Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000162970	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00910000147278	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162970	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162970	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.c #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000156375	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.c #35	ENSGT00390000006747 #36
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00390000009047.b	ENSGT00940000156375	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.c #35	ENSGT00390000006747 #36
Olive baboon	MODERN SPECIES	19	CDK17 (ENSPANG00000023604) #7	ENSPANG00000050074 #8	ENSPANG00000044719 #9	CFAP54 (ENSPANG00000035731) #10	NEDD1 (ENSPANG00000023046) #11	ENSPANG00000019454 #12	ENSPANG00000018018 #13	IKBIP (ENSPANG00000009791) #14	APAF1 (ENSPANG00000011409) #15	ANKS1B (ENSPANG00000008710) #16	ENSPANG00000047895 #17	GARIN6 (ENSPANG00000041130) #18	ENSPANG00000049329 #19	BLTP3B (ENSPANG00000005928) #20	ACTR6 (ENSPANG00000007907) #21	SCYL2 (ENSPANG00000015389) #22	SLC17A8 (ENSPANG00000004049) #23	NR1H4 (ENSPANG00000023009) #24	GAS2L3 (ENSPANG00000013394) #25	ANO4 (ENSPANG00000017946) #26	ENSPANG00000045224 #27	SLC5A8 (ENSPANG00000006619) #28	ARL1 (ENSPANG00000018816) #29	UTP20 (ENSPANG00000020388) #30	ENSPANG00000018239 #31	ENSPANG00000045377 #32	MYBPC1 (ENSPANG00000009790) #33	CHPT1 (ENSPANG00000004451) #34	SYCP3 (ENSPANG00000000419) #35	GNPTAB (ENSPANG00000000420) #36	ENSPANG00000049661 #37
Cercopithecinae_d	ANCESTRAL SPECIES	5	ENSGT00390000009047.b	ENSGT00940000156375	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.c #35	ENSGT00390000006747 #36
Sooty mangabey	MODERN SPECIES	406	HAL (ENSCATG00000016653)	LTA4H (ENSCATG00000043659)	ELK3 (ENSCATG00000035761)	CDK17 (ENSCATG00000008799) #7	CFAP54 (ENSCATG00000040097) #10	NEDD1 (ENSCATG00000040561) #11	ENSCATG00000035402	ENSCATG00000037155 #12	SLC25A3 (ENSCATG00000042696) #13	IKBIP (ENSCATG00000039722) #14	APAF1 (ENSCATG00000042930) #15	GARIN6 (ENSCATG00000039282) #18	ANKS1B (ENSCATG00000034542) #16	BLTP3B (ENSCATG00000035719) #20	ACTR6 (ENSCATG00000035115) #21	SCYL2 (ENSCATG00000028764) #22	SLC17A8 (ENSCATG00000043531) #23	NR1H4 (ENSCATG00000042241) #24	ENSCATG00000035203	GAS2L3 (ENSCATG00000040264) #25	ANO4 (ENSCATG00000039666) #26	SLC5A8 (ENSCATG00000021653) #28	UTP20 (ENSCATG00000035636) #30	ENSCATG00000020659	ARL1 (ENSCATG00000040389) #29	ENSCATG00000039921 #31	MYBPC1 (ENSCATG00000036055) #33	CHPT1 (ENSCATG00000040898) #34	ENSCATG00000041189 #35	GNPTAB (ENSCATG00000041157) #36	DRAM1 (ENSCATG00000034964)
