Pecora ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 ENSGT01030000235320 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT00940000154572.`c #19 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Percora_a ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 ENSGT01030000235320 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT00940000154572.`c #19 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Bovidae ANCESTRAL SPECIES 3 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 ENSGT01030000235320 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT00940000154572.`c #19 ENSGT00940000163320 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Bovinae ANCESTRAL SPECIES 10 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 ENSGT01030000235320 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT00940000154572.`c #19 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000154612.m.a.c #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Bos ANCESTRAL SPECIES 2 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 ENSGT01030000235320 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b #18 ENSGT00940000154572.`c #19 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000154612.m.a.c #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Bos_a ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b #11 ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b #12 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b #18 ENSGT00940000154572.`c #19 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000154612.m.a.c #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Domestic yak MODERN SPECIES 24 ELK3 (ENSBGRG00000006178) #7 CDK17 (ENSBGRG00000005998) #8 CFAP54 (ENSBGRG00000005654) #9 NEDD1 (ENSBGRG00000005492) #10 ENSBGRG00000005471 #11 ENSBGRG00000005452 #12 ENSBGRG00000005328 #13 ENSBGRG00000005289 #14 SLC25A3 (ENSBGRG00000005230) #15 IKBIP (ENSBGRG00000005194) #16 APAF1 (ENSBGRG00000004769) #17 ENSBGRG00000004690 #18 ANKS1B (ENSBGRG00000003686) #19 BLTP3B (ENSBGRG00000003515) #20 ENSBGRG00000003369 #21 SCYL2 (ENSBGRG00000003248) #22 SLC17A8 (ENSBGRG00000003178) #23 ENSBGRG00000003155 #24 NR1H4 (ENSBGRG00000003123) #25 GAS2L3 (ENSBGRG00000003088) #26 ANO4 (ENSBGRG00000002904) #27 SLC5A8 (ENSBGRG00000002819) #28 UTP20 (ENSBGRG00000002781) #29 ARL1 (ENSBGRG00000002671) #30 ENSBGRG00000002653 #31 ENSBGRG00000002632 #32 MYBPC1 (ENSBGRG00000001036) #33 CHPT1 (ENSBGRG00000000795) #34 SYCP3 (ENSBGRG00000000767) #35 GNPTAB (ENSBGRG00000000629) #36 DRAM1 (ENSBGRG00000000571) #37 Wild yak MODERN SPECIES 254 ANKS1B (ENSBMUG00000024131) #19 ENSBMUG00000024142 BLTP3B (ENSBMUG00000024161) #20 ENSBMUG00000024199 #21 SCYL2 (ENSBMUG00000024260) #22 SLC17A8 (ENSBMUG00000024293) #23 NR1H4 (ENSBMUG00000024339) #25 ENSBMUG00000024355 #26 ENSBMUG00000024358 #26 ENSBMUG00000024366 Bos_b ANCESTRAL SPECIES 22 ENSGT00940000162970 ENSGT01030000235320 ENSGT00940000162446 #9 ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b #11 ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b #12 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00940000157710 #17 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b #18 ENSGT00940000154572.