Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000161877.i ##10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00390000014105.n #29	ENSGT00940000155255.q.b #30	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00390000014105.n #29	ENSGT00940000155255.q.b #30	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36
Narwhal	MODERN SPECIES	299	CST7 (ENSMMNG00015013746) #7	SYNDIG1 (ENSMMNG00015013754) #8	CST3 (ENSMMNG00015013767) #9	ENSMMNG00015013782 #10	ENSMMNG00015013807 #11	CST11 (ENSMMNG00015013816) #12	CSTL1 (ENSMMNG00015013827) #13	ENSMMNG00015013840 #14	GZF1 (ENSMMNG00015013857) #15	NXT1 (ENSMMNG00015013866) #16	CD93 (ENSMMNG00015013869) #17	THBD (ENSMMNG00015013881) #18	SSTR4 (ENSMMNG00015013888) #19	FOXA2 (ENSMMNG00015013909) #20	PAX1 (ENSMMNG00015013924) #21	NKX2-2 (ENSMMNG00015013937) #22	NKX2-4 (ENSMMNG00015013943) #23	XRN2 (ENSMMNG00015013954) #24	KIZ (ENSMMNG00015014032) #25	RALGAPA2 (ENSMMNG00015014137) #26	INSM1 (ENSMMNG00015014194) #27	CFAP61 (ENSMMNG00015014206) #28	ENSMMNG00015014237 #29	ENSMMNG00015014247 #30	CRNKL1 (ENSMMNG00015014256) #31	NAA20 (ENSMMNG00015014274) #32	RIN2 (ENSMMNG00015014306) #33	SLC24A3 (ENSMMNG00015014333) #34	SCP2D1 (ENSMMNG00015014357) #35	DTD1 (ENSMMNG00015014368) #36	SMIM26 (ENSMMNG00015014382) #37
Beluga whale	MODERN SPECIES	48	SYNDIG1 (ENSDLEG00000004982) #8	CST3 (ENSDLEG00000004985) #9	ENSDLEG00000005018 #10	ENSDLEG00000005035 #11	ENSDLEG00000005044	CST11 (ENSDLEG00000005067) #12	CSTL1 (ENSDLEG00000005075) #13	ENSDLEG00000005080 #14	GZF1 (ENSDLEG00000005091) #15	NXT1 (ENSDLEG00000005096) #16	CD93 (ENSDLEG00000005100) #17	THBD (ENSDLEG00000005104) #18	SSTR4 (ENSDLEG00000005108) #19	FOXA2 (ENSDLEG00000005115) #20	PAX1 (ENSDLEG00000005123) #21	NKX2-2 (ENSDLEG00000005132) #22	NKX2-4 (ENSDLEG00000005154) #23	XRN2 (ENSDLEG00000005166) #24	KIZ (ENSDLEG00000005207) #25	RALGAPA2 (ENSDLEG00000005252) #26	CFAP61 (ENSDLEG00000005301) #28	ENSDLEG00000005319 #29	ENSDLEG00000005324 #30	CRNKL1 (ENSDLEG00000005333) #31	NAA20 (ENSDLEG00000005370) #32	RIN2 (ENSDLEG00000005378) #33	SLC24A3 (ENSDLEG00000005408) #34	ENSDLEG00000005476	SCP2D1 (ENSDLEG00000005480) #35	DTD1 (ENSDLEG00000005506) #36	SMIM26 (ENSDLEG00000005510) #37
Vaquita	MODERN SPECIES	6	ACSS1 (ENSPSNG00000010625)	APMAP (ENSPSNG00000010757)	CST7 (ENSPSNG00000010836) #7	SYNDIG1 (ENSPSNG00000010897) #8	CST3 (ENSPSNG00000010957) #9	ENSPSNG00000011009 #10	ENSPSNG00000011147 #11	ENSPSNG00000011208 #14	GZF1 (ENSPSNG00000011314) #15	NXT1 (ENSPSNG00000011355) #16	CD93 (ENSPSNG00000011407) #17	THBD (ENSPSNG00000011441) #18	SSTR4 (ENSPSNG00000011467) #19	FOXA2 (ENSPSNG00000004696) #20	PAX1 (ENSPSNG00000004773) #21	NKX2-2 (ENSPSNG00000004832) #22	NKX2-4 (ENSPSNG00000004868) #23	XRN2 (ENSPSNG00000004918) #24	KIZ (ENSPSNG00000005041) #25	ENSPSNG00000005168 #26	ENSPSNG00000005197 #26	INSM1 (ENSPSNG00000005223) #27	ENSPSNG00000005235	ENSPSNG00000005250 #28	ENSPSNG00000005292 #28	BLCAP (ENSPSNG00000005346) #29	ENSPSNG00000005363 #30	CRNKL1 (ENSPSNG00000005386) #31	NAA20 (ENSPSNG00000005428) #32	RIN2 (ENSPSNG00000005508) #33	SLC24A3 (ENSPSNG00000005554) #34
Dolphin	MODERN SPECIES	2997																NKX2-2 (ENSTTRG00000009146) #22	XRN2 (ENSTTRG00000009087) #24	KIZ (ENSTTRG00000009024) #25
Sperm whale	MODERN SPECIES	5	APMAP (ENSPCTG00005009088)	CST7 (ENSPCTG00005009166) #7	ENSPCTG00005009228 #8	ENSPCTG00005009273 #14	CSTL1 (ENSPCTG00005009306) #13	CST11 (ENSPCTG00005009381) #12	ENSPCTG00005009442	ENSPCTG00005009487 #11	ENSPCTG00005009530 ##10	ENSPCTG00005009585 #10	CST3 (ENSPCTG00005009637) #9	CD93 (ENSPCTG00005009671) #17	SSTR4 (ENSPCTG00005009716) #19	FOXA2 (ENSPCTG00005009780) #20	PAX1 (ENSPCTG00005009858) #21	NKX2-2 (ENSPCTG00005009931) #22	NKX2-4 (ENSPCTG00005009959) #23	XRN2 (ENSPCTG00005010006) #24	KIZ (ENSPCTG00005010162) #25	RALGAPA2 (ENSPCTG00005010848) #26	INSM1 (ENSPCTG00005011042) #27	CFAP61 (ENSPCTG00005011086) #28	CRNKL1 (ENSPCTG00005011230) #31	NAA20 (ENSPCTG00005011278) #32	ENSPCTG00005011375 #33	SLC24A3 (ENSPCTG00005011433) #34	SCP2D1 (ENSPCTG00005011622) #35	DTD1 (ENSPCTG00005011639) #36	SMIM26 (ENSPCTG00005011687) #37	SEC23B (ENSPCTG00005011745)	RBBP9 (ENSPCTG00005011839)
