Amniota	ANCESTRAL SPECIES	40	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Mammalia	ANCESTRAL SPECIES	46	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.j.a	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Theria	ANCESTRAL SPECIES	46	ENSGT00390000002034 #7	ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.j.a	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Eutheria	ANCESTRAL SPECIES	16	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Primates	ANCESTRAL SPECIES	23	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Strepsirrhini	ANCESTRAL SPECIES	45	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Bushbaby	MODERN SPECIES	364	EMD (ENSOGAG00000029264) #7	FLNA (ENSOGAG00000015265) #8	ENSOGAG00000017264 #9	ENSOGAG00000027452 #10	TKTL1 (ENSOGAG00000000901) #11	TEX28 (ENSOGAG00000000900) #12	ENSOGAG00000000897 #13	MECP2 (ENSOGAG00000015115) #14	IRAK1 (ENSOGAG00000015108) #15	TMEM187 (ENSOGAG00000026922) #16	HCFC1 (ENSOGAG00000015100) #17	RENBP (ENSOGAG00000032778) #18	NAA10 (ENSOGAG00000013263) #19	ARHGAP4 (ENSOGAG00000015087) #20	AVPR2 (ENSOGAG00000030887) #21	L1CAM (ENSOGAG00000015077) #22	PDZD4 (ENSOGAG00000006741) #23	SSR4 (ENSOGAG00000006738) #24	ENSOGAG00000006735 #25	SRPK3 (ENSOGAG00000003138) #26	PLXNB3 (ENSOGAG00000003133) #27	ABCD1 (ENSOGAG00000027153) #28	BCAP31 (ENSOGAG00000006721) #29	ENSOGAG00000031270 #30	PNCK (ENSOGAG00000006718) #31	DUSP9 (ENSOGAG00000002412) #32	ENSOGAG00000033279 #33	ATP2B3 (ENSOGAG00000008921) #34	BGN (ENSOGAG00000008920) #35	ENSOGAG00000029324 #36	HAUS7 (ENSOGAG00000008917) #37
Lemuriformes	ANCESTRAL SPECIES	60	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Lemuriformes_a	ANCESTRAL SPECIES	110	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Coquerels sifaka	MODERN SPECIES	882	TAFAZZIN (ENSPCOG00000023186)	DNASE1L1 (ENSPCOG00000022635)	ENSPCOG00000027122	EMD (ENSPCOG00000015697) #7	FLNA (ENSPCOG00000011059) #8	TKTL1 (ENSPCOG00000023105) #11	ENSPCOG00000015866 #13	MECP2 (ENSPCOG00000024848) #14	IRAK1 (ENSPCOG00000027349) #15	TMEM187 (ENSPCOG00000024026) #16	HCFC1 (ENSPCOG00000028065) #17	RENBP (ENSPCOG00000013414) #18	ENSPCOG00000027024 #19	ARHGAP4 (ENSPCOG00000009927) #20	AVPR2 (ENSPCOG00000008409) #21	L1CAM (ENSPCOG00000010437) #22	PDZD4 (ENSPCOG00000025180) #23	SSR4 (ENSPCOG00000028866) #24	IDH3G (ENSPCOG00000023374) #25	SRPK3 (ENSPCOG00000018569) #26	PLXNB3 (ENSPCOG00000024468) #27	ABCD1 (ENSPCOG00000016908) #28	BCAP31 (ENSPCOG00000017960) #29	ENSPCOG00000024763 #30	PNCK (ENSPCOG00000019463) #31	DUSP9 (ENSPCOG00000021779) #32	CCNQ (ENSPCOG00000020959) #33	ATP2B3 (ENSPCOG00000022001) #34	BGN (ENSPCOG00000018303) #35	HAUS7 (ENSPCOG00000016936) #37	TREX2 (ENSPCOG00000022646)
Greater bamboo lemur	MODERN SPECIES	265			TKTL1 (ENSPSMG00000022591) #11	TEX28 (ENSPSMG00000022603) #12	ENSPSMG00000022609 #13	MECP2 (ENSPSMG00000022685) #14	ENSPSMG00000022715	IRAK1 (ENSPSMG00000022745) #15	TMEM187 (ENSPSMG00000022767) #16	HCFC1 (ENSPSMG00000022815) #17	RENBP (ENSPSMG00000022840) #18	NAA10 (ENSPSMG00000022912) #19	ARHGAP4 (ENSPSMG00000023028) #20	AVPR2 (ENSPSMG00000023097) #21	ENSPSMG00000023102	L1CAM (ENSPSMG00000023248) #22	PDZD4 (ENSPSMG00000023341) #23	SSR4 (ENSPSMG00000023367) #24	IDH3G (ENSPSMG00000023441) #25	SRPK3 (ENSPSMG00000023528) #26	ENSPSMG00000023542 #27	ABCD1 (ENSPSMG00000023552) #28	BCAP31 (ENSPSMG00000023562) #29
Mouse lemur	MODERN SPECIES	169	ENSMICG00000044069	NBDY (ENSMICG00000036898)	ENSMICG00000042349	UBQLN2 (ENSMICG00000027033)	KLF8 (ENSMICG00000001146)	TKTL1 (ENSMICG00000035660) #11	ENSMICG00000011536 #13	MECP2 (ENSMICG00000005149) #14	IRAK1 (ENSMICG00000005136) #15	TMEM187 (ENSMICG00000033392) #16	HCFC1 (ENSMICG00000016286) #17	RENBP (ENSMICG00000033869) #18	NAA10 (ENSMICG00000010278) #19	ARHGAP4 (ENSMICG00000016246) #20	AVPR2 (ENSMICG00000037091) #21	L1CAM (ENSMICG00000003486) #22	PDZD4 (ENSMICG00000027183) #23	SSR4 (ENSMICG00000003476) #24	IDH3G (ENSMICG00000003472) #25	SRPK3 (ENSMICG00000003464) #26	PLXNB3 (ENSMICG00000003449) #27	ABCD1 (ENSMICG00000003441) #28	BCAP31 (ENSMICG00000003437) #29	ENSMICG00000003428 #30	PNCK (ENSMICG00000013947) #31	DUSP9 (ENSMICG00000044469) #32	CCNQ (ENSMICG00000032354) #33	ATP2B3 (ENSMICG00000000010) #34	BGN (ENSMICG00000000009) #35	HAUS7 (ENSMICG00000000008) #37	TREX2 (ENSMICG00000038278)
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000167437	ENSGT00940000157506 #22	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e.a.b #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b.f #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000167437	ENSGT00940000157506 #22	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e.a.b #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b.f #13	ENSGT00530000063687.b.b.b.e #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000167437.b	ENSGT00940000157506 #22	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e.a.b #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b.f #13	ENSGT00530000063687.b.b.b.e #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000167437.b	ENSGT00940000157506 #22	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e.a.b #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35
Pan	ANCESTRAL SPECIES	6	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b.f #13	ENSGT00530000063687.b.b.b.e #14	ENSGT00390000003897.s.b.a.a.b.f	ENSGT00530000063687.b.b.b.f #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000167437.b	ENSGT00940000157506 #22	ENSGT00390000009405.b.c.a.b	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e.a.b #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35
Bonobo	MODERN SPECIES	369	ENSPPAG00000043116	GDI1 (ENSPPAG00000027756)	ATP6AP1 (ENSPPAG00000036293)	TAFAZZIN (ENSPPAG00000036682)	DNASE1L1 (ENSPPAG00000012889)	ENSPPAG00000034160	MECP2 (ENSPPAG00000034020) #14	ENSPPAG00000042175	IRAK1 (ENSPPAG00000040186) #15	TMEM187 (ENSPPAG00000007444) #16	HCFC1 (ENSPPAG00000044057) #17	RENBP (ENSPPAG00000035978) #18	ENSPPAG00000037021 #19	ARHGAP4 (ENSPPAG00000039545) #20	AVPR2 (ENSPPAG00000034862) #21	L1CAM (ENSPPAG00000042079) #22	ENSPPAG00000001011	PDZD4 (ENSPPAG00000038351) #23	SSR4 (ENSPPAG00000041018) #24	IDH3G (ENSPPAG00000041999) #25	SRPK3 (ENSPPAG00000030197) #26	PLXNB3 (ENSPPAG00000029812) #27	ABCD1 (ENSPPAG00000038979) #28	BCAP31 (ENSPPAG00000033741) #29	SLC6A8 (ENSPPAG00000035106) #30	PNCK (ENSPPAG00000030824) #31	ENSPPAG00000029417	DUSP9 (ENSPPAG00000043656) #32	ENSPPAG00000027886 #33	ATP2B3 (ENSPPAG00000028306) #34	BGN (ENSPPAG00000033259) #35
Chimpanzee	MODERN SPECIES	972	RPL10 (ENSPTRG00000043378)	TKTL1 (ENSPTRG00000022429) #11	TEX28 (ENSPTRG00000022426) #12	OPN1LW (ENSPTRG00000022427) #13	MECP2 (ENSPTRG00000048003) #14	ENSPTRG00000047302	ENSPTRG00000046201	IRAK1 (ENSPTRG00000022423) #15	ENSPTRG00000022422 #16	HCFC1 (ENSPTRG00000022421) #17	RENBP (ENSPTRG00000022420) #18	NAA10 (ENSPTRG00000022419) #19	ARHGAP4 (ENSPTRG00000033931) #20	AVPR2 (ENSPTRG00000033849) #21	ENSPTRG00000039921	L1CAM (ENSPTRG00000022416) #22	ENSPTRG00000045057	PDZD4 (ENSPTRG00000022413) #23	SSR4 (ENSPTRG00000022412) #24	IDH3G (ENSPTRG00000024398) #25	SRPK3 (ENSPTRG00000022410) #26	PLXNB3 (ENSPTRG00000052414) #27	ABCD1 (ENSPTRG00000051738) #28	BCAP31 (ENSPTRG00000046838) #29	ENSPTRG00000050829 #30	PNCK (ENSPTRG00000022404) #31	ENSPTRG00000043668	ENSPTRG00000050474 #32	CCNQ (ENSPTRG00000043565) #33	ATP2B3 (ENSPTRG00000022399) #34	BGN (ENSPTRG00000022541) #35
Human	MODERN SPECIES	1827	FLNA (ENSG00000196924) #8	TKTL1 (ENSG00000007350) #11	TEX28 (ENSG00000278057) #12	OPN1MW3 (ENSG00000269433) #13	OPN1MW2 (ENSG00000166160) #13	OPN1MW (ENSG00000268221) #13	OPN1LW (ENSG00000102076) #13	MECP2 (ENSG00000169057) #14	IRAK1 (ENSG00000184216) #15	TMEM187 (ENSG00000177854) #16	HCFC1 (ENSG00000172534) #17	RENBP (ENSG00000102032) #18	NAA10 (ENSG00000102030) #19	ARHGAP4 (ENSG00000089820) #20	AVPR2 (ENSG00000126895) #21	L1CAM (ENSG00000198910) #22	PDZD4 (ENSG00000067840) #23	SSR4 (ENSG00000180879) #24	IDH3G (ENSG00000067829) #25	SRPK3 (ENSG00000184343) #26	PLXNB3 (ENSG00000198753) #27	ABCD1 (ENSG00000101986) #28	BCAP31 (ENSG00000185825) #29	SLC6A8 (ENSG00000130821) #30	PNCK (ENSG00000130822) #31	DUSP9 (ENSG00000130829) #32	CCNQ (ENSG00000262919) #33	ATP2B3 (ENSG00000067842) #34	BGN (ENSG00000182492) #35	HAUS7 (ENSG00000213397) #37	TREX2 (ENSG00000183479)
Gorilla	MODERN SPECIES	481																L1CAM (ENSGGOG00000040352) #22
Orangutan	MODERN SPECIES	242	DNASE1L1 (ENSPPYG00000020875)	RPL10 (ENSPPYG00000020874)	EMD (ENSPPYG00000020873) #7	FLNA (ENSPPYG00000020871) #8	TKTL1 (ENSPPYG00000020870) #11	TEX28 (ENSPPYG00000020869) #12	ENSPPYG00000020867 #13	MECP2 (ENSPPYG00000020866) #14	IRAK1 (ENSPPYG00000020865) #15	TMEM187 (ENSPPYG00000020864) #16	HCFC1 (ENSPPYG00000020863) #17	RENBP (ENSPPYG00000020862) #18	NAA10 (ENSPPYG00000020861) #19	ARHGAP4 (ENSPPYG00000020860) #20	ENSPPYG00000020859 #21	L1CAM (ENSPPYG00000020858) #22	ENSPPYG00000031511	PDZD4 (ENSPPYG00000020857) #23	SSR4 (ENSPPYG00000020856) #24	IDH3G (ENSPPYG00000020855) #25	SRPK3 (ENSPPYG00000020854) #26	ABCD1 (ENSPPYG00000020852) #28	BCAP31 (ENSPPYG00000020850) #29	SLC6A8 (ENSPPYG00000037616) #30	ENSPPYG00000020848 #31	ENSPPYG00000031169	DUSP9 (ENSPPYG00000020847) #32	CCNQ (ENSPPYG00000020846) #33	ATP2B3 (ENSPPYG00000020845) #34	BGN (ENSPPYG00000020844) #35	HAUS7 (ENSPPYG00000020843) #37