Drill	MODERN SPECIES	1084							ENSMLEG00000032476	ENSMLEG00000040746 #12	SLC25A3 (ENSMLEG00000030898) #13	IKBIP (ENSMLEG00000033117) #14	APAF1 (ENSMLEG00000036093) #15	GARIN6 (ENSMLEG00000041924) #18	ANKS1B (ENSMLEG00000035476) #16	BLTP3B (ENSMLEG00000029606) #20	ACTR6 (ENSMLEG00000044194) #21	SCYL2 (ENSMLEG00000029042) #22	SLC17A8 (ENSMLEG00000039757) #23
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000156375	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000154632.q.a.a.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00910000147311	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.c #35	ENSGT00390000006747 #36
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000155834 #7	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00390000017580.`b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00910000148587	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.a.b ##9	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00940000159389 #25	ENSGT00950000183123.g.a.b.b.r.b.b.a	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.c #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a	ENSGT00390000014084
Crab-eating macaque	MODERN SPECIES	2	ENSMFAG00000030299	ENSMFAG00000037885 #12	ENSMFAG00000055805	SLC25A3 (ENSMFAG00000000145) #13	ENSMFAG00000051788 #14	IKBIP (ENSMFAG00000045834) #14	APAF1 (ENSMFAG00000039197) #15	ANKS1B (ENSMFAG00000032660) #16	ENSMFAG00000062988	ENSMFAG00000049863	GARIN6 (ENSMFAG00000044311) #18	BLTP3B (ENSMFAG00000010028) #20	ENSMFAG00000051648 ##9	ACTR6 (ENSMFAG00000040575) #21	ENSMFAG00000053279	SCYL2 (ENSMFAG00000028879) #22	SLC17A8 (ENSMFAG00000002114) #23	NR1H4 (ENSMFAG00000002236) #24	GAS2L3 (ENSMFAG00000003398) #25	ANO4 (ENSMFAG00000036524) #26	ENSMFAG00000031324	SLC5A8 (ENSMFAG00000031305) #28	UTP20 (ENSMFAG00000037766) #30	ARL1 (ENSMFAG00000035725) #29	ENSMFAG00000003748 #31	MYBPC1 (ENSMFAG00000038552) #33	CHPT1 (ENSMFAG00000045187) #34	SYCP3 (ENSMFAG00000037508) #35	GNPTAB (ENSMFAG00000038457) #36	ENSMFAG00000060846	DRAM1 (ENSMFAG00000042396)
Rhesus	MODERN SPECIES	2	NEDD1 (ENSMMUG00000004093) #11	ENSMMUG00000001354	ENSMMUG00000063079	TMPO (ENSMMUG00000023719) #12	SLC25A3 (ENSMMUG00000023036) #13	IKBIP (ENSMMUG00000051674) #14	APAF1 (ENSMMUG00000022404) #15	ANKS1B (ENSMMUG00000022406) #16	ENSMMUG00000062511	ENSMMUG00000054350 ##27	GARIN6 (ENSMMUG00000002178) #18	ENSMMUG00000058638 ##27	BLTP3B (ENSMMUG00000023601) #20	ENSMMUG00000063774 ##9	ACTR6 (ENSMMUG00000023603) #21	SCYL2 (ENSMMUG00000023600) #22	SLC17A8 (ENSMMUG00000017646) #23	NR1H4 (ENSMMUG00000003571) #24	GAS2L3 (ENSMMUG00000020360) #25	ANO4 (ENSMMUG00000018718) #26	ENSMMUG00000055254	SLC5A8 (ENSMMUG00000015134) #28	UTP20 (ENSMMUG00000012891) #30	ARL1 (ENSMMUG00000031610) #29	ENSMMUG00000061260 #31	MYBPC1 (ENSMMUG00000020875) #33	CHPT1 (ENSMMUG00000020877) #34	SYCP3 (ENSMMUG00000063989) #35	GNPTAB (ENSMMUG00000012562) #36	DRAM1 (ENSMMUG00000042077)	WASHC3 (ENSMMUG00000046478)
