Muroidea_A	DUPLICATION
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00730000111529 #28	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000163607	ENSGT00940000158342.b #32	ENSGT00390000018272 #34	ENSGT00940000157538 #35	ENSGT00730000111039.C #36	ENSGT00500000044938 #37	ENSGT00920000149095.b	ENSGT00940000155352
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491 #16	ENSGT00540000070023.d.s ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00730000111529 #28	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000158342.b #32	ENSGT00390000018272 #34	ENSGT00940000157538 #35	ENSGT00730000111039.C #36	ENSGT00500000044938 #37	ENSGT00920000149095.b	ENSGT00940000155352	ENSGT00640000091574
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491 #16	ENSGT00540000070023.d.s ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00730000111529 #28	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000158342.b #32	ENSGT00390000018272 #34	ENSGT00940000157538 #35	ENSGT00730000111039.C #36	ENSGT00500000044938 #37	ENSGT00920000149095.b	ENSGT00940000155352	ENSGT00640000091574
Prairie vole	MODERN SPECIES	10	Usp44 (ENSMOCG00000020189)	ENSMOCG00000013555	ENSMOCG00000020971	Vezt (ENSMOCG00000000685)	Fgd6 (ENSMOCG00000017458) #7	Nr2c1 (ENSMOCG00000006925) #8	Ndufa12 (ENSMOCG00000013678) #9	Tmcc3 (ENSMOCG00000012369) #10	Cep83 (ENSMOCG00000010672) #11	Plxnc1 (ENSMOCG00000014781) #12	Cradd (ENSMOCG00000000329) #13	ENSMOCG00000019732 #15	ENSMOCG00000013541 #16	Nudt4 (ENSMOCG00000003024) #18	Eea1 (ENSMOCG00000008700) #21	Btg1 (ENSMOCG00000012463) #22	Dcn (ENSMOCG00000011845) #24	Lum (ENSMOCG00000001159) #25	Kera (ENSMOCG00000020045) #26	Epyc (ENSMOCG00000008447) #27	Ccer1 (ENSMOCG00000009249) #28	Atp2b1 (ENSMOCG00000012513) #29	Poc1b (ENSMOCG00000015822) #30	Dusp6 (ENSMOCG00000011753) #32	ENSMOCG00000003349	Kitl (ENSMOCG00000018911) #34	Tmtc3 (ENSMOCG00000007538) #35	Cep290 (ENSMOCG00000010037) #36	4930430F08Rik (ENSMOCG00000021234) #37	1700017N19Rik (ENSMOCG00000017688)	Mgat4c (ENSMOCG00000012409)
Northern American deer mouse	MODERN SPECIES	9	ENSPEMG00000027065	Fgd6 (ENSPEMG00000000975) #7	Nr2c1 (ENSPEMG00000011087) #8	Ndufa12 (ENSPEMG00000023653) #9	Tmcc3 (ENSPEMG00000022879) #10	Cep83 (ENSPEMG00000019426) #11	Plxnc1 (ENSPEMG00000019499) #12	ENSPEMG00000021950	Cradd (ENSPEMG00000013349) #13	Socs2 (ENSPEMG00000027596) #15	ENSPEMG00000020562 #16	ENSPEMG00000029432 ##17	Nudt4 (ENSPEMG00000021026) #18	Eea1 (ENSPEMG00000010629) #21	ENSPEMG00000003344	Btg1 (ENSPEMG00000030029) #22	Dcn (ENSPEMG00000019308) #24	Lum (ENSPEMG00000019303) #25	Kera (ENSPEMG00000013253) #26	Epyc (ENSPEMG00000019173) #27	Ccer1 (ENSPEMG00000019732) #28	ENSPEMG00000019550 #29	Poc1b (ENSPEMG00000020051) #30	Dusp6 (ENSPEMG00000026221) #32	Kitl (ENSPEMG00000019688) #34	Tmtc3 (ENSPEMG00000000749) #35	Cep290 (ENSPEMG00000008348) #36	4930430F08Rik (ENSPEMG00000016254) #37	1700017N19Rik (ENSPEMG00000010447)	Slc6a15 (ENSPEMG00000010154)	Lrriq1 (ENSPEMG00000012353)
