Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00900000143486	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Primates	ANCESTRAL SPECIES	6	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00910000147278	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00910000147278	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00880000138031.j #22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00950000183105.B.a.a.a.b	ENSGT00910000147278	ENSGT00910000147996	ENSGT00940000163320 #18	ENSGT00390000005569.x.a.a.a.b	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00950000183105.B.a.a.a.b	ENSGT00910000147278	ENSGT00910000147996	ENSGT00940000163320 #18	ENSGT00390000005569.x.a.a.a.b	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Human	MODERN SPECIES	3	HAL (ENSG00000084110) #7	LTA4H (ENSG00000111144) #8	ELK3 (ENSG00000111145) #9	CDK17 (ENSG00000059758) #10	CFAP54 (ENSG00000188596) #11	NEDD1 (ENSG00000139350) #12	TMPO (ENSG00000120802) #13	SLC25A3 (ENSG00000075415) #14	IKBIP (ENSG00000166130) #15	APAF1 (ENSG00000120868) #16	ANKS1B (ENSG00000185046) #17	GARIN6 (ENSG00000180219) #18	BLTP3B (ENSG00000111647) #19	ACTR6 (ENSG00000075089) #20	DEPDC4 (ENSG00000166153) #21	SCYL2 (ENSG00000136021) #22	SLC17A8 (ENSG00000179520) #23	NR1H4 (ENSG00000012504) #24	GAS2L3 (ENSG00000139354) #25	ANO4 (ENSG00000151572) #26	SLC5A8 (ENSG00000256870) #27	UTP20 (ENSG00000120800) #28	ARL1 (ENSG00000120805) #29	SPIC (ENSG00000166211) #30	MYBPC1 (ENSG00000196091) #31	CHPT1 (ENSG00000111666) #32	SYCP3 (ENSG00000139351) #33	GNPTAB (ENSG00000111670) #34	DRAM1 (ENSG00000136048) #35	WASHC3 (ENSG00000120860) #36	NUP37 (ENSG00000075188) #37
Pan	ANCESTRAL SPECIES	4	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00950000183105.B.a.a.a.b	ENSGT00910000147278	ENSGT00910000147996	ENSGT00940000163320 #18	ENSGT00390000005569.x.a.a.a.b	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Bonobo	MODERN SPECIES	3	ENSPPAG00000031102 ##13	SLC25A3 (ENSPPAG00000029167) #14	IKBIP (ENSPPAG00000003106) #15	APAF1 (ENSPPAG00000031677) #16	ANKS1B (ENSPPAG00000026584) #17	ENSPPAG00000040891	ENSPPAG00000040779	ENSPPAG00000043599	ENSPPAG00000020393	GARIN6 (ENSPPAG00000031008) #18	ENSPPAG00000042658	BLTP3B (ENSPPAG00000034670) #19	ENSPPAG00000035717	ACTR6 (ENSPPAG00000035162) #20	ENSPPAG00000033600 #21	SCYL2 (ENSPPAG00000032245) #22	SLC17A8 (ENSPPAG00000041738) #23	NR1H4 (ENSPPAG00000027056) #24	GAS2L3 (ENSPPAG00000032303) #25	ENSPPAG00000042869	ANO4 (ENSPPAG00000037910) #26	SLC5A8 (ENSPPAG00000038189) #27	UTP20 (ENSPPAG00000001381) #28	ARL1 (ENSPPAG00000034860) #29	SPIC (ENSPPAG00000029437) #30	MYBPC1 (ENSPPAG00000027978) #31	ENSPPAG00000029593 #32	SYCP3 (ENSPPAG00000031232) #33	GNPTAB (ENSPPAG00000041156) #34	DRAM1 (ENSPPAG00000043812) #35	WASHC3 (ENSPPAG00000040130) #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	3	ENSPTRG00000039568	TMPO (ENSPTRG00000005331) ##13	SLC25A3 (ENSPTRG00000005333) #14	ENSPTRG00000005334 #15	APAF1 (ENSPTRG00000005335) #16	ANKS1B (ENSPTRG00000005336) #17	ENSPTRG00000044995	ENSPTRG00000046979	ENSPTRG00000043655	GARIN6 (ENSPTRG00000005338) #18	ENSPTRG00000047093	BLTP3B (ENSPTRG00000005339) #19	ENSPTRG00000047818	ACTR6 (ENSPTRG00000005341) #20	DEPDC4 (ENSPTRG00000039541) #21	SCYL2 (ENSPTRG00000051978) #22	SLC17A8 (ENSPTRG00000005344) #23	NR1H4 (ENSPTRG00000005345) #24	ENSPTRG00000051429	GAS2L3 (ENSPTRG00000005346) #25	ANO4 (ENSPTRG00000005347) #26	SLC5A8 (ENSPTRG00000005348) #27	UTP20 (ENSPTRG00000005349) #28	ARL1 (ENSPTRG00000005350) #29	SPIC (ENSPTRG00000005351) #30	MYBPC1 (ENSPTRG00000005353) #31	CHPT1 (ENSPTRG00000005354) #32	SYCP3 (ENSPTRG00000005355) #33	GNPTAB (ENSPTRG00000005356) #34	ENSPTRG00000031146	DRAM1 (ENSPTRG00000005357) #35
Chimpanzee	MODERN SPECIES	520																ENSPTRG00000005343 #22
Gorilla	MODERN SPECIES	3	ENSGGOG00000039481	ENSGGOG00000003388 ##13	SLC25A3 (ENSGGOG00000015886) #14	IKBIP (ENSGGOG00000008397) #15	APAF1 (ENSGGOG00000008401) #16	ANKS1B (ENSGGOG00000008413) #17	ENSGGOG00000039927	ENSGGOG00000040544	ENSGGOG00000042686	GARIN6 (ENSGGOG00000028296) #18	ENSGGOG00000040695	BLTP3B (ENSGGOG00000022523) #19	ENSGGOG00000023818	ACTR6 (ENSGGOG00000000854) #20	ENSGGOG00000010270 #21	SCYL2 (ENSGGOG00000002948) #22	SLC17A8 (ENSGGOG00000016824) #23	NR1H4 (ENSGGOG00000008137) #24	GAS2L3 (ENSGGOG00000003196) #25	ENSGGOG00000038498	ANO4 (ENSGGOG00000000193) #26	SLC5A8 (ENSGGOG00000004017) #27	UTP20 (ENSGGOG00000004904) #28	ARL1 (ENSGGOG00000010788) #29	SPIC (ENSGGOG00000024597) #30	MYBPC1 (ENSGGOG00000010147) #31	CHPT1 (ENSGGOG00000007397) #32	SYCP3 (ENSGGOG00000002946) #33	GNPTAB (ENSGGOG00000009796) #34	ENSGGOG00000012314	DRAM1 (ENSGGOG00000003761) #35
Orangutan	MODERN SPECIES	3	LTA4H (ENSPPYG00000004851) #8	ELK3 (ENSPPYG00000004852) #9	CDK17 (ENSPPYG00000004853) #10	CFAP54 (ENSPPYG00000004855) #11	NEDD1 (ENSPPYG00000004856) #12	ENSPPYG00000004857 ##13	SLC25A3 (ENSPPYG00000004858) #14	IKBIP (ENSPPYG00000040489) #15	APAF1 (ENSPPYG00000004860) #16	ANKS1B (ENSPPYG00000004861) #17	ENSPPYG00000004862 #18	BLTP3B (ENSPPYG00000004863) #19	ENSPPYG00000033741	ACTR6 (ENSPPYG00000004864) #20	ENSPPYG00000032292 #21	SCYL2 (ENSPPYG00000004865) #22	SLC17A8 (ENSPPYG00000004866) #23	NR1H4 (ENSPPYG00000004867) #24	ENSPPYG00000040948	GAS2L3 (ENSPPYG00000004868) #25	ANO4 (ENSPPYG00000004869) #26	SLC5A8 (ENSPPYG00000004870) #27	UTP20 (ENSPPYG00000004871) #28	ENSPPYG00000004872 #29	SPIC (ENSPPYG00000004873) #30	MYBPC1 (ENSPPYG00000004874) #31	CHPT1 (ENSPPYG00000004875) #32	SYCP3 (ENSPPYG00000004876) #33	GNPTAB (ENSPPYG00000004877) #34	ENSPPYG00000037004 #35	WASHC3 (ENSPPYG00000004878) #36
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES		ZNF701 (ENSNLEG00000006043)	ENSNLEG00000006045	ZNF611 (ENSNLEG00000006047)	ZNF28 (ENSNLEG00000006051)	ENSNLEG00000035292	ZNF468 (ENSNLEG00000027937)	ZNF320 (ENSNLEG00000006053)	ZNF888 (ENSNLEG00000030045)	ZNF816 (ENSNLEG00000034515)	ENSNLEG00000029357	ENSNLEG00000018769	ZNF160 (ENSNLEG00000032951)	ZNF415 (ENSNLEG00000027833)	ZNF347 (ENSNLEG00000006065)	ENSNLEG00000030103	SCYL2 (ENSNLEG00000006068) #22	SLC17A8 (ENSNLEG00000006078) #23	NR1H4 (ENSNLEG00000006093) #24	GAS2L3 (ENSNLEG00000006116) #25	ENSNLEG00000028974	ANO4 (ENSNLEG00000006128) #26	ENSNLEG00000032249	SLC5A8 (ENSNLEG00000006157) #27	UTP20 (ENSNLEG00000006166) #28	ARL1 (ENSNLEG00000006223) #29	SPIC (ENSNLEG00000006232) #30	MYBPC1 (ENSNLEG00000006235) #31	CHPT1 (ENSNLEG00000006332) #32	SYCP3 (ENSNLEG00000006341) #33	GNPTAB (ENSNLEG00000006356) #34	DRAM1 (ENSNLEG00000006362) #35