Pig-tailed macaque	MODERN SPECIES	206				LINGO2 (ENSMNEG00000014874)	C9orf72 (ENSMNEG00000032167)	MOB3B (ENSMNEG00000032479)	EQTN (ENSMNEG00000012016)	TEK (ENSMNEG00000036308)	LRRC19 (ENSMNEG00000030147)	IFT74 (ENSMNEG00000031183)	PLAA (ENSMNEG00000026616)	CAAP1 (ENSMNEG00000038989)	ENSMNEG00000000447	BLTP3B (ENSMNEG00000036255) #20	ACTR6 (ENSMNEG00000045418) #21	SCYL2 (ENSMNEG00000039352) #22	SLC17A8 (ENSMNEG00000034787) #23	NR1H4 (ENSMNEG00000029077) #24	ENSMNEG00000034160	GAS2L3 (ENSMNEG00000043688) #25	ENSMNEG00000038922	ANO4 (ENSMNEG00000035796) #26	SLC5A8 (ENSMNEG00000044791) #28	UTP20 (ENSMNEG00000037418) #30	ENSMNEG00000030959	ENSMNEG00000010988	ARL1 (ENSMNEG00000007067) #29	ENSMNEG00000041759 #31	MYBPC1 (ENSMNEG00000030777) #33	CHPT1 (ENSMNEG00000021213) #34	ENSMNEG00000041521 #35
Vervet Monkey	DUPLICATION
Vervet Monkey	MODERN SPECIES	2	ENSCSAG00000003566	ENSCSAG00000003561 #10	NEDD1 (ENSCSAG00000003548) #11	ENSCSAG00000003543	TMPO (ENSCSAG00000003541) ##12	SLC25A3 (ENSCSAG00000003535) #13	IKBIP (ENSCSAG00000003532) #14	APAF1 (ENSCSAG00000003526) #15	ENSCSAG00000003515 #16	ENSCSAG00000003498	ENSCSAG00000003493	ENSCSAG00000003488 #16	GARIN6 (ENSCSAG00000003485) #18	BLTP3B (ENSCSAG00000003481) #20	ACTR6 (ENSCSAG00000003476) #21	ENSCSAG00000003470 #22	ENSCSAG00000003466 #22	SLC17A8 (ENSCSAG00000003460) #23	NR1H4 (ENSCSAG00000003451) #24	GAS2L3 (ENSCSAG00000003446) #25	ANO4 (ENSCSAG00000003436) #26	SLC5A8 (ENSCSAG00000003405) #28	UTP20 (ENSCSAG00000003388) #30	ARL1 (ENSCSAG00000003368) #29	ENSCSAG00000003364 #31	MYBPC1 (ENSCSAG00000003356) #33	CHPT1 (ENSCSAG00000003350) #34	ENSCSAG00000003341 #35	GNPTAB (ENSCSAG00000003332) #36	DRAM1 (ENSCSAG00000003324)	WASHC3 (ENSCSAG00000003320)
Vervet Monkey	MODERN SPECIES	2	ENSCSAG00000003561 #10	NEDD1 (ENSCSAG00000003548) #11	ENSCSAG00000003543	TMPO (ENSCSAG00000003541) ##12	SLC25A3 (ENSCSAG00000003535) #13	IKBIP (ENSCSAG00000003532) #14	APAF1 (ENSCSAG00000003526) #15	ENSCSAG00000003515 #16	ENSCSAG00000003498	ENSCSAG00000003493	ENSCSAG00000003488 #16	GARIN6 (ENSCSAG00000003485) #18	BLTP3B (ENSCSAG00000003481) #20	ACTR6 (ENSCSAG00000003476) #21	ENSCSAG00000003470 #22	ENSCSAG00000003466 #22	SLC17A8 (ENSCSAG00000003460) #23	NR1H4 (ENSCSAG00000003451) #24	GAS2L3 (ENSCSAG00000003446) #25	ANO4 (ENSCSAG00000003436) #26	SLC5A8 (ENSCSAG00000003405) #28	UTP20 (ENSCSAG00000003388) #30	ARL1 (ENSCSAG00000003368) #29	ENSCSAG00000003364 #31	MYBPC1 (ENSCSAG00000003356) #33	CHPT1 (ENSCSAG00000003350) #34	ENSCSAG00000003341 #35	GNPTAB (ENSCSAG00000003332) #36	DRAM1 (ENSCSAG00000003324)	WASHC3 (ENSCSAG00000003320)	NUP37 (ENSCSAG00000003314)