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491 #16	ENSGT00540000070023.c.a.a ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00730000111529 #28	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000158342.b #32	ENSGT00390000018272 #34	ENSGT00940000157538 #35	ENSGT00730000111039.C #36	ENSGT00500000044938 #37	ENSGT00920000149095.b	ENSGT00940000155352	ENSGT00640000091574
Chinese hamster chok1gshd	MODERN SPECIES	83	Vezt (ENSCGRG00001016545)	Fgd6 (ENSCGRG00001022120) #7	Nr2c1 (ENSCGRG00001021503) #8	Ndufa12 (ENSCGRG00001023632) #9	Tmcc3 (ENSCGRG00001011362) #10	Cep83 (ENSCGRG00001017799) #11	Plxnc1 (ENSCGRG00001021705) #12	Cradd (ENSCGRG00001005469) #13	Socs2 (ENSCGRG00001007954) #15	ENSCGRG00001012694 #16	ENSCGRG00001014867 ##17	Nudt4 (ENSCGRG00001016406) #18	Gm17728 (ENSCGRG00001019515)	ENSCGRG00001022131	Eea1 (ENSCGRG00001007706) #21	Btg1 (ENSCGRG00001017332) #22	Dcn (ENSCGRG00001019795) #24	Lum (ENSCGRG00001024041) #25	Kera (ENSCGRG00001024292) #26	Epyc (ENSCGRG00001000236) #27	Ccer1 (ENSCGRG00001007933) #28	Atp2b1 (ENSCGRG00001018626) #29	Poc1b (ENSCGRG00001015662) #30	ENSCGRG00001009510	Dusp6 (ENSCGRG00001011335) #32	Kitl (ENSCGRG00001016450) #34	Tmtc3 (ENSCGRG00001019153) #35	Cep290 (ENSCGRG00001020423) #36	4930430F08Rik (ENSCGRG00001019742) #37	1700017N19Rik (ENSCGRG00001014381)	Mgat4c (ENSCGRG00001006307)
Golden Hamster	MODERN SPECIES	628	Ntn4 (ENSMAUG00000004210)	Usp44 (ENSMAUG00000000679)	ENSMAUG00000014524	Vezt (ENSMAUG00000011049)	Nr2c1 (ENSMAUG00000005656) #8	ENSMAUG00000009984 #9	Tmcc3 (ENSMAUG00000001274) #10	Cep83 (ENSMAUG00000018689) #11	Plxnc1 (ENSMAUG00000021960) #12	Cradd (ENSMAUG00000022216) #13	Socs2 (ENSMAUG00000011777) #15	ENSMAUG00000018130 #16	ENSMAUG00000003983 ##17	ENSMAUG00000008245 #18	Eea1 (ENSMAUG00000008757) #21	Btg1 (ENSMAUG00000020545) #22	Dcn (ENSMAUG00000021986) #24	Lum (ENSMAUG00000014903) #25	Kera (ENSMAUG00000022158) #26	Epyc (ENSMAUG00000017349) #27	Ccer1 (ENSMAUG00000009078) #28	Atp2b1 (ENSMAUG00000009310) #29	Poc1b (ENSMAUG00000021507) #30	Kitl (ENSMAUG00000016386) #34	Tmtc3 (ENSMAUG00000020385) #35	Cep290 (ENSMAUG00000022146) #36	4930430F08Rik (ENSMAUG00000013438) #37	ENSMAUG00000008756	ENSMAUG00000004735	Nts (ENSMAUG00000013146)	Rassf9 (ENSMAUG00000012420)
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00730000111529 #28	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000163607	ENSGT00940000158342.b #32	ENSGT00390000018272 #34	ENSGT00940000157538 #35	ENSGT00730000111039.C #36	ENSGT00500000044938 #37	ENSGT00920000149095.b	ENSGT00940000155352
Mus	ANCESTRAL SPECIES	23	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00860000135975	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00730000111529 #28	ENSGT00900000143579	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000163607	ENSGT00940000158342.b #32	ENSGT00940000155526.b	ENSGT00390000006813.t	ENSGT00390000018272 #34	ENSGT00940000157538 #35	ENSGT00730000111039.C #36
