP1 (ENSOANG00000046643) #19	ABHD2 (ENSOANG00000011714) #20	ENSOANG00000050482 #21	HAPLN3 (ENSOANG00000006382) #22	ENSOANG00000006381 #23	ISG20 (ENSOANG00000006380) #24	ENSOANG00000039687 #25	DET1 (ENSOANG00000012203)	ENSOANG00000043043 #26	MRPL46 (ENSOANG00000039735) #27	NTRK3 (ENSOANG00000021805) #28	AGBL1 (ENSOANG00000009682) #32	KLHL25 (ENSOANG00000009685) #33	ZFAND6 (ENSOANG00000002944)	ENSOANG00000047570	BCL2A1 (ENSOANG00000013017)	MTHFS (ENSOANG00000009193)	ENSOANG00000045582	SLC30A4 (ENSOANG00000006336)
Sauria	ANCESTRAL SPECIES	10	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
Lepidosauria	ANCESTRAL SPECIES	19	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i	ENSGT00730000111392	ENSGT00940000155888
Episquamata	ANCESTRAL SPECIES	9	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00530000063760.a	ENSGT00940000159506	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a	ENSGT00940000160363
Laterata	ANCESTRAL SPECIES	16	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00960000188661	ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00530000063760.a	ENSGT00940000159506	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a	ENSGT00940000160363
Argentine black and white tegu	MODERN SPECIES	46	MTHFS (ENSSMRG00000022318)	MINAR1 (ENSSMRG00000022317)	WDR93 (ENSSMRG00000022316) #11	PEX11A (ENSSMRG00000022315) #12	ENSSMRG00000022314 #13	ENSSMRG00000022313	ENSSMRG00000022312	KIF7 (ENSSMRG00000022311) #14	TICRR (ENSSMRG00000022310) #15	RHCG (ENSSMRG00000022309) #16	POLG (ENSSMRG00000022305) #17	FANCI (ENSSMRG00000022304) #18	RLBP1 (ENSSMRG00000022303) #19	ABHD2 (ENSSMRG00000022302) #20	MFGE8 (ENSSMRG00000022300) #21	HAPLN3 (ENSSMRG00000022299) #22	ACAN (ENSSMRG00000022298) #23	ENSSMRG00000022297 #24	DET1 (ENSSMRG00000022296)	MRPS11 (ENSSMRG00000022295) #26	MRPL46 (ENSSMRG00000022294) #27	NTRK3 (ENSSMRG00000022292) #28	ENSSMRG00000022291	AGBL1 (ENSSMRG00000022289) #32	KLHL25 (ENSSMRG00000022288) #33	AKAP13 (ENSSMRG00000022287) #34	ENSSMRG00000022286	PLEKHO2 (ENSSMRG00000022285)	PCSK6 (ENSSMRG00000022284)	SNRPA1 (ENSSMRG00000022283)	ENSSMRG00000022282
Common wall lizard	MODERN SPECIES	5	MINAR1 (ENSPMRG00000018878)	ENSPMRG00000018882 #11	PEX11A (ENSPMRG00000018892) #12	PLIN1 (ENSPMRG00000018901) #13	ENSPMRG00000018906	KIF7 (ENSPMRG00000018915) #14	TICRR (ENSPMRG00000018952) #15	RHCG (ENSPMRG00000018969) #16	TIMM9 (ENSPMRG00000018988)	ENSPMRG00000019049 #17	ENSPMRG00000019354 #17	FANCI (ENSPMRG00000019377) #18	RLBP1 (ENSPMRG00000019554) #19	ABHD2 (ENSPMRG00000019565) #20	MFGE8 (ENSPMRG00000019581) #21	HAPLN3 (ENSPMRG00000019594) #22	ACAN (ENSPMRG00000019604) #23	ENSPMRG00000019625 #24	ENSPMRG00000019628	DET1 (ENSPMRG00000019637)	MRPS11 (ENSPMRG00000019651) #26	NTRK3 (ENSPMRG00000019680) #28	AGBL1 (ENSPMRG00000019798) #32	KLHL25 (ENSPMRG00000019810) #33	ENSPMRG00000019815 #34	ENSPMRG00000019839 #34	PLEKHO2 (ENSPMRG00000019841)	PCSK6 (ENSPMRG00000019850)	ENSPMRG00000019864	SNRPA1 (ENSPMRG00000019866)	ENSPMRG00000012891
Toxicofera	ANCESTRAL SPECIES	15	ENSGT00530000063851.a	ENSGT00390000009995.o #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00970000195293	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645.c #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00530000063760.a	ENSGT00940000159506	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a	ENSGT00940000160363
Elapidae	ANCESTRAL SPECIES	12	ENSGT00530000063851.a	ENSGT00390000009995.o #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00970000195293	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645.c #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.e #34	ENSGT00530000063760.a	ENSGT00940000159506	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a	ENSGT00940000160363
Elapidae_a	ANCESTRAL SPECIES	37								ENSGT00940000159749 #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645.c #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.e #34	ENSGT00530000063760.a	ENSGT00940000159506	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a.u	ENSGT00940000160363
Acanthophiinae	ANCESTRAL SPECIES	37								ENSGT00940000159749.b #14	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645.c #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.e #34	ENSGT00530000063760.a	ENSGT00940000159506	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a.u	ENSGT00940000160363
Mainland tiger snake	MODERN SPECIES	163						ENSNSUG00000010839	ENSNSUG00000010838 #14	ENSNSUG00000010835 #15	RHCG (ENSNSUG00000010834) #16	POLG (ENSNSUG00000010830) #17	FANCI (ENSNSUG00000010827) #18	RLBP1 (ENSNSUG00000010826) #19	ABHD2 (ENSNSUG00000010824) #20	ENSNSUG00000010822	MFGE8 (ENSNSUG00000010821) #21	HAPLN3 (ENSNSUG00000010818) #22	ENSNSUG00000010815 #23	ISG20 (ENSNSUG00000010813) #24	ENSNSUG00000010811	DET1 (ENSNSUG00000010810)	MRPS11 (ENSNSUG00000010809) #26	MRPL46 (ENSNSUG00000010808) #27	NTRK3 (ENSNSUG00000010805) #28
Eastern brown snake	MODERN SPECIES	43							KIF7 (ENSPTXG00000005530) #14	ENSPTXG00000005522 #15	RHCG (ENSPTXG00000005519) #16	POLG (ENSPTXG00000005467) #17	FANCI (ENSPTXG00000005462) #18	RLBP1 (ENSPTXG00000005461) #19	ABHD2 (ENSPTXG00000005457) #20	ENSPTXG00000005454	MFGE8 (ENSPTXG00000005452) #21	HAPLN3 (ENSPTXG00000005451) #22	ENSPTXG00000005387 #23	ENSPTXG00000005384 #24	DET1 (ENSPTXG00000005381)	MRPS11 (ENSPTXG00000005380) #26	MRPL46 (ENSPTXG00000005378) #27	NTRK3 (ENSPTXG00000005357) #28	AGBL1 (ENSPTXG00000005356) #32	KLHL25 (ENSPTXG00000005355) #33	AKAP13 (ENSPTXG00000005277) #34	PLEKHO2 (ENSPTXG00000005273)	PCSK6 (ENSPTXG00000005043)	SNRPA1 (ENSPTXG00000005038)	ENSPTXG00000005036	CHSY1 (ENSPTXG00000005035)	LRRK1 (ENSPTXG00000005033)
Blue-lipped sea krait	MODERN SPECIES	3629																HAPLN3 (ENSLLTG00000002946) #22
Indian cobra	MODERN SPECIES	14	MINAR1 (ENSNNAG00000006019)	ENSNNAG00000006040 #11	ENSNNAG00000006092 #11	PEX11A (ENSNNAG00000006111) #12	ENSNNAG00000006123	ENSNNAG00000006144	KIF7 (ENSNNAG00000006160) #14	ENSNNAG00000006193	TICRR (ENSNNAG00000006222) #15	RHCG (ENSNNAG00000006298) #16	POLG (ENSNNAG00000006340) #17	FANCI (ENSNNAG00000006420) #18	RLBP1 (ENSNNAG00000006530) #19	ABHD2 (ENSNNAG00000006550) #20	MFGE8 (ENSNNAG00000006571) #21	HAPLN3 (ENSNNAG00000006593) #22	ENSNNAG00000006610 #23	ENSNNAG00000006632 #23	ENSNNAG00000006651 #24	DET1 (ENSNNAG00000006677)	MRPS11 (ENSNNAG00000006701) #26	MRPL46 (ENSNNAG00000006724) #27	NTRK3 (ENSNNAG00000006741) #28	AGBL1 (ENSNNAG00000006780) #32	KLHL25 (ENSNNAG00000006876) #33	AKAP13 (ENSNNAG00000006972) #34	PLEKHO2 (ENSNNAG00000007978)	PCSK6 (ENSNNAG00000008026)	SNRPA1 (ENSNNAG00000008089)	CHSY1 (ENSNNAG00000008149)	LRRK1 (ENSNNAG00000008221)
Lizard	MODERN SPECIES	158																ENSACAG00000000399 #22	ENSACAG00000041522
tuatara	MODERN SPECIES	1796	BCL2A1 (ENSSPUG00000012440)	MTHFS (ENSSPUG00000012416)	MINAR1 (ENSSPUG00000012401)	PEX11A (ENSSPUG00000012387) #12	ENSSPUG00000012381 #13	ENSSPUG00000012366	ENSSPUG00000012309 #15	ENSSPUG00000012264 #15	RHCG (ENSSPUG00000012244) #16	POLG (ENSSPUG00000012224) #17	FANCI (ENSSPUG00000012182) #18	RLBP1 (ENSSPUG00000012149) #19	ENSSPUG00000012138	ABHD2 (ENSSPUG00000012128) #20	MFGE8 (ENSSPUG00000012114) #21	HAPLN3 (ENSSPUG00000012102) #22	ACAN (ENSSPUG00000012070) #23	ISG20 (ENSSPUG00000012061) #24	ENSSPUG00000012053 #24	ENSSPUG00000012045	ENSSPUG00000012030	MRPS11 (ENSSPUG00000012009) #26	ENSSPUG00000012000 #27	ENSSPUG00000011993 #27	NTRK3 (ENSSPUG00000011968) #28	AGBL1 (ENSSPUG00000011923) #32	KLHL25 (ENSSPUG00000011909) #33	ENSSPUG00000011799 #34	ENSSPUG00000011777 #34	SV2B (ENSSPUG00000011667) #35	SLCO3A1 (ENSSPUG00000011382) #36
Archelosauria	ANCESTRAL SPECIES	13	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
Cryptodira	ANCESTRAL SPECIES	13	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i	ENSGT00730000111392
Testudinoidea	ANCESTRAL SPECIES	6	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.h #34	ENSGT00940000154146.a.g #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
Emydidae	ANCESTRAL SPECIES	21	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.h #34	ENSGT00940000154146.a.g #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
painted turtle	MODERN SPECIES	2428	TM6SF1 (ENSCPBG00000017600)	ENSCPBG00000017602	ENSCPBG00000017604	BNC1 (ENSCPBG00000017606)	SH3GL3 (ENSCPBG00000017611)	ENSCPBG00000017613	ADAMTSL3 (ENSCPBG00000017620)	SAXO2 (ENSCPBG00000017634)	EFL1 (ENSCPBG00000017638)	RHCG (ENSCPBG00000017644) #16	POLG (ENSCPBG00000017652) #17	FANCI (ENSCPBG00000017667) #18	RLBP1 (ENSCPBG00000017681) #19	ABHD2 (ENSCPBG00000017685) #20	MFGE8 (ENSCPBG00000017692) #21	HAPLN3 (ENSCPBG00000017697) #22	ACAN (ENSCPBG00000017775) #23	AEN (ENSCPBG00000017884) #25	DET1 (ENSCPBG00000017891)	MRPS11 (ENSCPBG00000017906) #26	MRPL46 (ENSCPBG00000017913) #27	NTRK3 (ENSCPBG00000017921) #28	AGBL1 (ENSCPBG00000017937) #32	KLHL25 (ENSCPBG00000017955) #33	AKAP13 (ENSCPBG00000017990) #34	SV2B (ENSCPBG00000018029) #35	SLCO3A1 (ENSCPBG00000018032) #36	ST8SIA2 (ENSCPBG00000018034) #37	ENSCPBG00000018035	FAM174B (ENSCPBG00000018037)	CHD2 (ENSCPBG00000018049)
Three-toed box turtle	MODERN SPECIES	27	BCL2A1 (ENSTMTG00000021238)	MINAR1 (ENSTMTG00000021244)	ENSTMTG00000021250 #11	PEX11A (ENSTMTG00000021254) #12	PLIN1 (ENSTMTG00000021274) #13	ENSTMTG00000021351	KIF7 (ENSTMTG00000021356) #14	ENSTMTG00000021368	TICRR (ENSTMTG00000021377) #15	RHCG (ENSTMTG00000021401) #16	POLG (ENSTMTG00000021431) #17	FANCI (ENSTMTG00000021446) #18	RLBP1 (ENSTMTG00000021473) #19	ABHD2 (ENSTMTG00000021481) #20	MFGE8 (ENSTMTG00000021486) #21	HAPLN3 (ENSTMTG00000021491) #22	ENSTMTG00000021495 #23	ENSTMTG00000021499 #23	ENSTMTG00000021505 #24	AEN (ENSTMTG00000021512) #25	DET1 (ENSTMTG00000021529)	MRPS11 (ENSTMTG00000021542) #26	MRPL46 (ENSTMTG00000021546) #27	NTRK3 (ENSTMTG00000021562) #28	AGBL1 (ENSTMTG00000021636) #32	AKAP13 (ENSTMTG00000021754) #34	SV2B (ENSTMTG00000022148) #35	SLCO3A1 (ENSTMTG00000022161) #36	ST8SIA2 (ENSTMTG00000022175) #37	ENSTMTG00000022182	CHD2 (ENSTMTG00000000844)
Testudinidae	ANCESTRAL SPECIES	3	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a.h #34	ENSGT00940000154146.a.g #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
Abingdon island giant tortoise	MODERN SPECIES	2360		MINAR1 (ENSCABG00000001166)	ENSCABG00000001169 #11	ENSCABG00000001171	PLIN1 (ENSCABG00000001176) #13	ENSCABG00000001236	KIF7 (ENSCABG00000001240) #14	ENSCABG00000001248	TICRR (ENSCABG00000001252) #15	RHCG (ENSCABG00000001283) #16	POLG (ENSCABG00000001318) #17	FANCI (ENSCABG00000001965) #18	RLBP1 (ENSCABG00000001969) #19	ABHD2 (ENSCABG00000001972) #20	MFGE8 (ENSCABG00000001974) #21	HAPLN3 (ENSCABG00000001984) #22	ENSCABG00000001985 #23	ENSCABG00000001986 #23	ISG20 (ENSCABG00000001989) #24	ENSCABG00000001990 #24	DET1 (ENSCABG00000001995)	MRPS11 (ENSCABG00000001998) #26	MRPL46 (ENSCABG00000002001) #27	NTRK3 (ENSCABG00000002008) #28	AGBL1 (ENSCABG00000002144) #32	KLHL25 (ENSCABG00000002148) #33	ENSCABG00000002149 #34
Goode s thornscrub tortoise	MODERN SPECIES	1	BCL2A1 (ENSGEVG00005007639)	MTHFS (ENSGEVG00005007625)	MINAR1 (ENSGEVG00005007597)	WDR93 (ENSGEVG00005007558) #11	PEX11A (ENSGEVG00005007541) #12	PLIN1 (ENSGEVG00005007347) #13	ENSGEVG00005007305	KIF7 (ENSGEVG00005007263) #14	TICRR (ENSGEVG00005007199) #15	RHCG (ENSGEVG00005007157) #16	POLG (ENSGEVG00005007095) #17	FANCI (ENSGEVG00005006939) #18	RLBP1 (ENSGEVG00005006885) #19	ABHD2 (ENSGEVG00005006855) #20	MFGE8 (ENSGEVG00005006808) #21	HAPLN3 (ENSGEVG00005006775) #22	ENSGEVG00005006669 #23	ENSGEVG00005006635 #24	AEN (ENSGEVG00005006625) #25	DET1 (ENSGEVG00005006608)	MRPS11 (ENSGEVG00005013843) #26	MRPL46 (ENSGEVG00005013817) #27	NTRK3 (ENSGEVG00005013021) #28	AGBL1 (ENSGEVG00005012751) #32	ENSGEVG00005012697	KLHL25 (ENSGEVG00005012681) #33	AKAP13 (ENSGEVG00005011940) #34	SV2B (ENSGEVG00005011622) #35	SLCO3A1 (ENSGEVG00005011319) #36	ST8SIA2 (ENSGEVG00005011218) #37	ENSGEVG00005011153
Chinese turtle	MODERN SPECIES	2248	BCL2A1 (ENSPSIG00000012557)	MTHFS (ENSPSIG00000012564)	MINAR1 (ENSPSIG00000012596)	ENSPSIG00000012700 #11	ENSPSIG00000012709 #11	PEX11A (ENSPSIG00000012713) #12	PLIN1 (ENSPSIG00000012746) #13	KIF7 (ENSPSIG00000013195) #14	TICRR (ENSPSIG00000013200) #15	RHCG (ENSPSIG00000013211) #16	POLG (ENSPSIG00000013454) #17	FANCI (ENSPSIG00000013597) #18	RLBP1 (ENSPSIG00000013780) #19	ABHD2 (ENSPSIG00000013928) #20	MFGE8 (ENSPSIG00000014099) #21	HAPLN3 (ENSPSIG00000014162) #22	ACAN (ENSPSIG00000014240) #23	AEN (ENSPSIG00000014281) #25	DET1 (ENSPSIG00000014572)	MRPS11 (ENSPSIG00000014576) #26	NTRK3 (ENSPSIG00000014583) #28
Archosauria	ANCESTRAL SPECIES	9	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
Aves	ANCESTRAL SPECIES	14	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00950000183119.b.i
Neognathae	ANCESTRAL SPECIES	11	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Galloanserae	ANCESTRAL SPECIES	10	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Anatidae	ANCESTRAL SPECIES	47	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Pink-footed goose	MODERN SPECIES	54	MINAR1 (ENSABRG00000021943)	ENSABRG00000021939 #11	PEX11A (ENSABRG00000021936) #12	PLIN1 (ENSABRG00000021934) #13	ENSABRG00000021933	ENSABRG00000021931	KIF7 (ENSABRG00000021930) #14	TICRR (ENSABRG00000021926) #15	ENSABRG00000021923	RHCG (ENSABRG00000021919) #16	POLG (ENSABRG00000021914) #17	FANCI (ENSABRG00000021911) #18	RLBP1 (ENSABRG00000021908) #19	ABHD2 (ENSABRG00000021903) #20	MFGE8 (ENSABRG00000021900) #21	HAPLN3 (ENSABRG00000021899) #22	ACAN (ENSABRG00000021894) #23	ENSABRG00000021890	AEN (ENSABRG00000021889) #25	DET1 (ENSABRG00000021888)	MRPS11 (ENSABRG00000021887) #26	MRPL46 (ENSABRG00000021884) #27	NTRK3 (ENSABRG00000021879) #28	AGBL1 (ENSABRG00000021873) #32	KLHL25 (ENSABRG00000021868) #33	AKAP13 (ENSABRG00000021863) #34	SV2B (ENSABRG00000021856) #35	SLCO3A1 (ENSABRG00000021850) #36	ST8SIA2 (ENSABRG00000021847) #37	FAM174B (ENSABRG00000021846)	CHD2 (ENSABRG00000021679)
Duck	MODERN SPECIES	3246																HAPLN3 (ENSAPLG00000029390) #22
Phasianidae	ANCESTRAL SPECIES	11	ENSGT01090000260003.a.b.b.a.a.a.a	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Japanese quail	MODERN SPECIES	1	BCL2A1 (ENSCJPG00005020321)	MTHFS (ENSCJPG00005020322)	MINAR1 (ENSCJPG00005020323)	PEX11A (ENSCJPG00005020324) #12	PLIN1 (ENSCJPG00005020325) #13	ENSCJPG00005020326	KIF7 (ENSCJPG00005020328) #14	ENSCJPG00005020329	TICRR (ENSCJPG00005020330) #15	RHCG (ENSCJPG00005020331) #16	POLG (ENSCJPG00005020336) #17	FANCI (ENSCJPG00005020338) #18	RLBP1 (ENSCJPG00005020385) #19	ABHD2 (ENSCJPG00005020386) #20	MFGE8 (ENSCJPG00005020387) #21	HAPLN3 (ENSCJPG00005020388) #22	ACAN (ENSCJPG00005020389) #23	ISG20 (ENSCJPG00005020390) #24	DET1 (ENSCJPG00005020392)	MRPS11 (ENSCJPG00005020393) #26	MRPL46 (ENSCJPG00005020394) #27	NTRK3 (ENSCJPG00005020395) #28	AGBL1 (ENSCJPG00005020399) #32	KLHL25 (ENSCJPG00005020402) #33	AKAP13 (ENSCJPG00005020403) #34	SV2B (ENSCJPG00005020404) #35	SLCO3A1 (ENSCJPG00005020405) #36	ST8SIA2 (ENSCJPG00005020407) #37	FAM174B (ENSCJPG00005020408)	CHD2 (ENSCJPG00005020410)	ENSCJPG00005020588
Phasianidae_b	ANCESTRAL SPECIES	11	ENSGT00940000160833	ENSGT01090000260003.a.b.b.a.a.a.a	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888
Turkey	MODERN SPECIES	3	FAH (ENSMGAG00000008278)	ZFAND6 (ENSMGAG00000008331)	BCL2A1 (ENSMGAG00000008347)	MTHFS (ENSMGAG00000008358)	MINAR1 (ENSMGAG00000008368)	PEX11A (ENSMGAG00000021722) #12	PLIN1 (ENSMGAG00000008379) #13	KIF7 (ENSMGAG00000008394) #14	ENSMGAG00000020104	TICRR (ENSMGAG00000008448) #15	RHCG (ENSMGAG00000008472) #16	FANCI (ENSMGAG00000008560) #18	RLBP1 (ENSMGAG00000008615) #19	ABHD2 (ENSMGAG00000008638) #20	MFGE8 (ENSMGAG00000008653) #21	HAPLN3 (ENSMGAG00000008681) #22	ACAN (ENSMGAG00000008691) #23	ISG20 (ENSMGAG00000008752) #24	DET1 (ENSMGAG00000008753)	MRPS11 (ENSMGAG00000008763) #26	NTRK3 (ENSMGAG00000008777) #28	AGBL1 (ENSMGAG00000008812) #32	KLHL25 (ENSMGAG00000016138) #33	AKAP13 (ENSMGAG00000008836) #34	SV2B (ENSMGAG00000008885) #35	SLCO3A1 (ENSMGAG00000008934) #36	ST8SIA2 (ENSMGAG00000008949) #37	CHD2 (ENSMGAG00000008966)	RGMA (ENSMGAG00000018555)	MCTP2 (ENSMGAG00000009089)	ARRDC4 (ENSMGAG00000009134)
Chicken	MODERN SPECIES	1	BCL2A1 (ENSGALG00010019825)	MTHFS (ENSGALG00010019833)	MINAR1 (ENSGALG00010019836)	PEX11A (ENSGALG00010019867) #12	ENSGALG00010019899	PLIN1 (ENSGALG00010020954) #13	KIF7 (ENSGALG00010019926) #14	TICRR (ENSGALG00010019948) #15	RHCG (ENSGALG00010019968) #16	ENSGALG00010016130	POLG (ENSGALG00010016150) #17	FANCI (ENSGALG00010016181) #18	RLBP1 (ENSGALG00010016199) #19	ABHD2 (ENSGALG00010020147) #20	MFGE8 (ENSGALG00010020155) #21	HAPLN3 (ENSGALG00010020166) #22	ACAN (ENSGALG00010020175) #23	ISG20 (ENSGALG00010015900) #24	ENSGALG00010015902	DET1 (ENSGALG00010020199)	MRPS11 (ENSGALG00010020206) #26	ENSGALG00010020217	MRPL46 (ENSGALG00010020224) #27	NTRK3 (ENSGALG00010020319) #28	AGBL1 (ENSGALG00010020345) #32	KLHL25 (ENSGALG00010020390) #33	AKAP13 (ENSGALG00010020117) #34	SV2B (ENSGALG00010020240) #35	SLCO3A1 (ENSGALG00010018504) #36	ST8SIA2 (ENSGALG00010018525) #37	FAM174B (ENSGALG00010018535)
Neognathae_b	ANCESTRAL SPECIES	13	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Passeriformes	ANCESTRAL SPECIES	12	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT01030000235343
Passeriformes_d	ANCESTRAL SPECIES	12	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT01030000235343
Flycatcher	MODERN SPECIES	1	ZFAND6 (ENSFALG00000005782)	BCL2A1 (ENSFALG00000022994)	MTHFS (ENSFALG00000026161)	WDR93 (ENSFALG00000010540) #11	PEX11A (ENSFALG00000010539) #12	PLIN1 (ENSFALG00000025427) #13	ENSFALG00000010532	ENSFALG00000023315	KIF7 (ENSFALG00000010530) #14	TICRR (ENSFALG00000010524) #15	RHCG (ENSFALG00000010513) #16	POLG (ENSFALG00000010505) #17	RLBP1 (ENSFALG00000010470) #19	FANCI (ENSFALG00000010491) #18	MFGE8 (ENSFALG00000010464) #21	HAPLN3 (ENSFALG00000029092) #22	ACAN (ENSFALG00000010446) #23	AEN (ENSFALG00000010440) #25	MRPS11 (ENSFALG00000025102) #26	DET1 (ENSFALG00000010439)	NTRK3 (ENSFALG00000010429) #28	AGBL1 (ENSFALG00000010421) #32	KLHL25 (ENSFALG00000015326) #33	AKAP13 (ENSFALG00000010402) #34	SV2B (ENSFALG00000010394) #35	SLCO3A1 (ENSFALG00000010386) #36	ST8SIA2 (ENSFALG00000010375) #37	FAM174B (ENSFALG00000010371)	CHD2 (ENSFALG00000010369)	ENSFALG00000023977	RGMA (ENSFALG00000010367)
Passeriformes_g	ANCESTRAL SPECIES	13	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT01030000235343
Passeroidea	ANCESTRAL SPECIES	12	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT00950000183112.a
