Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000157731 #7	ENSGT00970000193372.b.i #8	ENSGT00390000010895 #9	ENSGT00390000013776 #10	ENSGT00940000155954.a #12	ENSGT00390000008142.p #11	ENSGT01030000234582.e.a #13	ENSGT00530000063489.a #14	ENSGT00940000159500 #15	ENSGT00960000192284	ENSGT00940000156504 #16	ENSGT00940000156948 #17	ENSGT00940000159765 #18	ENSGT00940000158471 #19	ENSGT00390000005935 #20	ENSGT00940000156702.b #22	ENSGT00390000016940.c.b #21	ENSGT01050000244857.B.b #23	ENSGT00940000159052 #24	ENSGT00940000157018 #25	ENSGT00940000161126 #26	ENSGT00940000155522 #27	ENSGT00390000003164 #28	ENSGT00390000008124 #29	ENSGT00940000154095.b.b #30	ENSGT00940000160220 #31	ENSGT00900000143748	ENSGT00950000183165.a #33	ENSGT00550000075037 #34	ENSGT00950000182942.a.b #35	ENSGT00390000005911 #36
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000157731 #7	ENSGT00970000193372.b.i #8	ENSGT00390000010895 #9	ENSGT00390000013776 #10	ENSGT00940000155954.a #12	ENSGT00390000008142.p #11	ENSGT01030000234582.e.a #13	ENSGT00530000063489.a #14	ENSGT00940000159500 #15	ENSGT00960000192284	ENSGT00940000156504 #16	ENSGT00940000156948 #17	ENSGT00940000159765 #18	ENSGT00940000158471 #19	ENSGT00390000005935 #20	ENSGT00940000156702.b #22	ENSGT00390000016940.c.b #21	ENSGT01050000244857.B.b #23	ENSGT00940000159052 #24	ENSGT00940000157018 #25	ENSGT00940000161126 #26	ENSGT00940000155522 #27	ENSGT00390000003164 #28	ENSGT00390000008124 #29	ENSGT00940000154095.b.b #30	ENSGT00940000160220 #31	ENSGT00860000135603 #32	ENSGT00950000183165.a #33	ENSGT00550000075037 #34	ENSGT00950000182942.a.b #35	ENSGT00390000005911 #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000157731 #7	ENSGT00970000193372.b.i #8	ENSGT00390000010895 #9	ENSGT00390000013776 #10	ENSGT00940000155954.a #12	ENSGT00390000008142.p #11	ENSGT01030000234582.e.a #13	ENSGT00530000063489.a #14	ENSGT00940000159500 #15	ENSGT00960000192284	ENSGT00940000156504 #16	ENSGT00940000156948 #17	ENSGT00940000159765 #18	ENSGT00940000158471 #19	ENSGT00390000005935 #20	ENSGT00940000156702.b #22	ENSGT00390000016940.c.b #21	ENSGT01050000244857.B.b #23	ENSGT00940000159052 #24	ENSGT00940000157018 #25	ENSGT00940000161126 #26	ENSGT00940000155522 #27	ENSGT00390000003164 #28	ENSGT00390000008124 #29	ENSGT00940000154095.b.b #30	ENSGT00940000160220 #31	ENSGT00860000135603 #32	ENSGT00950000183165.a #33	ENSGT00550000075037 #34	ENSGT00950000182942.a.b #35	ENSGT00390000005911 #36
spretus	MODERN SPECIES		Wdfy1 (MGP_SPRETEiJ_G0015123) #7	MGP_SPRETEiJ_G0015122 #8	Scg2 (MGP_SPRETEiJ_G0015121) #9	Kcne4 (MGP_SPRETEiJ_G0015120) #10	Utp14b (MGP_SPRETEiJ_G0015119) #11	Acsl3 (MGP_SPRETEiJ_G0015118) #12	Mogat1 (MGP_SPRETEiJ_G0015117) #13	Farsb (MGP_SPRETEiJ_G0015116) #14	Sgpp2 (MGP_SPRETEiJ_G0015115) #15	Pax3 (MGP_SPRETEiJ_G0015114) #16	Epha4 (MGP_SPRETEiJ_G0015113) #17	Slc4a3 (MGP_SPRETEiJ_G0015112) #18	Stk11ip (MGP_SPRETEiJ_G0015111) #19	Inha (MGP_SPRETEiJ_G0015110) #20	Tmem198 (MGP_SPRETEiJ_G0015109) #21	Obsl1 (MGP_SPRETEiJ_G0015108) #22	Chpf (MGP_SPRETEiJ_G0015107) #23	Asic4 (MGP_SPRETEiJ_G0015106) #24	Gmppa (MGP_SPRETEiJ_G0015105) #25	Speg (MGP_SPRETEiJ_G0015104) #26	Des (MGP_SPRETEiJ_G0015103) #27	Dnpep (MGP_SPRETEiJ_G0015102) #28	Resp18 (MGP_SPRETEiJ_G0015101) #29	Ptprn (MGP_SPRETEiJ_G0015100) #30	Dnajb2 (MGP_SPRETEiJ_G0015099) #31	A630095N17Rik (MGP_SPRETEiJ_G0015098) #32	Tuba4a (MGP_SPRETEiJ_G0015097) #33	Stk16 (MGP_SPRETEiJ_G0015096) #34	Glb1l (MGP_SPRETEiJ_G0015095) #35	Ankzf1 (MGP_SPRETEiJ_G0015094) #36	Atg9a (MGP_SPRETEiJ_G0015093) #37