Rhinopithecus	ANCESTRAL SPECIES	97													ENSGT00600000084428.b #20	ENSGT00530000062932.c.a.a.a.a.a.b.b	ENSGT00720000108833 #21	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.f.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.a #31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a	ENSGT00390000014084
Golden snub-nosed monkey	MODERN SPECIES	2437												ENSRROG00000002184 #16	BLTP3B (ENSRROG00000035458) #20	ENSRROG00000033398	ACTR6 (ENSRROG00000042456) #21	SCYL2 (ENSRROG00000045785) #22	SLC17A8 (ENSRROG00000034592) #23	NR1H4 (ENSRROG00000040390) #24	ENSRROG00000033315	GAS2L3 (ENSRROG00000029219) #25
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	863									ENSRBIG00000032382	GARIN6 (ENSRBIG00000033826) #18	ENSRBIG00000039980	ENSRBIG00000035139 #16	BLTP3B (ENSRBIG00000033336) #20	ENSRBIG00000031056	ACTR6 (ENSRBIG00000035135) #21	SCYL2 (ENSRBIG00000029723) #22	SLC17A8 (ENSRBIG00000027160) #23	NR1H4 (ENSRBIG00000033064) #24	ENSRBIG00000039933	GAS2L3 (ENSRBIG00000028898) #25	ANO4 (ENSRBIG00000030209) #26	SLC5A8 (ENSRBIG00000026396) #28	UTP20 (ENSRBIG00000025384) #30	ARL1 (ENSRBIG00000042560) #29	MYBPC1 (ENSRBIG00000005217) #33	CHPT1 (ENSRBIG00000042339) #34	SYCP3 (ENSRBIG00000031659) #35	SH3RF3 (ENSRBIG00000035937)	SEPTIN10 (ENSRBIG00000039970)
Black snub-nosed monkey	MODERN SPECIES	71												ENSRBIG00000010556	STRADB (ENSRBIG00000039112)	ENSRBIG00000034741	TRAK2 (ENSRBIG00000027774)	ENSRBIG00000041242 #22	ENSRBIG00000016044	ENSRBIG00000041736	ENSRBIG00000021678	ENSRBIG00000029069	FLACC1 (ENSRBIG00000033862)	ENSRBIG00000011046	CASP8 (ENSRBIG00000044586)	ENSRBIG00000038761	CASP10 (ENSRBIG00000034022)	CFLAR (ENSRBIG00000028528)	NDUFB3 (ENSRBIG00000022999)	HYCC2 (ENSRBIG00000031079)	ORC2 (ENSRBIG00000033127)	NIF3L1 (ENSRBIG00000024376)	ENSRBIG00000038949
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000156449	ENSGT00390000008128.c.a.a	ENSGT00940000153534.A	ENSGT00940000154319.u.b.a.b	ENSGT00390000000685.o.a	ENSGT00940000154319.u.a.d	ENSGT00860000133854	ENSGT00940000158239.b	ENSGT00940000159606	ENSGT00940000155861.C	ENSGT00940000156444	ENSGT00390000005159	ENSGT00390000018209	ENSGT00940000155390.a	ENSGT00880000138031.i ##22	ENSGT00880000138031.j #22	ENSGT00940000158202	ENSGT00400000022323	ENSGT00940000160319	ENSGT00940000160994	ENSGT00940000154156.d.n.b.b.b	ENSGT00530000064199	ENSGT00390000010316.j.a	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000003590	ENSGT00940000153189.B	ENSGT00940000159722	ENSGT00390000012561.b	ENSGT00950000183114.a.b.b.f.a.b	ENSGT00950000183114.a.b.b.f.b