Common canary	MODERN SPECIES	12	BCL2A1 (ENSSCAG00000005623)	MTHFS (ENSSCAG00000005626)	MINAR1 (ENSSCAG00000005629)	PEX11A (ENSSCAG00000005632) #12	PLIN1 (ENSSCAG00000005640) #13	ENSSCAG00000005644	KIF7 (ENSSCAG00000005649) #14	ENSSCAG00000005663	TICRR (ENSSCAG00000005667) #15	RHCG (ENSSCAG00000005679) #16	POLG (ENSSCAG00000005690) #17	FANCI (ENSSCAG00000005699) #18	RLBP1 (ENSSCAG00000005713) #19	ABHD2 (ENSSCAG00000005719) #20	MFGE8 (ENSSCAG00000005727) #21	HAPLN3 (ENSSCAG00000005741) #22	ENSSCAG00000005761	AEN (ENSSCAG00000005768) #25	DET1 (ENSSCAG00000005774)	MRPS11 (ENSSCAG00000005778) #26	MRPL46 (ENSSCAG00000005784) #27	NTRK3 (ENSSCAG00000005866) #28	AGBL1 (ENSSCAG00000006225) #32	KLHL25 (ENSSCAG00000006235) #33	AKAP13 (ENSSCAG00000006254) #34	SV2B (ENSSCAG00000006315) #35	SLCO3A1 (ENSSCAG00000006327) #36	ST8SIA2 (ENSSCAG00000006339) #37	FAM174B (ENSSCAG00000006353)	CHD2 (ENSSCAG00000006666)	RGMA (ENSSCAG00000007999)
Zebra finch	MODERN SPECIES	1	MTHFS (ENSTGUG00000008091)	MINAR1 (ENSTGUG00000008095)	WDR93 (ENSTGUG00000008101) #11	PEX11A (ENSTGUG00000029023) #12	PLIN1 (ENSTGUG00000027170) #13	ENSTGUG00000025896	KIF7 (ENSTGUG00000008118) #14	ENSTGUG00000020455	TICRR (ENSTGUG00000008125) #15	RHCG (ENSTGUG00000008130) #16	POLG (ENSTGUG00000008156) #17	FANCI (ENSTGUG00000008198) #18	RLBP1 (ENSTGUG00000008260) #19	ABHD2 (ENSTGUG00000008271) #20	MFGE8 (ENSTGUG00000008282) #21	HAPLN3 (ENSTGUG00000008292) #22	ACAN (ENSTGUG00000008302) #23	AEN (ENSTGUG00000008335) #25	ENSTGUG00000019297	DET1 (ENSTGUG00000008339)	ENSTGUG00000008345 #26	ENSTGUG00000008361	NTRK3 (ENSTGUG00000008364) #28	AGBL1 (ENSTGUG00000008390) #32	KLHL25 (ENSTGUG00000008405) #33	AKAP13 (ENSTGUG00000008410) #34	SV2B (ENSTGUG00000008436) #35	SLCO3A1 (ENSTGUG00000008476) #36	ST8SIA2 (ENSTGUG00000008518) #37	FAM174B (ENSTGUG00000021975)	CHD2 (ENSTGUG00000008540)
Medium ground finch	MODERN SPECIES	16	MTHFS (ENSGFOG00000001121)	MINAR1 (ENSGFOG00000001106)	ENSGFOG00000001095 #11	ENSGFOG00000001046 #11	PEX11A (ENSGFOG00000001039) #12	PLIN1 (ENSGFOG00000001027) #13	ENSGFOG00000001013	KIF7 (ENSGFOG00000000906) #14	TICRR (ENSGFOG00000000865) #15	RHCG (ENSGFOG00000000850) #16	POLG (ENSGFOG00000000834) #17	FANCI (ENSGFOG00000000779) #18	RLBP1 (ENSGFOG00000000758) #19	ABHD2 (ENSGFOG00000000745) #20	MFGE8 (ENSGFOG00000000651) #21	HAPLN3 (ENSGFOG00000000627) #22	ENSGFOG00000000619	ACAN (ENSGFOG00000000598) #23	AEN (ENSGFOG00000000580) #25	DET1 (ENSGFOG00000000564)	ENSGFOG00000000548 #26	MRPL46 (ENSGFOG00000000537) #27	NTRK3 (ENSGFOG00000000518) #28	AGBL1 (ENSGFOG00000000483) #32
Great tit	MODERN SPECIES	1	MTHFS (ENSPMJG00000000966)	MINAR1 (ENSPMJG00000000973)	WDR93 (ENSPMJG00000000978) #11	PEX11A (ENSPMJG00000000985) #12	PLIN1 (ENSPMJG00000001021) #13	ENSPMJG00000001051	KIF7 (ENSPMJG00000001055) #14	ENSPMJG00000001064	TICRR (ENSPMJG00000001068) #15	RHCG (ENSPMJG00000001077) #16	POLG (ENSPMJG00000001088) #17	FANCI (ENSPMJG00000001106) #18	RLBP1 (ENSPMJG00000001135) #19	ABHD2 (ENSPMJG00000001138) #20	MFGE8 (ENSPMJG00000001141) #21	HAPLN3 (ENSPMJG00000001152) #22	ACAN (ENSPMJG00000001206) #23	AEN (ENSPMJG00000001222) #25	DET1 (ENSPMJG00000001238)	MRPS11 (ENSPMJG00000001246) #26	ENSPMJG00000001331	NTRK3 (ENSPMJG00000001346) #28	AGBL1 (ENSPMJG00000001421) #32	KLHL25 (ENSPMJG00000001456) #33	AKAP13 (ENSPMJG00000001492) #34	SV2B (ENSPMJG00000002317) #35	SLCO3A1 (ENSPMJG00000002360) #36	ST8SIA2 (ENSPMJG00000002398) #37	CHD2 (ENSPMJG00000002477)	RGMA (ENSPMJG00000009581)	ENSPMJG00000009583
Neognathae_c	ANCESTRAL SPECIES	15	ENSGT00390000017791	ENSGT00530000063851.a	ENSGT00390000009995 #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00960000188661	ENSGT00390000005222 #15	ENSGT00950000182844.b.b.b #16	ENSGT00390000000453 #17	ENSGT00390000005855 #18	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00960000189327	ENSGT00940000161660 #25	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392
Golden eagle	MODERN SPECIES	21	MINAR1 (ENSACCG00020005128)	ENSACCG00020005137 #11	ENSACCG00020005147 #11	PEX11A (ENSACCG00020005152) #12	PLIN1 (ENSACCG00020005167) #13	ENSACCG00020005180	KIF7 (ENSACCG00020005187) #14	ENSACCG00020005206	ENSACCG00020005216 #15	RHCG (ENSACCG00020005229) #16	POLG (ENSACCG00020005247) #17	FANCI (ENSACCG00020005503) #18	RLBP1 (ENSACCG00020005814) #19	ABHD2 (ENSACCG00020005832) #20	MFGE8 (ENSACCG00020005861) #21	HAPLN3 (ENSACCG00020005887) #22	ACAN (ENSACCG00020005912) #23	ENSACCG00020005931 #24	ENSACCG00020005942	DET1 (ENSACCG00020005958)	MRPS11 (ENSACCG00020005973) #26	MRPL46 (ENSACCG00020005986) #27	NTRK3 (ENSACCG00020006023) #28	AGBL1 (ENSACCG00020006047) #32	KLHL25 (ENSACCG00020006073) #33	AKAP13 (ENSACCG00020006153) #34	SV2B (ENSACCG00020006242) #35	SLCO3A1 (ENSACCG00020006278) #36	ST8SIA2 (ENSACCG00020006314) #37	FAM174B (ENSACCG00020006321)	CHD2 (ENSACCG00020006864)
Kakapo	MODERN SPECIES	1	BCL2A1 (ENSSHBG00005011708)	MTHFS (ENSSHBG00005011698)	MINAR1 (ENSSHBG00005011681)	ENSSHBG00005011667 #11	PEX11A (ENSSHBG00005011647) #12	PLIN1 (ENSSHBG00005011632) #13	ENSSHBG00005011617	KIF7 (ENSSHBG00005011547) #14	TICRR (ENSSHBG00005011422) #15	RHCG (ENSSHBG00005011384) #16	POLG (ENSSHBG00005011316) #17	FANCI (ENSSHBG00005011250) #18	RLBP1 (ENSSHBG00005011208) #19	ABHD2 (ENSSHBG00005011175) #20	MFGE8 (ENSSHBG00005011131) #21	HAPLN3 (ENSSHBG00005011095) #22	ACAN (ENSSHBG00005011032) #23	ENSSHBG00005010985	AEN (ENSSHBG00005010956) #25	DET1 (ENSSHBG00005010927)	MRPS11 (ENSSHBG00005010891) #26	MRPL46 (ENSSHBG00005000589) #27	NTRK3 (ENSSHBG00005000586) #28	AGBL1 (ENSSHBG00005000578) #32	KLHL25 (ENSSHBG00005000576) #33	AKAP13 (ENSSHBG00005018827) #34	SV2B (ENSSHBG00005018770) #35	SLCO3A1 (ENSSHBG00005018751) #36	ST8SIA2 (ENSSHBG00005018742) #37	FAM174B (ENSSHBG00005018738)	CHD2 (ENSSHBG00005018022)
African ostrich	MODERN SPECIES	834	ZFAND6 (ENSSCUG00000013901)	BCL2A1 (ENSSCUG00000013900)	MTHFS (ENSSCUG00000013896)	MINAR1 (ENSSCUG00000013892)	WDR93 (ENSSCUG00000013887) #11	ENSSCUG00000013884 #13	ENSSCUG00000013883	KIF7 (ENSSCUG00000013881) #14	TICRR (ENSSCUG00000013877) #15	RHCG (ENSSCUG00000013875) #16	POLG (ENSSCUG00000013871) #17	FANCI (ENSSCUG00000013867) #18	RLBP1 (ENSSCUG00000013866) #19	ABHD2 (ENSSCUG00000013865) #20	MFGE8 (ENSSCUG00000013853) #21	HAPLN3 (ENSSCUG00000013844) #22	ACAN (ENSSCUG00000013837) #23	ENSSCUG00000013834	ISG20 (ENSSCUG00000013832) #24	DET1 (ENSSCUG00000013829)	MRPS11 (ENSSCUG00000013823) #26	MRPL46 (ENSSCUG00000013821) #27	NTRK3 (ENSSCUG00000013810) #28	AGBL1 (ENSSCUG00000013797) #32	KLHL25 (ENSSCUG00000013787) #33	AKAP13 (ENSSCUG00000013766) #34	SV2B (ENSSCUG00000013757) #35	SLCO3A1 (ENSSCUG00000013756) #36	ST8SIA2 (ENSSCUG00000013754) #37	ENSSCUG00000013752	FAM174B (ENSSCUG00000013749)
Australian saltwater crocodile	MODERN SPECIES	31	BCL2A1 (ENSCPRG00005016772)	MTHFS (ENSCPRG00005016774)	MINAR1 (ENSCPRG00005016781)	WDR93 (ENSCPRG00005016786) #11	PLIN1 (ENSCPRG00005016792) #13	ENSCPRG00005016799	KIF7 (ENSCPRG00005016810) #14	ENSCPRG00005016818	TICRR (ENSCPRG00005016822) #15	RHCG (ENSCPRG00005016845) #16	POLG (ENSCPRG00005016858) #17	FANCI (ENSCPRG00005016879) #18	RLBP1 (ENSCPRG00005016896) #19	ABHD2 (ENSCPRG00005016901) #20	MFGE8 (ENSCPRG00005016926) #21	HAPLN3 (ENSCPRG00005016971) #22	ACAN (ENSCPRG00005016979) #23	ENSCPRG00005016991	ENSCPRG00005016992 #24	DET1 (ENSCPRG00005017001)	MRPS11 (ENSCPRG00005017013) #26	MRPL46 (ENSCPRG00005017022) #27	NTRK3 (ENSCPRG00005017046) #28	AGBL1 (ENSCPRG00005017088) #32	KLHL25 (ENSCPRG00005017099) #33	AKAP13 (ENSCPRG00005017113) #34	SV2B (ENSCPRG00005017132) #35	SLCO3A1 (ENSCPRG00005017140) #36	ST8SIA2 (ENSCPRG00005017143) #37	ENSCPRG00005017144	CHD2 (ENSCPRG00005017236)
Anura	ANCESTRAL SPECIES		ENSGT00530000063712.a.a.a.b #9	ENSGT00530000063712.a.a.a.a #9	ENSGT01050000244841.A.a.b	ENSGT00390000009995.x #11	ENSGT00390000014273.a #12	ENSGT00950000182920.a #13	ENSGT00940000164158.B	ENSGT00940000159749 #14	ENSGT00390000005855 #18	ENSGT00390000000453 #17	ENSGT00950000182844.b.b.b #16	ENSGT00390000005222 #15	ENSGT00940000160026 #19	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00940000160781 #24	ENSGT00390000005224	ENSGT00390000016068 #26	ENSGT00390000015400 #27	ENSGT00940000155645 #28	ENSGT00940000160936 #32	ENSGT00950000182983.B.b #33	ENSGT00940000154146.a #34	ENSGT00950000182940.b.a.a #35	ENSGT01080000257410.A.f #36	ENSGT01030000234535.F.a #37	ENSGT00730000111392	ENSGT00940000155888	ENSGT00950000183112.a
Frog	MODERN SPECIES	3	gnrhr2 (ENSXETG00000017726)	ENSXETG00000030224 #11	ENSXETG00000049073 #11	pex11a (ENSXETG00000037575) #12	plin1 (ENSXETG00000017733) #13	rergl (ENSXETG00000038905)	kif7 (ENSXETG00000017738) #14	fanci (ENSXETG00000017742) #18	polg (ENSXETG00000017750) #17	ENSXETG00000046654	rhcg (ENSXETG00000017762) #16	ticrr (ENSXETG00000017769) #15	rlbp1 (ENSXETG00000017770) #19	abhd2 (ENSXETG00000046855) #20	mfge8 (ENSXETG00000017772) #21	hapln3 (ENSXETG00000007569) #22	ENSXETG00000038449 #23	kpna7 (ENSXETG00000007571) #23	ENSXETG00000043758	aen (ENSXETG00000007588) #24	det1 (ENSXETG00000007591)	ENSXETG00000038370	mrps11 (ENSXETG00000007593) #26	mrpl46 (ENSXETG00000007594) #27	ntrk3 (ENSXETG00000033787) #28	agbl1 (ENSXETG00000007616) #32	ENSXETG00000037120	ENSXETG00000046170	ENSXETG00000049059	pnliprp2 (ENSXETG00000007622) #33	akap13 (ENSXETG00000007623) #34
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000006969	KIF7 (ENSLLEG00000007023) #14	FANCI (ENSLLEG00000007224) #18	POLG (ENSLLEG00000007553) #17	ENSLLEG00000007730	ENSLLEG00000007744	ENSLLEG00000007757	ENSLLEG00000007768	RHCG (ENSLLEG00000007791) #16	ENSLLEG00000007864	TICRR (ENSLLEG00000007878) #15	RLBP1 (ENSLLEG00000007992) #19	ABHD2 (ENSLLEG00000008085) #20	MFGE8 (ENSLLEG00000008157) #21	ENSLLEG00000008243	HAPLN3 (ENSLLEG00000008252) #22	ENSLLEG00000008303 #23	ENSLLEG00000008440 #23	ENSLLEG00000008506	ENSLLEG00000008522 #24	ENSLLEG00000008561	DET1 (ENSLLEG00000008612)	ENSLLEG00000008665	MRPS11 (ENSLLEG00000008692) #26	MRPL46 (ENSLLEG00000008751) #27	ENSLLEG00000008791	NTRK3 (ENSLLEG00000008858) #28	ENSLLEG00000010021	ENSLLEG00000010033	AGBL1 (ENSLLEG00000010067) #32	ENSLLEG00000010448
Coelacanth	MODERN SPECIES	272	WDR93 (ENSLACG00000018143) #11	PEX11A (ENSLACG00000018139) #12	PLIN1 (ENSLACG00000018121) #13	si:dkeyp-59c12.1 (ENSLACG00000018114)	SEMA4B (ENSLACG00000018085)	IDH2 (ENSLACG00000017975)	ZNF710 (ENSLACG00000017953)	KIF7 (ENSLACG00000017850) #14	FANCI (ENSLACG00000017786) #18	POLG (ENSLACG00000017742) #17	RHCG (ENSLACG00000017383) #16	TICRR (ENSLACG00000017262) #15	rlbp1a (ENSLACG00000017193)	ABHD2 (ENSLACG00000017063) #20	MFGE8 (ENSLACG00000016909) #21	HAPLN3 (ENSLACG00000016863) #22	ACAN (ENSLACG00000016592) #23	CIB1 (ENSLACG00000016546)	GDPGP1 (ENSLACG00000016538)	TTLL13 (ENSLACG00000016486)	NGRN (ENSLACG00000016387)	HDDC3 (ENSLACG00000016369)	VPS33B (ENSLACG00000016287)	ENSLACG00000022664	UNC45A (ENSLACG00000016176)	ENSLACG00000016112	PRC1 (ENSLACG00000015990)	MAN2A2 (ENSLACG00000015860)	FES (ENSLACG00000015709)	FURIN (ENSLACG00000015086)	MFAP1 (ENSLACG00000014961)
Actinopterygii	ANCESTRAL SPECIES	18													ENSGT00940000164526	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00390000009048.a.a	ENSGT00940000158701	ENSGT01020000230648	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b	ENSGT00530000063834.f	ENSGT00390000018319.a.a.a.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b
Neopterygii	ANCESTRAL SPECIES	11	ENSGT00940000159320	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00950000182957.a.a.b	ENSGT00940000164669	ENSGT00940000160962	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526	ENSGT00950000182902.b.a #20	ENSGT00940000156049 #21	ENSGT00940000159628 #22	ENSGT00940000155971 #23	ENSGT00390000009048.a.a	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT01030000235224	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b	ENSGT00390000018319.a.a.a.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456
Osteoglossocephalai	ANCESTRAL SPECIES	10	ENSGT00940000165521.b	ENSGT00940000165692	ENSGT00940000164368.B	ENSGT00940000156178.B	ENSGT00390000003453.b.b	ENSGT00940000154489.B.a	ENSGT00530000063948.a	ENSGT00940000159107.i	ENSGT00940000164669	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628 #22	ENSGT00940000155971.d.a #23	ENSGT00390000009048.a.a	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT01030000235224	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b	ENSGT00390000018319.a.a.a.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	55												ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.b.a #23	ENSGT00390000009048.a.a.g	ENSGT01030000235224	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00940000171332	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT00940000169559	ENSGT01030000234623.a.b.b	ENSGT00390000008502
Otomorpha	ANCESTRAL SPECIES	298												ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.b.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.a #23	ENSGT00390000009048.a.a.g	ENSGT01030000235224	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00940000171332	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT00940000169559	ENSGT01030000234623.a.b.b	ENSGT00390000008502
Otophysi	ANCESTRAL SPECIES	202									ENSGT00940000165530.b	ENSGT01050000244857.A.a.b.f	ENSGT00940000161238.l	ENSGT00940000160745.c	ENSGT00940000164715.a	ENSGT01060000248595.b.a.b.a.n.b	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.a #23	ENSGT00940000155426	ENSGT00530000063981.b.d	ENSGT00940000160588	ENSGT00940000164990.d	ENSGT00940000154996.a.b.b	ENSGT00940000155491.d	ENSGT00940000159422.b	ENSGT00940000155399.a	ENSGT00940000157725.o	ENSGT00940000158086.a.a	ENSGT00940000155524.f	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a
Characiphysae	ANCESTRAL SPECIES	27						ENSGT00950000182839.B.b.a	ENSGT00940000153903.a.b.a.a	ENSGT00940000157462.C.c.a.l	ENSGT00940000157661.e.b	ENSGT01050000244857.A.a.b.f	ENSGT00940000161238.l	ENSGT00940000160745.c	ENSGT00940000164715.a	ENSGT01060000248595.b.a.b.a.n.b	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.a.c #23	ENSGT00940000155426	ENSGT00530000063981.b.d	ENSGT00940000160588	ENSGT00940000164990.d	ENSGT00940000154996.a.b.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00940000180790	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000159068	ENSGT00940000156718	ENSGT00530000063582.b
Channel catfish	MODERN SPECIES	19	PAMR1 (ENSIPUG00000022552)	ascl1b (ENSIPUG00000022550)	ENSIPUG00000022538	Rassf7 (ENSIPUG00000022527)	hrasb (ENSIPUG00000022502)	ENSIPUG00000022492	ENSIPUG00000022485	tsg101b (ENSIPUG00000022428)	BRSK2 (ENSIPUG00000022405)	ABTB2 (ENSIPUG00000022359)	B4GALNT4 (ENSIPUG00000022345)	ENSIPUG00000022314	igf2a (ENSIPUG00000022309)	CPT1A (ENSIPUG00000022263)	Edil3 (ENSIPUG00000022233) #21	HAPLN3 (ENSIPUG00000022227) #22	ACAN (ENSIPUG00000022176) #23	traf6 (ENSIPUG00000022164)	ENSIPUG00000022153	trpm5 (ENSIPUG00000022100)	cdkn1ca (ENSIPUG00000022095)	kcnq1.1 (ENSIPUG00000021227)	lingo1b (ENSIPUG00000021214)	Sin3a (ENSIPUG00000021061)	crabp1b (ENSIPUG00000021033)	slc25a44b (ENSIPUG00000021014)	RBPMS (ENSIPUG00000020981)	cpeb1 (ENSIPUG00000020960)	mtss1l (ENSIPUG00000020951)	ENSIPUG00000020923	dpy19l3 (ENSIPUG00000020870)
Characiphysae_b	ANCESTRAL SPECIES	28					ENSGT00940000165300.b.a.a.a	ENSGT00950000182839.B.b.a	ENSGT00940000153903.a.b.a.a	ENSGT00940000157462.C.c.a.l	ENSGT00940000157661.e.b	ENSGT01050000244857.A.a.b.f	ENSGT00940000161238.l	ENSGT00940000160745.c	ENSGT00940000164715.a	ENSGT01060000248595.b.a.b.a.n.b	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.a.c #23	ENSGT00940000155426	ENSGT00530000063981.b.d	ENSGT00940000160588	ENSGT00940000164990.d	ENSGT00940000154996.a.b.b	ENSGT00940000155491.d	ENSGT00940000159422.b	ENSGT00940000155399.a	ENSGT00940000158086.a.a	ENSGT00940000155524.f	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00940000180790
Characoidei	ANCESTRAL SPECIES	24						ENSGT00950000182839.B.b.a	ENSGT00940000153903.a.b.a.a	ENSGT00940000157462.C.c.a.l	ENSGT00940000157661.e.b	ENSGT01050000244857.A.a.b.f	ENSGT00940000161238.l	ENSGT00940000160745.c	ENSGT00940000164715.a	ENSGT01060000248595.b.a.b.a.n.b	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.a.c #23	ENSGT00940000155426	ENSGT00530000063981.b.d	ENSGT00940000160588	ENSGT00940000164990.d	ENSGT00940000154996.a.b.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00940000180790	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000159068	ENSGT00940000156718	ENSGT00530000063582.b
Red-bellied piranha	MODERN SPECIES	274										ENSPNAG00000015831	ENSPNAG00000015872	igf2a (ENSPNAG00000015901)	ENSPNAG00000015998	cpt1aa (ENSPNAG00000016057)	mfge8a (ENSPNAG00000016071) #21	HAPLN3 (ENSPNAG00000016115) #22	ENSPNAG00000016138	ENSPNAG00000016165 #23	ENSPNAG00000016325 #23	traf6 (ENSPNAG00000016363)	ENSPNAG00000003414	trpm5 (ENSPNAG00000016424)	cdkn1ca (ENSPNAG00000016430)	KCNQ1 (ENSPNAG00000016551)	lingo1b (ENSPNAG00000016558)	ENSPNAG00000016643	crabp1b (ENSPNAG00000016664)	slc25a44b (ENSPNAG00000016680)	rbpms2b (ENSPNAG00000004816)	cpeb1b (ENSPNAG00000016750)	ENSPNAG00000016828
Mexicana tetra	MODERN SPECIES	47	PAMR1 (ENSAMXG00000003809)	ENSAMXG00000025568	ENSAMXG00000028066	rassf7b (ENSAMXG00000007694)	hrasb (ENSAMXG00000033907)	ENSAMXG00000007690	BRSK2 (ENSAMXG00000007672)	ENSAMXG00000038973	ABTB2 (ENSAMXG00000007654)	B4GALNT4 (ENSAMXG00000007637)	ENSAMXG00000007622	igf2a (ENSAMXG00000039167)	ENSAMXG00000034619	cpt1aa (ENSAMXG00000007601)	mfge8a (ENSAMXG00000007594) #21	HAPLN3 (ENSAMXG00000007589) #22	ACAN (ENSAMXG00000007573) #23	traf6 (ENSAMXG00000007558)	ENSAMXG00000034197	trpm5 (ENSAMXG00000007541)	ENSAMXG00000043541	cdkn1ca (ENSAMXG00000029661)	kcnq1.1 (ENSAMXG00000007521)	lingo1b (ENSAMXG00000032291)	ENSAMXG00000019158	DPY19L3 (ENSAMXG00000006298)	ENSAMXG00000033989	ZNF507 (ENSAMXG00000006289)	tshz3b (ENSAMXG00000006284)	ZNF536 (ENSAMXG00000006281)	ENSAMXG00000033278
Electric eel	MODERN SPECIES	209	apip (ENSEEEG00000019247)	ENSEEEG00000019245	slc1a2a (ENSEEEG00000019243)	PAMR1 (ENSEEEG00000019239)	ascl1b (ENSEEEG00000019237)	rassf7b (ENSEEEG00000019235)	hrasb (ENSEEEG00000019231)	ENSEEEG00000019230	BRSK2 (ENSEEEG00000019229)	ABTB2 (ENSEEEG00000019122)	B4GALNT4 (ENSEEEG00000019120)	ENSEEEG00000019118	igf2a (ENSEEEG00000019117)	cpt1aa (ENSEEEG00000018794)	mfge8a (ENSEEEG00000018786) #21	HAPLN3 (ENSEEEG00000018780) #22	ENSEEEG00000018777 #23	traf6 (ENSEEEG00000018776)	trpm5 (ENSEEEG00000018762)	cdkn1ca (ENSEEEG00000018761)	KCNQ1 (ENSEEEG00000018760)
Clupeiformes	ANCESTRAL SPECIES	243									ENSGT00940000158881.k	ENSGT00940000157220.a	ENSGT00950000182957.a.b	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.b.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.a #23	ENSGT00390000009048.a.a.g	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00940000171332	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502	ENSGT00690000102225	ENSGT00390000011608
