Chordata ANCESTRAL SPECIES ENSGT00880000138031 #22 Vertebrata ANCESTRAL SPECIES ENSGT00880000138031 #22 Gnathostomata ANCESTRAL SPECIES 174 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000162483 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00940000159081 ENSGT00390000006088 ENSGT00390000010777 ENSGT00390000014084 ENSGT01030000234578.B.a #37 ENSGT00390000006747 #36 ENSGT00950000183117.a.a #34 ENSGT00940000158254 #33 ENSGT00940000155067 #32 ENSGT00940000155118 #31 Euteleostomi ANCESTRAL SPECIES 49 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000162483 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00940000159081 ENSGT00390000004984 ENSGT00390000006088 ENSGT00390000010777 ENSGT00390000014084 ENSGT01030000234578.B.a #37 ENSGT00390000006747 #36 ENSGT00950000183117.a.a #34 ENSGT00940000158254 #33 ENSGT00940000155067.b ##32 ENSGT00940000155067.a #32 Sarcopterygii ANCESTRAL SPECIES 803 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B Tetrapoda ANCESTRAL SPECIES 5 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Amniota ANCESTRAL SPECIES 5 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Mammalia ANCESTRAL SPECIES 8 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Theria ANCESTRAL SPECIES 2 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Carnivora ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Caniformia ANCESTRAL SPECIES 20 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Canidae ANCESTRAL SPECIES 12 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00910000144211.n.b.d #19 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00390000009819.a.b.a.a.a.a.a.eb.a ENSGT00940000153783.a #8 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708.rb #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00910000144211.n.b.d #19 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000154037.B.ab #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00530000063516.a.a.c.a #28 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Dingo MODERN SPECIES 277 ENSCAFG00020023728 #7 ENSCAFG00020023734 #8 ENSCAFG00020023735 #9 ENSCAFG00020023737 #10 ENSCAFG00020023754 #11 ENSCAFG00020023755 #12 ENSCAFG00020023757 #13 APAF1 (ENSCAFG00020023804) #14 ENSCAFG00020024199 #15 ENSCAFG00020024201 #16 ENSCAFG00020024207 #17 ENSCAFG00020024208 #18 ENSCAFG00020024210 #19 BLTP3B (ENSCAFG00020024212) #20 ACTR6 (ENSCAFG00020024231) #21 SCYL2 (ENSCAFG00020024232) #22 SLC17A8 (ENSCAFG00020024245) #23 NR1H4 (ENSCAFG00020024269) #24 ENSCAFG00020024277 #25 GAS2L3 (ENSCAFG00020024280) #26 ANO4 (ENSCAFG00020024282) #27 ENSCAFG00020024291 #28 SLC5A8 (ENSCAFG00020024296) #29 UTP20 (ENSCAFG00020024305) #30 ARL1 (ENSCAFG00020024333) #31 SPIC (ENSCAFG00020024334) #32 MYBPC1 (ENSCAFG00020024354) #33 CHPT1 (ENSCAFG00020024435) #34 SYCP3 (ENSCAFG00020024465) #35 GNPTAB (ENSCAFG00020024471) #36 DRAM1 (ENSCAFG00020024605) #37 Dog MODERN SPECIES 6 ENSCAFG00845026114 ENSCAFG00845026133 #8 NEDD1 (ENSCAFG00845026200) #10 TMPO (ENSCAFG00845026620) #11 SLC25A3 (ENSCAFG00845026910) ##12 IKBIP (ENSCAFG00845027049) #13 APAF1 (ENSCAFG00845027232) #14 ANKS1B (ENSCAFG00845027643) #18 ENSCAFG00845027984 #17 GARIN6 (ENSCAFG00845005702) ENSCAFG00845005730 #18 ENSCAFG00845005753 #19 BLTP3B (ENSCAFG00845005817) #20 ACTR6 (ENSCAFG00845005922) #21 ENSCAFG00845006004 SCYL2 (ENSCAFG00845006069) #22 SLC17A8 (ENSCAFG00845006328) #23 NR1H4 (ENSCAFG00845006398) #24 ENSCAFG00845006472 #25 GAS2L3 (ENSCAFG00845006511) #26 ANO4 (ENSCAFG00845006701) #27 ENSCAFG00845007104 #28 SLC5A8 (ENSCAFG00845007150) #29 UTP20 (ENSCAFG00845007280) #30 ARL1 (ENSCAFG00845007593) #31 SPIC (ENSCAFG00845007650) #32 MYBPC1 (ENSCAFG00845007866) #33 CHPT1 (ENSCAFG00845008274) #34 GNPTAB (ENSCAFG00845008537) #36 DRAM1 (ENSCAFG00845008892) #37 ENSCAFG00845008937 Red fox MODERN SPECIES 95 CDK17 (ENSVVUG00000018938) CFAP54 (ENSVVUG00000018862) ENSVVUG00000018854 NEDD1 (ENSVVUG00000018845) #10 ENSVVUG00000018822 ENSVVUG00000018771 TMPO (ENSVVUG00000018704) #11 SLC25A3 (ENSVVUG00000018699) #12 IKBIP (ENSVVUG00000018697) #13 APAF1 (ENSVVUG00000018651) #14 ENSVVUG00000018626 ENSVVUG00000018614 #19 ANKS1B (ENSVVUG00000018575) #18 UHRF1BP1L (ENSVVUG00000018560) #20 ACTR6 (ENSVVUG00000018549) #21 SCYL2 (ENSVVUG00000018531) #22 SLC17A8 (ENSVVUG00000018524) #23 NR1H4 (ENSVVUG00000018520) #24 GAS2L3 (ENSVVUG00000018519) #26 ANO4 (ENSVVUG00000018492) #27 ENSVVUG00000018488 SLC5A8 (ENSVVUG00000018468) #29 UTP20 (ENSVVUG00000018110) #30 ARL1 (ENSVVUG00000018044) #31 SPIC (ENSVVUG00000018039) #32 MYBPC1 (ENSVVUG00000018029) #33 CHPT1 (ENSVVUG00000018026) #34 SYCP3 (ENSVVUG00000018021) #35 GNPTAB (ENSVVUG00000018000) #36 DRAM1 (ENSVVUG00000017987) #37 ENSVVUG00000017981 Caniformia_b ANCESTRAL SPECIES 18 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Ursidae ANCESTRAL SPECIES 13 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708.pb.b #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Ursus ANCESTRAL SPECIES 29 ENSGT00980000198967.a ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Polar bear MODERN SPECIES 280 ENSUMAG00000002145 #18 ENSUMAG00000002140 BLTP3B (ENSUMAG00000001697) #20 ACTR6 (ENSUMAG00000001633) #21 SCYL2 (ENSUMAG00000001610) #22 SLC17A8 (ENSUMAG00000001536) #23 NR1H4 (ENSUMAG00000001422) #24 GAS2L3 (ENSUMAG00000001346) #26 ANO4 (ENSUMAG00000001262) #27 SLC5A8 (ENSUMAG00000001198) #29 UTP20 (ENSUMAG00000000077) #30 ARL1 (ENSUMAG00000019547) #31 SPIC (ENSUMAG00000019543) #32 MYBPC1 (ENSUMAG00000019327) #33 CHPT1 (ENSUMAG00000019237) #34 SYCP3 (ENSUMAG00000019227) #35 GNPTAB (ENSUMAG00000019219) #36 DRAM1 (ENSUMAG00000019216) #37 WASHC3 (ENSUMAG00000019210) NUP37 (ENSUMAG00000019205) American black bear MODERN SPECIES 3401 SCYL2 (ENSUAMG00000027517) #22 SLC17A8 (ENSUAMG00000027626) #23 NR1H4 (ENSUAMG00000027627) #24 GAS2L3 (ENSUAMG00000027628) #26 Giant Panda MODERN SPECIES 6 HAL (ENSAMEG00000002098) LTA4H (ENSAMEG00000002029) ELK3 (ENSAMEG00000026087) CDK17 (ENSAMEG00000001927) ENSAMEG00000025825 CFAP54 (ENSAMEG00000024197) NEDD1 (ENSAMEG00000004999) #10 ENSAMEG00000010691 #11 SLC25A3 (ENSAMEG00000010735) #12 IKBIP (ENSAMEG00000010756) #13 APAF1 (ENSAMEG00000010759) #14 ENSAMEG00000010821 #18 GARIN6 (ENSAMEG00000029798) BLTP3B (ENSAMEG00000001959) #20 ACTR6 (ENSAMEG00000015315) #21 SCYL2 (ENSAMEG00000015298) #22 SLC17A8 (ENSAMEG00000015266) #23 NR1H4 (ENSAMEG00000015232) #24 GAS2L3 (ENSAMEG00000015215) #26 ANO4 (ENSAMEG00000000600) #27 SLC5A8 (ENSAMEG00000016399) #29 UTP20 (ENSAMEG00000016416) #30 ARL1 (ENSAMEG00000016452) #31 SPIC (ENSAMEG00000028961) #32 MYBPC1 (ENSAMEG00000016466) #33 CHPT1 (ENSAMEG00000016549) #34 SYCP3 (ENSAMEG00000016551) #35 GNPTAB (ENSAMEG00000016554) #36 DRAM1 (ENSAMEG00000006305) #37 NUP37 (ENSAMEG00000006338) PARPBP (ENSAMEG00000006369) Mustelinae ANCESTRAL SPECIES 4 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.i #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Ferret MODERN SPECIES 171 TMPO (ENSMPUG00000011379) ##11 SLC25A3 (ENSMPUG00000011387) #12 ENSMPUG00000011443 #13 APAF1 (ENSMPUG00000011447) #14 ENSMPUG00000011453 #18 ENSMPUG00000011491 #18 GARIN6 (ENSMPUG00000011498) BLTP3B (ENSMPUG00000011501) #20 ACTR6 (ENSMPUG00000011507) #21 SCYL2 (ENSMPUG00000011551) #22 SLC17A8 (ENSMPUG00000011560) #23 NR1H4 (ENSMPUG00000011573) #24 GAS2L3 (ENSMPUG00000011580) #26 ENSMPUG00000011612 ANO4 (ENSMPUG00000011618) #27 SLC5A8 (ENSMPUG00000011632) #29 UTP20 (ENSMPUG00000011641) #30 ARL1 (ENSMPUG00000011822) #31 SPIC (ENSMPUG00000011857) #32 MYBPC1 (ENSMPUG00000011862) #33 CHPT1 (ENSMPUG00000011874) #34 GNPTAB (ENSMPUG00000011877) #36 DRAM1 (ENSMPUG00000011890) #37 WASHC3 (ENSMPUG00000011893) NUP37 (ENSMPUG00000011898) American mink MODERN SPECIES 20 ELK3 (ENSNVIG00000008034) CDK17 (ENSNVIG00000008059) ENSNVIG00000008171 #7 ENSNVIG00000008188 NEDD1 (ENSNVIG00000008215) #10 ENSNVIG00000008275 ENSNVIG00000008369 #11 SLC25A3 (ENSNVIG00000008484) #12 IKBIP (ENSNVIG00000008542) #13 ENSNVIG00000008570 #14 ENSNVIG00000008653 #18 GARIN6 (ENSNVIG00000008922) ENSNVIG00000008928 #18 BLTP3B (ENSNVIG00000008957) #20 ACTR6 (ENSNVIG00000009003) #21 SCYL2 (ENSNVIG00000009103) #22 SLC17A8 (ENSNVIG00000009152) #23 NR1H4 (ENSNVIG00000009191) #24 GAS2L3 (ENSNVIG00000009253) #26 ENSNVIG00000009266 ANO4 (ENSNVIG00000009287) #27 SLC5A8 (ENSNVIG00000009429) #29 UTP20 (ENSNVIG00000009480) #30 ARL1 (ENSNVIG00000009572) #31 SPIC (ENSNVIG00000009598) #32 MYBPC1 (ENSNVIG00000009645) #33 CHPT1 (ENSNVIG00000010091) #34 ENSNVIG00000010099 #35 GNPTAB (ENSNVIG00000010138) #36 DRAM1 (ENSNVIG00000010221) #37 WASHC3 (ENSNVIG00000010251) Felidae ANCESTRAL SPECIES 2 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Panthera ANCESTRAL SPECIES ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00910000144211.n.b #19 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 lion MODERN SPECIES 7 HAL (ENSPLOG00000012331) LTA4H (ENSPLOG00000012778) ELK3 (ENSPLOG00000013162) CDK17 (ENSPLOG00000013254) CFAP54 (ENSPLOG00000013406) NEDD1 (ENSPLOG00000013460) #10 ENSPLOG00000013590 #11 SLC25A3 (ENSPLOG00000013735) #12 IKBIP (ENSPLOG00000013888) #13 APAF1 (ENSPLOG00000013981) #14 ENSPLOG00000014281 #18 GARIN6 (ENSPLOG00000015188) ENSPLOG00000015233 #18 BLTP3B (ENSPLOG00000015400) #20 ACTR6 (ENSPLOG00000015509) #21 SCYL2 (ENSPLOG00000015630) #22 SLC17A8 (ENSPLOG00000015751) #23 NR1H4 (ENSPLOG00000015968) #24 GAS2L3 (ENSPLOG00000016298) #26 ANO4 (ENSPLOG00000016494) #27 SLC5A8 (ENSPLOG00000017103) #29 UTP20 (ENSPLOG00000017260) #30 ARL1 (ENSPLOG00000017729) #31 SPIC (ENSPLOG00000017845) #32 MYBPC1 (ENSPLOG00000018049) #33 CHPT1 (ENSPLOG00000019674) #34 SYCP3 (ENSPLOG00000019730) #35 GNPTAB (ENSPLOG00000019819) #36 ENSPLOG00000019950 #37 WASHC3 (ENSPLOG00000020005) NUP37 (ENSPLOG00000020039) leopard MODERN SPECIES 13 HAL (ENSPPRG00000004514) LTA4H (ENSPPRG00000001567) ELK3 (ENSPPRG00000000266) CDK17 (ENSPPRG00000022789) CFAP54 (ENSPPRG00000018732) NEDD1 (ENSPPRG00000011575) #10 ENSPPRG00000007580 #11 SLC25A3 (ENSPPRG00000005899) #12 IKBIP (ENSPPRG00000003826) #13 APAF1 (ENSPPRG00000003220) #14 ENSPPRG00000018210 #18 GARIN6 (ENSPPRG00000011321) ENSPPRG00000010804 #18 BLTP3B (ENSPPRG00000009836) #20 ACTR6 (ENSPPRG00000008867) #21 SCYL2 (ENSPPRG00000007538) #22 SLC17A8 (ENSPPRG00000006251) #23 NR1H4 (ENSPPRG00000004482) #24 GAS2L3 (ENSPPRG00000003634) #26 ANO4 (ENSPPRG00000003419) #27 SLC5A8 (ENSPPRG00000001967) #29 ENSPPRG00000001800 UTP20 (ENSPPRG00000001026) #30 ARL1 (ENSPPRG00000023908) #31 SPIC (ENSPPRG00000018294) #32 MYBPC1 (ENSPPRG00000015376) #33 CHPT1 (ENSPPRG00000005602) #34 SYCP3 (ENSPPRG00000005146) #35 GNPTAB (ENSPPRG00000004479) #36 DRAM1 (ENSPPRG00000002977) #37 WASHC3 (ENSPPRG00000002578) Tiger MODERN SPECIES 229 LTA4H (ENSPTIG00000014149) ELK3 (ENSPTIG00000015155) CDK17 (ENSPTIG00000016038) CFAP54 (ENSPTIG00000018945) NEDD1 (ENSPTIG00000021449) #10 ENSPTIG00000008730 #11 SLC25A3 (ENSPTIG00000011200) #12 IKBIP (ENSPTIG00000015567) #13 APAF1 (ENSPTIG00000016200) #14 ENSPTIG00000021952 #18 GARIN6 (ENSPTIG00000006653) ENSPTIG00000006936 #18 ENSPTIG00000007650 #19 BLTP3B (ENSPTIG00000009469) #20 ACTR6 (ENSPTIG00000012245) #21 SCYL2 (ENSPTIG00000013119) #22 SLC17A8 (ENSPTIG00000014917) #23 NR1H4 (ENSPTIG00000016103) #24 GAS2L3 (ENSPTIG00000017778) #26 ANO4 (ENSPTIG00000018267) #27 SLC5A8 (ENSPTIG00000020155) #29 UTP20 (ENSPTIG00000020972) #30 ENSPTIG00000002154 #31 SPIC (ENSPTIG00000002890) #32 MYBPC1 (ENSPTIG00000005437) #33 CHPT1 (ENSPTIG00000010811) #34 SYCP3 (ENSPTIG00000011557) #35 GNPTAB (ENSPTIG00000012080) #36 DRAM1 (ENSPTIG00000013781) #37 WASHC3 (ENSPTIG00000014177) NUP37 (ENSPTIG00000014283) Cat MODERN SPECIES 238 HAL (ENSFCAG00000005407) LTA4H (ENSFCAG00000018521) ELK3 (ENSFCAG00000010747) CDK17 (ENSFCAG00000027060) CFAP54 (ENSFCAG00000011027) NEDD1 (ENSFCAG00000031627) #10 TMPO (ENSFCAG00000030306) #11 SLC25A3 (ENSFCAG00000027994) #12 IKBIP (ENSFCAG00000040544) #13 APAF1 (ENSFCAG00000010807) #14 ANKS1B (ENSFCAG00000040012) #18 ENSFCAG00000049184 GARIN6 (ENSFCAG00000027306) BLTP3B (ENSFCAG00000004669) #20 ACTR6 (ENSFCAG00000025056) #21 SCYL2 (ENSFCAG00000028913) #22 SLC17A8 (ENSFCAG00000018638) #23 NR1H4 (ENSFCAG00000006469) #24 GAS2L3 (ENSFCAG00000023152) #26 ANO4 (ENSFCAG00000006147) #27 SLC5A8 (ENSFCAG00000031580) #29 UTP20 (ENSFCAG00000006150) #30 ARL1 (ENSFCAG00000030871) #31 SPIC (ENSFCAG00000034240) #32 MYBPC1 (ENSFCAG00000025799) #33 GNPTAB (ENSFCAG00000008281) #36 CHPT1 (ENSFCAG00000030275) #34 SYCP3 (ENSFCAG00000024568) #35 ENSFCAG00000041340 #37 WASHC3 (ENSFCAG00000019358) NUP37 (ENSFCAG00000032244) Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Equus ANCESTRAL SPECIES 21 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a.s #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747.j #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Horse MODERN SPECIES 20 LTA4H (ENSECAG00000008767) ENSECAG00000045733 ELK3 (ENSECAG00000017760) CDK17 (ENSECAG00000021679) CFAP54 (ENSECAG00000009697) NEDD1 (ENSECAG00000013725) #10 TMPO (ENSECAG00000023461) #11 IKBIP (ENSECAG00000024371) #13 SLC25A3 (ENSECAG00000056021) #12 APAF1 (ENSECAG00000024703) #14 ANKS1B (ENSECAG00000011449) #18 ENSECAG00000056139 BLTP3B (ENSECAG00000002701) #20 ACTR6 (ENSECAG00000017041) #21 DEPDC4 (ENSECAG00000019501) SCYL2 (ENSECAG00000022066) #22 SLC17A8 (ENSECAG00000013826) #23 NR1H4 (ENSECAG00000018166) #24 GAS2L3 (ENSECAG00000010371) #26 ANO4 (ENSECAG00000013480) #27 SLC5A8 (ENSECAG00000013230) #29 UTP20 (ENSECAG00000006876) #30 ARL1 (ENSECAG00000000372) #31 ENSECAG00000009614 #32 MYBPC1 (ENSECAG00000008625) #33 ENSECAG00000048628 CHPT1 (ENSECAG00000019000) #34 SYCP3 (ENSECAG00000023735) #35 GNPTAB (ENSECAG00000010682) #36 DRAM1 (ENSECAG00000008759) #37 WASHC3 (ENSECAG00000013045) Donkey MODERN SPECIES 11 HAL (ENSEASG00005019524) LTA4H (ENSEASG00005019525) ENSEASG00005019526 ELK3 (ENSEASG00005019530) CDK17 (ENSEASG00005019532) CFAP54 (ENSEASG00005019535) NEDD1 (ENSEASG00005019539) #10 ENSEASG00005019557 #11 SLC25A3 (ENSEASG00005019560) #12 IKBIP (ENSEASG00005019570) #13 APAF1 (ENSEASG00005019574) #14 ANKS1B (ENSEASG00005019623) #18 BLTP3B (ENSEASG00005019907) #20 ACTR6 (ENSEASG00005019911) #21 DEPDC4 (ENSEASG00005019914) SCYL2 (ENSEASG00005019917) #22 SLC17A8 (ENSEASG00005019921) #23 NR1H4 (ENSEASG00005019928) #24 GAS2L3 (ENSEASG00005033350) #26 ANO4 (ENSEASG00005019948) #27 SLC5A8 (ENSEASG00005019961) #29 UTP20 (ENSEASG00005019981) #30 ARL1 (ENSEASG00005020057) #31 SPIC (ENSEASG00005038574) #32 MYBPC1 (ENSEASG00005020089) #33 CHPT1 (ENSEASG00005020112) #34 SYCP3 (ENSEASG00005020115) #35 ENSEASG00005020118 #36 ENSEASG00005027099 #36 ENSEASG00005020130 #37 WASHC3 (ENSEASG00005020138) Chiroptera ANCESTRAL SPECIES 23 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00940000154098.a.c ##11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Microchiroptera ANCESTRAL SPECIES 8 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00940000154098.a.c ##11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Greater horseshoe bat MODERN SPECIES 1 LTA4H (ENSRFEG00010019582) ELK3 (ENSRFEG00010019517) CDK17 (ENSRFEG00010019452) CFAP54 (ENSRFEG00010018994) NEDD1 (ENSRFEG00010018827) #10 ENSRFEG00010018650 #11 ENSRFEG00010018608 #12 ENSRFEG00010018576 APAF1 (ENSRFEG00010018386) #14 ENSRFEG00010018331 ENSRFEG00010018324 ANKS1B (ENSRFEG00010017872) #18 ENSRFEG00010017816 BLTP3B (ENSRFEG00010017660) #20 ACTR6 (ENSRFEG00010017580) #21 SCYL2 (ENSRFEG00010017358) #22 SLC17A8 (ENSRFEG00010017004) #23 NR1H4 (ENSRFEG00010016901) #24 GAS2L3 (ENSRFEG00010016827) #26 ANO4 (ENSRFEG00010016021) #27 SLC5A8 (ENSRFEG00010015766) #29 UTP20 (ENSRFEG00010015715) #30 ARL1 (ENSRFEG00010015513) #31 ENSRFEG00010015420 #32 MYBPC1 (ENSRFEG00010013747) #33 CHPT1 (ENSRFEG00010013493) #34 SYCP3 (ENSRFEG00010013361) #35 GNPTAB (ENSRFEG00010013250) #36 DRAM1 (ENSRFEG00010013161) #37 WASHC3 (ENSRFEG00010013087) NUP37 (ENSRFEG00010013013) Microbat MODERN SPECIES 947 ELK3 (ENSMLUG00000002400) ENSMLUG00000024585 CDK17 (ENSMLUG00000002405) ENSMLUG00000002415 #7 ENSMLUG00000011945 NEDD1 (ENSMLUG00000001626) #10 TMPO (ENSMLUG00000000074) ##11 SLC25A3 (ENSMLUG00000008330) #12 ENSMLUG00000008339 #13 APAF1 (ENSMLUG00000008348) #14 ENSMLUG00000025382 #18 ENSMLUG00000008394 #18 ENSMLUG00000016072 #20 ACTR6 (ENSMLUG00000022723) #21 ENSMLUG00000009190 SCYL2 (ENSMLUG00000009220) #22 SLC17A8 (ENSMLUG00000009254) #23 NR1H4 (ENSMLUG00000009273) #24 GAS2L3 (ENSMLUG00000004905) #26 ANO4 (ENSMLUG00000013562) #27 SLC5A8 (ENSMLUG00000013581) #29 UTP20 (ENSMLUG00000002313) #30 ENSMLUG00000002351 #31 SPIC (ENSMLUG00000011052) #32 MYBPC1 (ENSMLUG00000010644) #33 CHPT1 (ENSMLUG00000010695) #34 SYCP3 (ENSMLUG00000010711) #35 GNPTAB (ENSMLUG00000000385) #36 DRAM1 (ENSMLUG00000000393) #37 WASHC3 (ENSMLUG00000000401) NUP37 (ENSMLUG00000000405) Megabat MODERN SPECIES 6953 SCYL2 (ENSPVAG00000015744) #22 SLC17A8 (ENSPVAG00000015746) #23 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Suina ANCESTRAL SPECIES 4 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Chacoan peccary MODERN SPECIES 873 CCDC38 (ENSCWAG00000017292) AMDHD1 (ENSCWAG00000017397) HAL (ENSCWAG00000017480) LTA4H (ENSCWAG00000011298) ELK3 (ENSCWAG00000011586) CDK17 (ENSCWAG00000011649) CFAP54 (ENSCWAG00000011753) NEDD1 (ENSCWAG00000012318) #10 ENSCWAG00000012509 #11 SLC25A3 (ENSCWAG00000012689) #12 IKBIP (ENSCWAG00000012749) #13 APAF1 (ENSCWAG00000012901) #14 ANKS1B (ENSCWAG00000014719) #18 BLTP3B (ENSCWAG00000018723) #20 ACTR6 (ENSCWAG00000018845) #21 SCYL2 (ENSCWAG00000018942) #22 SLC17A8 (ENSCWAG00000019025) #23 NR1H4 (ENSCWAG00000019166) #24 ENSCWAG00000019350 #26 ENSCWAG00000019369 #26 ANO4 (ENSCWAG00000019430) #27 SLC5A8 (ENSCWAG00000019771) #29 UTP20 (ENSCWAG00000019835) #30 ARL1 (ENSCWAG00000019875) #31 SPIC (ENSCWAG00000019944) #32 MYBPC1 (ENSCWAG00000020041) #33 CHPT1 (ENSCWAG00000020929) #34 SYCP3 (ENSCWAG00000020953) #35 GNPTAB (ENSCWAG00000020989) #36 ENSCWAG00000021041 DRAM1 (ENSCWAG00000021049) #37 Pig MODERN SPECIES 13 CDK17 (ENSSSCG00000028182) ENSSSCG00000050899 CFAP54 (ENSSSCG00000033574) NEDD1 (ENSSSCG00000000890) #10 ENSSSCG00000036349 TMPO (ENSSSCG00000038487) #11 SLC25A3 (ENSSSCG00000000886) #12 IKBIP (ENSSSCG00000038772) #13 APAF1 (ENSSSCG00000000884) #14 ENSSSCG00000050703 ENSSSCG00000000883 ENSSSCG00000050712 ANKS1B (ENSSSCG00000022083) #18 BLTP3B (ENSSSCG00000026697) #20 ACTR6 (ENSSSCG00000025682) #21 SCYL2 (ENSSSCG00000000877) #22 SLC17A8 (ENSSSCG00000038946) #23 NR1H4 (ENSSSCG00000000875) #24 GAS2L3 (ENSSSCG00000000874) #26 ANO4 (ENSSSCG00000000873) #27 SLC5A8 (ENSSSCG00000000871) #29 ENSSSCG00000047368 UTP20 (ENSSSCG00000000869) #30 ARL1 (ENSSSCG00000000870) #31 SPIC (ENSSSCG00000000867) #32 ENSSSCG00000054653 MYBPC1 (ENSSSCG00000000866) #33 CHPT1 (ENSSSCG00000000864) #34 SYCP3 (ENSSSCG00000000863) #35 GNPTAB (ENSSSCG00000000862) #36 DRAM1 (ENSSSCG00000023972) #37 Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Pecora ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Yarkand deer MODERN SPECIES 14 ELK3 (ENSCHYG00000017527) CDK17 (ENSCHYG00000017640) ENSCHYG00000018145 CFAP54 (ENSCHYG00000018187) NEDD1 (ENSCHYG00000018895) #10 ENSCHYG00000019199 ENSCHYG00000019270 #11 ENSCHYG00000019480 #12 ENSCHYG00000019744 IKBIP (ENSCHYG00000019783) #13 APAF1 (ENSCHYG00000019906) #14 ANKS1B (ENSCHYG00000020900) #18 ENSCHYG00000022096 BLTP3B (ENSCHYG00000022150) #20 ACTR6 (ENSCHYG00000022511) #21 SCYL2 (ENSCHYG00000022642) #22 SLC17A8 (ENSCHYG00000023010) #23 NR1H4 (ENSCHYG00000023219) #24 GAS2L3 (ENSCHYG00000023599) #26 ANO4 (ENSCHYG00000023758) #27 SLC5A8 (ENSCHYG00000024213) #29 UTP20 (ENSCHYG00000024333) #30 ARL1 (ENSCHYG00000024652) #31 SPIC (ENSCHYG00000024724) #32 MYBPC1 (ENSCHYG00000024823) #33 CHPT1 (ENSCHYG00000025883) #34 SYCP3 (ENSCHYG00000025959) #35 GNPTAB (ENSCHYG00000026007) #36 DRAM1 (ENSCHYG00000026106) #37 ENSCHYG00000026143 ENSCHYG00000026168 Percora_a ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Bovidae ANCESTRAL SPECIES 3 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Bovinae ANCESTRAL SPECIES 10 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Bos ANCESTRAL SPECIES 2 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000154572.`c #18 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Bos_b ANCESTRAL SPECIES 22 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000154572.`c #18 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Hybrid Bos Indicus MODERN SPECIES 24 CDK17 (ENSBIXG00005002870) CFAP54 (ENSBIXG00005017724) ENSBIXG00005017766 NEDD1 (ENSBIXG00005017834) #10 ENSBIXG00005005430 #11 SLC25A3 (ENSBIXG00005005592) #12 IKBIP (ENSBIXG00005018134) #13 APAF1 (ENSBIXG00005018257) #14 ENSBIXG00005018298 ENSBIXG00005018300 ENSBIXG00005002963 ANKS1B (ENSBIXG00005018683) #18 ENSBIXG00005018751 BLTP3B (ENSBIXG00005018834) #20 ACTR6 (ENSBIXG00005018932) #21 SCYL2 (ENSBIXG00005019128) #22 SLC17A8 (ENSBIXG00005019172) #23 NR1H4 (ENSBIXG00005019293) #24 GAS2L3 (ENSBIXG00005019358) #26 ENSBIXG00005003144 ANO4 (ENSBIXG00005003189) #27 ENSBIXG00005019628 SLC5A8 (ENSBIXG00005019682) #29 ENSBIXG00005019697 UTP20 (ENSBIXG00005003225) #30 ARL1 (ENSBIXG00005019884) #31 ENSBIXG00005003254 SPIC (ENSBIXG00005019938) #32 ENSBIXG00005019949 MYBPC1 (ENSBIXG00005020157) #33 CHPT1 (ENSBIXG00005020232) #34 Cow MODERN SPECIES 24 ENSBTAG00000052520 CFAP54 (ENSBTAG00000015792) NEDD1 (ENSBTAG00000001894) #10 ENSBTAG00000051433 ENSBTAG00000045919 TMPO (ENSBTAG00000004240) ##11 SLC25A3 (ENSBTAG00000012890) #12 IKBIP (ENSBTAG00000021660) #13 APAF1 (ENSBTAG00000021661) #14 ENSBTAG00000030994 #18 ENSBTAG00000025812 ENSBTAG00000013979 #18 ENSBTAG00000048834 BLTP3B (ENSBTAG00000006040) #20 ACTR6 (ENSBTAG00000013842) #21 SCYL2 (ENSBTAG00000013859) #22 SLC17A8 (ENSBTAG00000001088) #23 NR1H4 (ENSBTAG00000013596) #24 GAS2L3 (ENSBTAG00000049308) #26 ANO4 (ENSBTAG00000004145) #27 SLC5A8 (ENSBTAG00000011525) #29 UTP20 (ENSBTAG00000003239) #30 ARL1 (ENSBTAG00000011883) #31 ENSBTAG00000008020 SPIC (ENSBTAG00000009904) #32 MYBPC1 (ENSBTAG00000011392) #33 ENSBTAG00000048643 CHPT1 (ENSBTAG00000002490) #34 SYCP3 (ENSBTAG00000002492) #35 GNPTAB (ENSBTAG00000019409) #36 DRAM1 (ENSBTAG00000017287) #37 Bos_a ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00870000136537.j Domestic yak MODERN SPECIES 24 ELK3 (ENSBGRG00000006178) CDK17 (ENSBGRG00000005998) CFAP54 (ENSBGRG00000005654) NEDD1 (ENSBGRG00000005492) #10 ENSBGRG00000005471 ENSBGRG00000005452 ENSBGRG00000005328 #11 ENSBGRG00000005289 SLC25A3 (ENSBGRG00000005230) #12 IKBIP (ENSBGRG00000005194) #13 APAF1 (ENSBGRG00000004769) #14 ENSBGRG00000004690 ANKS1B (ENSBGRG00000003686) #18 BLTP3B (ENSBGRG00000003515) #20 ENSBGRG00000003369 #21 SCYL2 (ENSBGRG00000003248) #22 SLC17A8 (ENSBGRG00000003178) #23 ENSBGRG00000003155 NR1H4 (ENSBGRG00000003123) #24 GAS2L3 (ENSBGRG00000003088) #26 ANO4 (ENSBGRG00000002904) #27 SLC5A8 (ENSBGRG00000002819) #29 UTP20 (ENSBGRG00000002781) #30 ARL1 (ENSBGRG00000002671) #31 ENSBGRG00000002653 ENSBGRG00000002632 #32 MYBPC1 (ENSBGRG00000001036) #33 CHPT1 (ENSBGRG00000000795) #34 SYCP3 (ENSBGRG00000000767) #35 GNPTAB (ENSBGRG00000000629) #36 DRAM1 (ENSBGRG00000000571) #37 Wild yak MODERN SPECIES 254 ANKS1B (ENSBMUG00000024131) #18 ENSBMUG00000024142 BLTP3B (ENSBMUG00000024161) #20 ENSBMUG00000024199 #21 SCYL2 (ENSBMUG00000024260) #22 SLC17A8 (ENSBMUG00000024293) #23 NR1H4 (ENSBMUG00000024339) #24 ENSBMUG00000024355 #26 ENSBMUG00000024358 #26 ENSBMUG00000024366 American bison MODERN SPECIES 3373 MTM1 (ENSBBBG00000017063) ENSBBBG00000017018 ENSBBBG00000016958 ENSBBBG00000016945 ENSBBBG00000016934 #11 SLC25A3 (ENSBBBG00000016783) #12 IKBIP (ENSBBBG00000016711) #13 APAF1 (ENSBBBG00000016661) #14 ANKS1B (ENSBBBG00000016259) #18 ENSBBBG00000015782 BLTP3B (ENSBBBG00000015769) #20 ENSBBBG00000015721 #21 SCYL2 (ENSBBBG00000003913) #22 SLC17A8 (ENSBBBG00000015632) #23 NR1H4 (ENSBBBG00000003455) #24 GAS2L3 (ENSBBBG00000015577) #26 ENSBBBG00000003871 Caprinae ANCESTRAL SPECIES ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00390000003710.c.a.b.a.b.h ENSGT00940000157710 #14 ENSGT00940000161899.q.a ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00940000170157 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z ENSGT00390000010777 Rambouillet Sheep MODERN SPECIES 19 SLC25A3 (ENSOARG00020011479) #12 IKBIP (ENSOARG00020011666) #13 ENSOARG00020011775 APAF1 (ENSOARG00020011843) #14 ENSOARG00020012977 ENSOARG00020013011 #18 ENSOARG00020013132 ENSOARG00020013188 ENSOARG00020013303 ENSOARG00020013344 ENSOARG00020013408 #18 ENSOARG00020013498 BLTP3B (ENSOARG00020013541) #20 ENSOARG00020013878 ACTR6 (ENSOARG00020013903) #21 SCYL2 (ENSOARG00020014106) #22 ENSOARG00020014449 SLC17A8 (ENSOARG00020005092) #23 NR1H4 (ENSOARG00020005198) #24 ENSOARG00020005299 #26 ANO4 (ENSOARG00020005350) #27 SLC5A8 (ENSOARG00020005486) #29 UTP20 (ENSOARG00020005594) #30 ARL1 (ENSOARG00020006041) #31 SPIC (ENSOARG00020006153) #32 MYBPC1 (ENSOARG00020006228) #33 SYCP3 (ENSOARG00020008561) #35 GNPTAB (ENSOARG00020008629) #36 DRAM1 (ENSOARG00020009316) #37 WASHC3 (ENSOARG00020009382) NUP37 (ENSOARG00020009419) Goat MODERN SPECIES 24 ENSCHIG00000011297 #11 SLC25A3 (ENSCHIG00000026853) #12 IKBIP (ENSCHIG00000018224) #13 ENSCHIG00000009665 APAF1 (ENSCHIG00000026050) #14 ENSCHIG00000026522 ENSCHIG00000021672 #18 ENSCHIG00000011860 ENSCHIG00000011894 ENSCHIG00000011002 #18 GARIN6 (ENSCHIG00000026281) ENSCHIG00000020715 #18 ENSCHIG00000014307 BLTP3B (ENSCHIG00000002074) #20 ACTR6 (ENSCHIG00000026128) #21 SCYL2 (ENSCHIG00000022321) #22 SLC17A8 (ENSCHIG00000016996) #23 NR1H4 (ENSCHIG00000020981) #24 GAS2L3 (ENSCHIG00000015539) #26 ANO4 (ENSCHIG00000011611) #27 SLC5A8 (ENSCHIG00000012962) #29 UTP20 (ENSCHIG00000009221) #30 ARL1 (ENSCHIG00000024524) #31 ENSCHIG00000007713 ENSCHIG00000026862 #32 MYBPC1 (ENSCHIG00000026869) #33 CHPT1 (ENSCHIG00000009936) #34 SYCP3 (ENSCHIG00000026071) #35 GNPTAB (ENSCHIG00000024196) #36 DRAM1 (ENSCHIG00000019601) #37 WASHC3 (ENSCHIG00000025652) Siberian musk deer MODERN SPECIES 1256 HAL (ENSMMSG00000024168) LTA4H (ENSMMSG00000024150) ELK3 (ENSMMSG00000024140) CDK17 (ENSMMSG00000024131) ENSMMSG00000024127 #7 ENSMMSG00000024121 NEDD1 (ENSMMSG00000024112) #10 ENSMMSG00000024096 #11 SLC25A3 (ENSMMSG00000024085) #12 ENSMMSG00000024079 #13 APAF1 (ENSMMSG00000024050) #14 ENSMMSG00000024040 ANKS1B (ENSMMSG00000023670) #18 BLTP3B (ENSMMSG00000023582) #20 ACTR6 (ENSMMSG00000023566) #21 SCYL2 (ENSMMSG00000023538) #22 SLC17A8 (ENSMMSG00000023518) #23 NR1H4 (ENSMMSG00000023473) #24 GAS2L3 (ENSMMSG00000023454) #26 ANO4 (ENSMMSG00000023384) #27 SLC5A8 (ENSMMSG00000023355) #29 UTP20 (ENSMMSG00000023336) #30 ENSMMSG00000023322 #31 SPIC (ENSMMSG00000023308) #32 MYBPC1 (ENSMMSG00000022857) #33 CHPT1 (ENSMMSG00000022713) #34 SYCP3 (ENSMMSG00000022696) #35 GNPTAB (ENSMMSG00000022661) #36 DRAM1 (ENSMMSG00000022616) #37 ENSMMSG00000022596 NUP37 (ENSMMSG00000022571) Cetacea ANCESTRAL SPECIES 8 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00390000003526.