Gibbon	MODERN SPECIES	14	ENSNLEG00000029928	ENSNLEG00000007009	BMPR2 (ENSNLEG00000007004)	ENSNLEG00000031345	NOP58 (ENSNLEG00000007000)	SUMO1 (ENSNLEG00000006997)	KIAA2012 (ENSNLEG00000006992)	FZD7 (ENSNLEG00000035997)	CDK15 (ENSNLEG00000006990)	ALS2 (ENSNLEG00000006980)	MPP4 (ENSNLEG00000006977)	TMEM237 (ENSNLEG00000006974)	ENSNLEG00000006972	ENSNLEG00000034127	STRADB (ENSNLEG00000006967)	ENSNLEG00000033546 #22	TRAK2 (ENSNLEG00000006960)	FLACC1 (ENSNLEG00000006956)	CASP8 (ENSNLEG00000032856)	CASP10 (ENSNLEG00000006951)	ENSNLEG00000030686	CFLAR (ENSNLEG00000006947)	NDUFB3 (ENSNLEG00000006946)	HYCC2 (ENSNLEG00000006941)	ORC2 (ENSNLEG00000006938)	NIF3L1 (ENSNLEG00000006935)	PPIL3 (ENSNLEG00000034236)	CLK1 (ENSNLEG00000032526)	BZW1 (ENSNLEG00000006929)	ENSNLEG00000029066	AOX1 (ENSNLEG00000006920)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.c #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35
Vervet Monkey	DUPLICATION
Vervet Monkey	MODERN SPECIES	2	ENSCSAG00000003566	ENSCSAG00000003561 #11	NEDD1 (ENSCSAG00000003548) #12	ENSCSAG00000003543	TMPO (ENSCSAG00000003541) #13	SLC25A3 (ENSCSAG00000003535) #14	IKBIP (ENSCSAG00000003532) #15	APAF1 (ENSCSAG00000003526) #16	ENSCSAG00000003515 #17	ENSCSAG00000003498	ENSCSAG00000003493	ENSCSAG00000003488 #17	GARIN6 (ENSCSAG00000003485) #18	BLTP3B (ENSCSAG00000003481) #19	ACTR6 (ENSCSAG00000003476) #20	ENSCSAG00000003470 #22	ENSCSAG00000003466 #22	SLC17A8 (ENSCSAG00000003460) #23	NR1H4 (ENSCSAG00000003451) #24	GAS2L3 (ENSCSAG00000003446) #25	ANO4 (ENSCSAG00000003436) #26	SLC5A8 (ENSCSAG00000003405) #27	UTP20 (ENSCSAG00000003388) #28	ARL1 (ENSCSAG00000003368) #29	ENSCSAG00000003364 ##30	MYBPC1 (ENSCSAG00000003356) #31	CHPT1 (ENSCSAG00000003350) #32	ENSCSAG00000003341 #33	GNPTAB (ENSCSAG00000003332) #34	DRAM1 (ENSCSAG00000003324) #35	WASHC3 (ENSCSAG00000003320) #36
Vervet Monkey	MODERN SPECIES	2	ENSCSAG00000003561 #11	NEDD1 (ENSCSAG00000003548) #12	ENSCSAG00000003543	TMPO (ENSCSAG00000003541) #13	SLC25A3 (ENSCSAG00000003535) #14	IKBIP (ENSCSAG00000003532) #15	APAF1 (ENSCSAG00000003526) #16	ENSCSAG00000003515 #17	ENSCSAG00000003498	ENSCSAG00000003493	ENSCSAG00000003488 #17	GARIN6 (ENSCSAG00000003485) #18	BLTP3B (ENSCSAG00000003481) #19	ACTR6 (ENSCSAG00000003476) #20	ENSCSAG00000003470 #22	ENSCSAG00000003466 #22	SLC17A8 (ENSCSAG00000003460) #23	NR1H4 (ENSCSAG00000003451) #24	GAS2L3 (ENSCSAG00000003446) #25	ANO4 (ENSCSAG00000003436) #26	SLC5A8 (ENSCSAG00000003405) #27	UTP20 (ENSCSAG00000003388) #28	ARL1 (ENSCSAG00000003368) #29	ENSCSAG00000003364 ##30	MYBPC1 (ENSCSAG00000003356) #31	CHPT1 (ENSCSAG00000003350) #32	ENSCSAG00000003341 #33	GNPTAB (ENSCSAG00000003332) #34	DRAM1 (ENSCSAG00000003324) #35	WASHC3 (ENSCSAG00000003320) #36	NUP37 (ENSCSAG00000003314) #37
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.c #33	ENSGT00390000006747 #34
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.c #33	ENSGT00390000006747 #34
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00390000017580.`b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00910000148587	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00950000183123.g.a.b.b.r.b.b.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.c #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Crab-eating macaque	MODERN SPECIES	2	ENSMFAG00000030299	ENSMFAG00000037885 ##13	ENSMFAG00000055805	SLC25A3 (ENSMFAG00000000145) #14	ENSMFAG00000051788 #15	IKBIP (ENSMFAG00000045834) #15	APAF1 (ENSMFAG00000039197) #16	ANKS1B (ENSMFAG00000032660) #17	ENSMFAG00000062988	ENSMFAG00000049863	GARIN6 (ENSMFAG00000044311) #18	BLTP3B (ENSMFAG00000010028) #19	ENSMFAG00000051648	ACTR6 (ENSMFAG00000040575) #20	ENSMFAG00000053279 #21	SCYL2 (ENSMFAG00000028879) #22	SLC17A8 (ENSMFAG00000002114) #23	NR1H4 (ENSMFAG00000002236) #24	GAS2L3 (ENSMFAG00000003398) #25	ANO4 (ENSMFAG00000036524) #26	ENSMFAG00000031324	SLC5A8 (ENSMFAG00000031305) #27	UTP20 (ENSMFAG00000037766) #28	ARL1 (ENSMFAG00000035725) #29	ENSMFAG00000003748 ##30	MYBPC1 (ENSMFAG00000038552) #31	CHPT1 (ENSMFAG00000045187) #32	SYCP3 (ENSMFAG00000037508) #33	GNPTAB (ENSMFAG00000038457) #34	ENSMFAG00000060846	DRAM1 (ENSMFAG00000042396) #35
Rhesus	MODERN SPECIES	2	NEDD1 (ENSMMUG00000004093) #12	ENSMMUG00000001354	ENSMMUG00000063079	TMPO (ENSMMUG00000023719) ##13	SLC25A3 (ENSMMUG00000023036) #14	IKBIP (ENSMMUG00000051674) #15	APAF1 (ENSMMUG00000022404) #16	ANKS1B (ENSMMUG00000022406) #17	ENSMMUG00000062511	ENSMMUG00000054350	GARIN6 (ENSMMUG00000002178) #18	ENSMMUG00000058638	BLTP3B (ENSMMUG00000023601) #19	ENSMMUG00000063774	ACTR6 (ENSMMUG00000023603) #20	SCYL2 (ENSMMUG00000023600) #22	SLC17A8 (ENSMMUG00000017646) #23	NR1H4 (ENSMMUG00000003571) #24	GAS2L3 (ENSMMUG00000020360) #25	ANO4 (ENSMMUG00000018718) #26	ENSMMUG00000055254	SLC5A8 (ENSMMUG00000015134) #27	UTP20 (ENSMMUG00000012891) #28	ARL1 (ENSMMUG00000031610) #29	ENSMMUG00000061260 ##30	MYBPC1 (ENSMMUG00000020875) #31	CHPT1 (ENSMMUG00000020877) #32	SYCP3 (ENSMMUG00000063989) #33	GNPTAB (ENSMMUG00000012562) #34	DRAM1 (ENSMMUG00000042077) #35	WASHC3 (ENSMMUG00000046478) #36
Pig-tailed macaque	MODERN SPECIES	206				LINGO2 (ENSMNEG00000014874)	C9orf72 (ENSMNEG00000032167)	MOB3B (ENSMNEG00000032479)	EQTN (ENSMNEG00000012016)	TEK (ENSMNEG00000036308)	LRRC19 (ENSMNEG00000030147)	IFT74 (ENSMNEG00000031183)	PLAA (ENSMNEG00000026616)	CAAP1 (ENSMNEG00000038989)	ENSMNEG00000000447	BLTP3B (ENSMNEG00000036255) #19	ACTR6 (ENSMNEG00000045418) #20	SCYL2 (ENSMNEG00000039352) #22	SLC17A8 (ENSMNEG00000034787) #23	NR1H4 (ENSMNEG00000029077) #24	ENSMNEG00000034160	GAS2L3 (ENSMNEG00000043688) #25	ENSMNEG00000038922	ANO4 (ENSMNEG00000035796) #26	SLC5A8 (ENSMNEG00000044791) #27	UTP20 (ENSMNEG00000037418) #28	ENSMNEG00000030959	ENSMNEG00000010988	ARL1 (ENSMNEG00000007067) #29	ENSMNEG00000041759 ##30	MYBPC1 (ENSMNEG00000030777) #31	CHPT1 (ENSMNEG00000021213) #32	ENSMNEG00000041521 #33
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.c #33	ENSGT00390000006747 #34
Cercopithecinae_d	ANCESTRAL SPECIES	5	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.c #33	ENSGT00390000006747 #34
Sooty mangabey	MODERN SPECIES	406	HAL (ENSCATG00000016653) #7	LTA4H (ENSCATG00000043659) #8	ELK3 (ENSCATG00000035761) #9	CDK17 (ENSCATG00000008799) #10	CFAP54 (ENSCATG00000040097) #11	NEDD1 (ENSCATG00000040561) #12	ENSCATG00000035402	ENSCATG00000037155 ##13	SLC25A3 (ENSCATG00000042696) #14	IKBIP (ENSCATG00000039722) #15	APAF1 (ENSCATG00000042930) #16	GARIN6 (ENSCATG00000039282) #18	ANKS1B (ENSCATG00000034542) #17	BLTP3B (ENSCATG00000035719) #19	ACTR6 (ENSCATG00000035115) #20	SCYL2 (ENSCATG00000028764) #22	SLC17A8 (ENSCATG00000043531) #23	NR1H4 (ENSCATG00000042241) #24	ENSCATG00000035203	GAS2L3 (ENSCATG00000040264) #25	ANO4 (ENSCATG00000039666) #26	SLC5A8 (ENSCATG00000021653) #27	UTP20 (ENSCATG00000035636) #28	ENSCATG00000020659	ARL1 (ENSCATG00000040389) #29	ENSCATG00000039921 ##30	MYBPC1 (ENSCATG00000036055) #31	CHPT1 (ENSCATG00000040898) #32	ENSCATG00000041189 #33	GNPTAB (ENSCATG00000041157) #34	DRAM1 (ENSCATG00000034964) #35
Drill	MODERN SPECIES	1084							ENSMLEG00000032476	ENSMLEG00000040746 ##13	SLC25A3 (ENSMLEG00000030898) #14	IKBIP (ENSMLEG00000033117) #15	APAF1 (ENSMLEG00000036093) #16	GARIN6 (ENSMLEG00000041924) #18	ANKS1B (ENSMLEG00000035476) #17	BLTP3B (ENSMLEG00000029606) #19	ACTR6 (ENSMLEG00000044194) #20	SCYL2 (ENSMLEG00000029042) #22	SLC17A8 (ENSMLEG00000039757) #23