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00860000135975	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491.m #16	ENSGT00540000070023.c.b.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00390000009724.l.i.b.a	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00900000143783	ENSGT00730000111529 #28	ENSGT00900000143579	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000163607	ENSGT00940000158342.b #32	ENSGT00940000155526.b	ENSGT00390000006813.t	ENSGT00390000018272 #34	ENSGT00940000157538 #35
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000003290	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00860000135975	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491.m.b #16	ENSGT00540000070023.c.b.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00390000009724.l.i.b.a.a.a	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00900000143783	ENSGT00730000111529 #28	ENSGT00900000143579	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000163607	ENSGT00940000158342.b #32	ENSGT00940000155526.b	ENSGT00390000006813.t	ENSGT00390000018272 #34	ENSGT00940000157538 #35
Mouse	MODERN SPECIES	1	Vezt (ENSMUSG00000036099)	Fgd6 (ENSMUSG00000020021) #7	Nr2c1 (ENSMUSG00000005897) #8	Ndufa12 (ENSMUSG00000020022) #9	Tmcc3 (ENSMUSG00000020023) #10	Cep83 (ENSMUSG00000020024) #11	Plxnc1 (ENSMUSG00000074785) #12	Cradd (ENSMUSG00000045867) #13	Socs2 (ENSMUSG00000020027) #15	Mrpl42 (ENSMUSG00000062981) #16	Ube2n (ENSMUSG00000074781) #17	Nudt4 (ENSMUSG00000020029) #18	Anapc15-ps (ENSMUSG00000074780)	Eea1 (ENSMUSG00000036499) #21	Gm5426 (ENSMUSG00000096486)	Btg1 (ENSMUSG00000036478) #22	Dcn (ENSMUSG00000019929) #24	Lum (ENSMUSG00000036446) #25	Kera (ENSMUSG00000019932) #26	Epyc (ENSMUSG00000019936) #27	Ccer1 (ENSMUSG00000047025) #28	Atp2b1 (ENSMUSG00000019943) #29	Poc1b (ENSMUSG00000019952) #30	Galnt4 (ENSMUSG00000090035)	Dusp6 (ENSMUSG00000019960) #32	Csl (ENSMUSG00000046934)	Kitl (ENSMUSG00000019966) #34	Gm4301 (ENSMUSG00000094314)	Gm4302 (ENSMUSG00000091101)	Gm4303 (ENSMUSG00000112931)	Gm4305 (ENSMUSG00000112856)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000156334 #7	ENSGT00940000158165 #8	ENSGT00390000005848 #9	ENSGT00860000135975	ENSGT00940000157275 #10	ENSGT00940000154003.A #11	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #12	ENSGT00390000014448 #13	ENSGT00940000157983 #15	ENSGT00390000010491.m.b #16	ENSGT00540000070023.c.a.a ##17	ENSGT00540000070023.c.b.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00390000009724.l.i.b.a.b	ENSGT00950000182952.C.xc.a #22	ENSGT00940000158382 #24	ENSGT00940000158177.b #25	ENSGT00940000158968 #26	ENSGT00940000157574 #27	ENSGT00900000143783	ENSGT00730000111529 #28	ENSGT00900000143579	ENSGT00940000158686 #29	ENSGT00940000160413 #30	ENSGT00940000163607	ENSGT00940000158342.b #32	ENSGT00940000155526.b	ENSGT00390000006813.t	ENSGT00390000018272 #34	ENSGT00940000157538 #35