Atlantic herring	MODERN SPECIES	22	ENSCHAG00000012262	ENSCHAG00000012284	ENSCHAG00000012323	ENSCHAG00000012353	rhcgl1 (ENSCHAG00000012389) #16	fes (ENSCHAG00000012848)	furina (ENSCHAG00000013140)	ENSCHAG00000013331	ENSCHAG00000013747	ENSCHAG00000013828	ENSCHAG00000013851	slc39a1 (ENSCHAG00000013858)	rlbp1a (ENSCHAG00000013889)	abhd2a (ENSCHAG00000013906) #20	mfge8a (ENSCHAG00000014091) #21	HAPLN3 (ENSCHAG00000014253) #22	ACAN (ENSCHAG00000014265) #23	PPIP5K1 (ENSCHAG00000014524)	MAP1A (ENSCHAG00000017521)	tp53bp1 (ENSCHAG00000017528)	tubgcp4 (ENSCHAG00000017626)	cdkn2aip (ENSCHAG00000017701)	cart3 (ENSCHAG00000017709)	cartl (ENSCHAG00000017755)	iqgap1 (ENSCHAG00000017811)	ENSCHAG00000020062	ENSCHAG00000020131	SERINC4 (ENSCHAG00000020174)	hypk (ENSCHAG00000020186)	mfap1 (ENSCHAG00000020204)	hddc3 (ENSCHAG00000020271)
Euteleosteomorpha	ANCESTRAL SPECIES	51												ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.b.b #23	ENSGT00940000155971.d.b.b.a #23	ENSGT00390000009048.a.a.g	ENSGT01030000235224	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00940000171332	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502
Protacanthopterygii	ANCESTRAL SPECIES	2	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b	ENSGT00940000157397	ENSGT01030000234532.A.b	ENSGT00940000158347.z	ENSGT00940000159303	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00950000182902.b.a.d.b.b.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000155971.d.b.b.b #23	ENSGT00940000155971.d.b.b.a #23	ENSGT00390000009048.a.a.g	ENSGT00940000158701.a	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502	ENSGT00690000102225
Northern pike	MODERN SPECIES	1	FBN1 (ENSELUG00000003982)	dut (ENSELUG00000003934)	SLC12A1 (ENSELUG00000003881)	myef2 (ENSELUG00000003712)	slc24a5 (ENSELUG00000003686)	ENSELUG00000003669	sema6dl (ENSELUG00000003644)	cyp19a1a (ENSELUG00000003585)	gldn (ENSELUG00000003550)	dmxl2 (ENSELUG00000003509)	tnfaip8l3 (ENSELUG00000003472)	scg3 (ENSELUG00000003463)	lysmd2 (ENSELUG00000003440)	ABHD2 (ENSELUG00000003428) #20	mfge8a (ENSELUG00000003404) #21	HAPLN3 (ENSELUG00000003392) #22	ENSELUG00000003367 #23	PPIP5K1 (ENSELUG00000003283)	MAP1A (ENSELUG00000001322)	tp53bp1 (ENSELUG00000003079)	tubgcp4 (ENSELUG00000002994)	cdkn2aip (ENSELUG00000002933)	cart3 (ENSELUG00000002923)	ENSELUG00000002912	iqgap1 (ENSELUG00000002892)	CRTC3 (ENSELUG00000002859)	ENSELUG00000002828	SERINC4 (ENSELUG00000002815)	hypk (ENSELUG00000002778)	mfap1 (ENSELUG00000002791)	hddc3 (ENSELUG00000002773)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1622																ENSGT00940000159628.c.a #22	ENSGT00940000155971.d.b.b.a.e #23
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000159628.c.a #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000159628.c.a #22
Rainbow trout	MODERN SPECIES	27	dmxl2 (ENSOMYG00000050744)	ENSOMYG00000065757	ENSOMYG00000062594	ENSOMYG00000056762	ENSOMYG00000068677	ENSOMYG00000054986	ENSOMYG00000021422	ENSOMYG00000021377	ENSOMYG00000024561	scg3 (ENSOMYG00000062799)	ENSOMYG00000067291	ENSOMYG00000036795	ABHD2 (ENSOMYG00000051525) #20	MFGE8 (ENSOMYG00000036878) #21	HAPLN3 (ENSOMYG00000072981) #22	HAPLN3 (ENSOMYG00000067567) #22	ENSOMYG00000047979 #23	PPIP5K1 (ENSOMYG00000013610)	MAP1A (ENSOMYG00000077220)	ENSOMYG00000038278	tp53bp1 (ENSOMYG00000073866)	ENSOMYG00000051651	tubgcp4 (ENSOMYG00000057602)	cdkn2aip (ENSOMYG00000061453)	cart3 (ENSOMYG00000026943)	ENSOMYG00000058013	iqgap1 (ENSOMYG00000058323)	ENSOMYG00000074524	ENSOMYG00000057935	ENSOMYG00000018178	SERINC4 (ENSOMYG00000018192)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1621																ENSGT00940000159628.c.b.a #22	ENSGT00940000155971.d.b.b.a.f.a #23
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	556																ENSGT00940000159628.c.b.a.a #22	ENSGT00940000155971.d.b.b.a.f.a #23
Salmo	ANCESTRAL SPECIES	97													ENSGT00940000160054.k.b	ENSGT00950000182902.b.a.d.b.b.a.b.b #20	ENSGT00940000156049.b.c #21	ENSGT00940000159628.c.b.a.a #22	ENSGT00940000155971.d.b.b.a.f.a #23	ENSGT00390000009048.a.a.g.f	ENSGT00940000158701.a.e	ENSGT01020000230367.e.b.a.b.b.a.a.a.b.a.b.b	ENSGT00940000158376.v	ENSGT00390000018319.a.a.a.b.d.a.h	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456.cb	ENSGT01030000234623.a.b.b.e	ENSGT00390000008502.w	ENSGT00690000102225.t	ENSGT00390000011608.b.a.a	ENSGT00990000205513	ENSGT00940000156813.g
Atlantic salmon	MODERN SPECIES	18	myef2 (ENSSSAG00000073691)	slc24a5 (ENSSSAG00000117875)	ENSSSAG00000115789	SEMA6D (ENSSSAG00000052316)	ENSSSAG00000097760	cyp19a1a (ENSSSAG00000054809)	ENSSSAG00000089327	dmxl2 (ENSSSAG00000056088)	ENSSSAG00000056173	ENSSSAG00000115108	ENSSSAG00000056187	scg3 (ENSSSAG00000065139)	ENSSSAG00000099851	ABHD2 (ENSSSAG00000039338) #20	MFGE8 (ENSSSAG00000065106) #21	HAPLN3 (ENSSSAG00000105813) #22	ACAN (ENSSSAG00000086942) #23	PPIP5K1 (ENSSSAG00000048570)	MAP1A (ENSSSAG00000087668)	ENSSSAG00000114288	tp53bp1 (ENSSSAG00000118108)	ENSSSAG00000039206	tubgcp4 (ENSSSAG00000009250)	cdkn2aip (ENSSSAG00000107313)	cart (ENSSSAG00000020479)	ENSSSAG00000020766	ENSSSAG00000105069	iqgap1 (ENSSSAG00000006035)	ENSSSAG00000088697	ENSSSAG00000115211	SERINC4 (ENSSSAG00000076611)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000159628.c.b.a.a #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000159628.c.b.a.a #22
Chinook salmon	MODERN SPECIES	3	irx5a (ENSOTSG00005017128)	IRX5 (ENSOTSG00005017129)	lpcat2 (ENSOTSG00005017132)	mmp2 (ENSOTSG00005017318)	lpcat2 (ENSOTSG00005021076)	gli1 (ENSOTSG00005021454)	dtwd1 (ENSOTSG00005021937)	ENSOTSG00005021938	fgf7 (ENSOTSG00005021939)	ENSOTSG00005021943	ENSOTSG00005021948	CTXN2 (ENSOTSG00005021951)	ENSOTSG00005021952	ABHD2 (ENSOTSG00005012987) #20	mfge8a (ENSOTSG00005012988) #21	HAPLN3 (ENSOTSG00005012989) #22	ENSOTSG00005012990 #23	PPIP5K1 (ENSOTSG00005012992)	ENSOTSG00005013448	ENSOTSG00005013451	asb7 (ENSOTSG00005013453)	aldh1a3 (ENSOTSG00005013455)	chsy1 (ENSOTSG00005013458)	selenos (ENSOTSG00005013460)	ENSOTSG00005013462	PAX6 (ENSOTSG00005013463)	glceb (ENSOTSG00005013464)	myo9aa (ENSOTSG00005013468)	SCAMP2 (ENSOTSG00005013476)	BBS4 (ENSOTSG00005013478)	neo1a (ENSOTSG00005013502)
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000159628.c.b.a.b #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000159628.c.b.a.b #22
Atlantic salmon	MODERN SPECIES	896																ENSSSAG00000106675 #22
Huchen	MODERN SPECIES	2227									ENSHHUG00000036011	ENSHHUG00000036014	ENSHHUG00000036027	scg3 (ENSHHUG00000036041)	lysmd2 (ENSHHUG00000036053)	ABHD2 (ENSHHUG00000036057) #20	mfge8a (ENSHHUG00000036213) #21	ENSHHUG00000036229 #22
Salmoninae	ANCESTRAL SPECIES	1	ENSGT00940000157397.g	ENSGT01030000234532.A.b.q	ENSGT00940000158347.z	ENSGT00940000159303	ENSGT00840000129915.b.f	ENSGT00940000158020.d.h	ENSGT01040000240385.A.b.b.b.b.b.a.a	ENSGT00390000003488.a.a	ENSGT01040000240385.A.b.b.b.b.b.a.b.b	ENSGT01050000244843.d.f.a.a	ENSGT01050000244843.d.f.a.b.a	ENSGT00390000005488.g	ENSGT00940000160054.k.a	ENSGT00950000182902.b.a.d.b.b.a.b.b #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c.b.b #22	ENSGT00940000155971.d.b.b.a.f.b #23	ENSGT00390000009048.a.a.g	ENSGT00940000158701.a.f	ENSGT00390000011891.m.b	ENSGT00390000011891.m.a	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502	ENSGT00690000102225
Huchen	MODERN SPECIES	4270															MFGE8 (ENSHHUG00000046798) #21	HAPLN3 (ENSHHUG00000046801) #22	ENSHHUG00000046808 #23	ENSHHUG00000046815 #23
Salmoninae_a	ANCESTRAL SPECIES	1													ENSGT00940000160054.k.b	ENSGT00950000182902.b.a.d.b.b.a.b.b #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c.b.b #22	ENSGT00940000155971.d.b.b.a.e #23	ENSGT00390000009048.a.a.g	ENSGT00940000158701.a.f	ENSGT00390000011891.m.b.a	ENSGT00940000156677.m.b	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502	ENSGT00690000102225	ENSGT00390000011608.b.b
Salmo	ANCESTRAL SPECIES	147						ENSGT00840000129915.b.f.b	ENSGT00940000158020.d.h	ENSGT00390000000096.b.a.g.b.c	ENSGT01040000240385.A.b.b.b.b.b.a.b.a.a	ENSGT00390000003488.a.a.q	ENSGT01050000244843.d.f.a.b.a	ENSGT00390000005488.g	ENSGT00940000160054.k.a	ENSGT00950000182902.b.a.d.b.b.a.b.a #20	ENSGT00940000156049.b.d #21	ENSGT00940000159628.c.b.b #22	ENSGT00940000155971.d.b.b.a.f.b #23	ENSGT00390000009048.a.a.g.e	ENSGT00940000158701.a.f	ENSGT00390000011891.m.b.a	ENSGT00940000156677.m.b	ENSGT00940000158376.u	ENSGT00390000018319.a.a.a.b.d.a.g	ENSGT00390000018319.b.a	ENSGT00940000160456.bb	ENSGT01030000234623.a.b.b.f	ENSGT00390000008502.x	ENSGT00690000102225.s.a	ENSGT00390000011608.b.a.b
River trout	DUPLICATION
River trout	MODERN SPECIES	3	sema6dl (ENSSTUG00000027323)	ENSSTUG00000030795	ENSSTUG00000030807	cyp19a1a (ENSSTUG00000030814)	gldn (ENSSTUG00000030849)	dmxl2 (ENSSTUG00000030970)	ENSSTUG00000036980	ENSSTUG00000036983	tnfaip8l3 (ENSSTUG00000036990)	ENSSTUG00000036999	ENSSTUG00000037003	scg3 (ENSSTUG00000037029)	lysmd2 (ENSSTUG00000037042)	ABHD2 (ENSSTUG00000037063) #20	mfge8a (ENSSTUG00000037178) #21	HAPLN3 (ENSSTUG00000037279) #22	ACAN (ENSSTUG00000037301) #23	PPIP5K1 (ENSSTUG00000037447)	MAP1A (ENSSTUG00000041864)	tp53bp1 (ENSSTUG00000041906)	tubgcp4 (ENSSTUG00000042080)	cdkn2aip (ENSSTUG00000042426)	cart3 (ENSSTUG00000042440)	ENSSTUG00000042459	iqgap1 (ENSSTUG00000043221)	ENSSTUG00000049162	ENSSTUG00000049172	SERINC4 (ENSSTUG00000049192)	hypk (ENSSTUG00000049203)	mfap1 (ENSSTUG00000049206)	hddc3 (ENSSTUG00000049212)
River trout	MODERN SPECIES	21	slc24a5 (ENSSTUG00000024096)	myef2 (ENSSTUG00000024046)	CTXN2 (ENSSTUG00000024037)	SLC12A1 (ENSSTUG00000021248)	DUT (ENSSTUG00000021139)	cyp19a1a (ENSSTUG00000020100)	gldn (ENSSTUG00000020020)	dmxl2 (ENSSTUG00000019091)	ENSSTUG00000019022	tnfaip8l3 (ENSSTUG00000019014)	ENSSTUG00000019003	scg3 (ENSSTUG00000018985)	lysmd2 (ENSSTUG00000018977)	ABHD2 (ENSSTUG00000018761) #20	mfge8a (ENSSTUG00000018739) #21	HAPLN3 (ENSSTUG00000018713) #22	ENSSTUG00000018681 #23	PPIP5K1 (ENSSTUG00000018174)	MAP1A (ENSSTUG00000018129)	ENSSTUG00000018127	tp53bp1 (ENSSTUG00000017932)	tubgcp4 (ENSSTUG00000017566)	cdkn2aip (ENSSTUG00000017560)	cart3 (ENSSTUG00000017552)	iqgap1 (ENSSTUG00000005609)	ENSSTUG00000005223	ENSSTUG00000005214	SERINC4 (ENSSTUG00000005205)	hypk (ENSSTUG00000005199)	mfap1 (ENSSTUG00000005172)	ENSSTUG00000005153
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000097257	SEMA6D (ENSSSAG00000071415)	cyp19a1a (ENSSSAG00000066039)	ENSSSAG00000065917	dmxl2 (ENSSSAG00000065223)	ENSSSAG00000090877	ENSSSAG00000088855	ENSSSAG00000108595	ENSSSAG00000114040	ENSSSAG00000092505	ENSSSAG00000065169	scg3 (ENSSSAG00000107024)	lysm2 (ENSSSAG00000065121)	ABHD2 (ENSSSAG00000009179) #20	MFGE8 (ENSSSAG00000121641) #21	HAPLN3 (ENSSSAG00000068634) #22	ENSSSAG00000065086 #23	PPIP5K1 (ENSSSAG00000055806)	MAP1A (ENSSSAG00000039721)	tp53bp1 (ENSSSAG00000048027)	tubgcp4 (ENSSSAG00000047938)	cdkn2aip (ENSSSAG00000047927)	cart3 (ENSSSAG00000047899)	ENSSSAG00000068677	iqgap1 (ENSSSAG00000045637)	ENSSSAG00000040394	ENSSSAG00000121233	ENSSSAG00000122244	SERINC4 (ENSSSAG00000090535)	hypk (ENSSSAG00000006723)	mfap1 (ENSSSAG00000114694)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000159843.c	ENSGT00530000063301.a.b.g.b	ENSGT00490000043356.a.k.a	ENSGT00490000043356.a.k.b	ENSGT00950000183158.D.b.f.qb.n	ENSGT00390000018390.t.a	ENSGT00940000158030.q	ENSGT00940000154412.B.b.f	ENSGT00940000157397.g	ENSGT01030000234532.A.b.q.a.a	ENSGT00940000158347.z	ENSGT00940000159303	ENSGT00940000160054.k.b	ENSGT00950000182902.b.a.d.b.b.a.b.b #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c.b.b #22	ENSGT00940000155971.d.b.b.a.e #23	ENSGT00390000009048.a.a.g	ENSGT00940000158701.a.f	ENSGT00390000011891.m.b.a	ENSGT00390000011891.m.a	ENSGT00940000156677.m.a	ENSGT00940000156677.m.b	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.d.a.j	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000071483	cyp19a1a (ENSOMYG00000032044)	ENSOMYG00000032062	dmxl2 (ENSOMYG00000072296)	ENSOMYG00000053455	ENSOMYG00000036761	ENSOMYG00000059056	ENSOMYG00000060199	ENSOMYG00000041672	ENSOMYG00000075780	scg3 (ENSOMYG00000069317)	ENSOMYG00000055366	ENSOMYG00000062223	ABHD2 (ENSOMYG00000036826) #20	MFGE8 (ENSOMYG00000036955) #21	HAPLN3 (ENSOMYG00000036918) #22	ACAN (ENSOMYG00000050552) #23	ENSOMYG00000055725	PPIP5K1 (ENSOMYG00000037083)	MAP1A (ENSOMYG00000067214)	tp53bp1 (ENSOMYG00000054552)	ENSOMYG00000050596	tubgcp4 (ENSOMYG00000038401)	cdkn2aip (ENSOMYG00000038531)	cart3 (ENSOMYG00000038546)	ENSOMYG00000061417	iqgap1 (ENSOMYG00000038895)	ENSOMYG00000039636	ENSOMYG00000039647	SERINC4 (ENSOMYG00000039654)	ENSOMYG00000060288
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000055700	dmxl2 (ENSOMYG00000050744)	ENSOMYG00000065757	ENSOMYG00000062594	ENSOMYG00000056762	ENSOMYG00000068677	ENSOMYG00000054986	ENSOMYG00000021422	ENSOMYG00000021377	ENSOMYG00000024561	scg3 (ENSOMYG00000062799)	ENSOMYG00000067291	ENSOMYG00000036795	ABHD2 (ENSOMYG00000051525) #20	MFGE8 (ENSOMYG00000036878) #21	HAPLN3 (ENSOMYG00000072981) #22	HAPLN3 (ENSOMYG00000067567) #22	ENSOMYG00000047979 #23	PPIP5K1 (ENSOMYG00000013610)	MAP1A (ENSOMYG00000077220)	ENSOMYG00000038278	tp53bp1 (ENSOMYG00000073866)	ENSOMYG00000051651	tubgcp4 (ENSOMYG00000057602)	cdkn2aip (ENSOMYG00000061453)	cart3 (ENSOMYG00000026943)	ENSOMYG00000058013	iqgap1 (ENSOMYG00000058323)	ENSOMYG00000074524	ENSOMYG00000057935	ENSOMYG00000018178
Oncorhynchus_a	ANCESTRAL SPECIES	187									ENSGT01040000240385.A.b.b.b.b.b.a.b.a.b	ENSGT00390000003488.a.a.t	ENSGT01040000240385.A.b.b.b.b.b.a.b.b	ENSGT01050000244843.d.f.a.a	ENSGT00940000160054.k.a	ENSGT00950000182902.b.a.d.b.b.a.b.b #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c.b.b #22	ENSGT00940000155971.d.b.b.a.e #23	ENSGT00390000009048.a.a.g	ENSGT00940000158701.a.f	ENSGT00390000011891.m.a	ENSGT00940000156677.m.a
Coho salmon	MODERN SPECIES	32	DUT (ENSOKIG00005032347)	SECISBP2L (ENSOKIG00005034931)	cyp19a1a (ENSOKIG00005035287)	gldn (ENSOKIG00005036071)	dmxl2 (ENSOKIG00005036128)	ENSOKIG00005036733	TNFAIP8L3 (ENSOKIG00005036763)	ENSOKIG00005036779	ENSOKIG00005036799	ENSOKIG00005036812	scg3 (ENSOKIG00005036836)	ENSOKIG00005036848	lysmd2 (ENSOKIG00005036865)	ABHD2 (ENSOKIG00005036911) #20	mfge8a (ENSOKIG00005037116) #21	HAPLN3 (ENSOKIG00005037792) #22	ENSOKIG00005037828 #23	PPIP5K1 (ENSOKIG00005038068)	MAP1A (ENSOKIG00005041026)	ENSOKIG00005041195	tubgcp4 (ENSOKIG00005041319)	cdkn2aip (ENSOKIG00005042553)	cart3 (ENSOKIG00005042615)	ENSOKIG00005042651	ENSOKIG00005042661	iqgap1 (ENSOKIG00005043423)	ENSOKIG00005048984	ENSOKIG00005048994	SERINC4 (ENSOKIG00005049008)	hypk (ENSOKIG00005049011)	mfap1 (ENSOKIG00005049016)
Acanthomorphata	ANCESTRAL SPECIES	105												ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Cod	MODERN SPECIES	5	ENSGMOG00000033077	ENSGMOG00000031322	ENSGMOG00000029481	ENSGMOG00000025984	ENSGMOG00000033545	khk (ENSGMOG00000006425)	ENSGMOG00000006375	ENSGMOG00000012520	leo1 (ENSGMOG00000008688)	tmod2 (ENSGMOG00000008676)	lysmd2 (ENSGMOG00000024202)	scg3 (ENSGMOG00000009829)	ENSGMOG00000015191	ABHD2 (ENSGMOG00000015170) #20	MFGE8 (ENSGMOG00000015146) #21	HAPLN3 (ENSGMOG00000015131) #22	mibp2 (ENSGMOG00000015115)	bloc1s6 (ENSGMOG00000015099)	ENSGMOG00000029681	slc30a4 (ENSGMOG00000015081)	spata5l1 (ENSGMOG00000015056)	ENSGMOG00000015005	dtwd1 (ENSGMOG00000014979)	fgf7 (ENSGMOG00000032776)	COPS2 (ENSGMOG00000014935)	SECISBP2L (ENSGMOG00000014876)	ENSGMOG00000014610	ENSGMOG00000002703	ENSGMOG00000033882	ENSGMOG00000002628	ENSGMOG00000032103
Euacanthomorphacea	ANCESTRAL SPECIES	25												ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Pinecone sodierfish	MODERN SPECIES	17	SLC7A9 (ENSMMDG00005002915)	nudt19 (ENSMMDG00005002903)	RGS9BP (ENSMMDG00005002900)	zdhhc7 (ENSMMDG00005002851)	ENSMMDG00005002828	nip7 (ENSMMDG00005002813)	cdc42se2 (ENSMMDG00005002806)	irf1a (ENSMMDG00005002783)	ENSMMDG00005002770	ENSMMDG00005002736	nsmce1 (ENSMMDG00005012696)	slc39a1 (ENSMMDG00005012694)	ENSMMDG00005012693	abhd2a (ENSMMDG00005012688) #20	mfge8a (ENSMMDG00005011993) #21	HAPLN3 (ENSMMDG00005011980) #22	mibp2 (ENSMMDG00005011979)	bloc1s6 (ENSMMDG00005011978)	slc30a4 (ENSMMDG00005011976)	zgc:153317 (ENSMMDG00005011975)	spata5l1 (ENSMMDG00005011971)	ENSMMDG00005009953	dtwd1 (ENSMMDG00005009923)	fgf7 (ENSMMDG00005009919)	ENSMMDG00005009917	cops2 (ENSMMDG00005009909)	SECISBP2L (ENSMMDG00005009891)	ENSMMDG00005009880	FBN1 (ENSMMDG00005009577)	dut (ENSMMDG00005009548)	SLC12A1 (ENSMMDG00005009457)
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT01030000235447	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT01030000235447	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00940000159628.c #22
Bicolor damselfish	MODERN SPECIES	96															mfge8a (ENSSPAG00000019637) #21	HAPLN3 (ENSSPAG00000019659) #22
Cichlidae	ANCESTRAL SPECIES	11	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000000223	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000000223	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234534.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00940000180588	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390
Zebra mbuna	MODERN SPECIES	1091	UACA (ENSMZEG00005012517)	ENSMZEG00005012470	ENSMZEG00005012461	PIAS1 (ENSMZEG00005012429)	skor1a (ENSMZEG00005012422)	map2k5 (ENSMZEG00005012392)	SMAD3 (ENSMZEG00005012369)	smad6a (ENSMZEG00005012354)	tmem208 (ENSMZEG00005012330)	ENSMZEG00005012309	STOM (ENSMZEG00005012297)	slc39a1 (ENSMZEG00005012287)	ENSMZEG00005012269	abhd2a (ENSMZEG00005012251) #20	mfge8a (ENSMZEG00005012239) #21	HAPLN3 (ENSMZEG00005012228) #22	mibp2 (ENSMZEG00005012218)	ENSMZEG00005012203	bloc1s6 (ENSMZEG00005012197)	slc30a4 (ENSMZEG00005012190)	zgc:153317 (ENSMZEG00005012182)	spata5l1 (ENSMZEG00005012171)	ENSMZEG00005012137	dtwd1 (ENSMZEG00005012129)	fgf7 (ENSMZEG00005012118)	ENSMZEG00005012113	cops2 (ENSMZEG00005012100)	SECISBP2L (ENSMZEG00005012079)	ENSMZEG00005012071	ENSMZEG00005012063	sult2st3 (ENSMZEG00005012055)
Eastern happy	MODERN SPECIES		UACA (ENSACLG00000015543)	ENSACLG00000015610	ENSACLG00000015720	PIAS1 (ENSACLG00000015737)	skor1a (ENSACLG00000015826)	map2k5 (ENSACLG00000015946)	SMAD3 (ENSACLG00000016303)	smad6a (ENSACLG00000016319)	tmem208 (ENSACLG00000016345)	STOM (ENSACLG00000016358)	ENSACLG00000016386	slc39a1 (ENSACLG00000016397)	ENSACLG00000016438	abhd2a (ENSACLG00000016471) #20	mfge8a (ENSACLG00000016536) #21	HAPLN3 (ENSACLG00000016603) #22	mibp2 (ENSACLG00000016621)	bloc1s6 (ENSACLG00000016660)	slc30a4 (ENSACLG00000016688)	zgc:153317 (ENSACLG00000016750)	spata5l1 (ENSACLG00000016764)	ENSACLG00000016792	dtwd1 (ENSACLG00000016942)	fgf7 (ENSACLG00000016954)	ENSACLG00000016973	cops2 (ENSACLG00000016989)	SECISBP2L (ENSACLG00000017020)	ENSACLG00000017066	FBN1 (ENSACLG00000017109)	dut (ENSACLG00000017332)	SLC12A1 (ENSACLG00000017351)