Olive baboon	MODERN SPECIES	19	CDK17 (ENSPANG00000023604) #10	ENSPANG00000050074	ENSPANG00000044719	CFAP54 (ENSPANG00000035731) #11	NEDD1 (ENSPANG00000023046) #12	ENSPANG00000019454 ##13	ENSPANG00000018018 #14	IKBIP (ENSPANG00000009791) #15	APAF1 (ENSPANG00000011409) #16	ANKS1B (ENSPANG00000008710) #17	ENSPANG00000047895	GARIN6 (ENSPANG00000041130) #18	ENSPANG00000049329	BLTP3B (ENSPANG00000005928) #19	ACTR6 (ENSPANG00000007907) #20	SCYL2 (ENSPANG00000015389) #22	SLC17A8 (ENSPANG00000004049) #23	NR1H4 (ENSPANG00000023009) #24	GAS2L3 (ENSPANG00000013394) #25	ANO4 (ENSPANG00000017946) #26	ENSPANG00000045224	SLC5A8 (ENSPANG00000006619) #27	ARL1 (ENSPANG00000018816) #29	UTP20 (ENSPANG00000020388) #28	ENSPANG00000018239 ##30	ENSPANG00000045377	MYBPC1 (ENSPANG00000009790) #31	CHPT1 (ENSPANG00000004451) #32	SYCP3 (ENSPANG00000000419) #33	GNPTAB (ENSPANG00000000420) #34	ENSPANG00000049661
Rhinopithecus	ANCESTRAL SPECIES	97													ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.a.a.b.b	ENSGT00720000108833 #20	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.f.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a ##30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Golden snub-nosed monkey	MODERN SPECIES	2437												ENSRROG00000002184 #17	BLTP3B (ENSRROG00000035458) #19	ENSRROG00000033398	ACTR6 (ENSRROG00000042456) #20	SCYL2 (ENSRROG00000045785) #22	SLC17A8 (ENSRROG00000034592) #23	NR1H4 (ENSRROG00000040390) #24	ENSRROG00000033315	GAS2L3 (ENSRROG00000029219) #25
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	863									ENSRBIG00000032382	GARIN6 (ENSRBIG00000033826) #18	ENSRBIG00000039980	ENSRBIG00000035139 #17	BLTP3B (ENSRBIG00000033336) #19	ENSRBIG00000031056	ACTR6 (ENSRBIG00000035135) #20	SCYL2 (ENSRBIG00000029723) #22	SLC17A8 (ENSRBIG00000027160) #23	NR1H4 (ENSRBIG00000033064) #24	ENSRBIG00000039933	GAS2L3 (ENSRBIG00000028898) #25	ANO4 (ENSRBIG00000030209) #26	SLC5A8 (ENSRBIG00000026396) #27	UTP20 (ENSRBIG00000025384) #28	ARL1 (ENSRBIG00000042560) #29	MYBPC1 (ENSRBIG00000005217) #31	CHPT1 (ENSRBIG00000042339) #32	SYCP3 (ENSRBIG00000031659) #33	SH3RF3 (ENSRBIG00000035937)	SEPTIN10 (ENSRBIG00000039970)
Black snub-nosed monkey	MODERN SPECIES	71												ENSRBIG00000010556	STRADB (ENSRBIG00000039112)	ENSRBIG00000034741	TRAK2 (ENSRBIG00000027774)	ENSRBIG00000041242 #22	ENSRBIG00000016044	ENSRBIG00000041736	ENSRBIG00000021678	ENSRBIG00000029069	FLACC1 (ENSRBIG00000033862)	ENSRBIG00000011046	CASP8 (ENSRBIG00000044586)	ENSRBIG00000038761	CASP10 (ENSRBIG00000034022)	CFLAR (ENSRBIG00000028528)	NDUFB3 (ENSRBIG00000022999)	HYCC2 (ENSRBIG00000031079)	ORC2 (ENSRBIG00000033127)	NIF3L1 (ENSRBIG00000024376)	ENSRBIG00000038949
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00390000010308.cb.b	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390	ENSGT00880000138031.j #22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b	ENSGT00940000154107.b
Mas night monkey	MODERN SPECIES	357	FAM117B (ENSANAG00000032237)	ENSANAG00000029164	BMPR2 (ENSANAG00000029511)	ENSANAG00000037788	NOP58 (ENSANAG00000037044)	ENSANAG00000033069	KIAA2012 (ENSANAG00000029179)	FZD7 (ENSANAG00000017245)	CDK15 (ENSANAG00000037266)	ALS2 (ENSANAG00000037290)	MPP4 (ENSANAG00000033861)	TMEM237 (ENSANAG00000019897)	ENSANAG00000024913	STRADB (ENSANAG00000027419)	TRAK2 (ENSANAG00000026933)	ENSANAG00000020277 #22	ENSANAG00000020470	FLACC1 (ENSANAG00000028497)	ENSANAG00000021926	CASP8 (ENSANAG00000028822)	CASP10 (ENSANAG00000018072)	CFLAR (ENSANAG00000024537)	ENSANAG00000022594	ENSANAG00000022986	ORC2 (ENSANAG00000029403)	NIF3L1 (ENSANAG00000026731)
Cebidae	ANCESTRAL SPECIES	11	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00390000010308.cb.b	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390	ENSGT00880000138031.j #22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b	ENSGT00940000154107.b
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00390000010308.cb.b	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390	ENSGT00880000138031.j #22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00390000007552.f.w.b	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b
Bolivian squirrel monkey	MODERN SPECIES	56	ENSSBOG00000016073	BMPR2 (ENSSBOG00000025318)	ENSSBOG00000029881	NOP58 (ENSSBOG00000020494)	ENSSBOG00000030624	KIAA2012 (ENSSBOG00000034494)	FZD7 (ENSSBOG00000013896)	CDK15 (ENSSBOG00000023266)	ALS2 (ENSSBOG00000026070)	MPP4 (ENSSBOG00000032446)	TMEM237 (ENSSBOG00000028677)	C2CD6 (ENSSBOG00000024027)	ENSSBOG00000022018	STRADB (ENSSBOG00000028914)	TRAK2 (ENSSBOG00000027410)	ENSSBOG00000024387 #22	FLACC1 (ENSSBOG00000032227)	CASP8 (ENSSBOG00000027346)	ENSSBOG00000021837	CASP10 (ENSSBOG00000023212)	CFLAR (ENSSBOG00000020876)	NDUFB3 (ENSSBOG00000023814)	HYCC2 (ENSSBOG00000033197)	ENSSBOG00000025751	NIF3L1 (ENSSBOG00000034561)	ENSSBOG00000028593	CLK1 (ENSSBOG00000031614)	BZW1 (ENSSBOG00000020710)	ENSSBOG00000034034	AOX1 (ENSSBOG00000032424)	SGO2 (ENSSBOG00000035222)
Simiiformes	ANCESTRAL SPECIES																	ENSGT00880000138031.i ##22
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708.p #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00910000147278	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.i ##22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000153272.a.b.p.a	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708.p #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.i ##22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00940000153272.a.b.p.a	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708.p #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031.i ##22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00390000018868.A.c.b	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Capuchin	MODERN SPECIES	18	CFAP54 (ENSCCAG00000030981) #11	NEDD1 (ENSCCAG00000021182) #12	ENSCCAG00000037273	ENSCCAG00000021602 ##13	ENSCCAG00000019847	ENSCCAG00000001210	ENSCCAG00000021600 #14	IKBIP (ENSCCAG00000035750) #15	APAF1 (ENSCCAG00000036130) #16	ANKS1B (ENSCCAG00000032069) #17	FAM71C (ENSCCAG00000035595) #18	UHRF1BP1L (ENSCCAG00000037649) #19	ENSCCAG00000037286	ACTR6 (ENSCCAG00000024707) #20	ENSCCAG00000031769 #21	ENSCCAG00000008128 ##22	SLC17A8 (ENSCCAG00000001913) #23	NR1H4 (ENSCCAG00000021055) #24	GAS2L3 (ENSCCAG00000037369) #25	ANO4 (ENSCCAG00000034484) #26	ENSCCAG00000018652	ENSCCAG00000000039	SLC5A8 (ENSCCAG00000019178) #27	UTP20 (ENSCCAG00000031422) #28	ARL1 (ENSCCAG00000025938) #29	SPIC (ENSCCAG00000023632) #30	ENSCCAG00000011395	MYBPC1 (ENSCCAG00000034345) #31	CHPT1 (ENSCCAG00000021551) #32	ENSCCAG00000020303 #33	GNPTAB (ENSCCAG00000030235) #34