Blue whale	MODERN SPECIES	6	ENSBMSG00010012402 #11	CST8 (ENSBMSG00010012422)	ENSBMSG00010012475	ENSBMSG00010012491	CST11 (ENSBMSG00010012502) #12	CSTL1 (ENSBMSG00010012521) #13	NAPB (ENSBMSG00010012544) #14	ENSBMSG00010012568 #15	ENSBMSG00010012580 #15	NXT1 (ENSBMSG00010012589) #16	CD93 (ENSBMSG00010012595) #17	THBD (ENSBMSG00010012612) #18	SSTR4 (ENSBMSG00010013828) #19	FOXA2 (ENSBMSG00010013859) #20	PAX1 (ENSBMSG00010013891) #21	NKX2-2 (ENSBMSG00010013921) #22	NKX2-4 (ENSBMSG00010013938) #23	XRN2 (ENSBMSG00010014058) #24	KIZ (ENSBMSG00010014281) #25	RALGAPA2 (ENSBMSG00010014396) #26	INSM1 (ENSBMSG00010014572) #27	CFAP61 (ENSBMSG00010014638) #28	CRNKL1 (ENSBMSG00010014711) #31	NAA20 (ENSBMSG00010014762) #32	RIN2 (ENSBMSG00010014833) #33	SLC24A3 (ENSBMSG00010014883) #34	DTD1 (ENSBMSG00010014971) #36	SMIM26 (ENSBMSG00010015007) #37	SEC23B (ENSBMSG00010015074)	RBBP9 (ENSBMSG00010015177)	POLR3F (ENSBMSG00010015197)
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000161877.j #10	ENSGT00940000161877.i ##10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c
Yarkand deer	MODERN SPECIES	15	ENSCHYG00000023900	ENSCHYG00000023874	ENSCHYG00000023860	ENSCHYG00000023824 #12	ENSCHYG00000023804 #13	NAPB (ENSCHYG00000023659) #14	GZF1 (ENSCHYG00000023598) #15	NXT1 (ENSCHYG00000023576) #16	CD93 (ENSCHYG00000023556) #17	THBD (ENSCHYG00000023542) #18	ENSCHYG00000023501	ENSCHYG00000023462	FOXA2 (ENSCHYG00000023420) #20	PAX1 (ENSCHYG00000023364) #21	ENSCHYG00000023344	NKX2-2 (ENSCHYG00000023304) #22	NKX2-4 (ENSCHYG00000023282) #23	XRN2 (ENSCHYG00000022819) #24	ENSCHYG00000022761	ENSCHYG00000022734	KIZ (ENSCHYG00000022176) #25	RALGAPA2 (ENSCHYG00000021147) #26	INSM1 (ENSCHYG00000021030) #27	CFAP61 (ENSCHYG00000020914) #28	CRNKL1 (ENSCHYG00000020782) #31	NAA20 (ENSCHYG00000020635) #32	RIN2 (ENSCHYG00000020319) #33	ENSCHYG00000020275	SLC24A3 (ENSCHYG00000020129) #34	SCP2D1 (ENSCHYG00000020102) #35	DTD1 (ENSCHYG00000019989) #36
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000161877.j #10	ENSGT00940000161877.i ##10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c
Siberian musk deer	MODERN SPECIES	1194	CST3 (ENSMMSG00000018564) #9	ENSMMSG00000018584 #10	ENSMMSG00000018603 #11	CST8 (ENSMMSG00000018626)	ENSMMSG00000018653	ENSMMSG00000018676	ENSMMSG00000018712 #12	CSTL1 (ENSMMSG00000018731) #13	NAPB (ENSMMSG00000018763) #14	GZF1 (ENSMMSG00000018836) #15	NXT1 (ENSMMSG00000018866) #16	CD93 (ENSMMSG00000018871) #17	THBD (ENSMMSG00000018897) #18	FOXA2 (ENSMMSG00000018910) #20	PAX1 (ENSMMSG00000018943) #21	NKX2-2 (ENSMMSG00000018973) #22	ENSMMSG00000018994	ENSMMSG00000019016	NKX2-4 (ENSMMSG00000019032) #23	XRN2 (ENSMMSG00000019064) #24	KIZ (ENSMMSG00000019151) #25	RALGAPA2 (ENSMMSG00000019313) #26	INSM1 (ENSMMSG00000019511) #27	ENSMMSG00000019522	ENSMMSG00000019535 #28	ENSMMSG00000019564 #28	CRNKL1 (ENSMMSG00000019594) #31	NAA20 (ENSMMSG00000019613) #32	RIN2 (ENSMMSG00000019665) #33	SLC24A3 (ENSMMSG00000019736) #34	SCP2D1 (ENSMMSG00000019818) #35
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000161877.j #10	ENSGT00940000161877.i ##10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Caprinae	ANCESTRAL SPECIES	23	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00950000183014.f.a.h.u.a.a.b.a	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155114.wb.b	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT00390000001138.a.g	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00860000134050 #37	ENSGT00940000153431.b.b #36	ENSGT00390000006916.c