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 ENSGT00390000006088 Odontoceti ANCESTRAL SPECIES 7 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00390000003526.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.ab.a ENSGT00390000010777 Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00940000154098.a.c ##11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.ab.a ENSGT00390000010777 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT01060000248806.a.a ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.`b ENSGT00390000010777 Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00940000154098.a.c ##11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT01060000248806.a.a ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o.a.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.ab.a ENSGT00390000010777 Beluga whale MODERN SPECIES 45 CDK17 (ENSDLEG00000011309) CFAP54 (ENSDLEG00000011364) NEDD1 (ENSDLEG00000011471) #10 TMPO (ENSDLEG00000011539) ##11 SLC25A3 (ENSDLEG00000011582) #12 IKBIP (ENSDLEG00000011613) #13 APAF1 (ENSDLEG00000011640) #14 ENSDLEG00000011766 ##18 ENSDLEG00000011773 ##18 ENSDLEG00000011784 ENSDLEG00000011790 #18 GARIN6 (ENSDLEG00000011803) ENSDLEG00000011815 BLTP3B (ENSDLEG00000011825) #20 ACTR6 (ENSDLEG00000011851) #21 SCYL2 (ENSDLEG00000011872) #22 SLC17A8 (ENSDLEG00000011936) #23 NR1H4 (ENSDLEG00000011975) #24 GAS2L3 (ENSDLEG00000012028) #26 ANO4 (ENSDLEG00000012044) #27 SLC5A8 (ENSDLEG00000012140) #29 UTP20 (ENSDLEG00000012184) #30 ENSDLEG00000012234 #31 SPIC (ENSDLEG00000012245) #32 MYBPC1 (ENSDLEG00000012290) #33 CHPT1 (ENSDLEG00000012562) #34 SYCP3 (ENSDLEG00000012574) #35 GNPTAB (ENSDLEG00000012595) #36 ENSDLEG00000012682 #37 ENSDLEG00000012694 NUP37 (ENSDLEG00000012705) Narwhal MODERN SPECIES 313 LTA4H (ENSMMNG00015013417) ELK3 (ENSMMNG00015013477) CDK17 (ENSMMNG00015013496) CFAP54 (ENSMMNG00015013547) NEDD1 (ENSMMNG00015013645) #10 ENSMMNG00015013740 #11 SLC25A3 (ENSMMNG00015013779) #12 IKBIP (ENSMMNG00015013856) #13 APAF1 (ENSMMNG00015013879) #14 ANKS1B (ENSMMNG00015014074) #18 ENSMMNG00015014315 GARIN6 (ENSMMNG00015014319) ENSMMNG00015014334 BLTP3B (ENSMMNG00015014349) #20 ACTR6 (ENSMMNG00015014364) #21 SCYL2 (ENSMMNG00015014414) #22 SLC17A8 (ENSMMNG00015014449) #23 NR1H4 (ENSMMNG00015014507) #24 GAS2L3 (ENSMMNG00015014544) #26 ANO4 (ENSMMNG00015014593) #27 SLC5A8 (ENSMMNG00015014687) #29 UTP20 (ENSMMNG00015014730) #30 ENSMMNG00015014764 SPIC (ENSMMNG00015014772) #32 MYBPC1 (ENSMMNG00015014938) #33 CHPT1 (ENSMMNG00015015187) #34 SYCP3 (ENSMMNG00015015206) #35 GNPTAB (ENSMMNG00015015244) #36 DRAM1 (ENSMMNG00015015327) #37 ENSMMNG00015015348 NUP37 (ENSMMNG00015015365) Vaquita MODERN SPECIES 1 ELK3 (ENSPSNG00000012591) CDK17 (ENSPSNG00000012485) ENSPSNG00000012324 #7 NEDD1 (ENSPSNG00000012119) #10 ENSPSNG00000011873 #11 SLC25A3 (ENSPSNG00000011667) #12 IKBIP (ENSPSNG00000011556) #13 APAF1 (ENSPSNG00000011279) #14 ENSPSNG00000011235 ENSPSNG00000011179 GARIN6 (ENSPSNG00000011143) ENSPSNG00000011090 ANKS1B (ENSPSNG00000009944) #18 BLTP3B (ENSPSNG00000009410) #20 ACTR6 (ENSPSNG00000009262) #21 SCYL2 (ENSPSNG00000009144) #22 SLC17A8 (ENSPSNG00000008979) #23 NR1H4 (ENSPSNG00000008748) #24 GAS2L3 (ENSPSNG00000008665) #26 ANO4 (ENSPSNG00000008341) #27 SLC5A8 (ENSPSNG00000008157) #29 UTP20 (ENSPSNG00000008109) #30 ARL1 (ENSPSNG00000008015) #31 SPIC (ENSPSNG00000007910) #32 MYBPC1 (ENSPSNG00000006793) #33 CHPT1 (ENSPSNG00000006536) #34 SYCP3 (ENSPSNG00000006499) #35 GNPTAB (ENSPSNG00000006375) #36 DRAM1 (ENSPSNG00000006230) #37 WASHC3 (ENSPSNG00000006187) NUP37 (ENSPSNG00000006146) Dolphin MODERN SPECIES 5320 ENSTTRG00000001390 SCYL2 (ENSTTRG00000001391) #22 SLC17A8 (ENSTTRG00000001393) #23 Sperm whale MODERN SPECIES 17 HAL (ENSPCTG00005005851) LTA4H (ENSPCTG00005006181) ELK3 (ENSPCTG00005006435) CDK17 (ENSPCTG00005006524) ENSPCTG00005006592 #7 NEDD1 (ENSPCTG00005006658) #10 ENSPCTG00005006737 TMPO (ENSPCTG00005006842) #11 SLC25A3 (ENSPCTG00005007003) #12 IKBIP (ENSPCTG00005007080) #13 APAF1 (ENSPCTG00005007208) #14 ANKS1B (ENSPCTG00005007818) #18 BLTP3B (ENSPCTG00005010599) #20 ACTR6 (ENSPCTG00005010801) #21 DEPDC4 (ENSPCTG00005010961) SCYL2 (ENSPCTG00005011005) #22 SLC17A8 (ENSPCTG00005011129) #23 NR1H4 (ENSPCTG00005011367) #24 GAS2L3 (ENSPCTG00005011766) #26 ANO4 (ENSPCTG00005011868) #27 SLC5A8 (ENSPCTG00005012208) #29 UTP20 (ENSPCTG00005012384) #30 ARL1 (ENSPCTG00005012979) #31 SPIC (ENSPCTG00005013283) #32 ENSPCTG00005013365 MYBPC1 (ENSPCTG00005013500) #33 CHPT1 (ENSPCTG00005015686) #34 SYCP3 (ENSPCTG00005015907) #35 GNPTAB (ENSPCTG00005016010) #36 DRAM1 (ENSPCTG00005016159) #37 WASHC3 (ENSPCTG00005016226) Blue whale MODERN SPECIES 1 HAL (ENSBMSG00010009502) LTA4H (ENSBMSG00010009606) ELK3 (ENSBMSG00010009646) CDK17 (ENSBMSG00010009667) ENSBMSG00010009687 #7 NEDD1 (ENSBMSG00010009710) #10 ENSBMSG00010009758 ENSBMSG00010009790 #11 ENSBMSG00010009830 #12 IKBIP (ENSBMSG00010009856) #13 APAF1 (ENSBMSG00010009889) #14 ANKS1B (ENSBMSG00010010048) ##18 ENSBMSG00010010902 BLTP3B (ENSBMSG00010006007) #20 ACTR6 (ENSBMSG00010006031) #21 SCYL2 (ENSBMSG00010006075) #22 SLC17A8 (ENSBMSG00010006142) #23 NR1H4 (ENSBMSG00010006205) #24 GAS2L3 (ENSBMSG00010006259) #26 ANO4 (ENSBMSG00010006300) #27 SLC5A8 (ENSBMSG00010006402) #29 UTP20 (ENSBMSG00010006434) #30 ENSBMSG00010006485 #31 ENSBMSG00010006520 #32 MYBPC1 (ENSBMSG00010006609) #33 CHPT1 (ENSBMSG00010006840) #34 SYCP3 (ENSBMSG00010006857) #35 GNPTAB (ENSBMSG00010006890) #36 ENSBMSG00010006977 #37 ENSBMSG00010007004 ENSBMSG00010007014 Camelidae ANCESTRAL SPECIES 39 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Alpaca MODERN SPECIES 3564 BLTP3B (ENSVPAG00000006055) #20 ACTR6 (ENSVPAG00000006058) #21 DEPDC4 (ENSVPAG00000006060) SCYL2 (ENSVPAG00000006062) #22 SLC17A8 (ENSVPAG00000006064) #23 NR1H4 (ENSVPAG00000006065) #24 GAS2L3 (ENSVPAG00000006066) #26 Arabian camel MODERN SPECIES 3 HAL (ENSCDRG00005019802) LTA4H (ENSCDRG00005019737) ELK3 (ENSCDRG00005019714) CDK17 (ENSCDRG00005019682) CFAP54 (ENSCDRG00005019532) NEDD1 (ENSCDRG00005019455) #10 ENSCDRG00005019355 #11 SLC25A3 (ENSCDRG00005019299) #12 IKBIP (ENSCDRG00005019237) #13 APAF1 (ENSCDRG00005018836) #14 ENSCDRG00005018765 ANKS1B (ENSCDRG00005017933) #18 BLTP3B (ENSCDRG00005017658) #20 ACTR6 (ENSCDRG00005017579) #21 ENSCDRG00005017531 SCYL2 (ENSCDRG00005017362) #22 SLC17A8 (ENSCDRG00005017191) #23 NR1H4 (ENSCDRG00005017007) #24 GAS2L3 (ENSCDRG00005016924) #26 ANO4 (ENSCDRG00005016441) #27 SLC5A8 (ENSCDRG00005016273) #29 UTP20 (ENSCDRG00005016150) #30 ARL1 (ENSCDRG00005015998) #31 ENSCDRG00005015976 SPIC (ENSCDRG00005015956) #32 MYBPC1 (ENSCDRG00005011702) #33 CHPT1 (ENSCDRG00005011388) #34 SYCP3 (ENSCDRG00005011273) #35 GNPTAB (ENSCDRG00005010913) #36 ENSCDRG00005010766 #37 WASHC3 (ENSCDRG00005010638) Eulipotyphla ANCESTRAL SPECIES ENSGT00880000138031 #22 Common shrew MODERN SPECIES 2470 SCYL2 (ENSSARG00000004089) #22 Hedgehog MODERN SPECIES 3314 SCYL2 (ENSEEUG00000000175) #22 Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Glires ANCESTRAL SPECIES 4 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Rodentia ANCESTRAL SPECIES 5 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Myomorpha ANCESTRAL SPECIES 2 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Muroidea ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Muroidea_A ANCESTRAL SPECIES 22 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Cricetidae ANCESTRAL SPECIES 21 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Cricetidae_B ANCESTRAL SPECIES 29 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 10 Ccdc38 (ENSMOCG00000000418) Amdhd1 (ENSMOCG00000013736) Hal (ENSMOCG00000020920) Lta4h (ENSMOCG00000007811) Elk3 (ENSMOCG00000012020) Cdk17 (ENSMOCG00000014292) Cfap54 (ENSMOCG00000015195) Nedd1 (ENSMOCG00000016729) #10 Tmpo (ENSMOCG00000003846) #11 Slc25a3 (ENSMOCG00000011110) #12 Ikbip (ENSMOCG00000003674) #13 Apaf1 (ENSMOCG00000015964) #14 Anks1b (ENSMOCG00000008363) #18 Uhrf1bp1l (ENSMOCG00000003118) #20 Actr6 (ENSMOCG00000020691) #21 ENSMOCG00000016884 #22 Slc17a8 (ENSMOCG00000009428) #23 Nr1h4 (ENSMOCG00000006519) #24 Gas2l3 (ENSMOCG00000010014) #26 Ano4 (ENSMOCG00000015645) #27 Slc5a8 (ENSMOCG00000012457) #29 Utp20 (ENSMOCG00000015242) #30 Arl1 (ENSMOCG00000005852) #31 ENSMOCG00000009467 Spic (ENSMOCG00000015321) #32 Mybpc1 (ENSMOCG00000022013) #33 Chpt1 (ENSMOCG00000014213) #34 Sycp3 (ENSMOCG00000018486) #35 ENSMOCG00000016954 #36 Dram1 (ENSMOCG00000021435) #37 Washc3 (ENSMOCG00000018398) Prairie vole MODERN SPECIES 352 Il18rap (ENSMOCG00000000247) Il18r1 (ENSMOCG00000018379) Il1rl1 (ENSMOCG00000013141) Il1rl2 (ENSMOCG00000021017) Il1r1 (ENSMOCG00000012872) Il1r2 (ENSMOCG00000014917) Map4k4 (ENSMOCG00000003196) Rfx8 (ENSMOCG00000020079) Creg2 (ENSMOCG00000005255) ENSMOCG00000004327 ENSMOCG00000022614 Cnot11 (ENSMOCG00000020059) Tbc1d8 (ENSMOCG00000020892) Rpl31 (ENSMOCG00000012618) ENSMOCG00000003508 ENSMOCG00000015837 #22 ENSMOCG00000007220 Nms (ENSMOCG00000008968) Chst10 (ENSMOCG00000016355) Lonrf2 (ENSMOCG00000017896) ENSMOCG00000005572 ENSMOCG00000005082 ENSMOCG00000017401 ENSMOCG00000015713 Txndc9 (ENSMOCG00000009394) Lyg1 (ENSMOCG00000013025) Lyg2 (ENSMOCG00000022777) Mrpl30 (ENSMOCG00000005615) Mitd1 (ENSMOCG00000014690) Lipt1 (ENSMOCG00000013610) Tsga10 (ENSMOCG00000010193) Northern American deer mouse MODERN SPECIES 9 Ccdc38 (ENSPEMG00000021888) Amdhd1 (ENSPEMG00000022642) Hal (ENSPEMG00000022890) Lta4h (ENSPEMG00000024211) Elk3 (ENSPEMG00000015910) Cdk17 (ENSPEMG00000013082) Cfap54 (ENSPEMG00000022516) Nedd1 (ENSPEMG00000022166) #10 Tmpo (ENSPEMG00000013139) #11 Slc25a3 (ENSPEMG00000007546) #12 Ikbip (ENSPEMG00000003189) #13 Apaf1 (ENSPEMG00000013242) #14 Anks1b (ENSPEMG00000021142) #18 Uhrf1bp1l (ENSPEMG00000021207) #20 Actr6 (ENSPEMG00000007827) #21 Scyl2 (ENSPEMG00000015522) #22 ENSPEMG00000025459 Slc17a8 (ENSPEMG00000013525) #23 Nr1h4 (ENSPEMG00000021973) #24 Gas2l3 (ENSPEMG00000023391) #26 Ano4 (ENSPEMG00000009170) #27 Slc5a8 (ENSPEMG00000020559) #29 Utp20 (ENSPEMG00000024120) #30 Arl1 (ENSPEMG00000008781) #31 Spic (ENSPEMG00000020720) #32 Mybpc1 (ENSPEMG00000021020) #33 ENSPEMG00000012990 #34 Sycp3 (ENSPEMG00000021453) #35 Gnptab (ENSPEMG00000020834) #36 Dram1 (ENSPEMG00000021639) #37 Washc3 (ENSPEMG00000022296) Cricetinae ANCESTRAL SPECIES 22 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 83 Lta4h (ENSCGRG00001010777) Elk3 (ENSCGRG00001021882) Cdk17 (ENSCGRG00001016887) ENSCGRG00001019085 #7 ENSCGRG00001014718 Nedd1 (ENSCGRG00001019132) #10 Tmpo (ENSCGRG00001018759) #11 Slc25a3 (ENSCGRG00001015631) #12 Ikbip (ENSCGRG00001015426) #13 Apaf1 (ENSCGRG00001019923) #14 ENSCGRG00001010325 #18 ENSCGRG00001012704 #18 ENSCGRG00001007098 Uhrf1bp1l (ENSCGRG00001015837) #20 Actr6 (ENSCGRG00001019259) #21 ENSCGRG00001005091 #22 Slc17a8 (ENSCGRG00001021681) #23 Nr1h4 (ENSCGRG00001017990) #24 Gas2l3 (ENSCGRG00001015751) #26 Ano4 (ENSCGRG00001022718) #27 Slc5a8 (ENSCGRG00001014482) #29 Utp20 (ENSCGRG00001017151) #30 Arl1 (ENSCGRG00001010446) #31 ENSCGRG00001008037 Spic (ENSCGRG00001005919) #32 Mybpc1 (ENSCGRG00001023486) #33 Chpt1 (ENSCGRG00001011169) #34 Sycp3 (ENSCGRG00001006406) #35 Gnptab (ENSCGRG00001022192) #36 Dram1 (ENSCGRG00001017541) #37 Washc3 (ENSCGRG00001018411) Chinese hamster chok1gshd MODERN SPECIES 83 ENSCGRG00001014628 Glipr1 (ENSCGRG00001017559) Krr1 (ENSCGRG00001005995) ENSCGRG00001005440 Phlda1 (ENSCGRG00001012896) ENSCGRG00001019257 Bbs10 (ENSCGRG00001010466) Osbpl8 (ENSCGRG00001021286) Zdhhc17 (ENSCGRG00001007660) Csrp2 (ENSCGRG00001000844) E2f7 (ENSCGRG00001006568) ENSCGRG00001011762 Nav3 (ENSCGRG00001022037) Brcc3dc (ENSCGRG00001009076) Syt1 (ENSCGRG00001000069) ENSCGRG00001010398 #22 ENSCGRG00001009057 Pawr (ENSCGRG00001011044) Ppp1r12a (ENSCGRG00001017263) Otogl (ENSCGRG00001018530) Ptprq (ENSCGRG00001017128) Myf6 (ENSCGRG00001006341) Myf5 (ENSCGRG00001009370) Lin7a (ENSCGRG00001003313) Acss3 (ENSCGRG00001009906) Ppfia2 (ENSCGRG00001020914) ENSCGRG00001016413 Syn3 (ENSCGRG00001000589) Timp3 (ENSCGRG00001016875) Fbxo7 (ENSCGRG00001019488) Bpifc (ENSCGRG00001023438) Golden Hamster MODERN SPECIES 628 ENSMAUG00000008765 Elk3 (ENSMAUG00000009662) Cdk17 (ENSMAUG00000017263) ENSMAUG00000018845 #7 ENSMAUG00000021431 Nedd1 (ENSMAUG00000013081) #10 ENSMAUG00000015762 Tmpo (ENSMAUG00000014527) #11 Slc25a3 (ENSMAUG00000017601) #12 ENSMAUG00000022277 #13 ENSMAUG00000007841 #14 Anks1b (ENSMAUG00000010615) #18 Uhrf1bp1l (ENSMAUG00000013302) #20 ENSMAUG00000014661 #21 ENSMAUG00000010233 #21 Scyl2 (ENSMAUG00000013849) #22 Slc17a8 (ENSMAUG00000007901) #23 Nr1h4 (ENSMAUG00000011325) #24 Gas2l3 (ENSMAUG00000015984) #26 Ano4 (ENSMAUG00000021383) #27 Slc5a8 (ENSMAUG00000020619) #29 Utp20 (ENSMAUG00000011898) #30 Arl1 (ENSMAUG00000021923) #31 ENSMAUG00000008388 Mybpc1 (ENSMAUG00000008414) #33 Chpt1 (ENSMAUG00000012720) #34 Sycp3 (ENSMAUG00000012167) #35 Gnptab (ENSMAUG00000017361) #36 Dram1 (ENSMAUG00000022048) #37 Washc3 (ENSMAUG00000011959) Nup37 (ENSMAUG00000011627) Murinae ANCESTRAL SPECIES 22 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Mus ANCESTRAL SPECIES 23 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Mus_C ANCESTRAL SPECIES 7 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 spretus MODERN SPECIES 1 Ccdc38 (MGP_SPRETEiJ_G0016552) Amdhd1 (MGP_SPRETEiJ_G0016551) Hal (MGP_SPRETEiJ_G0016550) Lta4h (MGP_SPRETEiJ_G0016549) Elk3 (MGP_SPRETEiJ_G0016548) Cdk17 (MGP_SPRETEiJ_G0016547) Cfap54 (MGP_SPRETEiJ_G0016546) Nedd1 (MGP_SPRETEiJ_G0016545) #10 Tmpo (MGP_SPRETEiJ_G0016544) #11 Slc25a3 (MGP_SPRETEiJ_G0016543) #12 Ikbip (MGP_SPRETEiJ_G0016542) #13 Apaf1 (MGP_SPRETEiJ_G0016541) #14 Anks1b (MGP_SPRETEiJ_G0016540) #18 Uhrf1bp1l (MGP_SPRETEiJ_G0016539) #20 Actr6 (MGP_SPRETEiJ_G0016538) #21 Scyl2 (MGP_SPRETEiJ_G0016537) #22 Slc17a8 (MGP_SPRETEiJ_G0016536) #23 Nr1h4 (MGP_SPRETEiJ_G0016535) #24 Gas2l3 (MGP_SPRETEiJ_G0016534) #26 Ano4 (MGP_SPRETEiJ_G0016533) #27 Slc5a8 (MGP_SPRETEiJ_G0016532) #29 Utp20 (MGP_SPRETEiJ_G0016531) #30 Arl1 (MGP_SPRETEiJ_G0016530) #31 Spic (MGP_SPRETEiJ_G0016529) #32 Mybpc1 (MGP_SPRETEiJ_G0016528) #33 MGP_SPRETEiJ_G0016527 #34 Sycp3 (MGP_SPRETEiJ_G0016526) #35 Gnptab (MGP_SPRETEiJ_G0016525) #36 Dram1 (MGP_SPRETEiJ_G0016524) #37 Washc3 (MGP_SPRETEiJ_G0016523) Nup37 (MGP_SPRETEiJ_G0016522) Steppe mouse MODERN SPECIES 2939 Uhrf1bp1l (ENSMSIG00000017125) #20 Actr6 (ENSMSIG00000017172) #21 Scyl2 (ENSMSIG00000017210) #22 Slc17a8 (ENSMSIG00000017267) #23 Nr1h4 (ENSMSIG00000017294) #24 Gas2l3 (ENSMSIG00000017395) #26 Ano4 (ENSMSIG00000017553) #27 Slc5a8 (ENSMSIG00000017818) #29 ENSMSIG00000017854 Utp20 (ENSMSIG00000017862) #30 ENSMSIG00000017985 ENSMSIG00000017992 Spic (ENSMSIG00000018013) #32 Mybpc1 (ENSMSIG00000018042) #33 Mouse MODERN SPECIES 1 Ccdc38 (ENSMUSG00000036168) Amdhd1 (ENSMUSG00000015890) Hal (ENSMUSG00000020017) Lta4h (ENSMUSG00000015889) Elk3 (ENSMUSG00000008398) Cdk17 (ENSMUSG00000020015) Cfap54 (ENSMUSG00000020014) Nedd1 (ENSMUSG00000019988) #10 Tmpo (ENSMUSG00000019961) #11 Slc25a3 (ENSMUSG00000061904) #12 Ikbip (ENSMUSG00000019975) #13 Apaf1 (ENSMUSG00000019979) #14 Anks1b (ENSMUSG00000058589) #18 Uhrf1bp1l (ENSMUSG00000019951) #20 Actr6 (ENSMUSG00000019948) #21 Scyl2 (ENSMUSG00000069539) #22 Slc17a8 (ENSMUSG00000019935) #23 Nr1h4 (ENSMUSG00000047638) #24 Gas2l3 (ENSMUSG00000074802) #26 Ano4 (ENSMUSG00000035189) #27 Slc5a8 (ENSMUSG00000020062) #29 Utp20 (ENSMUSG00000004356) #30 Arl1 (ENSMUSG00000060904) #31 Spic (ENSMUSG00000004359) #32 Mybpc1 (ENSMUSG00000020061) #33 Sycp3 (ENSMUSG00000020059) #35 Chpt1 (ENSMUSG00000060002) #34 Gnptab (ENSMUSG00000035311) #36 Dram1 (ENSMUSG00000020057) #37 Washc3 (ENSMUSG00000020056) Nup37 (ENSMUSG00000035351) Ryukyu mouse MODERN SPECIES 1 Ccdc38 (MGP_CAROLIEiJ_G0015734) Amdhd1 (MGP_CAROLIEiJ_G0015733) Hal (MGP_CAROLIEiJ_G0015732) Lta4h (MGP_CAROLIEiJ_G0015731) Elk3 (MGP_CAROLIEiJ_G0015730) Cdk17 (MGP_CAROLIEiJ_G0015729) Cfap54 (MGP_CAROLIEiJ_G0015728) Nedd1 (MGP_CAROLIEiJ_G0015727) #10 MGP_CAROLIEiJ_G0015726 ##11 Slc25a3 (MGP_CAROLIEiJ_G0015725) #12 Ikbip (MGP_CAROLIEiJ_G0015724) #13 Apaf1 (MGP_CAROLIEiJ_G0015723) #14 Anks1b (MGP_CAROLIEiJ_G0015722) #18 Uhrf1bp1l (MGP_CAROLIEiJ_G0015721) #20 Actr6 (MGP_CAROLIEiJ_G0015720) #21 Scyl2 (MGP_CAROLIEiJ_G0015719) #22 Slc17a8 (MGP_CAROLIEiJ_G0015718) #23 Nr1h4 (MGP_CAROLIEiJ_G0015717) #24 Gas2l3 (MGP_CAROLIEiJ_G0015716) #26 Ano4 (MGP_CAROLIEiJ_G0015715) #27 Slc5a8 (MGP_CAROLIEiJ_G0015714) #29 Utp20 (MGP_CAROLIEiJ_G0015713) #30 Arl1 (MGP_CAROLIEiJ_G0015712) #31 MGP_CAROLIEiJ_G0015711 #32 Mybpc1 (MGP_CAROLIEiJ_G0015710) #33 Sycp3 (MGP_CAROLIEiJ_G0015709) #35 Chpt1 (MGP_CAROLIEiJ_G0015708) #34 Gnptab (MGP_CAROLIEiJ_G0015707) #36 Dram1 (MGP_CAROLIEiJ_G0015706) #37 Washc3 (MGP_CAROLIEiJ_G0015705) Nup37 (MGP_CAROLIEiJ_G0015704) Shrew mouse MODERN SPECIES 22 Ccdc38 (MGP_PahariEiJ_G0031351) MGP_PahariEiJ_G0031352 Hal (MGP_PahariEiJ_G0031353) Lta4h (MGP_PahariEiJ_G0031354) Elk3 (MGP_PahariEiJ_G0031355) Cdk17 (MGP_PahariEiJ_G0031356) Cfap54 (MGP_PahariEiJ_G0031357) Nedd1 (MGP_PahariEiJ_G0031358) #10 Tmpo (MGP_PahariEiJ_G0031359) #11 Slc25a3 (MGP_PahariEiJ_G0031360) #12 Ikbip (MGP_PahariEiJ_G0031361) #13 Apaf1 (MGP_PahariEiJ_G0031362) #14 Anks1b (MGP_PahariEiJ_G0031363) #18 Uhrf1bp1l (MGP_PahariEiJ_G0031364) #20 Actr6 (MGP_PahariEiJ_G0031365) #21 Scyl2 (MGP_PahariEiJ_G0031366) #22 Slc17a8 (MGP_PahariEiJ_G0031367) #23 Nr1h4 (MGP_PahariEiJ_G0031368) #24 Gas2l3 (MGP_PahariEiJ_G0031369) #26 Ano4 (MGP_PahariEiJ_G0031370) #27 Slc5a8 (MGP_PahariEiJ_G0031371) #29 Utp20 (MGP_PahariEiJ_G0031372) #30 Arl1 (MGP_PahariEiJ_G0031373) #31 Spic (MGP_PahariEiJ_G0031374) #32 Mybpc1 (MGP_PahariEiJ_G0031375) #33 MGP_PahariEiJ_G0031376 #34 Sycp3 (MGP_PahariEiJ_G0031377) #35 Gnptab (MGP_PahariEiJ_G0031378) #36 Dram1 (MGP_PahariEiJ_G0031379) #37 Washc3 (MGP_PahariEiJ_G0031380) Nup37 (MGP_PahariEiJ_G0031381) Rat MODERN SPECIES 17 Hal (ENSRNOG00000004502) Lta4h (ENSRNOG00000004494) Elk3 (ENSRNOG00000004367) Cdk17 (ENSRNOG00000004148) Cfap54 (ENSRNOG00000024494) Nedd1 (ENSRNOG00000004011) #10 AABR07056611.1 (ENSRNOG00000055726) ENSRNOG00000064198 Tmpo (ENSRNOG00000008797) #12 Ikbip (ENSRNOG00000008247) #13 Apaf1 (ENSRNOG00000008022) #14 Anks1b (ENSRNOG00000024870) #18 Bltp3b (ENSRNOG00000050317) #20 ENSRNOG00000065049 Actr6 (ENSRNOG00000007875) #21 Scyl2 (ENSRNOG00000024955) #22 Slc17a8 (ENSRNOG00000007581) #23 ENSRNOG00000068987 Nr1h4 (ENSRNOG00000007197) #24 Gas2l3 (ENSRNOG00000063755) #26 LOC103692829 (ENSRNOG00000061320) AABR07056556.1 (ENSRNOG00000032424) Ano4 (ENSRNOG00000006841) #27 Slc5a8 (ENSRNOG00000006367) #29 Utp20 (ENSRNOG00000005823) #30 Arl1 (ENSRNOG00000005763) #31 Rps12l4 (ENSRNOG00000043412) Spic (ENSRNOG00000005720) #32 Mybpc1 (ENSRNOG00000056493) #33 Sycp3 (ENSRNOG00000005270) #35 Chpt1 (ENSRNOG00000058271) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 1572 ENSNGAG00000017932 #18 Uhrf1bp1l (ENSNGAG00000016616) #20 Actr6 (ENSNGAG00000014912) #21 ENSNGAG00000014516 #22 ENSNGAG00000014156 Slc17a8 (ENSNGAG00000013808) #23 Lesser Egyptian jerboa MODERN SPECIES 42 Hal (ENSJJAG00000010741) Lta4h (ENSJJAG00000011318) Elk3 (ENSJJAG00000010853) Cdk17 (ENSJJAG00000013291) ENSJJAG00000014966 #7 ENSJJAG00000017399 Nedd1 (ENSJJAG00000010994) #10 Tmpo (ENSJJAG00000018127) #11 Slc25a3 (ENSJJAG00000013339) #12 ENSJJAG00000017372 #13 Apaf1 (ENSJJAG00000014169) #14 ENSJJAG00000023848 #18 ENSJJAG00000018878 #18 Uhrf1bp1l (ENSJJAG00000023679) #20 Actr6 (ENSJJAG00000012412) #21 ENSJJAG00000014007 #22 Slc17a8 (ENSJJAG00000016274) #23 Nr1h4 (ENSJJAG00000017445) #24 ENSJJAG00000017605 #26 Ano4 (ENSJJAG00000021544) #27 Slc5a8 (ENSJJAG00000018761) #29 Utp20 (ENSJJAG00000019321) #30 ENSJJAG00000020719 #31 Mybpc1 (ENSJJAG00000020768) #33 ENSJJAG00000001967 #34 Sycp3 (ENSJJAG00000017653) #35 ENSJJAG00000022706 #36 Dram1 (ENSJJAG00000023953) #37 Washc3 (ENSJJAG00000019930) Nup37 (ENSJJAG00000018864) ENSJJAG00000021125 Kangaroo rat MODERN SPECIES 322 Cdk17 (ENSDORG00000014799) ENSDORG00000025108 ENSDORG00000005572 #7 ENSDORG00000025279 ENSDORG00000026947 Nedd1 (ENSDORG00000001204) #10 ENSDORG00000027259 ENSDORG00000023396 ##11 Slc25a3 (ENSDORG00000011431) #12 Ikbip (ENSDORG00000011434) #13 Apaf1 (ENSDORG00000009253) #14 ENSDORG00000009254 #18 ENSDORG00000028031 #18 Uhrf1bp1l (ENSDORG00000024278) #20 Actr6 (ENSDORG00000012723) #21 ENSDORG00000003101 #22 Slc17a8 (ENSDORG00000029543) #23 Nr1h4 (ENSDORG00000001224) #24 ENSDORG00000001225 #26 Ano4 (ENSDORG00000001013) #27 Slc5a8 (ENSDORG00000013252) #29 Utp20 (ENSDORG00000014762) #30 Arl1 (ENSDORG00000014770) #31 Spic (ENSDORG00000003709) #32 Mybpc1 (ENSDORG00000004026) #33 Chpt1 (ENSDORG00000004030) #34 ENSDORG00000004032 #35 Gnptab (ENSDORG00000023503) #36 Dram1 (ENSDORG00000003107) #37 Washc3 (ENSDORG00000029910) Nup37 (ENSDORG00000002780) Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118.y.a #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Long-tailed chinchilla MODERN SPECIES 112 HAL (ENSCLAG00000009969) Lta4h (ENSCLAG00000011828) ELK3 (ENSCLAG00000014957) CDK17 (ENSCLAG00000012821) CFAP54 (ENSCLAG00000008151) NEDD1 (ENSCLAG00000013064) #10 ENSCLAG00000007083 TMPO (ENSCLAG00000007244) ##11 SLC25A3 (ENSCLAG00000007243) #12 IKBIP (ENSCLAG00000008628) #13 APAF1 (ENSCLAG00000009227) #14 ANKS1B (ENSCLAG00000009661) #18 ENSCLAG00000009179 BLTP3B (ENSCLAG00000012501) #20 ACTR6 (ENSCLAG00000007878) #21 SCYL2 (ENSCLAG00000010496) #22 SLC17A8 (ENSCLAG00000011320) #23 ENSCLAG00000015655 NR1H4 (ENSCLAG00000012775) #24 GAS2L3 (ENSCLAG00000007654) #26 ANO4 (ENSCLAG00000014090) #27 SLC5A8 (ENSCLAG00000009574) #29 UTP20 (ENSCLAG00000011569) #30 ARL1 (ENSCLAG00000008180) #31 SPIC (ENSCLAG00000016048) #32 MYBPC1 (ENSCLAG00000006936) #33 ENSCLAG00000012024 #34 SYCP3 (ENSCLAG00000006962) #35 GNPTAB (ENSCLAG00000007404) #36 DRAM1 (ENSCLAG00000008068) #37 WASHC3 (ENSCLAG00000008749) Degu MODERN SPECIES 45 ENSODEG00000010263 ENSODEG00000019742 ENSODEG00000019648 ENSODEG00000013377 #11 SLC25A3 (ENSODEG00000009995) #12 ENSODEG00000010948 #13 APAF1 (ENSODEG00000010122) #14 ENSODEG00000019813 ENSODEG00000010313 #18 ENSODEG00000010573 ENSODEG00000010991 ENSODEG00000010669 #18 ENSODEG00000011572 BLTP3B (ENSODEG00000010196) #20 ENSODEG00000010649 #21 ENSODEG00000011114 #22 SLC17A8 (ENSODEG00000010869) #23 NR1H4 (ENSODEG00000012027) #24 ENSODEG00000010407 #26 ENSODEG00000009780 ANO4 (ENSODEG00000011009) #27 ENSODEG00000010202 SLC5A8 (ENSODEG00000010696) #29 UTP20 (ENSODEG00000013411) #30 ENSODEG00000010531 #31 SPIC (ENSODEG00000010078) #32 ENSODEG00000010424 MYBPC1 (ENSODEG00000012077) #33 CHPT1 (ENSODEG00000011230) #34 SYCP3 (ENSODEG00000011961) #35 GNPTAB (ENSODEG00000012289) #36 Guinea pig MODERN SPECIES 9 AMDHD1 (ENSCPOG00000001031) HAL (ENSCPOG00000013043) LTA4H (ENSCPOG00000013048) ELK3 (ENSCPOG00000005065) CDK17 (ENSCPOG00000005070) CFAP54 (ENSCPOG00000009624) NEDD1 (ENSCPOG00000009631) #10 ENSCPOG00000004978 TMPO (ENSCPOG00000011604) ##11 SLC25A3 (ENSCPOG00000011606) #12 IKBIP (ENSCPOG00000040634) #13 APAF1 (ENSCPOG00000015196) #14 ANKS1B (ENSCPOG00000015197) #18 BLTP3B (ENSCPOG00000009379) #20 ACTR6 (ENSCPOG00000024022) #21 SCYL2 (ENSCPOG00000015459) #22 SLC17A8 (ENSCPOG00000009083) #23 NR1H4 (ENSCPOG00000002168) #24 GAS2L3 (ENSCPOG00000036868) #26 ANO4 (ENSCPOG00000008963) #27 SLC5A8 (ENSCPOG00000010055) #29 UTP20 (ENSCPOG00000003129) #30 ARL1 (ENSCPOG00000026014) #31 SPIC (ENSCPOG00000007301) #32 MYBPC1 (ENSCPOG00000011180) #33 CHPT1 (ENSCPOG00000001199) #34 SYCP3 (ENSCPOG00000001202) #35 GNPTAB (ENSCPOG00000022501) #36 ENSCPOG00000034099 #37 WASHC3 (ENSCPOG00000036997) NUP37 (ENSCPOG00000011895) Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000006066 CFAP54 (ENSHGLG00000004618) ENSHGLG00000011260 NEDD1 (ENSHGLG00000012733) #10 ENSHGLG00000037736 ENSHGLG00000032527 ENSHGLG00000010848 #11 ENSHGLG00000008601 #12 IKBIP (ENSHGLG00000047603) #13 ENSHGLG00000049820 APAF1 (ENSHGLG00000007198) #14 ENSHGLG00000016527 #18 ENSHGLG00000041800 #18 BLTP3B (ENSHGLG00000008977) #20 ACTR6 (ENSHGLG00000006255) #21 SCYL2 (ENSHGLG00000004458) #22 SLC17A8 (ENSHGLG00000004252) #23 NR1H4 (ENSHGLG00000038152) #24 ENSHGLG00000006370 ENSHGLG00000039506 ANO4 (ENSHGLG00000010936) #27 SLC5A8 (ENSHGLG00000008465) #29 ENSHGLG00000046315 #31 ENSHGLG00000044877 SPIC (ENSHGLG00000039584) #32 ENSHGLG00000050337 #33 ENSHGLG00000039302 ENSHGLG00000005709 #34 SYCP3 (ENSHGLG00000004845) #35 ENSHGLG00000034643 #36 DRAM1 (ENSHGLG00000009546) #37 Sciuridae ANCESTRAL SPECIES 14 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 14 ENSSVLG00005005745 ENSSVLG00005005778 #7 ENSSVLG00005005829 NEDD1 (ENSSVLG00005005868) #10 ENSSVLG00005006011 #11 ENSSVLG00005006115 #12 IKBIP (ENSSVLG00005006279) #13 APAF1 (ENSSVLG00005006518) #14 ENSSVLG00005007229 ##8 ANKS1B (ENSSVLG00005007585) #18 GARIN6 (ENSSVLG00005008609) ENSSVLG00005008635 ENSSVLG00005008665 BLTP3B (ENSSVLG00005008712) #20 ACTR6 (ENSSVLG00005008778) #21 ENSSVLG00005008897 #22 SLC17A8 (ENSSVLG00005009180) #23 NR1H4 (ENSSVLG00005009339) #24 GAS2L3 (ENSSVLG00005009544) #26 ANO4 (ENSSVLG00005009692) #27 SLC5A8 (ENSSVLG00005010200) #29 ENSSVLG00005010295 UTP20 (ENSSVLG00005010358) #30 ARL1 (ENSSVLG00005007015) #31 ENSSVLG00005007121 #32 MYBPC1 (ENSSVLG00005007401) #33 CHPT1 (ENSSVLG00005008570) #34 SYCP3 (ENSSVLG00005008597) #35 GNPTAB (ENSSVLG00005008675) #36 DRAM1 (ENSSVLG00005008749) #37 WASHC3 (ENSSVLG00005008789) Eurasian red squirrel MODERN SPECIES IFFO2 (ENSSVLG00005001755) UBR4 (ENSSVLG00005001808) EMC1 (ENSSVLG00005001895) ENSSVLG00005001942 ENSSVLG00005001971 ENSSVLG00005001993 ENSSVLG00005002008 SLC66A1 (ENSSVLG00005002036) CAPZB (ENSSVLG00005002066) ENSSVLG00005002124 ENSSVLG00005002145 NBL1 (ENSSVLG00005002155) HTR6 (ENSSVLG00005002183) TMCO4 (ENSSVLG00005002227) RNF186 (ENSSVLG00005002260) ENSSVLG00005002272 #22 ENSSVLG00005002288 OTUD3 (ENSSVLG00005002298) PLA2G2E (ENSSVLG00005002318) ENSSVLG00005002333 PLA2G2A (ENSSVLG00005002419) PLA2G5 (ENSSVLG00005002531) PLA2G2D (ENSSVLG00005002551) PLA2G2F (ENSSVLG00005002583) PLA2G2C (ENSSVLG00005002602) UBXN10 (ENSSVLG00005002615) VWA5B1 (ENSSVLG00005002638) CAMK2N1 (ENSSVLG00005002728) MUL1 (ENSSVLG00005002743) FAM43B (ENSSVLG00005002758) ENSSVLG00005002772 Marmotini ANCESTRAL SPECIES 4 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.e #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Marmotini_b ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.e #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Squirrel MODERN SPECIES 92 TMPO (ENSSTOG00000009169) ##11 SLC25A3 (ENSSTOG00000027633) #12 IKBIP (ENSSTOG00000026100) #13 APAF1 (ENSSTOG00000028539) #14 ANKS1B (ENSSTOG00000012238) #18 BLTP3B (ENSSTOG00000004850) #20 ACTR6 (ENSSTOG00000004895) #21 SCYL2 (ENSSTOG00000011753) #22 SLC17A8 (ENSSTOG00000011763) #23 NR1H4 (ENSSTOG00000011771) #24 GAS2L3 (ENSSTOG00000011780) #26 ANO4 (ENSSTOG00000016283) #27 SLC5A8 (ENSSTOG00000016289) #29 UTP20 (ENSSTOG00000015995) #30 ARL1 (ENSSTOG00000016022) #31 ENSSTOG00000015457 #32 MYBPC1 (ENSSTOG00000003034) #33 CHPT1 (ENSSTOG00000011736) #34 SYCP3 (ENSSTOG00000001853) #35 GNPTAB (ENSSTOG00000001855) #36 DRAM1 (ENSSTOG00000001865) #37 WASHC3 (ENSSTOG00000029775) NUP37 (ENSSTOG00000001874) Arctic ground squirrel MODERN SPECIES 6 HAL (ENSUPAG00010006474) LTA4H (ENSUPAG00010006436) ELK3 (ENSUPAG00010006425) ENSUPAG00010006422 CDK17 (ENSUPAG00010006388) CFAP54 (ENSUPAG00010006280) NEDD1 (ENSUPAG00010006247) #10 ENSUPAG00010006109 #11 SLC25A3 (ENSUPAG00010006073) #12 IKBIP (ENSUPAG00010006055) #13 APAF1 (ENSUPAG00010006002) #14 GARIN6 (ENSUPAG00010005992) ANKS1B (ENSUPAG00010003556) #18 BLTP3B (ENSUPAG00010003512) #20 ACTR6 (ENSUPAG00010003498) #21 SCYL2 (ENSUPAG00010003458) #22 SLC17A8 (ENSUPAG00010003443) #23 NR1H4 (ENSUPAG00010003387) #24 GAS2L3 (ENSUPAG00010003356) #26 ENSUPAG00010003346 ANO4 (ENSUPAG00010003185) #27 SLC5A8 (ENSUPAG00010003154) #29 UTP20 (ENSUPAG00010003081) #30 ARL1 (ENSUPAG00010003075) #31 MYBPC1 (ENSUPAG00010002997) #33 CHPT1 (ENSUPAG00010002983) #34 SYCP3 (ENSUPAG00010002966) #35 GNPTAB (ENSUPAG00010002938) #36 DRAM1 (ENSUPAG00010002927) #37 WASHC3 (ENSUPAG00010002918) NUP37 (ENSUPAG00010002890) Alpin marmot MODERN SPECIES 11 LTA4H (ENSMMMG00000020008) ELK3 (ENSMMMG00000020001) CDK17 (ENSMMMG00000019989) ENSMMMG00000019968 #7 ENSMMMG00000019958 NEDD1 (ENSMMMG00000019953) #10 ENSMMMG00000019863 #11 SLC25A3 (ENSMMMG00000019846) #12 IKBIP (ENSMMMG00000019840) #13 APAF1 (ENSMMMG00000019774) #14 ENSMMMG00000019768 GARIN6 (ENSMMMG00000019762) ANKS1B (ENSMMMG00000018366) #18 BLTP3B (ENSMMMG00000018268) #20 ACTR6 (ENSMMMG00000018236) #21 SCYL2 (ENSMMMG00000018205) #22 SLC17A8 (ENSMMMG00000018190) #23 NR1H4 (ENSMMMG00000018110) #24 GAS2L3 (ENSMMMG00000018095) #26 ANO4 (ENSMMMG00000017942) #27 SLC5A8 (ENSMMMG00000017894) #29 UTP20 (ENSMMMG00000017841) #30 ARL1 (ENSMMMG00000017821) #31 SPIC (ENSMMMG00000017812) #32 MYBPC1 (ENSMMMG00000017763) #33 CHPT1 (ENSMMMG00000017731) #34 SYCP3 (ENSMMMG00000017715) #35 GNPTAB (ENSMMMG00000017694) #36 DRAM1 (ENSMMMG00000017688) #37 WASHC3 (ENSMMMG00000017678) NUP37 (ENSMMMG00000017664) Lagomorpha ANCESTRAL SPECIES 22 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000162770 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 ENSGT00390000006088 ENSGT00390000004984 Rabbit MODERN SPECIES 15 LTA4H (ENSOCUG00000005535) ELK3 (ENSOCUG00000034370) CDK17 (ENSOCUG00000013583) CFAP54 (ENSOCUG00000013917) NEDD1 (ENSOCUG00000010944) #10 ENSOCUG00000012692 #11 SLC25A3 (ENSOCUG00000011847) #12 IKBIP (ENSOCUG00000011854) #13 APAF1 (ENSOCUG00000011860) #14 ANKS1B (ENSOCUG00000029510) #18 ENSOCUG00000011887 ENSOCUG00000032944 #20 ENSOCUG00000017132 #20 ACTR6 (ENSOCUG00000000141) #21 ENSOCUG00000024669 SCYL2 (ENSOCUG00000009146) #22 SLC17A8 (ENSOCUG00000015995) #23 NR1H4 (ENSOCUG00000007177) #24 GAS2L3 (ENSOCUG00000007182) #26 ENSOCUG00000033171 ANO4 (ENSOCUG00000000881) #27 ENSOCUG00000036878 #15 SLC5A8 (ENSOCUG00000003486) #29 ENSOCUG00000037051 #15 UTP20 (ENSOCUG00000010475) #30 ARL1 (ENSOCUG00000002217) #31 ENSOCUG00000029302 ENSOCUG00000030138 ENSOCUG00000008070 #32 ENSOCUG00000033531 MYBPC1 (ENSOCUG00000009276) #33 Pika MODERN SPECIES 1374 ENSOPRG00000007982 #22 ENSOPRG00000008010 #23 Tree shrew MODERN SPECIES 5062 ENSTBEG00000016345 #22 SLC17A8 (ENSTBEG00000016510) #23 NR1H4 (ENSTBEG00000016715) #24 GAS2L3 (ENSTBEG00000016732) #26 Primates ANCESTRAL SPECIES 6 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Haplorrhini ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00880000138031.i #22 Platyrrhini ANCESTRAL SPECIES 6 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708.p #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00910000147278 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.i #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Cebidae ANCESTRAL SPECIES 2 ENSGT00940000153272.a.b.p.a ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708.p #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.i #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Cebidae_a ANCESTRAL SPECIES 8 ENSGT00940000153272.a.b.p.a ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708.p #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.i #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00390000018868.A.c.b ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Capuchin MODERN SPECIES 18 CFAP54 (ENSCCAG00000030981) NEDD1 (ENSCCAG00000021182) #10 ENSCCAG00000037273 ENSCCAG00000021602 #11 ENSCCAG00000019847 ENSCCAG00000001210 ENSCCAG00000021600 #12 IKBIP (ENSCCAG00000035750) #13 APAF1 (ENSCCAG00000036130) #14 ANKS1B (ENSCCAG00000032069) #18 FAM71C (ENSCCAG00000035595) UHRF1BP1L (ENSCCAG00000037649) #20 ENSCCAG00000037286 ACTR6 (ENSCCAG00000024707) #21 ENSCCAG00000031769 ENSCCAG00000008128 #22 SLC17A8 (ENSCCAG00000001913) #23 NR1H4 (ENSCCAG00000021055) #24 GAS2L3 (ENSCCAG00000037369) #26 ANO4 (ENSCCAG00000034484) #27 ENSCCAG00000018652 ENSCCAG00000000039 SLC5A8 (ENSCCAG00000019178) #29 UTP20 (ENSCCAG00000031422) #30 ARL1 (ENSCCAG00000025938) #31 SPIC (ENSCCAG00000023632) #32 ENSCCAG00000011395 MYBPC1 (ENSCCAG00000034345) #33 CHPT1 (ENSCCAG00000021551) #34 ENSCCAG00000020303 #35 GNPTAB (ENSCCAG00000030235) #36 Bolivian squirrel monkey MODERN SPECIES 76 ELK3 (ENSSBOG00000033992) CDK17 (ENSSBOG00000023998) ENSSBOG00000027979 CFAP54 (ENSSBOG00000024712) NEDD1 (ENSSBOG00000032018) #10 ENSSBOG00000022813 #11 ENSSBOG00000035474 #12 IKBIP (ENSSBOG00000030243) #13 APAF1 (ENSSBOG00000031901) #14 ANKS1B (ENSSBOG00000032447) #18 GARIN6 (ENSSBOG00000024096) BLTP3B (ENSSBOG00000024132) #20 ENSSBOG00000019564 ACTR6 (ENSSBOG00000022083) #21 ENSSBOG00000023923 ENSSBOG00000030821 #22 SLC17A8 (ENSSBOG00000035794) #23 NR1H4 (ENSSBOG00000021182) #24 GAS2L3 (ENSSBOG00000035385) #26 ANO4 (ENSSBOG00000031410) #27 ENSSBOG00000031381 SLC5A8 (ENSSBOG00000033836) #29 UTP20 (ENSSBOG00000035762) #30 ENSSBOG00000024352 #31 SPIC (ENSSBOG00000031070) #32 ENSSBOG00000025315 MYBPC1 (ENSSBOG00000024613) #33 CHPT1 (ENSSBOG00000023502) #34 SYCP3 (ENSSBOG00000035026) #35 GNPTAB (ENSSBOG00000027264) #36 DRAM1 (ENSSBOG00000036041) #37 Marmoset MODERN SPECIES 21 ENSCJAG00000076158 CDK17 (ENSCJAG00000002538) CFAP54 (ENSCJAG00000002500) NEDD1 (ENSCJAG00000002430) #10 ENSCJAG00000074115 ENSCJAG00000002421 #11 ENSCJAG00000002392 #12 IKBIP (ENSCJAG00000002387) #13 APAF1 (ENSCJAG00000002341) #14 ANKS1B (ENSCJAG00000002273) #18 ENSCJAG00000078320 GARIN6 (ENSCJAG00000002335) BLTP3B (ENSCJAG00000002230) #20 ENSCJAG00000082439 ACTR6 (ENSCJAG00000002192) #21 ENSCJAG00000002141 #22 NR1H4 (ENSCJAG00000002087) #24 ENSCJAG00000070677 GAS2L3 (ENSCJAG00000002065) #26 ANO4 (ENSCJAG00000001995) #27 SLC5A8 (ENSCJAG00000001983) #29 UTP20 (ENSCJAG00000001913) #30 ARL1 (ENSCJAG00000001966) #31 ENSCJAG00000056099 ENSCJAG00000074317 SPIC (ENSCJAG00000001906) #32 ENSCJAG00000078786 ENSCJAG00000072908 MYBPC1 (ENSCJAG00000001676) #33 CHPT1 (ENSCJAG00000001667) #34 ENSCJAG00000001658 #35 Mas night monkey MODERN SPECIES 844 ENSANAG00000036190 ENSANAG00000030628 CFAP54 (ENSANAG00000033133) NEDD1 (ENSANAG00000023249) #10 ENSANAG00000031573 #11 ENSANAG00000019441 #12 IKBIP (ENSANAG00000029855) #13 ENSANAG00000028428 APAF1 (ENSANAG00000025094) #14 ENSANAG00000026705 GARIN6 (ENSANAG00000031553) ANKS1B (ENSANAG00000020547) #18 BLTP3B (ENSANAG00000021484) #20 ACTR6 (ENSANAG00000027199) #21 DEPDC4 (ENSANAG00000036231) ENSANAG00000028938 #22 SLC17A8 (ENSANAG00000030963) #23 NR1H4 (ENSANAG00000030336) #24 GAS2L3 (ENSANAG00000025902) #26 ENSANAG00000025598 ENSANAG00000026695 ANO4 (ENSANAG00000033189) #27 SLC5A8 (ENSANAG00000033997) #29 UTP20 (ENSANAG00000027152) #30 ARL1 (ENSANAG00000023491) #31 SPIC (ENSANAG00000024577) #32 ENSANAG00000024431 MYBPC1 (ENSANAG00000025760) #33 CHPT1 (ENSANAG00000023069) #34 SYCP3 (ENSANAG00000023138) #35 GNPTAB (ENSANAG00000024914) #36 Catarrhini ANCESTRAL SPECIES 16 ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.b ENSGT00390000000685.o.a ENSGT00950000183314 ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00910000148331 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b Hominoidea ANCESTRAL SPECIES 15 ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.b ENSGT00390000000685.o.a ENSGT00940000154319.u.a.d ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00880000138031.j #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b Hominidae ANCESTRAL SPECIES 17 ENSGT00930000150950.b.m.b ENSGT00390000005530.a.a ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00610000087446 ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.a ENSGT00940000154319.u.a.d ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00950000183123.g.b.b.i.a.a.b ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.b ENSGT00390000000685.o.a ENSGT00940000154319.u.a.d ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00950000183123.g.b.b.i.a.a.b ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b Pan ANCESTRAL SPECIES 12 ENSGT00390000015889.j ENSGT00610000087446 ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.a ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00950000183123.g.b.b.i.a.a.b ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b Bonobo MODERN SPECIES 15 FAM117B (ENSPPAG00000041596) BMPR2 (ENSPPAG00000017269) ENSPPAG00000043823 NOP58 (ENSPPAG00000036626) ENSPPAG00000039520 ENSPPAG00000039551 ENSPPAG00000036444 KIAA2012 (ENSPPAG00000038457) FZD7 (ENSPPAG00000030490) CDK15 (ENSPPAG00000027737) ALS2 (ENSPPAG00000039038) MPP4 (ENSPPAG00000035730) TMEM237 (ENSPPAG00000030371) ENSPPAG00000042646 STRADB (ENSPPAG00000030005) ENSPPAG00000032863 #22 TRAK2 (ENSPPAG00000035936) FLACC1 (ENSPPAG00000012440) CASP8 (ENSPPAG00000030711) CASP10 (ENSPPAG00000042370) CFLAR (ENSPPAG00000027058) NDUFB3 (ENSPPAG00000040881) HYCC2 (ENSPPAG00000040686) ORC2 (ENSPPAG00000030211) NIF3L1 (ENSPPAG00000043491) PPIL3 (ENSPPAG00000039183) CLK1 (ENSPPAG00000036957) BZW1 (ENSPPAG00000027971) ENSPPAG00000030893 AOX1 (ENSPPAG00000000241) SGO2 (ENSPPAG00000000061) Chimpanzee MODERN SPECIES 15 FAM117B (ENSPTRG00000012821) BMPR2 (ENSPTRG00000029076) ENSPTRG00000047517 NOP58 (ENSPTRG00000012818) ENSPTRG00000012817 ENSPTRG00000049039 ENSPTRG00000050371 KIAA2012 (ENSPTRG00000012814) FZD7 (ENSPTRG00000049803) CDK15 (ENSPTRG00000012812) ALS2 (ENSPTRG00000012811) MPP4 (ENSPTRG00000012809) TMEM237 (ENSPTRG00000012808) C2CD6 (ENSPTRG00000012807) STRADB (ENSPTRG00000050289) ENSPTRG00000051730 #22 TRAK2 (ENSPTRG00000012804) FLACC1 (ENSPTRG00000012803) CASP8 (ENSPTRG00000012801) CASP10 (ENSPTRG00000012800) CFLAR (ENSPTRG00000012798) NDUFB3 (ENSPTRG00000012797) ENSPTRG00000032634 HYCC2 (ENSPTRG00000012796) ORC2 (ENSPTRG00000012795) NIF3L1 (ENSPTRG00000012794) PPIL3 (ENSPTRG00000012793) CLK1 (ENSPTRG00000012792) BZW1 (ENSPTRG00000012791) ENSPTRG00000044647 AOX1 (ENSPTRG00000012790) Gorilla MODERN SPECIES 15 BMPR2 (ENSGGOG00000010989) ENSGGOG00000042085 ENSGGOG00000014545 ENSGGOG00000026439 ENSGGOG00000007480 ENSGGOG00000027043 ENSGGOG00000025256 KIAA2012 (ENSGGOG00000010791) FZD7 (ENSGGOG00000040323) CDK15 (ENSGGOG00000028577) ALS2 (ENSGGOG00000015032) MPP4 (ENSGGOG00000015025) TMEM237 (ENSGGOG00000004720) C2CD6 (ENSGGOG00000012199) STRADB (ENSGGOG00000012183) ENSGGOG00000040945 #22 TRAK2 (ENSGGOG00000003014) FLACC1 (ENSGGOG00000000211) CASP8 (ENSGGOG00000000209) CASP10 (ENSGGOG00000012288) ENSGGOG00000042670 CFLAR (ENSGGOG00000010972) NDUFB3 (ENSGGOG00000023537) ENSGGOG00000022797 HYCC2 (ENSGGOG00000039554) ORC2 (ENSGGOG00000014070) NIF3L1 (ENSGGOG00000014060) PPIL3 (ENSGGOG00000022268) CLK1 (ENSGGOG00000016192) BZW1 (ENSGGOG00000016296) AOX1 (ENSGGOG00000006140) Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00950000183046.a.a ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.b ENSGT00390000000685.o.a ENSGT00950000183314 ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00910000148331 ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b Rhinopithecus ANCESTRAL SPECIES 83 ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00940000158202 ENSGT00910000147335 ENSGT00390000002219.e ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000163579 ENSGT00940000159722 ENSGT00390000012561.b Golden snub-nosed monkey MODERN SPECIES 2976 CDK15 (ENSRROG00000033373) ALS2 (ENSRROG00000042989) MPP4 (ENSRROG00000020037) TMEM237 (ENSRROG00000043593) C2CD6 (ENSRROG00000043775) STRADB (ENSRROG00000034956) ENSRROG00000040838 #22 TRAK2 (ENSRROG00000039077) Simiiformes ANCESTRAL SPECIES 4 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00910000147278 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Catarrhini ANCESTRAL SPECIES 4 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00910000147278 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 2 ENSCSAG00000003566 #7 ENSCSAG00000003561 NEDD1 (ENSCSAG00000003548) #10 ENSCSAG00000003543 TMPO (ENSCSAG00000003541) ##11 SLC25A3 (ENSCSAG00000003535) #12 IKBIP (ENSCSAG00000003532) #13 APAF1 (ENSCSAG00000003526) #14 ENSCSAG00000003515 #18 ENSCSAG00000003498 ENSCSAG00000003493 ENSCSAG00000003488 #18 GARIN6 (ENSCSAG00000003485) BLTP3B (ENSCSAG00000003481) #20 ACTR6 (ENSCSAG00000003476) #21 ENSCSAG00000003470 #22 ENSCSAG00000003466 #22 SLC17A8 (ENSCSAG00000003460) #23 NR1H4 (ENSCSAG00000003451) #24 GAS2L3 (ENSCSAG00000003446) #26 ANO4 (ENSCSAG00000003436) #27 SLC5A8 (ENSCSAG00000003405) #29 UTP20 (ENSCSAG00000003388) #30 ARL1 (ENSCSAG00000003368) #31 ENSCSAG00000003364 #32 MYBPC1 (ENSCSAG00000003356) #33 CHPT1 (ENSCSAG00000003350) #34 ENSCSAG00000003341 #35 GNPTAB (ENSCSAG00000003332) #36 DRAM1 (ENSCSAG00000003324) #37 WASHC3 (ENSCSAG00000003320) Vervet Monkey MODERN SPECIES 2 ENSCSAG00000003561 NEDD1 (ENSCSAG00000003548) #10 ENSCSAG00000003543 TMPO (ENSCSAG00000003541) ##11 SLC25A3 (ENSCSAG00000003535) #12 IKBIP (ENSCSAG00000003532) #13 APAF1 (ENSCSAG00000003526) #14 ENSCSAG00000003515 #18 ENSCSAG00000003498 ENSCSAG00000003493 ENSCSAG00000003488 #18 GARIN6 (ENSCSAG00000003485) BLTP3B (ENSCSAG00000003481) #20 ACTR6 (ENSCSAG00000003476) #21 ENSCSAG00000003470 #22 ENSCSAG00000003466 #22 SLC17A8 (ENSCSAG00000003460) #23 NR1H4 (ENSCSAG00000003451) #24 GAS2L3 (ENSCSAG00000003446) #26 ANO4 (ENSCSAG00000003436) #27 SLC5A8 (ENSCSAG00000003405) #29 UTP20 (ENSCSAG00000003388) #30 ARL1 (ENSCSAG00000003368) #31 ENSCSAG00000003364 #32 MYBPC1 (ENSCSAG00000003356) #33 CHPT1 (ENSCSAG00000003350) #34 ENSCSAG00000003341 #35 GNPTAB (ENSCSAG00000003332) #36 DRAM1 (ENSCSAG00000003324) #37 WASHC3 (ENSCSAG00000003320) NUP37 (ENSCSAG00000003314) Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 Macaca ANCESTRAL SPECIES 6 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 Macaca_a ANCESTRAL SPECIES 6 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00390000017580.`b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00910000148587 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00950000183123.g.a.b.b.r.b.b.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Crab-eating macaque MODERN SPECIES 2 ENSMFAG00000030299 ENSMFAG00000037885 #11 ENSMFAG00000055805 SLC25A3 (ENSMFAG00000000145) #12 ENSMFAG00000051788 #13 IKBIP (ENSMFAG00000045834) #13 APAF1 (ENSMFAG00000039197) #14 ANKS1B (ENSMFAG00000032660) #18 ENSMFAG00000062988 ENSMFAG00000049863 GARIN6 (ENSMFAG00000044311) BLTP3B (ENSMFAG00000010028) #20 ENSMFAG00000051648 ACTR6 (ENSMFAG00000040575) #21 ENSMFAG00000053279 SCYL2 (ENSMFAG00000028879) #22 SLC17A8 (ENSMFAG00000002114) #23 NR1H4 (ENSMFAG00000002236) #24 GAS2L3 (ENSMFAG00000003398) #26 ANO4 (ENSMFAG00000036524) #27 ENSMFAG00000031324 SLC5A8 (ENSMFAG00000031305) #29 UTP20 (ENSMFAG00000037766) #30 ARL1 (ENSMFAG00000035725) #31 ENSMFAG00000003748 #32 MYBPC1 (ENSMFAG00000038552) #33 CHPT1 (ENSMFAG00000045187) #34 SYCP3 (ENSMFAG00000037508) #35 GNPTAB (ENSMFAG00000038457) #36 ENSMFAG00000060846 DRAM1 (ENSMFAG00000042396) #37 Rhesus MODERN SPECIES 2 NEDD1 (ENSMMUG00000004093) #10 ENSMMUG00000001354 ENSMMUG00000063079 TMPO (ENSMMUG00000023719) #11 SLC25A3 (ENSMMUG00000023036) #12 IKBIP (ENSMMUG00000051674) #13 APAF1 (ENSMMUG00000022404) #14 ANKS1B (ENSMMUG00000022406) #18 ENSMMUG00000062511 ENSMMUG00000054350 GARIN6 (ENSMMUG00000002178) ENSMMUG00000058638 BLTP3B (ENSMMUG00000023601) #20 ENSMMUG00000063774 ACTR6 (ENSMMUG00000023603) #21 SCYL2 (ENSMMUG00000023600) #22 SLC17A8 (ENSMMUG00000017646) #23 NR1H4 (ENSMMUG00000003571) #24 GAS2L3 (ENSMMUG00000020360) #26 ANO4 (ENSMMUG00000018718) #27 ENSMMUG00000055254 SLC5A8 (ENSMMUG00000015134) #29 UTP20 (ENSMMUG00000012891) #30 ARL1 (ENSMMUG00000031610) #31 ENSMMUG00000061260 #32 MYBPC1 (ENSMMUG00000020875) #33 CHPT1 (ENSMMUG00000020877) #34 SYCP3 (ENSMMUG00000063989) #35 GNPTAB (ENSMMUG00000012562) #36 DRAM1 (ENSMMUG00000042077) #37 WASHC3 (ENSMMUG00000046478) Pig-tailed macaque MODERN SPECIES 206 LINGO2 (ENSMNEG00000014874) C9orf72 (ENSMNEG00000032167) MOB3B (ENSMNEG00000032479) EQTN (ENSMNEG00000012016) TEK (ENSMNEG00000036308) LRRC19 (ENSMNEG00000030147) IFT74 (ENSMNEG00000031183) PLAA (ENSMNEG00000026616) CAAP1 (ENSMNEG00000038989) ENSMNEG00000000447 BLTP3B (ENSMNEG00000036255) #20 ACTR6 (ENSMNEG00000045418) #21 SCYL2 (ENSMNEG00000039352) #22 SLC17A8 (ENSMNEG00000034787) #23 NR1H4 (ENSMNEG00000029077) #24 ENSMNEG00000034160 GAS2L3 (ENSMNEG00000043688) #26 ENSMNEG00000038922 ANO4 (ENSMNEG00000035796) #27 SLC5A8 (ENSMNEG00000044791) #29 UTP20 (ENSMNEG00000037418) #30 ENSMNEG00000030959 ENSMNEG00000010988 ARL1 (ENSMNEG00000007067) #31 ENSMNEG00000041759 #32 MYBPC1 (ENSMNEG00000030777) #33 CHPT1 (ENSMNEG00000021213) #34 ENSMNEG00000041521 #35 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 Cercopithecinae_d ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 Sooty mangabey MODERN SPECIES 406 HAL (ENSCATG00000016653) LTA4H (ENSCATG00000043659) ELK3 (ENSCATG00000035761) CDK17 (ENSCATG00000008799) CFAP54 (ENSCATG00000040097) NEDD1 (ENSCATG00000040561) #10 ENSCATG00000035402 ENSCATG00000037155 #11 SLC25A3 (ENSCATG00000042696) #12 IKBIP (ENSCATG00000039722) #13 APAF1 (ENSCATG00000042930) #14 GARIN6 (ENSCATG00000039282) ANKS1B (ENSCATG00000034542) #18 BLTP3B (ENSCATG00000035719) #20 ACTR6 (ENSCATG00000035115) #21 SCYL2 (ENSCATG00000028764) #22 SLC17A8 (ENSCATG00000043531) #23 NR1H4 (ENSCATG00000042241) #24 ENSCATG00000035203 GAS2L3 (ENSCATG00000040264) #26 ANO4 (ENSCATG00000039666) #27 SLC5A8 (ENSCATG00000021653) #29 UTP20 (ENSCATG00000035636) #30 ENSCATG00000020659 ARL1 (ENSCATG00000040389) #31 ENSCATG00000039921 #32 MYBPC1 (ENSCATG00000036055) #33 CHPT1 (ENSCATG00000040898) #34 ENSCATG00000041189 #35 GNPTAB (ENSCATG00000041157) #36 DRAM1 (ENSCATG00000034964) #37 Drill MODERN SPECIES 1084 ENSMLEG00000032476 ENSMLEG00000040746 #11 SLC25A3 (ENSMLEG00000030898) #12 IKBIP (ENSMLEG00000033117) #13 APAF1 (ENSMLEG00000036093) #14 GARIN6 (ENSMLEG00000041924) ANKS1B (ENSMLEG00000035476) #18 BLTP3B (ENSMLEG00000029606) #20 ACTR6 (ENSMLEG00000044194) #21 SCYL2 (ENSMLEG00000029042) #22 SLC17A8 (ENSMLEG00000039757) #23 Olive baboon MODERN SPECIES 19 CDK17 (ENSPANG00000023604) ENSPANG00000050074 ENSPANG00000044719 CFAP54 (ENSPANG00000035731) NEDD1 (ENSPANG00000023046) #10 ENSPANG00000019454 #11 ENSPANG00000018018 #12 IKBIP (ENSPANG00000009791) #13 APAF1 (ENSPANG00000011409) #14 ANKS1B (ENSPANG00000008710) #18 ENSPANG00000047895 GARIN6 (ENSPANG00000041130) ENSPANG00000049329 BLTP3B (ENSPANG00000005928) #20 ACTR6 (ENSPANG00000007907) #21 SCYL2 (ENSPANG00000015389) #22 SLC17A8 (ENSPANG00000004049) #23 NR1H4 (ENSPANG00000023009) #24 GAS2L3 (ENSPANG00000013394) #26 ANO4 (ENSPANG00000017946) #27 ENSPANG00000045224 SLC5A8 (ENSPANG00000006619) #29 ARL1 (ENSPANG00000018816) #31 UTP20 (ENSPANG00000020388) #30 ENSPANG00000018239 #32 ENSPANG00000045377 MYBPC1 (ENSPANG00000009790) #33 CHPT1 (ENSPANG00000004451) #34 SYCP3 (ENSPANG00000000419) #35 GNPTAB (ENSPANG00000000420) #36 ENSPANG00000049661 Rhinopithecus ANCESTRAL SPECIES 97 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.a.a.b.b ENSGT00720000108833 #21 ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.f.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Golden snub-nosed monkey MODERN SPECIES 2437 ENSRROG00000002184 #18 BLTP3B (ENSRROG00000035458) #20 ENSRROG00000033398 ACTR6 (ENSRROG00000042456) #21 SCYL2 (ENSRROG00000045785) #22 SLC17A8 (ENSRROG00000034592) #23 NR1H4 (ENSRROG00000040390) #24 ENSRROG00000033315 GAS2L3 (ENSRROG00000029219) #26 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 863 ENSRBIG00000032382 GARIN6 (ENSRBIG00000033826) ENSRBIG00000039980 ENSRBIG00000035139 #18 BLTP3B (ENSRBIG00000033336) #20 ENSRBIG00000031056 ACTR6 (ENSRBIG00000035135) #21 SCYL2 (ENSRBIG00000029723) #22 SLC17A8 (ENSRBIG00000027160) #23 NR1H4 (ENSRBIG00000033064) #24 ENSRBIG00000039933 GAS2L3 (ENSRBIG00000028898) #26 ANO4 (ENSRBIG00000030209) #27 SLC5A8 (ENSRBIG00000026396) #29 UTP20 (ENSRBIG00000025384) #30 ARL1 (ENSRBIG00000042560) #31 MYBPC1 (ENSRBIG00000005217) #33 CHPT1 (ENSRBIG00000042339) #34 SYCP3 (ENSRBIG00000031659) #35 SH3RF3 (ENSRBIG00000035937) SEPTIN10 (ENSRBIG00000039970) Black snub-nosed monkey MODERN SPECIES 71 ENSRBIG00000010556 STRADB (ENSRBIG00000039112) ENSRBIG00000034741 TRAK2 (ENSRBIG00000027774) ENSRBIG00000041242 #22 ENSRBIG00000016044 ENSRBIG00000041736 ENSRBIG00000021678 ENSRBIG00000029069 FLACC1 (ENSRBIG00000033862) ENSRBIG00000011046 CASP8 (ENSRBIG00000044586) ENSRBIG00000038761 CASP10 (ENSRBIG00000034022) CFLAR (ENSRBIG00000028528) NDUFB3 (ENSRBIG00000022999) HYCC2 (ENSRBIG00000031079) ORC2 (ENSRBIG00000033127) NIF3L1 (ENSRBIG00000024376) ENSRBIG00000038949 Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b.a.b ENSGT00390000000685.o.a ENSGT00940000154319.u.a.d ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390.a ENSGT00880000138031.i #22 ENSGT00880000138031.j #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00940000154156.d.n.b.b.b ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b Hominidae ANCESTRAL SPECIES 4 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Orangutan MODERN SPECIES 3 LTA4H (ENSPPYG00000004851) ELK3 (ENSPPYG00000004852) CDK17 (ENSPPYG00000004853) CFAP54 (ENSPPYG00000004855) NEDD1 (ENSPPYG00000004856) #10 ENSPPYG00000004857 #11 SLC25A3 (ENSPPYG00000004858) #12 IKBIP (ENSPPYG00000040489) #13 APAF1 (ENSPPYG00000004860) #14 ANKS1B (ENSPPYG00000004861) #18 ENSPPYG00000004862 BLTP3B (ENSPPYG00000004863) #20 ENSPPYG00000033741 ACTR6 (ENSPPYG00000004864) #21 ENSPPYG00000032292 SCYL2 (ENSPPYG00000004865) #22 SLC17A8 (ENSPPYG00000004866) #23 NR1H4 (ENSPPYG00000004867) #24 ENSPPYG00000040948 GAS2L3 (ENSPPYG00000004868) #26 ANO4 (ENSPPYG00000004869) #27 SLC5A8 (ENSPPYG00000004870) #29 UTP20 (ENSPPYG00000004871) #30 ENSPPYG00000004872 #31 SPIC (ENSPPYG00000004873) #32 MYBPC1 (ENSPPYG00000004874) #33 CHPT1 (ENSPPYG00000004875) #34 SYCP3 (ENSPPYG00000004876) #35 GNPTAB (ENSPPYG00000004877) #36 ENSPPYG00000037004 #37 WASHC3 (ENSPPYG00000004878) Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00950000183105.B.a.a.a.b ENSGT00910000147278 ENSGT00910000147996 ENSGT00940000163320 ENSGT00390000005569.x.a.a.a.b ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Gorilla MODERN SPECIES 3 ENSGGOG00000039481 ENSGGOG00000003388 #11 SLC25A3 (ENSGGOG00000015886) #12 IKBIP (ENSGGOG00000008397) #13 APAF1 (ENSGGOG00000008401) #14 ANKS1B (ENSGGOG00000008413) #18 ENSGGOG00000039927 ENSGGOG00000040544 ENSGGOG00000042686 GARIN6 (ENSGGOG00000028296) ENSGGOG00000040695 BLTP3B (ENSGGOG00000022523) #20 ENSGGOG00000023818 ACTR6 (ENSGGOG00000000854) #21 ENSGGOG00000010270 SCYL2 (ENSGGOG00000002948) #22 SLC17A8 (ENSGGOG00000016824) #23 NR1H4 (ENSGGOG00000008137) #24 GAS2L3 (ENSGGOG00000003196) #26 ENSGGOG00000038498 ANO4 (ENSGGOG00000000193) #27 SLC5A8 (ENSGGOG00000004017) #29 UTP20 (ENSGGOG00000004904) #30 ARL1 (ENSGGOG00000010788) #31 SPIC (ENSGGOG00000024597) #32 MYBPC1 (ENSGGOG00000010147) #33 CHPT1 (ENSGGOG00000007397) #34 SYCP3 (ENSGGOG00000002946) #35 GNPTAB (ENSGGOG00000009796) #36 ENSGGOG00000012314 DRAM1 (ENSGGOG00000003761) #37 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00950000183105.B.a.a.a.b ENSGT00910000147278 ENSGT00910000147996 ENSGT00940000163320 ENSGT00390000005569.x.a.a.a.b ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Human MODERN SPECIES 3 HAL (ENSG00000084110) LTA4H (ENSG00000111144) ELK3 (ENSG00000111145) CDK17 (ENSG00000059758) CFAP54 (ENSG00000188596) NEDD1 (ENSG00000139350) #10 TMPO (ENSG00000120802) ##11 SLC25A3 (ENSG00000075415) #12 IKBIP (ENSG00000166130) #13 APAF1 (ENSG00000120868) #14 ANKS1B (ENSG00000185046) #18 GARIN6 (ENSG00000180219) BLTP3B (ENSG00000111647) #20 ACTR6 (ENSG00000075089) #21 DEPDC4 (ENSG00000166153) SCYL2 (ENSG00000136021) #22 SLC17A8 (ENSG00000179520) #23 NR1H4 (ENSG00000012504) #24 GAS2L3 (ENSG00000139354) #26 ANO4 (ENSG00000151572) #27 SLC5A8 (ENSG00000256870) #29 UTP20 (ENSG00000120800) #30 ARL1 (ENSG00000120805) #31 SPIC (ENSG00000166211) #32 MYBPC1 (ENSG00000196091) #33 CHPT1 (ENSG00000111666) #34 SYCP3 (ENSG00000139351) #35 GNPTAB (ENSG00000111670) #36 DRAM1 (ENSG00000136048) #37 WASHC3 (ENSG00000120860) NUP37 (ENSG00000075188) Pan ANCESTRAL SPECIES 4 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00950000183105.B.a.a.a.b ENSGT00910000147278 ENSGT00910000147996 ENSGT00940000163320 ENSGT00390000005569.x.a.a.a.b ENSGT00600000084428.b #20 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031.j #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Bonobo MODERN SPECIES 3 ENSPPAG00000031102 #11 SLC25A3 (ENSPPAG00000029167) #12 IKBIP (ENSPPAG00000003106) #13 APAF1 (ENSPPAG00000031677) #14 ANKS1B (ENSPPAG00000026584) #18 ENSPPAG00000040891 ENSPPAG00000040779 ENSPPAG00000043599 ENSPPAG00000020393 GARIN6 (ENSPPAG00000031008) ENSPPAG00000042658 BLTP3B (ENSPPAG00000034670) #20 ENSPPAG00000035717 ACTR6 (ENSPPAG00000035162) #21 ENSPPAG00000033600 SCYL2 (ENSPPAG00000032245) #22 SLC17A8 (ENSPPAG00000041738) #23 NR1H4 (ENSPPAG00000027056) #24 GAS2L3 (ENSPPAG00000032303) #26 ENSPPAG00000042869 ANO4 (ENSPPAG00000037910) #27 SLC5A8 (ENSPPAG00000038189) #29 UTP20 (ENSPPAG00000001381) #30 ARL1 (ENSPPAG00000034860) #31 SPIC (ENSPPAG00000029437) #32 