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000157129	ENSGT00940000155834 #7	ENSGT00940000162446 #10	ENSGT00390000001561 #11	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00940000163320 #18	ENSGT00600000084428.b #20	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b ##31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a	ENSGT00390000014084
Orangutan	MODERN SPECIES	3	LTA4H (ENSPPYG00000004851)	ELK3 (ENSPPYG00000004852)	CDK17 (ENSPPYG00000004853) #7	CFAP54 (ENSPPYG00000004855) #10	NEDD1 (ENSPPYG00000004856) #11	ENSPPYG00000004857 #12	SLC25A3 (ENSPPYG00000004858) #13	IKBIP (ENSPPYG00000040489) #14	APAF1 (ENSPPYG00000004860) #15	ANKS1B (ENSPPYG00000004861) #16	ENSPPYG00000004862 #18	BLTP3B (ENSPPYG00000004863) #20	ENSPPYG00000033741	ACTR6 (ENSPPYG00000004864) #21	ENSPPYG00000032292	SCYL2 (ENSPPYG00000004865) #22	SLC17A8 (ENSPPYG00000004866) #23	NR1H4 (ENSPPYG00000004867) #24	ENSPPYG00000040948	GAS2L3 (ENSPPYG00000004868) #25	ANO4 (ENSPPYG00000004869) #26	SLC5A8 (ENSPPYG00000004870) #28	UTP20 (ENSPPYG00000004871) #30	ENSPPYG00000004872 #29	SPIC (ENSPPYG00000004873) ##31	MYBPC1 (ENSPPYG00000004874) #33	CHPT1 (ENSPPYG00000004875) #34	SYCP3 (ENSPPYG00000004876) #35	GNPTAB (ENSPPYG00000004877) #36	ENSPPYG00000037004	WASHC3 (ENSPPYG00000004878)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00950000183105.B.a.a.a.b	ENSGT00910000147278	ENSGT00910000147996	ENSGT00940000163320 #18	ENSGT00390000005569.x.a.a.a.b	ENSGT00600000084428.b #20	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b ##31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a	ENSGT00390000014084
Gorilla	MODERN SPECIES	3	ENSGGOG00000039481	ENSGGOG00000003388 #12	SLC25A3 (ENSGGOG00000015886) #13	IKBIP (ENSGGOG00000008397) #14	APAF1 (ENSGGOG00000008401) #15	ANKS1B (ENSGGOG00000008413) #16	ENSGGOG00000039927	ENSGGOG00000040544	ENSGGOG00000042686	GARIN6 (ENSGGOG00000028296) #18	ENSGGOG00000040695	BLTP3B (ENSGGOG00000022523) #20	ENSGGOG00000023818	ACTR6 (ENSGGOG00000000854) #21	ENSGGOG00000010270	SCYL2 (ENSGGOG00000002948) #22	SLC17A8 (ENSGGOG00000016824) #23	NR1H4 (ENSGGOG00000008137) #24	GAS2L3 (ENSGGOG00000003196) #25	ENSGGOG00000038498	ANO4 (ENSGGOG00000000193) #26	SLC5A8 (ENSGGOG00000004017) #28	UTP20 (ENSGGOG00000004904) #30	ARL1 (ENSGGOG00000010788) #29	SPIC (ENSGGOG00000024597) ##31	MYBPC1 (ENSGGOG00000010147) #33	CHPT1 (ENSGGOG00000007397) #34	SYCP3 (ENSGGOG00000002946) #35	GNPTAB (ENSGGOG00000009796) #36	ENSGGOG00000012314	DRAM1 (ENSGGOG00000003761)