Rambouillet Sheep	MODERN SPECIES	4	ENSOARG00020005253 #11	ENSOARG00020005233	ENSOARG00020005223	ENSOARG00020005206	ENSOARG00020005178 #12	CSTL1 (ENSOARG00020005157) #13	NAPB (ENSOARG00020004860) #14	GZF1 (ENSOARG00020004766) #15	NXT1 (ENSOARG00020004744) #16	ENSOARG00020004719	CD93 (ENSOARG00020004706) #17	ENSOARG00020004667	FOXA2 (ENSOARG00020004643) #20	ENSOARG00020004631	PAX1 (ENSOARG00020004579) #21	NKX2-2 (ENSOARG00020004554) #22	NKX2-4 (ENSOARG00020004533) #23	XRN2 (ENSOARG00020004498) #24	KIZ (ENSOARG00020004321) #25	RALGAPA2 (ENSOARG00020003837) #26	INSM1 (ENSOARG00020003800) #27	CFAP61 (ENSOARG00020003632) #28	CRNKL1 (ENSOARG00020003543) #31	NAA20 (ENSOARG00020003499) #32	RIN2 (ENSOARG00020003240) #33	ENSOARG00020023127	SLC24A3 (ENSOARG00020023051) #34	SCP2D1 (ENSOARG00020023032) #35	ENSOARG00020023011 #36	SMIM26 (ENSOARG00020022969) #37	SEC23B (ENSOARG00020022920)
Goat	MODERN SPECIES	4	ENSCHIG00000022173 #10	ENSCHIG00000009930 ##10	ENSCHIG00000021829 #11	ENSCHIG00000025947	ENSCHIG00000017766	ENSCHIG00000003642	ENSCHIG00000021813 #12	NAPB (ENSCHIG00000020249) #14	GZF1 (ENSCHIG00000008882) #15	ENSCHIG00000021979	CD93 (ENSCHIG00000009092) #17	THBD (ENSCHIG00000010975) #18	ENSCHIG00000022438	FOXA2 (ENSCHIG00000013879) #20	PAX1 (ENSCHIG00000025250) #21	NKX2-2 (ENSCHIG00000025252) #22	NKX2-4 (ENSCHIG00000017092) #23	ENSCHIG00000009213	XRN2 (ENSCHIG00000006921) #24	KIZ (ENSCHIG00000020496) #25	ENSCHIG00000001410	ENSCHIG00000005268	RALGAPA2 (ENSCHIG00000023081) #26	INSM1 (ENSCHIG00000002944) #27	CFAP61 (ENSCHIG00000022048) #28	CRNKL1 (ENSCHIG00000013171) #31	NAA20 (ENSCHIG00000021922) #32	RIN2 (ENSCHIG00000009997) #33	ENSCHIG00000020114	ENSCHIG00000008840	SLC24A3 (ENSCHIG00000010684) #34
Bovinae	ANCESTRAL SPECIES	20	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000153362.a.cb.b.a.a	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT00390000001138.a.g.b	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c
Bos	ANCESTRAL SPECIES	22	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554.jb #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137.d #21	ENSGT00940000153362.a.cb.b.a.a	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B.d #33	ENSGT00390000001138.a.g.b	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554.jb #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137.d #21	ENSGT00940000153362.a.bb.b.a	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B.d #33	ENSGT00390000001138.a.g.b	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00950000183210.d.a.c.a.a.b.f.a.b	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Cow	MODERN SPECIES	4	SYNDIG1 (ENSBTAG00000040147) #8	CST3 (ENSBTAG00000000598) #9	ENSBTAG00000032687 #10	ENSBTAG00000015949 #11	CST8 (ENSBTAG00000032694)	MGC133636 (ENSBTAG00000013416)	ENSBTAG00000027420	NAPB (ENSBTAG00000032704) #14	GZF1 (ENSBTAG00000008908) #15	NXT1 (ENSBTAG00000004993) #16	CD93 (ENSBTAG00000004207) #17	THBD (ENSBTAG00000048591) #18	FOXA2 (ENSBTAG00000012407) #20	PAX1 (ENSBTAG00000006742) #21	ENSBTAG00000035643	NKX2-2 (ENSBTAG00000010277) #22	NKX2-4 (ENSBTAG00000011312) #23	XRN2 (ENSBTAG00000011304) #24	KIZ (ENSBTAG00000020988) #25	RALGAPA2 (ENSBTAG00000014178) #26	CFAP61 (ENSBTAG00000009291) #28	CRNKL1 (ENSBTAG00000008472) #31	NAA20 (ENSBTAG00000001144) #32	RIN2 (ENSBTAG00000020382) #33	ENSBTAG00000032893	SLC24A3 (ENSBTAG00000011882) #34	SCP2D1 (ENSBTAG00000005202) #35	ENSBTAG00000012276	DTD1 (ENSBTAG00000008964) #36	SMIM26 (ENSBTAG00000051249) #37	SEC23B (ENSBTAG00000018295)
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000161877.j #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554.jb #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137.d #21	ENSGT00940000153362.a.cb.b.a.a	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B.d #33	ENSGT00960000190537	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00950000183210.d.a.c.a.a.b.f.a.b	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Wild yak	MODERN SPECIES	194											CD93 (ENSBMUG00000003082) #17	ENSBMUG00000003102 #18	FOXA2 (ENSBMUG00000003127) #20	PAX1 (ENSBMUG00000003140) #21	ENSBMUG00000003171	NKX2-2 (ENSBMUG00000003181) #22	XRN2 (ENSBMUG00000003295) #24	KIZ (ENSBMUG00000003411) #25	RALGAPA2 (ENSBMUG00000003599) #26	CFAP61 (ENSBMUG00000003762) #28	CRNKL1 (ENSBMUG00000003809) #31	NAA20 (ENSBMUG00000003835) #32	RIN2 (ENSBMUG00000003883) #33	ENSBMUG00000003910	SLC24A3 (ENSBMUG00000003930) #34	SCP2D1 (ENSBMUG00000003945) #35	ENSBMUG00000003967	DTD1 (ENSBMUG00000004000) #36	SMIM26 (ENSBMUG00000004015) #37	SEC23B (ENSBMUG00000004165)	RBBP9 (ENSBMUG00000004226)