MYBPC1 (ENSPPAG00000027978) #33 ENSPPAG00000029593 #34 SYCP3 (ENSPPAG00000031232) #35 GNPTAB (ENSPPAG00000041156) #36 DRAM1 (ENSPPAG00000043812) #37 WASHC3 (ENSPPAG00000040130) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 3 ENSPTRG00000039568 TMPO (ENSPTRG00000005331) #11 SLC25A3 (ENSPTRG00000005333) #12 ENSPTRG00000005334 #13 APAF1 (ENSPTRG00000005335) #14 ANKS1B (ENSPTRG00000005336) #18 ENSPTRG00000044995 ENSPTRG00000046979 ENSPTRG00000043655 GARIN6 (ENSPTRG00000005338) ENSPTRG00000047093 BLTP3B (ENSPTRG00000005339) #20 ENSPTRG00000047818 ACTR6 (ENSPTRG00000005341) #21 DEPDC4 (ENSPTRG00000039541) SCYL2 (ENSPTRG00000051978) #22 SLC17A8 (ENSPTRG00000005344) #23 NR1H4 (ENSPTRG00000005345) #24 ENSPTRG00000051429 GAS2L3 (ENSPTRG00000005346) #26 ANO4 (ENSPTRG00000005347) #27 SLC5A8 (ENSPTRG00000005348) #29 UTP20 (ENSPTRG00000005349) #30 ARL1 (ENSPTRG00000005350) #31 SPIC (ENSPTRG00000005351) #32 MYBPC1 (ENSPTRG00000005353) #33 CHPT1 (ENSPTRG00000005354) #34 SYCP3 (ENSPTRG00000005355) #35 GNPTAB (ENSPTRG00000005356) #36 ENSPTRG00000031146 DRAM1 (ENSPTRG00000005357) #37 Chimpanzee MODERN SPECIES 520 ENSPTRG00000005343 #22 Gibbon DUPLICATION Gibbon MODERN SPECIES ZNF701 (ENSNLEG00000006043) ENSNLEG00000006045 ZNF611 (ENSNLEG00000006047) ZNF28 (ENSNLEG00000006051) ENSNLEG00000035292 ZNF468 (ENSNLEG00000027937) ZNF320 (ENSNLEG00000006053) ZNF888 (ENSNLEG00000030045) ZNF816 (ENSNLEG00000034515) ENSNLEG00000029357 ENSNLEG00000018769 ZNF160 (ENSNLEG00000032951) ZNF415 (ENSNLEG00000027833) ZNF347 (ENSNLEG00000006065) ENSNLEG00000030103 SCYL2 (ENSNLEG00000006068) #22 SLC17A8 (ENSNLEG00000006078) #23 NR1H4 (ENSNLEG00000006093) #24 GAS2L3 (ENSNLEG00000006116) #26 ENSNLEG00000028974 ANO4 (ENSNLEG00000006128) #27 ENSNLEG00000032249 SLC5A8 (ENSNLEG00000006157) #29 UTP20 (ENSNLEG00000006166) #30 ARL1 (ENSNLEG00000006223) #31 SPIC (ENSNLEG00000006232) #32 MYBPC1 (ENSNLEG00000006235) #33 CHPT1 (ENSNLEG00000006332) #34 SYCP3 (ENSNLEG00000006341) #35 GNPTAB (ENSNLEG00000006356) #36 DRAM1 (ENSNLEG00000006362) #37 Gibbon MODERN SPECIES 14 ENSNLEG00000029928 ENSNLEG00000007009 BMPR2 (ENSNLEG00000007004) ENSNLEG00000031345 NOP58 (ENSNLEG00000007000) SUMO1 (ENSNLEG00000006997) KIAA2012 (ENSNLEG00000006992) FZD7 (ENSNLEG00000035997) CDK15 (ENSNLEG00000006990) ALS2 (ENSNLEG00000006980) MPP4 (ENSNLEG00000006977) TMEM237 (ENSNLEG00000006974) ENSNLEG00000006972 ENSNLEG00000034127 STRADB (ENSNLEG00000006967) ENSNLEG00000033546 #22 TRAK2 (ENSNLEG00000006960) FLACC1 (ENSNLEG00000006956) CASP8 (ENSNLEG00000032856) CASP10 (ENSNLEG00000006951) ENSNLEG00000030686 CFLAR (ENSNLEG00000006947) NDUFB3 (ENSNLEG00000006946) HYCC2 (ENSNLEG00000006941) ORC2 (ENSNLEG00000006938) NIF3L1 (ENSNLEG00000006935) PPIL3 (ENSNLEG00000034236) CLK1 (ENSNLEG00000032526) BZW1 (ENSNLEG00000006929) ENSNLEG00000029066 AOX1 (ENSNLEG00000006920) Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000005530.a.a ENSGT00950000183046.a.a ENSGT00390000010308.cb.b ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390 ENSGT00880000138031.j #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b ENSGT00940000154107.b Mas night monkey MODERN SPECIES 357 FAM117B (ENSANAG00000032237) ENSANAG00000029164 BMPR2 (ENSANAG00000029511) ENSANAG00000037788 NOP58 (ENSANAG00000037044) ENSANAG00000033069 KIAA2012 (ENSANAG00000029179) FZD7 (ENSANAG00000017245) CDK15 (ENSANAG00000037266) ALS2 (ENSANAG00000037290) MPP4 (ENSANAG00000033861) TMEM237 (ENSANAG00000019897) ENSANAG00000024913 STRADB (ENSANAG00000027419) TRAK2 (ENSANAG00000026933) ENSANAG00000020277 #22 ENSANAG00000020470 FLACC1 (ENSANAG00000028497) ENSANAG00000021926 CASP8 (ENSANAG00000028822) CASP10 (ENSANAG00000018072) CFLAR (ENSANAG00000024537) ENSANAG00000022594 ENSANAG00000022986 ORC2 (ENSANAG00000029403) NIF3L1 (ENSANAG00000026731) Cebidae ANCESTRAL SPECIES 11 ENSGT00390000005530.a.a ENSGT00950000183046.a.a ENSGT00390000010308.cb.b ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390 ENSGT00880000138031.j #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b ENSGT00940000154107.b Cebidae_a ANCESTRAL SPECIES 16 ENSGT00390000005530.a.a ENSGT00950000183046.a.a ENSGT00390000010308.cb.b ENSGT00940000156449 ENSGT00390000008128.c.a.a ENSGT00940000153534.A ENSGT00940000154319.u.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390 ENSGT00880000138031.j #22 ENSGT00940000158202 ENSGT00400000022323 ENSGT00390000007552.f.w.b ENSGT00940000160319 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316.j.a ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.b Bolivian squirrel monkey MODERN SPECIES 56 ENSSBOG00000016073 BMPR2 (ENSSBOG00000025318) ENSSBOG00000029881 NOP58 (ENSSBOG00000020494) ENSSBOG00000030624 KIAA2012 (ENSSBOG00000034494) FZD7 (ENSSBOG00000013896) CDK15 (ENSSBOG00000023266) ALS2 (ENSSBOG00000026070) MPP4 (ENSSBOG00000032446) TMEM237 (ENSSBOG00000028677) C2CD6 (ENSSBOG00000024027) ENSSBOG00000022018 STRADB (ENSSBOG00000028914) TRAK2 (ENSSBOG00000027410) ENSSBOG00000024387 #22 FLACC1 (ENSSBOG00000032227) CASP8 (ENSSBOG00000027346) ENSSBOG00000021837 CASP10 (ENSSBOG00000023212) CFLAR (ENSSBOG00000020876) NDUFB3 (ENSSBOG00000023814) HYCC2 (ENSSBOG00000033197) ENSSBOG00000025751 NIF3L1 (ENSSBOG00000034561) ENSSBOG00000028593 CLK1 (ENSSBOG00000031614) BZW1 (ENSSBOG00000020710) ENSSBOG00000034034 AOX1 (ENSSBOG00000032424) SGO2 (ENSSBOG00000035222) Tarsier MODERN SPECIES 5602 BLTP3B (ENSTSYG00000006935) #20 ACTR6 (ENSTSYG00000009834) #21 ENSTSYG00000012935 SCYL2 (ENSTSYG00000013692) #22 SLC17A8 (ENSTSYG00000001910) #23 NR1H4 (ENSTSYG00000002997) #24 GAS2L3 (ENSTSYG00000011057) #26 ENSTSYG00000030797 ENSTSYG00000030168 ANO4 (ENSTSYG00000012244) #27 SLC5A8 (ENSTSYG00000011242) #29 UTP20 (ENSTSYG00000003040) #30 Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 29 LTA4H (ENSMICG00000012198) ELK3 (ENSMICG00000012211) CDK17 (ENSMICG00000005540) CFAP54 (ENSMICG00000015286) NEDD1 (ENSMICG00000015320) #10 ENSMICG00000031893 #11 SLC25A3 (ENSMICG00000045036) #12 IKBIP (ENSMICG00000026540) #13 ENSMICG00000003528 #14 ENSMICG00000032726 GARIN6 (ENSMICG00000030013) ANKS1B (ENSMICG00000003540) #18 BLTP3B (ENSMICG00000010210) #20 ENSMICG00000016393 #21 DEPDC4 (ENSMICG00000016407) ENSMICG00000016414 #22 SLC17A8 (ENSMICG00000001586) #23 NR1H4 (ENSMICG00000013522) #24 GAS2L3 (ENSMICG00000042318) #26 ENSMICG00000030149 ENSMICG00000047865 #27 SLC5A8 (ENSMICG00000029503) #29 UTP20 (ENSMICG00000015736) #30 ARL1 (ENSMICG00000015801) #31 SPIC (ENSMICG00000044168) #32 MYBPC1 (ENSMICG00000012018) #33 CHPT1 (ENSMICG00000012038) #34 SYCP3 (ENSMICG00000046057) #35 GNPTAB (ENSMICG00000012048) #36 DRAM1 (ENSMICG00000012068) #37 WASHC3 (ENSMICG00000002612) Mouse lemur MODERN SPECIES 20 CENPE (ENSMICG00000005101) TACR3 (ENSMICG00000046253) ENSMICG00000042331 #22 CXXC4 (ENSMICG00000045183) TET2 (ENSMICG00000035595) ENSMICG00000013570 ENSMICG00000047313 ENSMICG00000010754 INTS12 (ENSMICG00000010760) GSTCD (ENSMICG00000030887) NPNT (ENSMICG00000010776) TBCK (ENSMICG00000010786) AIMP1 (ENSMICG00000010202) GIMD1 (ENSMICG00000045116) DKK2 (ENSMICG00000027157) ENSMICG00000017692 PAPSS1 (ENSMICG00000016262) SGMS2 (ENSMICG00000008740) Lemuriformes_a ANCESTRAL SPECIES 47 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572.`c #18 ENSGT00940000163320 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Coquerels sifaka MODERN SPECIES 968 LTA4H (ENSPCOG00000016371) ELK3 (ENSPCOG00000003335) CDK17 (ENSPCOG00000014977) CFAP54 (ENSPCOG00000024189) NEDD1 (ENSPCOG00000022969) #10 ENSPCOG00000027549 #11 SLC25A3 (ENSPCOG00000014902) #12 IKBIP (ENSPCOG00000027241) #13 APAF1 (ENSPCOG00000020485) #14 GARIN6 (ENSPCOG00000022737) ANKS1B (ENSPCOG00000020608) #18 BLTP3B (ENSPCOG00000018808) #20 ENSPCOG00000002696 #21 ENSPCOG00000002628 #21 DEPDC4 (ENSPCOG00000000868) SCYL2 (ENSPCOG00000020693) #22 SLC17A8 (ENSPCOG00000016839) #23 NR1H4 (ENSPCOG00000018446) #24 ANO4 (ENSPCOG00000026667) #27 SLC5A8 (ENSPCOG00000016441) #29 Greater bamboo lemur MODERN SPECIES 735 ENSPSMG00000016116 #11 SLC25A3 (ENSPSMG00000016005) #12 IKBIP (ENSPSMG00000015923) #13 APAF1 (ENSPSMG00000015780) #14 GARIN6 (ENSPSMG00000015346) ANKS1B (ENSPSMG00000014986) #18 BLTP3B (ENSPSMG00000014572) #20 ACTR6 (ENSPSMG00000014479) #21 DEPDC4 (ENSPSMG00000014424) SCYL2 (ENSPSMG00000014364) #22 SLC17A8 (ENSPSMG00000014214) #23 NR1H4 (ENSPSMG00000014187) #24 GAS2L3 (ENSPSMG00000014137) #26 ANO4 (ENSPSMG00000014062) #27 SLC5A8 (ENSPSMG00000013925) #29 UTP20 (ENSPSMG00000013883) #30 ARL1 (ENSPSMG00000013774) #31 SPIC (ENSPSMG00000013707) #32 MYBPC1 (ENSPSMG00000013038) #33 CHPT1 (ENSPSMG00000012658) #34 SYCP3 (ENSPSMG00000012646) #35 GNPTAB (ENSPSMG00000012631) #36 DRAM1 (ENSPSMG00000012608) #37 WASHC3 (ENSPSMG00000012602) NUP37 (ENSPSMG00000012590) Bushbaby MODERN SPECIES 122 ENSOGAG00000024990 ENSOGAG00000005823 NEDD1 (ENSOGAG00000005824) #10 ENSOGAG00000012220 #11 SLC25A3 (ENSOGAG00000012222) #12 ENSOGAG00000028619 #13 IKBIP (ENSOGAG00000012226) #13 APAF1 (ENSOGAG00000012229) #14 ENSOGAG00000025146 #18 GARIN6 (ENSOGAG00000006412) ANKS1B (ENSOGAG00000012239) #18 BLTP3B (ENSOGAG00000001738) #20 ACTR6 (ENSOGAG00000001741) #21 ENSOGAG00000026542 DEPDC4 (ENSOGAG00000026205) SCYL2 (ENSOGAG00000007862) #22 SLC17A8 (ENSOGAG00000007870) #23 NR1H4 (ENSOGAG00000007874) #24 GAS2L3 (ENSOGAG00000003680) #26 ANO4 (ENSOGAG00000015111) #27 SLC5A8 (ENSOGAG00000015120) #29 ENSOGAG00000026488 UTP20 (ENSOGAG00000015130) #30 ARL1 (ENSOGAG00000015144) #31 SPIC (ENSOGAG00000015148) #32 MYBPC1 (ENSOGAG00000001204) #33 CHPT1 (ENSOGAG00000001207) #34 SYCP3 (ENSOGAG00000024543) #35 GNPTAB (ENSOGAG00000012576) #36 DRAM1 (ENSOGAG00000003318) #37 WASHC3 (ENSOGAG00000003322) Atlantogenata ANCESTRAL SPECIES 16 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Afrotheria ANCESTRAL SPECIES 8 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Tenrec MODERN SPECIES 3633 SCYL2 (ENSETEG00000018592) #22 SLC17A8 (ENSETEG00000018596) #23 Afrotheria_a ANCESTRAL SPECIES 8 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164546 ENSGT00390000001561 #10 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Hyrax MODERN SPECIES 2592 SCYL2 (ENSPCAG00000012175) #22 Elephant MODERN SPECIES 196 LTA4H (ENSLAFG00000009821) ELK3 (ENSLAFG00000004269) CDK17 (ENSLAFG00000004270) ENSLAFG00000002765 #7 ENSLAFG00000005062 NEDD1 (ENSLAFG00000006312) #10 ENSLAFG00000014311 #11 SLC25A3 (ENSLAFG00000002007) #12 IKBIP (ENSLAFG00000014642) #13 APAF1 (ENSLAFG00000014645) #14 ANKS1B (ENSLAFG00000014651) #18 ENSLAFG00000014660 BLTP3B (ENSLAFG00000001375) #20 ACTR6 (ENSLAFG00000001011) #21 ENSLAFG00000011615 SCYL2 (ENSLAFG00000012773) #22 SLC17A8 (ENSLAFG00000011364) #23 NR1H4 (ENSLAFG00000009154) #24 GAS2L3 (ENSLAFG00000012363) #26 ANO4 (ENSLAFG00000002161) #27 SLC5A8 (ENSLAFG00000002166) #29 UTP20 (ENSLAFG00000012983) #30 ARL1 (ENSLAFG00000026143) #31 SPIC (ENSLAFG00000015661) #32 MYBPC1 (ENSLAFG00000004666) #33 ENSLAFG00000027866 CHPT1 (ENSLAFG00000004678) #34 GNPTAB (ENSLAFG00000004687) #36 DRAM1 (ENSLAFG00000004688) #37 WASHC3 (ENSLAFG00000007850) NUP37 (ENSLAFG00000002001) Xenarthra ANCESTRAL SPECIES 406 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 Sloth MODERN SPECIES 2875 SCYL2 (ENSCHOG00000007832) #22 Armadillo MODERN SPECIES 2626 ENSDNOG00000038990 #18 BLTP3B (ENSDNOG00000013742) #20 ENSDNOG00000031633 #21 SCYL2 (ENSDNOG00000010714) #22 SLC17A8 (ENSDNOG00000010749) #23 NR1H4 (ENSDNOG00000047912) #24 GAS2L3 (ENSDNOG00000038024) #26 ANO4 (ENSDNOG00000002734) #27 SLC5A8 (ENSDNOG00000037439) #29 UTP20 (ENSDNOG00000016845) #30 SPIC (ENSDNOG00000047193) #32 MYBPC1 (ENSDNOG00000014718) #33 ENSDNOG00000040949 #35 ENSDNOG00000017624 #35 ENSDNOG00000006260 #35 Marsupialia ANCESTRAL SPECIES 11 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00490000043421 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f #29 ENSGT00940000155166.A.e.b.a #29 ENSGT00940000155166.A.e.b.b #29 ENSGT00940000155166.A.e.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 Marsupialia_b ANCESTRAL SPECIES 13 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00490000043421 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f.a #29 ENSGT00940000155166.A.e.b.a #29 ENSGT00940000155166.A.e.b.b #29 ENSGT00940000155166.A.e.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 Diprotodontia ANCESTRAL SPECIES 8 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00490000043421 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f.a #29 ENSGT00940000155166.A.e.b.a #29 ENSGT00940000155166.A.e.b.b #29 ENSGT00940000155166.A.e.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 Diprotodontia_a ANCESTRAL SPECIES 8 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00490000043421 ENSGT00940000154098.a.d #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f.a #29 ENSGT00940000155166.A.e.b.a #29 ENSGT00940000155166.A.e.b.b #29 ENSGT00940000155166.A.e.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 Common wonbat MODERN SPECIES 711 LTA4H (ENSVURG00010024166) ELK3 (ENSVURG00010024163) CDK17 (ENSVURG00010024156) ENSVURG00010024149 NEDD1 (ENSVURG00010024144) #10 ENSVURG00010024138 ENSVURG00010024136 #11 ENSVURG00010024128 #12 IKBIP (ENSVURG00010024126) #13 APAF1 (ENSVURG00010024119) #14 ENSVURG00010024112 #18 ENSVURG00010024110 #18 BLTP3B (ENSVURG00010024101) #20 ACTR6 (ENSVURG00010024098) #21 DEPDC4 (ENSVURG00010024097) SCYL2 (ENSVURG00010024095) #22 SLC17A8 (ENSVURG00010024093) #23 NR1H4 (ENSVURG00010024089) #24 GAS2L3 (ENSVURG00010024084) #26 ANO4 (ENSVURG00010024083) #27 ENSVURG00010024081 ENSVURG00010024079 ENSVURG00010024076 #29 ENSVURG00010024069 #29 ENSVURG00010024066 #29 ENSVURG00010024065 #29 UTP20 (ENSVURG00010024063) #30 ENSVURG00010024062 #31 SPIC (ENSVURG00010024061) #32 MYBPC1 (ENSVURG00010024011) #33 CHPT1 (ENSVURG00010023991) #34 koala MODERN SPECIES 13 SCYL2 (ENSPCIG00000021110) #22 SLC17A8 (ENSPCIG00000031571) #23 NR1H4 (ENSPCIG00000010847) #24 GAS2L3 (ENSPCIG00000010848) #26 ANO4 (ENSPCIG00000008989) #27 ENSPCIG00000009002 #29 ENSPCIG00000009010 #29 ENSPCIG00000009014 #29 ENSPCIG00000009029 #29 ENSPCIG00000036133 UTP20 (ENSPCIG00000009298) #30 ENSPCIG00000009683 #31 SPIC (ENSPCIG00000033679) #32 MYBPC1 (ENSPCIG00000026251) #33 CHPT1 (ENSPCIG00000009695) #34 GNPTAB (ENSPCIG00000009742) #36 Wallaby MODERN SPECIES 7317 SCYL2 (ENSMEUG00000000017) #22 Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES 3 ENSSHAG00000020473 TOMM40L (ENSSHAG00000025984) NR1I3 (ENSSHAG00000016687) MPZ (ENSSHAG00000027075) SDHC (ENSSHAG00000025062) ENSSHAG00000016974 ENSSHAG00000009793 RAB3GAP2 (ENSSHAG00000005770) IARS2 (ENSSHAG00000004762) BPNT1 (ENSSHAG00000004030) ENSSHAG00000021786 ENSSHAG00000002391 ENSSHAG00000021668 ENSSHAG00000023075 ENSSHAG00000029940 ENSSHAG00000026841 #22 ENSSHAG00000022431 ENSSHAG00000018298 TGFB2 (ENSSHAG00000017613) RRP15 (ENSSHAG00000017509) ENSSHAG00000015894 GPATCH2 (ENSSHAG00000015123) ESRRG (ENSSHAG00000010535) ENSSHAG00000028582 KCTD3 (ENSSHAG00000018757) KCNK2 (ENSSHAG00000018337) ENSSHAG00000017822 PTPN14 (ENSSHAG00000017396) SMYD2 (ENSSHAG00000017288) PROX1 (ENSSHAG00000030877) RPS6KC1 (ENSSHAG00000013922) Tasmanian devil MODERN SPECIES 4 HAL (ENSSHAG00000012778) LTA4H (ENSSHAG00000012983) ELK3 (ENSSHAG00000030924) CDK17 (ENSSHAG00000014275) ENSSHAG00000023875 NEDD1 (ENSSHAG00000016136) #10 ENSSHAG00000026704 ENSSHAG00000023115 #11 SLC25A3 (ENSSHAG00000021483) #12 IKBIP (ENSSHAG00000026418) #13 APAF1 (ENSSHAG00000011224) #14 ANKS1B (ENSSHAG00000011922) #18 BLTP3B (ENSSHAG00000009939) #20 ACTR6 (ENSSHAG00000010695) #21 DEPDC4 (ENSSHAG00000010896) ENSSHAG00000011140 #22 SLC17A8 (ENSSHAG00000011526) #23 NR1H4 (ENSSHAG00000012333) #24 GAS2L3 (ENSSHAG00000030333) #26 ANO4 (ENSSHAG00000014385) #27 ENSSHAG00000014997 #29 ENSSHAG00000027838 #29 ENSSHAG00000004549 #29 UTP20 (ENSSHAG00000002298) #30 ARL1 (ENSSHAG00000028502) #31 SPIC (ENSSHAG00000005809) #32 MYBPC1 (ENSSHAG00000007093) #33 CHPT1 (ENSSHAG00000008105) #34 ENSSHAG00000008390 #35 GNPTAB (ENSSHAG00000008757) #36 DRAM1 (ENSSHAG00000030339) #37 Opossum MODERN SPECIES 7 NEDD1 (ENSMODG00000007794) #10 ENSMODG00000046019 ENSMODG00000046160 ENSMODG00000007728 ENSMODG00000007723 #11 SLC25A3 (ENSMODG00000007717) #12 IKBIP (ENSMODG00000007700) #13 APAF1 (ENSMODG00000007679) #14 ENSMODG00000040381 #18 ENSMODG00000007596 #18 ENSMODG00000039312 ENSMODG00000029538 BLTP3B (ENSMODG00000005181) #20 ACTR6 (ENSMODG00000005122) #21 DEPDC4 (ENSMODG00000005106) SCYL2 (ENSMODG00000005075) #22 ENSMODG00000005023 #23 NR1H4 (ENSMODG00000004996) #24 GAS2L3 (ENSMODG00000004973) #26 ANO4 (ENSMODG00000004966) #27 ENSMODG00000031558 #29 ENSMODG00000004821 #29 ENSMODG00000042882 ENSMODG00000024997 ENSMODG00000024996 ENSMODG00000029070 ENSMODG00000027631 #29 ENSMODG00000028414 #29 ENSMODG00000045282 ENSMODG00000027964 #29 ENSMODG00000003207 #29 Platypus MODERN SPECIES 5 AMDHD1 (ENSOANG00000006610) HAL (ENSOANG00000006609) LTA4H (ENSOANG00000006608) ELK3 (ENSOANG00000006606) CDK17 (ENSOANG00000006604) CFAP54 (ENSOANG00000006601) NEDD1 (ENSOANG00000006600) #10 ENSOANG00000005595 #11 SLC25A3 (ENSOANG00000005594) #12 IKBIP (ENSOANG00000005593) #13 APAF1 (ENSOANG00000005592) #14 ANKS1B (ENSOANG00000020004) #18 BLTP3B (ENSOANG00000005589) #20 ACTR6 (ENSOANG00000041905) #21 DEPDC4 (ENSOANG00000005587) SCYL2 (ENSOANG00000005585) #22 SLC17A8 (ENSOANG00000005584) #23 NR1H4 (ENSOANG00000005583) #24 GAS2L3 (ENSOANG00000050205) #26 ANO4 (ENSOANG00000005581) #27 SLC5A8 (ENSOANG00000020001) #29 UTP20 (ENSOANG00000005578) #30 ARL1 (ENSOANG00000043677) #31 SPIC (ENSOANG00000042898) #32 MYBPC1 (ENSOANG00000005576) #33 CHPT1 (ENSOANG00000005575) #34 ENSOANG00000029439 #35 GNPTAB (ENSOANG00000005574) #36 ENSOANG00000005573 #37 ENSOANG00000051045 #37 WASHC3 (ENSOANG00000005571) Sauria ANCESTRAL SPECIES 4 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 Archelosauria ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 Archosauria ANCESTRAL SPECIES 4 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000013192 Aves ANCESTRAL SPECIES 1 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Neognathae ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Neognathae_b ANCESTRAL SPECIES 2 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Neognathae_c ANCESTRAL SPECIES ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000014089 ENSGT00940000160916.l ENSGT00390000013260.C Golden eagle MODERN SPECIES 18 HAL (ENSACCG00020014818) LTA4H (ENSACCG00020014249) ELK3 (ENSACCG00020013689) CDK17 (ENSACCG00020013655) ENSACCG00020013596 #7 NEDD1 (ENSACCG00020013535) #10 ENSACCG00020013470 #11 SLC25A3 (ENSACCG00020013400) #12 ENSACCG00020013382 #13 APAF1 (ENSACCG00020013335) #14 ANKS1B (ENSACCG00020013285) #18 ENSACCG00020013250 #18 BLTP3B (ENSACCG00020013229) #20 ACTR6 (ENSACCG00020013203) #21 DEPDC4 (ENSACCG00020013173) SCYL2 (ENSACCG00020013065) #22 SLC17A8 (ENSACCG00020013028) #23 NR1H4 (ENSACCG00020012997) #24 GAS2L3 (ENSACCG00020012971) #26 ANO4 (ENSACCG00020012906) #27 SLC5A8 (ENSACCG00020012758) #29 ENSACCG00020012734 UTP20 (ENSACCG00020012635) #30 ARL1 (ENSACCG00020012587) #31 NUP205 (ENSACCG00020012515) CNOT4 (ENSACCG00020012409) ENSACCG00020012298 STRA8 (ENSACCG00020012231) WDR91 (ENSACCG00020012149) ENSACCG00020012037 ENSACCG00020012013 Kakapo MODERN SPECIES 20 HAL (ENSSHBG00005011156) LTA4H (ENSSHBG00005011211) ELK3 (ENSSHBG00005011236) CDK17 (ENSSHBG00005011290) ENSSHBG00005011363 #7 NEDD1 (ENSSHBG00005011402) #10 ENSSHBG00005011461 #11 SLC25A3 (ENSSHBG00005011520) #12 ENSSHBG00005011552 #13 APAF1 (ENSSHBG00005011721) #14 ANKS1B (ENSSHBG00005013879) #18 ENSSHBG00005013920 #18 BLTP3B (ENSSHBG00005013937) #20 ACTR6 (ENSSHBG00005013997) #21 DEPDC4 (ENSSHBG00005014022) SCYL2 (ENSSHBG00005014083) #22 SLC17A8 (ENSSHBG00005014121) #23 NR1H4 (ENSSHBG00005014142) #24 GAS2L3 (ENSSHBG00005014176) #26 ANO4 (ENSSHBG00005014268) #27 SLC5A8 (ENSSHBG00005014710) #29 UTP20 (ENSSHBG00005014746) #30 ARL1 (ENSSHBG00005014774) #31 NUP205 (ENSSHBG00005014780) CNOT4 (ENSSHBG00005014812) ENSSHBG00005014858 STRA8 (ENSSHBG00005014918) WDR91 (ENSSHBG00005014937) TMEM140 (ENSSHBG00005014987) AGBL3 (ENSSHBG00005014994) ENSSHBG00005015009 Passeriformes ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Great tit MODERN SPECIES 10 AMDHD1 (ENSPMJG00000012902) HAL (ENSPMJG00000012906) LTA4H (ENSPMJG00000012909) ELK3 (ENSPMJG00000012914) CDK17 (ENSPMJG00000012917) CFAP54 (ENSPMJG00000012922) ENSPMJG00000012926 ENSPMJG00000012936 #11 SLC25A3 (ENSPMJG00000012937) #12 IKBIP (ENSPMJG00000012939) #13 APAF1 (ENSPMJG00000012940) #14 ANKS1B (ENSPMJG00000012949) #18 BLTP3B (ENSPMJG00000013212) #20 ACTR6 (ENSPMJG00000013213) #21 DEPDC4 (ENSPMJG00000013214) SCYL2 (ENSPMJG00000013215) #22 SLC17A8 (ENSPMJG00000013223) #23 NR1H4 (ENSPMJG00000013226) #24 GAS2L3 (ENSPMJG00000013227) #26 ANO4 (ENSPMJG00000013228) #27 SLC5A8 (ENSPMJG00000013229) #29 UTP20 (ENSPMJG00000013230) #30 ARL1 (ENSPMJG00000013232) #31 NUP205 (ENSPMJG00000013233) CNOT4 (ENSPMJG00000013234) ENSPMJG00000013235 STRA8 (ENSPMJG00000013236) WDR91 (ENSPMJG00000013237) ENSPMJG00000013249 ENSPMJG00000013250 ENSPMJG00000000057 Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Passeroidea ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Zebra finch MODERN SPECIES 11 AMDHD1 (ENSTGUG00000008491) HAL (ENSTGUG00000008503) LTA4H (ENSTGUG00000008539) ELK3 (ENSTGUG00000008619) CDK17 (ENSTGUG00000008629) CFAP54 (ENSTGUG00000008665) ENSTGUG00000008696 ENSTGUG00000008719 #11 SLC25A3 (ENSTGUG00000020418) #12 IKBIP (ENSTGUG00000023025) #13 APAF1 (ENSTGUG00000008761) #14 ANKS1B (ENSTGUG00000008843) #18 BLTP3B (ENSTGUG00000008861) #20 ACTR6 (ENSTGUG00000008877) #21 DEPDC4 (ENSTGUG00000008896) SCYL2 (ENSTGUG00000008908) #22 SLC17A8 (ENSTGUG00000008937) #23 NR1H4 (ENSTGUG00000008977) #24 ANO4 (ENSTGUG00000009008) #27 SLC5A8 (ENSTGUG00000009037) #29 UTP20 (ENSTGUG00000009053) #30 ARL1 (ENSTGUG00000009085) #31 NUP205 (ENSTGUG00000009105) CNOT4 (ENSTGUG00000009161) ENSTGUG00000009170 STRA8 (ENSTGUG00000009183) WDR91 (ENSTGUG00000009190) ENSTGUG00000021985 TMEM140 (ENSTGUG00000026726) PDE6H (ENSTGUG00000024354) ERP27 (ENSTGUG00000009231) Common canary MODERN SPECIES 6 LTA4H (ENSSCAG00000007065) ELK3 (ENSSCAG00000007062) CDK17 (ENSSCAG00000007054) ENSSCAG00000007043 #7 ENSSCAG00000007029 ENSSCAG00000007014 #11 SLC25A3 (ENSSCAG00000007005) #12 IKBIP (ENSSCAG00000007000) #13 APAF1 (ENSSCAG00000006979) #14 ENSSCAG00000006967 #18 ENSSCAG00000006954 #18 ENSSCAG00000006950 #18 BLTP3B (ENSSCAG00000006936) #20 ACTR6 (ENSSCAG00000006930) #21 DEPDC4 (ENSSCAG00000006924) SCYL2 (ENSSCAG00000006917) #22 SLC17A8 (ENSSCAG00000006910) #23 NR1H4 (ENSSCAG00000006898) #24 GAS2L3 (ENSSCAG00000006890) #26 ANO4 (ENSSCAG00000006863) #27 SLC5A8 (ENSSCAG00000006787) #29 UTP20 (ENSSCAG00000006736) #30 ARL1 (ENSSCAG00000006726) #31 NUP205 (ENSSCAG00000006709) CNOT4 (ENSSCAG00000006689) ENSSCAG00000006686 ENSSCAG00000006681 STRA8 (ENSSCAG00000006667) WDR91 (ENSSCAG00000006558) TMEM140 (ENSSCAG00000006537) PDE6H (ENSSCAG00000006530) Medium ground finch MODERN SPECIES 34 AMDHD1 (ENSGFOG00000001741) HAL (ENSGFOG00000001801) LTA4H (ENSGFOG00000002021) ELK3 (ENSGFOG00000002881) CDK17 (ENSGFOG00000002895) ENSGFOG00000002961 ENSGFOG00000003002 ENSGFOG00000003032 #11 SLC25A3 (ENSGFOG00000003080) #12 IKBIP (ENSGFOG00000003453) #13 APAF1 (ENSGFOG00000003470) #14 ANKS1B (ENSGFOG00000003511) #18 BLTP3B (ENSGFOG00000003544) #20 ACTR6 (ENSGFOG00000003578) #21 DEPDC4 (ENSGFOG00000003594) SCYL2 (ENSGFOG00000003619) #22 SLC17A8 (ENSGFOG00000003682) #23 NR1H4 (ENSGFOG00000003720) #24 GAS2L3 (ENSGFOG00000003760) #26 ANO4 (ENSGFOG00000003787) #27 SLC5A8 (ENSGFOG00000003842) #29 UTP20 (ENSGFOG00000003934) #30 ARL1 (ENSGFOG00000004261) #31 ENSGFOG00000004268 ENSGFOG00000004283 CNOT4 (ENSGFOG00000004330) ENSGFOG00000004355 STRA8 (ENSGFOG00000004416) WDR91 (ENSGFOG00000004456) ENSGFOG00000004651 TMEM140 (ENSGFOG00000004663) Flycatcher MODERN SPECIES 10 ENSFALG00000010866 ENSFALG00000027964 ELK3 (ENSFALG00000010890) CDK17 (ENSFALG00000010898) ENSFALG00000027198 #7 ENSFALG00000023041 ENSFALG00000010924 ENSFALG00000010958 #11 SLC25A3 (ENSFALG00000026978) #12 IKBIP (ENSFALG00000010992) #13 APAF1 (ENSFALG00000010994) #14 ANKS1B (ENSFALG00000011002) #18 BLTP3B (ENSFALG00000011011) #20 ACTR6 (ENSFALG00000011019) #21 DEPDC4 (ENSFALG00000011024) SCYL2 (ENSFALG00000011030) #22 SLC17A8 (ENSFALG00000011054) #23 NR1H4 (ENSFALG00000011082) #24 GAS2L3 (ENSFALG00000011087) #26 ANO4 (ENSFALG00000011097) #27 SLC5A8 (ENSFALG00000011124) #29 UTP20 (ENSFALG00000011135) #30 ARL1 (ENSFALG00000011156) #31 NUP205 (ENSFALG00000011170) CNOT4 (ENSFALG00000011194) ENSFALG00000011238 STRA8 (ENSFALG00000011279) WDR91 (ENSFALG00000011292) ENSFALG00000026856 TMEM140 (ENSFALG00000024785) PDE6H (ENSFALG00000011312) Galloanserae ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 Anatidae ANCESTRAL SPECIES 14 ENSGT00940000154818.a.a ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000014089 ENSGT00940000160916 ENSGT00390000013260.C Pink-footed goose MODERN SPECIES 22 SNRPF (ENSABRG00000011589) AMDHD1 (ENSABRG00000011591) HAL (ENSABRG00000011632) LTA4H (ENSABRG00000012435) ELK3 (ENSABRG00000012443) CDK17 (ENSABRG00000012457) CFAP54 (ENSABRG00000012499) NEDD1 (ENSABRG00000012646) #10 ENSABRG00000012704 #11 SLC25A3 (ENSABRG00000012730) #12 IKBIP (ENSABRG00000012876) #13 APAF1 (ENSABRG00000012938) #14 ANKS1B (ENSABRG00000013567) #18 BLTP3B (ENSABRG00000013819) #20 ACTR6 (ENSABRG00000013827) #21 SCYL2 (ENSABRG00000013839) #22 SLC17A8 (ENSABRG00000013851) #23 NR1H4 (ENSABRG00000013877) #24 GAS2L3 (ENSABRG00000013903) #26 ANO4 (ENSABRG00000013932) #27 SLC5A8 (ENSABRG00000014007) #29 UTP20 (ENSABRG00000014107) #30 ARL1 (ENSABRG00000014394) #31 NUP205 (ENSABRG00000014490) CNOT4 (ENSABRG00000015473) ENSABRG00000015708 STRA8 (ENSABRG00000015796) WDR91 (ENSABRG00000015805) TMEM140 (ENSABRG00000015816) AGBL3 (ENSABRG00000015825) PDE6H (ENSABRG00000015831) Duck MODERN SPECIES AMDHD1 (ENSAPLG00000003873) HAL (ENSAPLG00000003775) LTA4H (ENSAPLG00000002921) ELK3 (ENSAPLG00000002810) CDK17 (ENSAPLG00000002462) ENSAPLG00000002309 #7 ENSAPLG00000016247 ENSAPLG00000010072 #11 SLC25A3 (ENSAPLG00000020761) #12 ENSAPLG00000010351 #13 APAF1 (ENSAPLG00000010387) #14 ANKS1B (ENSAPLG00000011148) #18 ENSAPLG00000011425 #18 BLTP3B (ENSAPLG00000011479) #20 ACTR6 (ENSAPLG00000012204) #21 SCYL2 (ENSAPLG00000012666) #22 SLC17A8 (ENSAPLG00000012919) #23 NR1H4 (ENSAPLG00000013289) #24 GAS2L3 (ENSAPLG00000013956) #26 ANO4 (ENSAPLG00000014449) #27 SLC5A8 (ENSAPLG00000015303) #29 UTP20 (ENSAPLG00000015651) #30 ARL1 (ENSAPLG00000016092) #31 NUP205 (ENSAPLG00000016163) CNOT4 (ENSAPLG00000016441) ENSAPLG00000002381 