Bolivian squirrel monkey	MODERN SPECIES	76	ELK3 (ENSSBOG00000033992) #9	CDK17 (ENSSBOG00000023998) #10	ENSSBOG00000027979	CFAP54 (ENSSBOG00000024712) #11	NEDD1 (ENSSBOG00000032018) #12	ENSSBOG00000022813 ##13	ENSSBOG00000035474 #14	IKBIP (ENSSBOG00000030243) #15	APAF1 (ENSSBOG00000031901) #16	ANKS1B (ENSSBOG00000032447) #17	GARIN6 (ENSSBOG00000024096) #18	BLTP3B (ENSSBOG00000024132) #19	ENSSBOG00000019564	ACTR6 (ENSSBOG00000022083) #20	ENSSBOG00000023923 #21	ENSSBOG00000030821 ##22	SLC17A8 (ENSSBOG00000035794) #23	NR1H4 (ENSSBOG00000021182) #24	GAS2L3 (ENSSBOG00000035385) #25	ANO4 (ENSSBOG00000031410) #26	ENSSBOG00000031381	SLC5A8 (ENSSBOG00000033836) #27	UTP20 (ENSSBOG00000035762) #28	ENSSBOG00000024352 #29	SPIC (ENSSBOG00000031070) #30	ENSSBOG00000025315	MYBPC1 (ENSSBOG00000024613) #31	CHPT1 (ENSSBOG00000023502) #32	SYCP3 (ENSSBOG00000035026) #33	GNPTAB (ENSSBOG00000027264) #34	DRAM1 (ENSSBOG00000036041) #35
Marmoset	MODERN SPECIES	21	ENSCJAG00000076158	CDK17 (ENSCJAG00000002538) #10	CFAP54 (ENSCJAG00000002500) #11	NEDD1 (ENSCJAG00000002430) #12	ENSCJAG00000074115	ENSCJAG00000002421 ##13	ENSCJAG00000002392 #14	IKBIP (ENSCJAG00000002387) #15	APAF1 (ENSCJAG00000002341) #16	ANKS1B (ENSCJAG00000002273) #17	ENSCJAG00000078320	GARIN6 (ENSCJAG00000002335) #18	BLTP3B (ENSCJAG00000002230) #19	ENSCJAG00000082439	ACTR6 (ENSCJAG00000002192) #20	ENSCJAG00000002141 ##22	NR1H4 (ENSCJAG00000002087) #24	ENSCJAG00000070677	GAS2L3 (ENSCJAG00000002065) #25	ANO4 (ENSCJAG00000001995) #26	SLC5A8 (ENSCJAG00000001983) #27	UTP20 (ENSCJAG00000001913) #28	ARL1 (ENSCJAG00000001966) #29	ENSCJAG00000056099	ENSCJAG00000074317	SPIC (ENSCJAG00000001906) #30	ENSCJAG00000078786	ENSCJAG00000072908	MYBPC1 (ENSCJAG00000001676) #31	CHPT1 (ENSCJAG00000001667) #32	ENSCJAG00000001658 #33
Mas night monkey	MODERN SPECIES	844	ENSANAG00000036190	ENSANAG00000030628	CFAP54 (ENSANAG00000033133) #11	NEDD1 (ENSANAG00000023249) #12	ENSANAG00000031573 ##13	ENSANAG00000019441 #14	IKBIP (ENSANAG00000029855) #15	ENSANAG00000028428	APAF1 (ENSANAG00000025094) #16	ENSANAG00000026705	GARIN6 (ENSANAG00000031553) #18	ANKS1B (ENSANAG00000020547) #17	BLTP3B (ENSANAG00000021484) #19	ACTR6 (ENSANAG00000027199) #20	DEPDC4 (ENSANAG00000036231) #21	ENSANAG00000028938 ##22	SLC17A8 (ENSANAG00000030963) #23	NR1H4 (ENSANAG00000030336) #24	GAS2L3 (ENSANAG00000025902) #25	ENSANAG00000025598	ENSANAG00000026695	ANO4 (ENSANAG00000033189) #26	SLC5A8 (ENSANAG00000033997) #27	UTP20 (ENSANAG00000027152) #28	ARL1 (ENSANAG00000023491) #29	SPIC (ENSANAG00000024577) #30	ENSANAG00000024431	MYBPC1 (ENSANAG00000025760) #31	CHPT1 (ENSANAG00000023069) #32	SYCP3 (ENSANAG00000023138) #33	GNPTAB (ENSANAG00000024914) #34
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00880000138031.j #22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Hominidae	ANCESTRAL SPECIES	17	ENSGT00930000150950.b.m.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00610000087446	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b
Pan	ANCESTRAL SPECIES	12	ENSGT00390000015889.j	ENSGT00610000087446	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.a	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b
Bonobo	MODERN SPECIES	15	FAM117B (ENSPPAG00000041596)	BMPR2 (ENSPPAG00000017269)	ENSPPAG00000043823	NOP58 (ENSPPAG00000036626)	ENSPPAG00000039520	ENSPPAG00000039551	ENSPPAG00000036444	KIAA2012 (ENSPPAG00000038457)	FZD7 (ENSPPAG00000030490)	CDK15 (ENSPPAG00000027737)	ALS2 (ENSPPAG00000039038)	MPP4 (ENSPPAG00000035730)	TMEM237 (ENSPPAG00000030371)	ENSPPAG00000042646	STRADB (ENSPPAG00000030005)	ENSPPAG00000032863 ##22	TRAK2 (ENSPPAG00000035936)	FLACC1 (ENSPPAG00000012440)	CASP8 (ENSPPAG00000030711)	CASP10 (ENSPPAG00000042370)	CFLAR (ENSPPAG00000027058)	NDUFB3 (ENSPPAG00000040881)	HYCC2 (ENSPPAG00000040686)	ORC2 (ENSPPAG00000030211)	NIF3L1 (ENSPPAG00000043491)	PPIL3 (ENSPPAG00000039183)	CLK1 (ENSPPAG00000036957)	BZW1 (ENSPPAG00000027971)	ENSPPAG00000030893	AOX1 (ENSPPAG00000000241)	SGO2 (ENSPPAG00000000061)
Chimpanzee	MODERN SPECIES	15	FAM117B (ENSPTRG00000012821)	BMPR2 (ENSPTRG00000029076)	ENSPTRG00000047517	NOP58 (ENSPTRG00000012818)	ENSPTRG00000012817	ENSPTRG00000049039	ENSPTRG00000050371	KIAA2012 (ENSPTRG00000012814)	FZD7 (ENSPTRG00000049803)	CDK15 (ENSPTRG00000012812)	ALS2 (ENSPTRG00000012811)	MPP4 (ENSPTRG00000012809)	TMEM237 (ENSPTRG00000012808)	C2CD6 (ENSPTRG00000012807)	STRADB (ENSPTRG00000050289)	ENSPTRG00000051730 ##22	TRAK2 (ENSPTRG00000012804)	FLACC1 (ENSPTRG00000012803)	CASP8 (ENSPTRG00000012801)	CASP10 (ENSPTRG00000012800)	CFLAR (ENSPTRG00000012798)	NDUFB3 (ENSPTRG00000012797)	ENSPTRG00000032634	HYCC2 (ENSPTRG00000012796)	ORC2 (ENSPTRG00000012795)	NIF3L1 (ENSPTRG00000012794)	PPIL3 (ENSPTRG00000012793)	CLK1 (ENSPTRG00000012792)	BZW1 (ENSPTRG00000012791)	ENSPTRG00000044647	AOX1 (ENSPTRG00000012790)
Gorilla	MODERN SPECIES	15	BMPR2 (ENSGGOG00000010989)	ENSGGOG00000042085	ENSGGOG00000014545	ENSGGOG00000026439	ENSGGOG00000007480	ENSGGOG00000027043	ENSGGOG00000025256	KIAA2012 (ENSGGOG00000010791)	FZD7 (ENSGGOG00000040323)	CDK15 (ENSGGOG00000028577)	ALS2 (ENSGGOG00000015032)	MPP4 (ENSGGOG00000015025)	TMEM237 (ENSGGOG00000004720)	C2CD6 (ENSGGOG00000012199)	STRADB (ENSGGOG00000012183)	ENSGGOG00000040945 ##22	TRAK2 (ENSGGOG00000003014)	FLACC1 (ENSGGOG00000000211)	CASP8 (ENSGGOG00000000209)	CASP10 (ENSGGOG00000012288)	ENSGGOG00000042670	CFLAR (ENSGGOG00000010972)	NDUFB3 (ENSGGOG00000023537)	ENSGGOG00000022797	HYCC2 (ENSGGOG00000039554)	ORC2 (ENSGGOG00000014070)	NIF3L1 (ENSGGOG00000014060)	PPIL3 (ENSGGOG00000022268)	CLK1 (ENSGGOG00000016192)	BZW1 (ENSGGOG00000016296)	AOX1 (ENSGGOG00000006140)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00950000183314	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00910000148331	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b
Rhinopithecus	ANCESTRAL SPECIES	83										ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00940000158202	ENSGT00910000147335	ENSGT00390000002219.e	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000163579	ENSGT00940000159722	ENSGT00390000012561.b
Golden snub-nosed monkey	MODERN SPECIES	2976										CDK15 (ENSRROG00000033373)	ALS2 (ENSRROG00000042989)	MPP4 (ENSRROG00000020037)	TMEM237 (ENSRROG00000043593)	C2CD6 (ENSRROG00000043775)	STRADB (ENSRROG00000034956)	ENSRROG00000040838 ##22	TRAK2 (ENSRROG00000039077)
Tarsier	MODERN SPECIES	5602													BLTP3B (ENSTSYG00000006935) #19	ACTR6 (ENSTSYG00000009834) #20	ENSTSYG00000012935 #21	SCYL2 (ENSTSYG00000013692) #22	SLC17A8 (ENSTSYG00000001910) #23	NR1H4 (ENSTSYG00000002997) #24	GAS2L3 (ENSTSYG00000011057) #25	ENSTSYG00000030797	ENSTSYG00000030168	ANO4 (ENSTSYG00000012244) #26	SLC5A8 (ENSTSYG00000011242) #27	UTP20 (ENSTSYG00000003040) #28