Steppe mouse	MODERN SPECIES	3422	Tmcc3 (ENSMSIG00000016287) #10	Cep83 (ENSMSIG00000016257) #11	Plxnc1 (ENSMSIG00000016141) #12	Cradd (ENSMSIG00000016116) #13	ENSMSIG00000016093	ENSMSIG00000016056 #15	ENSMSIG00000016042	Mrpl42 (ENSMSIG00000015996) #16	ENSMSIG00000015978 ##17	ENSMSIG00000015960 #18	ENSMSIG00000015942	ENSMSIG00000015896 #20	Eea1 (ENSMSIG00000015697) #21	Gm5426 (ENSMSIG00000015678)	ENSMSIG00000015647	Btg1 (ENSMSIG00000015631) #22	ENSMSIG00000015628	Dcn (ENSMSIG00000015595) #24	Lum (ENSMSIG00000015574) #25	Kera (ENSMSIG00000015562) #26	Epyc (ENSMSIG00000015524) #27	Ccer1 (ENSMSIG00000015509) #28	ENSMSIG00000015503	Atp2b1 (ENSMSIG00000015351) #29	Poc1b (ENSMSIG00000015203) #30	Dusp6 (ENSMSIG00000015196) #32	ENSMSIG00000015181	ENSMSIG00000015162	ENSMSIG00000015150	Csl (ENSMSIG00000015137)	Kitl (ENSMSIG00000015054) #34
Ryukyu mouse	MODERN SPECIES	1	Fgd6 (MGP_CAROLIEiJ_G0015740) #7	Nr2c1 (MGP_CAROLIEiJ_G0015741) #8	Ndufa12 (MGP_CAROLIEiJ_G0015742) #9	MGP_CAROLIEiJ_G0015743	Tmcc3 (MGP_CAROLIEiJ_G0015744) #10	Cep83 (MGP_CAROLIEiJ_G0015745) #11	Plxnc1 (MGP_CAROLIEiJ_G0015746) #12	Cradd (MGP_CAROLIEiJ_G0015747) #13	Socs2 (MGP_CAROLIEiJ_G0015748) #15	MGP_CAROLIEiJ_G0015749	Mrpl42 (MGP_CAROLIEiJ_G0015750) #16	Ube2n (MGP_CAROLIEiJ_G0015751) #17	Nudt4 (MGP_CAROLIEiJ_G0015752) #18	Eea1 (MGP_CAROLIEiJ_G0015753) #21	MGP_CAROLIEiJ_G0015754	Btg1 (MGP_CAROLIEiJ_G0015755) #22	Dcn (MGP_CAROLIEiJ_G0015756) #24	Lum (MGP_CAROLIEiJ_G0015757) #25	Kera (MGP_CAROLIEiJ_G0015758) #26	Epyc (MGP_CAROLIEiJ_G0015759) #27	MGP_CAROLIEiJ_G0015760	Ccer1 (MGP_CAROLIEiJ_G0015761) #28	Atp2b1 (MGP_CAROLIEiJ_G0015762) #29	Poc1b (MGP_CAROLIEiJ_G0015763) #30	Galnt4 (MGP_CAROLIEiJ_G0015764)	Dusp6 (MGP_CAROLIEiJ_G0015765) #32	MGP_CAROLIEiJ_G0015766	Csl (MGP_CAROLIEiJ_G0015767)	Kitl (MGP_CAROLIEiJ_G0015768) #34	Tmtc3 (MGP_CAROLIEiJ_G0015769) #35	Cep290 (MGP_CAROLIEiJ_G0015770) #36
Shrew mouse	MODERN SPECIES	22	Metap2 (MGP_PahariEiJ_G0031347)	Vezt (MGP_PahariEiJ_G0031346)	Fgd6 (MGP_PahariEiJ_G0031345) #7	Nr2c1 (MGP_PahariEiJ_G0031344) #8	Ndufa12 (MGP_PahariEiJ_G0031343) #9	MGP_PahariEiJ_G0031342	Tmcc3 (MGP_PahariEiJ_G0031341) #10	Cep83 (MGP_PahariEiJ_G0031340) #11	Plxnc1 (MGP_PahariEiJ_G0031339) #12	Cradd (MGP_PahariEiJ_G0031338) #13	MGP_PahariEiJ_G0031337 #15	MGP_PahariEiJ_G0031336 #15	Mrpl42 (MGP_PahariEiJ_G0031335) #16	Ube2n (MGP_PahariEiJ_G0031334) #17	Eea1 (MGP_PahariEiJ_G0031333) #21	Btg1 (MGP_PahariEiJ_G0031332) #22	Dcn (MGP_PahariEiJ_G0031331) #24	Lum (MGP_PahariEiJ_G0031330) #25	Kera (MGP_PahariEiJ_G0031329) #26	Epyc (MGP_PahariEiJ_G0031328) #27	Ccer1 (MGP_PahariEiJ_G0031327) #28	MGP_PahariEiJ_G0031326	Atp2b1 (MGP_PahariEiJ_G0031325) #29	Galnt4 (MGP_PahariEiJ_G0031324)	Poc1b (MGP_PahariEiJ_G0031323) #30	Dusp6 (MGP_PahariEiJ_G0031322) #32	MGP_PahariEiJ_G0031321	Csl (MGP_PahariEiJ_G0031320)	Kitl (MGP_PahariEiJ_G0031319) #34	Tmtc3 (MGP_PahariEiJ_G0031318) #35	Cep290 (MGP_PahariEiJ_G0031317) #36
Rat	MODERN SPECIES	17	Fgd6 (ENSRNOG00000054515) #7	Nr2c1 (ENSRNOG00000006983) #8	Ndufa12 (ENSRNOG00000007407) #9	Tmcc3 (ENSRNOG00000007713) #10	LOC100363642 (ENSRNOG00000007859) #11	Plxnc1 (ENSRNOG00000007970) #12	Cradd (ENSRNOG00000008507) #13	LOC103690821 (ENSRNOG00000050393) #14	Socs2 (ENSRNOG00000008965) #15	Mrpl42 (ENSRNOG00000042740) #16	Ube2n (ENSRNOG00000058053) #17	Nudt4 (ENSRNOG00000009094) #18	AABR07056686.1 (ENSRNOG00000021688) #19	ENSRNOG00000063295 #20	Eea1 (ENSRNOG00000021681) #21	Btg1 (ENSRNOG00000004284) #22	ENSRNOG00000068905 #23	Dcn (ENSRNOG00000004554) #24	Lum (ENSRNOG00000004610) #25	Kera (ENSRNOG00000004635) #26	Epyc (ENSRNOG00000004717) #27	Ccer1 (ENSRNOG00000004875) #28	Atp2b1 (ENSRNOG00000004026) #29	Poc1b (ENSRNOG00000024450) #30	ENSRNOG00000069237 #31	Dusp6 (ENSRNOG00000023896) #32	ENSRNOG00000067092 #33	Kitlg (ENSRNOG00000005386) #34	Tmtc3 (ENSRNOG00000006749) #35	Cep290 (ENSRNOG00000056458) #36	RGD1307947 (ENSRNOG00000006973) #37