STRA8 (ENSAPLG00000002652) WDR91 (ENSAPLG00000002770) TMEM140 (ENSAPLG00000022691) AGBL3 (ENSAPLG00000003396) PDE6H (ENSAPLG00000025333) Phasianidae ANCESTRAL SPECIES ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 Phasianidae_b ANCESTRAL SPECIES 9 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 Chicken MODERN SPECIES AMDHD1 (ENSGALG00010011876) HAL (ENSGALG00010011891) LTA4H (ENSGALG00010011903) ELK3 (ENSGALG00010011929) CDK17 (ENSGALG00010011953) CFAP54 (ENSGALG00010011960) NEDD1 (ENSGALG00010011979) TMPO (ENSGALG00010014294) #11 SLC25A3 (ENSGALG00010010588) #12 IKBIP (ENSGALG00010010614) #13 APAF1 (ENSGALG00010010618) #14 ENSGALG00010014314 #18 ENSGALG00010010629 #18 BLTP3B (ENSGALG00010011480) #20 ACTR6 (ENSGALG00010011496) #21 SCYL2 (ENSGALG00010011529) #22 SLC17A8 (ENSGALG00010011553) #23 NR1H4 (ENSGALG00010011566) #24 GAS2L3 (ENSGALG00010011574) #26 ANO4 (ENSGALG00010011601) #27 SLC5A8 (ENSGALG00010011616) #29 UTP20 (ENSGALG00010011663) #30 ARL1 (ENSGALG00010011692) #31 NUP205 (ENSGALG00010011702) CNOT4 (ENSGALG00010010111) ENSGALG00010010142 STRA8 (ENSGALG00010010177) WDR91 (ENSGALG00010012016) ENSGALG00010012022 TMEM140 (ENSGALG00010012028) ENSGALG00010014468 Turkey MODERN SPECIES LTA4H (ENSMGAG00000011484) ELK3 (ENSMGAG00000011496) CDK17 (ENSMGAG00000011506) ENSMGAG00000011518 #7 ENSMGAG00000019626 CFAP54 (ENSMGAG00000011526) ENSMGAG00000011537 ENSMGAG00000011543 #11 SLC25A3 (ENSMGAG00000011563) #12 IKBIP (ENSMGAG00000011570) #13 APAF1 (ENSMGAG00000011573) #14 ENSMGAG00000023009 #18 ENSMGAG00000011607 #18 BLTP3B (ENSMGAG00000011618) #20 ACTR6 (ENSMGAG00000011643) #21 SCYL2 (ENSMGAG00000011660) #22 SLC17A8 (ENSMGAG00000011674) #23 NR1H4 (ENSMGAG00000011690) #24 GAS2L3 (ENSMGAG00000011632) #26 ANO4 (ENSMGAG00000011699) #27 SLC5A8 (ENSMGAG00000011713) #29 UTP20 (ENSMGAG00000011726) #30 ARL1 (ENSMGAG00000011748) #31 NUP205 (ENSMGAG00000011752) CNOT4 (ENSMGAG00000011788) ENSMGAG00000011766 STRA8 (ENSMGAG00000011772) WDR91 (ENSMGAG00000011777) ENSMGAG00000019729 TMEM140 (ENSMGAG00000020464) AGBL3 (ENSMGAG00000011798) Japanese quail MODERN SPECIES SNRPF (ENSCJPG00005005007) AMDHD1 (ENSCJPG00005005008) HAL (ENSCJPG00005005017) LTA4H (ENSCJPG00005005020) ELK3 (ENSCJPG00005005029) CDK17 (ENSCJPG00005005036) CFAP54 (ENSCJPG00005005038) ENSCJPG00005005055 ENSCJPG00005005094 #11 SLC25A3 (ENSCJPG00005005099) #12 ENSCJPG00005005104 #13 APAF1 (ENSCJPG00005005109) #14 ANKS1B (ENSCJPG00005005999) #18 BLTP3B (ENSCJPG00005007360) #20 ACTR6 (ENSCJPG00005007379) #21 SCYL2 (ENSCJPG00005007380) #22 SLC17A8 (ENSCJPG00005007381) #23 NR1H4 (ENSCJPG00005007383) #24 GAS2L3 (ENSCJPG00005007384) #26 ANO4 (ENSCJPG00005007403) #27 SLC5A8 (ENSCJPG00005007405) #29 UTP20 (ENSCJPG00005007406) #30 ARL1 (ENSCJPG00005007421) #31 NUP205 (ENSCJPG00005007423) CNOT4 (ENSCJPG00005008206) ENSCJPG00005008371 STRA8 (ENSCJPG00005008372) WDR91 (ENSCJPG00005008373) TMEM140 (ENSCJPG00005008383) ENSCJPG00005008384 AGBL3 (ENSCJPG00005008385) African ostrich MODERN SPECIES 704 ENSSCUG00000015553 #18 BLTP3B (ENSSCUG00000015546) #20 ACTR6 (ENSSCUG00000015527) #21 DEPDC4 (ENSSCUG00000015524) SCYL2 (ENSSCUG00000015517) #22 SLC17A8 (ENSSCUG00000015490) #23 NR1H4 (ENSSCUG00000015476) #24 GAS2L3 (ENSSCUG00000015473) #26 ANO4 (ENSSCUG00000015466) #27 SLC5A8 (ENSSCUG00000015458) #29 UTP20 (ENSSCUG00000015446) #30 ARL1 (ENSSCUG00000015436) #31 NUP205 (ENSSCUG00000015418) CNOT4 (ENSSCUG00000015392) ENSSCUG00000015382 ENSSCUG00000015378 STRA8 (ENSSCUG00000015373) WDR91 (ENSSCUG00000015363) ENSSCUG00000015357 ENSSCUG00000015356 Australian saltwater crocodile MODERN SPECIES 49 ELK3 (ENSCPRG00005019116) CDK17 (ENSCPRG00005019118) ENSCPRG00005019119 #7 ENSCPRG00005019121 NEDD1 (ENSCPRG00005019125) #10 ENSCPRG00005019134 #11 SLC25A3 (ENSCPRG00005019135) #12 ENSCPRG00005019138 #13 APAF1 (ENSCPRG00005019139) #14 ENSCPRG00005019140 #18 ENSCPRG00005019141 #18 ENSCPRG00005019143 #18 BLTP3B (ENSCPRG00005019152) #20 ACTR6 (ENSCPRG00005019155) #21 DEPDC4 (ENSCPRG00005019157) SCYL2 (ENSCPRG00005000219) #22 SLC17A8 (ENSCPRG00005000387) #23 NR1H4 (ENSCPRG00005000403) #24 GAS2L3 (ENSCPRG00005000459) #26 ANO4 (ENSCPRG00005000575) #27 ENSCPRG00005000712 SLC5A8 (ENSCPRG00005000720) #29 UTP20 (ENSCPRG00005000733) #30 ARL1 (ENSCPRG00005000824) #31 NUP205 (ENSCPRG00005000915) CNOT4 (ENSCPRG00005001035) ENSCPRG00005001089 STRA8 (ENSCPRG00005001114) ENSCPRG00005001121 HTATIP2 (ENSCPRG00005001159) ENSCPRG00005001163 Cryptodira ANCESTRAL SPECIES 11 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 Emydidae ANCESTRAL SPECIES 55 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00990000205100.C ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000013192 ENSGT00390000014089 Three-toed box turtle MODERN SPECIES 28 CDK17 (ENSTMTG00000005354) ENSTMTG00000005381 NEDD1 (ENSTMTG00000005395) #10 ENSTMTG00000005408 ENSTMTG00000005437 #11 SLC25A3 (ENSTMTG00000005500) #12 IKBIP (ENSTMTG00000005522) #13 APAF1 (ENSTMTG00000005547) #14 ENSTMTG00000005600 #18 ENSTMTG00000005653 #18 ENSTMTG00000005666 ENSTMTG00000005680 #18 BLTP3B (ENSTMTG00000005732) #20 ACTR6 (ENSTMTG00000005993) #21 DEPDC4 (ENSTMTG00000006016) SCYL2 (ENSTMTG00000006038) #22 SLC17A8 (ENSTMTG00000006091) #23 NR1H4 (ENSTMTG00000006147) #24 GAS2L3 (ENSTMTG00000006165) #26 ANO4 (ENSTMTG00000006200) #27 SLC5A8 (ENSTMTG00000006295) #29 UTP20 (ENSTMTG00000006407) #30 ARL1 (ENSTMTG00000007066) #31 NUP205 (ENSTMTG00000007094) CNOT4 (ENSTMTG00000007175) ENSTMTG00000007246 ENSTMTG00000007291 STRA8 (ENSTMTG00000007654) WDR91 (ENSTMTG00000007681) ENSTMTG00000007746 TMEM140 (ENSTMTG00000007776) painted turtle MODERN SPECIES 2370 ELK3 (ENSCPBG00000002127) CDK17 (ENSCPBG00000002155) CFAP54 (ENSCPBG00000002200) NEDD1 (ENSCPBG00000002300) #10 ENSCPBG00000002444 ENSCPBG00000004178 ENSCPBG00000004210 #11 SLC25A3 (ENSCPBG00000004261) #12 IKBIP (ENSCPBG00000004281) #13 APAF1 (ENSCPBG00000004307) #14 ANKS1B (ENSCPBG00000004377) #18 ENSCPBG00000004428 BLTP3B (ENSCPBG00000004451) #20 ACTR6 (ENSCPBG00000004488) #21 DEPDC4 (ENSCPBG00000004494) SCYL2 (ENSCPBG00000004524) #22 SLC17A8 (ENSCPBG00000004579) #23 NR1H4 (ENSCPBG00000004615) #24 GAS2L3 (ENSCPBG00000004642) #26 ANO4 (ENSCPBG00000004697) #27 ENSCPBG00000004800 #29 ENSCPBG00000004811 #29 UTP20 (ENSCPBG00000004844) #30 ARL1 (ENSCPBG00000004906) #31 NUP205 (ENSCPBG00000004921) CNOT4 (ENSCPBG00000004959) ENSCPBG00000004999 STRA8 (ENSCPBG00000005357) WDR91 (ENSCPBG00000005388) CYREN (ENSCPBG00000005837) TMEM140 (ENSCPBG00000005847) Testudinidae ANCESTRAL SPECIES 12 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 Goode s thornscrub tortoise MODERN SPECIES ELK3 (ENSGEVG00005001450) CDK17 (ENSGEVG00005001417) ENSGEVG00005001381 #7 NEDD1 (ENSGEVG00005001329) #10 ENSGEVG00005001274 #11 SLC25A3 (ENSGEVG00005001235) #12 IKBIP (ENSGEVG00005001222) #13 APAF1 (ENSGEVG00005001184) #14 ENSGEVG00005001152 #18 ENSGEVG00005001121 ENSGEVG00005001112 ENSGEVG00005001096 #18 BLTP3B (ENSGEVG00005001029) #20 ACTR6 (ENSGEVG00005000969) #21 DEPDC4 (ENSGEVG00005000939) SCYL2 (ENSGEVG00005000909) #22 SLC17A8 (ENSGEVG00005000875) #23 NR1H4 (ENSGEVG00005000851) #24 GAS2L3 (ENSGEVG00005000793) #26 ENSGEVG00005000756 #27 ENSGEVG00005000697 #27 SLC5A8 (ENSGEVG00005000676) #29 UTP20 (ENSGEVG00005000522) #30 ARL1 (ENSGEVG00005000442) #31 NUP205 (ENSGEVG00005000391) CNOT4 (ENSGEVG00005000320) ENSGEVG00005000137 STRA8 (ENSGEVG00005000039) WDR91 (ENSGEVG00005002228) TMEM140 (ENSGEVG00005002212) AGBL3 (ENSGEVG00005002200) Abingdon island giant tortoise MODERN SPECIES 1349 ELK3 (ENSCABG00000004362) ENSCABG00000004364 ENSCABG00000004365 ENSCABG00000004367 #7 ENSCABG00000004376 NEDD1 (ENSCABG00000004378) #10 ENSCABG00000004397 #11 SLC25A3 (ENSCABG00000004401) #12 IKBIP (ENSCABG00000004405) #13 APAF1 (ENSCABG00000004476) #14 ENSCABG00000006478 #18 ENSCABG00000006480 ENSCABG00000006483 #18 BLTP3B (ENSCABG00000006488) #20 ACTR6 (ENSCABG00000006494) #21 SCYL2 (ENSCABG00000006497) #22 SLC17A8 (ENSCABG00000006502) #23 NR1H4 (ENSCABG00000006514) #24 GAS2L3 (ENSCABG00000006567) #26 ANO4 (ENSCABG00000006582) #27 SLC5A8 (ENSCABG00000006678) #29 UTP20 (ENSCABG00000006683) #30 ARL1 (ENSCABG00000006686) #31 NUP205 (ENSCABG00000006694) CNOT4 (ENSCABG00000007360) ENSCABG00000007363 STRA8 (ENSCABG00000007409) WDR91 (ENSCABG00000007420) ENSCABG00000007514 TMEM140 (ENSCABG00000007516) Chinese turtle MODERN SPECIES 1257 ACTR6 (ENSPSIG00000016086) #21 SCYL2 (ENSPSIG00000016228) #22 SLC17A8 (ENSPSIG00000005348) #23 NR1H4 (ENSPSIG00000005774) #24 GAS2L3 (ENSPSIG00000007108) #26 ANO4 (ENSPSIG00000007612) #27 SLC5A8 (ENSPSIG00000013997) #29 UTP20 (ENSPSIG00000016689) #30 ARL1 (ENSPSIG00000006539) #31 NUP205 (ENSPSIG00000006899) CNOT4 (ENSPSIG00000011256) ENSPSIG00000012985 STRA8 (ENSPSIG00000013824) WDR91 (ENSPSIG00000014113) TMEM140 (ENSPSIG00000015467) AGBL3 (ENSPSIG00000015627) PDE6H (ENSPSIG00000016325) Lepidosauria ANCESTRAL SPECIES 3 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164439 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 ENSGT00940000160916 tuatara DUPLICATION tuatara MODERN SPECIES 115 ACTR6 (ENSSPUG00000003969) #21 DEPDC4 (ENSSPUG00000004002) ENSSPUG00000004011 #22 ENSSPUG00000004022 #22 SLC17A8 (ENSSPUG00000004052) #23 NR1H4 (ENSSPUG00000004119) #24 GAS2L3 (ENSSPUG00000004171) #26 ANO4 (ENSSPUG00000004307) #27 SLC5A8 (ENSSPUG00000004422) #29 UTP20 (ENSSPUG00000004513) #30 ARL1 (ENSSPUG00000004578) #31 ENSSPUG00000004595 ENSSPUG00000004607 ENSSPUG00000004616 ENSSPUG00000004628 CNOT4 (ENSSPUG00000004677) ENSSPUG00000004691 ENSSPUG00000004694 tuatara MODERN SPECIES 115 ACTR6 (ENSSPUG00000003969) #21 DEPDC4 (ENSSPUG00000004002) ENSSPUG00000004011 #22 ENSSPUG00000004022 #22 SLC17A8 (ENSSPUG00000004052) #23 NR1H4 (ENSSPUG00000004119) #24 GAS2L3 (ENSSPUG00000004171) #26 ANO4 (ENSSPUG00000004307) #27 SLC5A8 (ENSSPUG00000004422) #29 UTP20 (ENSSPUG00000004513) #30 ARL1 (ENSSPUG00000004578) #31 ENSSPUG00000004595 ENSSPUG00000004607 ENSSPUG00000004616 ENSSPUG00000004628 CNOT4 (ENSSPUG00000004677) ENSSPUG00000004691 ENSSPUG00000004694 STRA8 (ENSSPUG00000004718) Episquamata ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164439 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #29 ENSGT00940000155166.A.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Laterata ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT01030000235320 ENSGT00940000162446 ENSGT00390000001561 #10 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b.b #29 ENSGT00940000155166.A.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Common wall lizard MODERN SPECIES 1 HAL (ENSPMRG00000010680) LTA4H (ENSPMRG00000010705) ELK3 (ENSPMRG00000010715) CDK17 (ENSPMRG00000010799) ENSPMRG00000011233 #7 ENSPMRG00000011242 CFAP54 (ENSPMRG00000011254) NEDD1 (ENSPMRG00000011292) #10 ENSPMRG00000011315 #11 SLC25A3 (ENSPMRG00000011324) #12 IKBIP (ENSPMRG00000011348) #13 APAF1 (ENSPMRG00000011359) #14 ANKS1B (ENSPMRG00000011403) #18 BLTP3B (ENSPMRG00000011427) #20 ACTR6 (ENSPMRG00000011434) #21 SCYL2 (ENSPMRG00000011442) #22 SLC17A8 (ENSPMRG00000011455) #23 NR1H4 (ENSPMRG00000011463) #24 GAS2L3 (ENSPMRG00000011475) #26 ANO4 (ENSPMRG00000011481) #27 ENSPMRG00000011516 #29 ENSPMRG00000011526 #29 ENSPMRG00000011534 #29 UTP20 (ENSPMRG00000011556) #30 ARL1 (ENSPMRG00000011603) #31 NUP205 (ENSPMRG00000011620) POLR3H (ENSPMRG00000011848) CNOT4 (ENSPMRG00000011854) ENSPMRG00000011858 ENSPMRG00000011861 ENSPMRG00000011865 Argentine black and white tegu MODERN SPECIES 6 AMDHD1 (ENSSMRG00000011278) HAL (ENSSMRG00000011281) LTA4H (ENSSMRG00000011347) ELK3 (ENSSMRG00000011356) CDK17 (ENSSMRG00000011361) ENSSMRG00000011419 #7 ENSSMRG00000011423 ENSSMRG00000011458 #11 ENSSMRG00000011468 #12 IKBIP (ENSSMRG00000011475) #13 APAF1 (ENSSMRG00000011507) #14 ANKS1B (ENSSMRG00000013652) #18 ENSSMRG00000013656 #18 BLTP3B (ENSSMRG00000013657) #20 ACTR6 (ENSSMRG00000013660) #21 SCYL2 (ENSSMRG00000013663) #22 SLC17A8 (ENSSMRG00000013665) #23 NR1H4 (ENSSMRG00000013669) #24 GAS2L3 (ENSSMRG00000013671) #26 ANO4 (ENSSMRG00000013676) #27 ENSSMRG00000013682 #29 ENSSMRG00000013849 #29 UTP20 (ENSSMRG00000013863) #30 ARL1 (ENSSMRG00000014003) #31 NUP205 (ENSSMRG00000014005) POLR3H (ENSSMRG00000014008) CNOT4 (ENSSMRG00000014010) ENSSMRG00000014012 STRA8 (ENSSMRG00000014027) WDR91 (ENSSMRG00000014028) ENSSMRG00000014073 Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #29 ENSGT00940000155166.A.a #29 ENSGT00940000155166.A.b.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Elapidae ANCESTRAL SPECIES 6 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129.b ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710 #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #29 ENSGT00940000155166.A.b.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068.k ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Elapidae_a ANCESTRAL SPECIES 1 ENSGT00390000008645 ENSGT00390000009047.b.kb ENSGT00390000009047.b.jb ENSGT00940000156375 ENSGT00940000157129.b ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710.c #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #29 ENSGT00940000155166.A.b.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068.k ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Acanthophiinae ANCESTRAL SPECIES ENSGT00390000008645 ENSGT00390000009047.b.kb ENSGT00390000009047.b.jb ENSGT00940000156375 ENSGT00940000157129.b ENSGT00940000155834 ENSGT00940000162970 #7 ENSGT00940000164439 ENSGT00940000154098.a #11 ENSGT00390000008708 #12 ENSGT00500000045001 #13 ENSGT00940000157710.c #14 ENSGT00940000154572 #18 ENSGT00600000084428.b #20 ENSGT00720000108833 #21 ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #29 ENSGT00940000155166.A.b.a #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068.k ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Eastern brown snake MODERN SPECIES HAL (ENSPTXG00000002604) LTA4H (ENSPTXG00000002602) ELK3 (ENSPTXG00000002600) CDK17 (ENSPTXG00000002418) ENSPTXG00000002414 #7 ENSPTXG00000002413 ENSPTXG00000002408 #11 SLC25A3 (ENSPTXG00000002405) #12 ENSPTXG00000002403 #13 APAF1 (ENSPTXG00000002205) #14 ENSPTXG00000002195 #18 ENSPTXG00000002194 #18 ENSPTXG00000002193 #18 BLTP3B (ENSPTXG00000002189) #20 ACTR6 (ENSPTXG00000002188) #21 SCYL2 (ENSPTXG00000002187) #22 SLC17A8 (ENSPTXG00000002186) #23 NR1H4 (ENSPTXG00000001317) #24 GAS2L3 (ENSPTXG00000001145) #26 ANO4 (ENSPTXG00000001124) #27 ENSPTXG00000001113 #29 ENSPTXG00000001108 #29 UTP20 (ENSPTXG00000000980) #30 ARL1 (ENSPTXG00000000946) #31 NUP205 (ENSPTXG00000000931) POLR3H (ENSPTXG00000000926) CNOT4 (ENSPTXG00000000917) ENSPTXG00000000729 STRA8 (ENSPTXG00000000710) WDR91 (ENSPTXG00000000706) TMEM140 (ENSPTXG00000000700) Mainland tiger snake MODERN SPECIES 6 LTA4H (ENSNSUG00000017050) ELK3 (ENSNSUG00000017051) CDK17 (ENSNSUG00000017052) ENSNSUG00000017053 #7 ENSNSUG00000017055 ENSNSUG00000017116 ENSNSUG00000017118 #11 SLC25A3 (ENSNSUG00000017119) #12 APAF1 (ENSNSUG00000017121) #14 ENSNSUG00000017255 #18 ENSNSUG00000017256 #18 ENSNSUG00000017257 #18 ENSNSUG00000017258 #20 ENSNSUG00000017259 #20 ACTR6 (ENSNSUG00000017261) #21 SCYL2 (ENSNSUG00000017268) #22 SLC17A8 (ENSNSUG00000000011) #23 NR1H4 (ENSNSUG00000000091) #24 GAS2L3 (ENSNSUG00000000318) #26 ANO4 (ENSNSUG00000000361) #27 ENSNSUG00000000771 #29 ENSNSUG00000000773 #29 ENSNSUG00000000777 #29 UTP20 (ENSNSUG00000000784) #30 ENSNSUG00000000796 #31 NUP205 (ENSNSUG00000000801) POLR3H (ENSNSUG00000003329) CNOT4 (ENSNSUG00000003330) ENSNSUG00000003335 STRA8 (ENSNSUG00000003336) WDR91 (ENSNSUG00000003337) Blue-lipped sea krait MODERN SPECIES 10008 SCYL2 (ENSLLTG00000013692) #22 Indian cobra MODERN SPECIES 6 ELK3 (ENSNNAG00000004018) CDK17 (ENSNNAG00000004131) ENSNNAG00000004779 #7 ENSNNAG00000004875 ENSNNAG00000004966 ENSNNAG00000004995 #11 SLC25A3 (ENSNNAG00000005036) #12 ENSNNAG00000005080 #13 IKBIP (ENSNNAG00000005091) #13 APAF1 (ENSNNAG00000005230) #14 ENSNNAG00000007376 #18 ENSNNAG00000007398 #18 ENSNNAG00000007416 #18 BLTP3B (ENSNNAG00000007447) #20 ACTR6 (ENSNNAG00000007574) #21 SCYL2 (ENSNNAG00000007673) #22 SLC17A8 (ENSNNAG00000008409) #23 NR1H4 (ENSNNAG00000008500) #24 GAS2L3 (ENSNNAG00000008691) #26 ANO4 (ENSNNAG00000008832) #27 ENSNNAG00000008998 #29 ENSNNAG00000009030 #29 ENSNNAG00000009121 #30 ARL1 (ENSNNAG00000009157) #31 NUP205 (ENSNNAG00000009561) ENSNNAG00000014769 CNOT4 (ENSNNAG00000014785) ENSNNAG00000014867 STRA8 (ENSNNAG00000014961) WDR91 (ENSNNAG00000015012) TMEM140 (ENSNNAG00000015058) Lizard MODERN SPECIES 4 CDK17 (ENSACAG00000013452) ENSACAG00000043446 ENSACAG00000013432 #7 ENSACAG00000013337 ENSACAG00000028953 ENSACAG00000037609 ENSACAG00000013272 #11 SLC25A3 (ENSACAG00000013232) #12 IKBIP (ENSACAG00000013225) #13 APAF1 (ENSACAG00000013012) #14 ENSACAG00000012892 #18 ENSACAG00000012813 #18 BLTP3B (ENSACAG00000012716) #20 ENSACAG00000042031 ACTR6 (ENSACAG00000012651) #21 SCYL2 (ENSACAG00000012521) #22 SLC17A8 (ENSACAG00000012416) #23 NR1H4 (ENSACAG00000012333) #24 GAS2L3 (ENSACAG00000043416) #26 ANO4 (ENSACAG00000012017) #27 ENSACAG00000012014 #29 ENSACAG00000011810 #29 UTP20 (ENSACAG00000011671) #30 ARL1 (ENSACAG00000011602) #31 NUP205 (ENSACAG00000011264) ENSACAG00000011213 CNOT4 (ENSACAG00000011154) ENSACAG00000042011 ENSACAG00000036483 ENSACAG00000041952 ENSACAG00000011027 Anura ANCESTRAL SPECIES ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000156168.C ENSGT00940000161256 ENSGT00940000164705 ENSGT00530000063371.C ENSGT00940000166081 ENSGT00940000158095 ENSGT00940000160001 ENSGT00940000160184 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000158187 #23 ENSGT00940000158037 #24 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.h #29 ENSGT00940000155166.A.g #29 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Frog MODERN SPECIES 3 brd8 (ENSXETG00000006726) kif20a (ENSXETG00000006721) cdc23 (ENSXETG00000006716) gfra3 (ENSXETG00000006712) cdc25c (ENSXETG00000006710) XB5920187 [provisional] (ENSXETG00000033144) ctbp2l (ENSXETG00000006705) kdm3b (ENSXETG00000006700) reep2 (ENSXETG00000013880) ENSXETG00000045657 egr1 (ENSXETG00000006697) apaf1 (ENSXETG00000006695) #14 ccdc87 (ENSXETG00000031527) tcp11l2 (ENSXETG00000006691) depdc4 (ENSXETG00000041023) scyl2 (ENSXETG00000006690) #22 slc17a8 (ENSXETG00000033364) #23 nr1h4 (ENSXETG00000030372) #24 gas2l3 (ENSXETG00000032845) #26 ano4 (ENSXETG00000031739) #27 ENSXETG00000031274 #29 slc5a8.1 (ENSXETG00000002542) #29 utp20 (ENSXETG00000032346) #30 arl1 (ENSXETG00000002540) #31 SPIC (ENSXETG00000038663) #32 mybpc1 (ENSXETG00000032982) #33 chpt1 (ENSXETG00000002538) #34 gnptab (ENSXETG00000032085) #36 dram1 (ENSXETG00000027990) #37 washc3 (ENSXETG00000039010) nup37 (ENSXETG00000002535) Leishan spiny toad MODERN SPECIES 6 GFRA3 (ENSLLEG00000010807) CDC25C (ENSLLEG00000011008) ENSLLEG00000011266 ENSLLEG00000011507 FAM53C (ENSLLEG00000011559) ENSLLEG00000011651 KDM3B (ENSLLEG00000011842) REEP2 (ENSLLEG00000012153) EGR1 (ENSLLEG00000012227) APAF1 (ENSLLEG00000012306) #14 ENSLLEG00000012873 ENSLLEG00000012983 TCP11L2 (ENSLLEG00000013008) ACTR6 (ENSLLEG00000013168) #21 DEPDC4 (ENSLLEG00000013520) SCYL2 (ENSLLEG00000013606) #22 SLC17A8 (ENSLLEG00000013824) #23 NR1H4 (ENSLLEG00000013967) #24 GAS2L3 (ENSLLEG00000014031) #26 ANO4 (ENSLLEG00000014143) #27 ENSLLEG00000014952 #29 ENSLLEG00000015204 #29 UTP20 (ENSLLEG00000015630) #30 ENSLLEG00000016106 ARL1 (ENSLLEG00000016133) #31 ENSLLEG00000016253 SPIC (ENSLLEG00000016280) #32 MYBPC1 (ENSLLEG00000016437) #33 CHPT1 (ENSLLEG00000018242) #34 ENSLLEG00000018360 #35 GNPTAB (ENSLLEG00000018464) #36 Coelacanth MODERN SPECIES 317 TTC38 (ENSLACG00000009672) CDPF1 (ENSLACG00000010445) PKDREJ (ENSLACG00000010618) PPARA (ENSLACG00000010917) ACTR6 (ENSLACG00000011582) #21 TCP11L2 (ENSLACG00000011812) ENSLACG00000012282 ENSLACG00000012417 APAF1 (ENSLACG00000012823) #14 ANKS1B (ENSLACG00000013945) #18 ENSLACG00000016205 #18 BLTP3B (ENSLACG00000016905) #20 CKAP4 (ENSLACG00000017109) IKBIP (ENSLACG00000017173) #13 DEPDC4 (ENSLACG00000017206) SCYL2 (ENSLACG00000017276) #22 si:ch211-244b2.3 (ENSLACG00000017406) SLC17A8 (ENSLACG00000017547) #23 NR1H4 (ENSLACG00000017655) #24 ENSLACG00000017806 Actinopterygii ANCESTRAL SPECIES 44 ENSGT00390000004190 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000162483 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00940000159081 ENSGT00390000004984 ENSGT00390000006088 ENSGT00390000010777 ENSGT00390000014084 ENSGT01030000234578.B.a #37 ENSGT00390000006747 #36 ENSGT00950000183117.a.a #34 ENSGT00940000158254 #33 ENSGT00940000155067.b.a ##32 ENSGT00940000155067.a #32 Reedfish MODERN SPECIES nav3 (ENSECRG00000009243) ENSECRG00000009184 mcat (ENSECRG00000009176) ttll1 (ENSECRG00000009159) pacsin2 (ENSECRG00000009143) arfgap3 (ENSECRG00000009110) IKBIP (ENSECRG00000009093) #13 ENSECRG00000009080 uhrf1bp1l (ENSECRG00000009040) #20 anks1b (ENSECRG00000006208) #18 ENSECRG00000005984 apaf1 (ENSECRG00000005928) #14 tcp11l2 (ENSECRG00000005889) actr6 (ENSECRG00000005878) #21 DEPDC4 (ENSECRG00000005867) scyl2 (ENSECRG00000005840) #22 ENSECRG00000005812 ENSECRG00000005794 ASCL1 (ENSECRG00000005766) pah (ENSECRG00000005757) th2 (ENSECRG00000005740) igf1 (ENSECRG00000005729) pmch (ENSECRG00000005723) parpbp (ENSECRG00000005713) nup37 (ENSECRG00000005703) washc3 (ENSECRG00000005692) dram1 (ENSECRG00000005683) #37 gnptab (ENSECRG00000005649) #36 chpt1 (ENSECRG00000005630) #34 mybpc1 (ENSECRG00000005173) #33 spic (ENSECRG00000005061) #32 Neopterygii ANCESTRAL SPECIES 29 ENSGT00950000183146.a.a ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00950000182885.B ENSGT00950000182885.C.b Spotted gar MODERN SPECIES 674 ENSLOCG00000015122 mcat (ENSLOCG00000015128) ttll1 (ENSLOCG00000015129) pacsin2 (ENSLOCG00000015131) arfgap3 (ENSLOCG00000015134) IKBIP (ENSLOCG00000015136) #13 ENSLOCG00000017892 #13 CKAP4 (ENSLOCG00000015137) uhrf1bp1l (ENSLOCG00000015138) #20 anks1b (ENSLOCG00000015145) #18 apaf1 (ENSLOCG00000015153) #14 ENSLOCG00000015160 tcp11l2 (ENSLOCG00000015162) actr6 (ENSLOCG00000015163) #21 DEPDC4 (ENSLOCG00000015166) scyl2 (ENSLOCG00000015168) #22 si:ch211-244b2.4 (ENSLOCG00000015170) pah (ENSLOCG00000015172) washc3 (ENSLOCG00000015173) nup37 (ENSLOCG00000015176) parpbp (ENSLOCG00000015177) pmch (ENSLOCG00000015178) igf1 (ENSLOCG00000015180) dram1 (ENSLOCG00000015183) #37 gnptab (ENSLOCG00000015184) #36 chpt1 (ENSLOCG00000015186) #34 mybpc1 (ENSLOCG00000015188) #33 ENSLOCG00000017893 ##32 spic (ENSLOCG00000015193) #32 arl1 (ENSLOCG00000015195) #31 UTP20 (ENSLOCG00000015197) #30 Osteoglossocephalai ANCESTRAL SPECIES 281 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 Clupeocephala ANCESTRAL SPECIES 321 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a Euteleosteomorpha ANCESTRAL SPECIES 60 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b ENSGT00730000111591.b Protacanthopterygii ANCESTRAL SPECIES 23 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.g.a #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b Salmoninae ANCESTRAL SPECIES 316 ENSGT00940000156720.q ENSGT00950000182973.a.c.b ENSGT00940000158466.k ENSGT00500000045001 #13 ENSGT00390000015968.d ENSGT00600000084428.b #20 ENSGT00940000154572.g.a.b #18 ENSGT00940000154572.g.a.a #18 ENSGT00940000157710 #14 ENSGT00940000157835.h ENSGT00940000155095.i.b.b.d ENSGT00390000018647 ENSGT00940000157835.g ENSGT00940000155095.i.b.b.c.a ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676.c ENSGT00940000164581.A.a.a.h ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968.e ENSGT00940000158177.b ENSGT00940000158382.o.b Salmoninae_a ANCESTRAL SPECIES 187 ENSGT00940000155095.i.b.b.c.a.a ENSGT00950000182976.a.a.d ENSGT00880000138031 #22 ENSGT01000000214676.c ENSGT00940000164581.A.a.a.h ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968.e ENSGT00940000158177.b ENSGT00940000158382.o.a ENSGT00940000167455.i ENSGT00950000182952.C.h.e Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 537 ENSGT00880000138031.q #22 ENSGT01000000214676.c.b Oncorhynchus_a ANCESTRAL SPECIES 687 ENSGT00880000138031.q #22 ENSGT01000000214676.c.b Coho salmon DUPLICATION Coho salmon MODERN SPECIES 10 ENSOKIG00005008012 ttll1 (ENSOKIG00005007938) pacsin2 (ENSOKIG00005007847) arfgap3 (ENSOKIG00005007823) ENSOKIG00005007815 #13 ENSOKIG00005007809 uhrf1bp1l (ENSOKIG00005007664) #20 ENSOKIG00005007646 ENSOKIG00005007630 #18 ENSOKIG00005007621 apaf1 (ENSOKIG00005007268) #14 ENSOKIG00005007206 TCP11L2 (ENSOKIG00005007199) FUT9 (ENSOKIG00005007194) ENSOKIG00005007178 scyl2 (ENSOKIG00005007097) #22 ENSOKIG00005007068 si:ch211-244b2.4 (ENSOKIG00005007055) si:dkeyp-38g8.5 (ENSOKIG00005007040) epyc (ENSOKIG00005007016) kera (ENSOKIG00005007007) lum (ENSOKIG00005006995) ENSOKIG00005006986 dcn (ENSOKIG00005006972) ENSOKIG00005006965 ENSOKIG00005006958 btg1 (ENSOKIG00005006949) ENSOKIG00005006943 fam3c (ENSOKIG00005006911) ENSOKIG00005006891 ENSOKIG00005006879 Coho salmon MODERN SPECIES 29 ENSOKIG00005040906 ttll1 (ENSOKIG00005040847) pacsin2 (ENSOKIG00005040667) arfgap3 (ENSOKIG00005040504) ENSOKIG00005040467 #13 ENSOKIG00005040459 uhrf1bp1l (ENSOKIG00005039481) #20 ENSOKIG00005039321 anks1b (ENSOKIG00005039178) #18 ENSOKIG00005039129 apaf1 (ENSOKIG00005038271) #14 ENSOKIG00005038162 tcp11l2 (ENSOKIG00005038105) FUT9 (ENSOKIG00005038095) ENSOKIG00005038053 SCYL2 (ENSOKIG00005037889) #22 ENSOKIG00005037833 si:dkeyp-38g8.5 (ENSOKIG00005037807) epyc (ENSOKIG00005037790) kera (ENSOKIG00005037781) lum (ENSOKIG00005037761) dcn (ENSOKIG00005037745) ENSOKIG00005037736 ENSOKIG00005037721 btg1 (ENSOKIG00005037694) ENSOKIG00005037620 ENSOKIG00005037584 impdh1b (ENSOKIG00005035400) ENSOKIG00005035208 ENSOKIG00005035184 ENSOKIG00005035157 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 91 ENSGT00940000155095.i.b.b.c.a.a ENSGT00950000182976.a.a.d ENSGT00880000138031.r.a #22 ENSGT01000000214676.d ENSGT00940000164581.A.a.a.h ENSGT00640000091774.b.j ENSGT00940000157574.u.a ENSGT00940000158382.o.b ENSGT00940000167455.j ENSGT00940000158968.e.b ENSGT00940000158177.b.h ENSGT00940000158382.o.a ENSGT00940000167455.i ENSGT00950000182952.C.h.f ENSGT00950000183004.a.b.a.a.y.b ENSGT01030000234563.a.a.c.a.c.a ENSGT00950000182952.C.h.e ENSGT00950000183004.a.b.a.a.y.a Rainbow trout MODERN SPECIES 6 ttll1 (ENSOMYG00000033697) pacsin2 (ENSOMYG00000033726) arfgap3 (ENSOMYG00000033735) ENSOMYG00000033752 #13 ENSOMYG00000033765 uhrf1bp1l (ENSOMYG00000033796) #20 ENSOMYG00000054848 #18 ENSOMYG00000056533 apaf1 (ENSOMYG00000034118) #14 ENSOMYG00000077427 ENSOMYG00000034760 ENSOMYG00000034767 ENSOMYG00000034771 ENSOMYG00000034776 ENSOMYG00000034780 ENSOMYG00000034804 #22 ENSOMYG00000077608 si:ch211-244b2.4 (ENSOMYG00000034884) si:dkeyp-38g8.5 (ENSOMYG00000034901) epyc (ENSOMYG00000034911) kera (ENSOMYG00000034932) lum (ENSOMYG00000034937) dcn (ENSOMYG00000034961) ENSOMYG00000034970 ENSOMYG00000072178 ENSOMYG00000047881 ENSOMYG00000062686 btg1 (ENSOMYG00000034979) ENSOMYG00000035003 ENSOMYG00000020508 impdh1b (ENSOMYG00000035078) Oncorhynchus_a ANCESTRAL SPECIES 198 ENSGT00940000155095.i.b.b.c.a.a ENSGT00950000182976.a.a.d ENSGT00880000138031.r.a #22 ENSGT01000000214676.d ENSGT00940000164581.A.a.a.h ENSGT00640000091774.b.j ENSGT00940000157574.u.a ENSGT00940000158968.e.b ENSGT00940000158177.b.g.b ENSGT00940000158382.o.b ENSGT00940000167455.j ENSGT00950000182952.C.h.f.a Chinook salmon MODERN SPECIES 416 tcp11l2 (ENSOTSG00005025584) FUT9 (ENSOTSG00005025585) ENSOTSG00005025586 scyl2 (ENSOTSG00005025587) #22 ENSOTSG00005025588 si:ch211-244b2.4 (ENSOTSG00005025591) ENSOTSG00005025593 si:dkeyp-38g8.5 (ENSOTSG00005025595) epyc (ENSOTSG00005025598) kera (ENSOTSG00005025600) lum (ENSOTSG00005025603) ENSOTSG00005025608 Oncorhynchus ANCESTRAL SPECIES 98 ENSGT00500000045001.e.a #13 ENSGT00390000015968.c ENSGT00600000084428.b.o #20 ENSGT00940000154572.g.a.b #18 ENSGT00500000045001.e.b.a #13 ENSGT00390000015968.d.a ENSGT00600000084428.b.p #20 ENSGT00940000154572.g.b #18 ENSGT01100000263473.a.b.g.a.a.b.a.b.a.a.b.b ENSGT00940000157710.p.b #14 ENSGT00390000018647 ENSGT00940000157835.g.a ENSGT00940000155095.i.b.b.c.a.b ENSGT00940000155095.i.b.b.d.a ENSGT00950000182976.a.a.c ENSGT00880000138031.r.b #22 ENSGT01000000214676.c.a ENSGT00640000091774.b.i ENSGT00940000157574.u.b ENSGT00940000158968.e.a ENSGT00940000158177.b.g ENSGT00940000158382.p Rainbow trout MODERN SPECIES 13 ttll1 (ENSOMYG00000007689) ENSOMYG00000068546 pacsin2 (ENSOMYG00000069903) arfgap3 (ENSOMYG00000007670) ENSOMYG00000007619 #13 ENSOMYG00000051301 uhrf1bp1l (ENSOMYG00000007448) #20 ENSOMYG00000007276 #18 ENSOMYG00000051593 ENSOMYG00000074038 ENSOMYG00000007187 apaf1 (ENSOMYG00000006669) #14 ENSOMYG00000005587 ENSOMYG00000021015 fut9 (ENSOMYG00000021009) ENSOMYG00000020932 #22 ENSOMYG00000020885 ENSOMYG00000020878 si:dkeyp-38g8.5 (ENSOMYG00000020868) epyc (ENSOMYG00000020857) kera (ENSOMYG00000020847) lum (ENSOMYG00000020839) dcn (ENSOMYG00000020811) ENSOMYG00000020799 btg1 (ENSOMYG00000020493) ENSOMYG00000054903 ENSOMYG00000075921 ENSOMYG00000020669 ENSOMYG00000020540 ENSOMYG00000075808 ENSOMYG00000020681 Oncorhynchus_a ANCESTRAL SPECIES 83 ENSGT00950000182973.a.c.b.k.b ENSGT00940000158466.k.a.b ENSGT00500000045001.f #13 ENSGT00940000158466.k.a.a.b ENSGT00500000045001.e.b.a #13 ENSGT00390000015968.d.a ENSGT00600000084428.b.p #20 ENSGT00940000154572.h #18 ENSGT01100000263473.a.b.g.a.a.b.a.b.a.a.b.a ENSGT00940000157710.p.b #14 ENSGT00390000018647 ENSGT00940000157835.g.a ENSGT00940000155095.i.b.b.c.a.b ENSGT00940000155095.i.b.b.d.a ENSGT00950000182976.a.a.c ENSGT00880000138031.r.b #22 ENSGT01000000214676.c.a ENSGT00640000091774.b.i ENSGT00940000157574.u.b ENSGT00940000158968.e.a ENSGT00940000158177.b.g.a ENSGT00940000158382.p ENSGT00940000167455.i ENSGT00950000183004.a.b.a.a.y.a ENSGT01030000234563.a.a.c.a.c.b.a ENSGT00940000154156.c.b.i ENSGT00730000111591.b.f ENSGT00530000064743.b.e.a ENSGT00990000206730.f ENSGT00940000159260.h.c.a.a ENSGT00510000047270.j Chinook salmon MODERN SPECIES 6 bik (ENSOTSG00005004279) ttll1 (ENSOTSG00005004276) arfgap3 (ENSOTSG00005004257) ENSOTSG00005004251 #13 ENSOTSG00005004250 uhrf1bp1l (ENSOTSG00005004249) #20 ENSOTSG00005004248 #18 ENSOTSG00005004243 #18 ENSOTSG00005004241 apaf1 (ENSOTSG00005002517) #14 ENSOTSG00005002495 tcp11l2 (ENSOTSG00005002492) FUT9 (ENSOTSG00005002488) ENSOTSG00005002485 ENSOTSG00005002484 scyl2 (ENSOTSG00005002483) #22 ENSOTSG00005002478 si:dkeyp-38g8.5 (ENSOTSG00005002477) epyc (ENSOTSG00005002476) kera (ENSOTSG00005002475) lum (ENSOTSG00005002473) LRRC4 (ENSOTSG00005002471) snd1 (ENSOTSG00005002469) pax4 (ENSOTSG00005002466) hgfa (ENSOTSG00005002463) ENSOTSG00005001939 sema3aa (ENSOTSG00005004236) tmtc2a (ENSOTSG00005004206) ENSOTSG00005004200 ENSOTSG00005004199 chchd3a (ENSOTSG00005004197) Salmo DUPLICATION Salmo ANCESTRAL SPECIES 25 ENSGT01030000234980.a ENSGT00940000156720.q ENSGT00950000182973.a.c.b.i ENSGT00940000158466.k.a ENSGT00500000045001.e.b #13 ENSGT00500000045001.e.a #13 ENSGT00390000015968.d.a ENSGT00600000084428.b.n #20 ENSGT00940000154572.g.a.a #18 ENSGT00940000157710.n #14 ENSGT01100000263473.a.b.g.a.a.b.a.b.a.a.b.a ENSGT00390000018647 ENSGT00940000157835.g.a ENSGT00940000155095.i.b.b.c.a.b ENSGT00950000182976.a.a.c ENSGT00880000138031.s #22 ENSGT01000000214676.d ENSGT00940000164581.A.a.a.g ENSGT00640000091774.b.g ENSGT00940000157574.w.a ENSGT00940000158968.f ENSGT00940000158177.b.f ENSGT00940000158382.o.a.a ENSGT00940000167455.i ENSGT00950000182952.C.h.e ENSGT00950000183004.a.b.a.a.x ENSGT01030000234563.a.a.c.a.c.b ENSGT01030000234563.a.a.c.a.d ENSGT00940000154156.c.b.n.b ENSGT00730000111591.b.d ENSGT00530000064743.b.e.b Atlantic salmon MODERN SPECIES 26 ENSSSAG00000109159 ttll1 (ENSSSAG00000042404) ENSSSAG00000113351 pacsin2 (ENSSSAG00000042519) arfgap3 (ENSSSAG00000042538) ENSSSAG00000084045 #13 ENSSSAG00000099810 uhrf1bp1l (ENSSSAG00000042622) #20 ENSSSAG00000082628 #18 apaf1 (ENSSSAG00000044247) #14 ENSSSAG00000084023 ENSSSAG00000054071 ENSSSAG00000002665 ENSSSAG00000098002 ENSSSAG00000114174 scyl2 (ENSSSAG00000115955) #22 ENSSSAG00000054938 si:dkeyp-38g8.5 (ENSSSAG00000083861) epyc (ENSSSAG00000054919) kera (ENSSSAG00000110385) lum (ENSSSAG00000020269) dcn (ENSSSAG00000121802) ENSSSAG00000095748 ENSSSAG00000108947 btg1 (ENSSSAG00000054085) ENSSSAG00000101565 ENSSSAG00000002619 impdh1b (ENSSSAG00000034895) ENSSSAG00000033335 ENSSSAG00000118736 ENSSSAG00000002250 River trout MODERN SPECIES 38 ttll1 (ENSSTUG00000017379) pacsin2 (ENSSTUG00000017415) arfgap3 (ENSSTUG00000017482) ENSSTUG00000017510 #13 ENSSTUG00000017513 uhrf1bp1l (ENSSTUG00000017544) #20 anks1b (ENSSTUG00000018227) #18 apaf1 (ENSSTUG00000018437) #14 ENSSTUG00000019795 ENSSTUG00000019808 tcp11l2 (ENSSTUG00000019829) FUT9 (ENSSTUG00000019845) FUT9 (ENSSTUG00000019855) FUT9 (ENSSTUG00000019862) ENSSTUG00000019868 scyl2 (ENSSTUG00000019896) #22 ENSSTUG00000020094 si:ch211-244b2.4 (ENSSTUG00000020114) si:dkeyp-38g8.5 (ENSSTUG00000020129) epyc (ENSSTUG00000020139) kera (ENSSTUG00000020154) lum (ENSSTUG00000020158) dcn (ENSSTUG00000020180) ENSSTUG00000020198 btg1 (ENSSTUG00000020204) fam3c (ENSSTUG00000020216) ENSSTUG00000020245 impdh1b (ENSSTUG00000020282) ENSSTUG00000020824 ENSSTUG00000020842 si:dkey-5i3.5 (ENSSTUG00000020855) Salmo ANCESTRAL SPECIES 92 ENSGT01030000234980.b ENSGT00940000156720.r ENSGT00950000182973.a.c.b.j ENSGT00940000158466.k.b ENSGT00500000045001.f #13 ENSGT00390000015968.d.b ENSGT00600000084428.b.m #20 ENSGT00940000154572.g.a.b #18 ENSGT01100000263473.a.b.g.a.a.b.a.b.a.a.b.b ENSGT00940000157710.m #14 ENSGT00940000157835.h ENSGT00940000157835.g.b ENSGT00940000155095.i.b.b.c.b ENSGT00940000155095.i.b.b.c.a.a ENSGT00950000182976.a.a.d ENSGT00880000138031.t #22 ENSGT01000000214676.c ENSGT00940000164581.A.a.a.h ENSGT00640000091774.b.h ENSGT00940000157574.w.b ENSGT00940000158968.e ENSGT00940000158177.b.e ENSGT00940000158382.o.b ENSGT00940000167455.j ENSGT00950000182952.C.h.f ENSGT00950000183004.a.b.a.a.w ENSGT01030000234563.a.a.c.a.c.a ENSGT00940000154156.c.b.n.a ENSGT00730000111591.b.c ENSGT00530000064743.b.e.a ENSGT00990000206730.c.a River trout MODERN SPECIES 34 ttll1 (ENSSTUG00000041701) pacsin2 (ENSSTUG00000041513) arfgap3 (ENSSTUG00000041455) ENSSTUG00000041418 #13 ENSSTUG00000041399 uhrf1bp1l (ENSSTUG00000040036) #20 ENSSTUG00000039975 anks1b (ENSSTUG00000039859) #18 ENSSTUG00000039831 ENSSTUG00000039818 apaf1 (ENSSTUG00000038551) #14 tcp11l2 (ENSSTUG00000038503) FUT9 (ENSSTUG00000038493) FUT9 (ENSSTUG00000038490) ENSSTUG00000038470 scyl2 (ENSSTUG00000038285) #22 si:ch211-244b2.3 (ENSSTUG00000038205) si:ch211-244b2.4 (ENSSTUG00000038185) si:dkeyp-38g8.5 (ENSSTUG00000038179) epyc (ENSSTUG00000038152) kera (ENSSTUG00000038142) lum (ENSSTUG00000038135) dcn (ENSSTUG00000038117) ENSSTUG00000038113 ENSSTUG00000038107 btg1 (ENSSTUG00000038102) fam3c (ENSSTUG00000038086) ENSSTUG00000037967 IMPDH1 (ENSSTUG00000037947) ENSSTUG00000037939 LRRC4 (ENSSTUG00000037929) Atlantic salmon MODERN SPECIES 8 arfgap3 (ENSSSAG00000014750) ENSSSAG00000015054 #13 ENSSSAG00000093283 #13 ENSSSAG00000094007 ENSSSAG00000089363 uhrf1bp1l (ENSSSAG00000015227) #20 ENSSSAG00000043747 #18 ENSSSAG00000120610 apaf1 (ENSSSAG00000015477) #14 ENSSSAG00000018912 ENSSSAG00000019094 ENSSSAG00000120410 ENSSSAG00000019400 ENSSSAG00000109817 ENSSSAG00000019477 ENSSSAG00000055007 #22 ENSSSAG00000054949 ENSSSAG00000020083 si:dkeyp-38g8.5 (ENSSSAG00000100850) epyc (ENSSSAG00000020178) ENSSSAG00000115936 kera (ENSSSAG00000106037) lum (ENSSSAG00000020979) pgs2 (ENSSSAG00000020386) ENSSSAG00000117866 BTG1 (ENSSSAG00000115043) ENSSSAG00000107588 ENSSSAG00000084632 imdh1 (ENSSSAG00000103871) ENSSSAG00000084661 ENSSSAG00000101057 Huchen DUPLICATION Huchen MODERN SPECIES 2619 ENSHHUG00000015748 ENSHHUG00000015744 ENSHHUG00000015740 FUT9 (ENSHHUG00000015731) ENSHHUG00000015716 scyl2 (ENSHHUG00000015667) #22 ENSHHUG00000015658 si:ch211-244b2.4 (ENSHHUG00000015642) si:dkeyp-38g8.5 (ENSHHUG00000015633) epyc (ENSHHUG00000015623) kera (ENSHHUG00000015611) lum (ENSHHUG00000015599) ENSHHUG00000015590 Huchen MODERN SPECIES 1512 ENSHHUG00000044920 tcp11l2 (ENSHHUG00000044923) FUT9 (ENSHHUG00000044925) tcp11l2 (ENSHHUG00000044927) FUT9 (ENSHHUG00000044930) ENSHHUG00000044933 scyl2 (ENSHHUG00000044936) #22 ENSHHUG00000044943 si:ch211-244b2.4 (ENSHHUG00000044947) si:dkeyp-38g8.5 (ENSHHUG00000044961) EPYC (ENSHHUG00000044965) kera (ENSHHUG00000044993) lum (ENSHHUG00000044995) dcn (ENSHHUG00000044997) ENSHHUG00000045015 Northern pike MODERN SPECIES 22 selenoo2 (ENSELUG00000001528) ENSELUG00000001929 ENSELUG00000029303 ENSELUG00000000053 mcat (ENSELUG00000001924) ttll1 (ENSELUG00000001910) pacsin2 (ENSELUG00000001905) ENSELUG00000001887 #13 ENSELUG00000001885 uhrf1bp1l (ENSELUG00000001881) #20 anks1b (ENSELUG00000001877) #18 apaf1 (ENSELUG00000001867) #14 ENSELUG00000001863 tcp11l2 (ENSELUG00000001862) ENSELUG00000001860 scyl2 (ENSELUG00000001857) #22 si:ch211-244b2.3 (ENSELUG00000001856) si:ch211-244b2.4 (ENSELUG00000001852) si:dkeyp-38g8.5 (ENSELUG00000029910) epyc (ENSELUG00000001849) kera (ENSELUG00000001846) lum (ENSELUG00000001843) dcn (ENSELUG00000001835) ENSELUG00000000049 btg1 (ENSELUG00000032189) fam3c (ENSELUG00000001830) ENSELUG00000001825 impdh1b (ENSELUG00000001819) ENSELUG00000001810 si:dkey-5i3.5 (ENSELUG00000001809) ENSELUG00000029671 Acanthomorphata ANCESTRAL SPECIES 67 ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000171480 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT00390000014507.b ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a Cod MODERN SPECIES 17 ENSGMOG00000016858 ENSGMOG00000013697 ENSGMOG00000013701 adipor2 (ENSGMOG00000005942) ENSGMOG00000028904 ENSGMOG00000034504 ENSGMOG00000025133 ENSGMOG00000008424 ENSGMOG00000029341 ENSGMOG00000032992 ENSGMOG00000013627 ENSGMOG00000013640 ENSGMOG00000035891 ENSGMOG00000030704 ENSGMOG00000025690 ENSGMOG00000005735 #22 Euacanthomorphacea ANCESTRAL SPECIES 18 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00950000183116.a.a ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT00390000014507.b ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b Pinecone sodierfish MODERN SPECIES 15 pacsin2 (ENSMMDG00005014911) arfgap3 (ENSMMDG00005014940) ENSMMDG00005014948 #13 ENSMMDG00005014949 uhrf1bp1l (ENSMMDG00005014951) #20 ENSMMDG00005014954 anks1b (ENSMMDG00005014962) #18 apaf1 (ENSMMDG00005015800) #14 tcp11l2 (ENSMMDG00005015882) FUT9 (ENSMMDG00005015886) FUT9 (ENSMMDG00005015891) FUT9 (ENSMMDG00005015892) FUT9 (ENSMMDG00005015893) FUT9 (ENSMMDG00005015894) ENSMMDG00005015900 scyl2 (ENSMMDG00005015906) #22 ENSMMDG00005015921 si:ch211-244b2.4 (ENSMMDG00005015930) si:dkeyp-38g8.5 (ENSMMDG00005015935) epyc (ENSMMDG00005015938) kera (ENSMMDG00005015945) dcn (ENSMMDG00005015950) btg1 (ENSMMDG00005015955) fam3c (ENSMMDG00005015958) ENSMMDG00005015962 impdh1b (ENSMMDG00005015996) ENSMMDG00005017220 si:dkey-5i3.5 (ENSMMDG00005017221) ENSMMDG00005017222 ENSMMDG00005017225 snd1 (ENSMMDG00005017281) Percomorphaceae ANCESTRAL SPECIES 19 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00950000183116.a.a ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT00390000014507.b ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b Tiger tail seahorse MODERN SPECIES 321 mdfic (ENSHCOG00000005894) foxp2 (ENSHCOG00000006439) ENSHCOG00000006475 ENSHCOG00000006488 gpr85 (ENSHCOG00000006497) tmem168a (ENSHCOG00000006520) ifrd1 (ENSHCOG00000006531) dock4b (ENSHCOG00000006815) LRRN3 (ENSHCOG00000006852) LRRN3 (ENSHCOG00000006866) ENSHCOG00000006887 ENSHCOG00000000200 scyl2 (ENSHCOG00000006943) #22 tcp11l2 (ENSHCOG00000006956) apaf1 (ENSHCOG00000006976) #14 ENSHCOG00000006993 ENSHCOG00000007020 ENSHCOG00000007098 ENSHCOG00000007115 mcat (ENSHCOG00000007125) ttll1 (ENSHCOG00000007167) pacsin2 (ENSHCOG00000007229) ENSHCOG00000007277 arfgap3 (ENSHCOG00000007301) ENSHCOG00000007312 ENSHCOG00000007324 ENSHCOG00000007344 #13 uhrf1bp1l (ENSHCOG00000007367) #20 Percomorphaceae_B ANCESTRAL SPECIES 21 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00950000183116.a.a ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 Ovalentaria ANCESTRAL SPECIES 22 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b Ovalentaria_B ANCESTRAL SPECIES 23 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b Pomacentridae ANCESTRAL SPECIES 53 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b Pomacentridae_A ANCESTRAL SPECIES 23 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b Amphiprion ANCESTRAL SPECIES 53 ENSGT00390000014084 ENSGT00950000183169.B ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Clown anemonefish MODERN SPECIES 1693 ENSAOCG00000009912 #18 apaf1 (ENSAOCG00000009836) #14 tcp11l2 (ENSAOCG00000000601) ENSAOCG00000009736 scyl2 (ENSAOCG00000009694) #22 ENSAOCG00000009597 si:ch211-244b2.4 (ENSAOCG00000009571) si:dkeyp-38g8.5 (ENSAOCG00000009552) epyc (ENSAOCG00000009498) kera (ENSAOCG00000009471) lum (ENSAOCG00000009459) dcn (ENSAOCG00000009447) ENSAOCG00000000572 btg1 (ENSAOCG00000009401) fam3c (ENSAOCG00000009388) impdh1b (ENSAOCG00000009335) ENSAOCG00000009287 ENSAOCG00000009264 si:dkey-5i3.5 (ENSAOCG00000009253) ENSAOCG00000009240 Orange clownfish MODERN SPECIES 13 ENSAPEG00000008628 ENSAPEG00000008602 ENSAPEG00000008581 ENSAPEG00000008564 mcat (ENSAPEG00000008552) ttll1 (ENSAPEG00000008515) pacsin2 (ENSAPEG00000008437) arfgap3 (ENSAPEG00000008406) IKBIP (ENSAPEG00000008369) #13 ENSAPEG00000008352 uhrf1bp1l (ENSAPEG00000008081) #20 anks1b (ENSAPEG00000007920) #18 apaf1 (ENSAPEG00000007835) #14 tcp11l2 (ENSAPEG00000007824) ENSAPEG00000007791 scyl2 (ENSAPEG00000007681) #22 ENSAPEG00000007632 si:ch211-244b2.4 (ENSAPEG00000007620) si:dkeyp-38g8.5 (ENSAPEG00000007561) epyc (ENSAPEG00000007508) kera (ENSAPEG00000007496) lum (ENSAPEG00000007485) dcn (ENSAPEG00000007455) ENSAPEG00000007430 btg1 (ENSAPEG00000007416) fam3c (ENSAPEG00000007370) ENSAPEG00000007354 impdh1b (ENSAPEG00000007301) ENSAPEG00000007277 si:dkey-5i3.5 (ENSAPEG00000007262) ENSAPEG00000007244 Spiny chromis MODERN SPECIES 78 ENSAPOG00000018558 ENSAPOG00000018537 #18 ENSAPOG00000018515 #18 apaf1 (ENSAPOG00000018493) #14 tcp11l2 (ENSAPOG00000018129) ENSAPOG00000018117 scyl2 (ENSAPOG00000018066) #22 ENSAPOG00000018036 si:ch211-244b2.4 (ENSAPOG00000018028) si:dkeyp-38g8.5 (ENSAPOG00000018023) epyc (ENSAPOG00000018016) kera (ENSAPOG00000017975) lum (ENSAPOG00000017948) dcn (ENSAPOG00000017942) ENSAPOG00000017908 btg1 (ENSAPOG00000017895) fam3c (ENSAPOG00000017879) ENSAPOG00000017820 impdh1b (ENSAPOG00000017764) ENSAPOG00000017668 si:dkey-5i3.5 (ENSAPOG00000017658) ENSAPOG00000017648 Bicolor damselfish MODERN SPECIES 372 apaf1 (ENSSPAG00000012262) #14 tcp11l2 (ENSSPAG00000012228) ENSSPAG00000012194 scyl2 (ENSSPAG00000012110) #22 ENSSPAG00000012067 si:ch211-244b2.4 (ENSSPAG00000012034) si:dkeyp-38g8.5 (ENSSPAG00000012016) epyc (ENSSPAG00000011995) kera (ENSSPAG00000011988) lum (ENSSPAG00000011980) dcn (ENSSPAG00000011955) ENSSPAG00000011945 btg1 (ENSSPAG00000011935) fam3c (ENSSPAG00000011924) ENSSPAG00000011910 impdh1b (ENSSPAG00000011815) ENSSPAG00000011795 si:dkey-5i3.5 (ENSSPAG00000011791) ENSSPAG00000011784 Cichlidae ANCESTRAL SPECIES 24 ENSGT00390000014084 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Pseudocrenilabrinae ANCESTRAL SPECIES 21 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715.e ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000182271 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715.e ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000182271 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Haplochromini ANCESTRAL SPECIES 9 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715.f.b ENSGT00390000013715.e ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000182271 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Burton s mouthbrooder MODERN SPECIES 385 apaf1 (ENSHBUG00000019631) #14 tcp11l2 (ENSHBUG00000019597) ENSHBUG00000019508 scyl2 (ENSHBUG00000019473) #22 si:ch211-244b2.3 (ENSHBUG00000019453) si:ch211-244b2.4 (ENSHBUG00000019440) si:dkeyp-38g8.5 (ENSHBUG00000000579) epyc (ENSHBUG00000000865) kera (ENSHBUG00000019407) lum (ENSHBUG00000019397) dcn (ENSHBUG00000019392) ENSHBUG00000019386 btg1 (ENSHBUG00000019375) fam3c (ENSHBUG00000019362) ENSHBUG00000019350 impdh1b (ENSHBUG00000019305) ENSHBUG00000019158 si:dkey-5i3.5 (ENSHBUG00000019150) ENSHBUG00000019142 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715.f.b ENSGT00390000013715.e ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000182271 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Haplochromini_B ANCESTRAL SPECIES 11 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715.f.b ENSGT00390000013715.e ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Eastern happy MODERN SPECIES 8 MCAT (ENSACLG00000021397) ENSACLG00000021648 MCAT (ENSACLG00000021707) ttll1 (ENSACLG00000021714) pacsin2 (ENSACLG00000021744) arfgap3 (ENSACLG00000021829) ENSACLG00000021855 #13 ENSACLG00000021874 #13 ENSACLG00000021941 uhrf1bp1l (ENSACLG00000021952) #20 anks1b (ENSACLG00000022062) #18 ENSACLG00000022153 apaf1 (ENSACLG00000022176) #14 tcp11l2 (ENSACLG00000022214) ENSACLG00000022256 scyl2 (ENSACLG00000022310) #22 si:ch211-244b2.3 (ENSACLG00000022380) si:ch211-244b2.4 (ENSACLG00000022403) si:dkeyp-38g8.5 (ENSACLG00000022438) epyc (ENSACLG00000022420) kera (ENSACLG00000022464) lum (ENSACLG00000022489) dcn (ENSACLG00000022503) ENSACLG00000022513 btg1 (ENSACLG00000022519) fam3c (ENSACLG00000022525) ENSACLG00000022622 ENSACLG00000022656 impdh1b (ENSACLG00000022668) ENSACLG00000022758 si:dkey-5i3.5 (ENSACLG00000022784) Zebra mbuna MODERN SPECIES 1099 ENSMZEG00005003759 ENSMZEG00005003794 ENSMZEG00005003873 MCAT (ENSMZEG00005003898) MCAT (ENSMZEG00005004882) ttll1 (ENSMZEG00005004921) pacsin2 (ENSMZEG00005004949) arfgap3 (ENSMZEG00005004994) ENSMZEG00005005057 #13 ENSMZEG00005005068 uhrf1bp1l (ENSMZEG00005005085) #20 anks1b (ENSMZEG00005005137) #18 apaf1 (ENSMZEG00005005271) #14 tcp11l2 (ENSMZEG00005005314) ENSMZEG00005005331 scyl2 (ENSMZEG00005005348) #22 si:ch211-244b2.3 (ENSMZEG00005005381) si:ch211-244b2.4 (ENSMZEG00005005397) si:dkeyp-38g8.5 (ENSMZEG00005005404) epyc (ENSMZEG00005005416) kera (ENSMZEG00005005437) lum (ENSMZEG00005005454) dcn (ENSMZEG00005005461) ENSMZEG00005005478 btg1 (ENSMZEG00005005485) fam3c (ENSMZEG00005005500) ENSMZEG00005005521 impdh1b (ENSMZEG00005005561) ENSMZEG00005005637 si:dkey-5i3.5 (ENSMZEG00005005643) ENSMZEG00005005652 P. nyererei MODERN SPECIES 347 ttll1 (ENSPNYG00000002044) pacsin2 (ENSPNYG00000002019) arfgap3 (ENSPNYG00000001947) ENSPNYG00000001926 #13 ENSPNYG00000001910 uhrf1bp1l (ENSPNYG00000001856) #20 ENSPNYG00000001813 anks1b (ENSPNYG00000001726) #18 ENSPNYG00000001696 apaf1 (ENSPNYG00000001602) #14 tcp11l2 (ENSPNYG00000001534) ENSPNYG00000001482 scyl2 (ENSPNYG00000001469) #22 ENSPNYG00000001439 si:ch211-244b2.4 (ENSPNYG00000001424) epyc (ENSPNYG00000001335) kera (ENSPNYG00000001289) lum (ENSPNYG00000001280) dcn (ENSPNYG00000001271) ENSPNYG00000001247 btg1 (ENSPNYG00000001236) fam3c (ENSPNYG00000001211) ENSPNYG00000001182 impdh1b (ENSPNYG00000001120) ENSPNYG00000001080 si:dkey-5i3.5 (ENSPNYG00000001056) ENSPNYG00000001038 LRRC4 (ENSPNYG00000001024) Lyretail cichlid MODERN SPECIES 291 washc3 (ENSNBRG00000008811) ENSNBRG00000008771 ENSNBRG00000008721 ENSNBRG00000008695 mcat (ENSNBRG00000008678) ttll1 (ENSNBRG00000008651) pacsin2 (ENSNBRG00000008592) ENSNBRG00000008564 IKBIP (ENSNBRG00000008541) #13 uhrf1bp1l (ENSNBRG00000008275) #20 anks1b (ENSNBRG00000008153) #18 ENSNBRG00000008092 apaf1 (ENSNBRG00000007523) #14 tcp11l2 (ENSNBRG00000007474) ENSNBRG00000007440 scyl2 (ENSNBRG00000007169) #22 ENSNBRG00000007125 si:ch211-244b2.4 (ENSNBRG00000007103) si:dkeyp-38g8.5 (ENSNBRG00000007068) epyc (ENSNBRG00000007038) kera (ENSNBRG00000007031) lum (ENSNBRG00000007027) dcn (ENSNBRG00000007021) ENSNBRG00000006982 btg1 (ENSNBRG00000006972) fam3c (ENSNBRG00000006867) ENSNBRG00000006818 impdh1b (ENSNBRG00000006793) ENSNBRG00000006765 si:dkey-5i3.5 (ENSNBRG00000006761) ENSNBRG00000006741 Nile tilapia MODERN SPECIES 8 ENSONIG00000000057 ENSONIG00000031740 ENSONIG00000000058 MCAT (ENSONIG00000011389) ttll1 (ENSONIG00000011392) pacsin2 (ENSONIG00000011394) arfgap3 (ENSONIG00000011404) ENSONIG00000011413 #13 ENSONIG00000011415 uhrf1bp1l (ENSONIG00000011416) #20 anks1b (ENSONIG00000011422) #18 ENSONIG00000039975 apaf1 (ENSONIG00000011426) #14 tcp11l2 (ENSONIG00000011431) ENSONIG00000011437 scyl2 (ENSONIG00000011440) #22 si:ch211-244b2.3 (ENSONIG00000030041) si:ch211-244b2.4 (ENSONIG00000011444) si:dkeyp-38g8.5 (ENSONIG00000011448) epyc (ENSONIG00000011449) kera (ENSONIG00000011450) lum (ENSONIG00000037870) dcn (ENSONIG00000034299) ENSONIG00000011456 btg1 (ENSONIG00000042934) fam3c (ENSONIG00000011462) ENSONIG00000011468 impdh1b (ENSONIG00000011474) ENSONIG00000031172 si:dkey-5i3.5 (ENSONIG00000011479) ENSONIG00000037271 Midas cichlid MODERN SPECIES 30 ENSACIG00000002068 ENSACIG00000002246 mcat (ENSACIG00000002257) ttll1 (ENSACIG00000002277) pacsin2 (ENSACIG00000002313) ENSACIG00000002333 ARFGAP3 (ENSACIG00000002359) ENSACIG00000002383 #13 ENSACIG00000002402 uhrf1bp1l (ENSACIG00000002419) #20 anks1b (ENSACIG00000002599) #18 apaf1 (ENSACIG00000002681) #14 ENSACIG00000003006 tcp11l2 (ENSACIG00000003022) DEPDC4 (ENSACIG00000003093) scyl2 (ENSACIG00000003116) #22 ENSACIG00000003171 si:dkeyp-38g8.5 (ENSACIG00000003215) epyc (ENSACIG00000003231) kera (ENSACIG00000003343) lum (ENSACIG00000003369) dcn (ENSACIG00000003406) ENSACIG00000003426 btg1 (ENSACIG00000003434) fam3c (ENSACIG00000003446) ENSACIG00000003468 impdh1b (ENSACIG00000003493) si:dkey-5i3.5 (ENSACIG00000003531) ENSACIG00000003535 snd1 (ENSACIG00000003551) LRRC4 (ENSACIG00000003594) Atherinomorphae ANCESTRAL SPECIES 21 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b Oryzias ANCESTRAL SPECIES 20 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676.f ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b Oryzias_a ANCESTRAL SPECIES 15 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676.f ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 51 washc3 (ENSOSIG00000000058) ENSOSIG00000021536 ENSOSIG00000021530 ENSOSIG00000021526 MCAT (ENSOSIG00000021525) ttll1 (ENSOSIG00000021524) pacsin2 (ENSOSIG00000021517) arfgap3 (ENSOSIG00000021515) ENSOSIG00000021513 IKBIP (ENSOSIG00000021511) #13 uhrf1bp1l (ENSOSIG00000021508) #20 anks1b (ENSOSIG00000021498) #18 apaf1 (ENSOSIG00000021425) #14 tcp11l2 (ENSOSIG00000021375) ENSOSIG00000021372 scyl2 (ENSOSIG00000021363) #22 ENSOSIG00000021361 si:ch211-244b2.4 (ENSOSIG00000021357) si:dkeyp-38g8.5 (ENSOSIG00000021356) epyc (ENSOSIG00000021354) kera (ENSOSIG00000021352) lum (ENSOSIG00000021350) dcn (ENSOSIG00000021349) ENSOSIG00000021347 btg1 (ENSOSIG00000021344) fam3c (ENSOSIG00000021340) impdh1b (ENSOSIG00000021287) ENSOSIG00000021281 si:dkey-5i3.5 (ENSOSIG00000021280) ENSOSIG00000021278 ENSOSIG00000021277 Chinese medaka MODERN SPECIES 52 ENSOSIG00000020763 ENSOSIG00000020762 ENSOSIG00000020759 MCAT (ENSOSIG00000020758) ENSOSIG00000020757 ttll1 (ENSOSIG00000020755) pacsin2 (ENSOSIG00000020745) arfgap3 (ENSOSIG00000020737) IKBIP (ENSOSIG00000020726) #13 ENSOSIG00000020714 uhrf1bp1l (ENSOSIG00000020583) #20 anks1b (ENSOSIG00000020564) #18 apaf1 (ENSOSIG00000019941) #14 tcp11l2 (ENSOSIG00000019881) ENSOSIG00000019878 scyl2 (ENSOSIG00000019870) #22 ENSOSIG00000019859 si:ch211-244b2.4 (ENSOSIG00000019857) si:dkeyp-38g8.5 (ENSOSIG00000019852) epyc (ENSOSIG00000019850) kera (ENSOSIG00000019848) lum (ENSOSIG00000019847) dcn (ENSOSIG00000019846) ENSOSIG00000019839 btg1 (ENSOSIG00000019835) fam3c (ENSOSIG00000019832) ENSOSIG00000019825 impdh1b (ENSOSIG00000019664) ENSOSIG00000019625 LRRC4 (ENSOSIG00000019624) snd1 (ENSOSIG00000018785) Japanese Medaka HdrR MODERN SPECIES 15 ENSORLG00000024339 mcat (ENSORLG00000015629) ENSORLG00000025654 ttll1 (ENSORLG00000015623) pacsin2 (ENSORLG00000015594) arfgap3 (ENSORLG00000027675) IKBIP (ENSORLG00000015552) #13 ENSORLG00000015544 uhrf1bp1l (ENSORLG00000015538) #20 anks1b (ENSORLG00000015497) #18 ENSORLG00000025240 ENSORLG00000022959 apaf1 (ENSORLG00000015449) #14 tcp11l2 (ENSORLG00000015425) ENSORLG00000015415 scyl2 (ENSORLG00000015396) #22 ENSORLG00000015352 si:ch211-244b2.4 (ENSORLG00000015345) si:dkeyp-38g8.5 (ENSORLG00000015334) epyc (ENSORLG00000029785) kera (ENSORLG00000015326) lum (ENSORLG00000015318) dcn (ENSORLG00000015308) ENSORLG00000026036 ENSORLG00000029439 btg1 (ENSORLG00000029614) fam3c (ENSORLG00000015255) ENSORLG00000015230 impdh1b (ENSORLG00000015224) ENSORLG00000024290 lep-b (ENSORLG00000021942) Oryzias_b ANCESTRAL SPECIES 19 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676.e ENSGT01000000214676.f ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b Javanese ricefish MODERN SPECIES 15 washc3 (ENSOJAG00000022199) ENSOJAG00000022211 ENSOJAG00000022217 ENSOJAG00000022285 mcat (ENSOJAG00000022292) ENSOJAG00000022309 ttll1 (ENSOJAG00000022321) pacsin2 (ENSOJAG00000022339) arfgap3 (ENSOJAG00000022364) IKBIP (ENSOJAG00000022377) #13 ENSOJAG00000022382 anks1b (ENSOJAG00000022495) #18 apaf1 (ENSOJAG00000022532) #14 tcp11l2 (ENSOJAG00000022552) ENSOJAG00000022579 scyl2 (ENSOJAG00000022587) #22 ENSOJAG00000009030 ENSOJAG00000009045 si:ch211-244b2.4 (ENSOJAG00000009092) epyc (ENSOJAG00000009122) kera (ENSOJAG00000009135) lum (ENSOJAG00000009146) dcn (ENSOJAG00000009156) ENSOJAG00000009190 