Amniota	ANCESTRAL SPECIES	5	ENSGT00390000003290 #7	ENSGT00940000173218	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b	ENSGT00940000155352	ENSGT00640000091574
Mammalia	ANCESTRAL SPECIES	8	ENSGT00390000003290 #7	ENSGT00940000173218	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b	ENSGT00940000155352	ENSGT00640000091574
Theria	ANCESTRAL SPECIES	2	ENSGT00390000003290 #7	ENSGT00940000173218	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b	ENSGT00940000155352
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000173218	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00430000032851 #20	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b	ENSGT00940000155352
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00900000143786	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00430000032851 #20	ENSGT00410000029301	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00540000073882 #33	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000173218	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00900000143786	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491 #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00540000073882 #33	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00900000143786	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491.lb #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00430000032851 #20	ENSGT00410000029301	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00540000073882 #33	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00900000143786	ENSGT00390000014448	ENSGT00940000157983 #14	ENSGT00390000010491.lb #16	ENSGT00540000070023.c.b.b ##17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00430000032851 #20	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00540000073882 #33	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00390000003290 #7	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275 #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00940000157983 #14	ENSGT00390000010491.lb #16	ENSGT00540000070023.c.b.b ##17	ENSGT00540000070023.d.m.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00430000032851 #20	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00540000073882 #33	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b
Equus	ANCESTRAL SPECIES	21	ENSGT00390000003290 #7	ENSGT00940000156334 #8	ENSGT00940000158165 #9	ENSGT00390000005848 #10	ENSGT00940000157275.c #11	ENSGT00940000154003.A #12	ENSGT01020000230394.e.a.a.b.a.a.b.a.b #13	ENSGT00940000157983 #14	ENSGT00390000010491.lb #16	ENSGT00540000070023.c.a.a #35	ENSGT00540000070023.d.m.b #17	ENSGT00940000155210.a.b #18	ENSGT00940000156910 #21	ENSGT00510000046843.b #19	ENSGT00430000032851 #20	ENSGT00950000182952.C #22	ENSGT00940000158382 #23	ENSGT00940000158177.b #24	ENSGT00940000158968 #25	ENSGT00940000157574 #26	ENSGT00730000111529 #27	ENSGT00940000158686 #31	ENSGT00940000163607 #32	ENSGT00940000160413	ENSGT00540000073882 #33	ENSGT00940000158342.b #34	ENSGT00390000018272 #36	ENSGT00940000157538 #37	ENSGT00730000111039.C	ENSGT00500000044938	ENSGT00920000149095.b
Horse	MODERN SPECIES	20	VEZT (ENSECAG00000002783) #7	FGD6 (ENSECAG00000021075) #8	NR2C1 (ENSECAG00000000645) #9	NDUFA12 (ENSECAG00000015836) #10	TMCC3 (ENSECAG00000011697) #11	CEP83 (ENSECAG00000008428) #12	PLXNC1 (ENSECAG00000022971) #13	SOCS2 (ENSECAG00000006833) #14	ENSECAG00000053683 #15	MRPL42 (ENSECAG00000026888) #16	ENSECAG00000019597 #17	NUDT4 (ENSECAG00000019319) #18	PLEKHG7 (ENSECAG00000000374) #19	ENSECAG00000056644 #20	EEA1 (ENSECAG00000007262) #21	BTG1 (ENSECAG00000031980) #22	DCN (ENSECAG00000020413) #23	LUM (ENSECAG00000018248) #24	KERA (ENSECAG00000017668) #25	EPYC (ENSECAG00000015607) #26	CCER1 (ENSECAG00000015541) #27	ENSECAG00000058662 #28	ENSECAG00000045962 #29	ENSECAG00000049161 #30	ATP2B1 (ENSECAG00000008450) #31	POC1B (ENSECAG00000013326) #32	ENSECAG00000046638 #33	DUSP6 (ENSECAG00000037937) #34	UBE2N (ENSECAG00000009937) #35	KITLG (ENSECAG00000000152) #36	TMTC3 (ENSECAG00000020616) #37