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	29	LTA4H (ENSMICG00000012198) #8	ELK3 (ENSMICG00000012211) #9	CDK17 (ENSMICG00000005540) #10	CFAP54 (ENSMICG00000015286) #11	NEDD1 (ENSMICG00000015320) #12	ENSMICG00000031893 ##13	SLC25A3 (ENSMICG00000045036) #14	IKBIP (ENSMICG00000026540) #15	ENSMICG00000003528 #16	ENSMICG00000032726	GARIN6 (ENSMICG00000030013) #18	ANKS1B (ENSMICG00000003540) #17	BLTP3B (ENSMICG00000010210) #19	ENSMICG00000016393 #20	DEPDC4 (ENSMICG00000016407) #21	ENSMICG00000016414 #22	SLC17A8 (ENSMICG00000001586) #23	NR1H4 (ENSMICG00000013522) #24	GAS2L3 (ENSMICG00000042318) #25	ENSMICG00000030149	ENSMICG00000047865 #26	SLC5A8 (ENSMICG00000029503) #27	UTP20 (ENSMICG00000015736) #28	ARL1 (ENSMICG00000015801) #29	SPIC (ENSMICG00000044168) #30	MYBPC1 (ENSMICG00000012018) #31	CHPT1 (ENSMICG00000012038) #32	SYCP3 (ENSMICG00000046057) #33	GNPTAB (ENSMICG00000012048) #34	DRAM1 (ENSMICG00000012068) #35	WASHC3 (ENSMICG00000002612) #36
Mouse lemur	MODERN SPECIES	20														CENPE (ENSMICG00000005101)	TACR3 (ENSMICG00000046253)	ENSMICG00000042331 #22	CXXC4 (ENSMICG00000045183)	TET2 (ENSMICG00000035595)	ENSMICG00000013570	ENSMICG00000047313	ENSMICG00000010754	INTS12 (ENSMICG00000010760)	GSTCD (ENSMICG00000030887)	NPNT (ENSMICG00000010776)	TBCK (ENSMICG00000010786)	AIMP1 (ENSMICG00000010202)	GIMD1 (ENSMICG00000045116)	DKK2 (ENSMICG00000027157)	ENSMICG00000017692	PAPSS1 (ENSMICG00000016262)	SGMS2 (ENSMICG00000008740)
Lemuriformes_a	ANCESTRAL SPECIES	47	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Coquerels sifaka	MODERN SPECIES	968	LTA4H (ENSPCOG00000016371) #8	ELK3 (ENSPCOG00000003335) #9	CDK17 (ENSPCOG00000014977) #10	CFAP54 (ENSPCOG00000024189) #11	NEDD1 (ENSPCOG00000022969) #12	ENSPCOG00000027549 ##13	SLC25A3 (ENSPCOG00000014902) #14	IKBIP (ENSPCOG00000027241) #15	APAF1 (ENSPCOG00000020485) #16	GARIN6 (ENSPCOG00000022737) #18	ANKS1B (ENSPCOG00000020608) #17	BLTP3B (ENSPCOG00000018808) #19	ENSPCOG00000002696 #20	ENSPCOG00000002628 #20	DEPDC4 (ENSPCOG00000000868) #21	SCYL2 (ENSPCOG00000020693) #22	SLC17A8 (ENSPCOG00000016839) #23	NR1H4 (ENSPCOG00000018446) #24	ANO4 (ENSPCOG00000026667) #26	SLC5A8 (ENSPCOG00000016441) #27
Greater bamboo lemur	MODERN SPECIES	735							ENSPSMG00000016116 ##13	SLC25A3 (ENSPSMG00000016005) #14	IKBIP (ENSPSMG00000015923) #15	APAF1 (ENSPSMG00000015780) #16	GARIN6 (ENSPSMG00000015346) #18	ANKS1B (ENSPSMG00000014986) #17	BLTP3B (ENSPSMG00000014572) #19	ACTR6 (ENSPSMG00000014479) #20	DEPDC4 (ENSPSMG00000014424) #21	SCYL2 (ENSPSMG00000014364) #22	SLC17A8 (ENSPSMG00000014214) #23	NR1H4 (ENSPSMG00000014187) #24	GAS2L3 (ENSPSMG00000014137) #25	ANO4 (ENSPSMG00000014062) #26	SLC5A8 (ENSPSMG00000013925) #27	UTP20 (ENSPSMG00000013883) #28	ARL1 (ENSPSMG00000013774) #29	SPIC (ENSPSMG00000013707) #30	MYBPC1 (ENSPSMG00000013038) #31	CHPT1 (ENSPSMG00000012658) #32	SYCP3 (ENSPSMG00000012646) #33	GNPTAB (ENSPSMG00000012631) #34	DRAM1 (ENSPSMG00000012608) #35	WASHC3 (ENSPSMG00000012602) #36	NUP37 (ENSPSMG00000012590) #37
Bushbaby	MODERN SPECIES	122	ENSOGAG00000024990	ENSOGAG00000005823 #11	NEDD1 (ENSOGAG00000005824) #12	ENSOGAG00000012220 ##13	SLC25A3 (ENSOGAG00000012222) #14	ENSOGAG00000028619 #15	IKBIP (ENSOGAG00000012226) #15	APAF1 (ENSOGAG00000012229) #16	ENSOGAG00000025146 #17	GARIN6 (ENSOGAG00000006412) #18	ANKS1B (ENSOGAG00000012239) #17	BLTP3B (ENSOGAG00000001738) #19	ACTR6 (ENSOGAG00000001741) #20	ENSOGAG00000026542	DEPDC4 (ENSOGAG00000026205) #21	SCYL2 (ENSOGAG00000007862) #22	SLC17A8 (ENSOGAG00000007870) #23	NR1H4 (ENSOGAG00000007874) #24	GAS2L3 (ENSOGAG00000003680) #25	ANO4 (ENSOGAG00000015111) #26	SLC5A8 (ENSOGAG00000015120) #27	ENSOGAG00000026488	UTP20 (ENSOGAG00000015130) #28	ARL1 (ENSOGAG00000015144) #29	SPIC (ENSOGAG00000015148) #30	MYBPC1 (ENSOGAG00000001204) #31	CHPT1 (ENSOGAG00000001207) #32	SYCP3 (ENSOGAG00000024543) #33	GNPTAB (ENSOGAG00000012576) #34	DRAM1 (ENSOGAG00000003318) #35	WASHC3 (ENSOGAG00000003322) #36
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00900000143486	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Glires	ANCESTRAL SPECIES	4	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00900000143486	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Muroidea	ANCESTRAL SPECIES	5	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	10	Ccdc38 (ENSMOCG00000000418)	Amdhd1 (ENSMOCG00000013736)	Hal (ENSMOCG00000020920) #7	Lta4h (ENSMOCG00000007811) #8	Elk3 (ENSMOCG00000012020) #9	Cdk17 (ENSMOCG00000014292) #10	Cfap54 (ENSMOCG00000015195) #11	Nedd1 (ENSMOCG00000016729) #12	Tmpo (ENSMOCG00000003846) ##13	Slc25a3 (ENSMOCG00000011110) #14	Ikbip (ENSMOCG00000003674) #15	Apaf1 (ENSMOCG00000015964) #16	Anks1b (ENSMOCG00000008363) #17	Uhrf1bp1l (ENSMOCG00000003118) #19	Actr6 (ENSMOCG00000020691) #20	ENSMOCG00000016884 #22	Slc17a8 (ENSMOCG00000009428) #23	Nr1h4 (ENSMOCG00000006519) #24	Gas2l3 (ENSMOCG00000010014) #25	Ano4 (ENSMOCG00000015645) #26	Slc5a8 (ENSMOCG00000012457) #27	Utp20 (ENSMOCG00000015242) #28	Arl1 (ENSMOCG00000005852) #29	ENSMOCG00000009467	Spic (ENSMOCG00000015321) #30	Mybpc1 (ENSMOCG00000022013) #31	Chpt1 (ENSMOCG00000014213) #32	Sycp3 (ENSMOCG00000018486) #33	ENSMOCG00000016954 #34	Dram1 (ENSMOCG00000021435) #35	Washc3 (ENSMOCG00000018398) #36
Prairie vole	MODERN SPECIES	352	Il18rap (ENSMOCG00000000247)	Il18r1 (ENSMOCG00000018379)	Il1rl1 (ENSMOCG00000013141)	Il1rl2 (ENSMOCG00000021017)	Il1r1 (ENSMOCG00000012872)	Il1r2 (ENSMOCG00000014917)	Map4k4 (ENSMOCG00000003196)	Rfx8 (ENSMOCG00000020079)	Creg2 (ENSMOCG00000005255)	ENSMOCG00000004327	ENSMOCG00000022614	Cnot11 (ENSMOCG00000020059)	Tbc1d8 (ENSMOCG00000020892)	Rpl31 (ENSMOCG00000012618)	ENSMOCG00000003508	ENSMOCG00000015837 #22	ENSMOCG00000007220	Nms (ENSMOCG00000008968)	Chst10 (ENSMOCG00000016355)	Lonrf2 (ENSMOCG00000017896)	ENSMOCG00000005572	ENSMOCG00000005082	ENSMOCG00000017401	ENSMOCG00000015713	Txndc9 (ENSMOCG00000009394)	Lyg1 (ENSMOCG00000013025)	Lyg2 (ENSMOCG00000022777)	Mrpl30 (ENSMOCG00000005615)	Mitd1 (ENSMOCG00000014690)	Lipt1 (ENSMOCG00000013610)	Tsga10 (ENSMOCG00000010193)
Northern American deer mouse	MODERN SPECIES	9	Ccdc38 (ENSPEMG00000021888)	Amdhd1 (ENSPEMG00000022642)	Hal (ENSPEMG00000022890) #7	Lta4h (ENSPEMG00000024211) #8	Elk3 (ENSPEMG00000015910) #9	Cdk17 (ENSPEMG00000013082) #10	Cfap54 (ENSPEMG00000022516) #11	Nedd1 (ENSPEMG00000022166) #12	Tmpo (ENSPEMG00000013139) ##13	Slc25a3 (ENSPEMG00000007546) #14	Ikbip (ENSPEMG00000003189) #15	Apaf1 (ENSPEMG00000013242) #16	Anks1b (ENSPEMG00000021142) #17	Uhrf1bp1l (ENSPEMG00000021207) #19	Actr6 (ENSPEMG00000007827) #20	Scyl2 (ENSPEMG00000015522) #22	ENSPEMG00000025459	Slc17a8 (ENSPEMG00000013525) #23	Nr1h4 (ENSPEMG00000021973) #24	Gas2l3 (ENSPEMG00000023391) #25	Ano4 (ENSPEMG00000009170) #26	Slc5a8 (ENSPEMG00000020559) #27	Utp20 (ENSPEMG00000024120) #28	Arl1 (ENSPEMG00000008781) #29	Spic (ENSPEMG00000020720) #30	Mybpc1 (ENSPEMG00000021020) #31	ENSPEMG00000012990 #32	Sycp3 (ENSPEMG00000021453) #33	Gnptab (ENSPEMG00000020834) #34	Dram1 (ENSPEMG00000021639) #35	Washc3 (ENSPEMG00000022296) #36