Gibbon	MODERN SPECIES	449	ENSNLEG00000028143	EMD (ENSNLEG00000014117) #7	FLNA (ENSNLEG00000013842) #8	TKTL1 (ENSNLEG00000013813) #11	TEX28 (ENSNLEG00000013808) #12	ENSNLEG00000013787 #13	ENSNLEG00000013783 #14	ENSNLEG00000013767 #15	TMEM187 (ENSNLEG00000013763) #16	HCFC1 (ENSNLEG00000026624) #17	ENSNLEG00000013753 #18	NAA10 (ENSNLEG00000013724) #19	ARHGAP4 (ENSNLEG00000013678) #20	AVPR2 (ENSNLEG00000013671) #21	ENSNLEG00000031864	L1CAM (ENSNLEG00000013647) #22	ENSNLEG00000034251	PDZD4 (ENSNLEG00000013626) #23	SSR4 (ENSNLEG00000013602) #24	IDH3G (ENSNLEG00000013540) #25	ENSNLEG00000013518 #26	PLXNB3 (ENSNLEG00000013475) #27	ABCD1 (ENSNLEG00000013458) #28	BCAP31 (ENSNLEG00000013380) #29	PNCK (ENSNLEG00000013336) #31	ENSNLEG00000027939	DUSP9 (ENSNLEG00000013321) #32	CCNQ (ENSNLEG00000013298) #33	ATP2B3 (ENSNLEG00000032741) #34	BGN (ENSNLEG00000013250) #35	ENSNLEG00000031253 #37
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37
Olive baboon	MODERN SPECIES	792	PLXNA3 (ENSPANG00000022718)	LAGE3 (ENSPANG00000021408)	UBL4A (ENSPANG00000010838)	SLC10A3 (ENSPANG00000014876)	TKTL1 (ENSPANG00000011938) #11	TEX28 (ENSPANG00000041590) #12	OPN1LW (ENSPANG00000011135) #13	MECP2 (ENSPANG00000011691) #14	IRAK1 (ENSPANG00000015781) #15	TMEM187 (ENSPANG00000050796) #16	HCFC1 (ENSPANG00000024276) #17	RENBP (ENSPANG00000008961) #18	NAA10 (ENSPANG00000014390) #19	ARHGAP4 (ENSPANG00000010087) #20	AVPR2 (ENSPANG00000004382) #21	L1CAM (ENSPANG00000013145) #22	PDZD4 (ENSPANG00000000291) #23	SSR4 (ENSPANG00000006591) #24	IDH3G (ENSPANG00000023323) #25	SRPK3 (ENSPANG00000004220) #26	PLXNB3 (ENSPANG00000008014) #27	ABCD1 (ENSPANG00000025399) #28	CCNQ (ENSPANG00000026424) #33	DUSP9 (ENSPANG00000004029) #32	PNCK (ENSPANG00000013747) #31	SLC6A8 (ENSPANG00000010089) #30	BCAP31 (ENSPANG00000001625) #29	ATP2B3 (ENSPANG00000014878) #34	BGN (ENSPANG00000022851) #35	HAUS7 (ENSPANG00000014066) #37	TREX2 (ENSPANG00000039672)
Cercopithecinae_d	ANCESTRAL SPECIES	141		ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37
Drill	MODERN SPECIES	1411	EMD (ENSMLEG00000038835) #7	FLNA (ENSMLEG00000037979) #8	TKTL1 (ENSMLEG00000031544) #11	ENSMLEG00000035487 #12	ENSMLEG00000028186 #12	ENSMLEG00000033448 #13	MECP2 (ENSMLEG00000032763) #14	ENSMLEG00000027410	ENSMLEG00000009357	IRAK1 (ENSMLEG00000029062) #15	HCFC1 (ENSMLEG00000042451) #17	RENBP (ENSMLEG00000038487) #18	NAA10 (ENSMLEG00000032424) #19	ARHGAP4 (ENSMLEG00000038659) #20	AVPR2 (ENSMLEG00000042889) #21	L1CAM (ENSMLEG00000036326) #22	PDZD4 (ENSMLEG00000004595) #23	SSR4 (ENSMLEG00000016802) #24	IDH3G (ENSMLEG00000038908) #25	PLXNB3 (ENSMLEG00000032454) #27	ABCD1 (ENSMLEG00000041428) #28	BCAP31 (ENSMLEG00000042884) #29	SLC6A8 (ENSMLEG00000042530) #30	PNCK (ENSMLEG00000027716) #31	ENSMLEG00000027362	DUSP9 (ENSMLEG00000042559) #32	CCNQ (ENSMLEG00000039950) #33	ATP2B3 (ENSMLEG00000032665) #34	BGN (ENSMLEG00000029067) #35	HAUS7 (ENSMLEG00000038483) #37	ZFP92 (ENSMLEG00000013319)
Sooty mangabey	MODERN SPECIES	286		EMD (ENSCATG00000030421) #7	FLNA (ENSCATG00000041295) #8	TKTL1 (ENSCATG00000033495) #11	TEX28 (ENSCATG00000040472) #12	ENSCATG00000040717 #13	MECP2 (ENSCATG00000017038) #14	ENSCATG00000018741	ENSCATG00000020302	IRAK1 (ENSCATG00000044264) #15	HCFC1 (ENSCATG00000022004) #17	RENBP (ENSCATG00000037009) #18	NAA10 (ENSCATG00000038709) #19	ARHGAP4 (ENSCATG00000042499) #20	AVPR2 (ENSCATG00000036647) #21	L1CAM (ENSCATG00000041515) #22	PDZD4 (ENSCATG00000043997) #23	SSR4 (ENSCATG00000006344) #24	IDH3G (ENSCATG00000042112) #25	SRPK3 (ENSCATG00000045096) #26	PLXNB3 (ENSCATG00000037895) #27	ABCD1 (ENSCATG00000042536) #28	BCAP31 (ENSCATG00000043253) #29	SLC6A8 (ENSCATG00000001771) #30	PNCK (ENSCATG00000041955) #31	ENSCATG00000003729	DUSP9 (ENSCATG00000009164) #32	CCNQ (ENSCATG00000013187) #33	ENSCATG00000032628
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a.c.b	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00940000162887	ENSGT01030000234522.C.b.e.a.a.a.a.a.b.d
Rhesus	MODERN SPECIES	327	FLNA (ENSMMUG00000013668) #8	EMD (ENSMMUG00000013678) #7	TKTL1 (ENSMMUG00000013667) #11	ENSMMUG00000050314 #12	ENSMMUG00000054361 #13	ENSMMUG00000055487 #12	ENSMMUG00000006166 #13	MECP2 (ENSMMUG00000018704) #14	IRAK1 (ENSMMUG00000018703) #15	TMEM187 (ENSMMUG00000005132) #16	HCFC1 (ENSMMUG00000000319) #17	RENBP (ENSMMUG00000000320) #18	NAA10 (ENSMMUG00000000322) #19	ARHGAP4 (ENSMMUG00000000323) #20	AVPR2 (ENSMMUG00000064945) #21	L1CAM (ENSMMUG00000003379) #22	PDZD4 (ENSMMUG00000003377) #23	SSR4 (ENSMMUG00000003375) #24	IDH3G (ENSMMUG00000003374) #25	SRPK3 (ENSMMUG00000003372) #26	ABCD1 (ENSMMUG00000012746) #28	BCAP31 (ENSMMUG00000012744) #29	SLC6A8 (ENSMMUG00000012742) #30	PNCK (ENSMMUG00000010585) #31	DUSP9 (ENSMMUG00000056988) #32	CCNQ (ENSMMUG00000011480) #33	ATP2B3 (ENSMMUG00000011478) #34	BGN (ENSMMUG00000012743) #35	HAUS7 (ENSMMUG00000012739) #37	ZFP92 (ENSMMUG00000057937)	PNMA6E (ENSMMUG00000045255)
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000040824	FLNA (ENSMFAG00000035790) #8	EMD (ENSMFAG00000045316) #7	TKTL1 (ENSMFAG00000031072) #11	ENSMFAG00000059786 #12	ENSMFAG00000039596 #12	ENSMFAG00000043960 #13	ENSMFAG00000049901	MECP2 (ENSMFAG00000033178) #14	IRAK1 (ENSMFAG00000042818) #15	HCFC1 (ENSMFAG00000035763) #17	RENBP (ENSMFAG00000044051) #18	NAA10 (ENSMFAG00000044161) #19	ARHGAP4 (ENSMFAG00000038733) #20	AVPR2 (ENSMFAG00000043716) #21	L1CAM (ENSMFAG00000030653) #22	PDZD4 (ENSMFAG00000031705) #23	SSR4 (ENSMFAG00000041921) #24	IDH3G (ENSMFAG00000036641) #25	SRPK3 (ENSMFAG00000035943) #26	BCAP31 (ENSMFAG00000039860) #29	SLC6A8 (ENSMFAG00000032070) #30	PNCK (ENSMFAG00000039202) #31	ENSMFAG00000065537	CCNQ (ENSMFAG00000044349) #33	BGN (ENSMFAG00000001443) #35	HAUS7 (ENSMFAG00000041248) #37	PNMA6E (ENSMFAG00000036391)	ENSMFAG00000049740	ENSMFAG00000034548	MAGEA1 (ENSMFAG00000000436)
Pig-tailed macaque	MODERN SPECIES	390						ENSMNEG00000033070 #13	MECP2 (ENSMNEG00000017455) #14	ENSMNEG00000037974	ENSMNEG00000003405	IRAK1 (ENSMNEG00000021597) #15	HCFC1 (ENSMNEG00000033780) #17	RENBP (ENSMNEG00000038526) #18	NAA10 (ENSMNEG00000034261) #19	ARHGAP4 (ENSMNEG00000039860) #20	AVPR2 (ENSMNEG00000029040) #21	L1CAM (ENSMNEG00000042796) #22	PDZD4 (ENSMNEG00000041450) #23	SSR4 (ENSMNEG00000042721) #24	IDH3G (ENSMNEG00000042620) #25	SRPK3 (ENSMNEG00000030566) #26	PLXNB3 (ENSMNEG00000032414) #27	ABCD1 (ENSMNEG00000033571) #28	BCAP31 (ENSMNEG00000028474) #29	SLC6A8 (ENSMNEG00000005457) #30	PNCK (ENSMNEG00000040586) #31	ENSMNEG00000028994	DUSP9 (ENSMNEG00000040094) #32	CCNQ (ENSMNEG00000042079) #33	ATP2B3 (ENSMNEG00000044784) #34	BGN (ENSMNEG00000042759) #35	HAUS7 (ENSMNEG00000036428) #37
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000006746	PLXNA3 (ENSCSAG00000006756)	EMD (ENSCSAG00000006760) #7	FLNA (ENSCSAG00000006772) #8	TKTL1 (ENSCSAG00000006779) #11	TEX28 (ENSCSAG00000006786) #12	ENSCSAG00000006792 #13	MECP2 (ENSCSAG00000006798) #14	IRAK1 (ENSCSAG00000006804) #15	TMEM187 (ENSCSAG00000000523) #16	HCFC1 (ENSCSAG00000006809) #17	RENBP (ENSCSAG00000006814) #18	NAA10 (ENSCSAG00000006823) #19	ARHGAP4 (ENSCSAG00000006854) #20	AVPR2 (ENSCSAG00000006857) #21	L1CAM (ENSCSAG00000006864) #22	PDZD4 (ENSCSAG00000006871) #23	SSR4 (ENSCSAG00000006874) #24	IDH3G (ENSCSAG00000006879) #25	SRPK3 (ENSCSAG00000006884) #26	PLXNB3 (ENSCSAG00000006893) #27	BCAP31 (ENSCSAG00000006911) #29	SLC6A8 (ENSCSAG00000006918) #30	PNCK (ENSCSAG00000006923) #31	DUSP9 (ENSCSAG00000006926) #32	CCNQ (ENSCSAG00000006940) #33	ATP2B3 (ENSCSAG00000006948) #34	BGN (ENSCSAG00000006954) #35	ENSCSAG00000006955 #36	HAUS7 (ENSCSAG00000006961) #37	ZFP92 (ENSCSAG00000006967)
Rhinopithecus	ANCESTRAL SPECIES	195							ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00390000015797.c.a	ENSGT00940000161880 #32	ENSGT00940000155445.e #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37
Golden snub-nosed monkey	MODERN SPECIES	977											HCFC1 (ENSRROG00000004412) #17	RENBP (ENSRROG00000034139) #18	NAA10 (ENSRROG00000041881) #19	ARHGAP4 (ENSRROG00000045508) #20	AVPR2 (ENSRROG00000036522) #21	L1CAM (ENSRROG00000041494) #22	PDZD4 (ENSRROG00000042678) #23	SSR4 (ENSRROG00000035638) #24	IDH3G (ENSRROG00000044366) #25	SRPK3 (ENSRROG00000011319) #26	PLXNB3 (ENSRROG00000039660) #27	ABCD1 (ENSRROG00000037289) #28	BCAP31 (ENSRROG00000045725) #29	SLC6A8 (ENSRROG00000045113) #30	PNCK (ENSRROG00000044383) #31	ENSRROG00000039351	DUSP9 (ENSRROG00000037162) #32	CCNQ (ENSRROG00000038429) #33	ATP2B3 (ENSRROG00000043666) #34	BGN (ENSRROG00000042294) #35	HAUS7 (ENSRROG00000005507) #37