btg1 (ENSOJAG00000009216) fam3c (ENSOJAG00000009244) ENSOJAG00000009356 impdh1b (ENSOJAG00000009409) ENSOJAG00000009587 ENSOJAG00000009591 ENSOJAG00000009606 Indian medaka MODERN SPECIES 2 ENSOMEG00000005361 ENSOMEG00000005420 ENSOMEG00000005452 mcat (ENSOMEG00000005466) ENSOMEG00000005476 ttll1 (ENSOMEG00000005534) pacsin2 (ENSOMEG00000005606) arfgap3 (ENSOMEG00000005631) ENSOMEG00000005651 #13 ENSOMEG00000005666 uhrf1bp1l (ENSOMEG00000005823) #20 anks1b (ENSOMEG00000005882) #18 apaf1 (ENSOMEG00000000126) #14 tcp11l2 (ENSOMEG00000005951) DEPDC4 (ENSOMEG00000005967) scyl2 (ENSOMEG00000006012) #22 ENSOMEG00000006032 ENSOMEG00000006048 si:ch211-244b2.4 (ENSOMEG00000006058) si:dkeyp-38g8.5 (ENSOMEG00000000137) epyc (ENSOMEG00000006079) kera (ENSOMEG00000006086) lum (ENSOMEG00000006096) dcn (ENSOMEG00000006148) ENSOMEG00000006163 btg1 (ENSOMEG00000006173) fam3c (ENSOMEG00000006203) ENSOMEG00000006249 impdh1b (ENSOMEG00000006271) ENSOMEG00000006284 ENSOMEG00000006295 Cyprinodontiformes ANCESTRAL SPECIES 19 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b Aplocheiloidei ANCESTRAL SPECIES 14 ENSGT00390000014084 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Mangrove rivulus MODERN SPECIES 19 dram1 (ENSKMAG00000010245) #37 washc3 (ENSKMAG00000010212) ENSKMAG00000010200 ENSKMAG00000010178 ENSKMAG00000010139 ttll1 (ENSKMAG00000010091) pacsin2 (ENSKMAG00000010039) arfgap3 (ENSKMAG00000009990) ENSKMAG00000009977 #13 ENSKMAG00000009968 uhrf1bp1l (ENSKMAG00000009835) #20 anks1b (ENSKMAG00000009595) #18 apaf1 (ENSKMAG00000009512) #14 tcp11l2 (ENSKMAG00000009492) ENSKMAG00000009476 scyl2 (ENSKMAG00000009396) #22 si:ch211-244b2.3 (ENSKMAG00000009347) si:ch211-244b2.4 (ENSKMAG00000009331) si:dkeyp-38g8.5 (ENSKMAG00000009306) epyc (ENSKMAG00000009247) kera (ENSKMAG00000009228) lum (ENSKMAG00000009216) dcn (ENSKMAG00000009180) ENSKMAG00000008974 btg1 (ENSKMAG00000008916) fam3c (ENSKMAG00000008875) ENSKMAG00000008842 impdh1b (ENSKMAG00000008802) ENSKMAG00000008787 si:dkey-5i3.5 (ENSKMAG00000008778) ENSKMAG00000008762 Turquoise killifish MODERN SPECIES 1610 OLA.20856 (ENSNFUG00015005361) MCAT (ENSNFUG00015005355) TTLL1 (ENSNFUG00015005326) PACSIN2 (ENSNFUG00015005272) ENSNFUG00015005252 arfgap3 (ENSNFUG00015004659) IKBIP (ENSNFUG00015004611) #13 ENSNFUG00015004606 #13 ENSNFUG00015004603 uhrf1bp1l (ENSNFUG00015004470) #20 ENSNFUG00015004435 anks1b (ENSNFUG00015004405) #18 ENSNFUG00015004386 #14 tcp11l2 (ENSNFUG00015004375) DEPDC4 (ENSNFUG00015004366) scyl2 (ENSNFUG00015004308) #22 ENSNFUG00015004284 si:ch211-244b2.4 (ENSNFUG00015004277) ENSNFUG00015004268 epyc (ENSNFUG00015004258) kera (ENSNFUG00015004256) lum (ENSNFUG00015004253) DCN (ENSNFUG00015004249) ENSNFUG00015004237 BTG1 (ENSNFUG00015004230) ENSNFUG00015004227 ENSNFUG00015004223 FAM3C (ENSNFUG00015004219) ENSNFUG00015004209 impdh1b (ENSNFUG00015004128) PRRT4 (ENSNFUG00015004112) Cyprinodontoidei ANCESTRAL SPECIES 20 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b Poeciliinae ANCESTRAL SPECIES 19 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Poecilia ANCESTRAL SPECIES 29 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 NAME_6 ANCESTRAL SPECIES 144 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b.c Sailfin molly MODERN SPECIES 1315 apaf1 (ENSPLAG00000010200) #14 tcp11l2 (ENSPLAG00000010177) ENSPLAG00000010167 scyl2 (ENSPLAG00000010135) #22 ENSPLAG00000010049 si:ch211-244b2.4 (ENSPLAG00000010029) si:dkeyp-38g8.5 (ENSPLAG00000010021) EPYC (ENSPLAG00000009973) kera (ENSPLAG00000009703) lum (ENSPLAG00000009690) dcn (ENSPLAG00000009645) ENSPLAG00000009608 Amazon molly MODERN SPECIES 404 ENSPFOG00000006004 ENSPFOG00000023895 PARP11 (ENSPFOG00000006032) ENSPFOG00000006118 ENSPFOG00000024229 ENSPFOG00000006446 ENSPFOG00000024680 tnni1d (ENSPFOG00000006708) st8sia1 (ENSPFOG00000006771) anks1b (ENSPFOG00000006852) #18 ENSPFOG00000024317 ENSPFOG00000021939 apaf1 (ENSPFOG00000007334) #14 tcp11l2 (ENSPFOG00000007657) ENSPFOG00000007804 scyl2 (ENSPFOG00000007922) #22 ENSPFOG00000008191 si:ch211-244b2.4 (ENSPFOG00000008262) si:dkeyp-38g8.5 (ENSPFOG00000008311) epyc (ENSPFOG00000008328) kera (ENSPFOG00000008371) dcn (ENSPFOG00000008407) ENSPFOG00000008612 btg1 (ENSPFOG00000008625) fam3c (ENSPFOG00000008654) ENSPFOG00000008791 impdh1b (ENSPFOG00000008979) ENSPFOG00000023055 si:dkey-5i3.5 (ENSPFOG00000009129) ENSPFOG00000009135 Guppy MODERN SPECIES 454 ENSPREG00000022945 ENSPREG00000022959 ENSPREG00000022976 mcat (ENSPREG00000022982) ttll1 (ENSPREG00000022989) pacsin2 (ENSPREG00000022997) arfgap3 (ENSPREG00000023004) ENSPREG00000023017 #13 ENSPREG00000023023 #13 ENSPREG00000023024 uhrf1bp1l (ENSPREG00000023028) #20 anks1b (ENSPREG00000023036) #18 apaf1 (ENSPREG00000000752) #14 ENSPREG00000001131 ENSPREG00000001150 scyl2 (ENSPREG00000001218) #22 ENSPREG00000001533 si:ch211-244b2.4 (ENSPREG00000001561) si:dkeyp-38g8.5 (ENSPREG00000001593) EPYC (ENSPREG00000001638) kera (ENSPREG00000001702) lum (ENSPREG00000001725) dcn (ENSPREG00000001779) ENSPREG00000001801 btg1 (ENSPREG00000001817) fam3c (ENSPREG00000001835) ENSPREG00000001866 impdh1b (ENSPREG00000002032) ENSPREG00000002102 si:dkey-5i3.5 (ENSPREG00000002110) ENSPREG00000002133 Platyfish MODERN SPECIES 8 ENSXMAG00000001447 ENSXMAG00000029748 ENSXMAG00000001421 mcat (ENSXMAG00000021275) ttll1 (ENSXMAG00000027638) pacsin2 (ENSXMAG00000001367) arfgap3 (ENSXMAG00000001324) ENSXMAG00000001321 #13 ENSXMAG00000001319 uhrf1bp1l (ENSXMAG00000001296) #20 ENSXMAG00000025411 anks1b (ENSXMAG00000001252) #18 apaf1 (ENSXMAG00000018504) #14 tcp11l2 (ENSXMAG00000018543) ENSXMAG00000018558 scyl2 (ENSXMAG00000018567) #22 si:ch211-244b2.3 (ENSXMAG00000018581) si:ch211-244b2.4 (ENSXMAG00000018584) si:dkeyp-38g8.5 (ENSXMAG00000026377) epyc (ENSXMAG00000018588) kera (ENSXMAG00000018602) lum (ENSXMAG00000018604) dcn (ENSXMAG00000027036) ENSXMAG00000028648 btg1 (ENSXMAG00000018622) fam3c (ENSXMAG00000018624) ENSXMAG00000018632 impdh1b (ENSXMAG00000018652) ENSXMAG00000028675 si:dkey-5i3.5 (ENSXMAG00000026885) ENSXMAG00000025240 NAME_4 ANCESTRAL SPECIES 16 ENSGT00390000014084 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968.j ENSGT00940000158177.b ENSGT00940000158382.n ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b Sheepshead minnow MODERN SPECIES 1259 ENSCVAG00000012143 #18 apaf1 (ENSCVAG00000012121) #14 tcp11l2 (ENSCVAG00000012098) ENSCVAG00000012088 scyl2 (ENSCVAG00000012052) #22 si:ch211-244b2.3 (ENSCVAG00000012014) si:ch211-244b2.4 (ENSCVAG00000012000) si:dkeyp-38g8.5 (ENSCVAG00000011991) epyc (ENSCVAG00000011978) ENSCVAG00000011972 kera (ENSCVAG00000011963) lum (ENSCVAG00000011955) dcn (ENSCVAG00000011947) Mummichog DUPLICATION Mummichog MODERN SPECIES 2228 ATG2A (ENSFHEG00000002339) nxf1a (ENSFHEG00000002375) ENSFHEG00000002394 ENSFHEG00000002405 rnaseh2c (ENSFHEG00000002419) ZBTB3 (ENSFHEG00000002425) trpt1 (ENSFHEG00000002434) fermt3b (ENSFHEG00000002453) FLRT1 (ENSFHEG00000002471) macrod1 (ENSFHEG00000002495) ccdc88b (ENSFHEG00000002518) rom1b (ENSFHEG00000002541) ENSFHEG00000002567 #22 ENSFHEG00000002570 INTS5 (ENSFHEG00000002574) GANAB (ENSFHEG00000002636) ENSFHEG00000002656 ubxn1 (ENSFHEG00000002678) ehd1a (ENSFHEG00000002690) ENSFHEG00000002701 ENSFHEG00000002702 ttc9c (ENSFHEG00000002710) dpf2l (ENSFHEG00000002746) ENSFHEG00000002755 zdhhc24 (ENSFHEG00000002764) pola2 (ENSFHEG00000002775) ENSFHEG00000002782 ENSFHEG00000002793 Mummichog MODERN SPECIES 2268 washc3 (ENSFHEG00000005762) ENSFHEG00000000591 ENSFHEG00000005675 ENSFHEG00000005325 mcat (ENSFHEG00000005308) ttll1 (ENSFHEG00000005277) pacsin2 (ENSFHEG00000005223) arfgap3 (ENSFHEG00000005194) ENSFHEG00000005173 #13 ENSFHEG00000005152 uhrf1bp1l (ENSFHEG00000005121) #20 anks1b (ENSFHEG00000005075) #18 apaf1 (ENSFHEG00000004836) #14 tcp11l2 (ENSFHEG00000004788) ENSFHEG00000004783 scyl2 (ENSFHEG00000004766) #22 si:ch211-244b2.3 (ENSFHEG00000004656) si:ch211-244b2.4 (ENSFHEG00000004642) si:dkeyp-38g8.5 (ENSFHEG00000004625) epyc (ENSFHEG00000004613) kera (ENSFHEG00000004459) lum (ENSFHEG00000004449) dcn (ENSFHEG00000004440) ENSFHEG00000004400 btg1 (ENSFHEG00000004367) fam3c (ENSFHEG00000004353) ENSFHEG00000004291 ENSFHEG00000004191 impdh1b (ENSFHEG00000004178) ENSFHEG00000004116 si:dkey-5i3.5 (ENSFHEG00000004110) Percomorphaceae_C ANCESTRAL SPECIES 22 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000177480.a ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 Eupercaria ANCESTRAL SPECIES 21 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b Tetraodontidae ANCESTRAL SPECIES 17 ENSGT00940000168691 ENSGT01100000263519.E.b.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00990000205707 ENSGT00730000111591.b ENSGT00530000064743.b ENSGT00940000159260.h Fugu MODERN SPECIES 9 ENSTRUG00000026359 ENSTRUG00000022066 ENSTRUG00000012399 ENSTRUG00000012423 ttll1 (ENSTRUG00000012595) pacsin2 (ENSTRUG00000012654) ENSTRUG00000013651 arfgap3 (ENSTRUG00000012812) ENSTRUG00000023311 #13 ENSTRUG00000012913 uhrf1bp1l (ENSTRUG00000012937) #20 anks1b (ENSTRUG00000013069) #18 apaf1 (ENSTRUG00000013192) #14 tcp11l2 (ENSTRUG00000013371) ENSTRUG00000013501 scyl2 (ENSTRUG00000013597) #22 ENSTRUG00000022466 epyc (ENSTRUG00000013658) kera (ENSTRUG00000013697) lum (ENSTRUG00000025547) dcn (ENSTRUG00000013771) ENSTRUG00000013884 btg1 (ENSTRUG00000032692) fam3c (ENSTRUG00000013911) impdh1b (ENSTRUG00000014021) ENSTRUG00000026379 ENSTRUG00000024191 si:dkey-5i3.5 (ENSTRUG00000024951) snd1 (ENSTRUG00000014067) LRRC4 (ENSTRUG00000014390) ENSTRUG00000020292 Eupecaria_A ANCESTRAL SPECIES 21 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Eupecaria_B ANCESTRAL SPECIES 21 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Eupecaria_C ANCESTRAL SPECIES 18 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Eupercaria_incertae_sedis ANCESTRAL SPECIES 22 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000164581.A.a.a ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 ENSGT00940000159260.h European seabass MODERN SPECIES 23 dram1 (ENSDLAG00005015685) #37 gnptab (ENSDLAG00005015505) #36 ENSDLAG00005015488 ENSDLAG00005025988 ENSDLAG00005025984 ENSDLAG00005025980 ttll1 (ENSDLAG00005025979) pacsin2 (ENSDLAG00005025974) arfgap3 (ENSDLAG00005025957) ENSDLAG00005025949 #13 ENSDLAG00005025948 uhrf1bp1l (ENSDLAG00005025914) #20 ENSDLAG00005025898 #18 apaf1 (ENSDLAG00005025867) #14 ENSDLAG00005025862 scyl2 (ENSDLAG00005032025) #22 ENSDLAG00005025844 si:ch211-244b2.4 (ENSDLAG00005025840) epyc (ENSDLAG00005025831) kera (ENSDLAG00005025828) lum (ENSDLAG00005025826) dcn (ENSDLAG00005025824) ENSDLAG00005025823 ENSDLAG00005025821 btg1 (ENSDLAG00005029234) ENSDLAG00005025810 ENSDLAG00005025730 ENSDLAG00005025712 ENSDLAG00005025711 ENSDLAG00005025710 ENSDLAG00005031035 Large yellow croaker MODERN SPECIES 491 ENSLCRG00005010721 mcat (ENSLCRG00005010719) ENSLCRG00005010718 ttll1 (ENSLCRG00005010717) pacsin2 (ENSLCRG00005010714) arfgap3 (ENSLCRG00005010696) ENSLCRG00005007713 #13 ENSLCRG00005007712 ENSLCRG00005007711 uhrf1bp1l (ENSLCRG00005006536) #20 anks1b (ENSLCRG00005006505) #18 apaf1 (ENSLCRG00005006390) #14 tcp11l2 (ENSLCRG00005006367) ENSLCRG00005006364 ENSLCRG00005006355 scyl2 (ENSLCRG00005006328) #22 si:ch211-244b2.3 (ENSLCRG00005006324) si:ch211-244b2.4 (ENSLCRG00005006321) epyc (ENSLCRG00005006316) kera (ENSLCRG00005006315) lum (ENSLCRG00005006313) dcn (ENSLCRG00005006311) ENSLCRG00005006307 btg1 (ENSLCRG00005006306) fam3c (ENSLCRG00005006303) ENSLCRG00005006296 impdh1b (ENSLCRG00005006179) ENSLCRG00005006169 si:dkey-5i3.5 (ENSLCRG00005006168) ENSLCRG00005006167 Gilthead seabream MODERN SPECIES 5 ENSSAUG00010012586 ENSSAUG00010012583 uhrf1bp1l (ENSSAUG00010012328) #20 anks1b (ENSSAUG00010012290) #18 apaf1 (ENSSAUG00010012185) #14 tcp11l2 (ENSSAUG00010012162) FUT9 (ENSSAUG00010012158) FUT9 (ENSSAUG00010012157) FUT9 (ENSSAUG00010012154) FUT9 (ENSSAUG00010012153) FUT9 (ENSSAUG00010012151) FUT9 (ENSSAUG00010012150) ENSSAUG00010012149 FUT9 (ENSSAUG00010012147) ENSSAUG00010012145 scyl2 (ENSSAUG00010012122) #22 ENSSAUG00010012115 si:ch211-244b2.4 (ENSSAUG00010012111) si:dkeyp-38g8.5 (ENSSAUG00010012108) epyc (ENSSAUG00010012106) kera (ENSSAUG00010012104) lum (ENSSAUG00010012103) dcn (ENSSAUG00010012101) ENSSAUG00010012099 btg1 (ENSSAUG00010012097) fam3c (ENSSAUG00010012092) ENSSAUG00010012091 impdh1b (ENSSAUG00010011966) ENSSAUG00010011954 si:dkey-5i3.5 (ENSSAUG00010011949) ENSSAUG00010027598 Perciformes ANCESTRAL SPECIES 18 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Perciformes_a ANCESTRAL SPECIES 19 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT00940000159260.h Pike perch MODERN SPECIES 28 ENSSLUG00000014615 mcat (ENSSLUG00000014611) ENSSLUG00000014605 ttll1 (ENSSLUG00000014599) pacsin2 (ENSSLUG00000014526) arfgap3 (ENSSLUG00000014442) ENSSLUG00000014426 #13 ENSSLUG00000014420 ENSSLUG00000014415 uhrf1bp1l (ENSSLUG00000014381) #20 anks1b (ENSSLUG00000014070) #18 apaf1 (ENSSLUG00000013724) #14 tcp11l2 (ENSSLUG00000013639) FUT9 (ENSSLUG00000013575) DEPDC4 (ENSSLUG00000013571) scyl2 (ENSSLUG00000013558) #22 ENSSLUG00000013547 si:ch211-244b2.4 (ENSSLUG00000013543) si:dkeyp-38g8.5 (ENSSLUG00000013540) epyc (ENSSLUG00000013536) kera (ENSSLUG00000013525) lum (ENSSLUG00000013524) dcn (ENSSLUG00000013521) ENSSLUG00000013470 btg1 (ENSSLUG00000013451) fam3c (ENSSLUG00000013431) ENSSLUG00000013391 impdh1b (ENSSLUG00000011693) PRRT4 (ENSSLUG00000011597) si:dkey-5i3.5 (ENSSLUG00000011591) LRRC4 (ENSSLUG00000011583) Channel bull blenny MODERN SPECIES 15 ENSCGOG00000019585 ENSCGOG00000019583 mcat (ENSCGOG00000019581) ttll1 (ENSCGOG00000019575) pacsin2 (ENSCGOG00000019377) arfgap3 (ENSCGOG00000019165) IKBIP (ENSCGOG00000019151) #13 ENSCGOG00000019154 uhrf1bp1l (ENSCGOG00000018932) #20 ENSCGOG00000018925 anks1b (ENSCGOG00000018750) #18 apaf1 (ENSCGOG00000017773) #14 tcp11l2 (ENSCGOG00000017725) ft2 (ENSCGOG00000017724) ENSCGOG00000017722 scyl2 (ENSCGOG00000017387) #22 si:ch211-244b2.3 (ENSCGOG00000017376) dram1 (ENSCGOG00000017374) #37 gnptab (ENSCGOG00000017075) #36 chpt1 (ENSCGOG00000016948) #34 mybpc1 (ENSCGOG00000016919) #33 ENSCGOG00000016917 ##32 spic (ENSCGOG00000016911) #32 ENSCGOG00000016908 atp6v1e1b (ENSCGOG00000016619) GALNT8 (ENSCGOG00000016599) rad51ap1 (ENSCGOG00000016595) fgf6b (ENSCGOG00000016593) fgf23 (ENSCGOG00000016589) tigarb (ENSCGOG00000016586) ccnd2b (ENSCGOG00000016583) Cottioidei ANCESTRAL SPECIES 19 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000171480 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b Stickleback MODERN SPECIES 3 ENSGACG00000019851 ENSGACG00000019849 uhrf1bp1l (ENSGACG00000019845) #20 anks1b (ENSGACG00000019843) #18 apaf1 (ENSGACG00000019839) #14 tcp11l2 (ENSGACG00000019838) ENSGACG00000019837 FUT9 (ENSGACG00000019836) FUT9 (ENSGACG00000019835) FUT9 (ENSGACG00000019833) ENSGACG00000019832 FUT9 (ENSGACG00000019831) FUT9 (ENSGACG00000019830) FUT9 (ENSGACG00000019829) ENSGACG00000019827 scyl2 (ENSGACG00000019825) #22 ENSGACG00000019823 si:ch211-244b2.4 (ENSGACG00000019820) epyc (ENSGACG00000019817) kera (ENSGACG00000019816) lum (ENSGACG00000019814) dcn (ENSGACG00000019806) btg1 (ENSGACG00000019805) fam3c (ENSGACG00000019804) ENSGACG00000019801 ENSGACG00000019800 impdh1b (ENSGACG00000019797) si:dkey-5i3.5 (ENSGACG00000019796) LRRC4 (ENSGACG00000019795) snd1 (ENSGACG00000019793) ENSGACG00000019792 Ballan wrasse MODERN SPECIES 507 ENSLBEG00000015954 ENSLBEG00000015973 #18 apaf1 (ENSLBEG00000016178) #14 tcp11l2 (ENSLBEG00000016676) DEPDC4 (ENSLBEG00000016706) scyl2 (ENSLBEG00000016788) #22 ENSLBEG00000016919 si:ch211-244b2.4 (ENSLBEG00000016973) si:dkeyp-38g8.5 (ENSLBEG00000017011) epyc (ENSLBEG00000017111) kera (ENSLBEG00000017284) lum (ENSLBEG00000017294) dcn (ENSLBEG00000017319) ENSLBEG00000017337 Percomorphaceae_D ANCESTRAL SPECIES 22 ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b Carangaria ANCESTRAL SPECIES 22 ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00950000183116.a.a ENSGT00940000154572.h #18 ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00390000015805.a ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b Carangaria_A ANCESTRAL SPECIES 21 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00950000183116.a.a ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Seriola ANCESTRAL SPECIES 9 ENSGT00940000153582.a.m.b ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Greater amberjack MODERN SPECIES 60 ENSSDUG00000000963 mcat (ENSSDUG00000000979) ttll1 (ENSSDUG00000000990) pacsin2 (ENSSDUG00000001035) arfgap3 (ENSSDUG00000001101) ENSSDUG00000001128 #13 ENSSDUG00000001133 uhrf1bp1l (ENSSDUG00000001171) #20 ENSSDUG00000001449 anks1b (ENSSDUG00000001484) #18 apaf1 (ENSSDUG00000001603) #14 tcp11l2 (ENSSDUG00000001701) FUT9 (ENSSDUG00000001739) FUT9 (ENSSDUG00000001785) ENSSDUG00000001819 scyl2 (ENSSDUG00000001846) #22 si:ch211-244b2.3 (ENSSDUG00000001944) si:ch211-244b2.4 (ENSSDUG00000001958) si:dkeyp-38g8.5 (ENSSDUG00000001977) epyc (ENSSDUG00000002000) kera (ENSSDUG00000002021) lum (ENSSDUG00000002031) ENSSDUG00000002068 dcn (ENSSDUG00000002362) btg1 (ENSSDUG00000002395) fam3c (ENSSDUG00000002419) ENSSDUG00000002506 impdh1b (ENSSDUG00000002584) ENSSDUG00000002636 si:dkey-5i3.5 (ENSSDUG00000002645) ENSSDUG00000002653 Yellowtail amberjack MODERN SPECIES 2783 ENSSLDG00000021345 mcat (ENSSLDG00000021309) ttll1 (ENSSLDG00000021285) pacsin2 (ENSSLDG00000021199) arfgap3 (ENSSLDG00000021108) ENSSLDG00000021056 #13 ENSSLDG00000021069 ENSSLDG00000021041 uhrf1bp1l (ENSSLDG00000020881) #20 anks1b (ENSSLDG00000020801) #18 apaf1 (ENSSLDG00000020771) #14 tcp11l2 (ENSSLDG00000020756) FUT9 (ENSSLDG00000020741) FUT9 (ENSSLDG00000020719) DEPDC4 (ENSSLDG00000020699) scyl2 (ENSSLDG00000020602) #22 ENSSLDG00000020544 si:ch211-244b2.4 (ENSSLDG00000020508) si:dkeyp-38g8.5 (ENSSLDG00000020484) epyc (ENSSLDG00000020475) kera (ENSSLDG00000020461) lum (ENSSLDG00000020452) dcn (ENSSLDG00000020428) ENSSLDG00000020414 btg1 (ENSSLDG00000020401) fam3c (ENSSLDG00000020374) ENSSLDG00000020323 impdh1b (ENSSLDG00000020252) ENSSLDG00000020241 si:dkey-5i3.5 (ENSSLDG00000020234) ENSSLDG00000020226 Barramundi perch MODERN SPECIES 320 apaf1 (ENSLCAG00010015728) #14 tcp11l2 (ENSLCAG00010015670) ft1 (ENSLCAG00010015665) ENSLCAG00010015660 scyl2 (ENSLCAG00010015638) #22 ENSLCAG00010015627 si:ch211-244b2.4 (ENSLCAG00010015621) epyc (ENSLCAG00010015616) kera (ENSLCAG00010015612) lum (ENSLCAG00010015609) dcn (ENSLCAG00010015605) ENSLCAG00010015602 btg1 (ENSLCAG00010015599) fam3c (ENSLCAG00010015595) ENSLCAG00010015592 ENSLCAG00010015589 impdh1b (ENSLCAG00010015454) ENSLCAG00010015427 Pleuronectoidei ANCESTRAL SPECIES 16 ENSGT00950000183017.b.b.a.a ENSGT01030000234980 ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000154572.g.b #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00940000155095.i.b.b.m ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.B ENSGT00940000164581.A.a.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b ENSGT00730000111591.b Tongue sole MODERN SPECIES 18 ENSCSEG00000006289 si:dkey-5i3.5 (ENSCSEG00000006293) ENSCSEG00000006297 impdh1b (ENSCSEG00000006303) ENSCSEG00000006326 fam3c (ENSCSEG00000006349) btg1 (ENSCSEG00000006365) ENSCSEG00000006371 dcn (ENSCSEG00000006390) lum (ENSCSEG00000006414) kera (ENSCSEG00000006422) ENSCSEG00000006424 epyc (ENSCSEG00000006428) si:dkeyp-38g8.5 (ENSCSEG00000006433) ENSCSEG00000006438 scyl2 (ENSCSEG00000006450) #22 FUT9 (ENSCSEG00000006483) FUT9 (ENSCSEG00000006487) FUT9 (ENSCSEG00000006489) tcp11l2 (ENSCSEG00000006496) apaf1 (ENSCSEG00000006505) #14 ENSCSEG00000006543 #18 ENSCSEG00000006545 #18 ENSCSEG00000006550 #18 uhrf1bp1l (ENSCSEG00000006558) #20 ENSCSEG00000006597 ENSCSEG00000006608 #13 arfgap3 (ENSCSEG00000006615) pacsin2 (ENSCSEG00000006637) ttll1 (ENSCSEG00000006650) mcat (ENSCSEG00000006666) Turbot MODERN SPECIES 11 ENSSMAG00000029296 ENSSMAG00000003390 ENSSMAG00000003377 MCAT (ENSSMAG00000036603) ttll1 (ENSSMAG00000003309) pacsin2 (ENSSMAG00000003262) arfgap3 (ENSSMAG00000003248) ENSSMAG00000028028 #13 ENSSMAG00000003197 uhrf1bp1l (ENSSMAG00000003107) #20 ENSSMAG00000002919 #18 apaf1 (ENSSMAG00000002753) #14 ENSSMAG00000002712 ENSSMAG00000002702 ENSSMAG00000002674 scyl2 (ENSSMAG00000002554) #22 si:ch211-244b2.3 (ENSSMAG00000002442) si:ch211-244b2.4 (ENSSMAG00000002425) si:dkeyp-38g8.5 (ENSSMAG00000002384) epyc (ENSSMAG00000002361) kera (ENSSMAG00000002343) lum (ENSSMAG00000002317) dcn (ENSSMAG00000002300) ENSSMAG00000002295 btg1 (ENSSMAG00000034290) ENSSMAG00000002244 ENSSMAG00000002216 ENSSMAG00000002204 ENSSMAG00000025577 ENSSMAG00000002059 ENSSMAG00000024437 Anabantaria ANCESTRAL SPECIES 21 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Zig-zag eel MODERN SPECIES 15 ENSMAMG00000012729 ENSMAMG00000012716 MCAT (ENSMAMG00000026461) ttll1 (ENSMAMG00000012675) pacsin2 (ENSMAMG00000012636) arfgap3 (ENSMAMG00000012603) IKBIP (ENSMAMG00000024576) #13 ENSMAMG00000012559 ENSMAMG00000012548 uhrf1bp1l (ENSMAMG00000012506) #20 ENSMAMG00000012493 ENSMAMG00000012379 #18 apaf1 (ENSMAMG00000012291) #14 ENSMAMG00000012270 ENSMAMG00000012235 ENSMAMG00000012148 #22 ENSMAMG00000026388 si:ch211-244b2.4 (ENSMAMG00000012121) epyc (ENSMAMG00000012105) kera (ENSMAMG00000012100) lum (ENSMAMG00000012085) dcn (ENSMAMG00000012078) ENSMAMG00000012054 btg1 (ENSMAMG00000012039) ENSMAMG00000012008 ENSMAMG00000011982 ENSMAMG00000011828 ENSMAMG00000011818 ENSMAMG00000011806 ENSMAMG00000011786 ENSMAMG00000011765 Anabantoidei ANCESTRAL SPECIES 21 ENSGT00940000165434 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT01030000234980 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00390000015968 ENSGT00950000183116.a.a ENSGT00600000084428.b #20 ENSGT00940000154572.h #18 ENSGT00940000157710 #14 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00950000182952.C.h ENSGT00950000183004.a.b.a.a ENSGT01030000234563.a.a.c.a ENSGT00990000205707 ENSGT00940000154156.c.b ENSGT00730000111591.b ENSGT00530000064743.b ENSGT01030000234865 Climbing perch MODERN SPECIES 14 ENSATEG00000025840 ENSATEG00000019398 MCAT (ENSATEG00000028638) ttll1 (ENSATEG00000019361) pacsin2 (ENSATEG00000019299) arfgap3 (ENSATEG00000019276) ENSATEG00000019265 #13 ENSATEG00000019232 ENSATEG00000019201 uhrf1bp1l (ENSATEG00000019174) #20 ENSATEG00000019162 ENSATEG00000019046 #18 apaf1 (ENSATEG00000019013) #14 ENSATEG00000018990 ENSATEG00000018962 scyl2 (ENSATEG00000018903) #22 si:ch211-244b2.3 (ENSATEG00000018871) si:ch211-244b2.4 (ENSATEG00000018837) epyc (ENSATEG00000018806) kera (ENSATEG00000018788) lum (ENSATEG00000018779) dcn (ENSATEG00000018748) ENSATEG00000018736 btg1 (ENSATEG00000027464) ENSATEG00000018715 ENSATEG00000018692 ENSATEG00000018624 ENSATEG00000018613 ENSATEG00000029683 ENSATEG00000018588 ENSATEG00000018557 Siamese fighting fish MODERN SPECIES 20 ENSBSLG00000013628 ENSBSLG00000013103 mcat (ENSBSLG00000012794) ENSBSLG00000012792 ttll1 (ENSBSLG00000012787) pacsin2 (ENSBSLG00000012781) arfgap3 (ENSBSLG00000012708) IKBIP (ENSBSLG00000012703) #13 ENSBSLG00000012701 ENSBSLG00000012696 uhrf1bp1l (ENSBSLG00000012485) #20 anks1b (ENSBSLG00000011808) #18 apaf1 (ENSBSLG00000011042) #14 tcp11l2 (ENSBSLG00000010985) ENSBSLG00000010973 scyl2 (ENSBSLG00000010899) #22 ENSBSLG00000010862 si:ch211-244b2.4 (ENSBSLG00000010787) epyc (ENSBSLG00000010748) kera (ENSBSLG00000010731) lum (ENSBSLG00000010713) dcn (ENSBSLG00000010636) ENSBSLG00000010590 btg1 (ENSBSLG00000010351) fam3c (ENSBSLG00000010343) ENSBSLG00000010315 ENSBSLG00000010306 impdh1b (ENSBSLG00000009792) PRRT4 (ENSBSLG00000009687) si:dkey-5i3.5 (ENSBSLG00000009589) LRRC4 (ENSBSLG00000009577) Otomorpha ANCESTRAL SPECIES 269 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00940000171480 ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT01030000234535.D ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00940000156144.a.b ENSGT00530000063745.b ENSGT00390000006546 ENSGT00440000033504.B.b ENSGT00940000155867.a.b.e Otophysi ANCESTRAL SPECIES 40 ENSGT00940000158123 ENSGT00940000157638 ENSGT00950000182835.d.b ENSGT00790000123099 ENSGT00390000000121 ENSGT01010000222336.b.a.b.a ENSGT00940000156003.l.b ENSGT00940000157275.b ENSGT00390000005848 ENSGT00940000158165 ENSGT00940000156334.a.b ENSGT00390000003290 ENSGT00940000167341 ENSGT00940000160526 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT01030000234535.D ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894 ENSGT00510000048671 ENSGT01080000257336.b.e.b.b ENSGT01080000257336.b.e.a.a ENSGT01080000257336.b.e.a.b Cyprinoidei ANCESTRAL SPECIES 67 ENSGT00940000158123 ENSGT00940000157638 ENSGT00950000182835.d.b ENSGT00790000123099 ENSGT00390000000121 ENSGT01010000222336.b.a.b.a ENSGT00940000156003.l.b ENSGT00940000157275.b ENSGT00390000005848 ENSGT00940000158165 ENSGT00940000156334.a.b ENSGT00390000003290 ENSGT00940000155016.db.b ENSGT00940000160526 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT01030000234535.D ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894 ENSGT00510000048671 ENSGT01080000257336.b.e.b.b ENSGT01080000257336.b.e.a.a ENSGT01080000257336.b.e.a.b Zebrafish DUPLICATION Zebrafish MODERN SPECIES 5 mgarpa (ENSDARG00000071353) elf2a (ENSDARG00000019459) NOCT (ENSDARG00000077726) C1QTNF2 (ENSDARG00000059944) slu7 (ENSDARG00000038870) fermt3b (ENSDARG00000030938) FLRT1 (ENSDARG00000075597) macrod1 (ENSDARG00000029609) ccdc88b (ENSDARG00000076189) ENSDARG00000101564 rom1b (ENSDARG00000026926) ENSDARG00000100956 ENSDARG00000105412 si:ch211-276i12.9 (ENSDARG00000079150) zgc:194285 (ENSDARG00000078423) ENSDARG00000079854 #22 rarres3l (ENSDARG00000076563) rarres3 (ENSDARG00000093006) INTS5 (ENSDARG00000077943) GANAB (ENSDARG00000076811) ENSDARG00000087994 ubxn1 (ENSDARG00000090309) ehd1a (ENSDARG00000098853) ENSDARG00000075727 ENSDARG00000088195 ttc9c (ENSDARG00000007025) zgc:153018 (ENSDARG00000060977) sfxn5b (ENSDARG00000026137) ENSDARG00000101188 BEND4 (ENSDARG00000113607) shisa3 (ENSDARG00000075467) Zebrafish MODERN SPECIES 19 il15ra (ENSDARG00000069311) acot14 (ENSDARG00000089159) acot15 (ENSDARG00000045522) ENSDARG00000069292 acot17 (ENSDARG00000088524) acot18 (ENSDARG00000033413) lamb1b (ENSDARG00000045524) tmcc3 (ENSDARG00000045525) ndufa12 (ENSDARG00000042469) nr2c1 (ENSDARG00000045527) fgd6 (ENSDARG00000045528) vezt (ENSDARG00000075215) metap2a (ENSDARG00000069261) usp44 (ENSDARG00000089861) DEPDC4 (ENSDARG00000089908) scyl2 (ENSDARG00000032627) #22 si:ch211-244b2.3 (ENSDARG00000069244) si:ch211-244b2.4 (ENSDARG00000045530) st8sia1 (ENSDARG00000098221) tnni1d (ENSDARG00000073766) ENSDARG00000078749 ENSDARG00000116145 ENSDARG00000099850 ENSDARG00000041205 ENSDARG00000114833 creld2 (ENSDARG00000029071) alg12 (ENSDARG00000041199) zbed4 (ENSDARG00000024306) BRD1 (ENSDARG00000013596) tafa5a (ENSDARG00000069160) tbc1d22a (ENSDARG00000045510) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1601 ENSGT00880000138031.bb.a #22 ENSGT00940000162660.b.b.a.h.a.b Cyprininae_a ANCESTRAL SPECIES ENSGT00880000138031.bb.a #22 Golden-line barbel MODERN SPECIES 305 zgc:113425 (ENSSGRG00000020825) rab33ba (ENSSGRG00000020826) mlsl (ENSSGRG00000020828) naa15a (ENSSGRG00000020840) ndufc1 (ENSSGRG00000022187) ENSSGRG00000022188 elf2a (ENSSGRG00000022189) NOCT (ENSSGRG00000022190) C1QTNF2 (ENSSGRG00000022191) slu7 (ENSSGRG00000022192) fermt3b (ENSSGRG00000022232) macrod1 (ENSSGRG00000022318) FLRT1 (ENSSGRG00000022355) ccdc88b (ENSSGRG00000022357) rom1b (ENSSGRG00000022361) ENSSGRG00000022372 #22 rarres3l (ENSSGRG00000022633) ENSSGRG00000022661 rarres3l (ENSSGRG00000022662) rarres3l (ENSSGRG00000022663) INTS5 (ENSSGRG00000022664) GANAB (ENSSGRG00000022688) ENSSGRG00000023996 ubxn1 (ENSSGRG00000023998) ehd1a (ENSSGRG00000024000) ENSSGRG00000024031 ENSSGRG00000024041 ttc9c (ENSSGRG00000024042) zgc:153018 (ENSSGRG00000024043) sfxn5b (ENSSGRG00000024046) ENSSGRG00000024048 Goldfish MODERN SPECIES 1028 zgc:113425 (ENSCARG00000044474) rab33ba (ENSCARG00000044459) mlsl (ENSCARG00000044370) naa15a (ENSCARG00000040351) ndufc1 (ENSCARG00000040140) ENSCARG00000040122 elf2a (ENSCARG00000040104) NOCT (ENSCARG00000040095) C1QTNF2 (ENSCARG00000040054) slu7 (ENSCARG00000039817) fermt3b (ENSCARG00000039468) FLRT1 (ENSCARG00000039444) ENSCARG00000041970 ccdc88b (ENSCARG00000041900) rom1b (ENSCARG00000041868) ENSCARG00000041615 #22 rarres3l (ENSCARG00000041508) rarres3l (ENSCARG00000041488) GANAB (ENSCARG00000038120) ubxn1 (ENSCARG00000038056) ehd1a (ENSCARG00000038043) ENSCARG00000038033 ENSCARG00000038013 ttc9c (ENSCARG00000037987) zgc:153018 (ENSCARG00000037961) sfxn5b (ENSCARG00000037799) ENSCARG00000037756 BEND4 (ENSCARG00000037731) shisa3 (ENSCARG00000037699) ATP8A1 (ENSCARG00000036298) GRXCR1 (ENSCARG00000036191) Cyprininae ANCESTRAL SPECIES 39 ENSGT00940000157090.g.b ENSGT00950000183174.B.a.f.a.a ENSGT00390000002932.b ENSGT00950000183174.B.a.f.b ENSGT00960000187553.b ENSGT00440000037338 ENSGT00940000154953.a.b ENSGT00940000155249.h.b ENSGT00940000159591.c ENSGT00390000002292.b.c ENSGT00390000013444.a.b.b.b.b ENSGT00940000159375.c.b.b ENSGT00940000161450 ENSGT00940000165784.g ENSGT00940000159921.d.b ENSGT00880000138031.bb.b #22 ENSGT00940000159139.b.b.c ENSGT00940000165913.c ENSGT00940000156457.r ENSGT00940000158249.q.a.a ENSGT00940000166563.b ENSGT00950000183181.A.b.b ENSGT00940000161805.a ENSGT00510000048283.c.a ENSGT01030000234641.a.a.a.a ENSGT00940000158783.a.b.b ENSGT00390000014963.d ENSGT00940000161360.h ENSGT00940000169825 ENSGT00940000161360.g.a ENSGT00940000157110.u Cyprininae_a ANCESTRAL SPECIES 134 ENSGT00390000008183.f ENSGT00940000157090.g.b ENSGT00390000002932.b ENSGT00950000183174.B.a.f.a.a ENSGT00960000187553.b ENSGT00440000037338 ENSGT00940000154953.a.b ENSGT00940000155249.h.b ENSGT00940000159591.c ENSGT00390000002292.b.c ENSGT00390000013444.a.b.b.b.b ENSGT00940000159375.c.b.b ENSGT00940000161450.e ENSGT00940000165784.g ENSGT00940000159921.d.b ENSGT00880000138031.bb.b #22 ENSGT00940000162660.b.b.a.h.a.a.a ENSGT00390000008374.f ENSGT00940000159139.b.b.c ENSGT00940000165913.c ENSGT00940000156457.r ENSGT00940000158249.q.a.a ENSGT00940000166563.b ENSGT00950000183181.A.b.b ENSGT00940000161805.a ENSGT00510000048283.c.a ENSGT01030000234641.a.a.a.a ENSGT00940000158783.a.b.b ENSGT00940000169825 ENSGT00940000161360.g.a ENSGT00940000157110.u Common carp reference MODERN SPECIES 35 mlsl (ENSCCRG00000053088) naa15a (ENSCCRG00000009551) ndufc1 (ENSCCRG00000055485) mgarpa (ENSCCRG00000054287) elf2a (ENSCCRG00000017087) NOCT (ENSCCRG00000017089) ENSCCRG00000049554 slu7 (ENSCCRG00000023503) fermt3b (ENSCCRG00000017116) ENSCCRG00000079536 macrod1 (ENSCCRG00000055938) ccdc88b (ENSCCRG00000082185) rom1b (ENSCCRG00000051241) rarres3l (ENSCCRG00000010025) rarres3l (ENSCCRG00000078946) ENSCCRG00000049044 #22 ENSCCRG00000009619 ENSCCRG00000009610 ubxn1 (ENSCCRG00000029033) ehd1a (ENSCCRG00000052952) ENSCCRG00000009597 ENSCCRG00000062432 ttc9c (ENSCCRG00000064413) zgc:153018 (ENSCCRG00000053864) sfxn5b (ENSCCRG00000009552) ENSCCRG00000055794 shisa3 (ENSCCRG00000080792) ENSCCRG00000047607 GRXCR1 (ENSCCRG00000047460) slc30a9 (ENSCCRG00000045705) zgc:195212 (ENSCCRG00000002082) Goldfish MODERN SPECIES 5 setd7 (ENSCARG00000019552) zgc:113425 (ENSCARG00000019560) rab33ba (ENSCARG00000019573) naa15a (ENSCARG00000019692) ndufc1 (ENSCARG00000021976) elf2a (ENSCARG00000021979) NOCT (ENSCARG00000021986) C1QTNF2 (ENSCARG00000021996) slu7 (ENSCARG00000022015) fermt3b (ENSCARG00000022108) macrod1 (ENSCARG00000022340) FLRT1 (ENSCARG00000022362) ccdc88b (ENSCARG00000022379) rom1b (ENSCARG00000022399) ENSCARG00000022413 ENSCARG00000022482 #22 rarres3l (ENSCARG00000024451) rarres3l (ENSCARG00000024467) INTS5 (ENSCARG00000024522) GANAB (ENSCARG00000024631) ENSCARG00000025682 ubxn1 (ENSCARG00000025708) ehd1a (ENSCARG00000025724) ENSCARG00000025735 ENSCARG00000025739 ttc9c (ENSCARG00000025753) zgc:153018 (ENSCARG00000025815) sfxn5b (ENSCARG00000025852) ENSCARG00000026193 BEND4 (ENSCARG00000026197) SHISA3 (ENSCARG00000026209) Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 94 ENSGT00940000158317.i ENSGT00940000153920.a.a.c ENSGT00940000158123.s ENSGT00940000157638.d ENSGT00950000182835.d.b.a ENSGT00790000123099.e ENSGT00940000156003.l.b.a ENSGT00940000157275.b.e ENSGT00390000005848 ENSGT00940000158165.c ENSGT00940000156334.a.b.b ENSGT00390000003290.d ENSGT00940000155016.eb ENSGT00940000167341 ENSGT00940000160526.h ENSGT00880000138031.cb.a #22 ENSGT01000000214676.b ENSGT00940000164581.A.a.a.c.b ENSGT01030000234535.D.m ENSGT01030000234588.b.b.a.b.a ENSGT01050000244857.A.b.c.b ENSGT00940000155908.a.b ENSGT00940000165002.j ENSGT00940000161075.d ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894.c ENSGT00510000048671.h ENSGT01080000257336.b.e.b.b.a ENSGT01080000257336.b.e.a.a.a ENSGT01080000257336.b.e.a.b.a.b Cyprininae_a ANCESTRAL SPECIES 174 ENSGT00940000158317.i ENSGT00940000153920.a.a.c ENSGT00940000158123.s ENSGT00940000157638.d ENSGT00950000182835.d.b.a ENSGT00790000123099.e ENSGT00940000156003.l.b.a ENSGT00940000157275.b.e ENSGT00390000005848.eb ENSGT00940000158165.c ENSGT00940000156334.a.b.b ENSGT00390000003290.d ENSGT00940000155016.eb ENSGT00940000167341 ENSGT00940000160526.h ENSGT00880000138031.cb.a #22 ENSGT00940000164581.A.a.a.c.b ENSGT01030000234535.D.m ENSGT01030000234588.b.b.a.b.a ENSGT01050000244857.A.b.c.b ENSGT01010000222336.b.a.b.a.f ENSGT00940000155908.a.b ENSGT00940000165002.j ENSGT00940000161075.d ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894.c ENSGT00510000048671.h ENSGT01080000257336.b.e.b.b.a ENSGT01080000257336.b.e.a.a.a ENSGT01080000257336.b.e.a.b.a.b Common carp reference MODERN SPECIES 8 itih2 (ENSCCRG00000034934) ITIH5 (ENSCCRG00000034894) tmem110l (ENSCCRG00000005057) SFMBT2 (ENSCCRG00000040294) prkcq (ENSCCRG00000040328) pfkfb3 (ENSCCRG00000041068) ENSCCRG00000077703 ENSCCRG00000019920 ENSCCRG00000019958 tmcc3 (ENSCCRG00000020190) nr2c1 (ENSCCRG00000078786) fgd6 (ENSCCRG00000050318) vezt (ENSCCRG00000069941) metap2a (ENSCCRG00000050306) usp44 (ENSCCRG00000050303) scyl2 (ENSCCRG00000050302) #22 ENSCCRG00000002369 si:ch211-244b2.4 (ENSCCRG00000031123) st8sia1 (ENSCCRG00000069811) tnni1d (ENSCCRG00000069528) ENSCCRG00000016655 ENSCCRG00000059327 ENSCCRG00000070846 ENSCCRG00000069441 ENSCCRG00000076763 ENSCCRG00000078932 ENSCCRG00000037779 ENSCCRG00000074998 ENSCCRG00000000483 ENSCCRG00000035480 ENSCCRG00000064684 Golden-line barbel MODERN SPECIES 225 SFMBT2 (ENSSGRG00000054563) prkcq (ENSSGRG00000054465) pfkfb3 (ENSSGRG00000054185) rbm17 (ENSSGRG00000054158) ENSSGRG00000054156 ENSSGRG00000054148 tmcc3 (ENSSGRG00000054146) ndufa12 (ENSSGRG00000054145) nr2c1 (ENSSGRG00000054142) fgd6 (ENSSGRG00000054140) vezt (ENSSGRG00000054138) METAP2 (ENSSGRG00000054137) metap2a (ENSSGRG00000054135) usp44 (ENSSGRG00000054133) ENSSGRG00000054130 scyl2 (ENSSGRG00000054093) #22 st8sia1 (ENSSGRG00000054092) tnni1d (ENSSGRG00000054091) ENSSGRG00000054090 acot15 (ENSSGRG00000054072) ENSSGRG00000054063 ENSSGRG00000053978 ENSSGRG00000053974 PARP11 (ENSSGRG00000053973) ENSSGRG00000053972 pyroxd1 (ENSSGRG00000053958) ENSSGRG00000053957 ENSSGRG00000053885 ENSSGRG00000053877 slco1d1 (ENSSGRG00000053840) Goldfish MODERN SPECIES 33 tmem110l (ENSCARG00000001500) SFMBT2 (ENSCARG00000001445) prkcq (ENSCARG00000001349) pfkfb3 (ENSCARG00000000569) rbm17 (ENSCARG00000000160) ENSCARG00000011061 ENSCARG00000011025 ENSCARG00000008773 tmcc3 (ENSCARG00000008631) ENSCARG00000008611 nr2c1 (ENSCARG00000008513) fgd6 (ENSCARG00000008448) vezt (ENSCARG00000008378) metap2a (ENSCARG00000008341) usp44 (ENSCARG00000008326) scyl2 (ENSCARG00000008275) #22 ENSCARG00000008238 st8sia1 (ENSCARG00000008218) tnni1d (ENSCARG00000008201) ENSCARG00000008135 42sp43 (ENSCARG00000008094) ENSCARG00000008085 STAC2 (ENSCARG00000008073) cratb (ENSCARG00000007303) ppt2b (ENSCARG00000007203) ENSCARG00000007183 ENSCARG00000007153 ENSCARG00000007097 tnnt2c (ENSCARG00000007090) si:dkey-222f8.3 (ENSCARG00000007062) braf (ENSCARG00000004724) Cyprininae ANCESTRAL SPECIES 302 ENSGT01010000222336.b.a.b.a.e ENSGT00940000156003.l.b.b ENSGT00940000157275.b.f ENSGT00940000158165.d ENSGT00940000156334.a.b.a ENSGT00390000003290.c ENSGT00940000155016.db.b ENSGT00940000160526.g ENSGT00950000182976.a.a ENSGT00880000138031.cb.b #22 ENSGT01000000214676.a ENSGT00940000164581.A.a.a.c.a ENSGT01030000234535.D.n ENSGT01030000234588.b.b.a.b.b ENSGT01050000244857.A.b.c.a ENSGT00940000155908.a.a ENSGT00940000165002.i ENSGT00940000161075.c ENSGT00390000014894.d ENSGT00510000048671.g ENSGT01080000257336.b.e.b.b.b ENSGT01080000257336.b.e.a.a.b ENSGT01080000257336.b.e.a.b.a.a ENSGT00940000164528 ENSGT01080000257336.b.e.a.b.b Cyprininae_a ANCESTRAL SPECIES 260 ENSGT01010000222336.b.a.b.a.e ENSGT00940000156003.l.b.b ENSGT00940000157275.b.f ENSGT00390000005848.db ENSGT00940000158165.d ENSGT00940000156334.a.b.a ENSGT00390000003290.c ENSGT00940000155016.db.b ENSGT00940000160526.g ENSGT00950000182976.a.a ENSGT00880000138031.cb.b #22 ENSGT01000000214676.a ENSGT00940000164581.A.a.a.c.a ENSGT00940000164581.A.a.a.d ENSGT01030000234535.D.n ENSGT01030000234588.b.b.a.b.b ENSGT01050000244857.A.b.c.a ENSGT00940000155908.a.a ENSGT00940000165002.i ENSGT00940000161075.c ENSGT00390000014894.d ENSGT00510000048671.g ENSGT01080000257336.b.e.b.b.b ENSGT01080000257336.b.e.a.a.b ENSGT01080000257336.b.e.a.b.a.a ENSGT00940000164528 Common carp reference MODERN SPECIES 36 tmem110l (ENSCCRG00000026512) SFMBT2 (ENSCCRG00000047339) prkcq (ENSCCRG00000001063) pfkfb3 (ENSCCRG00000008720) rbm17 (ENSCCRG00000047877) ENSCCRG00000074878 ENSCCRG00000055012 ENSCCRG00000020213 tmcc3 (ENSCCRG00000071733) ndufa12 (ENSCCRG00000020985) nr2c1 (ENSCCRG00000020899) fgd6 (ENSCCRG00000023781) vezt (ENSCCRG00000056090) usp44 (ENSCCRG00000057795) ENSCCRG00000031104 scyl2 (ENSCCRG00000031107) #22 ENSCCRG00000031118 si:ch211-244b2.4 (ENSCCRG00000002364) ENSCCRG00000044659 st8sia1 (ENSCCRG00000031007) tnni1d (ENSCCRG00000031001) ENSCCRG00000066822 ENSCCRG00000078016 ENSCCRG00000022366 ENSCCRG00000022406 ENSCCRG00000022413 ENSCCRG00000052043 ENSCCRG00000016349 slco1d1 (ENSCCRG00000054921) ENSCCRG00000055826 ENSCCRG00000054347 Golden-line barbel MODERN SPECIES 1175 ENSSGRG00000035871 ENSSGRG00000035872 tmcc3 (ENSSGRG00000035874) nr2c1 (ENSSGRG00000035875) fgd6 (ENSSGRG00000035878) ENSSGRG00000036051 vezt (ENSSGRG00000036053) METAP2 (ENSSGRG00000036056) usp44 (ENSSGRG00000036233) scyl2 (ENSSGRG00000036236) #22 ENSSGRG00000036462 si:ch211-244b2.4 (ENSSGRG00000036463) st8sia1 (ENSSGRG00000036466) Characiphysae ANCESTRAL SPECIES 67 ENSGT00940000158317 ENSGT00940000158123 ENSGT00940000157638 ENSGT00950000182835.d.b ENSGT00790000123099 ENSGT01010000222336.b.a.b.a ENSGT00940000156003.l.b ENSGT00940000157275.b ENSGT00390000005848 ENSGT00940000158165 ENSGT00940000156334.a.b ENSGT00390000003290 ENSGT00940000167341 ENSGT00940000160526 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT01030000234535.D ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894 ENSGT00510000048671 ENSGT01080000257336.b.e.b.b ENSGT01080000257336.b.e.a.a ENSGT01080000257336.b.e.a.b Channel catfish DUPLICATION Channel catfish MODERN SPECIES 27 dpf2l (ENSIPUG00000002015) CHRM1 (ENSIPUG00000002079) PSD2 (ENSIPUG00000002104) PURA (ENSIPUG00000002191) nrg2b (ENSIPUG00000002217) eif1ad (ENSIPUG00000002466) ENSIPUG00000002477 Ctsf (ENSIPUG00000002485) trpt1 (ENSIPUG00000002573) fermt3 (ENSIPUG00000002540) macrod1 (ENSIPUG00000002580) FLRT1 (ENSIPUG00000002586) ccdc88b (ENSIPUG00000002599) rom1 (ENSIPUG00000002635) ENSIPUG00000002642 scyl1 (ENSIPUG00000002660) #22 rarres3l (ENSIPUG00000002707) ints5 (ENSIPUG00000002720) ganab (ENSIPUG00000002733) ENSIPUG00000002790 ENSIPUG00000002801 ubxn1 (ENSIPUG00000002804) ehd1a (ENSIPUG00000002819) ENSIPUG00000002840 ENSIPUG00000002844 ttc9c (ENSIPUG00000002852) zgc:153018 (ENSIPUG00000002876) sfxn5b (ENSIPUG00000002897) ENSIPUG00000002927 bend4 (ENSIPUG00000002930) shisa3 (ENSIPUG00000002937) Channel catfish MODERN SPECIES 10 ENSIPUG00000007817 ENSIPUG00000007795 ENSIPUG00000007778 Rbm17 (ENSIPUG00000007699) pfkfb3 (ENSIPUG00000007557) ENSIPUG00000007444 tmcc3 (ENSIPUG00000007412) ndufa12 (ENSIPUG00000007398) nr2c1 (ENSIPUG00000007351) ENSIPUG00000007339 fgd6 (ENSIPUG00000007282) vezt (ENSIPUG00000007243) metap2a (ENSIPUG00000007229) usp44 (ENSIPUG00000007199) depdc4 (ENSIPUG00000007175) SCYL2 (ENSIPUG00000007023) #22 ENSIPUG00000006978 si:ch211-244b2.4 (ENSIPUG00000006970) ST8SIA1 (ENSIPUG00000006940) tnni1d (ENSIPUG00000006896) ENSIPUG00000006879 Trhde (ENSIPUG00000006726) Twf1 (ENSIPUG00000006667) ENSIPUG00000006650 NELL2 (ENSIPUG00000006599) prl2 (ENSIPUG00000006580) nuak1 (ENSIPUG00000006548) ENSIPUG00000006529 plxnb2a.1 (ENSIPUG00000006412) abcc9 (ENSIPUG00000006065) Kcnj8 (ENSIPUG00000006033) Characiphysae_b ANCESTRAL SPECIES 58 ENSGT00940000158317 ENSGT00940000158123 ENSGT00940000157638 ENSGT00950000182835.d.b ENSGT00790000123099 ENSGT01010000222336.b.a.b.a ENSGT00940000156003.l.b ENSGT00940000157275.b ENSGT00390000005848 ENSGT00940000158165 ENSGT00940000156334.a.b ENSGT00390000003290 ENSGT00940000167341 ENSGT00940000160526 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT01030000234535.D ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894 ENSGT00510000048671 ENSGT01080000257336.b.e.b.b ENSGT01080000257336.b.e.a.a ENSGT01080000257336.b.e.a.b Electric eel MODERN SPECIES 70 dpf2l (ENSEEEG00000014163) ENSEEEG00000014152 PSD2 (ENSEEEG00000014147) PURA (ENSEEEG00000014142) nrg2b (ENSEEEG00000014139) ENSEEEG00000014136 eif1ad (ENSEEEG00000014135) ctsf (ENSEEEG00000014133) trpt1 (ENSEEEG00000014131) fermt3b (ENSEEEG00000013444) FLRT1 (ENSEEEG00000013432) macrod1 (ENSEEEG00000013428) ccdc88b (ENSEEEG00000013426) ENSEEEG00000013425 rom1b (ENSEEEG00000013424) ENSEEEG00000013412 #22 ENSEEEG00000013404 Characoidei ANCESTRAL SPECIES 52 ENSGT00940000176663 ENSGT00940000157638 ENSGT00950000182835.d.b ENSGT00790000123099 ENSGT00940000179999 ENSGT01010000222336.b.a.b.a ENSGT00940000156003.l.b ENSGT00940000157275.b ENSGT00390000005848 ENSGT00940000158165 ENSGT00940000156334.a.b ENSGT00390000003290 ENSGT00940000167341 ENSGT00940000160526 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT01030000234535.D ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00940000156857.b ENSGT00940000156857.a ENSGT00390000014894 ENSGT00510000048671 ENSGT01080000257336.b.e.b.b ENSGT01080000257336.b.e.a.a ENSGT01080000257336.b.e.a.b Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 16 dpf2l (ENSAMXG00000034779) CHRM1 (ENSAMXG00000029040) PSD2 (ENSAMXG00000036801) PURA (ENSAMXG00000024949) nrg2b (ENSAMXG00000037440) ENSAMXG00000024947 eif1ad (ENSAMXG00000010537) ctsf (ENSAMXG00000010535) trpt1 (ENSAMXG00000010533) fermt3b (ENSAMXG00000010529) macrod1 (ENSAMXG00000010525) FLRT1 (ENSAMXG00000024946) ccdc88b (ENSAMXG00000010513) rom1b (ENSAMXG00000035900) ENSAMXG00000038577 ENSAMXG00000010505 #22 rarres3l (ENSAMXG00000010501) INTS5 (ENSAMXG00000010497) GANAB (ENSAMXG00000010495) ENSAMXG00000010493 ubxn1 (ENSAMXG00000010489) ehd1a (ENSAMXG00000039344) ENSAMXG00000032005 ENSAMXG00000036702 ttc9c (ENSAMXG00000035405) zgc:153018 (ENSAMXG00000033122) sfxn5b (ENSAMXG00000010465) ENSAMXG00000029127 ENSAMXG00000010458 shisa3 (ENSAMXG00000029444) atp8a1 (ENSAMXG00000013828) Mexicana tetra MODERN SPECIES 22 ENSAMXG00000005894 prkcq (ENSAMXG00000005889) pfkfb3 (ENSAMXG00000005872) rbm17 (ENSAMXG00000005853) ENSAMXG00000035400 acot15 (ENSAMXG00000005831) ENSAMXG00000005792 tmcc3 (ENSAMXG00000005776) ndufa12 (ENSAMXG00000031707) nr2c1 (ENSAMXG00000005769) fgd6 (ENSAMXG00000005764) vezt (ENSAMXG00000005750) metap2a (ENSAMXG00000005738) usp44 (ENSAMXG00000005735) ENSAMXG00000005731 scyl2 (ENSAMXG00000005726) #22 ENSAMXG00000005718 si:ch211-244b2.4 (ENSAMXG00000005707) st8sia1 (ENSAMXG00000005700) tnni1d (ENSAMXG00000017146) ENSAMXG00000005666 ENSAMXG00000005651 ENSAMXG00000005624 ENSAMXG00000038197 PARP11 (ENSAMXG00000039975) ENSAMXG00000005564 pyroxd1 (ENSAMXG00000034660) ENSAMXG00000034981 slco1f3 (ENSAMXG00000005507) ENSAMXG00000031088 slco1d1 (ENSAMXG00000042857) Clupeiformes ANCESTRAL SPECIES 159 ENSGT00600000084428.b #20 ENSGT00940000154572 #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT01000000214676 ENSGT00940000164581.A.a.a.a ENSGT01030000234535.D.o ENSGT01030000234588.b.b.a.b ENSGT01050000244857.A.b ENSGT00940000155908.a ENSGT00940000165002 ENSGT00940000161075 ENSGT00530000063745.b ENSGT00390000006546 ENSGT00440000033504.B.b ENSGT00940000161249 ENSGT00940000167336 ENSGT00620000087961.a.b.a.b.a ENSGT00940000155209.mb Denticle herring MODERN SPECIES 6 SFMBT2 (ENSDCDG00000031052) ankrd16 (ENSDCDG00000031022) gdi2 (ENSDCDG00000031011) dennd6b (ENSDCDG00000030988) fgd6 (ENSDCDG00000030946) vezt (ENSDCDG00000030931) metap2a (ENSDCDG00000030920) usp44 (ENSDCDG00000030917) ntn4 (ENSDCDG00000030914) mrps36 (ENSDCDG00000030913) ENSDCDG00000030911 dimt1l (ENSDCDG00000030900) tcp11l2 (ENSDCDG00000030899) tcp11l2 (ENSDCDG00000030894) DEPDC4 (ENSDCDG00000030889) scyl2 (ENSDCDG00000030867) #22 ENSDCDG00000030860 si:ch211-244b2.4 (ENSDCDG00000030854) st8sia1 (ENSDCDG00000030847) tnni1d (ENSDCDG00000030845) ENSDCDG00000030840 nr2c1 (ENSDCDG00000030829) ndufa12 (ENSDCDG00000030824) tmcc3 (ENSDCDG00000030821) ENSDCDG00000030480 slc26a4 (ENSDCDG00000030416) slc26a3.1 (ENSDCDG00000030168) cbll1 (ENSDCDG00000030160) ENSDCDG00000030158 fam3c (ENSDCDG00000030157) btg1 (ENSDCDG00000030156) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 12 kif11 (ENSCHAG00000023033) pin4 (ENSCHAG00000023021) acsl4a (ENSCHAG00000022333) nxt2 (ENSCHAG00000022296) psmd10 (ENSCHAG00000022275) ENSCHAG00000022266 xiap (ENSCHAG00000022233) STAG2 (ENSCHAG00000020464) thoc2 (ENSCHAG00000018329) gria3b (ENSCHAG00000015907) nlgn3a (ENSCHAG00000015402) ENSCHAG00000015379 plp1a (ENSCHAG00000015365) RAB9B (ENSCHAG00000015356) fut11 (ENSCHAG00000015304) ENSCHAG00000015059 #22 ENSCHAG00000015043 ENSCHAG00000015010 ENSCHAG00000014972 ENSCHAG00000014917 INTS5 (ENSCHAG00000014893) GANAB (ENSCHAG00000012246) ENSCHAG00000012100 ubxn1 (ENSCHAG00000012070) ENSCHAG00000012055 ENSCHAG00000012046 dnajc4 (ENSCHAG00000012035) nudt22 (ENSCHAG00000012025) ENSCHAG00000011917 stx5a (ENSCHAG00000011382) zgc:162144 (ENSCHAG00000011367) Atlantic herring MODERN SPECIES 7 ENSCHAG00000005722 ENSCHAG00000005738 DMD (ENSCHAG00000006135) pcnp (ENSCHAG00000017108) ENSCHAG00000017114 ENSCHAG00000017118 ENSCHAG00000017129 ENSCHAG00000017314 MPC2 (ENSCHAG00000017334) acadl (ENSCHAG00000017342) UNC80 (ENSCHAG00000017395) ENSCHAG00000017564 scyl2 (ENSCHAG00000017594) #22 st8sia1 (ENSCHAG00000017767) tnni1d (ENSCHAG00000017776) ENSCHAG00000017794 ENSCHAG00000018353 ENSCHAG00000018624 mettl25 (ENSCHAG00000018710) ccdc59 (ENSCHAG00000018719) CRACR2A (ENSCHAG00000018730) ENSCHAG00000018785 ENSCHAG00000018926 cacna2d1a (ENSCHAG00000018976) hgfa (ENSCHAG00000019773) pax4 (ENSCHAG00000019888) snd1 (ENSCHAG00000019912) LRRC4 (ENSCHAG00000020961) Osteoglossiformes ANCESTRAL SPECIES 224 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #13 ENSGT00600000084428.b #20 ENSGT00940000154572.c #18 ENSGT00940000157710 #14 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #21 ENSGT00950000182976.a.a ENSGT00880000138031 #22 ENSGT00940000164581.A.a.a ENSGT00940000166611 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00390000010777 ENSGT00390000006088 ENSGT00940000159081 ENSGT00530000064100 ENSGT00390000006349 ENSGT00950000183062.a.b.a.b ENSGT00950000182952.B.f ENSGT00940000163908 ENSGT00940000159117 ENSGT00940000156872.c ENSGT00390000005294 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 4 kat5b (ENSSFOG00015005779) ENSSFOG00015005814 ZBTB3 (ENSSFOG00015005836) trpt1 (ENSSFOG00015005844) FERMT3 (ENSSFOG00015005866) stip1 (ENSSFOG00015005908) FLRT1 (ENSSFOG00015005985) macrod1 (ENSSFOG00015005972) rps6ka4 (ENSSFOG00015005989) ccdc88b (ENSSFOG00015006038) ENSSFOG00015027781 rom1b (ENSSFOG00015006065) ENSSFOG00015033319 ENSSFOG00015006092 zfpl1 (ENSSFOG00015006119) ENSSFOG00015006184 #22 ENSSFOG00015006233 INTS5 (ENSSFOG00015006265) GANAB (ENSSFOG00015006271) ENSSFOG00015006365 ubxn1 (ENSSFOG00015006412) CNIH2 (ENSSFOG00015031324) ehd1a (ENSSFOG00015019587) ENSSFOG00015006504 ENSSFOG00015030992 ttc9c (ENSSFOG00015006527) zgc:153018 (ENSSFOG00015006530) ENSSFOG00015006544 adssl (ENSSFOG00015006559) nudt22 (ENSSFOG00015006602) dnajc4 (ENSSFOG00015024696) Asian bonytongue MODERN SPECIES 11 slc26a3.1 (ENSSFOG00015000298) slc26a4 (ENSSFOG00015000396) ENSSFOG00015000409 ENSSFOG00015026922 mcat (ENSSFOG00015000457) pacsin2 (ENSSFOG00015000469) arfgap3 (ENSSFOG00015000529) IKBIP (ENSSFOG00015000593) #13 uhrf1bp1l (ENSSFOG00015000671) #20 anks1b (ENSSFOG00015000686) #18 apaf1 (ENSSFOG00015000841) #14 ENSSFOG00015000863 tcp11l2 (ENSSFOG00015000867) actr6 (ENSSFOG00015000878) #21 ENSSFOG00015000921 scyl2 (ENSSFOG00015000976) #22 si:ch211-244b2.4 (ENSSFOG00015001068) ascl1a (ENSSFOG00015027323) pah (ENSSFOG00015001109) th2 (ENSSFOG00015001175) nup37 (ENSSFOG00015001235) parpbp (ENSSFOG00015001286) ENSSFOG00015001300 igf1 (ENSSFOG00015001317) washc3 (ENSSFOG00015025745) dram1 (ENSSFOG00015033198) #37 gnptab (ENSSFOG00015001407) #36 sycp3 (ENSSFOG00015001502) #35 chpt1 (ENSSFOG00015001512) #34 mybpc1 (ENSSFOG00015001575) #33 spic (ENSSFOG00015001658) #32 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 334 dusp1 (ENSPKIG00000008245) neurl1b (ENSPKIG00000008278) ZBTB3 (ENSPKIG00000008304) trpt1 (ENSPKIG00000008323) FERMT3 (ENSPKIG00000008366) stip1 (ENSPKIG00000008434) MACROD1 (ENSPKIG00000008514) FLRT1 (ENSPKIG00000008574) rps6ka4 (ENSPKIG00000008619) ccdc88b (ENSPKIG00000008694) ENSPKIG00000008727 ENSPKIG00000008742 rom1b (ENSPKIG00000008770) zfpl1 (ENSPKIG00000008808) ENSPKIG00000008833 ENSPKIG00000008898 #22 ENSPKIG00000008962 ENSPKIG00000008990 P. kingsleyae MODERN SPECIES 158 uhrf1bp1l (ENSPKIG00000005505) #20 anks1b (ENSPKIG00000005619) #18 ENSPKIG00000005743 apaf1 (ENSPKIG00000005791) #14 ENSPKIG00000005922 tcp11l2 (ENSPKIG00000005943) actr6 (ENSPKIG00000005971) #21 ENSPKIG00000005995 scyl2 (ENSPKIG00000006047) #22 ascl1a (ENSPKIG00000006153) pah (ENSPKIG00000006179) th2 (ENSPKIG00000006229) nup37 (ENSPKIG00000006278) parpbp (ENSPKIG00000006315) igf1 (ENSPKIG00000006362) washc3 (ENSPKIG00000006403) dram1 (ENSPKIG00000006429) #37 gnptab (ENSPKIG00000006461) #36 chpt1 (ENSPKIG00000006521) #34 mybpc1 (ENSPKIG00000006680) #33 spic (ENSPKIG00000007092) #32 arl1 (ENSPKIG00000007118) #31 UTP20 (ENSPKIG00000007196) #30 SLC5A8 (ENSPKIG00000007438) #29 Elephant shark MODERN SPECIES 1524 ENSCMIG00000010308 ENSCMIG00000010311 ENSCMIG00000010315 krr1 (ENSCMIG00000010336) ENSCMIG00000010380 phlda1 (ENSCMIG00000010385) nap1l1 (ENSCMIG00000010401) OSBPL8 (ENSCMIG00000010624) zdhhc17 (ENSCMIG00000011045) ENSCMIG00000011059 nav3 (ENSCMIG00000011099) syt1a (ENSCMIG00000011214) PAWR (ENSCMIG00000011235) ppp1r12a (ENSCMIG00000011246) DEPDC4 (ENSCMIG00000011260) scyl2 (ENSCMIG00000011280) #22 ASCL1 (ENSCMIG00000011305) pah (ENSCMIG00000011328) th2 (ENSCMIG00000011400) IGF1 (ENSCMIG00000011437) parpbp (ENSCMIG00000011442) nup37 (ENSCMIG00000011451) washc3 (ENSCMIG00000011463) DRAM1 (ENSCMIG00000011465) #37 gnptab (ENSCMIG00000011481) #36 CHPT1 (ENSCMIG00000011518) #34 mybpc1 (ENSCMIG00000011645) #33 ENSCMIG00000012307 #32 arl1 (ENSCMIG00000012315) #31 ENSCMIG00000012322 stk38l (ENSCMIG00000012330) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00880000138031.a #22 Hagfish MODERN SPECIES 1534 ENSEBUG00000012183 ENSEBUG00000012790 slc35c1 (ENSEBUG00000004578) ENSEBUG00000007859 #22 tusc2b (ENSEBUG00000011377) ENSEBUG00000005955 ENSEBUG00000004370 ENSEBUG00000001007 ENSEBUG00000013373 ENSEBUG00000002831 ENSEBUG00000002581 ENSEBUG00000003846 ENSEBUG00000007964 ENSEBUG00000007112 Cyclostomata ANCESTRAL SPECIES ENSGT00880000138031.b #22 Lamprey MODERN SPECIES 2080 scyl2 (ENSPMAG00000003073) #22 Hagfish DUPLICATION Hagfish MODERN SPECIES 387 ENSEBUG00000015507 #22 tdo2b (ENSEBUG00000016418) ENSEBUG00000003918 ENSEBUG00000011338 ENSEBUG00000002565 ENSEBUG00000008470 GLRB (ENSEBUG00000013354) Hagfish MODERN SPECIES 661 ENSEBUG00000007852 #22 MPPED2 (ENSEBUG00000005968) ENSEBUG00000006041 ENSEBUG00000001001 ENSEBUG00000012275 ENSEBUG00000006115 ENSEBUG00000007796 Ciona ANCESTRAL SPECIES ENSGT00880000138031 #22 Ciona savignyi MODERN SPECIES 55 ENSCSAVG00000009437 ENSCSAVG00000009432 ENSCSAVG00000009416 ENSCSAVG00000009399 ENSCSAVG00000009397 ENSCSAVG00000009393 ENSCSAVG00000009391 ENSCSAVG00000009386 ENSCSAVG00000009333 ENSCSAVG00000009299 ENSCSAVG00000009212 ENSCSAVG00000009210 ENSCSAVG00000009207 ENSCSAVG00000009205 ENSCSAVG00000009202 ENSCSAVG00000009187 #22 ENSCSAVG00000009182 ENSCSAVG00000009173 ENSCSAVG00000009171 ENSCSAVG00000009168 ENSCSAVG00000009116 ENSCSAVG00000009105 Ciona intestinalis MODERN SPECIES ENSCING00000024332 ENSCING00000006406 ENSCING00000006263 ENSCING00000006254 ENSCING00000006244 ENSCING00000022109 ENSCING00000006242 ENSCING00000001153 ENSCING00000012485 ENSCING00000012486 ENSCING00000001167 ENSCING00000024194 ENSCING00000019445 ENSCING00000022558 ENSCING00000011905 ENSCING00000001174 #22 ENSCING00000012489 ENSCING00000007603 ENSCING00000024429 ENSCING00000020268 ENSCING00000019006 ENSCING00000019984 ENSCING00000007583 ENSCING00000019032 ENSCING00000009949 ENSCING00000007601 ENSCING00000007602 ENSCING00000012491 ENSCING00000012490 ENSCING00000022882 ENSCING00000007582