P. nyererei	MODERN SPECIES	479				PIAS1 (ENSPNYG00000007731)	skor1a (ENSPNYG00000007786)	map2k5 (ENSPNYG00000007807)	SMAD3 (ENSPNYG00000007902)	smad6a (ENSPNYG00000007929)	tmem208 (ENSPNYG00000007964)	STOM (ENSPNYG00000008024)	ENSPNYG00000008039	slc39a1 (ENSPNYG00000008054)	ENSPNYG00000008122	abhd2a (ENSPNYG00000008142) #20	mfge8a (ENSPNYG00000008173) #21	HAPLN3 (ENSPNYG00000008243) #22	mibp2 (ENSPNYG00000008446)	bloc1s6 (ENSPNYG00000008469)	slc30a4 (ENSPNYG00000008509)	spata5l1 (ENSPNYG00000008552)	zgc:153317 (ENSPNYG00000008598)	ENSPNYG00000008639	dtwd1 (ENSPNYG00000008711)	fgf7 (ENSPNYG00000008718)	cops2 (ENSPNYG00000008742)	SECISBP2L (ENSPNYG00000008760)	ENSPNYG00000008784	FBN1 (ENSPNYG00000008831)	dut (ENSPNYG00000009044)	SLC12A1 (ENSPNYG00000009465)	CTXN2 (ENSPNYG00000010863)
Burton s mouthbrooder	MODERN SPECIES	530				ENSHBUG00000012004	skor1a (ENSHBUG00000012018)	map2k5 (ENSHBUG00000012063)	SMAD3 (ENSHBUG00000012089)	smad6a (ENSHBUG00000012111)	tmem208 (ENSHBUG00000012128)	ENSHBUG00000012137	STOM (ENSHBUG00000012152)	slc39a1 (ENSHBUG00000012168)	ENSHBUG00000012195	abhd2a (ENSHBUG00000000339) #20	mfge8a (ENSHBUG00000012251) #21	HAPLN3 (ENSHBUG00000012266) #22	mibp2 (ENSHBUG00000012273)	bloc1s6 (ENSHBUG00000012295)	slc30a4 (ENSHBUG00000012324)	zgc:153317 (ENSHBUG00000012341)	spata5l1 (ENSHBUG00000012355)	ENSHBUG00000012430	dtwd1 (ENSHBUG00000012442)	fgf7 (ENSHBUG00000012453)	cops2 (ENSHBUG00000012467)	SECISBP2L (ENSHBUG00000012549)	ENSHBUG00000012568	FBN1 (ENSHBUG00000012766)	dut (ENSHBUG00000012784)	SLC12A1 (ENSHBUG00000015725)	CTXN2 (ENSHBUG00000015828)
Lyretail cichlid	MODERN SPECIES	320	ENSNBRG00000021781	ENSNBRG00000021798	PIAS1 (ENSNBRG00000021813)	skor1a (ENSNBRG00000021849)	map2k5 (ENSNBRG00000021875)	SMAD3 (ENSNBRG00000021957)	smad6a (ENSNBRG00000022000)	tmem208 (ENSNBRG00000022070)	STOM (ENSNBRG00000022084)	ENSNBRG00000022097	slc39a1 (ENSNBRG00000022103)	ENSNBRG00000022117	ENSNBRG00000022124	abhd2a (ENSNBRG00000022158) #20	mfge8a (ENSNBRG00000022184) #21	HAPLN3 (ENSNBRG00000022217) #22	mibp2 (ENSNBRG00000022296)	bloc1s6 (ENSNBRG00000022319)	slc30a4 (ENSNBRG00000022345)	zgc:153317 (ENSNBRG00000022374)	spata5l1 (ENSNBRG00000022393)	ENSNBRG00000022427	dtwd1 (ENSNBRG00000022453)	fgf7 (ENSNBRG00000022464)	cops2 (ENSNBRG00000022478)	SECISBP2L (ENSNBRG00000022500)	ENSNBRG00000022537	ENSNBRG00000022546	FBN1 (ENSNBRG00000022572)	SLC12A1 (ENSNBRG00000022889)	CTXN2 (ENSNBRG00000023580)
Nile tilapia	MODERN SPECIES		ENSONIG00000013241	ENSONIG00000013250	PIAS1 (ENSONIG00000013251)	ENSONIG00000027793	skor1a (ENSONIG00000013261)	map2k5 (ENSONIG00000036681)	SMAD3 (ENSONIG00000013271)	smad6a (ENSONIG00000013280)	tmem208 (ENSONIG00000013283)	ENSONIG00000042582	STOM (ENSONIG00000020887)	slc39a1 (ENSONIG00000013286)	ENSONIG00000013288	abhd2a (ENSONIG00000013290) #20	mfge8a (ENSONIG00000013296) #21	HAPLN3 (ENSONIG00000013302) #22	mibp2 (ENSONIG00000013305)	slc30a4 (ENSONIG00000013317)	bloc1s6 (ENSONIG00000013314)	zgc:153317 (ENSONIG00000038594)	spata5l1 (ENSONIG00000013321)	ENSONIG00000013323	dtwd1 (ENSONIG00000013335)	fgf7 (ENSONIG00000013338)	cops2 (ENSONIG00000013341)	SECISBP2L (ENSONIG00000013343)	ENSONIG00000030018	FBN1 (ENSONIG00000013348)	dut (ENSONIG00000013362)	SLC12A1 (ENSONIG00000013365)	CTXN2 (ENSONIG00000020888)
Midas cichlid	MODERN SPECIES	671												ENSACIG00000019333	ENSACIG00000019338	ABHD2 (ENSACIG00000019350) #20	mfge8a (ENSACIG00000019394) #21	HAPLN3 (ENSACIG00000019610) #22	mibp2 (ENSACIG00000019799)	bloc1s6 (ENSACIG00000019824)	slc30a4 (ENSACIG00000019843)	zgc:153317 (ENSACIG00000019890)	spata5l1 (ENSACIG00000019928)	ENSACIG00000019943	dtwd1 (ENSACIG00000019986)	fgf7 (ENSACIG00000020011)	cops2 (ENSACIG00000020020)	SECISBP2L (ENSACIG00000020051)	ENSACIG00000020118	ENSACIG00000020161	ENSACIG00000020179	ENSACIG00000020196	dut (ENSACIG00000020238)
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Fugu	MODERN SPECIES	4	ENSTRUG00000016836	ENSTRUG00000016840	PIAS1 (ENSTRUG00000016843)	skor1a (ENSTRUG00000016849)	map2k5 (ENSTRUG00000016851)	SMAD3 (ENSTRUG00000002512)	smad6a (ENSTRUG00000022333)	ENSTRUG00000029807	tmem208 (ENSTRUG00000016873)	tmem208 (ENSTRUG00000026186)	slc39a1 (ENSTRUG00000016874)	rlbp1a (ENSTRUG00000016880)	abhd2a (ENSTRUG00000016883) #20	smad6a (ENSTRUG00000032173)	mfge8a (ENSTRUG00000016888) #21	HAPLN3 (ENSTRUG00000016895) #22	mibp2 (ENSTRUG00000016897)	bloc1s6 (ENSTRUG00000021749)	slc30a4 (ENSTRUG00000019868)	zgc:153317 (ENSTRUG00000016908)	spata5l1 (ENSTRUG00000016910)	ENSTRUG00000016911	dtwd1 (ENSTRUG00000016918)	fgf7 (ENSTRUG00000021359)	cops2 (ENSTRUG00000016921)	SECISBP2L (ENSTRUG00000016925)	ENSTRUG00000026120	dut (ENSTRUG00000016958)	SLC12A1 (ENSTRUG00000016959)	CTXN2 (ENSTRUG00000016965)	ENSTRUG00000016973
Tetraodon	MODERN SPECIES	20	paqr5a (ENSTNIG00000009556)	kif23 (ENSTNIG00000009555)	TLE3 (ENSTNIG00000009554)	UACA (ENSTNIG00000009552)	ENSTNIG00000009551	ENSTNIG00000009550	PIAS1 (ENSTNIG00000009549)	skor1a (ENSTNIG00000009548)	map2k5 (ENSTNIG00000009547)	SMAD3 (ENSTNIG00000009546)	smad6a (ENSTNIG00000009545)	slc39a1 (ENSTNIG00000009544)	rlbp1a (ENSTNIG00000009543)	abhd2a (ENSTNIG00000009542) #20	mfge8a (ENSTNIG00000009541) #21	HAPLN3 (ENSTNIG00000009540) #22	mibp2 (ENSTNIG00000009539)	bloc1s6 (ENSTNIG00000009538)	slc30a4 (ENSTNIG00000009537)	spata5l1 (ENSTNIG00000009536)	ENSTNIG00000009535	dtwd1 (ENSTNIG00000009534)	FGF7 (ENSTNIG00000009533)	cops2 (ENSTNIG00000009532)	SECISBP2L (ENSTNIG00000009531)	FBN1 (ENSTNIG00000009530)	dut (ENSTNIG00000009529)	SLC12A1 (ENSTNIG00000009528)	CTXN2 (ENSTNIG00000009527)	myef2 (ENSTNIG00000009526)	slc24a5 (ENSTNIG00000009525)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Lumpfish	MODERN SPECIES	18	KIF23 (ENSCLMG00005021061)	TLE3 (ENSCLMG00005020805)	UACA (ENSCLMG00005020794)	ENSCLMG00005020792	ENSCLMG00005020791	PIAS1 (ENSCLMG00005020781)	skor1a (ENSCLMG00005020777)	map2k5 (ENSCLMG00005020775)	SMAD3 (ENSCLMG00005020772)	smad6a (ENSCLMG00005020770)	tmem208 (ENSCLMG00005020768)	slc39a1 (ENSCLMG00005020767)	rlbp1a (ENSCLMG00005020766)	abhd2a (ENSCLMG00005020764) #20	MFGE8 (ENSCLMG00005020383) #21	HAPLN3 (ENSCLMG00005020382) #22	mibp2 (ENSCLMG00005020381)	bloc1s6 (ENSCLMG00005020380)	slc30a4 (ENSCLMG00005020379)	zgc:153317 (ENSCLMG00005020377)	spata5l1 (ENSCLMG00005020375)	ENSCLMG00005020328	dtwd1 (ENSCLMG00005020326)	fgf7 (ENSCLMG00005020325)	cops2 (ENSCLMG00005020324)	SECISBP2L (ENSCLMG00005020323)	ENSCLMG00005020321	ENSCLMG00005020320	FBN1 (ENSCLMG00005020037)	dut (ENSCLMG00005020017)	SLC12A1 (ENSCLMG00005020013)
Stickleback	MODERN SPECIES	1	TLE3 (ENSGACG00000016913)	UACA (ENSGACG00000016909)	ENSGACG00000016897	ENSGACG00000016895	PIAS1 (ENSGACG00000016894)	skor1a (ENSGACG00000016891)	map2k5 (ENSGACG00000016884)	SMAD3 (ENSGACG00000016882)	smad6a (ENSGACG00000016878)	tmem208 (ENSGACG00000016875)	slc39a1 (ENSGACG00000016873)	ENSGACG00000016872	rlbp1a (ENSGACG00000016871)	abhd2a (ENSGACG00000016866) #20	mfge8a (ENSGACG00000016860) #21	HAPLN3 (ENSGACG00000016853) #22	mibp2 (ENSGACG00000016845)	bloc1s6 (ENSGACG00000016843)	slc30a4 (ENSGACG00000016836)	spata5l1 (ENSGACG00000016834)	ENSGACG00000016813	dtwd1 (ENSGACG00000016809)	fgf7 (ENSGACG00000016807)	cops2 (ENSGACG00000016790)	SECISBP2L (ENSGACG00000016786)	ENSGACG00000016784	FBN1 (ENSGACG00000016773)	dut (ENSGACG00000016770)	SLC12A1 (ENSGACG00000016765)	CTXN2 (ENSGACG00000016764)	myef2 (ENSGACG00000016759)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Channel bull blenny	MODERN SPECIES	17	kif23 (ENSCGOG00000003399)	TLE3 (ENSCGOG00000004700)	UACA (ENSCGOG00000010448)	ENSCGOG00000010458	ENSCGOG00000010561	PIAS1 (ENSCGOG00000010586)	skor1a (ENSCGOG00000011015)	map2k5 (ENSCGOG00000011019)	SMAD3 (ENSCGOG00000011028)	smad6a (ENSCGOG00000011407)	tmem208 (ENSCGOG00000011411)	slc39a1 (ENSCGOG00000011417)	rlbp1a (ENSCGOG00000011827)	abhd2a (ENSCGOG00000011430) #20	mfge8a (ENSCGOG00000011837) #21	HAPLN3 (ENSCGOG00000011875) #22	mibp2 (ENSCGOG00000011896)	bloc1s6 (ENSCGOG00000011946)	slc30a4 (ENSCGOG00000011952)	zgc:153317 (ENSCGOG00000012017)	spata5l1 (ENSCGOG00000012018)	ENSCGOG00000012050	dtwd1 (ENSCGOG00000013385)	fgf7 (ENSCGOG00000013386)	cops2 (ENSCGOG00000013394)	SECISBP2L (ENSCGOG00000013639)	ENSCGOG00000013642	FBN1 (ENSCGOG00000013683)	dut (ENSCGOG00000014130)	SLC12A1 (ENSCGOG00000014132)	CTXN2 (ENSCGOG00000014243)
Pike perch	MODERN SPECIES	83		TLE3 (ENSSLUG00000018010)	UACA (ENSSLUG00000018662)	ENSSLUG00000018706	ENSSLUG00000018849	PIAS1 (ENSSLUG00000018888)	skor1a (ENSSLUG00000019082)	map2k5 (ENSSLUG00000019102)	SMAD3 (ENSSLUG00000019159)	smad6a (ENSSLUG00000019173)	tmem208 (ENSSLUG00000019177)	slc39a1 (ENSSLUG00000019185)	rlbp1a (ENSSLUG00000019193)	abhd2a (ENSSLUG00000019221) #20	mfge8a (ENSSLUG00000019421) #21	HAPLN3 (ENSSLUG00000020090) #22	syt9b (ENSSLUG00000020146)	slc16a7 (ENSSLUG00000020153)	ENSSLUG00000020163	NFASC (ENSSLUG00000020174)	ENSSLUG00000020413	ENSSLUG00000021873	ENSSLUG00000022233	pm20d1.2 (ENSSLUG00000022301)	mfsd4ab (ENSSLUG00000022667)	ENSSLUG00000022686	ENSSLUG00000022745	CDC42 (ENSSLUG00000022757)	fbxo44.3 (ENSSLUG00000022770)	dhfr (ENSSLUG00000022772)	dnajc11a (ENSSLUG00000022788)
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
European seabass	MODERN SPECIES	18	KIF23 (ENSDLAG00005014683)	TLE3 (ENSDLAG00005013590)	UACA (ENSDLAG00005013331)	ENSDLAG00005013288	ENSDLAG00005013277	PIAS1 (ENSDLAG00005012766)	skor1a (ENSDLAG00005012682)	map2k5 (ENSDLAG00005012424)	ENSDLAG00005012347	smad6a (ENSDLAG00005012334)	ENSDLAG00005028664	slc39a1 (ENSDLAG00005012303)	ENSDLAG00005032428	abhd2a (ENSDLAG00005012210) #20	MFGE8 (ENSDLAG00005012122) #21	HAPLN3 (ENSDLAG00005012094) #22	mibp2 (ENSDLAG00005012080)	bloc1s6 (ENSDLAG00005029813)	ENSDLAG00005011812	zgc:153317 (ENSDLAG00005012056)	spata5l1 (ENSDLAG00005012044)	dtwd1 (ENSDLAG00005011800)	FGF7 (ENSDLAG00005011794)	COPS2 (ENSDLAG00005011741)	SECISBP2L (ENSDLAG00005011688)	ENSDLAG00005011681	ENSDLAG00005011676	FBN1 (ENSDLAG00005010949)	dut (ENSDLAG00005010901)	SLC12A1 (ENSDLAG00005008560)	CTXN2 (ENSDLAG00005008496)
Large yellow croaker	MODERN SPECIES	480	kif23 (ENSLCRG00005007885)	TLE3 (ENSLCRG00005006727)	UACA (ENSLCRG00005006539)	ENSLCRG00005006538	ENSLCRG00005006537	PIAS1 (ENSLCRG00005006385)	skor1a (ENSLCRG00005006374)	map2k5 (ENSLCRG00005005909)	SMAD3 (ENSLCRG00005005810)	smad6a (ENSLCRG00005005807)	tmem208 (ENSLCRG00005005805)	slc39a1 (ENSLCRG00005005804)	ENSLCRG00005005803	abhd2a (ENSLCRG00005005487) #20	mfge8a (ENSLCRG00005005484) #21	HAPLN3 (ENSLCRG00005005483) #22	mibp2 (ENSLCRG00005005482)	bloc1s6 (ENSLCRG00005005480)	slc30a4 (ENSLCRG00005005479)	zgc:153317 (ENSLCRG00005005477)	spata5l1 (ENSLCRG00005005473)	ENSLCRG00005000460	dtwd1 (ENSLCRG00005000391)	fgf7 (ENSLCRG00005000389)	cops2 (ENSLCRG00005000332)	SECISBP2L (ENSLCRG00005000245)	ENSLCRG00005022695	FBN1 (ENSLCRG00005022093)	dut (ENSLCRG00005022045)	SLC12A1 (ENSLCRG00005021185)	CTXN2 (ENSLCRG00005021145)
Gilthead seabream	MODERN SPECIES	18	ENSSAUG00010001176	ENSSAUG00010001179	PIAS1 (ENSSAUG00010001185)	skor1a (ENSSAUG00010001195)	map2k5 (ENSSAUG00010001213)	ENSSAUG00010001233	ENSSAUG00010001237	SMAD3 (ENSSAUG00010001244)	smad6a (ENSSAUG00010001276)	tmem208 (ENSSAUG00010001282)	slc39a1 (ENSSAUG00010001284)	ENSSAUG00010001286	abhd2a (ENSSAUG00010001289) #20	rlbp1a (ENSSAUG00010001297)	mfge8a (ENSSAUG00010001355) #21	HAPLN3 (ENSSAUG00010001971) #22	mibp2 (ENSSAUG00010001974)	bloc1s6 (ENSSAUG00010001982)	slc30a4 (ENSSAUG00010001988)	zgc:153317 (ENSSAUG00010001990)	spata5l1 (ENSSAUG00010001992)	ENSSAUG00010002030	dtwd1 (ENSSAUG00010002543)	fgf7 (ENSSAUG00010002544)	cops2 (ENSSAUG00010002547)	SECISBP2L (ENSSAUG00010002561)	ENSSAUG00010003255	FBN1 (ENSSAUG00010003510)	SLC12A1 (ENSSAUG00010014810)	CTXN2 (ENSSAUG00010022191)	myef2 (ENSSAUG00010022195)
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Seriola	ANCESTRAL SPECIES	73	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00940000178310	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2930	kif23 (ENSSLDG00000010981)	TLE3 (ENSSLDG00000010840)	UACA (ENSSLDG00000010731)	ENSSLDG00000010683	ENSSLDG00000010659	PIAS1 (ENSSLDG00000010594)	skor1a (ENSSLDG00000010569)	map2k5 (ENSSLDG00000010494)	SMAD3 (ENSSLDG00000010443)	smad6a (ENSSLDG00000010424)	tmem208 (ENSSLDG00000010399)	slc39a1 (ENSSLDG00000010382)	rlbp1a (ENSSLDG00000010365)	abhd2a (ENSSLDG00000010303) #20	mfge8a (ENSSLDG00000010267) #21	HAPLN3 (ENSSLDG00000010248) #22	mibp2 (ENSSLDG00000009812)	bloc1s6 (ENSSLDG00000009498)	slc30a4 (ENSSLDG00000009443)	zgc:153317 (ENSSLDG00000009371)	spata5l1 (ENSSLDG00000009352)	ENSSLDG00000009249	dtwd1 (ENSSLDG00000009340)	fgf7 (ENSSLDG00000009222)	cops2 (ENSSLDG00000009174)	SECISBP2L (ENSSLDG00000009089)	ENSSLDG00000009057	ENSSLDG00000009044	FBN1 (ENSSLDG00000008900)	dut (ENSSLDG00000008851)	ENSSLDG00000008827
Yellowtail amberjack	MODERN SPECIES	95																ENSSLDG00000001879 #22
Greater amberjack	MODERN SPECIES	242	kif23 (ENSSDUG00000017423)	TLE3 (ENSSDUG00000017338)	UACA (ENSSDUG00000017296)	ENSSDUG00000017240	ENSSDUG00000017219	PIAS1 (ENSSDUG00000017186)	skor1a (ENSSDUG00000017148)	map2k5 (ENSSDUG00000017109)	SMAD3 (ENSSDUG00000017091)	smad6a (ENSSDUG00000017082)	tmem208 (ENSSDUG00000017044)	slc39a1 (ENSSDUG00000017030)	ENSSDUG00000017002	abhd2a (ENSSDUG00000016969) #20	mfge8a (ENSSDUG00000016943) #21	HAPLN3 (ENSSDUG00000016925) #22	mibp2 (ENSSDUG00000016586)	bloc1s6 (ENSSDUG00000016550)	slc30a4 (ENSSDUG00000016531)	zgc:153317 (ENSSDUG00000016526)	spata5l1 (ENSSDUG00000016519)	ENSSDUG00000016471	dtwd1 (ENSSDUG00000016453)	fgf7 (ENSSDUG00000016430)	cops2 (ENSSDUG00000016388)	SECISBP2L (ENSSDUG00000016367)	ENSSDUG00000016248	FBN1 (ENSSDUG00000016108)	dut (ENSSDUG00000016077)	SLC12A1 (ENSSDUG00000016031)	CTXN2 (ENSSDUG00000016024)
Barramundi perch	MODERN SPECIES	96	kif23 (ENSLCAG00010000311)	TLE3 (ENSLCAG00010000716)	UACA (ENSLCAG00010001004)	ENSLCAG00010001017	ENSLCAG00010001024	PIAS1 (ENSLCAG00010001027)	skor1a (ENSLCAG00010001038)	map2k5 (ENSLCAG00010001045)	SMAD3 (ENSLCAG00010001077)	smad6a (ENSLCAG00010001144)	tmem208 (ENSLCAG00010001154)	slc39a1 (ENSLCAG00010001163)	ENSLCAG00010001169	abhd2a (ENSLCAG00010001176) #20	mfge8a (ENSLCAG00010001190) #21	HAPLN3 (ENSLCAG00010001202) #22	mibp2 (ENSLCAG00010001214)	bloc1s6 (ENSLCAG00010001233)	slc30a4 (ENSLCAG00010001238)	zgc:153317 (ENSLCAG00010001243)	spata5l1 (ENSLCAG00010001260)	ENSLCAG00010001461	dtwd1 (ENSLCAG00010001874)	fgf7 (ENSLCAG00010001876)	cops2 (ENSLCAG00010001882)	SECISBP2L (ENSLCAG00010001900)	ENSLCAG00010001909	FBN1 (ENSLCAG00010002296)	dut (ENSLCAG00010003411)	SLC12A1 (ENSLCAG00010003607)	CTXN2 (ENSLCAG00010004347)
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00940000155837.p	ENSGT01030000234519.e.b.k.a	ENSGT00940000157475	ENSGT00950000182965.a.b.a.b	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a #20	ENSGT00940000156049.b #21	ENSGT00940000159628.c #22	ENSGT00940000159842.qc	ENSGT00510000047812	ENSGT00940000157545	ENSGT00390000009277	ENSGT00940000160700	ENSGT00390000004624.a.b	ENSGT00940000153766.B	ENSGT00940000159843	ENSGT00530000063301.a.b	ENSGT00490000043356.a	ENSGT00950000182870.b.a	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b
Turbot	MODERN SPECIES	17	KIF23 (ENSSMAG00000021310)	ENSSMAG00000021309	UACA (ENSSMAG00000021308)	ENSSMAG00000021307	ENSSMAG00000021306	PIAS1 (ENSSMAG00000021305)	skor1a (ENSSMAG00000017446)	map2k5 (ENSSMAG00000021303)	ENSSMAG00000021302	smad6a (ENSSMAG00000021301)	ENSSMAG00000021300	slc39a1 (ENSSMAG00000034740)	ENSSMAG00000021298	abhd2a (ENSSMAG00000021297) #20	MFGE8 (ENSSMAG00000021296) #21	HAPLN3 (ENSSMAG00000030247) #22	mibp2 (ENSSMAG00000021294)	bloc1s6 (ENSSMAG00000021293)	slc30a4 (ENSSMAG00000021292)	zgc:153317 (ENSSMAG00000029975)	spata5l1 (ENSSMAG00000021290)	ENSSMAG00000021288	DTWD1 (ENSSMAG00000021289)	FGF7 (ENSSMAG00000021287)	ENSSMAG00000025054	COPS2 (ENSSMAG00000021286)	SECISBP2L (ENSSMAG00000021285)	ENSSMAG00000021284	FBN1 (ENSSMAG00000021283)	dut (ENSSMAG00000021282)	SLC12A1 (ENSSMAG00000021281)
Tongue sole	MODERN SPECIES	15	mapk6 (ENSCSEG00000012488)	leo1 (ENSCSEG00000012502)	tmod2 (ENSCSEG00000012523)	lysmd2 (ENSCSEG00000012539)	scg3 (ENSCSEG00000012546)	vstm2b (ENSCSEG00000012557)	ccnd1 (ENSCSEG00000012564)	map2k5 (ENSCSEG00000012573)	SMAD3 (ENSCSEG00000012585)	SMAD6 (ENSCSEG00000012602)	tmem208 (ENSCSEG00000012613)	slc39a1 (ENSCSEG00000012617)	ENSCSEG00000012628	abhd2a (ENSCSEG00000012650) #20	mfge8a (ENSCSEG00000012660) #21	HAPLN3 (ENSCSEG00000012667) #22	mibp2 (ENSCSEG00000012672)	bloc1s6 (ENSCSEG00000012676)	slc30a4 (ENSCSEG00000012686)	zgc:153317 (ENSCSEG00000012700)	spata5l1 (ENSCSEG00000012712)	ENSCSEG00000012721	dtwd1 (ENSCSEG00000012745)	fgf7 (ENSCSEG00000012750)	cops2 (ENSCSEG00000012761)	SECISBP2L (ENSCSEG00000012789)	ENSCSEG00000012802	ppm1g (ENSCSEG00000012809)	mis12 (ENSCSEG00000012823)	dld (ENSCSEG00000012831)	fam120b (ENSCSEG00000012863)
Clupeocephala	ANCESTRAL SPECIES	311				ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT01020000230648
Otomorpha	ANCESTRAL SPECIES	278			ENSGT00530000063981.b.c	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833
Clupeiformes	ANCESTRAL SPECIES	233	ENSGT00390000004852.a.b.m	ENSGT00530000063981.b.c	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b.c	ENSGT00950000182772.B.a.b.d	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b.a #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a
Denticle herring	MODERN SPECIES	8	ENSDCDG00000027854	MYRF (ENSDCDG00000027867)	tmem258 (ENSDCDG00000027873)	tmem138 (ENSDCDG00000027875)	ube2h (ENSDCDG00000027877)	PRR5L (ENSDCDG00000027878)	api5 (ENSDCDG00000027880)	hsd17b12a (ENSDCDG00000027886)	alkbh3 (ENSDCDG00000027928)	ckmt1 (ENSDCDG00000027932)	pdia3 (ENSDCDG00000027939)	ENSDCDG00000027967 #24	rlbp1b (ENSDCDG00000027974)	abhd2b (ENSDCDG00000027985) #20	mfge8b (ENSDCDG00000028169) #21	hapln3 (ENSDCDG00000028749) #22	ENSDCDG00000028752 #23	ENSDCDG00000028755 #23	PPIP5K1 (ENSDCDG00000028850)	ENSDCDG00000031714	ENSDCDG00000031722	zgc:193812 (ENSDCDG00000031744)	cart2 (ENSDCDG00000031760)	sh3gl3b (ENSDCDG00000031762)	nedd1 (ENSDCDG00000031766)	si:ch211-59o9.10 (ENSDCDG00000031779)	actr6 (ENSDCDG00000031789)	ENSDCDG00000031810	zgc:171459 (ENSDCDG00000031814)	ENSDCDG00000031903	ENSDCDG00000032957