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT00940000161768.B	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00940000163385	ENSGT00920000149445	ENSGT00940000166354	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT01050000245028.C	ENSGT01050000245028.A	ENSGT00520000058743	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.b.s #14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b	ENSGT00390000002197	ENSGT00940000154400.b.d.b
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000158743	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT00940000161768.B	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00920000149445.a	ENSGT00940000166354.a	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT01050000245028.C	ENSGT01050000245028.A	ENSGT00520000058743	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.a.a.b ##14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b	ENSGT00390000002197	ENSGT00940000154400.b.d.b
Cricetinae	ANCESTRAL SPECIES	29	ENSGT00940000158743	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT00940000161768.B	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00920000149445.a	ENSGT00940000166354.a	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT01050000245028.C	ENSGT01050000245028.A	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.a.a.b ##14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b	ENSGT00390000002197	ENSGT00940000154400.b.d.b	ENSGT00940000160686
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001008147	Gria3 (ENSCGRG00001010277)	ENSCGRG00001000441	6030498E09Rik (ENSCGRG00001016358)	C1galt1c1 (ENSCGRG00001004167)	Mcts1 (ENSCGRG00001022838)	ENSCGRG00001000813	Lamp2 (ENSCGRG00001023305)	Tex13c3 (ENSCGRG00001016863)	Atp1b4 (ENSCGRG00001004737)	Tmem255a (ENSCGRG00001007359)	Zbtb33 (ENSCGRG00001007690)	Rhox12 (ENSCGRG00001000074)	ENSCGRG00001007488	ENSCGRG00001014368	ENSCGRG00001017971 ##22	ENSCGRG00001000411	ENSCGRG00001019766	ENSCGRG00001009719	ENSCGRG00001016724	ENSCGRG00001015897	ENSCGRG00001012665	Rnf113a1 (ENSCGRG00001002251)	NDUFA1 (ENSCGRG00001004710)	Nkap (ENSCGRG00001013137)	ENSCGRG00001006858	ENSCGRG00001021449 ##14	Sowahd (ENSCGRG00001011517)	Septin6 (ENSCGRG00001014207)	Nkrf (ENSCGRG00001001105)	Ube2a (ENSCGRG00001007581)
Golden Hamster	MODERN SPECIES	761					C1galt1c1 (ENSMAUG00000015715)	Mcts1 (ENSMAUG00000000385)	Cul4b (ENSMAUG00000002566)	Lamp2 (ENSMAUG00000016372)	Tex13c3 (ENSMAUG00000001959)	Atp1b4 (ENSMAUG00000016959)	Tmem255a (ENSMAUG00000007801)	Zbtb33 (ENSMAUG00000008177)	Rhox12 (ENSMAUG00000012331)	ENSMAUG00000009678	Rhox10 (ENSMAUG00000017260)	ENSMAUG00000002213 ##22	ENSMAUG00000004552	ENSMAUG00000016012	Ndufa1 (ENSMAUG00000000368)	Akap14 (ENSMAUG00000014839)	Nkap (ENSMAUG00000020220)	Upf3b (ENSMAUG00000008705)	ENSMAUG00000010952	Septin6 (ENSMAUG00000018038)	Nkrf (ENSMAUG00000021303)	Ube2a (ENSMAUG00000009245)	Steep1 (ENSMAUG00000019253)	Slc25a43 (ENSMAUG00000021574)	Akap17b (ENSMAUG00000001593)	Pgrmc1 (ENSMAUG00000009511)	ENSMAUG00000019877