Black snub-nosed monkey	MODERN SPECIES	661					MECP2 (ENSRBIG00000042958) #14	ENSRBIG00000036061	ENSRBIG00000044898	ENSRBIG00000019564	IRAK1 (ENSRBIG00000037074) #15	HCFC1 (ENSRBIG00000038921) #17	RENBP (ENSRBIG00000020101) #18	NAA10 (ENSRBIG00000040703) #19	ARHGAP4 (ENSRBIG00000031629) #20	ENSRBIG00000034619 #21	ENSRBIG00000032383 #21	L1CAM (ENSRBIG00000036638) #22	PDZD4 (ENSRBIG00000029436) #23	SSR4 (ENSRBIG00000015579) #24	IDH3G (ENSRBIG00000035445) #25	PLXNB3 (ENSRBIG00000026773) #27	ABCD1 (ENSRBIG00000044662) #28	BCAP31 (ENSRBIG00000043421) #29	SLC6A8 (ENSRBIG00000040899) #30	PNCK (ENSRBIG00000039714) #31	ENSRBIG00000028856	DUSP9 (ENSRBIG00000031725) #32	CCNQ (ENSRBIG00000034283) #33	ATP2B3 (ENSRBIG00000030237) #34	BGN (ENSRBIG00000043894) #35	HAUS7 (ENSRBIG00000038209) #37	ZFP92 (ENSRBIG00000027712)
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00390000003897.s.b.a.b.b.n	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426.a #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a.f #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445.c #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Cebidae	ANCESTRAL SPECIES	27	ENSGT00390000003897.s.b.a.b.b.n	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426.a #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a.f #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445.c #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Cebidae_a	ANCESTRAL SPECIES	78	ENSGT00390000003897.s.b.a.b.b.n	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426.a #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a.f #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445.c #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00940000162887
Capuchin	MODERN SPECIES	597					ENSCCAG00000034334 #11	ENSCCAG00000036350 #13	MECP2 (ENSCCAG00000037407) #14	ENSCCAG00000028727	ENSCCAG00000020001	IRAK1 (ENSCCAG00000023583) #15	HCFC1 (ENSCCAG00000021425) #17	RENBP (ENSCCAG00000037940) #18	ENSCCAG00000033959 #19	ARHGAP4 (ENSCCAG00000025262) #20	AVPR2 (ENSCCAG00000028592) #21	L1CAM (ENSCCAG00000032233) #22	PDZD4 (ENSCCAG00000022158) #23	SSR4 (ENSCCAG00000020454) #24	SRPK3 (ENSCCAG00000021599) #26	PLXNB3 (ENSCCAG00000024352) #27	ABCD1 (ENSCCAG00000019717) #28	BCAP31 (ENSCCAG00000033187) #29	SLC6A8 (ENSCCAG00000035546) #30	PNCK (ENSCCAG00000021403) #31	ENSCCAG00000023569	DUSP9 (ENSCCAG00000033198) #32	CCNQ (ENSCCAG00000029897) #33	ATP2B3 (ENSCCAG00000027100) #34	BGN (ENSCCAG00000018493) #35	HAUS7 (ENSCCAG00000030265) #37	ZFP92 (ENSCCAG00000034129)
Bolivian squirrel monkey	MODERN SPECIES	236	ENSSBOG00000025724	EMD (ENSSBOG00000027560) #7	FLNA (ENSSBOG00000035541) #8	TKTL1 (ENSSBOG00000020176) #11	TEX28 (ENSSBOG00000035728) #12	ENSSBOG00000022236 #13	ENSSBOG00000025722	MECP2 (ENSSBOG00000024999) #14	ENSSBOG00000017747	IRAK1 (ENSSBOG00000018599) #15	HCFC1 (ENSSBOG00000034222) #17	RENBP (ENSSBOG00000034728) #18	ENSSBOG00000020071 #19	ARHGAP4 (ENSSBOG00000023946) #20	AVPR2 (ENSSBOG00000031595) #21	L1CAM (ENSSBOG00000033301) #22	PDZD4 (ENSSBOG00000033217) #23	SSR4 (ENSSBOG00000022316) #24	IDH3G (ENSSBOG00000019899) #25	SRPK3 (ENSSBOG00000024085) #26	PLXNB3 (ENSSBOG00000025081) #27	ABCD1 (ENSSBOG00000024968) #28	ENSSBOG00000028295 #29	ENSSBOG00000033535 #30	PNCK (ENSSBOG00000031039) #31	DUSP9 (ENSSBOG00000001225) #32	ENSSBOG00000029871 #33	ATP2B3 (ENSSBOG00000032052) #34	BGN (ENSSBOG00000029980) #35	HAUS7 (ENSSBOG00000028472) #37	ZFP92 (ENSSBOG00000028775)
Marmoset	MODERN SPECIES	78	ATP6AP1 (ENSCJAG00000040642)	ENSCJAG00000016995	DNASE1L1 (ENSCJAG00000011800)	ENSCJAG00000011822	EMD (ENSCJAG00000011853) #7	FLNA (ENSCJAG00000034881) #8	TKTL1 (ENSCJAG00000014368) #11	TEX28 (ENSCJAG00000042631) #12	ENSCJAG00000014412 #13	MECP2 (ENSCJAG00000016796) #14	IRAK1 (ENSCJAG00000014452) #15	RENBP (ENSCJAG00000014500) #18	NAA10 (ENSCJAG00000014506) #19	AVPR2 (ENSCJAG00000011022) #21	ARHGAP4 (ENSCJAG00000011008) #20	L1CAM (ENSCJAG00000011023) #22	ENSCJAG00000022809	ENSCJAG00000074256	SSR4 (ENSCJAG00000011167) #24	PDZD4 (ENSCJAG00000011185) #23	SRPK3 (ENSCJAG00000011233) #26	PLXNB3 (ENSCJAG00000011267) #27	ABCD1 (ENSCJAG00000011337) #28	BCAP31 (ENSCJAG00000011348) #29	ENSCJAG00000011356 #30	ENSCJAG00000081213 #31	DUSP9 (ENSCJAG00000047408) #32	ENSCJAG00000011407 #33	ATP2B3 (ENSCJAG00000011413) #34	BGN (ENSCJAG00000011493) #35	HAUS7 (ENSCJAG00000036194) #37
Mas night monkey	MODERN SPECIES	1312					TKTL1 (ENSANAG00000030105) #11	ENSANAG00000030933 #8	ENSANAG00000034691 #13	MECP2 (ENSANAG00000019603) #14	ENSANAG00000019708	IRAK1 (ENSANAG00000030752) #15	HCFC1 (ENSANAG00000030898) #17	RENBP (ENSANAG00000034421) #18	NAA10 (ENSANAG00000019745) #19	ARHGAP4 (ENSANAG00000023680) #20	AVPR2 (ENSANAG00000022496) #21	L1CAM (ENSANAG00000035752) #22	PDZD4 (ENSANAG00000026191) #23	SSR4 (ENSANAG00000035059) #24	ENSANAG00000024077 #25	SRPK3 (ENSANAG00000037077) #26	PLXNB3 (ENSANAG00000036384) #27	ABCD1 (ENSANAG00000035583) #28	BCAP31 (ENSANAG00000035222) #29	ENSANAG00000037607 #30	PNCK (ENSANAG00000010774) #31	DUSP9 (ENSANAG00000019919) #32	ENSANAG00000000457 #33	ATP2B3 (ENSANAG00000032972) #34	BGN (ENSANAG00000033529) #35	HAUS7 (ENSANAG00000022685) #37	ZFP92 (ENSANAG00000038344)
Tarsier	MODERN SPECIES	3169																L1CAM (ENSTSYG00000025729) #22	ENSTSYG00000034265
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Glires	ANCESTRAL SPECIES	10	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Rodentia	ANCESTRAL SPECIES	10	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Muroidea	ANCESTRAL SPECIES	13	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Cricetinae	ANCESTRAL SPECIES	46	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Chinese hamster chok1gshd	MODERN SPECIES	16	TAZ (ENSCGRG00001016189)	DNASE1L1 (ENSCGRG00001019882)	ENSCGRG00001008387	Emd (ENSCGRG00001023962) #7	Flna (ENSCGRG00001013154) #8	ENSCGRG00001010950	Tex28 (ENSCGRG00001014288) #12	Opn1mw (ENSCGRG00001024157) #13	Mecp2 (ENSCGRG00001017650) #14	ENSCGRG00001022957	Irak1 (ENSCGRG00001013928) #15	Hcfc1 (ENSCGRG00001019535) #17	Naa10 (ENSCGRG00001012595) #19	Arhgap4 (ENSCGRG00001023232) #20	Avpr2 (ENSCGRG00001010799) #21	L1cam (ENSCGRG00001020541) #22	Pdzd4 (ENSCGRG00001012732) #23	Ssr4 (ENSCGRG00001019369) #24	Idh3g (ENSCGRG00001012756) #25	Srpk3 (ENSCGRG00001005920) #26	Plxnb3 (ENSCGRG00001024658) #27	Abcd1 (ENSCGRG00001017773) #28	ENSCGRG00001022627 #29	Slc6a8 (ENSCGRG00001013941) #30	Pnck (ENSCGRG00001015654) #31	Dusp9 (ENSCGRG00001015656) #32	Atp2b3 (ENSCGRG00001013946) #34	Bgn (ENSCGRG00001004273) #35	Haus7 (ENSCGRG00001014259) #37	Trex2 (ENSCGRG00001012110)	Zfp92 (ENSCGRG00001024615)
Golden Hamster	MODERN SPECIES	857	Fam50a (ENSMAUG00000020359)	Gdi1 (ENSMAUG00000001476)	Atp6ap1 (ENSMAUG00000014514)	Tafazzin (ENSMAUG00000001836)	Dnase1l1 (ENSMAUG00000005714)	ENSMAUG00000013615	Emd (ENSMAUG00000016655) #7	Tex28 (ENSMAUG00000011775) #12	Opn1mw (ENSMAUG00000017549) #13	Mecp2 (ENSMAUG00000018195) #14	Irak1 (ENSMAUG00000002430) #15	Hcfc1 (ENSMAUG00000018495) #17	Naa10 (ENSMAUG00000019021) #19	Arhgap4 (ENSMAUG00000020011) #20	Avpr2 (ENSMAUG00000001098) #21	L1cam (ENSMAUG00000008575) #22	Pdzd4 (ENSMAUG00000000466) #23	ENSMAUG00000015090 #24	Idh3g (ENSMAUG00000000657) #25	Srpk3 (ENSMAUG00000009935) #26	Plxnb3 (ENSMAUG00000005458) #27	Abcd1 (ENSMAUG00000020103) #28	Bcap31 (ENSMAUG00000009135) #29	Slc6a8 (ENSMAUG00000017007) #30	Pnck (ENSMAUG00000017486) #31	Dusp9 (ENSMAUG00000020993) #32	Atp2b3 (ENSMAUG00000009992) #34	Bgn (ENSMAUG00000020050) #35	Haus7 (ENSMAUG00000020073) #37	Trex2 (ENSMAUG00000006617)	Zfp92 (ENSMAUG00000006204)
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v.i #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Northern American deer mouse	MODERN SPECIES	475	Tafazzin (ENSPEMG00000007822)	Dnase1l1 (ENSPEMG00000013008)	ENSPEMG00000015703	Emd (ENSPEMG00000012081) #7	Flna (ENSPEMG00000009562) #8	Tktl1 (ENSPEMG00000012644) #11	Tex28 (ENSPEMG00000009005) #12	Opn1mw (ENSPEMG00000010994) #13	Mecp2 (ENSPEMG00000015115) #14	ENSPEMG00000025112	Irak1 (ENSPEMG00000001469) #15	Hcfc1 (ENSPEMG00000011837) #17	ENSPEMG00000010870 #18	Arhgap4 (ENSPEMG00000019112) #20	Avpr2 (ENSPEMG00000008325) #21	L1cam (ENSPEMG00000011592) #22	Pdzd4 (ENSPEMG00000008494) #23	Ssr4 (ENSPEMG00000008760) #24	Idh3g (ENSPEMG00000011232) #25	Srpk3 (ENSPEMG00000012149) #26	Plxnb3 (ENSPEMG00000019022) #27	Abcd1 (ENSPEMG00000010748) #28	Bcap31 (ENSPEMG00000018100) #29	ENSPEMG00000001387 #30	Pnck (ENSPEMG00000018929) #31	Dusp9 (ENSPEMG00000009249) #32	Atp2b3 (ENSPEMG00000001607) #34	Bgn (ENSPEMG00000017164) #35	Haus7 (ENSPEMG00000011467) #37	Trex2 (ENSPEMG00000004918)	Zfp92 (ENSPEMG00000029357)