`c #19 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000154612.m.a.c #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Hybrid Bos Indicus MODERN SPECIES 24 CDK17 (ENSBIXG00005002870) #8 CFAP54 (ENSBIXG00005017724) #9 ENSBIXG00005017766 #11 NEDD1 (ENSBIXG00005017834) #10 ENSBIXG00005005430 #13 SLC25A3 (ENSBIXG00005005592) #15 IKBIP (ENSBIXG00005018134) #16 APAF1 (ENSBIXG00005018257) #17 ENSBIXG00005018298 #18 ENSBIXG00005018300 ##11 ENSBIXG00005002963 ANKS1B (ENSBIXG00005018683) #19 ENSBIXG00005018751 ##11 BLTP3B (ENSBIXG00005018834) #20 ACTR6 (ENSBIXG00005018932) #21 SCYL2 (ENSBIXG00005019128) #22 SLC17A8 (ENSBIXG00005019172) #23 NR1H4 (ENSBIXG00005019293) #25 GAS2L3 (ENSBIXG00005019358) #26 ENSBIXG00005003144 ANO4 (ENSBIXG00005003189) #27 ENSBIXG00005019628 ##11 SLC5A8 (ENSBIXG00005019682) #28 ENSBIXG00005019697 ##11 UTP20 (ENSBIXG00005003225) #29 ARL1 (ENSBIXG00005019884) #30 ENSBIXG00005003254 #31 SPIC (ENSBIXG00005019938) #32 ENSBIXG00005019949 ##14 MYBPC1 (ENSBIXG00005020157) #33 CHPT1 (ENSBIXG00005020232) #34 Cow MODERN SPECIES 24 ENSBTAG00000052520 CFAP54 (ENSBTAG00000015792) #9 NEDD1 (ENSBTAG00000001894) #10 ENSBTAG00000051433 #11 ENSBTAG00000045919 #12 TMPO (ENSBTAG00000004240) ##13 SLC25A3 (ENSBTAG00000012890) #15 IKBIP (ENSBTAG00000021660) #16 APAF1 (ENSBTAG00000021661) #17 ENSBTAG00000030994 #19 ENSBTAG00000025812 ENSBTAG00000013979 #19 ENSBTAG00000048834 BLTP3B (ENSBTAG00000006040) #20 ACTR6 (ENSBTAG00000013842) #21 SCYL2 (ENSBTAG00000013859) #22 SLC17A8 (ENSBTAG00000001088) #23 NR1H4 (ENSBTAG00000013596) #25 GAS2L3 (ENSBTAG00000049308) #26 ANO4 (ENSBTAG00000004145) #27 SLC5A8 (ENSBTAG00000011525) #28 UTP20 (ENSBTAG00000003239) #29 ARL1 (ENSBTAG00000011883) #30 ENSBTAG00000008020 #31 SPIC (ENSBTAG00000009904) #32 MYBPC1 (ENSBTAG00000011392) #33 ENSBTAG00000048643 ##14 CHPT1 (ENSBTAG00000002490) #34 SYCP3 (ENSBTAG00000002492) #35 GNPTAB (ENSBTAG00000019409) #36 DRAM1 (ENSBTAG00000017287) #37 American bison MODERN SPECIES 3373 MTM1 (ENSBBBG00000017063) ENSBBBG00000017018 ENSBBBG00000016958 ENSBBBG00000016945 ENSBBBG00000016934 #13 SLC25A3 (ENSBBBG00000016783) #15 IKBIP (ENSBBBG00000016711) #16 APAF1 (ENSBBBG00000016661) #17 ANKS1B (ENSBBBG00000016259) #19 ENSBBBG00000015782 BLTP3B (ENSBBBG00000015769) #20 ENSBBBG00000015721 #21 SCYL2 (ENSBBBG00000003913) #22 SLC17A8 (ENSBBBG00000015632) #23 NR1H4 (ENSBBBG00000003455) #25 GAS2L3 (ENSBBBG00000015577) #26 ENSBBBG00000003871 Caprinae ANCESTRAL SPECIES ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 #9 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #13 ENSGT00390000008708 #15 ENSGT00500000045001 #16 ENSGT00390000003710.c.a.b.a.b.h ENSGT00940000157710 #17 ENSGT00940000161899.q.a ENSGT00940000154572.`c #19 ENSGT00940000163320 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #29 ENSGT00940000155118.o #30 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Rambouillet Sheep MODERN SPECIES 19 SLC25A3 (ENSOARG00020011479) #15 IKBIP (ENSOARG00020011666) #16 ENSOARG00020011775 APAF1 (ENSOARG00020011843) #17 ENSOARG00020012977 ENSOARG00020013011 #19 ENSOARG00020013132 ENSOARG00020013188 ENSOARG00020013303 ENSOARG00020013344 ENSOARG00020013408 #19 ENSOARG00020013498 BLTP3B (ENSOARG00020013541) #20 