Domestic yak	MODERN SPECIES	3	ENSBGRG00000007655	ENSBGRG00000007612	ENSBGRG00000007520 #12	CSTL1 (ENSBGRG00000007456) #13	NAPB (ENSBGRG00000007201) #14	ENSBGRG00000007150 #15	ENSBGRG00000007097 #15	NXT1 (ENSBGRG00000007076) #16	ENSBGRG00000007043	CD93 (ENSBGRG00000006986) #17	THBD (ENSBGRG00000006963) #18	FOXA2 (ENSBGRG00000006927) #20	PAX1 (ENSBGRG00000006855) #21	ENSBGRG00000006824 #21	ENSBGRG00000006808	NKX2-2 (ENSBGRG00000006790) #22	NKX2-4 (ENSBGRG00000006760) #23	XRN2 (ENSBGRG00000006633) #24	KIZ (ENSBGRG00000006486) #25	ENSBGRG00000006333 #26	ENSBGRG00000006247 #26	INSM1 (ENSBGRG00000006219) #27	CFAP61 (ENSBGRG00000006111) #28	CRNKL1 (ENSBGRG00000006006) #31	NAA20 (ENSBGRG00000005893) #32	ENSBGRG00000005870 #33	ENSBGRG00000005832 #33	SLC24A3 (ENSBGRG00000005785) #34	ENSBGRG00000005768	DTD1 (ENSBGRG00000005731) #36	SMIM26 (ENSBGRG00000005700) #37
American bison	MODERN SPECIES	2997	CST3 (ENSBBBG00000005938) #9	ENSBBBG00000022502 #10	ENSBBBG00000022506 #11	CST8 (ENSBBBG00000022516)	ENSBBBG00000005942	ENSBBBG00000022528	ENSBBBG00000022535 #12	CSTL1 (ENSBBBG00000022543) #13	NAPB (ENSBBBG00000022632) #14	GZF1 (ENSBBBG00000022655) #15	CD93 (ENSBBBG00000005967) #17	THBD (ENSBBBG00000022684) #18	FOXA2 (ENSBBBG00000022700) #20	PAX1 (ENSBBBG00000022763) #21	ENSBBBG00000022780	ENSBBBG00000022786 #22	XRN2 (ENSBBBG00000022814) #24	KIZ (ENSBBBG00000022908) #25	RALGAPA2 (ENSBBBG00000022984) #26	ENSBBBG00000022996 #27	CFAP61 (ENSBBBG00000006046) #28	CRNKL1 (ENSBBBG00000008793) #31	NAA20 (ENSBBBG00000023097) #32	RIN2 (ENSBBBG00000023140) #33	ENSBBBG00000023147	SLC24A3 (ENSBBBG00000000461) #34	SCP2D1 (ENSBBBG00000000425) #35	DTD1 (ENSBBBG00000000410) #36	SMIM26 (ENSBBBG00000000399) #37	SEC23B (ENSBBBG00000023236)	RBBP9 (ENSBBBG00000006080)
Camelidae	ANCESTRAL SPECIES	49	ENSGT00940000154755 #9	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000166261	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861	ENSGT00390000009679	ENSGT00390000000549
Arabian camel	MODERN SPECIES	10	ENSCDRG00005019533 #10	ENSCDRG00005019539 #10	ENSCDRG00005019553 #11	CST8 (ENSCDRG00005019565)	ENSCDRG00005019579	ENSCDRG00005019599	ENSCDRG00005019617 #12	CSTL1 (ENSCDRG00005019624) #13	ENSCDRG00005019640 #14	GZF1 (ENSCDRG00005019674) #15	ENSCDRG00005019685 #16	CD93 (ENSCDRG00005019688) #17	ENSCDRG00005019694	FOXA2 (ENSCDRG00005019700) #20	PAX1 (ENSCDRG00005019717) #21	NKX2-2 (ENSCDRG00005019726) #22	XRN2 (ENSCDRG00005019738) #24	KIZ (ENSCDRG00005019794) #25	ENSCDRG00005020052 #26	ENSCDRG00005020129 #26	CFAP61 (ENSCDRG00005020211) #28	CRNKL1 (ENSCDRG00005020237) #31	NAA20 (ENSCDRG00005020249) #32	RIN2 (ENSCDRG00005020269) #33	SLC24A3 (ENSCDRG00005020283) #34	SCP2D1 (ENSCDRG00005020314) #35	DTD1 (ENSCDRG00005003474) #36	SMIM26 (ENSCDRG00005003504) #37	SEC23B (ENSCDRG00005003558)	RBBP9 (ENSCDRG00005003649)	POLR3F (ENSCDRG00005003691)
Suina	ANCESTRAL SPECIES	9	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Pig	MODERN SPECIES	8	SYNDIG1 (ENSSSCG00000007130) #8	CST3 (ENSSSCG00000037360) #9	CST9L (ENSSSCG00000029289) #10	ENSSSCG00000007125 #11	ENSSSCG00000007124	ENSSSCG00000007123	CST11 (ENSSSCG00000007122) #12	CSTL1 (ENSSSCG00000007121) #13	NAPB (ENSSSCG00000031219) #14	GZF1 (ENSSSCG00000007117) #15	NXT1 (ENSSSCG00000007119) #16	CD93 (ENSSSCG00000007116) #17	THBD (ENSSSCG00000053422) #18	FOXA2 (ENSSSCG00000007114) #20	PAX1 (ENSSSCG00000007112) #21	NKX2-2 (ENSSSCG00000040017) #22	NKX2-4 (ENSSSCG00000007110) #23	XRN2 (ENSSSCG00000007109) #24	KIZ (ENSSSCG00000007108) #25	ENSSSCG00000048962	RALGAPA2 (ENSSSCG00000026506) #26	INSM1 (ENSSSCG00000062159) #27	CFAP61 (ENSSSCG00000038858) #28	CRNKL1 (ENSSSCG00000038587) #31	NAA20 (ENSSSCG00000028132) #32	ENSSSCG00000028004 #33	SLC24A3 (ENSSSCG00000007100) #34	SCP2D1 (ENSSSCG00000007099) #35	DTD1 (ENSSSCG00000007098) #36	SMIM26 (ENSSSCG00000025589) #37	SEC23B (ENSSSCG00000007097)