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	83	Lta4h (ENSCGRG00001010777) #8	Elk3 (ENSCGRG00001021882) #9	Cdk17 (ENSCGRG00001016887) #10	ENSCGRG00001019085	ENSCGRG00001014718	Nedd1 (ENSCGRG00001019132) #12	Tmpo (ENSCGRG00001018759) ##13	Slc25a3 (ENSCGRG00001015631) #14	Ikbip (ENSCGRG00001015426) #15	Apaf1 (ENSCGRG00001019923) #16	ENSCGRG00001010325 #17	ENSCGRG00001012704 #17	ENSCGRG00001007098	Uhrf1bp1l (ENSCGRG00001015837) #19	Actr6 (ENSCGRG00001019259) #20	ENSCGRG00001005091 #22	Slc17a8 (ENSCGRG00001021681) #23	Nr1h4 (ENSCGRG00001017990) #24	Gas2l3 (ENSCGRG00001015751) #25	Ano4 (ENSCGRG00001022718) #26	Slc5a8 (ENSCGRG00001014482) #27	Utp20 (ENSCGRG00001017151) #28	Arl1 (ENSCGRG00001010446) #29	ENSCGRG00001008037	Spic (ENSCGRG00001005919) #30	Mybpc1 (ENSCGRG00001023486) #31	Chpt1 (ENSCGRG00001011169) #32	Sycp3 (ENSCGRG00001006406) #33	Gnptab (ENSCGRG00001022192) #34	Dram1 (ENSCGRG00001017541) #35	Washc3 (ENSCGRG00001018411) #36
Chinese hamster chok1gshd	MODERN SPECIES	83	ENSCGRG00001014628	Glipr1 (ENSCGRG00001017559)	Krr1 (ENSCGRG00001005995)	ENSCGRG00001005440	Phlda1 (ENSCGRG00001012896)	ENSCGRG00001019257	Bbs10 (ENSCGRG00001010466)	Osbpl8 (ENSCGRG00001021286)	Zdhhc17 (ENSCGRG00001007660)	Csrp2 (ENSCGRG00001000844)	E2f7 (ENSCGRG00001006568)	ENSCGRG00001011762	Nav3 (ENSCGRG00001022037)	Brcc3dc (ENSCGRG00001009076)	Syt1 (ENSCGRG00001000069)	ENSCGRG00001010398 #22	ENSCGRG00001009057	Pawr (ENSCGRG00001011044)	Ppp1r12a (ENSCGRG00001017263)	Otogl (ENSCGRG00001018530)	Ptprq (ENSCGRG00001017128)	Myf6 (ENSCGRG00001006341)	Myf5 (ENSCGRG00001009370)	Lin7a (ENSCGRG00001003313)	Acss3 (ENSCGRG00001009906)	Ppfia2 (ENSCGRG00001020914)	ENSCGRG00001016413	Syn3 (ENSCGRG00001000589)	Timp3 (ENSCGRG00001016875)	Fbxo7 (ENSCGRG00001019488)	Bpifc (ENSCGRG00001023438)
Golden Hamster	MODERN SPECIES	628	ENSMAUG00000008765	Elk3 (ENSMAUG00000009662) #9	Cdk17 (ENSMAUG00000017263) #10	ENSMAUG00000018845	ENSMAUG00000021431	Nedd1 (ENSMAUG00000013081) #12	ENSMAUG00000015762	Tmpo (ENSMAUG00000014527) ##13	Slc25a3 (ENSMAUG00000017601) #14	ENSMAUG00000022277 #15	ENSMAUG00000007841 #16	Anks1b (ENSMAUG00000010615) #17	Uhrf1bp1l (ENSMAUG00000013302) #19	ENSMAUG00000014661 #20	ENSMAUG00000010233 #20	Scyl2 (ENSMAUG00000013849) #22	Slc17a8 (ENSMAUG00000007901) #23	Nr1h4 (ENSMAUG00000011325) #24	Gas2l3 (ENSMAUG00000015984) #25	Ano4 (ENSMAUG00000021383) #26	Slc5a8 (ENSMAUG00000020619) #27	Utp20 (ENSMAUG00000011898) #28	Arl1 (ENSMAUG00000021923) #29	ENSMAUG00000008388	Mybpc1 (ENSMAUG00000008414) #31	Chpt1 (ENSMAUG00000012720) #32	Sycp3 (ENSMAUG00000012167) #33	Gnptab (ENSMAUG00000017361) #34	Dram1 (ENSMAUG00000022048) #35	Washc3 (ENSMAUG00000011959) #36	Nup37 (ENSMAUG00000011627) #37
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36
Mus	ANCESTRAL SPECIES	23	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
spretus	MODERN SPECIES	1	Ccdc38 (MGP_SPRETEiJ_G0016552)	Amdhd1 (MGP_SPRETEiJ_G0016551)	Hal (MGP_SPRETEiJ_G0016550) #7	Lta4h (MGP_SPRETEiJ_G0016549) #8	Elk3 (MGP_SPRETEiJ_G0016548) #9	Cdk17 (MGP_SPRETEiJ_G0016547) #10	Cfap54 (MGP_SPRETEiJ_G0016546) #11	Nedd1 (MGP_SPRETEiJ_G0016545) #12	Tmpo (MGP_SPRETEiJ_G0016544) ##13	Slc25a3 (MGP_SPRETEiJ_G0016543) #14	Ikbip (MGP_SPRETEiJ_G0016542) #15	Apaf1 (MGP_SPRETEiJ_G0016541) #16	Anks1b (MGP_SPRETEiJ_G0016540) #17	Uhrf1bp1l (MGP_SPRETEiJ_G0016539) #19	Actr6 (MGP_SPRETEiJ_G0016538) #20	Scyl2 (MGP_SPRETEiJ_G0016537) #22	Slc17a8 (MGP_SPRETEiJ_G0016536) #23	Nr1h4 (MGP_SPRETEiJ_G0016535) #24	Gas2l3 (MGP_SPRETEiJ_G0016534) #25	Ano4 (MGP_SPRETEiJ_G0016533) #26	Slc5a8 (MGP_SPRETEiJ_G0016532) #27	Utp20 (MGP_SPRETEiJ_G0016531) #28	Arl1 (MGP_SPRETEiJ_G0016530) #29	Spic (MGP_SPRETEiJ_G0016529) #30	Mybpc1 (MGP_SPRETEiJ_G0016528) #31	MGP_SPRETEiJ_G0016527 #32	Sycp3 (MGP_SPRETEiJ_G0016526) #33	Gnptab (MGP_SPRETEiJ_G0016525) #34	Dram1 (MGP_SPRETEiJ_G0016524) #35	Washc3 (MGP_SPRETEiJ_G0016523) #36	Nup37 (MGP_SPRETEiJ_G0016522) #37
Steppe mouse	MODERN SPECIES	2939														Uhrf1bp1l (ENSMSIG00000017125) #19	Actr6 (ENSMSIG00000017172) #20	Scyl2 (ENSMSIG00000017210) #22	Slc17a8 (ENSMSIG00000017267) #23	Nr1h4 (ENSMSIG00000017294) #24	Gas2l3 (ENSMSIG00000017395) #25	Ano4 (ENSMSIG00000017553) #26	Slc5a8 (ENSMSIG00000017818) #27	ENSMSIG00000017854	Utp20 (ENSMSIG00000017862) #28	ENSMSIG00000017985	ENSMSIG00000017992	Spic (ENSMSIG00000018013) #30	Mybpc1 (ENSMSIG00000018042) #31
Mouse	MODERN SPECIES	1	Ccdc38 (ENSMUSG00000036168)	Amdhd1 (ENSMUSG00000015890)	Hal (ENSMUSG00000020017) #7	Lta4h (ENSMUSG00000015889) #8	Elk3 (ENSMUSG00000008398) #9	Cdk17 (ENSMUSG00000020015) #10	Cfap54 (ENSMUSG00000020014) #11	Nedd1 (ENSMUSG00000019988) #12	Tmpo (ENSMUSG00000019961) ##13	Slc25a3 (ENSMUSG00000061904) #14	Ikbip (ENSMUSG00000019975) #15	Apaf1 (ENSMUSG00000019979) #16	Anks1b (ENSMUSG00000058589) #17	Uhrf1bp1l (ENSMUSG00000019951) #19	Actr6 (ENSMUSG00000019948) #20	Scyl2 (ENSMUSG00000069539) #22	Slc17a8 (ENSMUSG00000019935) #23	Nr1h4 (ENSMUSG00000047638) #24	Gas2l3 (ENSMUSG00000074802) #25	Ano4 (ENSMUSG00000035189) #26	Slc5a8 (ENSMUSG00000020062) #27	Utp20 (ENSMUSG00000004356) #28	Arl1 (ENSMUSG00000060904) #29	Spic (ENSMUSG00000004359) #30	Mybpc1 (ENSMUSG00000020061) #31	Sycp3 (ENSMUSG00000020059) #33	Chpt1 (ENSMUSG00000060002) #32	Gnptab (ENSMUSG00000035311) #34	Dram1 (ENSMUSG00000020057) #35	Washc3 (ENSMUSG00000020056) #36	Nup37 (ENSMUSG00000035351) #37
Ryukyu mouse	MODERN SPECIES	1	Ccdc38 (MGP_CAROLIEiJ_G0015734)	Amdhd1 (MGP_CAROLIEiJ_G0015733)	Hal (MGP_CAROLIEiJ_G0015732) #7	Lta4h (MGP_CAROLIEiJ_G0015731) #8	Elk3 (MGP_CAROLIEiJ_G0015730) #9	Cdk17 (MGP_CAROLIEiJ_G0015729) #10	Cfap54 (MGP_CAROLIEiJ_G0015728) #11	Nedd1 (MGP_CAROLIEiJ_G0015727) #12	MGP_CAROLIEiJ_G0015726 #13	Slc25a3 (MGP_CAROLIEiJ_G0015725) #14	Ikbip (MGP_CAROLIEiJ_G0015724) #15	Apaf1 (MGP_CAROLIEiJ_G0015723) #16	Anks1b (MGP_CAROLIEiJ_G0015722) #17	Uhrf1bp1l (MGP_CAROLIEiJ_G0015721) #19	Actr6 (MGP_CAROLIEiJ_G0015720) #20	Scyl2 (MGP_CAROLIEiJ_G0015719) #22	Slc17a8 (MGP_CAROLIEiJ_G0015718) #23	Nr1h4 (MGP_CAROLIEiJ_G0015717) #24	Gas2l3 (MGP_CAROLIEiJ_G0015716) #25	Ano4 (MGP_CAROLIEiJ_G0015715) #26	Slc5a8 (MGP_CAROLIEiJ_G0015714) #27	Utp20 (MGP_CAROLIEiJ_G0015713) #28	Arl1 (MGP_CAROLIEiJ_G0015712) #29	MGP_CAROLIEiJ_G0015711 #30	Mybpc1 (MGP_CAROLIEiJ_G0015710) #31	Sycp3 (MGP_CAROLIEiJ_G0015709) #33	Chpt1 (MGP_CAROLIEiJ_G0015708) #32	Gnptab (MGP_CAROLIEiJ_G0015707) #34	Dram1 (MGP_CAROLIEiJ_G0015706) #35	Washc3 (MGP_CAROLIEiJ_G0015705) #36	Nup37 (MGP_CAROLIEiJ_G0015704) #37
Shrew mouse	MODERN SPECIES	22	Ccdc38 (MGP_PahariEiJ_G0031351)	MGP_PahariEiJ_G0031352	Hal (MGP_PahariEiJ_G0031353) #7	Lta4h (MGP_PahariEiJ_G0031354) #8	Elk3 (MGP_PahariEiJ_G0031355) #9	Cdk17 (MGP_PahariEiJ_G0031356) #10	Cfap54 (MGP_PahariEiJ_G0031357) #11	Nedd1 (MGP_PahariEiJ_G0031358) #12	Tmpo (MGP_PahariEiJ_G0031359) ##13	Slc25a3 (MGP_PahariEiJ_G0031360) #14	Ikbip (MGP_PahariEiJ_G0031361) #15	Apaf1 (MGP_PahariEiJ_G0031362) #16	Anks1b (MGP_PahariEiJ_G0031363) #17	Uhrf1bp1l (MGP_PahariEiJ_G0031364) #19	Actr6 (MGP_PahariEiJ_G0031365) #20	Scyl2 (MGP_PahariEiJ_G0031366) #22	Slc17a8 (MGP_PahariEiJ_G0031367) #23	Nr1h4 (MGP_PahariEiJ_G0031368) #24	Gas2l3 (MGP_PahariEiJ_G0031369) #25	Ano4 (MGP_PahariEiJ_G0031370) #26	Slc5a8 (MGP_PahariEiJ_G0031371) #27	Utp20 (MGP_PahariEiJ_G0031372) #28	Arl1 (MGP_PahariEiJ_G0031373) #29	Spic (MGP_PahariEiJ_G0031374) #30	Mybpc1 (MGP_PahariEiJ_G0031375) #31	MGP_PahariEiJ_G0031376 #32	Sycp3 (MGP_PahariEiJ_G0031377) #33	Gnptab (MGP_PahariEiJ_G0031378) #34	Dram1 (MGP_PahariEiJ_G0031379) #35	Washc3 (MGP_PahariEiJ_G0031380) #36	Nup37 (MGP_PahariEiJ_G0031381) #37