Atlantic herring	MODERN SPECIES	19	ube2h (ENSCHAG00000015945)	ENSCHAG00000015939	ENSCHAG00000015667	api5 (ENSCHAG00000015164)	hsd17b12a (ENSCHAG00000014889)	alkbh3 (ENSCHAG00000014876)	si:ch1073-281m9.1 (ENSCHAG00000014870)	ENSCHAG00000014861 #15	ckmt1 (ENSCHAG00000014407)	CATSPER2 (ENSCHAG00000014313)	pdia3 (ENSCHAG00000014064)	ENSCHAG00000014051 #24	rlbp1b (ENSCHAG00000014002)	abhd2b (ENSCHAG00000013808) #20	mfge8b (ENSCHAG00000013443) #21	hapln3 (ENSCHAG00000013424) #22	ENSCHAG00000013341 #23	PPIP5K1 (ENSCHAG00000012889)	ENSCHAG00000012830	cart2 (ENSCHAG00000012801)	zgc:193812 (ENSCHAG00000012792)	ENSCHAG00000012775	ENSCHAG00000012739	sh3gl3b (ENSCHAG00000012714)	nedd1 (ENSCHAG00000012636)	lyrm5b (ENSCHAG00000012612)	si:ch211-59o9.10 (ENSCHAG00000012601)	sycp3 (ENSCHAG00000012593)	actr6 (ENSCHAG00000012469)	cbll1 (ENSCHAG00000012461)	zgc:101783 (ENSCHAG00000012388)
Otophysi	ANCESTRAL SPECIES	104												ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00390000008346	ENSGT00390000009327	ENSGT00940000159624	ENSGT00940000156334.a.a	ENSGT00390000016453	ENSGT00390000010961.c	ENSGT00390000010961.d	ENSGT00940000156519.p	ENSGT00940000159631	ENSGT00940000155425	ENSGT00950000182772.B.a.b	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a
Channel catfish	MODERN SPECIES	27	ENSIPUG00000003177	ENSIPUG00000003188	ADAM19 (ENSIPUG00000003200)	hic2 (ENSIPUG00000003207)	ENSIPUG00000003210	mlkl (ENSIPUG00000003225)	ENSIPUG00000003236	TMED6 (ENSIPUG00000003251)	NUDT7 (ENSIPUG00000003256)	PDIA3 (ENSIPUG00000003265)	ckmt1 (ENSIPUG00000003307)	ENSIPUG00000003320 #24	RLBP1 (ENSIPUG00000003324)	abhd2b (ENSIPUG00000003365) #20	Edil3 (ENSIPUG00000003390) #21	hapln3 (ENSIPUG00000003421) #22	ENSIPUG00000003438 #23	ENSIPUG00000003478	ENSIPUG00000003573	cartpt (ENSIPUG00000003642)	c8h15orf40 (ENSIPUG00000003652)	ENSIPUG00000003664	sh3gl3 (ENSIPUG00000003694)	nedd1 (ENSIPUG00000003753)	si:ch211-59o9.10 (ENSIPUG00000003802)	sycp3 (ENSIPUG00000003821)	actr6 (ENSIPUG00000003848)	gtse1 (ENSIPUG00000004005)	TMEM60 (ENSIPUG00000004033)	ENSIPUG00000004038	erc1 (ENSIPUG00000004073)
Characiphysae_b	ANCESTRAL SPECIES	7	ENSGT00390000008346	ENSGT00390000009327	ENSGT00940000159624	ENSGT00940000156334.a.a	ENSGT00390000016453	ENSGT00390000010961.c	ENSGT00390000010961.d	ENSGT00940000156519.p	ENSGT00940000159631	ENSGT00940000155425	ENSGT00950000182772.B.a.b	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a
Electric eel	MODERN SPECIES	210														abhd2b (ENSEEEG00000020037) #20	mfge8b (ENSEEEG00000020044) #21	hapln3 (ENSEEEG00000020104) #22	ENSEEEG00000020105 #23	ENSEEEG00000020121 #23	PPIP5K1 (ENSEEEG00000020153)	ENSEEEG00000021525	cart2 (ENSEEEG00000021530)	zgc:193812 (ENSEEEG00000021534)	ENSEEEG00000021536	sh3gl3b (ENSEEEG00000021537)	nedd1 (ENSEEEG00000021542)	si:ch211-59o9.10 (ENSEEEG00000021545)	sycp3 (ENSEEEG00000021546)	actr6 (ENSEEEG00000021556)	gtse1 (ENSEEEG00000021630)	ENSEEEG00000021632	zgc:171459 (ENSEEEG00000021636)
Characoidei	ANCESTRAL SPECIES	2	ENSGT00940000159219.b	ENSGT00390000008346	ENSGT00390000009327	ENSGT00940000159624	ENSGT00940000156334.a.a	ENSGT00390000016453	ENSGT00390000010961.c	ENSGT00390000010961.d	ENSGT00940000156519.p	ENSGT00940000159631	ENSGT00950000182772.B.a.b	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a
Red-bellied piranha	MODERN SPECIES	14	zgc:195212 (ENSPNAG00000022650)	ADAM19 (ENSPNAG00000022567)	hic1l (ENSPNAG00000022553)	ENSPNAG00000022541	ENSPNAG00000022521	TMED6 (ENSPNAG00000022504)	ZDHHC7 (ENSPNAG00000022478)	NUDT7 (ENSPNAG00000022450)	ENSPNAG00000022421	pdia3 (ENSPNAG00000022399)	ckmt1 (ENSPNAG00000022345)	ENSPNAG00000022301 #24	rlbp1b (ENSPNAG00000022288)	abhd2b (ENSPNAG00000022236) #20	mfge8b (ENSPNAG00000003713) #21	hapln3 (ENSPNAG00000022167) #22	ACAN (ENSPNAG00000022144) #23	PPIP5K1 (ENSPNAG00000022113)	ENSPNAG00000022016	cart2 (ENSPNAG00000021749)	zgc:193812 (ENSPNAG00000021711)	ENSPNAG00000021683	sh3gl3b (ENSPNAG00000021567)	nedd1 (ENSPNAG00000021510)	lyrm5b (ENSPNAG00000021436)	si:ch211-59o9.10 (ENSPNAG00000021419)	sycp3 (ENSPNAG00000021372)	actr6 (ENSPNAG00000021050)	gtse1 (ENSPNAG00000021021)	atp2b1b (ENSPNAG00000005335)	zgc:171459 (ENSPNAG00000020891)
Mexicana tetra	MODERN SPECIES	16	ENSAMXG00000043957	ADAM19 (ENSAMXG00000013794)	ENSAMXG00000035854	hic1l (ENSAMXG00000030914)	ENSAMXG00000013769	ENSAMXG00000039970	ENSAMXG00000035386	ENSAMXG00000035222	ZDHHC7 (ENSAMXG00000013736)	pdia3 (ENSAMXG00000013689)	ckmt1 (ENSAMXG00000013684)	ENSAMXG00000041093 #24	rlbp1b (ENSAMXG00000013651)	abhd2b (ENSAMXG00000013636) #20	mfge8b (ENSAMXG00000013623) #21	hapln3 (ENSAMXG00000013617) #22	ENSAMXG00000042874 #23	ENSAMXG00000039144 #23	PPIP5K1 (ENSAMXG00000013519)	ENSAMXG00000029484	cart2 (ENSAMXG00000032334)	zgc:193812 (ENSAMXG00000036518)	ENSAMXG00000009485	sh3gl3b (ENSAMXG00000009473)	nedd1 (ENSAMXG00000009459)	si:ch211-59o9.10 (ENSAMXG00000031339)	lyrm5b (ENSAMXG00000024910)	sycp3 (ENSAMXG00000009449)	actr6 (ENSAMXG00000009440)	ENSAMXG00000009428	atp2b1b (ENSAMXG00000009418)
Cyprinoidei	ANCESTRAL SPECIES	53	ENSGT01090000260003.a.b.b.a.a.a.b.b	ENSGT00940000155413.d	ENSGT00390000018130.a.a.a	ENSGT00950000183103.d.a.a	ENSGT00940000155176.o.a	ENSGT00940000157759	ENSGT00940000154996.a.a.a	ENSGT00940000165314	ENSGT00940000164422	ENSGT00940000160475	ENSGT00530000063745.a	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	152												ENSGT00940000160781.m.a #24	ENSGT00940000164526.b.c	ENSGT00950000182902.b.a.d.b.b.b.a.b #20	ENSGT00940000156049.a.a #21	ENSGT00940000159628.d.a #22	ENSGT00940000155971.d.a.b.g.b #23	ENSGT00390000009048.a.a.h.b	ENSGT00940000158701.b.a	ENSGT00390000018319.a.a.a.b.d.b.a.b	ENSGT00390000010463.b.d	ENSGT00940000157398.i.b.g	ENSGT00940000164439.h	ENSGT00940000158553.b.a.g	ENSGT00390000000062.l	ENSGT00720000108833.a	ENSGT00940000154189.B.a	ENSGT00940000158686.d.b	ENSGT00640000091774.a.c.a.a	ENSGT00640000091774.a.c.b.a	ENSGT00950000183004.a.b.b.a
Goldfish	MODERN SPECIES	45	ribc2 (ENSCARG00000026390)	GALNT8 (ENSCARG00000026396)	ndufa9a (ENSCARG00000026426)	DYRK4 (ENSCARG00000026586)	zgc:154077 (ENSCARG00000026637)	zgc:77158 (ENSCARG00000026699)	ccnd2a (ENSCARG00000026715)	fgf6a (ENSCARG00000026775)	hipk3a (ENSCARG00000026865)	ENSCARG00000029071	ENSCARG00000029083 #24	rlbp1b (ENSCARG00000029097)	abhd2b (ENSCARG00000029125) #20	ENSCARG00000029724	mfge8b (ENSCARG00000029733) #21	hapln3 (ENSCARG00000029871) #22	ENSCARG00000029878 #23	ENSCARG00000030183	cart2 (ENSCARG00000030201)	ENSCARG00000030210	sh3gl3b (ENSCARG00000030236)	nedd1 (ENSCARG00000030248)	ENSCARG00000030262	si:ch211-59o9.10 (ENSCARG00000030267)	sycp3 (ENSCARG00000030275)	actr6 (ENSCARG00000030303)	gtse1 (ENSCARG00000030510)	atp2b1b (ENSCARG00000030541)	zgc:171459 (ENSCARG00000030552)	zgc:113426 (ENSCARG00000030557)	zgc:101783 (ENSCARG00000030568)
Cyprininae_a	ANCESTRAL SPECIES	46	ENSGT00940000165477.b	ENSGT00390000016897.d.b	ENSGT00940000165477.a	ENSGT00390000016897.d.a	ENSGT01100000263502.A.b.b.c	ENSGT00940000158637.c	ENSGT00390000000987.n.a	ENSGT00390000000987.m.d	ENSGT00390000011355.a.a	ENSGT00940000157572.a.b.b	ENSGT00940000155997.lb.b.y	ENSGT00940000160781.m.a #24	ENSGT00940000164526.b.c	ENSGT00950000182902.b.a.d.b.b.b.a.b #20	ENSGT00940000156049.a.a #21	ENSGT00940000159628.d.a #22	ENSGT00940000155971.d.a.b.g.b #23	ENSGT00390000009048.a.a.h.b	ENSGT00940000158701.b.a	ENSGT00390000018319.a.a.a.b.d.b.a.b	ENSGT00390000010463.b.d	ENSGT00940000157398.i.b.g	ENSGT00940000164439.h	ENSGT00390000001810.a	ENSGT00940000158553.b.a.g	ENSGT00390000000062.l	ENSGT00720000108833.a	ENSGT00940000154189.B.a	ENSGT00940000158686.d.b	ENSGT00640000091774.a.c.a.a	ENSGT00640000091774.a.c.b.a
Common carp reference	MODERN SPECIES	33	met (ENSCCRG00000051098)	ENSCCRG00000051046	ENSCCRG00000054988	ENSCCRG00000018294	parietopsin (ENSCCRG00000011274)	ENSCCRG00000008712	ENSCCRG00000008622	tdg.1 (ENSCCRG00000008613)	samm50 (ENSCCRG00000050786)	ENSCCRG00000008585	ENSCCRG00000063749	ENSCCRG00000061886 #24	rlbp1b (ENSCCRG00000011350)	abhd2b (ENSCCRG00000011317) #20	mfge8b (ENSCCRG00000022295) #21	hapln3 (ENSCCRG00000056368) #22	ENSCCRG00000022233 #23	ENSCCRG00000022225	ENSCCRG00000055594	cart2 (ENSCCRG00000015954)	ENSCCRG00000065466	sh3gl3b (ENSCCRG00000015937)	nedd1 (ENSCCRG00000015929)	ENSCCRG00000064001	si:ch211-59o9.10 (ENSCCRG00000015921)	actr6 (ENSCCRG00000015866)	atp2b1b (ENSCCRG00000015848)	zgc:113426 (ENSCCRG00000015835)	mxg (ENSCCRG00000045849)	ENSCCRG00000053451	zgc:101783 (ENSCCRG00000014583)
Golden-line barbel	MODERN SPECIES	30	cav1 (ENSSGRG00000050701)	met (ENSSGRG00000050236)	ENSSGRG00000050227	ENSSGRG00000050226	ENSSGRG00000050224	ENSSGRG00000050222	ENSSGRG00000050220	ENSSGRG00000050219	tdg.1 (ENSSGRG00000050218)	ENSSGRG00000050217	ENSSGRG00000050216	ENSSGRG00000050213	ENSSGRG00000050212 #24	rlbp1b (ENSSGRG00000050207)	mfge8b (ENSSGRG00000050185) #21	hapln3 (ENSSGRG00000050183) #22	ENSSGRG00000050175 #23	ENSSGRG00000050171 #23	ENSSGRG00000050168 #23	PPIP5K1 (ENSSGRG00000050149)	ENSSGRG00000050144	cart2 (ENSSGRG00000050131)	ENSSGRG00000050126	nedd1 (ENSSGRG00000050122)	nedd1 (ENSSGRG00000050120)	lyrm5b (ENSSGRG00000050119)	si:ch211-59o9.10 (ENSSGRG00000050118)	sycp3 (ENSSGRG00000050117)	actr6 (ENSSGRG00000050041)	gtse1 (ENSSGRG00000050039)	atp2b1b (ENSSGRG00000050038)
Cyprininae	ANCESTRAL SPECIES	197	ENSGT01100000263502.A.b.b.d	ENSGT00940000158637.d	ENSGT00390000007685	ENSGT00390000000987.n.b	ENSGT00390000000987.m.c	ENSGT00940000155662.e.b	ENSGT00940000180066	ENSGT00940000176351	ENSGT00390000011355.a.b	ENSGT00940000155997.lb.b.z	ENSGT00940000157572.a.b.a	ENSGT00940000160781.m.b #24	ENSGT00940000164526.b.d	ENSGT00950000182902.b.a.d.b.b.b.a.a #20	ENSGT00940000156049.a.b #21	ENSGT00940000159628.d.b #22	ENSGT00940000155971.d.a.b.h #23	ENSGT00390000009048.a.a.h.a	ENSGT00940000158701.b.b	ENSGT00390000018319.a.a.a.b.d.b.a.a	ENSGT00940000164795	ENSGT00390000010463.b.c	ENSGT00940000157398.i.b.h	ENSGT00940000164439.g	ENSGT00390000001810.a	ENSGT00940000158553.b.a.h	ENSGT00390000000062.k	ENSGT00720000108833.b	ENSGT00940000154189.B.b	ENSGT00940000158686.d.a	ENSGT00640000091774.a.c.a.b
Goldfish	MODERN SPECIES	17	ENSCARG00000011732	tdg.1 (ENSCARG00000011739)	ENSCARG00000011752	NT5DC3 (ENSCARG00000011785)	ENSCARG00000012234	ENSCARG00000012236	ENSCARG00000012243	ENSCARG00000012267	ENSCARG00000012271	samm50 (ENSCARG00000012282)	LRTM2 (ENSCARG00000012313)	ENSCARG00000012315 #24	rlbp1b (ENSCARG00000012325)	abhd2b (ENSCARG00000012354) #20	mfge8b (ENSCARG00000012521) #21	hapln3 (ENSCARG00000012530) #22	ENSCARG00000012547 #23	PPIP5K1 (ENSCARG00000012567)	ENSCARG00000012593	cart2 (ENSCARG00000012600)	zgc:193812 (ENSCARG00000012610)	ENSCARG00000012620	sh3gl3b (ENSCARG00000012639)	nedd1 (ENSCARG00000012647)	lyrm5b (ENSCARG00000012649)	si:ch211-59o9.10 (ENSCARG00000012657)	sycp3 (ENSCARG00000012665)	actr6 (ENSCARG00000012688)	gtse1 (ENSCARG00000012672)	atp2b1b (ENSCARG00000012709)	zgc:171459 (ENSCARG00000012728)
Cyprininae_a	ANCESTRAL SPECIES	16	ENSGT01100000263502.A.b.b.d	ENSGT00940000158637.d	ENSGT00390000007685	ENSGT00390000000987.n.b	ENSGT00390000000987.m.c	ENSGT00940000155662.e.b	ENSGT00940000180066	ENSGT00940000176351	ENSGT00390000011355.a.b	ENSGT00940000155997.lb.b.z	ENSGT00940000157572.a.b.a	ENSGT00940000160781.m.b #24	ENSGT00940000164526.b.d	ENSGT00950000182902.b.a.d.b.b.b.a.a #20	ENSGT00940000156049.a.b #21	ENSGT00940000159628.d.b #22	ENSGT00940000155971.d.a.b.h #23	ENSGT00390000009048.a.a.h.a	ENSGT00940000158701.b.b	ENSGT00390000018319.a.a.a.b.d.b.a.a	ENSGT00940000164795	ENSGT00390000010463.b.c	ENSGT00940000157398.i.b.h	ENSGT00940000164439.g	ENSGT00940000158553.b.a.h	ENSGT00390000000062.k	ENSGT00720000108833.b	ENSGT00940000154189.B.b	ENSGT00940000158686.d.a	ENSGT00640000091774.a.c.a.b	ENSGT00640000091774.a.c.b.b
Common carp reference	MODERN SPECIES	37	ENSCCRG00000050810	parietopsin (ENSCCRG00000050805)	NT5DC3 (ENSCCRG00000050803)	uqcc6 (ENSCCRG00000050802)	TDG (ENSCCRG00000050800)	tdg.1 (ENSCCRG00000050797)	ENSCCRG00000050795	ENSCCRG00000050792	samm50 (ENSCCRG00000008590)	ENSCCRG00000030965	ENSCCRG00000011805	ENSCCRG00000030963 #24	rlbp1b (ENSCCRG00000030962)	abhd2b (ENSCCRG00000030947) #20	mfge8b (ENSCCRG00000052410) #21	hapln3 (ENSCCRG00000018476) #22	ENSCCRG00000018477 #23	ENSCCRG00000018832	ENSCCRG00000068721	cart2 (ENSCCRG00000015387)	zgc:193812 (ENSCCRG00000015391)	ENSCCRG00000080450	sh3gl3b (ENSCCRG00000024481)	nedd1 (ENSCCRG00000042919)	si:ch211-59o9.10 (ENSCCRG00000043018)	actr6 (ENSCCRG00000043023)	gtse1 (ENSCCRG00000015854)	atp2b1b (ENSCCRG00000079688)	zgc:171459 (ENSCCRG00000043053)	zgc:113426 (ENSCCRG00000024550)	ENSCCRG00000024557
Golden-line barbel	MODERN SPECIES	132	ENSSGRG00000028747	ENSSGRG00000028746	parietopsin (ENSSGRG00000028745)	NT5DC3 (ENSSGRG00000028504)	ENSSGRG00000028497	tdg.1 (ENSSGRG00000028495)	ENSSGRG00000028491	samm50 (ENSSGRG00000028405)	ENSSGRG00000028403	ENSSGRG00000028402	ENSSGRG00000028390	ENSSGRG00000028382 #24	rlbp1b (ENSSGRG00000028378)	abhd2b (ENSSGRG00000028277) #20	mfge8b (ENSSGRG00000027967) #21	hapln3 (ENSSGRG00000027965) #22	ENSSGRG00000027957 #23	ENSSGRG00000027954 #23	ENSSGRG00000027946	cart2 (ENSSGRG00000027934)	zgc:193812 (ENSSGRG00000027932)	ENSSGRG00000027929	sh3gl3b (ENSSGRG00000027889)	nedd1 (ENSSGRG00000027888)	sycp3 (ENSSGRG00000027885)	actr6 (ENSSGRG00000027674)	atp2b1b (ENSSGRG00000027010)	zgc:171459 (ENSSGRG00000026995)	zgc:113426 (ENSSGRG00000026994)	ENSSGRG00000026889	ENSSGRG00000026887
Zebrafish	MODERN SPECIES	17	ENSDARG00000015732	ENSDARG00000101725	parietopsin (ENSDARG00000052056)	NT5DC3 (ENSDARG00000062949)	uqcc6 (ENSDARG00000045797)	TDG (ENSDARG00000086450)	tdg.1 (ENSDARG00000013004)	samm50 (ENSDARG00000045814)	ENSDARG00000023886	ENSDARG00000045811	ENSDARG00000079783 #24	rlbp1b (ENSDARG00000045808)	abhd2b (ENSDARG00000045804) #20	mfge8b (ENSDARG00000045803) #21	ENSDARG00000112947	hapln3 (ENSDARG00000045802) #22	ENSDARG00000045799 #23	ENSDARG00000073909	ENSDARG00000022045	cart2 (ENSDARG00000045832)	ENSDARG00000062781	zgc:193812 (ENSDARG00000097310)	sh3gl3b (ENSDARG00000007302)	nedd1 (ENSDARG00000013472)	lyrm5b (ENSDARG00000045827)	si:ch211-59o9.10 (ENSDARG00000089967)	sycp3 (ENSDARG00000013438)	actr6 (ENSDARG00000021370)	gtse1 (ENSDARG00000013719)	atp2b1b (ENSDARG00000007788)	zgc:171459 (ENSDARG00000077248)
Euteleosteomorpha	ANCESTRAL SPECIES	96	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000159572.a.b	ENSGT00390000008748.b.g.a	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT01030000234534.B.a.b.a.a
Acanthomorphata	ANCESTRAL SPECIES	4	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000176053	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000176053	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000176053	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Tiger tail seahorse	MODERN SPECIES	223	sin3aa (ENSHCOG00000007332)	crabp1a (ENSHCOG00000007356)	skic8 (ENSHCOG00000007364)	slc25a44a (ENSHCOG00000007375)	IREB2 (ENSHCOG00000007424)	snx1a (ENSHCOG00000007437)	ENSHCOG00000007443 ##35	AP3B2 (ENSHCOG00000008076)	dnai4 (ENSHCOG00000008199)	ENSHCOG00000008212	adpgk (ENSHCOG00000008246)	ENSHCOG00000008259 #24	rlbp1b (ENSHCOG00000008283)	ABHD2 (ENSHCOG00000008328) #20	mfge8b (ENSHCOG00000008333) #21	hapln3 (ENSHCOG00000000273) #22	ENSHCOG00000008375 #23	PPIP5K1 (ENSHCOG00000008460)	ENSHCOG00000008508	scamp2 (ENSHCOG00000008543)	mpi (ENSHCOG00000008568)	plex9.2 (ENSHCOG00000008574)	myo9ab (ENSHCOG00000008638)	ENSHCOG00000008657	OAZ2 (ENSHCOG00000008670)	ppib (ENSHCOG00000008676)	pdia3 (ENSHCOG00000008703)	ckmt1 (ENSHCOG00000008712)	ENSHCOG00000008748 #15	si:ch1073-281m9.1 (ENSHCOG00000008757)	rgma (ENSHCOG00000008770)
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000176053	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Aplocheiloidei	ANCESTRAL SPECIES	86	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075
Mangrove rivulus	MODERN SPECIES	185	samm50 (ENSKMAG00000006326)	api5 (ENSKMAG00000006383)	ENSKMAG00000006443	hsd17b12a (ENSKMAG00000006474)	alkbh3 (ENSKMAG00000006499)	si:ch1073-281m9.1 (ENSKMAG00000006520)	ENSKMAG00000006530	ENSKMAG00000006553 #15	CKMT1B (ENSKMAG00000006608)	pdia3 (ENSKMAG00000006635)	ENSKMAG00000006695 #24	rlbp1b (ENSKMAG00000006708)	ABHD2 (ENSKMAG00000006740) #20	ENSKMAG00000006773	mfge8b (ENSKMAG00000006805) #21	hapln3 (ENSKMAG00000006826) #22	ENSKMAG00000006835 #23	PPIP5K1 (ENSKMAG00000006865)	ENSKMAG00000006916	scamp2 (ENSKMAG00000006931)	mpi (ENSKMAG00000006983)
Turquoise killifish	MODERN SPECIES	1622	tdg.1 (ENSNFUG00015011875)	ENSNFUG00015011888	ENSNFUG00015011903	ENSNFUG00015011914	SAMM50 (ENSNFUG00015011940)	api5 (ENSNFUG00015012092)	ENSNFUG00015012471	hsd17b12a (ENSNFUG00015012494)	TICRR (ENSNFUG00015012565) #15	CKMT1A (ENSNFUG00015012611)	PDIA3 (ENSNFUG00015013479)	ENSNFUG00015013499 #24	rlbp1b (ENSNFUG00015013527)	ABHD2 (ENSNFUG00015013560) #20	mfge8b (ENSNFUG00015013620) #21	hapln3 (ENSNFUG00015013932) #22	ENSNFUG00015013958 #23	ENSNFUG00015013964	ENSNFUG00015013968	ENSNFUG00015013972	IMMP2L (ENSNFUG00015013973)	znf277 (ENSNFUG00015013985)	SPG11 (ENSNFUG00015014005)	FAM96A (ENSNFUG00015014088)	PDCD2L (ENSNFUG00015014102)	ENSNFUG00015014116	ENSNFUG00015014167	DUS2L (ENSNFUG00015014263)	CDKN1C (ENSNFUG00015014777)	PTDSS2 (ENSNFUG00015014799)	ENSNFUG00015014994
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817	ENSGT00950000182940.a ##35
NAME_4	ANCESTRAL SPECIES	65	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817	ENSGT00950000182940.a ##35	ENSGT00940000155889.d
Mummichog	MODERN SPECIES	2196	ENSFHEG00000018954	uqcc6 (ENSFHEG00000018903)	ENSFHEG00000018898	samm50 (ENSFHEG00000018891)	api5 (ENSFHEG00000018834)	hsd17b12a (ENSFHEG00000018795)	alkbh3 (ENSFHEG00000018735)	si:ch1073-281m9.1 (ENSFHEG00000018722)	ENSFHEG00000018715 #15	CKMT1A (ENSFHEG00000018705)	pdia3 (ENSFHEG00000018700)	ENSFHEG00000018658 #24	rlbp1b (ENSFHEG00000018621)	ABHD2 (ENSFHEG00000018595) #20	mfge8b (ENSFHEG00000018539) #21	hapln3 (ENSFHEG00000018530) #22	ENSFHEG00000018489 #23	PPIP5K1 (ENSFHEG00000018336)	ENSFHEG00000018247	ENSFHEG00000018240	scamp2 (ENSFHEG00000018228)	mpi (ENSFHEG00000018214)	plex9.2 (ENSFHEG00000018188)	ENSFHEG00000018181	myo9ab (ENSFHEG00000018161)	OAZ2 (ENSFHEG00000018107)	ppib (ENSFHEG00000018102)	adpgk (ENSFHEG00000018095)	snx22 (ENSFHEG00000018072)	ENSFHEG00000018059	ENSFHEG00000018030
Sheepshead minnow	MODERN SPECIES	482	ftsj1 (ENSCVAG00000009618)	ENSCVAG00000000702	tdg.1 (ENSCVAG00000009574)	samm50 (ENSCVAG00000009564)	api5 (ENSCVAG00000009525)	hsd17b12a (ENSCVAG00000009483)	alkbh3 (ENSCVAG00000009432)	si:ch1073-281m9.1 (ENSCVAG00000009421)	ENSCVAG00000009414 #15	CKMT1B (ENSCVAG00000009359)	pdia3 (ENSCVAG00000009351)	ENSCVAG00000009300 #24	rlbp1b (ENSCVAG00000009243)	ABHD2 (ENSCVAG00000009219) #20	mfge8b (ENSCVAG00000009176) #21	hapln3 (ENSCVAG00000009162) #22