Prairie vole	MODERN SPECIES	212											Hcfc1 (ENSMOCG00000018390) #17	Renbp (ENSMOCG00000021137) #18	Naa10 (ENSMOCG00000011968) #19	Arhgap4 (ENSMOCG00000010795) #20	Avpr2 (ENSMOCG00000012257) #21	L1cam (ENSMOCG00000018901) #22	Pdzd4 (ENSMOCG00000013342) #23	Ssr4 (ENSMOCG00000000481) #24	Idh3g (ENSMOCG00000013265) #25	Srpk3 (ENSMOCG00000000270) #26	Plxnb3 (ENSMOCG00000016754) #27	Abcd1 (ENSMOCG00000020381) #28	Bcap31 (ENSMOCG00000011355) #29	Slc6a8 (ENSMOCG00000013922) #30	Pnck (ENSMOCG00000005305) #31	Dusp9 (ENSMOCG00000014149) #32	Atp2b3 (ENSMOCG00000016837) #34	Bgn (ENSMOCG00000005439) #35	ENSMOCG00000016829 #37	Trex2 (ENSMOCG00000001305)	Zfp92 (ENSMOCG00000015417)
Murinae	ANCESTRAL SPECIES	14	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Mus	ANCESTRAL SPECIES	9	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Mus_A	ANCESTRAL SPECIES	15	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Mus_B	ANCESTRAL SPECIES	14	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Mus_C	ANCESTRAL SPECIES	27	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887
Steppe mouse	MODERN SPECIES	1647														Arhgap4 (ENSMSIG00000009525) #20	Avpr2 (ENSMSIG00000010047) #21	L1cam (ENSMSIG00000010072) #22
spretus	MODERN SPECIES	19	Tafazzin (MGP_SPRETEiJ_G0034333)	Dnase1l1 (MGP_SPRETEiJ_G0034332)	MGP_SPRETEiJ_G0034331	Emd (MGP_SPRETEiJ_G0034330) #7	Flna (MGP_SPRETEiJ_G0034329) #8	Tktl1 (MGP_SPRETEiJ_G0034328) #11	Tex28 (MGP_SPRETEiJ_G0034327) #12	Opn1mw (MGP_SPRETEiJ_G0034326) #13	Mecp2 (MGP_SPRETEiJ_G0034325) #14	Irak1 (MGP_SPRETEiJ_G0034324) #15	Hcfc1 (MGP_SPRETEiJ_G0034323) #17	Renbp (MGP_SPRETEiJ_G0034322) #18	Naa10 (MGP_SPRETEiJ_G0034321) #19	Avpr2 (MGP_SPRETEiJ_G0034320) #21	Arhgap4 (MGP_SPRETEiJ_G0034319) #20	L1cam (MGP_SPRETEiJ_G0034318) #22	Pdzd4 (MGP_SPRETEiJ_G0034317) #23	Ssr4 (MGP_SPRETEiJ_G0034316) #24	Idh3g (MGP_SPRETEiJ_G0034315) #25	Srpk3 (MGP_SPRETEiJ_G0034314) #26	Plxnb3 (MGP_SPRETEiJ_G0034313) #27	Abcd1 (MGP_SPRETEiJ_G0034312) #28	Bcap31 (MGP_SPRETEiJ_G0034311) #29	Slc6a8 (MGP_SPRETEiJ_G0034310) #30	Pnck (MGP_SPRETEiJ_G0034309) #31	Dusp9 (MGP_SPRETEiJ_G0034308) #32	Atp2b3 (MGP_SPRETEiJ_G0034307) #34	Bgn (MGP_SPRETEiJ_G0034306) #35	Haus7 (MGP_SPRETEiJ_G0034305) #37	Trex2 (MGP_SPRETEiJ_G0034304)	Zfp92 (MGP_SPRETEiJ_G0034303)
Mouse	MODERN SPECIES	37	Tafazzin (ENSMUSG00000009995)	Dnase1l1 (ENSMUSG00000019088)	Rpl10 (ENSMUSG00000008682)	Emd (ENSMUSG00000001964) #7	Flna (ENSMUSG00000031328) #8	Tktl1 (ENSMUSG00000031397) #11	Tex28 (ENSMUSG00000062564) #12	Opn1mw (ENSMUSG00000031394) #13	Mecp2 (ENSMUSG00000031393) #14	Irak1 (ENSMUSG00000031392) #15	Hcfc1 (ENSMUSG00000031386) #17	Renbp (ENSMUSG00000031387) #18	Naa10 (ENSMUSG00000031388) #19	Avpr2 (ENSMUSG00000031390) #21	Arhgap4 (ENSMUSG00000031389) #20	L1cam (ENSMUSG00000031391) #22	Pdzd4 (ENSMUSG00000002006) #23	Ssr4 (ENSMUSG00000002014) #24	Idh3g (ENSMUSG00000002010) #25	Srpk3 (ENSMUSG00000002007) #26	Plxnb3 (ENSMUSG00000031385) #27	Abcd1 (ENSMUSG00000031378) #28	Bcap31 (ENSMUSG00000002015) #29	Slc6a8 (ENSMUSG00000019558) #30	Pnck (ENSMUSG00000002012) #31	Dusp9 (ENSMUSG00000031383) #32	Atp2b3 (ENSMUSG00000031376) #34	Bgn (ENSMUSG00000031375) #35	Haus7 (ENSMUSG00000031371) #37	Trex2 (ENSMUSG00000031372)	Zfp92 (ENSMUSG00000031374)
Ryukyu mouse	MODERN SPECIES	19	Tafazzin (MGP_CAROLIEiJ_G0033178)	Dnase1l1 (MGP_CAROLIEiJ_G0033177)	MGP_CAROLIEiJ_G0033176	Emd (MGP_CAROLIEiJ_G0033175) #7	Flna (MGP_CAROLIEiJ_G0033174) #8	Tktl1 (MGP_CAROLIEiJ_G0033173) #11	Tex28 (MGP_CAROLIEiJ_G0033172) #12	Opn1mw (MGP_CAROLIEiJ_G0033171) #13	Mecp2 (MGP_CAROLIEiJ_G0033170) #14	Irak1 (MGP_CAROLIEiJ_G0033169) #15	Hcfc1 (MGP_CAROLIEiJ_G0033168) #17	Renbp (MGP_CAROLIEiJ_G0033167) #18	Naa10 (MGP_CAROLIEiJ_G0033166) #19	Avpr2 (MGP_CAROLIEiJ_G0033165) #21	Arhgap4 (MGP_CAROLIEiJ_G0033164) #20	L1cam (MGP_CAROLIEiJ_G0033163) #22	Pdzd4 (MGP_CAROLIEiJ_G0033162) #23	Ssr4 (MGP_CAROLIEiJ_G0033161) #24	Idh3g (MGP_CAROLIEiJ_G0033160) #25	Srpk3 (MGP_CAROLIEiJ_G0033159) #26	Plxnb3 (MGP_CAROLIEiJ_G0033158) #27	Abcd1 (MGP_CAROLIEiJ_G0033157) #28	Bcap31 (MGP_CAROLIEiJ_G0033156) #29	Slc6a8 (MGP_CAROLIEiJ_G0033155) #30	Pnck (MGP_CAROLIEiJ_G0033154) #31	Dusp9 (MGP_CAROLIEiJ_G0033153) #32	Atp2b3 (MGP_CAROLIEiJ_G0033152) #34	Bgn (MGP_CAROLIEiJ_G0033151) #35	Haus7 (MGP_CAROLIEiJ_G0033150) #37	Trex2 (MGP_CAROLIEiJ_G0033149)	Zfp92 (MGP_CAROLIEiJ_G0033148)
Shrew mouse	MODERN SPECIES	23	Tafazzin (MGP_PahariEiJ_G0031721)	Dnase1l1 (MGP_PahariEiJ_G0031720)	MGP_PahariEiJ_G0031719	Emd (MGP_PahariEiJ_G0031718) #7	Flna (MGP_PahariEiJ_G0031717) #8	MGP_PahariEiJ_G0031716 #11	Tex28 (MGP_PahariEiJ_G0031715) #12	Opn1mw (MGP_PahariEiJ_G0031714) #13	Mecp2 (MGP_PahariEiJ_G0031713) #14	Irak1 (MGP_PahariEiJ_G0031712) #15	Hcfc1 (MGP_PahariEiJ_G0031711) #17	Renbp (MGP_PahariEiJ_G0031710) #18	Naa10 (MGP_PahariEiJ_G0031709) #19	Avpr2 (MGP_PahariEiJ_G0031708) #21	Arhgap4 (MGP_PahariEiJ_G0031707) #20	L1cam (MGP_PahariEiJ_G0031706) #22	Pdzd4 (MGP_PahariEiJ_G0031705) #23	Ssr4 (MGP_PahariEiJ_G0031704) #24	Idh3g (MGP_PahariEiJ_G0031703) #25	Srpk3 (MGP_PahariEiJ_G0031702) #26	Plxnb3 (MGP_PahariEiJ_G0031701) #27	Abcd1 (MGP_PahariEiJ_G0031700) #28	Bcap31 (MGP_PahariEiJ_G0031699) #29	Slc6a8 (MGP_PahariEiJ_G0031698) #30	Pnck (MGP_PahariEiJ_G0031697) #31	Dusp9 (MGP_PahariEiJ_G0031696) #32	Atp2b3 (MGP_PahariEiJ_G0031695) #34	Bgn (MGP_PahariEiJ_G0031694) #35	Haus7 (MGP_PahariEiJ_G0031693) #37	Trex2 (MGP_PahariEiJ_G0031692)	MGP_PahariEiJ_G0031691
Rat	MODERN SPECIES	46	ENSRNOG00000063225	Dnase1l1 (ENSRNOG00000055641)	Rpl10 (ENSRNOG00000056765)	Emd (ENSRNOG00000058882) #7	Flna (ENSRNOG00000054890) #8	Tktl1 (ENSRNOG00000055557) #11	Tex28 (ENSRNOG00000051438) #12	Opn1mw (ENSRNOG00000051529) #13	Mecp2 (ENSRNOG00000056659) #14	Irak1 (ENSRNOG00000060869) #15	Hcfc1 (ENSRNOG00000051948) #17	Renbp (ENSRNOG00000054765) #18	Naa10 (ENSRNOG00000060063) #19	Avpr2 (ENSRNOG00000059862) #21	Arhgap4 (ENSRNOG00000058545) #20	L1cam (ENSRNOG00000061230) #22	Pdzd4 (ENSRNOG00000056174) #23	Ssr4 (ENSRNOG00000053172) #24	Idh3g (ENSRNOG00000055572) #25	Srpk3 (ENSRNOG00000054548) #26	Plxnb3 (ENSRNOG00000061731) #27	Abcd1 (ENSRNOG00000056524) #28	Bcap31 (ENSRNOG00000055756) #29	Slc6a8 (ENSRNOG00000057620) #30	Pnck (ENSRNOG00000058317) #31	Dusp9 (ENSRNOG00000055185) #32	AABR07071935.1 (ENSRNOG00000061441)	Atp2b3 (ENSRNOG00000061304) #34	Bgn (ENSRNOG00000055962) #35	Haus7 (ENSRNOG00000055648) #37	Trex2 (ENSRNOG00000056983)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Atp6ap1 (ENSNGAG00000021512)	Tafazzin (ENSNGAG00000008680)	Dnase1l1 (ENSNGAG00000024155)	ENSNGAG00000023746	Emd (ENSNGAG00000018770) #7	Flna (ENSNGAG00000013524) #8	Tex28 (ENSNGAG00000023701) #12	Opn1mw (ENSNGAG00000011604) #13	Mecp2 (ENSNGAG00000009171) #14	Irak1 (ENSNGAG00000011647) #15	Hcfc1 (ENSNGAG00000013083) #17	Renbp (ENSNGAG00000021686) #18	Naa10 (ENSNGAG00000020303) #19	Arhgap4 (ENSNGAG00000015413) #20	Avpr2 (ENSNGAG00000009849) #21	L1cam (ENSNGAG00000013550) #22	Pdzd4 (ENSNGAG00000009443) #23	ENSNGAG00000015787 #24	Idh3g (ENSNGAG00000017889) #25	Srpk3 (ENSNGAG00000021121) #26	Plxnb3 (ENSNGAG00000023368) #27	Abcd1 (ENSNGAG00000023420) #28	Bcap31 (ENSNGAG00000005195) #29	Slc6a8 (ENSNGAG00000012992) #30	Pnck (ENSNGAG00000024203) #31	Dusp9 (ENSNGAG00000022463) #32	ENSNGAG00000022572 #33	Atp2b3 (ENSNGAG00000023103) #34	Bgn (ENSNGAG00000020236) #35	Haus7 (ENSNGAG00000004509) #37	Trex2 (ENSNGAG00000022556)
Lesser Egyptian jerboa	MODERN SPECIES	224	Tafazzin (ENSJJAG00000015233)	ENSJJAG00000014235	Emd (ENSJJAG00000019656) #7	Flna (ENSJJAG00000015450) #8	Tktl1 (ENSJJAG00000010328) #11	Tex28 (ENSJJAG00000019769) #12	Opn1mw (ENSJJAG00000022699) #13	ENSJJAG00000022596	Mecp2 (ENSJJAG00000022463) #14	Irak1 (ENSJJAG00000013849) #15	Hcfc1 (ENSJJAG00000012815) #17	Renbp (ENSJJAG00000010739) #18	Naa10 (ENSJJAG00000023398) #19	Arhgap4 (ENSJJAG00000021798) #20	Avpr2 (ENSJJAG00000018314) #21	L1cam (ENSJJAG00000021077) #22	Pdzd4 (ENSJJAG00000018534) #23	Ssr4 (ENSJJAG00000017842) #24	Idh3g (ENSJJAG00000015962) #25	Srpk3 (ENSJJAG00000019785) #26	Plxnb3 (ENSJJAG00000017006) #27	Abcd1 (ENSJJAG00000012430) #28	Bcap31 (ENSJJAG00000011510) #29	Slc6a8 (ENSJJAG00000022046) #30	Pnck (ENSJJAG00000020546) #31	Dusp9 (ENSJJAG00000018570) #32	Atp2b3 (ENSJJAG00000014975) #34	Bgn (ENSJJAG00000014050) #35	Haus7 (ENSJJAG00000011304) #37	Trex2 (ENSJJAG00000012484)	Zfp92 (ENSJJAG00000024019)
Kangaroo rat	MODERN SPECIES	526	Atp6ap1 (ENSDORG00000008847)	Tafazzin (ENSDORG00000029677)	ENSDORG00000004369	Flna (ENSDORG00000004370) #8	Emd (ENSDORG00000004375) #7	Tktl1 (ENSDORG00000013785) #11	Tex28 (ENSDORG00000010136) #12	Opn1mw (ENSDORG00000026454) #13	Mecp2 (ENSDORG00000014978) #14	Irak1 (ENSDORG00000013876) #15	Hcfc1 (ENSDORG00000002756) #17	Renbp (ENSDORG00000002755) #18	Naa10 (ENSDORG00000002753) #19	Arhgap4 (ENSDORG00000002750) #20	Avpr2 (ENSDORG00000002747) #21	L1cam (ENSDORG00000014093) #22	Pdzd4 (ENSDORG00000028112) #23	Ssr4 (ENSDORG00000006030) #24	Idh3g (ENSDORG00000006029) #25	Srpk3 (ENSDORG00000006026) #26	Plxnb3 (ENSDORG00000006024) #27	Abcd1 (ENSDORG00000006023) #28	Bcap31 (ENSDORG00000006022) #29	Slc6a8 (ENSDORG00000001174) #30	Pnck (ENSDORG00000014186) #31	Dusp9 (ENSDORG00000024222) #32	ENSDORG00000012846 #33	Atp2b3 (ENSDORG00000013038) #34	ENSDORG00000001237 #35	Haus7 (ENSDORG00000001235) #37	Trex2 (ENSDORG00000023727)