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000158743	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT00940000161768.B	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00920000149445.a	ENSGT00940000154287.a.g.b	ENSGT00940000166354.b	ENSGT00950000182952.C.xc.b ##22
Northern American deer mouse	MODERN SPECIES	475	Thoc2 (ENSPEMG00000007626)	Gria3 (ENSPEMG00000020768)	ENSPEMG00000025713	ENSPEMG00000026463	C1galt1c1 (ENSPEMG00000003943)	Mcts1 (ENSPEMG00000014914)	Cul4b (ENSPEMG00000008902)	ENSPEMG00000030809	Tex13c3 (ENSPEMG00000006117)	Atp1b4 (ENSPEMG00000026754)	Tmem255a (ENSPEMG00000020511)	Zbtb33 (ENSPEMG00000023331)	ENSPEMG00000017846	ENSPEMG00000013786	ENSPEMG00000026490	ENSPEMG00000002101 ##22	ENSPEMG00000025608	ENSPEMG00000017550	ENSPEMG00000029359	ENSPEMG00000027345	Pls3 (ENSPEMG00000000739)	ENSPEMG00000025081	Lrch2 (ENSPEMG00000023427)	ENSPEMG00000029813	ENSPEMG00000027327	ENSPEMG00000029369	Amot (ENSPEMG00000009135)	Lhfpl1 (ENSPEMG00000031060)	ENSPEMG00000026868	ENSPEMG00000026774	Rtl4 (ENSPEMG00000014794)
Murinae	ANCESTRAL SPECIES	72														ENSGT00940000166354	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22
Mus	ANCESTRAL SPECIES	9	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT00940000161768.B	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00940000163385	ENSGT00920000149445	ENSGT00940000166354	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT00730000112198.a.a	ENSGT00700000106005	ENSGT01050000245028.A	ENSGT01050000245028.C	ENSGT00520000058743	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.b.s #14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	23	Gria3 (MGP_PahariEiJ_G0031568)	6030498E09Rik (MGP_PahariEiJ_G0031567)	C1galt1c1 (MGP_PahariEiJ_G0031566)	Mcts1 (MGP_PahariEiJ_G0031565)	MGP_PahariEiJ_G0031564	Lamp2 (MGP_PahariEiJ_G0031563)	MGP_PahariEiJ_G0031562	Atp1b4 (MGP_PahariEiJ_G0031561)	Tmem255a (MGP_PahariEiJ_G0031560)	Zbtb33 (MGP_PahariEiJ_G0031559)	MGP_PahariEiJ_G0031558	Rhox12 (MGP_PahariEiJ_G0031557)	Rhox11 (MGP_PahariEiJ_G0031556)	Rhox10 (MGP_PahariEiJ_G0031555)	MGP_PahariEiJ_G0031554 ##22	MGP_PahariEiJ_G0031553 ##22	MGP_PahariEiJ_G0031552	MGP_PahariEiJ_G0031551	MGP_PahariEiJ_G0031550	MGP_PahariEiJ_G0031549	MGP_PahariEiJ_G0031548	Rnf113a1 (MGP_PahariEiJ_G0031547)	Ndufa1 (MGP_PahariEiJ_G0031546)	MGP_PahariEiJ_G0031545	Nkap (MGP_PahariEiJ_G0031544)	Upf3b (MGP_PahariEiJ_G0031543)	Rpl39 (MGP_PahariEiJ_G0031542) #14	Sowahd (MGP_PahariEiJ_G0031541)	MGP_PahariEiJ_G0031540	Nkrf (MGP_PahariEiJ_G0031539)	MGP_PahariEiJ_G0031538