ENSOARG00020013878 ACTR6 (ENSOARG00020013903) #21 SCYL2 (ENSOARG00020014106) #22 ENSOARG00020014449 SLC17A8 (ENSOARG00020005092) #23 NR1H4 (ENSOARG00020005198) #25 ENSOARG00020005299 #26 ANO4 (ENSOARG00020005350) #27 SLC5A8 (ENSOARG00020005486) #28 UTP20 (ENSOARG00020005594) #29 ARL1 (ENSOARG00020006041) #30 SPIC (ENSOARG00020006153) #32 MYBPC1 (ENSOARG00020006228) #33 SYCP3 (ENSOARG00020008561) #35 GNPTAB (ENSOARG00020008629) #36 DRAM1 (ENSOARG00020009316) #37 WASHC3 (ENSOARG00020009382) NUP37 (ENSOARG00020009419) Goat MODERN SPECIES 24 ENSCHIG00000011297 #13 SLC25A3 (ENSCHIG00000026853) #15 IKBIP (ENSCHIG00000018224) #16 ENSCHIG00000009665 APAF1 (ENSCHIG00000026050) #17 ENSCHIG00000026522 ENSCHIG00000021672 #19 ENSCHIG00000011860 ENSCHIG00000011894 ENSCHIG00000011002 #19 GARIN6 (ENSCHIG00000026281) ENSCHIG00000020715 #19 ENSCHIG00000014307 BLTP3B (ENSCHIG00000002074) #20 ACTR6 (ENSCHIG00000026128) #21 SCYL2 (ENSCHIG00000022321) #22 SLC17A8 (ENSCHIG00000016996) #23 NR1H4 (ENSCHIG00000020981) #25 GAS2L3 (ENSCHIG00000015539) #26 ANO4 (ENSCHIG00000011611) #27 SLC5A8 (ENSCHIG00000012962) #28 UTP20 (ENSCHIG00000009221) #29 ARL1 (ENSCHIG00000024524) #30 ENSCHIG00000007713 ENSCHIG00000026862 #32 MYBPC1 (ENSCHIG00000026869) #33 CHPT1 (ENSCHIG00000009936) #34 SYCP3 (ENSCHIG00000026071) #35 GNPTAB (ENSCHIG00000024196) #36 DRAM1 (ENSCHIG00000019601) #37 WASHC3 (ENSCHIG00000025652) Siberian musk deer MODERN SPECIES 1256 HAL (ENSMMSG00000024168) LTA4H (ENSMMSG00000024150) ELK3 (ENSMMSG00000024140) #7 CDK17 (ENSMMSG00000024131) #8 ENSMMSG00000024127 ENSMMSG00000024121 NEDD1 (ENSMMSG00000024112) #10 ENSMMSG00000024096 #13 SLC25A3 (ENSMMSG00000024085) #15 ENSMMSG00000024079 #16 APAF1 (ENSMMSG00000024050) #17 ENSMMSG00000024040 ANKS1B (ENSMMSG00000023670) #19 BLTP3B (ENSMMSG00000023582) #20 ACTR6 (ENSMMSG00000023566) #21 SCYL2 (ENSMMSG00000023538) #22 SLC17A8 (ENSMMSG00000023518) #23 NR1H4 (ENSMMSG00000023473) #25 GAS2L3 (ENSMMSG00000023454) #26 ANO4 (ENSMMSG00000023384) #27 SLC5A8 (ENSMMSG00000023355) #28 UTP20 (ENSMMSG00000023336) #29 ENSMMSG00000023322 #30 SPIC (ENSMMSG00000023308) #32 MYBPC1 (ENSMMSG00000022857) #33 CHPT1 (ENSMMSG00000022713) #34 SYCP3 (ENSMMSG00000022696) #35 GNPTAB (ENSMMSG00000022661) #36 DRAM1 (ENSMMSG00000022616) #37 ENSMMSG00000022596 NUP37 (ENSMMSG00000022571) Yarkand deer MODERN SPECIES 14 ELK3 (ENSCHYG00000017527) #7 CDK17 (ENSCHYG00000017640) #8 ENSCHYG00000018145 ##14 CFAP54 (ENSCHYG00000018187) #9 NEDD1 (ENSCHYG00000018895) #10 ENSCHYG00000019199 ENSCHYG00000019270 #13 ENSCHYG00000019480 #15 ENSCHYG00000019744 IKBIP (ENSCHYG00000019783) #16 APAF1 (ENSCHYG00000019906) #17 ANKS1B (ENSCHYG00000020900) #19 ENSCHYG00000022096 BLTP3B (ENSCHYG00000022150) #20 ACTR6 (ENSCHYG00000022511) #21 SCYL2 (ENSCHYG00000022642) #22 SLC17A8 (ENSCHYG00000023010) #23 NR1H4 (ENSCHYG00000023219) #25 GAS2L3 (ENSCHYG00000023599) #26 ANO4 (ENSCHYG00000023758) #27 SLC5A8 (ENSCHYG00000024213) #28 UTP20 (ENSCHYG00000024333) #29 ARL1 (ENSCHYG00000024652) #30 SPIC (ENSCHYG00000024724) #32 MYBPC1 (ENSCHYG00000024823) #33 CHPT1 (ENSCHYG00000025883) #34 SYCP3 (ENSCHYG00000025959) #35 GNPTAB (ENSCHYG00000026007) #36 DRAM1 (ENSCHYG00000026106) #37 ENSCHYG00000026143 ENSCHYG00000026168