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00950000183105.B.a.a.a.b	ENSGT00910000147278	ENSGT00910000147996	ENSGT00940000163320 #18	ENSGT00390000005569.x.a.a.a.b	ENSGT00600000084428.b #20	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b ##31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a	ENSGT00390000014084
Human	MODERN SPECIES	3	HAL (ENSG00000084110)	LTA4H (ENSG00000111144)	ELK3 (ENSG00000111145)	CDK17 (ENSG00000059758) #7	CFAP54 (ENSG00000188596) #10	NEDD1 (ENSG00000139350) #11	TMPO (ENSG00000120802) ##12	SLC25A3 (ENSG00000075415) #13	IKBIP (ENSG00000166130) #14	APAF1 (ENSG00000120868) #15	ANKS1B (ENSG00000185046) #16	GARIN6 (ENSG00000180219) #18	BLTP3B (ENSG00000111647) #20	ACTR6 (ENSG00000075089) #21	DEPDC4 (ENSG00000166153)	SCYL2 (ENSG00000136021) #22	SLC17A8 (ENSG00000179520) #23	NR1H4 (ENSG00000012504) #24	GAS2L3 (ENSG00000139354) #25	ANO4 (ENSG00000151572) #26	SLC5A8 (ENSG00000256870) #28	UTP20 (ENSG00000120800) #30	ARL1 (ENSG00000120805) #29	SPIC (ENSG00000166211) ##31	MYBPC1 (ENSG00000196091) #33	CHPT1 (ENSG00000111666) #34	SYCP3 (ENSG00000139351) #35	GNPTAB (ENSG00000111670) #36	DRAM1 (ENSG00000136048)	WASHC3 (ENSG00000120860)	NUP37 (ENSG00000075188)
Pan	ANCESTRAL SPECIES	4	ENSGT00940000153460.c.a.b	ENSGT00940000154098.a.d #12	ENSGT00390000008708 #13	ENSGT00500000045001 #14	ENSGT00940000157710 #15	ENSGT00940000154572.`c #16	ENSGT00950000183105.B.a.a.a.b	ENSGT00910000147278	ENSGT00910000147996	ENSGT00940000163320 #18	ENSGT00390000005569.x.a.a.a.b	ENSGT00600000084428.b #20	ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b	ENSGT00720000108833 #21	ENSGT00950000182976.a.a	ENSGT00880000138031.j #22	ENSGT00940000158187 #23	ENSGT00940000158037 #24	ENSGT00390000014405.e.b	ENSGT00940000159389 #25	ENSGT00940000158600 #26	ENSGT00940000155166.A #28	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155067.a.a.b ##31	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a	ENSGT00390000014084
Bonobo	MODERN SPECIES	3	ENSPPAG00000031102 #12	SLC25A3 (ENSPPAG00000029167) #13	IKBIP (ENSPPAG00000003106) #14	APAF1 (ENSPPAG00000031677) #15	ANKS1B (ENSPPAG00000026584) #16	ENSPPAG00000040891	ENSPPAG00000040779	ENSPPAG00000043599	ENSPPAG00000020393	GARIN6 (ENSPPAG00000031008) #18	ENSPPAG00000042658	BLTP3B (ENSPPAG00000034670) #20	ENSPPAG00000035717	ACTR6 (ENSPPAG00000035162) #21	ENSPPAG00000033600	SCYL2 (ENSPPAG00000032245) #22	SLC17A8 (ENSPPAG00000041738) #23	NR1H4 (ENSPPAG00000027056) #24	GAS2L3 (ENSPPAG00000032303) #25	ENSPPAG00000042869	ANO4 (ENSPPAG00000037910) #26	SLC5A8 (ENSPPAG00000038189) #28	UTP20 (ENSPPAG00000001381) #30	ARL1 (ENSPPAG00000034860) #29	SPIC (ENSPPAG00000029437) ##31	MYBPC1 (ENSPPAG00000027978) #33	ENSPPAG00000029593 #34	SYCP3 (ENSPPAG00000031232) #35	GNPTAB (ENSPPAG00000041156) #36	DRAM1 (ENSPPAG00000043812)	WASHC3 (ENSPPAG00000040130)