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Marmotini	ANCESTRAL SPECIES	83	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Marmotini_b	ANCESTRAL SPECIES	124	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Arctic ground squirrel	MODERN SPECIES	562						TKTL1 (ENSUPAG00010010904) #11	TEX28 (ENSUPAG00010010912) #12	ENSUPAG00010010918 #13	MECP2 (ENSUPAG00010010936) #14	IRAK1 (ENSUPAG00010010971) #15	HCFC1 (ENSUPAG00010011877) #17	RENBP (ENSUPAG00010011941) #18	NAA10 (ENSUPAG00010011976) #19	ARHGAP4 (ENSUPAG00010012018) #20	AVPR2 (ENSUPAG00010012191) #21	L1CAM (ENSUPAG00010012204) #22	PDZD4 (ENSUPAG00010012358) #23	SSR4 (ENSUPAG00010012375) #24	IDH3G (ENSUPAG00010012400) #25	SRPK3 (ENSUPAG00010012441) #26	ENSUPAG00010012465 #27	ENSUPAG00010012496	ABCD1 (ENSUPAG00010012506) #28	ENSUPAG00010012523 #30	PNCK (ENSUPAG00010012527) #31	DUSP9 (ENSUPAG00010012557) #32	CCNQ (ENSUPAG00010012574) #33	ATP2B3 (ENSUPAG00010012590) #34	BGN (ENSUPAG00010012684) #35	HAUS7 (ENSUPAG00010012697) #37	TREX2 (ENSUPAG00010012721)
Squirrel	MODERN SPECIES	409	TAFAZZIN (ENSSTOG00000011873)	DNASE1L1 (ENSSTOG00000011867)	ENSSTOG00000011857	EMD (ENSSTOG00000014689) #7	FLNA (ENSSTOG00000005036) #8	TKTL1 (ENSSTOG00000005014) #11	TEX28 (ENSSTOG00000022078) #12	ENSSTOG00000024701 #13	MECP2 (ENSSTOG00000006094) #14	IRAK1 (ENSSTOG00000007991) #15	HCFC1 (ENSSTOG00000029220) #17	RENBP (ENSSTOG00000010247) #18	NAA10 (ENSSTOG00000010237) #19	ARHGAP4 (ENSSTOG00000022503) #20	AVPR2 (ENSSTOG00000008352) #21	L1CAM (ENSSTOG00000008316) #22	PDZD4 (ENSSTOG00000021423) #23	SSR4 (ENSSTOG00000008278) #24	IDH3G (ENSSTOG00000008261) #25	SRPK3 (ENSSTOG00000008233) #26	PLXNB3 (ENSSTOG00000008197) #27	ENSSTOG00000008188	ABCD1 (ENSSTOG00000008153) #28	BCAP31 (ENSSTOG00000008138) #29	ENSSTOG00000026886 #30	PNCK (ENSSTOG00000008119) #31	DUSP9 (ENSSTOG00000008115) #32	CCNQ (ENSSTOG00000008103) #33	ATP2B3 (ENSSTOG00000008068) #34	BGN (ENSSTOG00000008058) #35	HAUS7 (ENSSTOG00000022988) #37
Alpin marmot	MODERN SPECIES	136	TAFAZZIN (ENSMMMG00000014302)	DNASE1L1 (ENSMMMG00000014299)	ENSMMMG00000014279	EMD (ENSMMMG00000014270) #7	FLNA (ENSMMMG00000010080) #8	TKTL1 (ENSMMMG00000010036) #11	TEX28 (ENSMMMG00000010023) #12	ENSMMMG00000010010 #13	MECP2 (ENSMMMG00000009970) #14	IRAK1 (ENSMMMG00000009239) #15	HCFC1 (ENSMMMG00000009171) #17	RENBP (ENSMMMG00000009149) #18	ENSMMMG00000009143 #19	ARHGAP4 (ENSMMMG00000008497) #20	AVPR2 (ENSMMMG00000008488) #21	L1CAM (ENSMMMG00000008292) #22	PDZD4 (ENSMMMG00000008247) #23	SSR4 (ENSMMMG00000008221) #24	IDH3G (ENSMMMG00000008193) #25	PLXNB3 (ENSMMMG00000008113) #27	ABCD1 (ENSMMMG00000008089) #28	BCAP31 (ENSMMMG00000008080) #29	ENSMMMG00000008033 #30	CCNQ (ENSMMMG00000008029) #33	ATP2B3 (ENSMMMG00000007918) #34	BGN (ENSMMMG00000007908) #35	HAUS7 (ENSMMMG00000007880) #37	TREX2 (ENSMMMG00000007872)	ENSMMMG00000007851	ENSMMMG00000007824	ENSMMMG00000007802
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Hystricomorpha_b	ANCESTRAL SPECIES	84	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Long-tailed chinchilla	MODERN SPECIES	287	ATP6AP1 (ENSCLAG00000002132)	TAFAZZIN (ENSCLAG00000010970)	DNASE1L1 (ENSCLAG00000003494)	ENSCLAG00000003108	FLNA (ENSCLAG00000003106) #8	EMD (ENSCLAG00000002874) #7	TKTL1 (ENSCLAG00000001825) #11	ENSCLAG00000001715 #13	MECP2 (ENSCLAG00000001648) #14	IRAK1 (ENSCLAG00000006192) #15	HCFC1 (ENSCLAG00000004175) #17	RENBP (ENSCLAG00000003810) #18	NAA10 (ENSCLAG00000001427) #19	ENSCLAG00000001334 #20	AVPR2 (ENSCLAG00000002650) #21	L1CAM (ENSCLAG00000001453) #22	PDZD4 (ENSCLAG00000002707) #23	SSR4 (ENSCLAG00000002670) #24	IDH3G (ENSCLAG00000002456) #25	SRPK3 (ENSCLAG00000001932) #26	PLXNB3 (ENSCLAG00000001828) #27	ABCD1 (ENSCLAG00000001650) #28	BCAP31 (ENSCLAG00000002843) #29	ENSCLAG00000002550 #30	PNCK (ENSCLAG00000002167) #31	DUSP9 (ENSCLAG00000008316) #32	CCNQ (ENSCLAG00000008202) #33	ATP2B3 (ENSCLAG00000006386) #34	BGN (ENSCLAG00000003040) #35	HAUS7 (ENSCLAG00000002789) #37	TREX2 (ENSCLAG00000002698)
Degu	MODERN SPECIES	259	ENSODEG00000003868	EMD (ENSODEG00000003890) #7	FLNA (ENSODEG00000004055) #8	TKTL1 (ENSODEG00000004431) #11	ENSODEG00000004454	ENSODEG00000004473 #13	ENSODEG00000004516	MECP2 (ENSODEG00000004523) #14	IRAK1 (ENSODEG00000004583) #15	HCFC1 (ENSODEG00000004823) #17	RENBP (ENSODEG00000005065) #18	ENSODEG00000005100 #19	ARHGAP4 (ENSODEG00000005124) #20	AVPR2 (ENSODEG00000005166) #21	ENSODEG00000005204	L1CAM (ENSODEG00000005259) #22	PDZD4 (ENSODEG00000005482) #23	SSR4 (ENSODEG00000002732) #24	IDH3G (ENSODEG00000002774) #25	SRPK3 (ENSODEG00000002869) #26	PLXNB3 (ENSODEG00000002965) #27	ABCD1 (ENSODEG00000003127) #28	BCAP31 (ENSODEG00000003174) #29	ENSODEG00000003207 #30	PNCK (ENSODEG00000003252) #31	DUSP9 (ENSODEG00000003261) #32	CCNQ (ENSODEG00000003285) #33	ATP2B3 (ENSODEG00000003358) #34	BGN (ENSODEG00000003451) #35	HAUS7 (ENSODEG00000003475) #37	TREX2 (ENSODEG00000019142)
Guinea pig	MODERN SPECIES	148	ATP6AP1 (ENSCPOG00000005972)	TAFAZZIN (ENSCPOG00000020454)	DNASE1L1 (ENSCPOG00000005648)	ENSCPOG00000002355	EMD (ENSCPOG00000002642) #7	FLNA (ENSCPOG00000002672) #8	TKTL1 (ENSCPOG00000011767) #11	ENSCPOG00000021789 #12	ENSCPOG00000011198 #13	MECP2 (ENSCPOG00000012579) #14	IRAK1 (ENSCPOG00000039151) #15	ENSCPOG00000024784 #18	NAA10 (ENSCPOG00000011495) #19	ENSCPOG00000026143 #20	AVPR2 (ENSCPOG00000012697) #21	L1CAM (ENSCPOG00000005519) #22	PDZD4 (ENSCPOG00000019482) #23	SSR4 (ENSCPOG00000006898) #24	IDH3G (ENSCPOG00000006890) #25	SRPK3 (ENSCPOG00000006881) #26	PLXNB3 (ENSCPOG00000006868) #27	ABCD1 (ENSCPOG00000011702) #28	BCAP31 (ENSCPOG00000008510) #29	ENSCPOG00000011710 #30	DUSP9 (ENSCPOG00000000114) #32	CCNQ (ENSCPOG00000009250) #33	ATP2B3 (ENSCPOG00000005102) #34	BGN (ENSCPOG00000023628) #35	HAUS7 (ENSCPOG00000007497) #37	TREX2 (ENSCPOG00000025702)	ZFP92 (ENSCPOG00000006654)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000039319	GDI1 (ENSHGLG00000003275)	ATP6AP1 (ENSHGLG00000002607)	ENSHGLG00000009984	DNASE1L1 (ENSHGLG00000013868)	RPL10 (ENSHGLG00000002349)	TKTL1 (ENSHGLG00000042978) #11	ENSHGLG00000043472 #12	MECP2 (ENSHGLG00000000899) #14	IRAK1 (ENSHGLG00000002116) #15	HCFC1 (ENSHGLG00000001143) #17	RENBP (ENSHGLG00000009835) #18	NAA10 (ENSHGLG00000002773) #19	ARHGAP4 (ENSHGLG00000000857) #20	AVPR2 (ENSHGLG00000006784) #21	L1CAM (ENSHGLG00000003403) #22	PDZD4 (ENSHGLG00000001939) #23	SSR4 (ENSHGLG00000001720) #24	IDH3G (ENSHGLG00000000443) #25	PLXNB3 (ENSHGLG00000002203) #27	ABCD1 (ENSHGLG00000001000) #28	BCAP31 (ENSHGLG00000000710) #29	ENSHGLG00000037294 #30	PNCK (ENSHGLG00000006098) #31	DUSP9 (ENSHGLG00000004236) #32	CCNQ (ENSHGLG00000003517) #33	ATP2B3 (ENSHGLG00000000642) #34	BGN (ENSHGLG00000004010) #35	HAUS7 (ENSHGLG00000002908) #37	TREX2 (ENSHGLG00000008010)	ENSHGLG00000035589
Lagomorpha	ANCESTRAL SPECIES	103	ENSGT00940000156650	ENSGT00390000018621	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Rabbit	MODERN SPECIES	549	TAFAZZIN (ENSOCUG00000000885)	RA_m006_jsm7BED4f (ENSOCUG00000024511) #8	EMD (ENSOCUG00000000882) #7	FLNA (ENSOCUG00000000880) #8	TKTL1 (ENSOCUG00000000883) #11	TEX28 (ENSOCUG00000021000) #12	OPN1MW (ENSOCUG00000011466) #13	MECP2 (ENSOCUG00000013147) #14	IRAK1 (ENSOCUG00000025860) #15	TMEM187 (ENSOCUG00000001116) #16	HCFC1 (ENSOCUG00000001113) #17	RENBP (ENSOCUG00000025840) #18	NAA10 (ENSOCUG00000001111) #19	ARHGAP4 (ENSOCUG00000001107) #20	AVPR2 (ENSOCUG00000015695) #21	L1CAM (ENSOCUG00000001102) #22	PDZD4 (ENSOCUG00000017200) #23	ENSOCUG00000026260 #30	SSR4 (ENSOCUG00000027360) #24	IDH3G (ENSOCUG00000016554) #25	ABCD1 (ENSOCUG00000017922) #28	PLXNB3 (ENSOCUG00000016506) #27	BCAP31 (ENSOCUG00000017921) #29	PNCK (ENSOCUG00000002399) #31	DUSP9 (ENSOCUG00000021158) #32	CCNQ (ENSOCUG00000002393) #33	ATP2B3 (ENSOCUG00000029623) #34	BGN (ENSOCUG00000023931) #35	ENSOCUG00000002376 #37	TREX2 (ENSOCUG00000025054)
Pika	MODERN SPECIES	4525																ENSOPRG00000005387 #22
Tree shrew	MODERN SPECIES	5109																L1CAM (ENSTBEG00000001642) #22
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Suina	ANCESTRAL SPECIES	7	ENSGT00390000003897.s.b.a.a.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Pig	MODERN SPECIES	300	RPL10 (ENSSSCG00000035997)	FLNA (ENSSSCG00000033299) #8	EMD (ENSSSCG00000037777) #7	TKTL1 (ENSSSCG00000029443) #11	TEX28 (ENSSSCG00000029513) #12	ENSSSCG00000029523 #13	MECP2 (ENSSSCG00000034742) #14	ENSSSCG00000059337	IRAK1 (ENSSSCG00000012795) #15	ENSSSCG00000050581 #16	HCFC1 (ENSSSCG00000012793) #17	RENBP (ENSSSCG00000012792) #18	NAA10 (ENSSSCG00000012791) #19	ARHGAP4 (ENSSSCG00000012790) #20	AVPR2 (ENSSSCG00000012789) #21	L1CAM (ENSSSCG00000012787) #22	PDZD4 (ENSSSCG00000012785) #23	SSR4 (ENSSSCG00000012784) #24	IDH3G (ENSSSCG00000012783) #25	ENSSSCG00000053900 #26	ENSSSCG00000024676 #26	PLXNB3 (ENSSSCG00000012780) #27	ABCD1 (ENSSSCG00000012779) #28	BCAP31 (ENSSSCG00000012772) #29	PNCK (ENSSSCG00000012773) #31	DUSP9 (ENSSSCG00000012774) #32	CCNQ (ENSSSCG00000012770) #33	ATP2B3 (ENSSSCG00000012769) #34	SLC6A8 (ENSSSCG00000012771) #30	BGN (ENSSSCG00000012766) #35	HAUS7 (ENSSSCG00000012767) #37