Shrew mouse	MODERN SPECIES	23	Thoc2 (MGP_PahariEiJ_G0031569)	Gria3 (MGP_PahariEiJ_G0031568)	6030498E09Rik (MGP_PahariEiJ_G0031567)	C1galt1c1 (MGP_PahariEiJ_G0031566)	Mcts1 (MGP_PahariEiJ_G0031565)	MGP_PahariEiJ_G0031564	Lamp2 (MGP_PahariEiJ_G0031563)	MGP_PahariEiJ_G0031562	Atp1b4 (MGP_PahariEiJ_G0031561)	Tmem255a (MGP_PahariEiJ_G0031560)	Zbtb33 (MGP_PahariEiJ_G0031559)	MGP_PahariEiJ_G0031558	Rhox12 (MGP_PahariEiJ_G0031557)	Rhox11 (MGP_PahariEiJ_G0031556)	Rhox10 (MGP_PahariEiJ_G0031555)	MGP_PahariEiJ_G0031554 ##22	MGP_PahariEiJ_G0031553 ##22	MGP_PahariEiJ_G0031552	MGP_PahariEiJ_G0031551	MGP_PahariEiJ_G0031550	MGP_PahariEiJ_G0031549	MGP_PahariEiJ_G0031548	Rnf113a1 (MGP_PahariEiJ_G0031547)	Ndufa1 (MGP_PahariEiJ_G0031546)	MGP_PahariEiJ_G0031545	Nkap (MGP_PahariEiJ_G0031544)	Upf3b (MGP_PahariEiJ_G0031543)	Rpl39 (MGP_PahariEiJ_G0031542) #14	Sowahd (MGP_PahariEiJ_G0031541)	MGP_PahariEiJ_G0031540	Nkrf (MGP_PahariEiJ_G0031539)
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000158743	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00940000163385	ENSGT00920000149445	ENSGT00940000166354	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT01050000245028.A.a.b	ENSGT00520000058743	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.b.s #14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b	ENSGT00390000002197	ENSGT00940000154400.b.d.a.a	ENSGT00940000160686
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000158743	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00940000163385	ENSGT00920000149445	ENSGT00940000166354	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT01050000245028.A.a.b	ENSGT00520000058743	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.b.s #14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b	ENSGT00390000002197	ENSGT00940000154400.b.d.a.a	ENSGT00940000160686
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000158743	ENSGT00710000106792.g	ENSGT00940000156123.b	ENSGT01050000245360	ENSGT00940000155145.e	ENSGT00550000074964.i.a	ENSGT00940000155339	ENSGT00950000182899.B.b	ENSGT01030000234579.B.a	ENSGT00940000160471	ENSGT00940000157481	ENSGT00940000163385	ENSGT00920000149445	ENSGT00940000166354	ENSGT00940000154287.a.h	ENSGT00950000182952.C.xc.b ##22	ENSGT00700000106005	ENSGT01050000245028.A.a.b	ENSGT00520000058743	ENSGT00390000016292.g.a.a	ENSGT00390000007560	ENSGT00390000003444	ENSGT00940000160787	ENSGT00390000017146.a	ENSGT00390000014814.b.s #14	ENSGT00950000183003.a.a.a.b	ENSGT00940000158026	ENSGT00940000157256	ENSGT00940000155075.a.b	ENSGT00390000002197	ENSGT00940000160686
Steppe mouse	MODERN SPECIES	1512																ENSMSIG00000021326 ##22
spretus	MODERN SPECIES	19	Xiap (MGP_SPRETEiJ_G0034182)	Thoc2 (MGP_SPRETEiJ_G0034181)	Gria3 (MGP_SPRETEiJ_G0034180)	6030498E09Rik (MGP_SPRETEiJ_G0034179)	C1galt1c1 (MGP_SPRETEiJ_G0034178)	Mcts1 (MGP_SPRETEiJ_G0034177)	Cul4b (MGP_SPRETEiJ_G0034176)	Lamp2 (MGP_SPRETEiJ_G0034175)	Atp1b4 (MGP_SPRETEiJ_G0034174)	Tmem255a (MGP_SPRETEiJ_G0034173)	Zbtb33 (MGP_SPRETEiJ_G0034172)	Rhox13 (MGP_SPRETEiJ_G0034171)	Rhox12 (MGP_SPRETEiJ_G0034170)	Rhox11 (MGP_SPRETEiJ_G0034169)	MGP_SPRETEiJ_G0034168	MGP_SPRETEiJ_G0034166 ##22	MGP_SPRETEiJ_G0034165	MGP_SPRETEiJ_G0034164	MGP_SPRETEiJ_G0034163	MGP_SPRETEiJ_G0034162	MGP_SPRETEiJ_G0034161	MGP_SPRETEiJ_G0034160	MGP_SPRETEiJ_G0034159	Rhox1 (MGP_SPRETEiJ_G0034158)	Gm9 (MGP_SPRETEiJ_G0034157)	Rnf113a1 (MGP_SPRETEiJ_G0034156)	Ndufa1 (MGP_SPRETEiJ_G0034155)	Akap14 (MGP_SPRETEiJ_G0034154)	Nkap (MGP_SPRETEiJ_G0034153)	Upf3b (MGP_SPRETEiJ_G0034152)	Rpl39 (MGP_SPRETEiJ_G0034151) #14