Rat	MODERN SPECIES	17	Hal (ENSRNOG00000004502) #7	Lta4h (ENSRNOG00000004494) #8	Elk3 (ENSRNOG00000004367) #9	Cdk17 (ENSRNOG00000004148) #10	Cfap54 (ENSRNOG00000024494) #11	Nedd1 (ENSRNOG00000004011) #12	AABR07056611.1 (ENSRNOG00000055726)	ENSRNOG00000064198	Tmpo (ENSRNOG00000008797) #14	Ikbip (ENSRNOG00000008247) #15	Apaf1 (ENSRNOG00000008022) #16	Anks1b (ENSRNOG00000024870) #17	Bltp3b (ENSRNOG00000050317) #19	ENSRNOG00000065049	Actr6 (ENSRNOG00000007875) #20	Scyl2 (ENSRNOG00000024955) #22	Slc17a8 (ENSRNOG00000007581) #23	ENSRNOG00000068987	Nr1h4 (ENSRNOG00000007197) #24	Gas2l3 (ENSRNOG00000063755) #25	LOC103692829 (ENSRNOG00000061320)	AABR07056556.1 (ENSRNOG00000032424)	Ano4 (ENSRNOG00000006841) #26	Slc5a8 (ENSRNOG00000006367) #27	Utp20 (ENSRNOG00000005823) #28	Arl1 (ENSRNOG00000005763) #29	Rps12l4 (ENSRNOG00000043412)	Spic (ENSRNOG00000005720) #30	Mybpc1 (ENSRNOG00000056493) #31	Sycp3 (ENSRNOG00000005270) #33	Chpt1 (ENSRNOG00000058271) #32
Upper Galilee mountains blind mole rat	MODERN SPECIES	1572													ENSNGAG00000017932 #17	Uhrf1bp1l (ENSNGAG00000016616) #19	Actr6 (ENSNGAG00000014912) #20	ENSNGAG00000014516 #22	ENSNGAG00000014156	Slc17a8 (ENSNGAG00000013808) #23
Lesser Egyptian jerboa	MODERN SPECIES	42	Hal (ENSJJAG00000010741) #7	Lta4h (ENSJJAG00000011318) #8	Elk3 (ENSJJAG00000010853) #9	Cdk17 (ENSJJAG00000013291) #10	ENSJJAG00000014966	ENSJJAG00000017399	Nedd1 (ENSJJAG00000010994) #12	Tmpo (ENSJJAG00000018127) ##13	Slc25a3 (ENSJJAG00000013339) #14	ENSJJAG00000017372 #15	Apaf1 (ENSJJAG00000014169) #16	ENSJJAG00000023848 #17	ENSJJAG00000018878 #17	Uhrf1bp1l (ENSJJAG00000023679) #19	Actr6 (ENSJJAG00000012412) #20	ENSJJAG00000014007 #22	Slc17a8 (ENSJJAG00000016274) #23	Nr1h4 (ENSJJAG00000017445) #24	ENSJJAG00000017605 #25	Ano4 (ENSJJAG00000021544) #26	Slc5a8 (ENSJJAG00000018761) #27	Utp20 (ENSJJAG00000019321) #28	ENSJJAG00000020719 #29	Mybpc1 (ENSJJAG00000020768) #31	ENSJJAG00000001967 #32	Sycp3 (ENSJJAG00000017653) #33	ENSJJAG00000022706 #34	Dram1 (ENSJJAG00000023953) #35	Washc3 (ENSJJAG00000019930) #36	Nup37 (ENSJJAG00000018864) #37	ENSJJAG00000021125
Kangaroo rat	MODERN SPECIES	322	Cdk17 (ENSDORG00000014799) #10	ENSDORG00000025108	ENSDORG00000005572	ENSDORG00000025279	ENSDORG00000026947	Nedd1 (ENSDORG00000001204) #12	ENSDORG00000027259	ENSDORG00000023396 #13	Slc25a3 (ENSDORG00000011431) #14	Ikbip (ENSDORG00000011434) #15	Apaf1 (ENSDORG00000009253) #16	ENSDORG00000009254 #17	ENSDORG00000028031 #17	Uhrf1bp1l (ENSDORG00000024278) #19	Actr6 (ENSDORG00000012723) #20	ENSDORG00000003101 #22	Slc17a8 (ENSDORG00000029543) #23	Nr1h4 (ENSDORG00000001224) #24	ENSDORG00000001225 #25	Ano4 (ENSDORG00000001013) #26	Slc5a8 (ENSDORG00000013252) #27	Utp20 (ENSDORG00000014762) #28	Arl1 (ENSDORG00000014770) #29	Spic (ENSDORG00000003709) #30	Mybpc1 (ENSDORG00000004026) #31	Chpt1 (ENSDORG00000004030) #32	ENSDORG00000004032 #33	Gnptab (ENSDORG00000023503) #34	Dram1 (ENSDORG00000003107) #35	Washc3 (ENSDORG00000029910) #36	Nup37 (ENSDORG00000002780) #37
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000153110.B	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118.y.a #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Long-tailed chinchilla	MODERN SPECIES	112	HAL (ENSCLAG00000009969) #7	Lta4h (ENSCLAG00000011828) #8	ELK3 (ENSCLAG00000014957) #9	CDK17 (ENSCLAG00000012821) #10	CFAP54 (ENSCLAG00000008151) #11	NEDD1 (ENSCLAG00000013064) #12	ENSCLAG00000007083	TMPO (ENSCLAG00000007244) #13	SLC25A3 (ENSCLAG00000007243) #14	IKBIP (ENSCLAG00000008628) #15	APAF1 (ENSCLAG00000009227) #16	ANKS1B (ENSCLAG00000009661) #17	ENSCLAG00000009179	BLTP3B (ENSCLAG00000012501) #19	ACTR6 (ENSCLAG00000007878) #20	SCYL2 (ENSCLAG00000010496) #22	SLC17A8 (ENSCLAG00000011320) #23	ENSCLAG00000015655	NR1H4 (ENSCLAG00000012775) #24	GAS2L3 (ENSCLAG00000007654) #25	ANO4 (ENSCLAG00000014090) #26	SLC5A8 (ENSCLAG00000009574) #27	UTP20 (ENSCLAG00000011569) #28	ARL1 (ENSCLAG00000008180) #29	SPIC (ENSCLAG00000016048) #30	MYBPC1 (ENSCLAG00000006936) #31	ENSCLAG00000012024 #32	SYCP3 (ENSCLAG00000006962) #33	GNPTAB (ENSCLAG00000007404) #34	DRAM1 (ENSCLAG00000008068) #35	WASHC3 (ENSCLAG00000008749) #36
Degu	MODERN SPECIES	45	ENSODEG00000010263	ENSODEG00000019742	ENSODEG00000019648	ENSODEG00000013377 ##13	SLC25A3 (ENSODEG00000009995) #14	ENSODEG00000010948 #15	APAF1 (ENSODEG00000010122) #16	ENSODEG00000019813	ENSODEG00000010313 #17	ENSODEG00000010573	ENSODEG00000010991	ENSODEG00000010669 #17	ENSODEG00000011572	BLTP3B (ENSODEG00000010196) #19	ENSODEG00000010649 #20	ENSODEG00000011114 #22	SLC17A8 (ENSODEG00000010869) #23	NR1H4 (ENSODEG00000012027) #24	ENSODEG00000010407 #25	ENSODEG00000009780	ANO4 (ENSODEG00000011009) #26	ENSODEG00000010202	SLC5A8 (ENSODEG00000010696) #27	UTP20 (ENSODEG00000013411) #28	ENSODEG00000010531 #29	SPIC (ENSODEG00000010078) #30	ENSODEG00000010424	MYBPC1 (ENSODEG00000012077) #31	CHPT1 (ENSODEG00000011230) #32	SYCP3 (ENSODEG00000011961) #33	GNPTAB (ENSODEG00000012289) #34
Guinea pig	MODERN SPECIES	9	AMDHD1 (ENSCPOG00000001031)	HAL (ENSCPOG00000013043) #7	LTA4H (ENSCPOG00000013048) #8	ELK3 (ENSCPOG00000005065) #9	CDK17 (ENSCPOG00000005070) #10	CFAP54 (ENSCPOG00000009624) #11	NEDD1 (ENSCPOG00000009631) #12	ENSCPOG00000004978	TMPO (ENSCPOG00000011604) #13	SLC25A3 (ENSCPOG00000011606) #14	IKBIP (ENSCPOG00000040634) #15	APAF1 (ENSCPOG00000015196) #16	ANKS1B (ENSCPOG00000015197) #17	BLTP3B (ENSCPOG00000009379) #19	ACTR6 (ENSCPOG00000024022) #20	SCYL2 (ENSCPOG00000015459) #22	SLC17A8 (ENSCPOG00000009083) #23	NR1H4 (ENSCPOG00000002168) #24	GAS2L3 (ENSCPOG00000036868) #25	ANO4 (ENSCPOG00000008963) #26	SLC5A8 (ENSCPOG00000010055) #27	UTP20 (ENSCPOG00000003129) #28	ARL1 (ENSCPOG00000026014) #29	SPIC (ENSCPOG00000007301) #30	MYBPC1 (ENSCPOG00000011180) #31	CHPT1 (ENSCPOG00000001199) #32	SYCP3 (ENSCPOG00000001202) #33	GNPTAB (ENSCPOG00000022501) #34	ENSCPOG00000034099 #35	WASHC3 (ENSCPOG00000036997) #36	NUP37 (ENSCPOG00000011895) #37
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000006066 #10	CFAP54 (ENSHGLG00000004618) #11	ENSHGLG00000011260	NEDD1 (ENSHGLG00000012733) #12	ENSHGLG00000037736	ENSHGLG00000032527	ENSHGLG00000010848 ##13	ENSHGLG00000008601 #14	IKBIP (ENSHGLG00000047603) #15	ENSHGLG00000049820	APAF1 (ENSHGLG00000007198) #16	ENSHGLG00000016527 #17	ENSHGLG00000041800 #17	BLTP3B (ENSHGLG00000008977) #19	ACTR6 (ENSHGLG00000006255) #20	SCYL2 (ENSHGLG00000004458) #22	SLC17A8 (ENSHGLG00000004252) #23	NR1H4 (ENSHGLG00000038152) #24	ENSHGLG00000006370	ENSHGLG00000039506	ANO4 (ENSHGLG00000010936) #26	SLC5A8 (ENSHGLG00000008465) #27	ENSHGLG00000046315 #29	ENSHGLG00000044877	SPIC (ENSHGLG00000039584) #30	ENSHGLG00000050337 #31	ENSHGLG00000039302	ENSHGLG00000005709 #32	SYCP3 (ENSHGLG00000004845) #33	ENSHGLG00000034643 #34	DRAM1 (ENSHGLG00000009546) #35