Chacoan peccary	MODERN SPECIES	64				TKTL1 (ENSCWAG00000008685) #11	TEX28 (ENSCWAG00000008873) #12	ENSCWAG00000008922 #13	MECP2 (ENSCWAG00000009014) #14	ENSCWAG00000009215	IRAK1 (ENSCWAG00000009234) #15	TMEM187 (ENSCWAG00000009330) #16	HCFC1 (ENSCWAG00000009363) #17	RENBP (ENSCWAG00000009675) #18	NAA10 (ENSCWAG00000009933) #19	ARHGAP4 (ENSCWAG00000010083) #20	AVPR2 (ENSCWAG00000010837) #21	L1CAM (ENSCWAG00000010938) #22	PDZD4 (ENSCWAG00000011881) #23	SSR4 (ENSCWAG00000012103) #24	IDH3G (ENSCWAG00000012166) #25	SRPK3 (ENSCWAG00000012244) #26	PLXNB3 (ENSCWAG00000013064) #27	ABCD1 (ENSCWAG00000013367) #28	BCAP31 (ENSCWAG00000013428) #29	ENSCWAG00000013485 #30	PNCK (ENSCWAG00000013628) #31	DUSP9 (ENSCWAG00000013930) #32	CCNQ (ENSCWAG00000013960) #33	ATP2B3 (ENSCWAG00000014036) #34	BGN (ENSCWAG00000015339) #35
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Cetacea	ANCESTRAL SPECIES	19	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034.i #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v.e.a #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034.i #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v.e.a #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034.i #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v.e.a #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Beluga whale	MODERN SPECIES	139	ATP6AP1 (ENSDLEG00000011212)	TAZ (ENSDLEG00000011183)	DNASE1L1 (ENSDLEG00000011154)	ENSDLEG00000011125	EMD (ENSDLEG00000011102) #7	FLNA (ENSDLEG00000010999) #8	TKTL1 (ENSDLEG00000010974) #11	ENSDLEG00000010916 #13	MECP2 (ENSDLEG00000010908) #14	IRAK1 (ENSDLEG00000010892) #15	TMEM187 (ENSDLEG00000010884) #16	HCFC1 (ENSDLEG00000010826) #17	RENBP (ENSDLEG00000010782) #18	ARHGAP4 (ENSDLEG00000010745) #20	AVPR2 (ENSDLEG00000010715) #21	L1CAM (ENSDLEG00000010633) #22	PDZD4 (ENSDLEG00000010618) #23	SSR4 (ENSDLEG00000010578) #24	IDH3G (ENSDLEG00000010539) #25	SRPK3 (ENSDLEG00000009748) #26	PLXNB3 (ENSDLEG00000009548) #27	ABCD1 (ENSDLEG00000009490) #28	BCAP31 (ENSDLEG00000009436) #29	ENSDLEG00000009357 #30	PNCK (ENSDLEG00000009302) #31	DUSP9 (ENSDLEG00000009275) #32	CCNQ (ENSDLEG00000009254) #33	ATP2B3 (ENSDLEG00000009068) #34	BGN (ENSDLEG00000009001) #35	HAUS7 (ENSDLEG00000008961) #37	TREX2 (ENSDLEG00000008947)
Narwhal	MODERN SPECIES	309	DNASE1L1 (ENSMMNG00015013295)	ENSMMNG00015013277	ENSMMNG00015013213 #7	FLNA (ENSMMNG00015013139) #8	TKTL1 (ENSMMNG00015013076) #11	ENSMMNG00015013056	ENSMMNG00015013048	ENSMMNG00015013034 #13	MECP2 (ENSMMNG00015012982) #14	IRAK1 (ENSMMNG00015012947) #15	TMEM187 (ENSMMNG00015012935) #16	HCFC1 (ENSMMNG00015012895) #17	RENBP (ENSMMNG00015012853) #18	ARHGAP4 (ENSMMNG00015012794) #20	AVPR2 (ENSMMNG00015012757) #21	L1CAM (ENSMMNG00015012599) #22	PDZD4 (ENSMMNG00015012532) #23	SSR4 (ENSMMNG00015012518) #24	IDH3G (ENSMMNG00015012488) #25	SRPK3 (ENSMMNG00015012303) #26	PLXNB3 (ENSMMNG00015012205) #27	ABCD1 (ENSMMNG00015012167) #28	BCAP31 (ENSMMNG00015012134) #29	PNCK (ENSMMNG00015012107) #31	DUSP9 (ENSMMNG00015012090) #32	CCNQ (ENSMMNG00015012078) #33	ATP2B3 (ENSMMNG00015011983) #34	BGN (ENSMMNG00015011917) #35	HAUS7 (ENSMMNG00015011870) #37	TREX2 (ENSMMNG00015011851)	ENSMMNG00015011848
Vaquita	MODERN SPECIES	34	TKTL1 (ENSPSNG00000021994) #11	ENSPSNG00000021965	ENSPSNG00000021951	ENSPSNG00000021942	ENSPSNG00000021927	TEX28 (ENSPSNG00000021914) #12	ENSPSNG00000021893 #13	MECP2 (ENSPSNG00000021858) #14	IRAK1 (ENSPSNG00000021819) #15	TMEM187 (ENSPSNG00000021804) #16	HCFC1 (ENSPSNG00000021713) #17	ENSPSNG00000021660 #18	NAA10 (ENSPSNG00000021621) #19	ARHGAP4 (ENSPSNG00000021560) #20	AVPR2 (ENSPSNG00000021500) #21	L1CAM (ENSPSNG00000021249) #22	PDZD4 (ENSPSNG00000021105) #23	SSR4 (ENSPSNG00000021050) #24	IDH3G (ENSPSNG00000021007) #25	SRPK3 (ENSPSNG00000020624) #26	PLXNB3 (ENSPSNG00000020397) #27	ABCD1 (ENSPSNG00000020339) #28	BCAP31 (ENSPSNG00000020287) #29	ENSPSNG00000020216 #30	PNCK (ENSPSNG00000020162) #31	DUSP9 (ENSPSNG00000020127) #32	CCNQ (ENSPSNG00000020074) #33	ATP2B3 (ENSPSNG00000017785) #34	BGN (ENSPSNG00000017293) #35	HAUS7 (ENSPSNG00000017146) #37	TREX2 (ENSPSNG00000017121)
Dolphin	MODERN SPECIES	2693										HCFC1 (ENSTTRG00000007457) #17	RENBP (ENSTTRG00000007456) #18	NAA10 (ENSTTRG00000007455) #19	ARHGAP4 (ENSTTRG00000007454) #20	AVPR2 (ENSTTRG00000007453) #21	ENSTTRG00000007452	L1CAM (ENSTTRG00000007451) #22
Sperm whale	MODERN SPECIES	13	DNASE1L1 (ENSPCTG00005013759)	RPL10 (ENSPCTG00005013674)	EMD (ENSPCTG00005013517) #7	FLNA (ENSPCTG00005012993) #8	TKTL1 (ENSPCTG00005012476) #11	ENSPCTG00005022081	TEX28 (ENSPCTG00005022073) #12	ENSPCTG00005022067 #13	MECP2 (ENSPCTG00005022045) #14	ENSPCTG00005022009 #15	HCFC1 (ENSPCTG00005021915) #17	RENBP (ENSPCTG00005021884) #18	NAA10 (ENSPCTG00005021859) #19	ARHGAP4 (ENSPCTG00005021658) #20	AVPR2 (ENSPCTG00005021602) #21	L1CAM (ENSPCTG00005021438) #22	PDZD4 (ENSPCTG00005021324) #23	SSR4 (ENSPCTG00005021260) #24	IDH3G (ENSPCTG00005021222) #25	SRPK3 (ENSPCTG00005020896) #26	PLXNB3 (ENSPCTG00005020721) #27	ABCD1 (ENSPCTG00005020693) #28	BCAP31 (ENSPCTG00005020665) #29	SLC6A8 (ENSPCTG00005020619) #30	PNCK (ENSPCTG00005020491) #31	DUSP9 (ENSPCTG00005020457) #32	CCNQ (ENSPCTG00005020427) #33	ATP2B3 (ENSPCTG00005019806) #34	BGN (ENSPCTG00005019735) #35	HAUS7 (ENSPCTG00005019634) #37	ZFP92 (ENSPCTG00005019580)
Blue whale	MODERN SPECIES	40	ENSBMSG00010021119 #11	ENSBMSG00010021096 #11	EMD (ENSBMSG00010021072) #7	FLNA (ENSBMSG00010020850) #8	ENSBMSG00010020592 #11	TEX28 (ENSBMSG00010020541) #12	ENSBMSG00010020090 #13	MECP2 (ENSBMSG00010019964) #14	IRAK1 (ENSBMSG00010019854) #15	TMEM187 (ENSBMSG00010019836) #16	HCFC1 (ENSBMSG00010019528) #17	RENBP (ENSBMSG00010019364) #18	NAA10 (ENSBMSG00010019439) #19	ARHGAP4 (ENSBMSG00010018853) #20	AVPR2 (ENSBMSG00010018770) #21	L1CAM (ENSBMSG00010018510) #22	PDZD4 (ENSBMSG00010018349) #23	SSR4 (ENSBMSG00010018296) #24	IDH3G (ENSBMSG00010018140) #25	SRPK3 (ENSBMSG00010017917) #26	PLXNB3 (ENSBMSG00010017695) #27	ABCD1 (ENSBMSG00010017634) #28	BCAP31 (ENSBMSG00010017577) #29	ENSBMSG00010017516 #30	PNCK (ENSBMSG00010017371) #31	DUSP9 (ENSBMSG00010017328) #32	CCNQ (ENSBMSG00010017295) #33	ATP2B3 (ENSBMSG00010016642) #34	BGN (ENSBMSG00010016563) #35	HAUS7 (ENSBMSG00010016441) #37	TREX2 (ENSBMSG00010016424)
Pecora	ANCESTRAL SPECIES	38	ENSGT00390000003897.s.b.a.a.b.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Percora_a	ANCESTRAL SPECIES	35	ENSGT00390000003897.s.b.a.a.b.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Bovidae	ANCESTRAL SPECIES	33	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Caprinae	ANCESTRAL SPECIES	45	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.a.a	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Rambouillet Sheep	MODERN SPECIES	205	TAFAZZIN (ENSOARG00020020574)	DNASE1L1 (ENSOARG00020021378)	RPL10 (ENSOARG00020021458)	EMD (ENSOARG00020021549) #7	FLNA (ENSOARG00020021631) #8	TKTL1 (ENSOARG00020021994) #11	OPN1LW (ENSOARG00020022140) #13	MECP2 (ENSOARG00020022209) #14	IRAK1 (ENSOARG00020022349) #15	TMEM187 (ENSOARG00020022375) #16	HCFC1 (ENSOARG00020022415) #17	RENBP (ENSOARG00020023053) #18	NAA10 (ENSOARG00020023246) #19	ARHGAP4 (ENSOARG00020023326) #20	AVPR2 (ENSOARG00020023848) #21	L1CAM (ENSOARG00020023921) #22	PDZD4 (ENSOARG00020024315) #23	SSR4 (ENSOARG00020024383) #24	IDH3G (ENSOARG00020024407) #25	PLXNB3 (ENSOARG00020024564) #27	ABCD1 (ENSOARG00020024584) #28	BCAP31 (ENSOARG00020024614) #29	ENSOARG00020024643 #30	PNCK (ENSOARG00020024721) #31	DUSP9 (ENSOARG00020024837) #32	CCNQ (ENSOARG00020024846) #33	ATP2B3 (ENSOARG00020024861) #34	BGN (ENSOARG00020024895) #35	HAUS7 (ENSOARG00020024905) #37	TREX2 (ENSOARG00020024928)	ZFP92 (ENSOARG00020024935)
Goat	MODERN SPECIES	83											HCFC1 (ENSCHIG00000000284) #17	RENBP (ENSCHIG00000000246) #18	NAA10 (ENSCHIG00000000207) #19	ARHGAP4 (ENSCHIG00000000137) #20	AVPR2 (ENSCHIG00000000172) #21	L1CAM (ENSCHIG00000000101) #22
Bovinae	ANCESTRAL SPECIES	46	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Bos	ANCESTRAL SPECIES	36	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Bos_a	ANCESTRAL SPECIES	39	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.a	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Wild yak	MODERN SPECIES	2346												RENBP (ENSBMUG00000012951) #18	NAA10 (ENSBMUG00000012855) #19	ARHGAP4 (ENSBMUG00000012757) #20	AVPR2 (ENSBMUG00000012644) #21	L1CAM (ENSBMUG00000012610) #22	PDZD4 (ENSBMUG00000012542) #23	SSR4 (ENSBMUG00000012499) #24	IDH3G (ENSBMUG00000012493) #25	SRPK3 (ENSBMUG00000012477) #26	PLXNB3 (ENSBMUG00000012298) #27	ABCD1 (ENSBMUG00000012003) #28	BCAP31 (ENSBMUG00000011987) #29	ENSBMUG00000011967 #30	PNCK (ENSBMUG00000011937) #31	DUSP9 (ENSBMUG00000011871) #32