Ryukyu mouse	MODERN SPECIES	19	Thoc2 (MGP_CAROLIEiJ_G0033023)	Gria3 (MGP_CAROLIEiJ_G0033022)	6030498E09Rik (MGP_CAROLIEiJ_G0033021)	C1galt1c1 (MGP_CAROLIEiJ_G0033020)	Mcts1 (MGP_CAROLIEiJ_G0033019)	Cul4b (MGP_CAROLIEiJ_G0033018)	Lamp2 (MGP_CAROLIEiJ_G0033017)	MGP_CAROLIEiJ_G0033016	MGP_CAROLIEiJ_G0033015	Tmem255a (MGP_CAROLIEiJ_G0033014)	Zbtb33 (MGP_CAROLIEiJ_G0033013)	Rhox13 (MGP_CAROLIEiJ_G0033012)	Rhox12 (MGP_CAROLIEiJ_G0033011)	Rhox11 (MGP_CAROLIEiJ_G0033010)	Rhox10 (MGP_CAROLIEiJ_G0033009)	MGP_CAROLIEiJ_G0033007 ##22	Rhox6 (MGP_CAROLIEiJ_G0033005)	MGP_CAROLIEiJ_G0033004	MGP_CAROLIEiJ_G0033003	Gm9 (MGP_CAROLIEiJ_G0033002)	MGP_CAROLIEiJ_G0033001	Nkap (MGP_CAROLIEiJ_G0033000)	Upf3b (MGP_CAROLIEiJ_G0032999)	MGP_CAROLIEiJ_G0032998 ##14	Sowahd (MGP_CAROLIEiJ_G0032997)	Septin6 (MGP_CAROLIEiJ_G0032996)	Nkrf (MGP_CAROLIEiJ_G0032995)	MGP_CAROLIEiJ_G0032994	Steep1 (MGP_CAROLIEiJ_G0032993)	Slc25a5 (MGP_CAROLIEiJ_G0032992)	Slc25a43 (MGP_CAROLIEiJ_G0032991)
Rat	DUPLICATION
Rat	MODERN SPECIES	46	AABR07038676.1 (ENSRNOG00000028202)	RGD1560124 (ENSRNOG00000063278)	LOC691215 (ENSRNOG00000028189)	C1galt1c1 (ENSRNOG00000069353)	Mcts1 (ENSRNOG00000002563)	Cul4b (ENSRNOG00000002585)	LOC100360128 (ENSRNOG00000068620)	Lamp2 (ENSRNOG00000000164)	Atp1b4 (ENSRNOG00000007059)	Tmem255a (ENSRNOG00000028085)	Zbtb33 (ENSRNOG00000028899)	Rhox13 (ENSRNOG00000028050)	Rhox12 (ENSRNOG00000040033)	Rhox11 (ENSRNOG00000028044)	Rhox10 (ENSRNOG00000040026)	Btg1b (ENSRNOG00000047100) ##22	RGD1566035 (ENSRNOG00000030645)	Btg1c (ENSRNOG00000032390) ##22	ENSRNOG00000065266	LOC691272 (ENSRNOG00000043229)	ENSRNOG00000070384	Rhox9 (ENSRNOG00000050457)	Rhox7 (ENSRNOG00000063283)	Rhox8 (ENSRNOG00000031534)	ENSRNOG00000070486	LOC100364002 (ENSRNOG00000052383)	Rhox5 (ENSRNOG00000046548)	Rhoxf2b (ENSRNOG00000040013)	Rhox3 (ENSRNOG00000053351)	Rhox4g (ENSRNOG00000058333)	RGD1560927 (ENSRNOG00000040008)
Rat	MODERN SPECIES	46	LOC691215 (ENSRNOG00000028189)	C1galt1c1 (ENSRNOG00000069353)	Mcts1 (ENSRNOG00000002563)	Cul4b (ENSRNOG00000002585)	LOC100360128 (ENSRNOG00000068620)	Lamp2 (ENSRNOG00000000164)	Atp1b4 (ENSRNOG00000007059)	Tmem255a (ENSRNOG00000028085)	Zbtb33 (ENSRNOG00000028899)	Rhox13 (ENSRNOG00000028050)	Rhox12 (ENSRNOG00000040033)	Rhox11 (ENSRNOG00000028044)	Rhox10 (ENSRNOG00000040026)	Btg1b (ENSRNOG00000047100) ##22	RGD1566035 (ENSRNOG00000030645)	Btg1c (ENSRNOG00000032390) ##22	ENSRNOG00000065266	LOC691272 (ENSRNOG00000043229)	ENSRNOG00000070384	Rhox9 (ENSRNOG00000050457)	Rhox7 (ENSRNOG00000063283)	Rhox8 (ENSRNOG00000031534)	ENSRNOG00000070486	LOC100364002 (ENSRNOG00000052383)	Rhox5 (ENSRNOG00000046548)	Rhoxf2b (ENSRNOG00000040013)	Rhox3 (ENSRNOG00000053351)	Rhox4g (ENSRNOG00000058333)	RGD1560927 (ENSRNOG00000040008)	Rnf113a1 (ENSRNOG00000066548)	Ndufa1 (ENSRNOG00000071176)