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	3	ENSPTRG00000039568	TMPO (ENSPTRG00000005331) #12	SLC25A3 (ENSPTRG00000005333) #13	ENSPTRG00000005334 #14	APAF1 (ENSPTRG00000005335) #15	ANKS1B (ENSPTRG00000005336) #16	ENSPTRG00000044995	ENSPTRG00000046979	ENSPTRG00000043655	GARIN6 (ENSPTRG00000005338) #18	ENSPTRG00000047093	BLTP3B (ENSPTRG00000005339) #20	ENSPTRG00000047818	ACTR6 (ENSPTRG00000005341) #21	DEPDC4 (ENSPTRG00000039541)	SCYL2 (ENSPTRG00000051978) #22	SLC17A8 (ENSPTRG00000005344) #23	NR1H4 (ENSPTRG00000005345) #24	ENSPTRG00000051429	GAS2L3 (ENSPTRG00000005346) #25	ANO4 (ENSPTRG00000005347) #26	SLC5A8 (ENSPTRG00000005348) #28	UTP20 (ENSPTRG00000005349) #30	ARL1 (ENSPTRG00000005350) #29	SPIC (ENSPTRG00000005351) ##31	MYBPC1 (ENSPTRG00000005353) #33	CHPT1 (ENSPTRG00000005354) #34	SYCP3 (ENSPTRG00000005355) #35	GNPTAB (ENSPTRG00000005356) #36	ENSPTRG00000031146	DRAM1 (ENSPTRG00000005357)
Chimpanzee	MODERN SPECIES	520																ENSPTRG00000005343 #22
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES		ZNF701 (ENSNLEG00000006043)	ENSNLEG00000006045	ZNF611 (ENSNLEG00000006047)	ZNF28 (ENSNLEG00000006051)	ENSNLEG00000035292	ZNF468 (ENSNLEG00000027937)	ZNF320 (ENSNLEG00000006053)	ZNF888 (ENSNLEG00000030045)	ZNF816 (ENSNLEG00000034515)	ENSNLEG00000029357	ENSNLEG00000018769	ZNF160 (ENSNLEG00000032951)	ZNF415 (ENSNLEG00000027833)	ZNF347 (ENSNLEG00000006065)	ENSNLEG00000030103	SCYL2 (ENSNLEG00000006068) #22	SLC17A8 (ENSNLEG00000006078) #23	NR1H4 (ENSNLEG00000006093) #24	GAS2L3 (ENSNLEG00000006116) #25	ENSNLEG00000028974	ANO4 (ENSNLEG00000006128) #26	ENSNLEG00000032249	SLC5A8 (ENSNLEG00000006157) #28	UTP20 (ENSNLEG00000006166) #30	ARL1 (ENSNLEG00000006223) #29	SPIC (ENSNLEG00000006232) ##31	MYBPC1 (ENSNLEG00000006235) #33	CHPT1 (ENSNLEG00000006332) #34	SYCP3 (ENSNLEG00000006341) #35	GNPTAB (ENSNLEG00000006356) #36	DRAM1 (ENSNLEG00000006362)
Gibbon	MODERN SPECIES	14	ENSNLEG00000029928	ENSNLEG00000007009	BMPR2 (ENSNLEG00000007004)	ENSNLEG00000031345	NOP58 (ENSNLEG00000007000)	SUMO1 (ENSNLEG00000006997)	KIAA2012 (ENSNLEG00000006992)	FZD7 (ENSNLEG00000035997)	CDK15 (ENSNLEG00000006990)	ALS2 (ENSNLEG00000006980)	MPP4 (ENSNLEG00000006977)	TMEM237 (ENSNLEG00000006974)	ENSNLEG00000006972	ENSNLEG00000034127	STRADB (ENSNLEG00000006967)	ENSNLEG00000033546 #22	TRAK2 (ENSNLEG00000006960)	FLACC1 (ENSNLEG00000006956)	CASP8 (ENSNLEG00000032856)	CASP10 (ENSNLEG00000006951)	ENSNLEG00000030686	CFLAR (ENSNLEG00000006947)	NDUFB3 (ENSNLEG00000006946)	HYCC2 (ENSNLEG00000006941)	ORC2 (ENSNLEG00000006938)	NIF3L1 (ENSNLEG00000006935)	PPIL3 (ENSNLEG00000034236)	CLK1 (ENSNLEG00000032526)	BZW1 (ENSNLEG00000006929)	ENSNLEG00000029066	AOX1 (ENSNLEG00000006920)