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Poecilia	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
NAME_6	ANCESTRAL SPECIES	216						ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e.f	ENSGT00390000012715.e.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a
Sailfin molly	MODERN SPECIES	1250									ENSPLAG00000006035 #15	ckmt1 (ENSPLAG00000006016)	pdia3 (ENSPLAG00000005981)	ENSPLAG00000005932 #24	rlbp1b (ENSPLAG00000005844)	ABHD2 (ENSPLAG00000005829) #20	mfge8b (ENSPLAG00000005776) #21	hapln3 (ENSPLAG00000000115) #22	ENSPLAG00000005758 #23
Amazon molly	MODERN SPECIES	580							hsd17b12a (ENSPFOG00000002602)	alkbh3 (ENSPFOG00000002705)	ENSPFOG00000002785 #15	CKMT1A (ENSPFOG00000002901)	pdia3 (ENSPFOG00000003052)	ENSPFOG00000003318 #24	rlbp1b (ENSPFOG00000003347)	ABHD2 (ENSPFOG00000003442) #20	mfge8b (ENSPFOG00000003628) #21	hapln3 (ENSPFOG00000003850) #22	ENSPFOG00000003926 #23	PPIP5K1 (ENSPFOG00000004141)	ENSPFOG00000005194	ENSPFOG00000022374	scamp2 (ENSPFOG00000005300)	mpi (ENSPFOG00000005394)	plex9.2 (ENSPFOG00000005517)	ENSPFOG00000005521	ENSPFOG00000021742	myo9ab (ENSPFOG00000005553)	OAZ2 (ENSPFOG00000006244)	ppib (ENSPFOG00000006347)	adpgk (ENSPFOG00000006413)	snx22 (ENSPFOG00000006522)
Guppy	MODERN SPECIES	458	ENSPREG00000005381	ENSPREG00000005391	samm50 (ENSPREG00000005410)	api5 (ENSPREG00000005447)	hsd17b12a (ENSPREG00000005493)	alkbh3 (ENSPREG00000005505)	si:ch1073-281m9.1 (ENSPREG00000005528)	ENSPREG00000005552 #15	ckmt1 (ENSPREG00000005643)	ENSPREG00000005681	pdia3 (ENSPREG00000005720)	ENSPREG00000005954 #24	rlbp1b (ENSPREG00000005970)	ABHD2 (ENSPREG00000005995) #20	mfge8b (ENSPREG00000006042) #21	hapln3 (ENSPREG00000006070) #22	ENSPREG00000006091 #23	PPIP5K1 (ENSPREG00000006124)	ENSPREG00000006172	ENSPREG00000006195	ENSPREG00000006245	ENSPREG00000006265	ENSPREG00000006282	ENSPREG00000006297	ENSPREG00000006309	NTRK3 (ENSPREG00000006328) #28	pard6a (ENSPREG00000006370)	gal (ENSPREG00000006400)	cfdp1 (ENSPREG00000006417)	bcar1 (ENSPREG00000006436)	lrp5 (ENSPREG00000006550)
Platyfish	MODERN SPECIES	11	ENSXMAG00000012449	samm50 (ENSXMAG00000012450)	api5 (ENSXMAG00000012462)	hsd17b12a (ENSXMAG00000001590)	alkbh3 (ENSXMAG00000013123)	ENSXMAG00000028574	ENSXMAG00000029513	si:ch1073-281m9.1 (ENSXMAG00000028133)	ENSXMAG00000013108 #15	CKMT1A (ENSXMAG00000013099)	pdia3 (ENSXMAG00000013069)	ENSXMAG00000013066 #24	rlbp1b (ENSXMAG00000002347)	ABHD2 (ENSXMAG00000013057) #20	mfge8b (ENSXMAG00000013036) #21	hapln3 (ENSXMAG00000030033) #22	ENSXMAG00000012577 #23	PPIP5K1 (ENSXMAG00000012976)	ENSXMAG00000023853	scamp2 (ENSXMAG00000012952)	mpi (ENSXMAG00000012946)	plex9.2 (ENSXMAG00000012944)	SOX6 (ENSXMAG00000012894)	ENSXMAG00000012892	INSC (ENSXMAG00000012891)	calca (ENSXMAG00000028956)	psma1 (ENSXMAG00000025977)	ENSXMAG00000029930	LMO1 (ENSXMAG00000012829)	ENSXMAG00000012811	ENSXMAG00000026181
Oryzias	ANCESTRAL SPECIES	16	ENSGT00390000000987.m	ENSGT00390000000987.n	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00950000182857.a.b	ENSGT00390000018100
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00390000000987.m	ENSGT00390000000987.n	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00950000182857.a.b.r	ENSGT00940000156209.v.b	ENSGT00950000182857.a.b.q
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	490	ENSOSIG00000008551	ENSOSIG00000008549	tdg.1 (ENSOSIG00000008548)	TDG (ENSOSIG00000008547)	ENSOSIG00000008545	samm50 (ENSOSIG00000008038)	hsd17b12a (ENSOSIG00000008016)	alkbh3 (ENSOSIG00000008007)	ENSOSIG00000007199 #15	CKMT1A (ENSOSIG00000006481)	pdia3 (ENSOSIG00000006413)	ENSOSIG00000006407 #24	rlbp1b (ENSOSIG00000006403)	ABHD2 (ENSOSIG00000006107) #20	mfge8b (ENSOSIG00000006069) #21	hapln3 (ENSOSIG00000006060) #22	ENSOSIG00000006039 #23	ENSOSIG00000006033	ENSOSIG00000006031
Chinese medaka	MODERN SPECIES	4864																hapln3 (ENSOSIG00000004506) #22
Japanese Medaka HdrR	MODERN SPECIES	20	ENSORLG00000001329	ENSORLG00000030202	uqcc6 (ENSORLG00000027408)	samm50 (ENSORLG00000001373)	api5 (ENSORLG00000001385)	hsd17b12a (ENSORLG00000001421)	alkbh3 (ENSORLG00000001437)	si:ch1073-281m9.1 (ENSORLG00000023672)	ENSORLG00000001442 #15	ENSORLG00000001451	pdia3 (ENSORLG00000001475)	ENSORLG00000029585 #24	rlbp1b (ENSORLG00000001487)	ABHD2 (ENSORLG00000001498) #20	mfge8b (ENSORLG00000001529) #21	hapln3 (ENSORLG00000001540) #22	ENSORLG00000001551 #23	ENSORLG00000001575	ENSORLG00000024836	ENSORLG00000029905	scamp2 (ENSORLG00000026524)	mpi (ENSORLG00000001616)	plex9.2 (ENSORLG00000023958)	ENSORLG00000030645	ENSORLG00000001682	ENSORLG00000026017	OAZ2 (ENSORLG00000001693)	ppib (ENSORLG00000001706)	adpgk (ENSORLG00000001716)	snx22 (ENSORLG00000001725)	ENSORLG00000028839
Oryzias_b	ANCESTRAL SPECIES	58	ENSGT00390000000987.m	ENSGT00390000000987.n	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b
Indian medaka	MODERN SPECIES	15	tdg.1 (ENSOMEG00000003666)	ENSOMEG00000003695	ENSOMEG00000003710	samm50 (ENSOMEG00000003726)	api5 (ENSOMEG00000003769)	hsd17b12a (ENSOMEG00000003809)	alkbh3 (ENSOMEG00000003835)	si:ch1073-281m9.1 (ENSOMEG00000003845)	ENSOMEG00000003878 #15	CKMT1A (ENSOMEG00000003918)	pdia3 (ENSOMEG00000003948)	ENSOMEG00000003990 #24	rlbp1b (ENSOMEG00000004015)	ABHD2 (ENSOMEG00000004073) #20	mfge8b (ENSOMEG00000004132) #21	hapln3 (ENSOMEG00000004149) #22	ENSOMEG00000004165 #23	PPIP5K1 (ENSOMEG00000004199)	ENSOMEG00000004212	ENSOMEG00000004221	ENSOMEG00000004229	ENSOMEG00000000099	cat (ENSOMEG00000004280)	syt12 (ENSOMEG00000004321)	PEAK1 (ENSOMEG00000004348)	hmg20a (ENSOMEG00000004390)	ENSOMEG00000004401	LINGO1 (ENSOMEG00000004408)	ENSOMEG00000004422	ENSOMEG00000004534	ENSOMEG00000004553
Javanese ricefish	MODERN SPECIES	20	tdg.1 (ENSOJAG00000001007)	ENSOJAG00000000970	ENSOJAG00000000953	samm50 (ENSOJAG00000000908)	api5 (ENSOJAG00000000840)	hsd17b12a (ENSOJAG00000000808)	alkbh3 (ENSOJAG00000000802)	si:ch1073-281m9.1 (ENSOJAG00000000799)	ENSOJAG00000000790 #15	CKMT1A (ENSOJAG00000000661)	pdia3 (ENSOJAG00000000547)	ENSOJAG00000000491 #24	rlbp1b (ENSOJAG00000000480)	ABHD2 (ENSOJAG00000000466) #20	mfge8b (ENSOJAG00000000430) #21	hapln3 (ENSOJAG00000000398) #22	ENSOJAG00000000368 #23	ENSOJAG00000000152	ENSOJAG00000000113	ENSOJAG00000000105	ENSOJAG00000019339	ENSOJAG00000019317	met (ENSOJAG00000019095)	cav1 (ENSOJAG00000019030)	cav2 (ENSOJAG00000019015)	tes (ENSOJAG00000018932)	ENSOJAG00000018915	CPA1 (ENSOJAG00000018616)	CPA1 (ENSOJAG00000018426)	cep41 (ENSOJAG00000018368)	poc1b (ENSOJAG00000018342)
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817	ENSGT00950000182940.a ##35
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817	ENSGT00950000182940.a ##35
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817	ENSGT00950000182940.a ##35	ENSGT00940000155889.d
Haplochromini	ANCESTRAL SPECIES		ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156026.f	ENSGT00940000156817	ENSGT00950000182940.a ##35
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156026.f	ENSGT00940000156817	ENSGT00950000182940.a ##35
P. nyererei	MODERN SPECIES	338	ENSPNYG00000010553	uqcc6 (ENSPNYG00000010538)	ENSPNYG00000010525	samm50 (ENSPNYG00000010481)	api5 (ENSPNYG00000010426)	hsd17b12a (ENSPNYG00000010372)	alkbh3 (ENSPNYG00000010362)	si:ch1073-281m9.1 (ENSPNYG00000010327)	ENSPNYG00000010291 #15	CKMT1A (ENSPNYG00000010267)	pdia3 (ENSPNYG00000010218)	ENSPNYG00000010204 #24	rlbp1b (ENSPNYG00000010043)	ABHD2 (ENSPNYG00000009992) #20	mfge8b (ENSPNYG00000009978) #21	hapln3 (ENSPNYG00000009966) #22	ENSPNYG00000009921 #23	ENSPNYG00000009909	PPIP5K1 (ENSPNYG00000009853)	ENSPNYG00000009734	scamp2 (ENSPNYG00000009698)	mpi (ENSPNYG00000009672)	myo9ab (ENSPNYG00000009446)	OAZ2 (ENSPNYG00000009381)	ppib (ENSPNYG00000009306)	adpgk (ENSPNYG00000009283)	snx22 (ENSPNYG00000009265)	LRRC18 (ENSPNYG00000009246)	AP3B2 (ENSPNYG00000009200)	ENSPNYG00000009150 ##35	snx1a (ENSPNYG00000009088)
Haplochromini_B	ANCESTRAL SPECIES	20	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156026.f	ENSGT00940000156817	ENSGT00950000182940.a ##35
Zebra mbuna	MODERN SPECIES	1110	uqcc6 (ENSMZEG00005011915)	ENSMZEG00005011903	samm50 (ENSMZEG00005011853)	api5 (ENSMZEG00005011817)	hsd17b12a (ENSMZEG00005011795)	alkbh3 (ENSMZEG00005011786)	si:ch1073-281m9.1 (ENSMZEG00005011779)	ENSMZEG00005011749 #15	CKMT1A (ENSMZEG00005011732)	pdia3 (ENSMZEG00005011699)	ENSMZEG00005011688 #24	ENSMZEG00005011683	rlbp1b (ENSMZEG00005011671)	ABHD2 (ENSMZEG00005011640) #20	mfge8b (ENSMZEG00005011554) #21	hapln3 (ENSMZEG00005011511) #22	ENSMZEG00005011488 #23	ENSMZEG00005011474	PPIP5K1 (ENSMZEG00005011301)	ENSMZEG00005011246	scamp2 (ENSMZEG00005011191)	mpi (ENSMZEG00005011185)	myo9ab (ENSMZEG00005011148)	OAZ2 (ENSMZEG00005011098)	ppib (ENSMZEG00005011082)	adpgk (ENSMZEG00005011065)	snx22 (ENSMZEG00005011054)	LRRC18 (ENSMZEG00005011049)	AP3B2 (ENSMZEG00005011020)	ENSMZEG00005011003 ##35	snx1a (ENSMZEG00005010979)
Eastern happy	MODERN SPECIES	19	ENSACLG00000023121	samm50 (ENSACLG00000023149)	api5 (ENSACLG00000023182)	ENSACLG00000023206	hsd17b12a (ENSACLG00000023208)	alkbh3 (ENSACLG00000023226)	si:ch1073-281m9.1 (ENSACLG00000023257)	ENSACLG00000023264 #15	CKMT1A (ENSACLG00000023294)	pdia3 (ENSACLG00000023381)	ENSACLG00000023402 #24	rlbp1b (ENSACLG00000023408)	ENSACLG00000023425	ABHD2 (ENSACLG00000023427) #20	mfge8b (ENSACLG00000023446) #21	hapln3 (ENSACLG00000023480) #22	ENSACLG00000023486 #23	PPIP5K1 (ENSACLG00000023567)	ENSACLG00000023875	ENSACLG00000023885	ENSACLG00000023908	scamp2 (ENSACLG00000023915)	mpi (ENSACLG00000023928)	ENSACLG00000023991	myo9ab (ENSACLG00000024008)	ENSACLG00000024089	ENSACLG00000024091	OAZ2 (ENSACLG00000024099)	ppib (ENSACLG00000024356)	adpgk (ENSACLG00000024385)	ENSACLG00000024412
Burton s mouthbrooder	MODERN SPECIES	403	ENSHBUG00000008755	uqcc6 (ENSHBUG00000008745)	ENSHBUG00000008733	samm50 (ENSHBUG00000008720)	api5 (ENSHBUG00000008673)	hsd17b12a (ENSHBUG00000008619)	alkbh3 (ENSHBUG00000008513)	si:ch1073-281m9.1 (ENSHBUG00000001088)	ENSHBUG00000008487 #15	CKMT1A (ENSHBUG00000000802)	pdia3 (ENSHBUG00000008434)	ENSHBUG00000008380 #24	rlbp1b (ENSHBUG00000008363)	ABHD2 (ENSHBUG00000008349) #20	mfge8b (ENSHBUG00000008283) #21	hapln3 (ENSHBUG00000008267) #22	ENSHBUG00000008251 #23	PPIP5K1 (ENSHBUG00000008112)	ENSHBUG00000007737	ENSHBUG00000007712	scamp2 (ENSHBUG00000007616)	mpi (ENSHBUG00000007587)	ENSHBUG00000007541	myo9ab (ENSHBUG00000007522)	OAZ2 (ENSHBUG00000007425)	ppib (ENSHBUG00000000186)	adpgk (ENSHBUG00000007378)	snx22 (ENSHBUG00000007351)	LRRC18 (ENSHBUG00000007334)	AP3B2 (ENSHBUG00000007295)	ENSHBUG00000007257 ##35
Lyretail cichlid	MODERN SPECIES	293	uqcc6 (ENSNBRG00000015995)	ENSNBRG00000016000	samm50 (ENSNBRG00000016019)	api5 (ENSNBRG00000016047)	hsd17b12a (ENSNBRG00000016106)	alkbh3 (ENSNBRG00000016311)	si:ch1073-281m9.1 (ENSNBRG00000016332)	ENSNBRG00000016339 #15	ENSNBRG00000016386	ENSNBRG00000016392	pdia3 (ENSNBRG00000016425)	ENSNBRG00000016499 #24	rlbp1b (ENSNBRG00000016510)	ABHD2 (ENSNBRG00000016542) #20	mfge8b (ENSNBRG00000016591) #21	hapln3 (ENSNBRG00000016718) #22	ENSNBRG00000016740 #23	ENSNBRG00000016772 #23	PPIP5K1 (ENSNBRG00000016908)	ENSNBRG00000017064	ENSNBRG00000017099	scamp2 (ENSNBRG00000017179)	mpi (ENSNBRG00000017191)	myo9ab (ENSNBRG00000017220)	OAZ2 (ENSNBRG00000017294)	ppib (ENSNBRG00000017314)	adpgk (ENSNBRG00000017328)	ENSNBRG00000017342	AP3B2 (ENSNBRG00000017387)	ENSNBRG00000017598 ##35	snx1a (ENSNBRG00000017616)
Nile tilapia	MODERN SPECIES	19	ENSONIG00000015586	ENSONIG00000015588	ENSONIG00000015589	samm50 (ENSONIG00000015591)	api5 (ENSONIG00000015593)	hsd17b12a (ENSONIG00000015599)	alkbh3 (ENSONIG00000015605)	si:ch1073-281m9.1 (ENSONIG00000036412)	ENSONIG00000015608 #15	CKMT1A (ENSONIG00000015611)	pdia3 (ENSONIG00000015614)	ENSONIG00000015622 #24	rlbp1b (ENSONIG00000015624)	ABHD2 (ENSONIG00000015627) #20	mfge8b (ENSONIG00000015629) #21	hapln3 (ENSONIG00000015632) #22	ENSONIG00000015637 #23	PPIP5K1 (ENSONIG00000015640)	ENSONIG00000027891	ENSONIG00000015643	SCAMP2 (ENSONIG00000015646)	mpi (ENSONIG00000027835)	myo9ab (ENSONIG00000012795)	OAZ2 (ENSONIG00000012811)	ppib (ENSONIG00000012814)	adpgk (ENSONIG00000032289)	snx22 (ENSONIG00000040696)	AP3B2 (ENSONIG00000012821)	ENSONIG00000012830 ##35	snx1a (ENSONIG00000012833)	IREB2 (ENSONIG00000012838)
Midas cichlid	MODERN SPECIES	1326	uqcc6 (ENSACIG00000011797)	ENSACIG00000011805	samm50 (ENSACIG00000011817)	api5 (ENSACIG00000011852)	hsd17b12a (ENSACIG00000011872)	alkbh3 (ENSACIG00000011887)	si:ch1073-281m9.1 (ENSACIG00000011909)	ENSACIG00000011913 #15	CKMT1A (ENSACIG00000011960)	ENSACIG00000011985	pdia3 (ENSACIG00000012011)	ENSACIG00000012040 #24	rlbp1b (ENSACIG00000012095)	ABHD2 (ENSACIG00000012109) #20	mfge8b (ENSACIG00000012133) #21	hapln3 (ENSACIG00000012185) #22	ENSACIG00000012195 #23	PPIP5K1 (ENSACIG00000012248)	ENSACIG00000012294	SCAMP2 (ENSACIG00000012315)	mpi (ENSACIG00000012340)	ENSACIG00000012370	myo9ab (ENSACIG00000012402)	OAZ2 (ENSACIG00000012607)
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007.e	ENSGT00390000017953.A	ENSGT00390000001280.a
Pomacentridae_A	ANCESTRAL SPECIES	9	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007.e	ENSGT00390000017953.A	ENSGT00390000001280.a
Amphiprion	ANCESTRAL SPECIES	4	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007.e	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000160121	ENSGT00940000166219
Clown anemonefish	MODERN SPECIES	1038										CKMT1A (ENSAOCG00000012193)	pdia3 (ENSAOCG00000012157)	ENSAOCG00000002636 #24	rlbp1b (ENSAOCG00000012075)	ABHD2 (ENSAOCG00000011956) #20	mfge8b (ENSAOCG00000011899) #21	hapln3 (ENSAOCG00000011860) #22	ENSAOCG00000011821 #23	PPIP5K1 (ENSAOCG00000011734)	ENSAOCG00000011655	scamp2 (ENSAOCG00000011641)	mpi (ENSAOCG00000011611)	plex9.2 (ENSAOCG00000011593)	ENSAOCG00000011576
Orange clownfish	MODERN SPECIES	18	ENSAPEG00000011509	uqcc6 (ENSAPEG00000011529)	ENSAPEG00000011539	samm50 (ENSAPEG00000011571)	api5 (ENSAPEG00000011647)	hsd17b12a (ENSAPEG00000011706)	alkbh3 (ENSAPEG00000011723)	si:ch1073-281m9.1 (ENSAPEG00000011759)	ENSAPEG00000011798 #15	ckmt1 (ENSAPEG00000011896)	pdia3 (ENSAPEG00000011926)	ENSAPEG00000012004 #24	rlbp1b (ENSAPEG00000012012)	ABHD2 (ENSAPEG00000012032) #20	mfge8b (ENSAPEG00000012106) #21	hapln3 (ENSAPEG00000012130) #22	ENSAPEG00000012155 #23	ENSAPEG00000012297 #23	PPIP5K1 (ENSAPEG00000012316)	ENSAPEG00000012402	ENSAPEG00000012411	scamp2 (ENSAPEG00000012420)	mpi (ENSAPEG00000012475)	plex9.2 (ENSAPEG00000012492)	myo9ab (ENSAPEG00000012501)	psma4 (ENSAPEG00000012616)	OAZ2 (ENSAPEG00000012634)	ppib (ENSAPEG00000012654)	adpgk (ENSAPEG00000012671)	snx22 (ENSAPEG00000012730)	cpa4 (ENSAPEG00000012746)
Spiny chromis	MODERN SPECIES	913													rlbp1b (ENSAPOG00000011281)	ABHD2 (ENSAPOG00000011242) #20	mfge8b (ENSAPOG00000011218) #21	hapln3 (ENSAPOG00000011207) #22	ENSAPOG00000011182 #23	PPIP5K1 (ENSAPOG00000011164)	ENSAPOG00000000307	ENSAPOG00000011049	ENSAPOG00000011044
Bicolor damselfish	MODERN SPECIES	257	uqcc6 (ENSSPAG00000020874)	ENSSPAG00000020868	samm50 (ENSSPAG00000020827)	api5 (ENSSPAG00000020763)	hsd17b12a (ENSSPAG00000020733)	alkbh3 (ENSSPAG00000020713)	si:ch1073-281m9.1 (ENSSPAG00000020705)	si:ch1073-281m9.1 (ENSSPAG00000020694)	ENSSPAG00000020648 #15	CKMT1A (ENSSPAG00000020621)	pdia3 (ENSSPAG00000020570)	ENSSPAG00000020558 #24	rlbp1b (ENSSPAG00000020541)	ABHD2 (ENSSPAG00000020514) #20	mfge8b (ENSSPAG00000020483) #21	hapln3 (ENSSPAG00000020472) #22	ACAN (ENSSPAG00000020439) #23	PPIP5K1 (ENSSPAG00000020287)	ENSSPAG00000020260	ENSSPAG00000020247	ENSSPAG00000020237	ENSSPAG00000020226
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000176053	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Tetraodontidae	ANCESTRAL SPECIES	32	ENSGT00390000000987.m	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00940000160682.b.c.a	ENSGT00940000157236.j	ENSGT00730000111146	ENSGT00940000168446	ENSGT01010000222336.b.a.b.b	ENSGT01030000234648.a.b.a.a.b.cb.a	ENSGT00390000018285	ENSGT01100000263518.B.b.b.a	ENSGT01020000230364.a.a.b.a.y.b
Fugu	MODERN SPECIES	21	ENSTRUG00000015289	c9h12orf73 (ENSTRUG00000031354)	ENSTRUG00000015293	api5 (ENSTRUG00000015347)	hsd17b12a (ENSTRUG00000015387)	ENSTRUG00000029343	alkbh3 (ENSTRUG00000021459)	ENSTRUG00000015457 #15	ckmt1 (ENSTRUG00000015493)	pdia3 (ENSTRUG00000015581)	ENSTRUG00000029532	ENSTRUG00000029320 #24	rlbp1b (ENSTRUG00000015662)	ABHD2 (ENSTRUG00000015701) #20	mfge8b (ENSTRUG00000015729) #21	hapln3 (ENSTRUG00000015776) #22	ENSTRUG00000015801 #23	ENSTRUG00000022686	ENSTRUG00000030597	ENSTRUG00000032289	scamp2 (ENSTRUG00000016067)	mpi (ENSTRUG00000016095)	TAFA5 (ENSTRUG00000024918)	ENSTRUG00000021466	brd1b (ENSTRUG00000016114)	ftsj1 (ENSTRUG00000016142)	ENSTRUG00000016156	ENSTRUG00000016158	pot1 (ENSTRUG00000016232)	ENSTRUG00000016271	SPAM1 (ENSTRUG00000022500)
Tetraodon	MODERN SPECIES	4	PIK3C2A (ENSTNIG00000003100)	NUCB2 (ENSTNIG00000003099)	ENSTNIG00000003098	TDG (ENSTNIG00000003097)	samm50 (ENSTNIG00000003096)	api5 (ENSTNIG00000003095)	hsd17b12a (ENSTNIG00000010384)	alkbh3 (ENSTNIG00000010385)	ENSTNIG00000010386 #15	ckmt1 (ENSTNIG00000010387)	pdia3 (ENSTNIG00000010388)	ENSTNIG00000010389 #24	rlbp1b (ENSTNIG00000010390)	ABHD2 (ENSTNIG00000010391) #20	mfge8b (ENSTNIG00000010392) #21	hapln3 (ENSTNIG00000010393) #22	ENSTNIG00000010394 #23	PPIP5K1 (ENSTNIG00000010395)	ENSTNIG00000010396	scamp2 (ENSTNIG00000010397)	mpi (ENSTNIG00000010398)	plex9.2 (ENSTNIG00000010399)	ENSTNIG00000010400	brd1b (ENSTNIG00000010401)	ftsj1 (ENSTNIG00000010402)	ENSTNIG00000010403	acot19 (ENSTNIG00000010404)	grm8b (ENSTNIG00000010405)	pot1 (ENSTNIG00000010406)	GPR37 (ENSTNIG00000010407)	HYAL4 (ENSTNIG00000000981)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Ballan wrasse	MODERN SPECIES	88	TDG (ENSLBEG00000003928)	uqcc6 (ENSLBEG00000003959)	ENSLBEG00000003974	samm50 (ENSLBEG00000004001)	api5 (ENSLBEG00000004053)	hsd17b12a (ENSLBEG00000004169)	alkbh3 (ENSLBEG00000004226)	si:ch1073-281m9.1 (ENSLBEG00000004252)	ENSLBEG00000004279 #15	ckmt1 (ENSLBEG00000004359)	pdia3 (ENSLBEG00000004419)	ENSLBEG00000004494 #24	rlbp1b (ENSLBEG00000004503)	ABHD2 (ENSLBEG00000004543) #20	mfge8b (ENSLBEG00000004610) #21	hapln3 (ENSLBEG00000004642) #22	ENSLBEG00000004679 #23	ENSLBEG00000004721	ENSLBEG00000004749	ENSLBEG00000004791	BET1L (ENSLBEG00000004861)	deaf1 (ENSLBEG00000004875)	drd4a (ENSLBEG00000004894)	ENSLBEG00000004906	GRAMD4 (ENSLBEG00000004928)	ENSLBEG00000004995	ENSLBEG00000005035	CERK (ENSLBEG00000005059)	ENSLBEG00000005077	ENSLBEG00000005092	TAFA5 (ENSLBEG00000005126)