Chacoan peccary	MODERN SPECIES	801	SYNDIG1 (ENSCWAG00000016959) #8	CST3 (ENSCWAG00000016979) #9	ENSCWAG00000017004 #10	ENSCWAG00000017060 #11	CST8 (ENSCWAG00000017086)	ENSCWAG00000017127	CST11 (ENSCWAG00000017158) #12	CSTL1 (ENSCWAG00000017189) #13	NAPB (ENSCWAG00000017225) #14	GZF1 (ENSCWAG00000017910) #15	NXT1 (ENSCWAG00000017956) #16	CD93 (ENSCWAG00000017965) #17	THBD (ENSCWAG00000017996) #18	FOXA2 (ENSCWAG00000007985) #20	PAX1 (ENSCWAG00000008052) #21	NKX2-2 (ENSCWAG00000008122) #22	NKX2-4 (ENSCWAG00000008162) #23	XRN2 (ENSCWAG00000008201) #24	KIZ (ENSCWAG00000008351) #25	RALGAPA2 (ENSCWAG00000008863) #26	INSM1 (ENSCWAG00000009223) #27	CFAP61 (ENSCWAG00000009261) #28	CRNKL1 (ENSCWAG00000009575) #31	NAA20 (ENSCWAG00000009645) #32	ENSCWAG00000009830 #33	SLC24A3 (ENSCWAG00000009885) #34	SCP2D1 (ENSCWAG00000010002) #35	DTD1 (ENSCWAG00000010021) #36	SMIM26 (ENSCWAG00000010058) #37	SEC23B (ENSCWAG00000010080)	RBBP9 (ENSCWAG00000010152)
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Equus	ANCESTRAL SPECIES	8	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00510000047812.l	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00390000006916.c	ENSGT00390000014861
Horse	MODERN SPECIES	14	SYNDIG1 (ENSECAG00000006421) #8	CST3 (ENSECAG00000038893) #9	ENSECAG00000045045 #11	CST9L (ENSECAG00000010654) #10	CST8 (ENSECAG00000029932)	ENSECAG00000014988	CST11 (ENSECAG00000016342) #12	CSTL1 (ENSECAG00000019672) #13	NAPB (ENSECAG00000022016) #14	GZF1 (ENSECAG00000011343) #15	NXT1 (ENSECAG00000035032) #16	CD93 (ENSECAG00000016324) #17	THBD (ENSECAG00000005241) #18	FOXA2 (ENSECAG00000032004) #20	PAX1 (ENSECAG00000016945) #21	NKX2-2 (ENSECAG00000018977) #22	NKX2-4 (ENSECAG00000037105) #23	XRN2 (ENSECAG00000018988) #24	KIZ (ENSECAG00000016626) #25	ENSECAG00000036437	RALGAPA2 (ENSECAG00000019950) #26	INSM1 (ENSECAG00000037552) #27	CFAP61 (ENSECAG00000004364) #28	CRNKL1 (ENSECAG00000022215) #31	NAA20 (ENSECAG00000012609) #32	RIN2 (ENSECAG00000015381) #33	SLC24A3 (ENSECAG00000019334) #34	DTD1 (ENSECAG00000025075) #36	SEC23B (ENSECAG00000025087)	RBBP9 (ENSECAG00000001333)	POLR3F (ENSECAG00000009920)
Donkey	MODERN SPECIES	6	ENSEASG00005002598 #9	ENSEASG00005027176 #10	ENSEASG00005025391 #11	CST8 (ENSEASG00005030555)	ENSEASG00005031840	CST11 (ENSEASG00005002576) #12	CSTL1 (ENSEASG00005002572) #13	NAPB (ENSEASG00005002564) #14	GZF1 (ENSEASG00005002557) #15	NXT1 (ENSEASG00005033641) #16	CD93 (ENSEASG00005002547) #17	THBD (ENSEASG00005027531) #18	SSTR4 (ENSEASG00005002540) #19	FOXA2 (ENSEASG00005002535) #20	PAX1 (ENSEASG00005002521) #21	NKX2-2 (ENSEASG00005038540) #22	NKX2-4 (ENSEASG00005002501) #23	XRN2 (ENSEASG00005002484) #24	KIZ (ENSEASG00005002467) #25	ENSEASG00005002454	RALGAPA2 (ENSEASG00005002224) #26	INSM1 (ENSEASG00005002118) #27	CFAP61 (ENSEASG00005002079) #28	CRNKL1 (ENSEASG00005002072) #31	NAA20 (ENSEASG00005002069) #32	RIN2 (ENSEASG00005002067) #33	SLC24A3 (ENSEASG00005002055) #34	SCP2D1 (ENSEASG00005037273) #35	DTD1 (ENSEASG00005002041) #36	SEC23B (ENSEASG00005002036)	RBBP9 (ENSEASG00005023627)
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00950000183147.B #8	ENSGT00940000154755 #9	ENSGT00940000161877 #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Microbat	MODERN SPECIES	1142															PAX1 (ENSMLUG00000014710) #21	NKX2-2 (ENSMLUG00000009371) #22	XRN2 (ENSMLUG00000001536) #24	KIZ (ENSMLUG00000001531) #25	RALGAPA2 (ENSMLUG00000016548) #26	CFAP61 (ENSMLUG00000016527) #28	CRNKL1 (ENSMLUG00000016513) #31	NAA20 (ENSMLUG00000016508) #32	RIN2 (ENSMLUG00000016498) #33	SLC24A3 (ENSMLUG00000005788) #34
