Bos	ANCESTRAL SPECIES	2	ENSGT00940000157129 #7	ENSGT00940000155834 #8	ENSGT00940000162970	ENSGT01030000235320	ENSGT00940000162446 #9	ENSGT00390000001561 #10	ENSGT00940000154098.a.d #13	ENSGT00390000008708 #15	ENSGT00500000045001 #16	ENSGT00940000157710 #17	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b #18	ENSGT00940000154572.`c #19	ENSGT00940000170157	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600.d #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118.o #30	ENSGT00940000154612.m.a.c #31	ENSGT00940000155067.a #32	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a #37	ENSGT00870000136537.j
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000156375	ENSGT00940000157129 #7	ENSGT00940000155834 #8	ENSGT00940000162446 #9	ENSGT00390000001561 #10	ENSGT00940000154098.a.d #13	ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b #11	ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b #12	ENSGT00390000008708 #15	ENSGT00500000045001 #16	ENSGT00940000157710 #17	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b #18	ENSGT00940000154572.`c #19	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600.d #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118.o #30	ENSGT00940000154612.m.a.c #31	ENSGT00940000155067.a #32	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a #37	ENSGT00870000136537.j
Domestic yak	MODERN SPECIES	24	ELK3 (ENSBGRG00000006178) #7	CDK17 (ENSBGRG00000005998) #8	CFAP54 (ENSBGRG00000005654) #9	NEDD1 (ENSBGRG00000005492) #10	ENSBGRG00000005471 #11	ENSBGRG00000005452 #12	ENSBGRG00000005328 #13	ENSBGRG00000005289 #14	SLC25A3 (ENSBGRG00000005230) #15	IKBIP (ENSBGRG00000005194) #16	APAF1 (ENSBGRG00000004769) #17	ENSBGRG00000004690 #18	ANKS1B (ENSBGRG00000003686) #19	BLTP3B (ENSBGRG00000003515) #20	ENSBGRG00000003369 #21	SCYL2 (ENSBGRG00000003248) #22	SLC17A8 (ENSBGRG00000003178) #23	ENSBGRG00000003155 #24	NR1H4 (ENSBGRG00000003123) #25	GAS2L3 (ENSBGRG00000003088) #26	ANO4 (ENSBGRG00000002904) #27	SLC5A8 (ENSBGRG00000002819) #28	UTP20 (ENSBGRG00000002781) #29	ARL1 (ENSBGRG00000002671) #30	ENSBGRG00000002653 #31	ENSBGRG00000002632 #32	MYBPC1 (ENSBGRG00000001036) #33	CHPT1 (ENSBGRG00000000795) #34	SYCP3 (ENSBGRG00000000767) #35	GNPTAB (ENSBGRG00000000629) #36	DRAM1 (ENSBGRG00000000571) #37
Wild yak	MODERN SPECIES	254												ANKS1B (ENSBMUG00000024131) #19	ENSBMUG00000024142	BLTP3B (ENSBMUG00000024161) #20	ENSBMUG00000024199 #21	SCYL2 (ENSBMUG00000024260) #22	SLC17A8 (ENSBMUG00000024293) #23	NR1H4 (ENSBMUG00000024339) #25	ENSBMUG00000024355 #26	ENSBMUG00000024358 #26	ENSBMUG00000024366
Bos_b	ANCESTRAL SPECIES	22	ENSGT00940000162970	ENSGT01030000235320	ENSGT00940000162446 #9	ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b #11	ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b #12	ENSGT00390000001561 #10	ENSGT00940000154098.a.d #13	ENSGT00390000008708 #15	ENSGT00500000045001 #16	ENSGT00940000157710 #17	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b #18	ENSGT00940000154572.`c #19	ENSGT00940000170157	ENSGT00600000084428.b #20	ENSGT00720000108833 #21	ENSGT00880000138031 #22	ENSGT00940000158187 #23	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600.d #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118.o #30	ENSGT00940000154612.m.a.c #31	ENSGT00940000155067.a #32	ENSGT00940000158254 #33	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a #35	ENSGT00390000006747 #36	ENSGT01030000234578.B.a #37	ENSGT00870000136537.j
Hybrid Bos Indicus	MODERN SPECIES	24	CDK17 (ENSBIXG00005002870) #8	CFAP54 (ENSBIXG00005017724) #9	ENSBIXG00005017766 #11	NEDD1 (ENSBIXG00005017834) #10	ENSBIXG00005005430 #13	SLC25A3 (ENSBIXG00005005592) #15	IKBIP (ENSBIXG00005018134) #16	APAF1 (ENSBIXG00005018257) #17	ENSBIXG00005018298 #18	ENSBIXG00005018300 ##11	ENSBIXG00005002963	ANKS1B (ENSBIXG00005018683) #19	ENSBIXG00005018751 ##11	BLTP3B (ENSBIXG00005018834) #20	ACTR6 (ENSBIXG00005018932) #21	SCYL2 (ENSBIXG00005019128) #22	SLC17A8 (ENSBIXG00005019172) #23	NR1H4 (ENSBIXG00005019293) #25	GAS2L3 (ENSBIXG00005019358) #26	ENSBIXG00005003144	ANO4 (ENSBIXG00005003189) #27	ENSBIXG00005019628 ##11	SLC5A8 (ENSBIXG00005019682) #28	ENSBIXG00005019697 ##11	UTP20 (ENSBIXG00005003225) #29	ARL1 (ENSBIXG00005019884) #30	ENSBIXG00005003254 #31	SPIC (ENSBIXG00005019938) #32	ENSBIXG00005019949 ##14	MYBPC1 (ENSBIXG00005020157) #33	CHPT1 (ENSBIXG00005020232) #34
Cow	MODERN SPECIES	24	ENSBTAG00000052520	CFAP54 (ENSBTAG00000015792) #9	NEDD1 (ENSBTAG00000001894) #10	ENSBTAG00000051433 #11	ENSBTAG00000045919 #12	TMPO (ENSBTAG00000004240) ##13	SLC25A3 (ENSBTAG00000012890) #15	IKBIP (ENSBTAG00000021660) #16	APAF1 (ENSBTAG00000021661) #17	ENSBTAG00000030994 #19	ENSBTAG00000025812	ENSBTAG00000013979 #19	ENSBTAG00000048834	BLTP3B (ENSBTAG00000006040) #20	ACTR6 (ENSBTAG00000013842) #21	SCYL2 (ENSBTAG00000013859) #22	SLC17A8 (ENSBTAG00000001088) #23	NR1H4 (ENSBTAG00000013596) #25	GAS2L3 (ENSBTAG00000049308) #26	ANO4 (ENSBTAG00000004145) #27	SLC5A8 (ENSBTAG00000011525) #28	UTP20 (ENSBTAG00000003239) #29	ARL1 (ENSBTAG00000011883) #30	ENSBTAG00000008020 #31	SPIC (ENSBTAG00000009904) #32	MYBPC1 (ENSBTAG00000011392) #33	ENSBTAG00000048643 ##14	CHPT1 (ENSBTAG00000002490) #34	SYCP3 (ENSBTAG00000002492) #35	GNPTAB (ENSBTAG00000019409) #36	DRAM1 (ENSBTAG00000017287) #37