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Perciformes	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Lumpfish	MODERN SPECIES	21	ENSCLMG00005020739	uqcc6 (ENSCLMG00005020750)	ENSCLMG00005020751	samm50 (ENSCLMG00005020753)	api5 (ENSCLMG00005020815)	hsd17b12a (ENSCLMG00005020820)	alkbh3 (ENSCLMG00005020821)	si:ch1073-281m9.1 (ENSCLMG00005000063)	ENSCLMG00005000095 #15	ckmt1 (ENSCLMG00005000160)	pdia3 (ENSCLMG00005000317)	ENSCLMG00005000332 #24	rlbp1b (ENSCLMG00005000333)	ABHD2 (ENSCLMG00005000336) #20	mfge8b (ENSCLMG00005000340) #21	hapln3 (ENSCLMG00005000483) #22	ENSCLMG00005000485 #23	PPIP5K1 (ENSCLMG00005000501)	ENSCLMG00005000517	scamp2 (ENSCLMG00005000521)	mpi (ENSCLMG00005000525)	ENSCLMG00005000528	MYO9A (ENSCLMG00005000602)	psma4 (ENSCLMG00005005198)	OAZ2 (ENSCLMG00005005203)	ppib (ENSCLMG00005005204)	adpgk (ENSCLMG00005005205)	snx22 (ENSCLMG00005005206)	ENSCLMG00005005207	AP3B2 (ENSCLMG00005005218)	ENSCLMG00005005835 ##35
Stickleback	MODERN SPECIES	14	si:dkey-10o6.2 (ENSGACG00000006806)	tdg.1 (ENSGACG00000006809)	TDG (ENSGACG00000006810)	samm50 (ENSGACG00000006822)	api5 (ENSGACG00000006871)	ENSGACG00000006927	hsd17b12a (ENSGACG00000006929)	alkbh3 (ENSGACG00000006950)	ENSGACG00000006985 #15	ckmt1 (ENSGACG00000006990)	pdia3 (ENSGACG00000007033)	ENSGACG00000007047 #24	rlbp1b (ENSGACG00000007054)	ABHD2 (ENSGACG00000007084) #20	mfge8b (ENSGACG00000007091) #21	hapln3 (ENSGACG00000007102) #22	ENSGACG00000007109 #23	PPIP5K1 (ENSGACG00000007114)	ENSGACG00000007133	MAP1A (ENSGACG00000007135)	scamp2 (ENSGACG00000007153)	mpi (ENSGACG00000007166)	plex9.2 (ENSGACG00000007185)	myo9ab (ENSGACG00000007186)	psma4 (ENSGACG00000007210)	OAZ2 (ENSGACG00000007234)	ppib (ENSGACG00000007238)	adpgk (ENSGACG00000007242)	snx22 (ENSGACG00000007247)	AP3B2 (ENSGACG00000007256)	ENSGACG00000007281 ##35
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000177561	ENSGT00940000158701.b	ENSGT01020000230648	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a
Channel bull blenny	MODERN SPECIES	20	ENSCGOG00000006690	uqcc6 (ENSCGOG00000006685)	ENSCGOG00000006682	samm50 (ENSCGOG00000006224)	pdia3 (ENSCGOG00000005622)	ckmt1 (ENSCGOG00000005584)	ENSCGOG00000005578 #15	si:ch1073-281m9.1 (ENSCGOG00000005577)	alkbh3 (ENSCGOG00000005573)	hsd17b12a (ENSCGOG00000005474)	api5 (ENSCGOG00000004892)	ENSCGOG00000004872 #24	rlbp1b (ENSCGOG00000004867)	ABHD2 (ENSCGOG00000004481) #20	mfge8b (ENSCGOG00000003761) #21	hapln3 (ENSCGOG00000003735) #22	ENSCGOG00000003729	ENSCGOG00000003727	scamp2 (ENSCGOG00000003722)	plex9.2 (ENSCGOG00000003721)	mpi (ENSCGOG00000003697)	ENSCGOG00000003686	ENSCGOG00000003684	myo9ab (ENSCGOG00000002505)	psma4 (ENSCGOG00000002430)	OAZ2 (ENSCGOG00000002426)	ppib (ENSCGOG00000002412)	adpgk (ENSCGOG00000002356)	ENSCGOG00000002353	ENSCGOG00000002351	AP3B2 (ENSCGOG00000001996)
Pike perch	MODERN SPECIES	126	tdg.1 (ENSSLUG00000015734)	ENSSLUG00000015694	uqcc6 (ENSSLUG00000015685)	ENSSLUG00000015679	samm50 (ENSSLUG00000015649)	api5 (ENSSLUG00000015460)	hsd17b12a (ENSSLUG00000015418)	alkbh3 (ENSSLUG00000015399)	si:ch1073-281m9.1 (ENSSLUG00000015390)	ckmt1 (ENSSLUG00000014928)	pdia3 (ENSSLUG00000014765)	ENSSLUG00000014745 #24	rlbp1b (ENSSLUG00000023843)	ABHD2 (ENSSLUG00000023832) #20	mfge8b (ENSSLUG00000023573) #21	hapln3 (ENSSLUG00000023550) #22	ENSSLUG00000023542 #23	ENSSLUG00000023538 #23	ENSSLUG00000023528
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Gilthead seabream	MODERN SPECIES	22	tdg.1 (ENSSAUG00010022898)	TDG (ENSSAUG00010022895)	ENSSAUG00010022892	ENSSAUG00010022891	samm50 (ENSSAUG00010022890)	api5 (ENSSAUG00010022888)	hsd17b12a (ENSSAUG00010022882)	alkbh3 (ENSSAUG00010022880)	ENSSAUG00010022879 #15	CKMT1A (ENSSAUG00010022645)	pdia3 (ENSSAUG00010022486)	ENSSAUG00010022482 #24	rlbp1b (ENSSAUG00010022481)	ABHD2 (ENSSAUG00010022477) #20	mfge8b (ENSSAUG00010022025) #21	hapln3 (ENSSAUG00010022019) #22	ACAN (ENSSAUG00010022009) #23	PPIP5K1 (ENSSAUG00010019615)	ENSSAUG00010019577	scamp2 (ENSSAUG00010019573)	mpi (ENSSAUG00010019571)	plex9.2 (ENSSAUG00010019569)	ENSSAUG00010019565	myo9ab (ENSSAUG00010017560)	psma4 (ENSSAUG00010017501)	OAZ2 (ENSSAUG00010017495)	ppib (ENSSAUG00010017487)	adpgk (ENSSAUG00010017481)	ENSSAUG00010017478	ENSSAUG00010017471	AP3B2 (ENSSAUG00010012265)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
European seabass	MODERN SPECIES	19	ENSDLAG00005004656	uqcc6 (ENSDLAG00005030725)	ENSDLAG00005029880	ENSDLAG00005004253	api5 (ENSDLAG00005003859)	hsd17b12a (ENSDLAG00005032372)	alkbh3 (ENSDLAG00005003779)	si:ch1073-281m9.1 (ENSDLAG00005003777)	ENSDLAG00005003757 #15	ENSDLAG00005003321	ENSDLAG00005002303	ENSDLAG00005002273 #24	rlbp1b (ENSDLAG00005012289)	ABHD2 (ENSDLAG00005002196) #20	mfge8b (ENSDLAG00005001662) #21	hapln3 (ENSDLAG00005001595) #22	ACAN (ENSDLAG00005001539) #23	ENSDLAG00005001455	ENSDLAG00005001426	scamp2 (ENSDLAG00005030568)	ENSDLAG00005001352	plex9.2 (ENSDLAG00005001335)	ENSDLAG00005001333	ENSDLAG00005025233	ENSDLAG00005025222	ENSDLAG00005025218	ENSDLAG00005032390	ENSDLAG00005025210	ENSDLAG00005026427	ENSDLAG00005025132	ENSDLAG00005025128 ##35
Large yellow croaker	MODERN SPECIES	485	ARSJ (ENSLCRG00005016400)	ENSLCRG00005015991	ANK2 (ENSLCRG00005007850)	mad2l1 (ENSLCRG00005006748)	pde5ab (ENSLCRG00005006281)	api5 (ENSLCRG00005006080)	hsd17b12a (ENSLCRG00005006024)	alkbh3 (ENSLCRG00005006006)	ENSLCRG00005005977 #15	CKMT1B (ENSLCRG00005005165)	pdia3 (ENSLCRG00005004817)	ENSLCRG00005004666 #24	rlbp1b (ENSLCRG00005004658)	ABHD2 (ENSLCRG00005004461) #20	mfge8b (ENSLCRG00005003686) #21	hapln3 (ENSLCRG00005003576) #22	ENSLCRG00005003563 #23	PPIP5K1 (ENSLCRG00005003398)	ENSLCRG00005003203	scamp2 (ENSLCRG00005003138)	mpi (ENSLCRG00005016777)	plex9.2 (ENSLCRG00005016776)	ENSLCRG00005016775	ENSLCRG00005016774	tdg.1 (ENSLCRG00005016772)	TDG (ENSLCRG00005016764)	uqcc6 (ENSLCRG00005016762)	ENSLCRG00005016761	samm50 (ENSLCRG00005016759)	ENSLCRG00005016757	ENSLCRG00005016756
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000023030	ENSMAMG00000023032	ENSMAMG00000023034	ENSMAMG00000023035	ENSMAMG00000023038	api5 (ENSMAMG00000023039)	HSD17B12 (ENSMAMG00000023049)	alkbh3 (ENSMAMG00000023051)	ENSMAMG00000023053 #15	ENSMAMG00000023055	ENSMAMG00000023056	ENSMAMG00000023057 #24	rlbp1b (ENSMAMG00000023058)	ABHD2 (ENSMAMG00000023059) #20	mfge8b (ENSMAMG00000023060) #21	hapln3 (ENSMAMG00000023061) #22	ENSMAMG00000023064 #23	ENSMAMG00000023066	ENSMAMG00000024923	scamp2 (ENSMAMG00000023071)	ENSMAMG00000023072	plex9.2 (ENSMAMG00000028276)	ENSMAMG00000025509	ENSMAMG00000023076	ENSMAMG00000023077	ENSMAMG00000027437	ENSMAMG00000023080	ENSMAMG00000023081	ENSMAMG00000023082	ENSMAMG00000023083	ENSMAMG00000024586
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Climbing perch	MODERN SPECIES	19	ENSATEG00000021899	uqcc6 (ENSATEG00000021890)	ENSATEG00000021880	ENSATEG00000021853	api5 (ENSATEG00000021818)	hsd17b12a (ENSATEG00000021797)	alkbh3 (ENSATEG00000021785)	si:ch1073-281m9.1 (ENSATEG00000021781)	ENSATEG00000021768 #15	ENSATEG00000021752	ENSATEG00000021726	ENSATEG00000021719 #24	rlbp1b (ENSATEG00000021710)	ABHD2 (ENSATEG00000021685) #20	mfge8b (ENSATEG00000021667) #21	hapln3 (ENSATEG00000021654) #22	ENSATEG00000021623 #23	ENSATEG00000021582	ENSATEG00000028756	scamp2 (ENSATEG00000021561)	ENSATEG00000021548	plex9.2 (ENSATEG00000021547)	ENSATEG00000025308	ENSATEG00000021489	ENSATEG00000021465	ENSATEG00000021433	ENSATEG00000021416	ENSATEG00000021407	ENSATEG00000021392	ENSATEG00000021323	ENSATEG00000021283
Siamese fighting fish	MODERN SPECIES	17	slc13a1 (ENSBSLG00000025222)	IQUB (ENSBSLG00000025223)	ASB15 (ENSBSLG00000025224)	ASB15 (ENSBSLG00000025225)	lmod2a (ENSBSLG00000025226)	wasla (ENSBSLG00000025232)	hyal6 (ENSBSLG00000025272)	HYAL4 (ENSBSLG00000025274)	ENSBSLG00000025276	SPAM1 (ENSBSLG00000025408)	GPR37 (ENSBSLG00000025434)	pot1 (ENSBSLG00000025472)	grm8b (ENSBSLG00000025590)	ABHD2 (ENSBSLG00000025813) #20	mfge8b (ENSBSLG00000025833) #21	hapln3 (ENSBSLG00000025847) #22	ENSBSLG00000025849	ENSBSLG00000025852 #23	PPIP5K1 (ENSBSLG00000026072)	ENSBSLG00000026209	ENSBSLG00000026214	ENSBSLG00000026224	ENSBSLG00000026251	ENSBSLG00000026292	ENSBSLG00000026315	ENSBSLG00000026318	ENSBSLG00000026395	BET1L (ENSBSLG00000026450)	deaf1 (ENSBSLG00000026455)	drd4a (ENSBSLG00000026458)	ENSBSLG00000026461
Carangaria	ANCESTRAL SPECIES	6	ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156817	ENSGT00950000182940.a ##35	ENSGT00940000155889.d
Tongue sole	MODERN SPECIES	16	tdg.1 (ENSCSEG00000000885)	uqcc6 (ENSCSEG00000000881)	ENSCSEG00000000877	ENSCSEG00000000872	samm50 (ENSCSEG00000000853)	api5 (ENSCSEG00000000841)	hsd17b12a (ENSCSEG00000000827)	alkbh3 (ENSCSEG00000000814)	ENSCSEG00000000807 #15	ckmt1 (ENSCSEG00000000803)	pdia3 (ENSCSEG00000000779)	ENSCSEG00000000768 #24	rlbp1b (ENSCSEG00000000759)	ABHD2 (ENSCSEG00000000745) #20	mfge8b (ENSCSEG00000000736) #21	hapln3 (ENSCSEG00000000732) #22	ENSCSEG00000000723 #23	PPIP5K1 (ENSCSEG00000000686)	ENSCSEG00000000678	dnaaf4 (ENSCSEG00000000642)	anpepb.1 (ENSCSEG00000000623) ##8	ANPEP (ENSCSEG00000000611) ##8	ENSCSEG00000000601 #35	ndrg4 (ENSCSEG00000000519)	gins3 (ENSCSEG00000000507)	znrf1 (ENSCSEG00000000498)	ldhd (ENSCSEG00000000485)	cetp (ENSCSEG00000000479)	chka (ENSCSEG00000000475)	si:dkey-12e7.1 (ENSCSEG00000000468)	utp4 (ENSCSEG00000000456)
Turbot	MODERN SPECIES	1	ENSSMAG00000004277	ENSSMAG00000004289	ENSSMAG00000031849	api5 (ENSSMAG00000004332)	hsd17b12a (ENSSMAG00000004377)	alkbh3 (ENSSMAG00000004404)	si:ch1073-281m9.1 (ENSSMAG00000004421)	ENSSMAG00000037494 #15	ENSSMAG00000004425 #15	ENSSMAG00000004451	pdia3 (ENSSMAG00000004475)	ENSSMAG00000004520 #24	rlbp1b (ENSSMAG00000004552)	ABHD2 (ENSSMAG00000004568) #20	mfge8b (ENSSMAG00000004623) #21	hapln3 (ENSSMAG00000004654) #22	ENSSMAG00000004747	ENSSMAG00000004794	ENSSMAG00000004814	ENSSMAG00000004852	ENSSMAG00000030933	ENSSMAG00000004881	ENSSMAG00000005090	ENSSMAG00000033066	ENSSMAG00000005130	ENSSMAG00000005148	ENSSMAG00000005169	ENSSMAG00000005199	cat (ENSSMAG00000005331)	syt12 (ENSSMAG00000005389)	ENSSMAG00000005416
Carangaria_A	ANCESTRAL SPECIES		ENSGT00390000000987.n	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b
Seriola	ANCESTRAL SPECIES	5	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00940000157742.a.r.a	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00940000177561	ENSGT00390000009048.a.a.h.d	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00550000074827.fb	ENSGT00940000157725	ENSGT00940000158007	ENSGT00390000017953.A	ENSGT00390000001280.a	ENSGT00940000156209.v.b	ENSGT00940000156817
Yellowtail amberjack	MODERN SPECIES	2263	uqcc6 (ENSSLDG00000003338)	ENSSLDG00000003330	samm50 (ENSSLDG00000003224)	api5 (ENSSLDG00000003146)	hsd17b12a (ENSSLDG00000003093)	alkbh3 (ENSSLDG00000003080)	si:ch1073-281m9.1 (ENSSLDG00000003060)	ENSSLDG00000003035	ENSSLDG00000003018 #15	CKMT1A (ENSSLDG00000002951)	pdia3 (ENSSLDG00000002871)	ENSSLDG00000002860 #24	rlbp1b (ENSSLDG00000002849)	ABHD2 (ENSSLDG00000002803) #20	mfge8b (ENSSLDG00000002751) #21	hapln3 (ENSSLDG00000002718) #22	ENSSLDG00000002693	ACAN (ENSSLDG00000002666) #23	ENSSLDG00000002644	PPIP5K1 (ENSSLDG00000002528)	ENSSLDG00000002488	scamp2 (ENSSLDG00000002442)	mpi (ENSSLDG00000002394)	ENSSLDG00000002379	myo9ab (ENSSLDG00000002238)	psma4 (ENSSLDG00000002201)	OAZ2 (ENSSLDG00000002187)	ppib (ENSSLDG00000002168)	adpgk (ENSSLDG00000002134)	snx22 (ENSSLDG00000002117)	dnai4 (ENSSLDG00000002067)
Greater amberjack	MODERN SPECIES	86	uqcc6 (ENSSDUG00000000763)	ENSSDUG00000000754	samm50 (ENSSDUG00000000669)	api5 (ENSSDUG00000000618)	hsd17b12a (ENSSDUG00000000526)	alkbh3 (ENSSDUG00000000513)	si:ch1073-281m9.1 (ENSSDUG00000000501)	ENSSDUG00000000489	ENSSDUG00000000473 #15	CKMT1A (ENSSDUG00000000430)	pdia3 (ENSSDUG00000000376)	ENSSDUG00000000366 #24	rlbp1b (ENSSDUG00000000340)	ABHD2 (ENSSDUG00000000276) #20	mfge8b (ENSSDUG00000000258) #21	hapln3 (ENSSDUG00000000223) #22	ENSSDUG00000000103 #23	ENSSDUG00000023584	PPIP5K1 (ENSSDUG00000023574)	ENSSDUG00000023569	scamp2 (ENSSDUG00000023562)	mpi (ENSSDUG00000023554)	myo9ab (ENSSDUG00000023523)	psma4 (ENSSDUG00000023519)	OAZ2 (ENSSDUG00000023517)	ppib (ENSSDUG00000023515)	adpgk (ENSSDUG00000023511)	ENSSDUG00000023509	dnai4 (ENSSDUG00000023503)	AP3B2 (ENSSDUG00000023496)	ENSSDUG00000023491 ##35
Barramundi perch	MODERN SPECIES	319	tdg.1 (ENSLCAG00010026031)	TDG (ENSLCAG00010026028)	uqcc6 (ENSLCAG00010026024)	ENSLCAG00010026018	samm50 (ENSLCAG00010025976)	api5 (ENSLCAG00010025907)	hsd17b12a (ENSLCAG00010025858)	alkbh3 (ENSLCAG00010025854)	si:ch1073-281m9.1 (ENSLCAG00010025849)	CKMT1A (ENSLCAG00010025790)	pdia3 (ENSLCAG00010025770)	ENSLCAG00010025752 #24	rlbp1b (ENSLCAG00010025749)	ABHD2 (ENSLCAG00010025745) #20	mfge8b (ENSLCAG00010025732) #21	hapln3 (ENSLCAG00010025728) #22	ACAN (ENSLCAG00010025726) #23	PPIP5K1 (ENSLCAG00010025636)
Pinecone sodierfish	MODERN SPECIES	20	CDK17 (ENSMMDG00005018465)	elk3 (ENSMMDG00005018420)	hal (ENSMMDG00005018417)	zgc:101783 (ENSMMDG00005018413)	hsd17b12a (ENSMMDG00005018395)	alkbh3 (ENSMMDG00005018388)	ENSMMDG00005018384	si:ch1073-281m9.1 (ENSMMDG00005018383)	ENSMMDG00005018380 #15	ckmt1 (ENSMMDG00005018331)	pdia3 (ENSMMDG00005018245)	ENSMMDG00005018236 #24	rlbp1b (ENSMMDG00005018231)	ABHD2 (ENSMMDG00005018226) #20	mfge8b (ENSMMDG00005018074) #21	hapln3 (ENSMMDG00005018067) #22	ENSMMDG00005018062 #23	PPIP5K1 (ENSMMDG00005016687)	ENSMMDG00005016614	ENSMMDG00005016609	scamp2 (ENSMMDG00005016607)	mpi (ENSMMDG00005016584)	plex9.2 (ENSMMDG00005016580)	ENSMMDG00005016577	myo9ab (ENSMMDG00005016568)	psma4 (ENSMMDG00005016523)	OAZ2 (ENSMMDG00005016515)	ppib (ENSMMDG00005016511)	adpgk (ENSMMDG00005016507)	snx22 (ENSMMDG00005016504)	ENSMMDG00005016501
Cod	MODERN SPECIES	22	ENSGMOG00000019092	uqcc6 (ENSGMOG00000035825)	ENSGMOG00000028062	ENSGMOG00000019103	api5 (ENSGMOG00000019118)	hsd17b12a (ENSGMOG00000019133)	alkbh3 (ENSGMOG00000019146)	si:ch1073-281m9.1 (ENSGMOG00000019160)	ENSGMOG00000019163 #15	ENSGMOG00000019196	ENSGMOG00000019203	ENSGMOG00000032618 #24	rlbp1b (ENSGMOG00000019212)	ABHD2 (ENSGMOG00000019225) #20	mfge8b (ENSGMOG00000019232) #21	hapln3 (ENSGMOG00000036173) #22	ENSGMOG00000019249 #23	ENSGMOG00000019258	ENSGMOG00000031046	scamp2 (ENSGMOG00000019326)	ENSGMOG00000019331	plex9.2 (ENSGMOG00000019335)	ENSGMOG00000017080	ENSGMOG00000032835	ENSGMOG00000026830	lrp5 (ENSGMOG00000016796)	ppp6r3 (ENSGMOG00000016852)	gal (ENSGMOG00000018363)	ENSGMOG00000012797	shank2b (ENSGMOG00000025746)	zgc:101566 (ENSGMOG00000029067)
Protacanthopterygii	ANCESTRAL SPECIES	79	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a	ENSGT00390000010991	ENSGT00940000154860.a.b	ENSGT00940000157226	ENSGT00390000016821	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b	ENSGT00910000144338	ENSGT00940000155425	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a #21	ENSGT00940000159628.d #22	ENSGT00940000155971.d.a.b #23	ENSGT00390000009048.a.a.h.c.b	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000158701.b	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b	ENSGT00940000159572.a.b	ENSGT00390000008748.b.g.a	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	481					ENSGT00390000000987.m.e	ENSGT00390000000987.n.c	ENSGT00390000011355.a.c	ENSGT00390000010991.u	ENSGT00940000154860.a.b.c	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b.e	ENSGT00940000155425.nb.a	ENSGT00940000160781.p #24	ENSGT00940000164526.b.a	ENSGT00940000156049.a.c.b #21	ENSGT00940000159628.d.e #22	ENSGT00940000155971.d.a.b.j #23	ENSGT00390000009048.a.a.h.c.b	ENSGT00940000158701.b.d	ENSGT00940000156476.h.f	ENSGT00390000016075.f	ENSGT00390000012715.f	ENSGT00390000012715.e	ENSGT00940000154905.i.b.g.b	ENSGT00940000159572.a.b.e	ENSGT00390000008748.b.g.a.g
Huchen	DUPLICATION
Huchen	MODERN SPECIES	11902																hapln3 (ENSHHUG00000019897) #22
Huchen	MODERN SPECIES	4844															mfge8b (ENSHHUG00000012717) #21	hapln3 (ENSHHUG00000012725) #22	ENSHHUG00000012734 #23	ENSHHUG00000012739	ENSHHUG00000012740 #23
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT00390000006485.c.tc.a	ENSGT00530000064192.i	ENSGT00940000161979.A.a.a.b.b	ENSGT00390000000987.m.e	ENSGT00390000000987.n.c	ENSGT00390000011355.a.c	ENSGT00390000010991.u	ENSGT00940000154860.a.b.c	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b.e	ENSGT01090000260373.d	ENSGT00940000155425.nb.a	ENSGT00940000160781.p #24	ENSGT00940000164526.b.a	ENSGT00940000156049.a.c.b #21	ENSGT00940000159628.d.e #22	ENSGT00940000155971.d.a.b.j #23	ENSGT00390000009048.a.a.h.c.b	ENSGT00940000158701.b.d	ENSGT00940000156476.h.f	ENSGT00390000016075.f	ENSGT00390000012715.f	ENSGT00390000012715.e.c	ENSGT00940000154905.i.b.g.b	ENSGT00940000159572.a.b.e	ENSGT00390000008748.b.g.a.g	ENSGT00980000202752	ENSGT00940000156052.k.b.e	ENSGT00390000001424.wb.a.b	ENSGT00950000183129.b.b.a.b	ENSGT00940000154743.B.o.b.e
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00390000000987.m.e	ENSGT00390000000987.n.c	ENSGT00390000011355.a.c	ENSGT00390000010991.u	ENSGT00940000154860.a.b.c	ENSGT00940000157226.c	ENSGT00390000016821.d	ENSGT00940000164807.A.h.a.b.b.b.b.b.b	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b.e	ENSGT01090000260373.d	ENSGT00940000155425.nb.a	ENSGT00940000160781.p #24	ENSGT00940000164526.b.a	ENSGT00940000156049.a.c.b #21	ENSGT00940000159628.d.e #22	ENSGT00940000155971.d.a.b.j #23	ENSGT00390000009048.a.a.h.c.b	ENSGT00940000158701.b.d	ENSGT00940000156476.h.f	ENSGT00390000012715.f	ENSGT00390000012715.e.c	ENSGT00940000154905.i.b.g.b	ENSGT00940000159572.a.b.e	ENSGT00390000008748.b.g.a.g	ENSGT00980000202752	ENSGT00940000156052.k.b.e	ENSGT00390000001424.wb.a.b	ENSGT00950000183129.b.b.a.b	ENSGT00940000154743.B.o.b.e	ENSGT00940000156195.q.a.t
Oncorhynchus_a	ANCESTRAL SPECIES	36	ENSGT00390000000987.m.e	ENSGT00390000000987.n.c	ENSGT01000000221190	ENSGT00390000011355.a.c	ENSGT00390000010991.u	ENSGT00940000154860.a.b.c	ENSGT00940000157226.c	ENSGT00390000016821.d	ENSGT00940000164807.A.h.a.b.b.b.b.b.b	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b.e	ENSGT00940000155425.nb.a	ENSGT00940000160781.p #24	ENSGT00940000164526.b.a	ENSGT00940000156049.a.c.b #21	ENSGT00940000159628.d.e #22	ENSGT00940000155971.d.a.b.j #23	ENSGT00390000009048.a.a.h.c.b	ENSGT00940000158701.b.d	ENSGT00390000012715.f	ENSGT00390000012715.e.c	ENSGT00390000008748.b.g.a.g	ENSGT00980000202752	ENSGT00940000156052.k.b.e	ENSGT00390000001424.wb.a.b	ENSGT00950000183129.b.b.a.b	ENSGT00940000154743.B.o.b.e	ENSGT00940000156195.q.a.t	ENSGT00970000197309	ENSGT00940000155357.a.b.b	ENSGT00940000157577.c.a.a
Chinook salmon	DUPLICATION