Domestic yak	MODERN SPECIES	69	DNASE1L1 (ENSBGRG00000024010)	ENSBGRG00000023896	EMD (ENSBGRG00000023778) #7	GDI1 (ENSBGRG00000023696)	FLNA (ENSBGRG00000023487) #8	TKTL1 (ENSBGRG00000023403) #11	ENSBGRG00000023305 #13	MECP2 (ENSBGRG00000023220) #14	IRAK1 (ENSBGRG00000023042) #15	TMEM187 (ENSBGRG00000023012) #16	HCFC1 (ENSBGRG00000021965) #17	RENBP (ENSBGRG00000021852) #18	NAA10 (ENSBGRG00000021764) #19	ARHGAP4 (ENSBGRG00000021595) #20	AVPR2 (ENSBGRG00000021537) #21	L1CAM (ENSBGRG00000020974) #22	ENSBGRG00000020944	PDZD4 (ENSBGRG00000020897) #23	ENSBGRG00000020770 #24	IDH3G (ENSBGRG00000020629) #25	SRPK3 (ENSBGRG00000020582) #26	ABCD1 (ENSBGRG00000019899) #28	BCAP31 (ENSBGRG00000019806) #29	ENSBGRG00000019737 #30	ENSBGRG00000019589 #31	DUSP9 (ENSBGRG00000019532) #32	CCNQ (ENSBGRG00000019445) #33	ATP2B3 (ENSBGRG00000019084) #34	BGN (ENSBGRG00000019034) #35	ENSBGRG00000018982 #36	HAUS7 (ENSBGRG00000018702) #37
Bos_b	ANCESTRAL SPECIES	31	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Cow	MODERN SPECIES	177	RPL10 (ENSBTAG00000007454)	EMD (ENSBTAG00000022314) #7	FLNA (ENSBTAG00000011190) #8	TKTL1 (ENSBTAG00000020127) #11	TEX28 (ENSBTAG00000020300) #12	OPN1LW (ENSBTAG00000020299) #13	ENSBTAG00000052492	MECP2 (ENSBTAG00000047855) #14	IRAK1 (ENSBTAG00000016085) #15	TMEM187 (ENSBTAG00000008278) #16	HCFC1 (ENSBTAG00000011904) #17	RENBP (ENSBTAG00000047827) #18	NAA10 (ENSBTAG00000047702) #19	ARHGAP4 (ENSBTAG00000047531) #20	AVPR2 (ENSBTAG00000047138) #21	L1CAM (ENSBTAG00000013462) #22	ENSBTAG00000038379	PDZD4 (ENSBTAG00000021422) #23	SSR4 (ENSBTAG00000021421) #24	IDH3G (ENSBTAG00000001059) #25	SRPK3 (ENSBTAG00000001058) #26	PLXNB3 (ENSBTAG00000010146) #27	ABCD1 (ENSBTAG00000020551) #28	BCAP31 (ENSBTAG00000020547) #29	SLC6A8 (ENSBTAG00000009959) #30	PNCK (ENSBTAG00000017430) #31	DUSP9 (ENSBTAG00000008319) #32	CCNQ (ENSBTAG00000011350) #33	ATP2B3 (ENSBTAG00000000520) #34	BGN (ENSBTAG00000005250) #35	HAUS7 (ENSBTAG00000014095) #37
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005001627	EMD (ENSBIXG00005013423) #7	FLNA (ENSBIXG00005013367) #8	TKTL1 (ENSBIXG00005013244) #11	TEX28 (ENSBIXG00005013213) #12	ENSBIXG00005013198 #13	MECP2 (ENSBIXG00005013169) #14	ENSBIXG00005013100	IRAK1 (ENSBIXG00005013081) #15	TMEM187 (ENSBIXG00005013053) #16	HCFC1 (ENSBIXG00005013025) #17	RENBP (ENSBIXG00005007005) #18	NAA10 (ENSBIXG00005012916) #19	ARHGAP4 (ENSBIXG00005001429) #20	AVPR2 (ENSBIXG00005012700) #21	L1CAM (ENSBIXG00005012618) #22	ENSBIXG00005012493	PDZD4 (ENSBIXG00005012442) #23	SSR4 (ENSBIXG00005012375) #24	SRPK3 (ENSBIXG00005012339) #26	PLXNB3 (ENSBIXG00005012308) #27	ABCD1 (ENSBIXG00005001289) #28	BCAP31 (ENSBIXG00005012267) #29	ENSBIXG00005012235 #30	PNCK (ENSBIXG00005012167) #31	ENSBIXG00005012054 #32	CCNQ (ENSBIXG00005012024) #33	ATP2B3 (ENSBIXG00005001219) #34	BGN (ENSBIXG00005011869) #35	ENSBIXG00005011824 #36	HAUS7 (ENSBIXG00005001172) #37
Siberian musk deer	MODERN SPECIES	14	ENSMMSG00000014152	ENSMMSG00000014213	EMD (ENSMMSG00000014247) #7	FLNA (ENSMMSG00000014357) #8	TKTL1 (ENSMMSG00000015211) #11	TEX28 (ENSMMSG00000015249) #12	ENSMMSG00000015261 #13	ENSMMSG00000015287 #14	IRAK1 (ENSMMSG00000015351) #15	TMEM187 (ENSMMSG00000015428) #16	HCFC1 (ENSMMSG00000015453) #17	RENBP (ENSMMSG00000015497) #18	NAA10 (ENSMMSG00000015542) #19	ARHGAP4 (ENSMMSG00000015607) #20	AVPR2 (ENSMMSG00000015654) #21	L1CAM (ENSMMSG00000015717) #22	PDZD4 (ENSMMSG00000016210) #23	SSR4 (ENSMMSG00000016336) #24	IDH3G (ENSMMSG00000016400) #25	SRPK3 (ENSMMSG00000016477) #26	PLXNB3 (ENSMMSG00000016798) #27	ABCD1 (ENSMMSG00000016894) #28	BCAP31 (ENSMMSG00000016925) #29	ENSMMSG00000016948 #30	PNCK (ENSMMSG00000016992) #31	DUSP9 (ENSMMSG00000017038) #32	CCNQ (ENSMMSG00000017061) #33	ATP2B3 (ENSMMSG00000017117) #34	BGN (ENSMMSG00000017708) #35	HAUS7 (ENSMMSG00000017752) #37	TREX2 (ENSMMSG00000017821)
Yarkand deer	MODERN SPECIES	1323	LAGE3 (ENSCHYG00000024139)	ENSCHYG00000024202	G6PD (ENSCHYG00000024413)	IKBKG (ENSCHYG00000024518)	EMD (ENSCHYG00000024666) #7	TKTL1 (ENSCHYG00000024748) #11	TEX28 (ENSCHYG00000024783) #12	ENSCHYG00000024807 #13	MECP2 (ENSCHYG00000024843) #14	IRAK1 (ENSCHYG00000024907) #15	HCFC1 (ENSCHYG00000025112) #17	RENBP (ENSCHYG00000025248) #18	ENSCHYG00000025281 #19	ARHGAP4 (ENSCHYG00000025566) #20	AVPR2 (ENSCHYG00000025838) #21	L1CAM (ENSCHYG00000025877) #22	PDZD4 (ENSCHYG00000026107) #23	ENSCHYG00000026124 #24	ENSCHYG00000026148 #25	SRPK3 (ENSCHYG00000026187) #26	PLXNB3 (ENSCHYG00000026217) #27	ABCD1 (ENSCHYG00000026259) #28	ENSCHYG00000026299 #29	ENSCHYG00000026332 #30	PNCK (ENSCHYG00000026358) #31	DUSP9 (ENSCHYG00000026372) #32	CCNQ (ENSCHYG00000026390) #33	ATP2B3 (ENSCHYG00000026445) #34	BGN (ENSCHYG00000026554) #35	HAUS7 (ENSCHYG00000026596) #37	TREX2 (ENSCHYG00000026645)
Camelidae	ANCESTRAL SPECIES	80	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00910000146917	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a	ENSGT00940000162887	ENSGT00940000154488.B
Arabian camel	MODERN SPECIES	204	ENSCDRG00005012077	ENSCDRG00005011914 #7	FLNA (ENSCDRG00005011684) #8	TKTL1 (ENSCDRG00005011584) #11	TEX28 (ENSCDRG00005011542) #12	ENSCDRG00005011483 #13	MECP2 (ENSCDRG00005011374) #14	ENSCDRG00005011350	IRAK1 (ENSCDRG00005011306) #15	TMEM187 (ENSCDRG00005011270) #16	HCFC1 (ENSCDRG00005010537) #17	RENBP (ENSCDRG00005010267) #18	NAA10 (ENSCDRG00005010090) #19	ARHGAP4 (ENSCDRG00005009571) #20	AVPR2 (ENSCDRG00005009433) #21	L1CAM (ENSCDRG00005008678) #22	PDZD4 (ENSCDRG00005008529) #23	SSR4 (ENSCDRG00005008385) #24	IDH3G (ENSCDRG00005008174) #25	ENSCDRG00005008129	SRPK3 (ENSCDRG00005020984) #26	ABCD1 (ENSCDRG00005020958) #28	BCAP31 (ENSCDRG00005020943) #29	ENSCDRG00005020937 #30	PNCK (ENSCDRG00005020913) #31	CCNQ (ENSCDRG00005020899) #33	ATP2B3 (ENSCDRG00005020884) #34	BGN (ENSCDRG00005020868) #35	HAUS7 (ENSCDRG00005020839) #37	TREX2 (ENSCDRG00005020829)	ZFP92 (ENSCDRG00005020817)
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00390000003897.s.b.a.a.a	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00910000146500	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.a	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Greater horseshoe bat	MODERN SPECIES		RPL10 (ENSRFEG00010003909)	EMD (ENSRFEG00010004008) #7	FLNA (ENSRFEG00010004101) #8	TKTL1 (ENSRFEG00010004159) #11	TEX28 (ENSRFEG00010004212) #12	ENSRFEG00010004230 #13	MECP2 (ENSRFEG00010004285) #14	IRAK1 (ENSRFEG00010004369) #15	TMEM187 (ENSRFEG00010004460) #16	HCFC1 (ENSRFEG00010004542) #17	RENBP (ENSRFEG00010004689) #18	ARD1A (ENSRFEG00010004730) #19	ARHGAP4 (ENSRFEG00010004760) #20	AVPR2 (ENSRFEG00010004785) #21	ENSRFEG00010004798	L1CAM (ENSRFEG00010004838) #22	PDZD4 (ENSRFEG00010004912) #23	SSR4 (ENSRFEG00010004934) #24	IDH3G (ENSRFEG00010004950) #25	SRPK3 (ENSRFEG00010004974) #26	PLXNB3 (ENSRFEG00010005005) #27	ABCD1 (ENSRFEG00010005067) #28	BCAP31 (ENSRFEG00010005136) #29	ENSRFEG00010005165 #30	PNCK (ENSRFEG00010005195) #31	DUSP9 (ENSRFEG00010005234) #32	CCNQ (ENSRFEG00010005249) #33	ATP2B3 (ENSRFEG00010005284) #34	BGN (ENSRFEG00010005401) #35	HAUS7 (ENSRFEG00010005503) #37	ENSRFEG00010005660 #36
Microbat	MODERN SPECIES	977	ENSMLUG00000014337	FLNA (ENSMLUG00000014316) #8	EMD (ENSMLUG00000005200) #7	TKTL1 (ENSMLUG00000014306) #11	TEX28 (ENSMLUG00000014304) #12	ENSMLUG00000014299 #13	ENSMLUG00000024727	MECP2 (ENSMLUG00000014297) #14	IRAK1 (ENSMLUG00000014288) #15	TMEM187 (ENSMLUG00000014286) #16	HCFC1 (ENSMLUG00000014275) #17	RENBP (ENSMLUG00000014271) #18	NAA10 (ENSMLUG00000014267) #19	ARHGAP4 (ENSMLUG00000014257) #20	AVPR2 (ENSMLUG00000014253) #21	L1CAM (ENSMLUG00000014234) #22	PDZD4 (ENSMLUG00000004464) #23	SSR4 (ENSMLUG00000004462) #24	ENSMLUG00000004457 #25	SRPK3 (ENSMLUG00000004445) #26	PLXNB3 (ENSMLUG00000004428) #27	ABCD1 (ENSMLUG00000004423) #28	BCAP31 (ENSMLUG00000004416) #29	ENSMLUG00000004391 #30	PNCK (ENSMLUG00000008649) #31	DUSP9 (ENSMLUG00000008666) #32	CCNQ (ENSMLUG00000012844) #33	ATP2B3 (ENSMLUG00000010583) #34	ENSMLUG00000010569 #35	ENSMLUG00000025983 #36	ENSMLUG00000010516 #37
Megabat	MODERN SPECIES	3183					TEX28 (ENSPVAG00000000476) #12	ENSPVAG00000000474 #13	MECP2 (ENSPVAG00000000472) #14	IRAK1 (ENSPVAG00000000469) #15	TMEM187 (ENSPVAG00000000467) #16	HCFC1 (ENSPVAG00000000466) #17	RENBP (ENSPVAG00000000464) #18	NAA10 (ENSPVAG00000000463) #19	ARHGAP4 (ENSPVAG00000000462) #20	AVPR2 (ENSPVAG00000000461) #21	ENSPVAG00000000460	L1CAM (ENSPVAG00000000456) #22
Equus	ANCESTRAL SPECIES	52	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Horse	MODERN SPECIES	480	DNASE1L1 (ENSECAG00000003758)	RPL10 (ENSECAG00000017154)	FLNA (ENSECAG00000009550) #8	EMD (ENSECAG00000013908) #7	TKTL1 (ENSECAG00000021992) #11	TEX28 (ENSECAG00000021904) #12	OPN1LW (ENSECAG00000018684) #13	MECP2 (ENSECAG00000018208) #14	IRAK1 (ENSECAG00000009585) #15	TMEM187 (ENSECAG00000001086) #16	HCFC1 (ENSECAG00000022440) #17	RENBP (ENSECAG00000018888) #18	NAA10 (ENSECAG00000015203) #19	ARHGAP4 (ENSECAG00000023201) #20	AVPR2 (ENSECAG00000022974) #21	L1CAM (ENSECAG00000002810) #22	PDZD4 (ENSECAG00000024310) #23	SSR4 (ENSECAG00000023150) #24	IDH3G (ENSECAG00000018509) #25	SRPK3 (ENSECAG00000058187) #26	PLXNB3 (ENSECAG00000000639) #27	ABCD1 (ENSECAG00000022935) #28	BCAP31 (ENSECAG00000022787) #29	SLC6A8 (ENSECAG00000013965) #30	PNCK (ENSECAG00000036146) #31	DUSP9 (ENSECAG00000013650) #32	CCNQ (ENSECAG00000026922) #33	ATP2B3 (ENSECAG00000023490) #34	BGN (ENSECAG00000018717) #35	ECMX (ENSECAG00000018701) #36	HAUS7 (ENSECAG00000016027) #37