Greater horseshoe bat	MODERN SPECIES	15	CST9L (ENSRFEG00010011055) #10	ENSRFEG00010011001 #11	ENSRFEG00010010952	CST11 (ENSRFEG00010010901) #12	CSTL1 (ENSRFEG00010010843) #13	NAPB (ENSRFEG00010010719) #14	GZF1 (ENSRFEG00010010618) #15	NXT1 (ENSRFEG00010010600) #16	CD93 (ENSRFEG00010010553) #17	THBD (ENSRFEG00010010533) #18	ENSRFEG00010010499	ENSRFEG00010010431	FOXA2 (ENSRFEG00010010354) #20	ENSRFEG00010010271	PAX1 (ENSRFEG00010010205) #21	NKX2-2 (ENSRFEG00010010185) #22	NKX2-4 (ENSRFEG00010010146) #23	XRN2 (ENSRFEG00010010058) #24	ENSRFEG00010010021	KIZ (ENSRFEG00010009832) #25	ENSRFEG00010009788	RALGAPA2 (ENSRFEG00010009655) #26	INSM1 (ENSRFEG00010009617) #27	CFAP61 (ENSRFEG00010009533) #28	CRNKL1 (ENSRFEG00010009485) #31	NAA20 (ENSRFEG00010009410) #32	RIN2 (ENSRFEG00010009330) #33	ENSRFEG00010009294	SLC24A3 (ENSRFEG00010009266) #34	ENSRFEG00010009202	DTD1 (ENSRFEG00010009168) #36
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000161877.n #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000163249 #11	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000163249 #11	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Tiger	MODERN SPECIES	535	ENSPTIG00000007645	ENSPTIG00000007325	CST9L (ENSPTIG00000007266) #10	ENSPTIG00000007155 #11	CST8 (ENSPTIG00000006377)	ENSPTIG00000005641	ENSPTIG00000005550	CST11 (ENSPTIG00000003091) #12	ENSPTIG00000001355	NAPB (ENSPTIG00000019947) #14	GZF1 (ENSPTIG00000019328) #15	NXT1 (ENSPTIG00000003788) #16	CD93 (ENSPTIG00000018580) #17	SSTR4 (ENSPTIG00000003769) #19	PAX1 (ENSPTIG00000017141) #21	NKX2-2 (ENSPTIG00000016807) #22	XRN2 (ENSPTIG00000015683) #24	KIZ (ENSPTIG00000015123) #25	RALGAPA2 (ENSPTIG00000012682) #26	CFAP61 (ENSPTIG00000009217) #28	CRNKL1 (ENSPTIG00000007393) #31	NAA20 (ENSPTIG00000006328) #32	RIN2 (ENSPTIG00000003100) #33	SLC24A3 (ENSPTIG00000021465) #34	SCP2D1 (ENSPTIG00000002789) #35	DTD1 (ENSPTIG00000020971) #36	SEC23B (ENSPTIG00000020593)	RBBP9 (ENSPTIG00000020464)	POLR3F (ENSPTIG00000020292)	DZANK1 (ENSPTIG00000017259)	ZNF133 (ENSPTIG00000016359)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000163249 #11	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046.k #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
leopard	MODERN SPECIES	39	ENSPPRG00000015946 #11	ENSPPRG00000015501	CST8 (ENSPPRG00000015009)	ENSPPRG00000014635	ENSPPRG00000013202	CST11 (ENSPPRG00000011764) #12	ENSPPRG00000011394	NAPB (ENSPPRG00000010805) #14	GZF1 (ENSPPRG00000010040) #15	NXT1 (ENSPPRG00000021392) #16	CD93 (ENSPPRG00000009570) #17	THBD (ENSPPRG00000021378) #18	SSTR4 (ENSPPRG00000021367) #19	FOXA2 (ENSPPRG00000009206) #20	PAX1 (ENSPPRG00000009070) #21	NKX2-2 (ENSPPRG00000008916) #22	NKX2-4 (ENSPPRG00000008761) #23	XRN2 (ENSPPRG00000008732) #24	KIZ (ENSPPRG00000007745) #25	RALGAPA2 (ENSPPRG00000006401) #26	INSM1 (ENSPPRG00000021271) #27	CFAP61 (ENSPPRG00000004321) #28	CRNKL1 (ENSPPRG00000001955) #31	ENSPPRG00000001197 #32	ENSPPRG00000000577 #33	SLC24A3 (ENSPPRG00000022720) #34	SCP2D1 (ENSPPRG00000021046) #35	DTD1 (ENSPPRG00000023943) #36	SEC23B (ENSPPRG00000024318)	RBBP9 (ENSPPRG00000024506)	POLR3F (ENSPPRG00000024604)
lion	MODERN SPECIES	3	CST9L (ENSPLOG00000000670) #10	ENSPLOG00000000686 #11	CST8 (ENSPLOG00000000695)	ENSPLOG00000000715	ENSPLOG00000000735	CST11 (ENSPLOG00000000758) #12	CSTL1 (ENSPLOG00000000776) #13	NAPB (ENSPLOG00000000809) #14	GZF1 (ENSPLOG00000000839) #15	NXT1 (ENSPLOG00000000844) #16	CD93 (ENSPLOG00000000855) #17	THBD (ENSPLOG00000000869) #18	SSTR4 (ENSPLOG00000000946) #19	FOXA2 (ENSPLOG00000000959) #20	PAX1 (ENSPLOG00000000971) #21	NKX2-2 (ENSPLOG00000000985) #22	NKX2-4 (ENSPLOG00000001002) #23	XRN2 (ENSPLOG00000001042) #24	KIZ (ENSPLOG00000001155) #25	RALGAPA2 (ENSPLOG00000001266) #26	INSM1 (ENSPLOG00000001312) #27	CFAP61 (ENSPLOG00000001356) #28	CRNKL1 (ENSPLOG00000001416) #31	NAA20 (ENSPLOG00000001447) #32	RIN2 (ENSPLOG00000001490) #33	SLC24A3 (ENSPLOG00000001538) #34	DTD1 (ENSPLOG00000001574) #36	SMIM26 (ENSPLOG00000001583) #37	SEC23B (ENSPLOG00000001608)	RBBP9 (ENSPLOG00000001658)	POLR3F (ENSPLOG00000001687)