Steppe mouse	MODERN SPECIES	3423			ENSMSIG00000016891	Acsl3 (ENSMSIG00000016905) #12	Mogat1 (ENSMSIG00000016976) #13	Farsb (ENSMSIG00000017012) #14	Sgpp2 (ENSMSIG00000017051) #15	ENSMSIG00000017076	Pax3 (ENSMSIG00000017085) #16	Epha4 (ENSMSIG00000017156) #17	ENSMSIG00000017191	ENSMSIG00000017220	Slc4a3 (ENSMSIG00000017254) #18	Stk11ip (ENSMSIG00000017295) #19	Inha (ENSMSIG00000017359) #20	Obsl1 (ENSMSIG00000017366) #22	Chpf (ENSMSIG00000017426) #23	Tmem198 (ENSMSIG00000017448) #21	Asic4 (ENSMSIG00000017477) #24	Gmppa (ENSMSIG00000017541) #25	Speg (ENSMSIG00000017581) #26	Des (ENSMSIG00000017790) #27	Dnpep (ENSMSIG00000017815) #28	Resp18 (ENSMSIG00000017975) #29	Ptprn (ENSMSIG00000017991) #30	Dnajb2 (ENSMSIG00000018086) #31	A630095N17Rik (ENSMSIG00000018152) #32	Tuba4a (ENSMSIG00000018170) #33	Stk16 (ENSMSIG00000018185) #34	Glb1l (ENSMSIG00000018199) #35	Ankzf1 (ENSMSIG00000018229) #36
Mouse	MODERN SPECIES		Ap1s3 (ENSMUSG00000054702) #8	Scg2 (ENSMUSG00000050711) #9	Kcne4 (ENSMUSG00000047330) #10	Utp14b (ENSMUSG00000079470) #11	Acsl3 (ENSMUSG00000032883) #12	Mogat1 (ENSMUSG00000012187) #13	BC035947 (ENSMUSG00000090486)	Farsb (ENSMUSG00000026245) #14	Sgpp2 (ENSMUSG00000032908) #15	Pax3 (ENSMUSG00000004872) #16	Epha4 (ENSMUSG00000026235) #17	Slc4a3 (ENSMUSG00000006576) #18	Stk11ip (ENSMUSG00000026213) #19	Inha (ENSMUSG00000032968) #20	Tmem198 (ENSMUSG00000051703) #21	Obsl1 (ENSMUSG00000026211) #22	Chpf (ENSMUSG00000032997) #23	Asic4 (ENSMUSG00000033007) #24	Gmppa (ENSMUSG00000033021) #25	Speg (ENSMUSG00000026207) #26	Des (ENSMUSG00000026208) #27	Dnpep (ENSMUSG00000026209) #28	Resp18 (ENSMUSG00000033061) #29	Ptprn (ENSMUSG00000026204) #30	Dnajb2 (ENSMUSG00000026203) #31	A630095N17Rik (ENSMUSG00000096094) #32	Tuba4a (ENSMUSG00000026202) #33	Stk16 (ENSMUSG00000026201) #34	Glb1l (ENSMUSG00000026200) #35	Ankzf1 (ENSMUSG00000026199) #36	Atg9a (ENSMUSG00000033124) #37
Ryukyu mouse	MODERN SPECIES		Wdfy1 (MGP_CAROLIEiJ_G0014317) #7	MGP_CAROLIEiJ_G0014316 ##8	Scg2 (MGP_CAROLIEiJ_G0014315) #9	Kcne4 (MGP_CAROLIEiJ_G0014314) #10	MGP_CAROLIEiJ_G0014313 #11	Acsl3 (MGP_CAROLIEiJ_G0014312) #12	Mogat1 (MGP_CAROLIEiJ_G0014311) #13	Farsb (MGP_CAROLIEiJ_G0014310) #14	Sgpp2 (MGP_CAROLIEiJ_G0014309) #15	Pax3 (MGP_CAROLIEiJ_G0014308) #16	Epha4 (MGP_CAROLIEiJ_G0014307) #17	Slc4a3 (MGP_CAROLIEiJ_G0014306) #18	Stk11ip (MGP_CAROLIEiJ_G0014305) #19	Inha (MGP_CAROLIEiJ_G0014304) #20	Tmem198 (MGP_CAROLIEiJ_G0014303) #21	Obsl1 (MGP_CAROLIEiJ_G0014302) #22	Chpf (MGP_CAROLIEiJ_G0014301) #23	Asic4 (MGP_CAROLIEiJ_G0014300) #24	MGP_CAROLIEiJ_G0014299 #25	Speg (MGP_CAROLIEiJ_G0014298) #26	Des (MGP_CAROLIEiJ_G0014297) #27	Dnpep (MGP_CAROLIEiJ_G0014296) #28	Resp18 (MGP_CAROLIEiJ_G0014295) #29	Ptprn (MGP_CAROLIEiJ_G0014294) #30	Dnajb2 (MGP_CAROLIEiJ_G0014293) #31	MGP_CAROLIEiJ_G0014292	Tuba4a (MGP_CAROLIEiJ_G0014291) #33	Stk16 (MGP_CAROLIEiJ_G0014290) #34	Glb1l (MGP_CAROLIEiJ_G0014289) #35	Ankzf1 (MGP_CAROLIEiJ_G0014288) #36	Atg9a (MGP_CAROLIEiJ_G0014287) #37