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005005745 #10	ENSSVLG00005005778	ENSSVLG00005005829	NEDD1 (ENSSVLG00005005868) #12	ENSSVLG00005006011 ##13	ENSSVLG00005006115 #14	IKBIP (ENSSVLG00005006279) #15	APAF1 (ENSSVLG00005006518) #16	ENSSVLG00005007229	ANKS1B (ENSSVLG00005007585) #17	GARIN6 (ENSSVLG00005008609) #18	ENSSVLG00005008635	ENSSVLG00005008665	BLTP3B (ENSSVLG00005008712) #19	ACTR6 (ENSSVLG00005008778) #20	ENSSVLG00005008897 #22	SLC17A8 (ENSSVLG00005009180) #23	NR1H4 (ENSSVLG00005009339) #24	GAS2L3 (ENSSVLG00005009544) #25	ANO4 (ENSSVLG00005009692) #26	SLC5A8 (ENSSVLG00005010200) #27	ENSSVLG00005010295	UTP20 (ENSSVLG00005010358) #28	ARL1 (ENSSVLG00005007015) #29	ENSSVLG00005007121 #30	MYBPC1 (ENSSVLG00005007401) #31	CHPT1 (ENSSVLG00005008570) #32	SYCP3 (ENSSVLG00005008597) #33	GNPTAB (ENSSVLG00005008675) #34	DRAM1 (ENSSVLG00005008749) #35	WASHC3 (ENSSVLG00005008789) #36
Eurasian red squirrel	MODERN SPECIES		IFFO2 (ENSSVLG00005001755)	UBR4 (ENSSVLG00005001808)	EMC1 (ENSSVLG00005001895)	ENSSVLG00005001942	ENSSVLG00005001971	ENSSVLG00005001993	ENSSVLG00005002008	SLC66A1 (ENSSVLG00005002036)	CAPZB (ENSSVLG00005002066)	ENSSVLG00005002124	ENSSVLG00005002145	NBL1 (ENSSVLG00005002155)	HTR6 (ENSSVLG00005002183)	TMCO4 (ENSSVLG00005002227)	RNF186 (ENSSVLG00005002260)	ENSSVLG00005002272 #22	ENSSVLG00005002288	OTUD3 (ENSSVLG00005002298)	PLA2G2E (ENSSVLG00005002318)	ENSSVLG00005002333	PLA2G2A (ENSSVLG00005002419)	PLA2G5 (ENSSVLG00005002531)	PLA2G2D (ENSSVLG00005002551)	PLA2G2F (ENSSVLG00005002583)	PLA2G2C (ENSSVLG00005002602)	UBXN10 (ENSSVLG00005002615)	VWA5B1 (ENSSVLG00005002638)	CAMK2N1 (ENSSVLG00005002728)	MUL1 (ENSSVLG00005002743)	FAM43B (ENSSVLG00005002758)	ENSSVLG00005002772
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000164546	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.e #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00390000008645	ENSGT00390000009047.b #7	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000163320 #18	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000155118 #29	ENSGT00940000155067.a.e #30	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37
Squirrel	MODERN SPECIES	92									TMPO (ENSSTOG00000009169) #13	SLC25A3 (ENSSTOG00000027633) #14	IKBIP (ENSSTOG00000026100) #15	APAF1 (ENSSTOG00000028539) #16	ANKS1B (ENSSTOG00000012238) #17	BLTP3B (ENSSTOG00000004850) #19	ACTR6 (ENSSTOG00000004895) #20	SCYL2 (ENSSTOG00000011753) #22	SLC17A8 (ENSSTOG00000011763) #23	NR1H4 (ENSSTOG00000011771) #24	GAS2L3 (ENSSTOG00000011780) #25	ANO4 (ENSSTOG00000016283) #26	SLC5A8 (ENSSTOG00000016289) #27	UTP20 (ENSSTOG00000015995) #28	ARL1 (ENSSTOG00000016022) #29	ENSSTOG00000015457 #30	MYBPC1 (ENSSTOG00000003034) #31	CHPT1 (ENSSTOG00000011736) #32	SYCP3 (ENSSTOG00000001853) #33	GNPTAB (ENSSTOG00000001855) #34	DRAM1 (ENSSTOG00000001865) #35	WASHC3 (ENSSTOG00000029775) #36	NUP37 (ENSSTOG00000001874) #37
Arctic ground squirrel	MODERN SPECIES	6	HAL (ENSUPAG00010006474) #7	LTA4H (ENSUPAG00010006436) #8	ELK3 (ENSUPAG00010006425) #9	ENSUPAG00010006422	CDK17 (ENSUPAG00010006388) #10	CFAP54 (ENSUPAG00010006280) #11	NEDD1 (ENSUPAG00010006247) #12	ENSUPAG00010006109 ##13	SLC25A3 (ENSUPAG00010006073) #14	IKBIP (ENSUPAG00010006055) #15	APAF1 (ENSUPAG00010006002) #16	GARIN6 (ENSUPAG00010005992) #18	ANKS1B (ENSUPAG00010003556) #17	BLTP3B (ENSUPAG00010003512) #19	ACTR6 (ENSUPAG00010003498) #20	SCYL2 (ENSUPAG00010003458) #22	SLC17A8 (ENSUPAG00010003443) #23	NR1H4 (ENSUPAG00010003387) #24	GAS2L3 (ENSUPAG00010003356) #25	ENSUPAG00010003346	ANO4 (ENSUPAG00010003185) #26	SLC5A8 (ENSUPAG00010003154) #27	UTP20 (ENSUPAG00010003081) #28	ARL1 (ENSUPAG00010003075) #29	MYBPC1 (ENSUPAG00010002997) #31	CHPT1 (ENSUPAG00010002983) #32	SYCP3 (ENSUPAG00010002966) #33	GNPTAB (ENSUPAG00010002938) #34	DRAM1 (ENSUPAG00010002927) #35	WASHC3 (ENSUPAG00010002918) #36	NUP37 (ENSUPAG00010002890) #37
Alpin marmot	MODERN SPECIES	11	LTA4H (ENSMMMG00000020008) #8	ELK3 (ENSMMMG00000020001) #9	CDK17 (ENSMMMG00000019989) #10	ENSMMMG00000019968	ENSMMMG00000019958	NEDD1 (ENSMMMG00000019953) #12	ENSMMMG00000019863 ##13	SLC25A3 (ENSMMMG00000019846) #14	IKBIP (ENSMMMG00000019840) #15	APAF1 (ENSMMMG00000019774) #16	ENSMMMG00000019768	GARIN6 (ENSMMMG00000019762) #18	ANKS1B (ENSMMMG00000018366) #17	BLTP3B (ENSMMMG00000018268) #19	ACTR6 (ENSMMMG00000018236) #20	SCYL2 (ENSMMMG00000018205) #22	SLC17A8 (ENSMMMG00000018190) #23	NR1H4 (ENSMMMG00000018110) #24	GAS2L3 (ENSMMMG00000018095) #25	ANO4 (ENSMMMG00000017942) #26	SLC5A8 (ENSMMMG00000017894) #27	UTP20 (ENSMMMG00000017841) #28	ARL1 (ENSMMMG00000017821) #29	SPIC (ENSMMMG00000017812) #30	MYBPC1 (ENSMMMG00000017763) #31	CHPT1 (ENSMMMG00000017731) #32	SYCP3 (ENSMMMG00000017715) #33	GNPTAB (ENSMMMG00000017694) #34	DRAM1 (ENSMMMG00000017688) #35	WASHC3 (ENSMMMG00000017678) #36	NUP37 (ENSMMMG00000017664) #37
Lagomorpha	ANCESTRAL SPECIES	22	ENSGT00940000156375 #8	ENSGT00940000157129 #9	ENSGT00940000155834 #10	ENSGT00940000162970	ENSGT00940000162446 #11	ENSGT00390000001561 #12	ENSGT00940000154098.a.d ##13	ENSGT00390000008708 #14	ENSGT00500000045001 #15	ENSGT00940000157710 #16	ENSGT00940000154572.`c #17	ENSGT00940000162770	ENSGT00600000084428.b #19	ENSGT00720000108833 #20	ENSGT00950000182976.a.a #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #27	ENSGT00390000016813 #28	ENSGT00940000158254 #31	ENSGT00950000183117.a.a #32	ENSGT00390000000062.x.a #33	ENSGT00390000006747 #34	ENSGT01030000234578.B.a #35	ENSGT00390000014084 #36	ENSGT00390000010777 #37	ENSGT00390000006088	ENSGT00390000004984
Rabbit	MODERN SPECIES	15	LTA4H (ENSOCUG00000005535) #8	ELK3 (ENSOCUG00000034370) #9	CDK17 (ENSOCUG00000013583) #10	CFAP54 (ENSOCUG00000013917) #11	NEDD1 (ENSOCUG00000010944) #12	ENSOCUG00000012692 ##13	SLC25A3 (ENSOCUG00000011847) #14	IKBIP (ENSOCUG00000011854) #15	APAF1 (ENSOCUG00000011860) #16	ANKS1B (ENSOCUG00000029510) #17	ENSOCUG00000011887	ENSOCUG00000032944 #19	ENSOCUG00000017132 #19	ACTR6 (ENSOCUG00000000141) #20	ENSOCUG00000024669 #21	SCYL2 (ENSOCUG00000009146) #22	SLC17A8 (ENSOCUG00000015995) #23	NR1H4 (ENSOCUG00000007177) #24	GAS2L3 (ENSOCUG00000007182) #25	ENSOCUG00000033171	ANO4 (ENSOCUG00000000881) #26	ENSOCUG00000036878	SLC5A8 (ENSOCUG00000003486) #27	ENSOCUG00000037051	UTP20 (ENSOCUG00000010475) #28	ARL1 (ENSOCUG00000002217) #29	ENSOCUG00000029302	ENSOCUG00000030138	ENSOCUG00000008070 #30	ENSOCUG00000033531	MYBPC1 (ENSOCUG00000009276) #31
Pika	MODERN SPECIES	1374																ENSOPRG00000007982 #22	ENSOPRG00000008010 #23
Tree shrew	MODERN SPECIES	5062																ENSTBEG00000016345 #22	SLC17A8 (ENSTBEG00000016510) #23	NR1H4 (ENSTBEG00000016715) #24	GAS2L3 (ENSTBEG00000016732) #25