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	3043	ENSOTSG00005039781	tdg.1 (ENSOTSG00005039782)	ENSOTSG00005039785	samm50 (ENSOTSG00005039788)	api5 (ENSOTSG00005039824)	hsd17b12a (ENSOTSG00005039862)	ENSOTSG00005039863	si:ch1073-281m9.1 (ENSOTSG00005039864)	ENSOTSG00005039866	ENSOTSG00005039867 #15	ENSOTSG00005039876	pdia3 (ENSOTSG00005040886)	ENSOTSG00005040927 #24	rlbp1b (ENSOTSG00005040931)	mfge8b (ENSOTSG00005040934) #21	hapln3 (ENSOTSG00005040937) #22	ENSOTSG00005039774 #23	PPIP5K1 (ENSOTSG00005039775)	rabggtb (ENSOTSG00005039779)	acadm (ENSOTSG00005039816)	RPS8 (ENSOTSG00005041002)	hectd3 (ENSOTSG00005041005)	ENSOTSG00005041213	ndc1 (ENSOTSG00005041216)	zgc:113691 (ENSOTSG00005041217)
Chinook salmon	MODERN SPECIES		tdg.1 (ENSOTSG00005001348)	ENSOTSG00005001355	ENSOTSG00005001361	samm50 (ENSOTSG00005001368)	api5 (ENSOTSG00005001616)	hsd17b12a (ENSOTSG00005001618)	ENSOTSG00005001623	si:ch1073-281m9.1 (ENSOTSG00005001625)	ENSOTSG00005001627	ENSOTSG00005001628 #15	ENSOTSG00005001635	pdia3 (ENSOTSG00005003937)	ENSOTSG00005004079 #24	rlbp1b (ENSOTSG00005004085)	mfge8b (ENSOTSG00005004089) #21	hapln3 (ENSOTSG00005004091) #22	ENSOTSG00005004094 #23	PPIP5K1 (ENSOTSG00005004096)	ENSOTSG00005004100	rabggtb (ENSOTSG00005004103)	acadm (ENSOTSG00005004127)	RPS8 (ENSOTSG00005005706)	hectd3 (ENSOTSG00005005713)	ENSOTSG00005005869	ndc1 (ENSOTSG00005005872)	zgc:113691 (ENSOTSG00005005873)	ENSOTSG00005005875	LMO1 (ENSOTSG00005005876)	ENSOTSG00005005877	psma1 (ENSOTSG00005005883)	ENSOTSG00005005888
Chinook salmon	MODERN SPECIES	14	tdg.1 (ENSOTSG00005019960)	ENSOTSG00005019959	ENSOTSG00005019958	samm50 (ENSOTSG00005019536)	api5 (ENSOTSG00005019535)	hsd17b12a (ENSOTSG00005019534)	ENSOTSG00005019533	si:ch1073-281m9.1 (ENSOTSG00005019532)	ENSOTSG00005019531	ENSOTSG00005019530 #15	ckmt1 (ENSOTSG00005019243)	pdia3 (ENSOTSG00005019081)	ENSOTSG00005019055 #24	rlbp1b (ENSOTSG00005019054)	mfge8b (ENSOTSG00005019050) #21	hapln3 (ENSOTSG00005019046) #22	ENSOTSG00005019043 #23	PPIP5K1 (ENSOTSG00005019041)	prdm8b (ENSOTSG00005019039)	fgf5 (ENSOTSG00005019036)	ENSOTSG00005015796	irf10 (ENSOTSG00005015790)	ENSOTSG00005015789	ENSOTSG00005015788	ENSOTSG00005015779	ENSOTSG00005015776	SS18L1 (ENSOTSG00005015768)	PSMA7 (ENSOTSG00005015767)	lsm14b (ENSOTSG00005015766)	TAF4 (ENSOTSG00005015738)	CDH4 (ENSOTSG00005013894)
Coho salmon	MODERN SPECIES	1	ENSOKIG00005009705	ENSOKIG00005009687	ENSOKIG00005009676	SAMM50 (ENSOKIG00005009607)	api5 (ENSOKIG00005009496)	hsd17b12a (ENSOKIG00005009464)	alkbh3 (ENSOKIG00005009402)	si:ch1073-281m9.1 (ENSOKIG00005009385)	ENSOKIG00005009381	ENSOKIG00005009369 #15	ckmt1 (ENSOKIG00005008013)	pdia3 (ENSOKIG00005007789)	ENSOKIG00005007750 #24	ENSOKIG00005007726	mfge8b (ENSOKIG00005007559) #21	hapln3 (ENSOKIG00005007546) #22	ENSOKIG00005007438 #23	PPIP5K1 (ENSOKIG00005004622)	ENSOKIG00005004192	plex9.2 (ENSOKIG00005004185)	ENSOKIG00005004179	ENSOKIG00005004175	ENSOKIG00005004170	ENSOKIG00005002494	ENSOKIG00005002169	ENSOKIG00005002148	ZNF609 (ENSOKIG00005002130)	ENSOKIG00005002119	arid3b (ENSOKIG00005002105)	ENSOKIG00005002081	ENSOKIG00005001979
Rainbow trout	MODERN SPECIES	22	ENSOMYG00000055903	finTRIM (ENSOMYG00000071957)	ENSOMYG00000030241	ENSOMYG00000030226	ENSOMYG00000030206	ENSOMYG00000030132	ENSOMYG00000030104	ENSOMYG00000071876	ENSOMYG00000030010 #15	ENSOMYG00000029252	ENSOMYG00000070993	ENSOMYG00000028929	ENSOMYG00000028816 #24	rlbp1b (ENSOMYG00000028803)	mfge8b (ENSOMYG00000028566) #21	hapln3 (ENSOMYG00000028355) #22	ENSOMYG00000028198 #23	ENSOMYG00000027848	ENSOMYG00000074089	ENSOMYG00000067394	ENSOMYG00000047914	ENSOMYG00000027485	ENSOMYG00000027472	ENSOMYG00000053143	ENSOMYG00000027448	ENSOMYG00000027427	ENSOMYG00000076384	ENSOMYG00000054921	arid3b (ENSOMYG00000027369)	cox5aa (ENSOMYG00000027348)	ENSOMYG00000027214
Salmo	ANCESTRAL SPECIES	50	ENSGT00530000064192.i	ENSGT00940000161979.A.a.a.b.b	ENSGT00390000000987.m.e	ENSGT00390000000987.n.c	ENSGT00390000011355.a.c	ENSGT00390000010991.u	ENSGT00940000154860.a.b.c.a	ENSGT01090000260030.b.g	ENSGT00390000005222 #15	ENSGT00950000182772.B.a.b.e	ENSGT01090000260373.d	ENSGT00940000155425.nb.a	ENSGT00940000160781.p #24	ENSGT00940000164526.b.a	ENSGT00940000156049.a.c.b #21	ENSGT00940000159628.d.e #22	ENSGT00940000155971.d.a.b.j #23	ENSGT00390000009048.a.a.h.c.b	ENSGT00940000158701.b.d	ENSGT00940000156476.h.f	ENSGT00390000016075.f	ENSGT00390000012715.f	ENSGT00390000012715.e.c	ENSGT00940000154905.i.b.g.b	ENSGT00940000159572.a.b.e	ENSGT00390000008748.b.g.a.g	ENSGT00980000202752	ENSGT01080000259423	ENSGT00940000156052.k.b.e	ENSGT00390000001424.wb.a.b	ENSGT00950000183129.b.b.a.b
River trout	MODERN SPECIES	33	tdg.1 (ENSSTUG00000011466)	TDG (ENSSTUG00000011520)	samm50 (ENSSTUG00000011581)	api5 (ENSSTUG00000011868)	hsd17b12a (ENSSTUG00000011934)	ENSSTUG00000011954 #15	si:ch1073-281m9.1 (ENSSTUG00000011971)	ENSSTUG00000011992	ENSSTUG00000011994 #15	ckmt1 (ENSSTUG00000012030)	ENSSTUG00000012626	pdia3 (ENSSTUG00000012642)	ENSSTUG00000012726 #24	rlbp1b (ENSSTUG00000012741)	mfge8b (ENSSTUG00000012778) #21	hapln3 (ENSSTUG00000013295) #22	ENSSTUG00000013313 #23	PPIP5K1 (ENSSTUG00000013370)	ENSSTUG00000013630	scamp2 (ENSSTUG00000013644)	mpi (ENSSTUG00000013671)	plex9.2 (ENSSTUG00000013679)	ENSSTUG00000013690	myo9ab (ENSSTUG00000013734)	ENSSTUG00000014324	ENSSTUG00000014335	ENSSTUG00000014339	ENSSTUG00000014341	znf609a (ENSSTUG00000014358)	ENSSTUG00000014374	ENSSTUG00000014379
Salmoninae	ANCESTRAL SPECIES	59	ENSGT00390000000987.n.d	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a.d	ENSGT00390000010991.v	ENSGT00940000154860.a.b.d	ENSGT00940000157226	ENSGT00390000016821.c	ENSGT00950000182772.B.a.b.f	ENSGT00910000144338	ENSGT00940000155425.nb.b	ENSGT00940000160781.o #24	ENSGT00940000164526.b.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a.c.a #21	ENSGT00940000159628.d.f #22	ENSGT00940000155971.d.a.b.i #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000158701.b.c	ENSGT00940000156476.h.e	ENSGT00390000016075.e	ENSGT00940000154905.i.b.g.a	ENSGT00940000159572.a.b.f	ENSGT00390000008748.b.g.a.h	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157859.a.b	ENSGT00940000164138.c
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00390000000987.n.d	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a.d	ENSGT00390000010991.v	ENSGT00940000154860.a.b.d	ENSGT00940000157226	ENSGT00390000016821.c	ENSGT00950000182772.B.a.b.f	ENSGT00910000144338	ENSGT00940000155425.nb.b	ENSGT00940000160781.o #24	ENSGT00940000164526.b.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a.c.a #21	ENSGT00940000159628.d.f #22	ENSGT00940000155971.d.a.b.i #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000158701.b.c	ENSGT00940000156476.h.e	ENSGT00390000016075.e	ENSGT00940000154905.i.b.g.a	ENSGT00940000159572.a.b.f	ENSGT00390000008748.b.g.a.h	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157859.a.b	ENSGT00940000164138.c
Salmo	ANCESTRAL SPECIES	50	ENSGT00390000000987.n.d	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a.d	ENSGT00390000010991.v	ENSGT00940000154860.a.b.d	ENSGT00940000157226	ENSGT00390000016821.c	ENSGT00950000182772.B.a.b.f	ENSGT00910000144338	ENSGT00940000155425.nb.b	ENSGT00940000160781.o #24	ENSGT00940000164526.b.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a.c.a #21	ENSGT00940000159628.d.f #22	ENSGT00940000155971.d.a.b.i #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000158701.b.c	ENSGT00940000156476.h.e	ENSGT00390000016075.e	ENSGT00940000154905.i.b.g.a	ENSGT00940000159572.a.b.f	ENSGT00390000008748.b.g.a.h	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157859.a.b	ENSGT00940000164138.c
River trout	MODERN SPECIES	37	ENSSTUG00000018323	uqcc6 (ENSSTUG00000018338)	ENSSTUG00000018346	samm50 (ENSSTUG00000018364)	api5 (ENSSTUG00000018508)	hsd17b12a (ENSSTUG00000018595)	alkbh3 (ENSSTUG00000018620)	si:ch1073-281m9.1 (ENSSTUG00000018652)	ENSSTUG00000018683	CATSPER2 (ENSSTUG00000018848)	pdia3 (ENSSTUG00000018931)	ENSSTUG00000019369 #24	rlbp1b (ENSSTUG00000019384)	abhd2b (ENSSTUG00000019429) #20	mfge8b (ENSSTUG00000019664) #21	hapln3 (ENSSTUG00000020580) #22	ENSSTUG00000020588 #23	PPIP5K1 (ENSSTUG00000020682)	ENSSTUG00000020903	scamp2 (ENSSTUG00000020916)	mpi (ENSSTUG00000020963)	myo9ab (ENSSTUG00000021165)	ENSSTUG00000027183	znf609a (ENSSTUG00000027195)	ENSSTUG00000027205	ENSSTUG00000027216	spg11 (ENSSTUG00000027292)	ENSSTUG00000028092	ciao2a (ENSSTUG00000028104)	ENSSTUG00000028120	CALML4 (ENSSTUG00000028126)
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000038954	ENSSSAG00000105533	ENSSSAG00000009558	ENSSSAG00000073923	api5 (ENSSSAG00000073800)	hsd17b12 (ENSSSAG00000073776)	alkbh3 (ENSSSAG00000073769)	si:ch1073-281m9.1 (ENSSSAG00000073763)	ENSSSAG00000073723	CATSPER2 (ENSSSAG00000073703)	ENSSSAG00000073640	isg20 (ENSSSAG00000073634) #24	rlbp1b (ENSSSAG00000010500)	abhd2b (ENSSSAG00000073625) #20	mfge8b (ENSSSAG00000010621) #21	hapln3 (ENSSSAG00000073362) #22	ACAN (ENSSSAG00000073259) #23	ENSSSAG00000083420	ENSSSAG00000072949	ENSSSAG00000112088	scamp2 (ENSSSAG00000072876)	ENSSSAG00000072874	ENSSSAG00000119636	ENSSSAG00000070797	ENSSSAG00000070742	znf609a (ENSSSAG00000070736)	ENSSSAG00000118796	ENSSSAG00000070733	ENSSSAG00000069636	spg11 (ENSSSAG00000067190)	ciao2a (ENSSSAG00000082537)
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00390000000987.n.d	ENSGT00390000007685	ENSGT00940000154487.B	ENSGT00390000011355.a.d	ENSGT00390000010991.v	ENSGT00940000154860.a.b.d	ENSGT00940000157226.d	ENSGT00390000016821.c	ENSGT00950000182772.B.a.b.f	ENSGT00910000144338	ENSGT00940000155425.nb.b	ENSGT00940000160781.o #24	ENSGT00940000164526.b.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a.c.a #21	ENSGT00940000159628.d.f #22	ENSGT00940000155971.d.a.b.i #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000158701.b.c	ENSGT00940000156476.h.e	ENSGT00390000016075.e	ENSGT00940000154905.i.b.g.a	ENSGT00940000159572.a.b.f	ENSGT00390000008748.b.g.a.h	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157859.a.b	ENSGT00940000157859.a.a.c
Rainbow trout	MODERN SPECIES	11	uqcc6 (ENSOMYG00000028840)	ENSOMYG00000028830	ENSOMYG00000028536	api5 (ENSOMYG00000028394)	hsd17b12a (ENSOMYG00000028328)	alkbh3 (ENSOMYG00000028287)	si:ch1073-281m9.1 (ENSOMYG00000028271)	ENSOMYG00000028065	CATSPER2 (ENSOMYG00000027928)	ENSOMYG00000027805	ENSOMYG00000027726 #24	rlbp1b (ENSOMYG00000027702)	ENSOMYG00000075198	abhd2b (ENSOMYG00000027668) #20	mfge8b (ENSOMYG00000026872) #21	hapln3 (ENSOMYG00000026651) #22	ENSOMYG00000026624 #23	ENSOMYG00000026419	ENSOMYG00000056012	ENSOMYG00000026257	ENSOMYG00000026246	ENSOMYG00000036432	ENSOMYG00000035857	ENSOMYG00000067046	znf609a (ENSOMYG00000035828)	ENSOMYG00000035807	ENSOMYG00000035045	ENSOMYG00000069860	spg11 (ENSOMYG00000034201)	ciao2a (ENSOMYG00000033988)	ENSOMYG00000033973
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00390000000987.n.d	ENSGT00940000173873	ENSGT00940000154487.B	ENSGT00390000011355.a.d	ENSGT00390000010991.v	ENSGT00940000154860.a.b.d	ENSGT00940000157226.d	ENSGT00390000016821.c	ENSGT00950000182772.B.a.b.f	ENSGT00910000144338	ENSGT00940000155425.nb.b	ENSGT00940000160781.o #24	ENSGT00940000164526.b.b	ENSGT00950000182902.b.a.d.b.b.b #20	ENSGT00940000156049.a.c.a #21	ENSGT00940000159628.d.f #22	ENSGT00940000155971.d.a.b.i #23	ENSGT00390000009048.a.a.h.c.a	ENSGT00940000158701.b.c	ENSGT00940000156476.h.e	ENSGT00390000016075.e	ENSGT00940000154905.i.b.g.a	ENSGT00940000159572.a.b.f	ENSGT00390000008748.b.g.a.h	ENSGT00940000164099.a.b	ENSGT00940000154617.B.d	ENSGT00390000016791	ENSGT00390000017697.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157859.a.b	ENSGT00400000022240
Coho salmon	MODERN SPECIES	14	TDG (ENSOKIG00005032096)	ENSOKIG00005032115	ENSOKIG00005032127	SAMM50 (ENSOKIG00005032297)	api5 (ENSOKIG00005032354)	hsd17b12a (ENSOKIG00005032428)	alkbh3 (ENSOKIG00005032440)	si:ch1073-281m9.1 (ENSOKIG00005032451)	ENSOKIG00005032470	CATSPER2 (ENSOKIG00005032798)	ENSOKIG00005032927	ENSOKIG00005033093 #24	rlbp1b (ENSOKIG00005033111)	abhd2b (ENSOKIG00005033186) #20	mfge8b (ENSOKIG00005033281) #21	hapln3 (ENSOKIG00005033620) #22	ENSOKIG00005033638 #23	PPIP5K1 (ENSOKIG00005033726)	ENSOKIG00005033976	scamp2 (ENSOKIG00005033985)	mpi (ENSOKIG00005034018)	myo9ab (ENSOKIG00005034184)	ENSOKIG00005036809	znf609a (ENSOKIG00005036816)	ENSOKIG00005036826	ENSOKIG00005036834	ENSOKIG00005036842	ENSOKIG00005036881	spg11 (ENSOKIG00005037773)	ciao2a (ENSOKIG00005039642)	ENSOKIG00005039685
Huchen	MODERN SPECIES	795	TDG (ENSHHUG00000038031)	uqcc6 (ENSHHUG00000038023)	ENSHHUG00000038019	samm50 (ENSHHUG00000037985)	api5 (ENSHHUG00000037977)	hsd17b12a (ENSHHUG00000037941)	alkbh3 (ENSHHUG00000037921)	si:ch1073-281m9.1 (ENSHHUG00000037919)	ENSHHUG00000037742	CATSPER2 (ENSHHUG00000037710)	pdia3 (ENSHHUG00000037429)	ENSHHUG00000037426 #24	rlbp1b (ENSHHUG00000037419)	abhd2b (ENSHHUG00000037413) #20	mfge8b (ENSHHUG00000037350) #21	hapln3 (ENSHHUG00000037343) #22	ENSHHUG00000037332 #23	PPIP5K1 (ENSHHUG00000037326)
Northern pike	MODERN SPECIES	18	ENSELUG00000026568	samm50 (ENSELUG00000003354)	api5 (ENSELUG00000003310)	hsd17b12a (ENSELUG00000003288)	ALKB3 (ENSELUG00000003260)	si:ch1073-281m9.1 (ENSELUG00000003248)	ENSELUG00000024185	ENSELUG00000003234 #15	ckmt1 (ENSELUG00000001605)	CATSPER2 (ENSELUG00000003165)	pdia3 (ENSELUG00000000103)	ENSELUG00000003116 #24	rlbp1b (ENSELUG00000003104)	abhd2b (ENSELUG00000028609) #20	mfge8b (ENSELUG00000003093) #21	hapln3 (ENSELUG00000003082) #22	ACAN (ENSELUG00000028766) #23	ENSELUG00000028865	PPIP5K1 (ENSELUG00000003069)	ENSELUG00000003024	scamp2 (ENSELUG00000000090)	mpi (ENSELUG00000003005)	ENSELUG00000002996	plex9.2 (ENSELUG00000029295)	myo9ab (ENSELUG00000002979)	ENSELUG00000002951	znf609a (ENSELUG00000002928)	ENSELUG00000030374	ENSELUG00000002883	ENSELUG00000002869	spg11 (ENSELUG00000002847)
Osteoglossiformes	ANCESTRAL SPECIES	13	ENSGT00940000159749 #14	ENSGT00940000177011	ENSGT00950000182844.b.b.b.c #16	ENSGT00940000158927	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220.c	ENSGT00950000182772.B.a.b	ENSGT00950000182957.a.a.b	ENSGT00940000164669.d	ENSGT00940000155425.pb.b	ENSGT00940000160781 #24	ENSGT00940000164526.b	ENSGT00950000182902.b.a.c.b #20	ENSGT00940000156049.b #21	ENSGT00940000159628 #22	ENSGT00940000155971.d.a #23	ENSGT00390000009048.a.a.e	ENSGT00940000158701.a.g	ENSGT00390000011891	ENSGT00940000156677	ENSGT00940000158376	ENSGT00390000018319.a.a.a.b.a	ENSGT00390000018319.b.a	ENSGT00950000183076.a.b.b.a.a	ENSGT00390000010652.C	ENSGT00940000160456	ENSGT01030000234623.a.b.b	ENSGT00390000008502.q	ENSGT00390000011608	ENSGT00940000156813
Asian bonytongue	MODERN SPECIES	2	mrpl46 (ENSSFOG00015028871) #27	kif7 (ENSSFOG00015018916) #14	rhcga (ENSSFOG00015018883) #16	cib1 (ENSSFOG00015018869)	MAN2A2 (ENSSFOG00015018761)	fes (ENSSFOG00015018721)	FURIN (ENSSFOG00015018595)	ckmt1 (ENSSFOG00015018546)	ENSSFOG00015018499	ENSSFOG00015024917	slc39a1 (ENSSFOG00015018485)	ENSSFOG00015018481 #24	rlbp1b (ENSSFOG00015018463)	ABHD2 (ENSSFOG00015018439) #20	mfge8a (ENSSFOG00015018364) #21	hapln3 (ENSSFOG00015018337) #22	PPIP5K1 (ENSSFOG00015018209)	MAP1A (ENSSFOG00015018175)	tp53bp1 (ENSSFOG00015018026)	tubgcp4 (ENSSFOG00015017947)	cdkn2aip (ENSSFOG00015027291)	ENSSFOG00015017923	ENSSFOG00015029180	iqgap1 (ENSSFOG00015017794)	CRTC3 (ENSSFOG00015031969)	ENSSFOG00015017735	SERINC4 (ENSSFOG00015017710)	hypk (ENSSFOG00015017699)	hddc3 (ENSSFOG00015017685)	vps33b (ENSSFOG00015017587)	prc1b (ENSSFOG00015017523)
P. kingsleyae	MODERN SPECIES	14	ENSPKIG00000014399	rhcga (ENSPKIG00000014418) #16	ENSPKIG00000014449	cib1 (ENSPKIG00000014465)	MAN2A2 (ENSPKIG00000014535)	fes (ENSPKIG00000014722)	FURIN (ENSPKIG00000014806)	ckmt1 (ENSPKIG00000014895)	STRC (ENSPKIG00000014961)	slc39a1 (ENSPKIG00000015087)	pdia3 (ENSPKIG00000015125)	ENSPKIG00000015180 #24	rlbp1b (ENSPKIG00000015226)	ABHD2 (ENSPKIG00000015304) #20	mfge8a (ENSPKIG00000015338) #21	hapln3 (ENSPKIG00000015365) #22	ACAN (ENSPKIG00000015394) #23	PPIP5K1 (ENSPKIG00000015535)	ENSPKIG00000015839	MAP1A (ENSPKIG00000015873)	tp53bp1 (ENSPKIG00000015980)	tubgcp4 (ENSPKIG00000016146)	cdkn2aip (ENSPKIG00000016219)	ENSPKIG00000016239	iqgap1 (ENSPKIG00000016330)	ENSPKIG00000016547	ENSPKIG00000016593	hypk (ENSPKIG00000016636)	hddc3 (ENSPKIG00000016651)	vps33b (ENSPKIG00000016695)	prc1b (ENSPKIG00000016779)
Spotted gar	MODERN SPECIES	669	scamp5a (ENSLOCG00000014265)	ppcdc (ENSLOCG00000014263)	ENSLOCG00000014260	PEAK1 (ENSLOCG00000014257)	hmg20a (ENSLOCG00000014255)	lingo1b (ENSLOCG00000017948)	CSPG4 (ENSLOCG00000014254)	snx33 (ENSLOCG00000014253)	ENSLOCG00000014250	ENSLOCG00000014249	pdia3 (ENSLOCG00000014242)	ENSLOCG00000014240 #24	rlbp1a (ENSLOCG00000014238)	abhd2a (ENSLOCG00000014235) #20	mfge8b (ENSLOCG00000014224) #21	hapln3 (ENSLOCG00000014221) #22	ACAN (ENSLOCG00000014218) #23	PPIP5K1 (ENSLOCG00000014203)	MAP1A (ENSLOCG00000014199)	tp53bp1 (ENSLOCG00000014193)	tubgcp4 (ENSLOCG00000014183)	cdkn2aip (ENSLOCG00000014181)	cart3 (ENSLOCG00000014180)	ENSLOCG00000014179	iqgap1 (ENSLOCG00000014170)	CRTC3 (ENSLOCG00000014162)	ADAMTSL5 (ENSLOCG00000014158)	SERINC4 (ENSLOCG00000014156)	hypk (ENSLOCG00000014153)	mfap1 (ENSLOCG00000014150)	hddc3 (ENSLOCG00000014146)
Reedfish	MODERN SPECIES	8	ENSECRG00000020535 #28	mrpl46 (ENSECRG00000020543) #27	mrps11 (ENSECRG00000020555) #26	det1 (ENSECRG00000020568)	kif7 (ENSECRG00000020590) #14	fanci (ENSECRG00000020649) #18	POLG (ENSECRG00000020703) #17	rhcgb (ENSECRG00000020750) #16	gdpgp1 (ENSECRG00000020820)	cib1 (ENSECRG00000020875)	ENSECRG00000020912	unc45a (ENSECRG00000020949)	MAN2A2 (ENSECRG00000021014)	abhd2a (ENSECRG00000021064) #20	mfge8b (ENSECRG00000021341) #21	hapln3 (ENSECRG00000021373) #22	ENSECRG00000021388 #23	ENSECRG00000021398 #23	PPIP5K1 (ENSECRG00000021458)	ENSECRG00000021583	mpi (ENSECRG00000021591)	scamp2l (ENSECRG00000021611)	neo1a (ENSECRG00000021637)	ENSECRG00000021688	roraa (ENSECRG00000021717)	ENSECRG00000021762	ENSECRG00000021778	OTUD7A (ENSECRG00000021812)	klf13 (ENSECRG00000021871)	rbpms2b (ENSECRG00000021907)	psma4 (ENSECRG00000021960)
Elephant shark	MODERN SPECIES	1696									fanci (ENSCMIG00000010622) #18	POLG (ENSCMIG00000010560) #17	rhcgb (ENSCMIG00000010551) #16	ENSCMIG00000010546 #15	RLBP1 (ENSCMIG00000010544) #19	abhd2a (ENSCMIG00000010514) #20	mfge8b (ENSCMIG00000010500) #21	hapln3 (ENSCMIG00000010496) #22	ENSCMIG00000010493	ENSCMIG00000010488 #23	ENSCMIG00000010484 #9	ENSCMIG00000010481 #11	ENSCMIG00000010479 #12	ENSCMIG00000010477	rgma (ENSCMIG00000010476)	chd2 (ENSCMIG00000010071)	ENSCMIG00000009954	ENSCMIG00000009952	slco3a1a (ENSCMIG00000009932) #36	sv2ba (ENSCMIG00000009875) #35	ENSCMIG00000009859 ##34	ENSCMIG00000009856 ##34	ENSCMIG00000009850 ##34
Cyclostomata	ANCESTRAL SPECIES	683																ENSGT00940000159628 #22	ENSGT00940000155971.y #23
Hagfish	MODERN SPECIES	756														ENSEBUG00000002374 #15	cox7c (ENSEBUG00000001424)	hapln3 (ENSEBUG00000002925) #22	ENSEBUG00000002931 #23