Cat	MODERN SPECIES	2	ENSFCAG00000027887 #11	ENSFCAG00000023071	CST8 (ENSFCAG00000023255)	ENSFCAG00000042989	ENSFCAG00000026179	CST11 (ENSFCAG00000003949) #12	CSTL1 (ENSFCAG00000041684) #13	NAPB (ENSFCAG00000037279) #14	GZF1 (ENSFCAG00000006484) #15	NXT1 (ENSFCAG00000006482) #16	CD93 (ENSFCAG00000025238) #17	THBD (ENSFCAG00000011513) #18	SSTR4 (ENSFCAG00000022777) #19	FOXA2 (ENSFCAG00000012368) #20	PAX1 (ENSFCAG00000004293) #21	NKX2-2 (ENSFCAG00000008740) #22	NKX2-4 (ENSFCAG00000045261) #23	XRN2 (ENSFCAG00000007970) #24	KIZ (ENSFCAG00000007966) #25	RALGAPA2 (ENSFCAG00000028385) #26	INSM1 (ENSFCAG00000040680) #27	CFAP61 (ENSFCAG00000000715) #28	CRNKL1 (ENSFCAG00000000714) #31	NAA20 (ENSFCAG00000028113) #32	RIN2 (ENSFCAG00000014527) #33	SLC24A3 (ENSFCAG00000008015) #34	SCP2D1 (ENSFCAG00000003254) #35	ENSFCAG00000051916	DTD1 (ENSFCAG00000013835) #36	SMIM26 (ENSFCAG00000048664) #37	SEC23B (ENSFCAG00000013833)
Caniformia	ANCESTRAL SPECIES		ENSGT00940000161877.m #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Canidae	ANCESTRAL SPECIES	19			ENSGT00940000157363.b	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046.j.a #32	ENSGT00940000161804.d.a	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Red fox	MODERN SPECIES	40				ENSVVUG00000012055	ENSVVUG00000012058 #11	ENSVVUG00000012060	ENSVVUG00000012064	ENSVVUG00000012067	CST11 (ENSVVUG00000012069) #12	CSTL1 (ENSVVUG00000012073) #13	NAPB (ENSVVUG00000012075) #14	GZF1 (ENSVVUG00000012086) #15	NXT1 (ENSVVUG00000012091) #16	ENSVVUG00000012111	PAX1 (ENSVVUG00000012146) #21	NKX2-2 (ENSVVUG00000012163) #22	ENSVVUG00000012172 #23	XRN2 (ENSVVUG00000012178) #24	KIZ (ENSVVUG00000012190) #25	RALGAPA2 (ENSVVUG00000012242) #26	ENSVVUG00000012364	CFAP61 (ENSVVUG00000012388) #28	ENSVVUG00000012539	CRNKL1 (ENSVVUG00000012559) #31	NAA20 (ENSVVUG00000012582) #32	ENSVVUG00000012599	RIN2 (ENSVVUG00000012604) #33	SLC24A3 (ENSVVUG00000012656) #34	ENSVVUG00000012858 #35	DTD1 (ENSVVUG00000012861) #36	SMIM26 (ENSVVUG00000012870) #37
Canis_lupus	ANCESTRAL SPECIES	13		ENSGT00940000157363.b	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT01100000263605.j	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046.j.a #32	ENSGT00940000161804.d.a	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861
Dingo	MODERN SPECIES	343	ENSCAFG00020027456 #11	CST8 (ENSCAFG00020027457)	ENSCAFG00020027458	CST11 (ENSCAFG00020027459) #12	CSTL1 (ENSCAFG00020027460) #13	ENSCAFG00020027461 #14	ENSCAFG00020027463 #15	ENSCAFG00020027464 #15	ENSCAFG00020027465 #16	CD93 (ENSCAFG00020027467) #17	THBD (ENSCAFG00020027468) #18	ENSCAFG00020027470	ENSCAFG00020027471	FOXA2 (ENSCAFG00020027472) #20	PAX1 (ENSCAFG00020027475) #21	NKX2-2 (ENSCAFG00020027477) #22	NKX2-4 (ENSCAFG00020027478) #23	XRN2 (ENSCAFG00020027479) #24	KIZ (ENSCAFG00020027480) #25	RALGAPA2 (ENSCAFG00020027484) #26	CFAP61 (ENSCAFG00020027486) #28	ENSCAFG00020027487	CRNKL1 (ENSCAFG00020027488) #31	ENSCAFG00020027489 #32	ENSCAFG00020027490	RIN2 (ENSCAFG00020027491) #33	SLC24A3 (ENSCAFG00020027492) #34	SCP2D1 (ENSCAFG00020027495) #35	DTD1 (ENSCAFG00020027496) #36	SMIM26 (ENSCAFG00020027497) #37	SEC23B (ENSCAFG00020027498)
Dog	MODERN SPECIES	16	HUS1 (ENSCAFG00845026030)	ENSCAFG00845026576	ENSCAFG00845026609 #11	CST8 (ENSCAFG00845026649)	ENSCAFG00845026671	CST11 (ENSCAFG00845026760) #12	CSTL1 (ENSCAFG00845026794) #13	NAPB (ENSCAFG00845026852) #14	GZF1 (ENSCAFG00845027001) #15	CD93 (ENSCAFG00845027134) #17	THBD (ENSCAFG00845027195) #18	ENSCAFG00845027219	ENSCAFG00845027242	FOXA2 (ENSCAFG00845027259) #20	PAX1 (ENSCAFG00845027290) #21	NKX2-2 (ENSCAFG00845027437) #22	NKX2-4 (ENSCAFG00845027483) #23	XRN2 (ENSCAFG00845027569) #24	KIZ (ENSCAFG00845028046) #25	RALGAPA2 (ENSCAFG00845028444) #26	CFAP61 (ENSCAFG00845028852) #28	ENSCAFG00845028933	CRNKL1 (ENSCAFG00845028961) #31	NAA20 (ENSCAFG00845029048) #32	ENSCAFG00845029111	RIN2 (ENSCAFG00845029255) #33	SLC24A3 (ENSCAFG00845029352) #34	SCP2D1 (ENSCAFG00845029392) #35	ENSCAFG00845029447 #36	ENSCAFG00845029520 #37	SEC23B (ENSCAFG00845029542)
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000161877.m.b #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
Mustelinae	ANCESTRAL SPECIES	43	ENSGT00940000161877.m.a #10	ENSGT00940000161877.n #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00940000162552 #27	ENSGT00940000167996	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT01000000221541	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37
American mink	MODERN SPECIES	460															PAX1 (ENSNVIG00000024342) #21	NKX2-2 (ENSNVIG00000024347) #22	NKX2-4 (ENSNVIG00000024348) #23	XRN2 (ENSNVIG00000024349) #24	KIZ (ENSNVIG00000024357) #25
Ferret	MODERN SPECIES	204	ENSMPUG00000001137 #10	ENSMPUG00000001138 #10	ENSMPUG00000001140	CST8 (ENSMPUG00000001143)	ENSMPUG00000001151	CST11 (ENSMPUG00000001154) #12	NAPB (ENSMPUG00000001158) #14	GZF1 (ENSMPUG00000001160) #15	NXT1 (ENSMPUG00000019260) #16	CD93 (ENSMPUG00000001163) #17	THBD (ENSMPUG00000019265) #18	SSTR4 (ENSMPUG00000019271) #19	FOXA2 (ENSMPUG00000001166) #20	ENSMPUG00000001167	PAX1 (ENSMPUG00000001187) #21	NKX2-2 (ENSMPUG00000001196) #22	XRN2 (ENSMPUG00000001198) #24	KIZ (ENSMPUG00000001201) #25	ENSMPUG00000019274	ENSMPUG00000001204	RALGAPA2 (ENSMPUG00000001210) #26	INSM1 (ENSMPUG00000001216) #27	CFAP61 (ENSMPUG00000001219) #28	CRNKL1 (ENSMPUG00000001226) #31	NAA20 (ENSMPUG00000001228) #32	RIN2 (ENSMPUG00000001230) #33	ENSMPUG00000001233	SLC24A3 (ENSMPUG00000001234) #34	ENSMPUG00000001236	SCP2D1 (ENSMPUG00000019276) #35	DTD1 (ENSMPUG00000001238) #36
Ursidae	ANCESTRAL SPECIES	14	ENSGT00940000161877.m.b #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000155999 #20	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25	ENSGT00950000183139.A #26	ENSGT00390000004987 #28	ENSGT00550000074931 #31	ENSGT00550000075046 #32	ENSGT00940000154866.B #33	ENSGT01030000234532.A.a.a.b #34	ENSGT00940000154327.b.e.b #35	ENSGT00940000153431.b #36	ENSGT00860000134050 #37	ENSGT00390000006916.c	ENSGT00390000014861	ENSGT00390000009679
Giant Panda	MODERN SPECIES	4	ENSAMEG00000009914 #11	CST8 (ENSAMEG00000009906)	ENSAMEG00000009904	CST11 (ENSAMEG00000009897) #12	CSTL1 (ENSAMEG00000026681) #13	NAPB (ENSAMEG00000009863) #14	GZF1 (ENSAMEG00000009853) #15	NXT1 (ENSAMEG00000018729) #16	ENSAMEG00000024065	CD93 (ENSAMEG00000009849) #17	THBD (ENSAMEG00000019083) #18	SSTR4 (ENSAMEG00000019048) #19	FOXA2 (ENSAMEG00000015802) #20	ENSAMEG00000031412	PAX1 (ENSAMEG00000012642) #21	NKX2-2 (ENSAMEG00000029802) #22	NKX2-4 (ENSAMEG00000030670) #23	XRN2 (ENSAMEG00000012581) #24	KIZ (ENSAMEG00000012566) #25	RALGAPA2 (ENSAMEG00000000299) #26	CFAP61 (ENSAMEG00000000288) #28	CRNKL1 (ENSAMEG00000000270) #31	NAA20 (ENSAMEG00000000262) #32	RIN2 (ENSAMEG00000000240) #33	SLC24A3 (ENSAMEG00000000234) #34	SCP2D1 (ENSAMEG00000018743) #35	DTD1 (ENSAMEG00000005878) #36	SMIM26 (ENSAMEG00000025598) #37	SEC23B (ENSAMEG00000005865)	RBBP9 (ENSAMEG00000005238)	POLR3F (ENSAMEG00000005222)
Ursus	ANCESTRAL SPECIES	191	ENSGT00940000161877.n #10	ENSGT00940000161877.m.b #10	ENSGT00940000163249 #11	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356 #12	ENSGT00900000141212 #13	ENSGT00390000005826.a.b #14	ENSGT00870000136554 #15	ENSGT00940000162041 #16	ENSGT00940000156996 #17	ENSGT00940000163276 #18	ENSGT00940000156819.a.a #19	ENSGT00940000159137 #21	ENSGT00940000159727 #22	ENSGT00940000162247 #23	ENSGT00670000098098 #24	ENSGT00390000010121 #25
Polar bear	MODERN SPECIES	300	ENSUMAG00000004190 #10	ENSUMAG00000004185 #10	ENSUMAG00000004168 #10	ENSUMAG00000004162 #11	CST8 (ENSUMAG00000004155)	ENSUMAG00000004147	ENSUMAG00000004140	CST11 (ENSUMAG00000004135) #12	CSTL1 (ENSUMAG00000004128) #13	NAPB (ENSUMAG00000004081) #14	GZF1 (ENSUMAG00000004065) #15	NXT1 (ENSUMAG00000004062) #16	CD93 (ENSUMAG00000004052) #17	SSTR4 (ENSUMAG00000004048) #19	PAX1 (ENSUMAG00000004035) #21	ENSUMAG00000004026 #22	XRN2 (ENSUMAG00000004012) #24	KIZ (ENSUMAG00000003912) #25	ENSUMAG00000003879 #26
American black bear	MODERN SPECIES	956																NKX2-2 (ENSUAMG00000024865) #22	ENSUAMG00000024864 #23	XRN2 (ENSUAMG00000024634) #24	KIZ (ENSUAMG00000024603) #25
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159727 #22
Hedgehog	MODERN SPECIES	2505																NKX2-2 (ENSEEUG00000000616) #22