Donkey	MODERN SPECIES	36	DNASE1L1 (ENSEASG00005028299)	ENSEASG00005025120	EMD (ENSEASG00005019177) #7	FLNA (ENSEASG00005018577) #8	TKTL1 (ENSEASG00005019179) #11	TEX28 (ENSEASG00005019182) #12	ENSEASG00005019183 #13	MECP2 (ENSEASG00005019188) #14	IRAK1 (ENSEASG00005019196) #15	TMEM187 (ENSEASG00005038494) #16	HCFC1 (ENSEASG00005019244) #17	RENBP (ENSEASG00005019286) #18	NAA10 (ENSEASG00005030165) #19	ARHGAP4 (ENSEASG00005019296) #20	AVPR2 (ENSEASG00005027808) #21	L1CAM (ENSEASG00005019353) #22	PDZD4 (ENSEASG00005028120) #23	SSR4 (ENSEASG00005019363) #24	IDH3G (ENSEASG00005019382) #25	SRPK3 (ENSEASG00005019451) #26	PLXNB3 (ENSEASG00005019471) #27	ABCD1 (ENSEASG00005019529) #28	BCAP31 (ENSEASG00005019531) #29	ENSEASG00005019533 #30	PNCK (ENSEASG00005019534) #31	DUSP9 (ENSEASG00005019536) #32	CCNQ (ENSEASG00005019537) #33	ATP2B3 (ENSEASG00005019538) #34	BGN (ENSEASG00005035268) #35	HAUS7 (ENSEASG00005019556) #37	TREX2 (ENSEASG00005019558)
Carnivora	ANCESTRAL SPECIES	11	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Caniformia	ANCESTRAL SPECIES	22	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Ursidae	ANCESTRAL SPECIES	45	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.h #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C.b #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Giant Panda	MODERN SPECIES	2288	RPL10 (ENSAMEG00000000227)	ENSAMEG00000030923	ENSAMEG00000007261 #8	ENSAMEG00000007222 #7	ENSAMEG00000018441 #11	TEX28 (ENSAMEG00000018444) #12	ENSAMEG00000018445 #13	MECP2 (ENSAMEG00000029148) #14	IRAK1 (ENSAMEG00000018449) #15	TMEM187 (ENSAMEG00000019206) #16	HCFC1 (ENSAMEG00000018450) #17	RENBP (ENSAMEG00000018452) #18	NAA10 (ENSAMEG00000018457) #19	ARHGAP4 (ENSAMEG00000018458) #20	AVPR2 (ENSAMEG00000018460) #21	L1CAM (ENSAMEG00000018461) #22	ENSAMEG00000009528	PDZD4 (ENSAMEG00000018464) #23	SSR4 (ENSAMEG00000018465) #24	IDH3G (ENSAMEG00000018466) #25	SRPK3 (ENSAMEG00000018467) #26	PLXNB3 (ENSAMEG00000018468) #27	ABCD1 (ENSAMEG00000008692) #28	BCAP31 (ENSAMEG00000008719) #29	PNCK (ENSAMEG00000008740) #31	DUSP9 (ENSAMEG00000023668) #32	CCNQ (ENSAMEG00000008792) #33	ATP2B3 (ENSAMEG00000008798) #34	BGN (ENSAMEG00000008895) #35	HAUS7 (ENSAMEG00000008916) #37	TREX2 (ENSAMEG00000008933)
Ursus	ANCESTRAL SPECIES																	ENSGT00940000157506 #22
American black bear	MODERN SPECIES	5530																L1CAM (ENSUAMG00000018840) #22
Mustelinae	ANCESTRAL SPECIES	108	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Ferret	MODERN SPECIES	531	DNASE1L1 (ENSMPUG00000009354)	ENSMPUG00000009320	FLNA (ENSMPUG00000009293) #8	EMD (ENSMPUG00000009232) #7	ENSMPUG00000019510	TKTL1 (ENSMPUG00000009214) #11	TEX28 (ENSMPUG00000009202) #12	ENSMPUG00000009081 #13	MECP2 (ENSMPUG00000009072) #14	IRAK1 (ENSMPUG00000009059) #15	ENSMPUG00000009052	HCFC1 (ENSMPUG00000009029) #17	NAA10 (ENSMPUG00000008989) #19	AVPR2 (ENSMPUG00000008979) #21	ARHGAP4 (ENSMPUG00000008967) #20	L1CAM (ENSMPUG00000008943) #22	PDZD4 (ENSMPUG00000008855) #23	ENSMPUG00000008803 #24	IDH3G (ENSMPUG00000008781) #25	SRPK3 (ENSMPUG00000008795) #26	PLXNB3 (ENSMPUG00000008484) #27	ABCD1 (ENSMPUG00000008475) #28	BCAP31 (ENSMPUG00000008469) #29
American mink	MODERN SPECIES	402	DNASE1L1 (ENSNVIG00000023816)	ENSNVIG00000023818	EMD (ENSNVIG00000023823) #7	FLNA (ENSNVIG00000023832) #8	TKTL1 (ENSNVIG00000023854) #11	TEX28 (ENSNVIG00000023857) #12	ENSNVIG00000023859 #13	MECP2 (ENSNVIG00000023863) #14	IRAK1 (ENSNVIG00000023867) #15	ENSNVIG00000023868 #16	HCFC1 (ENSNVIG00000023869) #17	RENBP (ENSNVIG00000023874) #18	NAA10 (ENSNVIG00000023879) #19	ARHGAP4 (ENSNVIG00000023893) #20	AVPR2 (ENSNVIG00000023918) #21	L1CAM (ENSNVIG00000023921) #22	PDZD4 (ENSNVIG00000023958) #23	SSR4 (ENSNVIG00000023964) #24	IDH3G (ENSNVIG00000023966) #25	SRPK3 (ENSNVIG00000023970) #26	PLXNB3 (ENSNVIG00000023976) #27	ABCD1 (ENSNVIG00000023981) #28	BAP31 (ENSNVIG00000023982) #29	ENSNVIG00000023983 #30	PNCK (ENSNVIG00000023984) #31	DUSP9 (ENSNVIG00000023986) #32	CCNQ (ENSNVIG00000023988) #33	ATP2B3 (ENSNVIG00000023990) #34	BGN (ENSNVIG00000023999) #35	HAUS7 (ENSNVIG00000024002) #37	ZFP92 (ENSNVIG00000024006)
Canidae	ANCESTRAL SPECIES	50	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Dingo	MODERN SPECIES	383	DNASE1L1 (ENSCAFG00020009104)	ENSCAFG00020009114	FLNA (ENSCAFG00020009434) #8	EMD (ENSCAFG00020022046) #7	TKTL1 (ENSCAFG00020022053) #11	ENSCAFG00020022055	TEX28 (ENSCAFG00020022059) #12	ENSCAFG00020022061 #13	MECP2 (ENSCAFG00020022079) #14	IRAK1 (ENSCAFG00020022089) #15	HCFC1 (ENSCAFG00020022091) #17	RENBP (ENSCAFG00020022111) #18	NAA10 (ENSCAFG00020022123) #19	ARHGAP4 (ENSCAFG00020022156) #20	AVPR2 (ENSCAFG00020022923) #21	L1CAM (ENSCAFG00020022925) #22	PDZD4 (ENSCAFG00020022928) #23	SSR4 (ENSCAFG00020022930) #24	IDH3G (ENSCAFG00020022931) #25	SRPK3 (ENSCAFG00020022932) #26	PLXNB3 (ENSCAFG00020022936) #27	ABCD1 (ENSCAFG00020022942) #28	BCAP31 (ENSCAFG00020022946) #29	ENSCAFG00020022949 #30	PNCK (ENSCAFG00020022950) #31	DUSP9 (ENSCAFG00020022952) #32	CCNQ (ENSCAFG00020022953) #33	ATP2B3 (ENSCAFG00020022993) #34	BGN (ENSCAFG00020023184) #35	HAUS7 (ENSCAFG00020023188) #37	TREX2 (ENSCAFG00020023190)
Dog	MODERN SPECIES	144	TAZ (ENSCAFG00845028739)	DNASE1L1 (ENSCAFG00845028675)	RPL10 (ENSCAFG00845028627)	FLNA (ENSCAFG00845027901) #8	EMD (ENSCAFG00845027618) #7	TKTL1 (ENSCAFG00845027442) #11	TEX28 (ENSCAFG00845027400) #12	OPN1LW (ENSCAFG00845027363) #13	MECP2 (ENSCAFG00845027255) #14	IRAK1 (ENSCAFG00845027126) #15	TMEM187 (ENSCAFG00845027090) #16	HCFC1 (ENSCAFG00845026790) #17	RENBP (ENSCAFG00845026554) #19	ARHGAP4 (ENSCAFG00845026108) #20	AVPR2 (ENSCAFG00845026015) #21	L1CAM (ENSCAFG00845025647) #22	PDZD4 (ENSCAFG00845025486) #23	SSR4 (ENSCAFG00845025375) #24	IDH3G (ENSCAFG00845025145) #25	SRPK3 (ENSCAFG00845024967) #26	PLXNB3 (ENSCAFG00845024556) #27	ABCD1 (ENSCAFG00845024327) #28	BCAP31 (ENSCAFG00845024213) #29	ENSCAFG00845023957 #30	ENSCAFG00845023730 #31	DUSP9 (ENSCAFG00845023663) #32	CCNQ (ENSCAFG00845023588) #33	ATP2B3 (ENSCAFG00845023172) #34	BGN (ENSCAFG00845023053) #35	ZFP92 (ENSCAFG00845023007)	ENSCAFG00845022808
Red fox	MODERN SPECIES	263	DNASE1L1 (ENSVVUG00000029556)	RPL10 (ENSVVUG00000029559)	FLNA (ENSVVUG00000029569) #8	EMD (ENSVVUG00000029577) #7	TEX28 (ENSVVUG00000029579) #12	TKTL1 (ENSVVUG00000029580) #11	ENSVVUG00000029585 #13	MECP2 (ENSVVUG00000029591) #14	IRAK1 (ENSVVUG00000029594) #15	TMEM187 (ENSVVUG00000029595) #16	HCFC1 (ENSVVUG00000029596) #17	RENBP (ENSVVUG00000029602) #18	NAA10 (ENSVVUG00000029603) #19	ARHGAP4 (ENSVVUG00000029605) #20	AVPR2 (ENSVVUG00000029607) #21	L1CAM (ENSVVUG00000029611) #22	PDZD4 (ENSVVUG00000029620) #23	ENSVVUG00000029621 #24	IDH3G (ENSVVUG00000029622) #25	PLXNB3 (ENSVVUG00000029634) #27	ENSVVUG00000029694 #28	ENSVVUG00000029695 #28	ENSVVUG00000029696 #29	ENSVVUG00000029699 #30	PNCK (ENSVVUG00000029700) #31	DUSP9 (ENSVVUG00000029702) #32	CCNQ (ENSVVUG00000029705) #33	ATP2B3 (ENSVVUG00000029706) #34	BGN (ENSVVUG00000029707) #35	HAUS7 (ENSVVUG00000029713) #37	TREX2 (ENSVVUG00000029714)
Felidae	ANCESTRAL SPECIES	29	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Panthera	ANCESTRAL SPECIES	56			ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Panthera_a	ANCESTRAL SPECIES	65			ENSGT00390000002034 #7	ENSGT00940000153588.b #8	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869.v #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
lion	MODERN SPECIES	50			FLNA (ENSPLOG00000010685) #8	EMD (ENSPLOG00000010914) #7	TKTL1 (ENSPLOG00000010974) #11	TEX28 (ENSPLOG00000011170) #12	ENSPLOG00000011231 #13	MECP2 (ENSPLOG00000011316) #14	IRAK1 (ENSPLOG00000011465) #15	TMEM187 (ENSPLOG00000011845) #16	HCFC1 (ENSPLOG00000011916) #17	RENBP (ENSPLOG00000012442) #18	NAA10 (ENSPLOG00000012684) #19	ARHGAP4 (ENSPLOG00000012775) #20	AVPR2 (ENSPLOG00000013280) #21	L1CAM (ENSPLOG00000013396) #22	PDZD4 (ENSPLOG00000013907) #23	SSR4 (ENSPLOG00000014154) #24	IDH3G (ENSPLOG00000014245) #25	SRPK3 (ENSPLOG00000014529) #26	PLXNB3 (ENSPLOG00000015318) #27	ABCD1 (ENSPLOG00000015686) #28	BCAP31 (ENSPLOG00000015741) #29	ENSPLOG00000015847 #30	PNCK (ENSPLOG00000015960) #31	DUSP9 (ENSPLOG00000016155) #32	CCNQ (ENSPLOG00000016196) #33	ATP2B3 (ENSPLOG00000016345) #34	BGN (ENSPLOG00000017044) #35	ENSPLOG00000017109 #37	TREX2 (ENSPLOG00000017143)
leopard	MODERN SPECIES	214				EMD (ENSPPRG00000008705) #7	FLNA (ENSPPRG00000008614) #8	TKTL1 (ENSPPRG00000005619) #11	ENSPPRG00000005526 #13	MECP2 (ENSPPRG00000004602) #14	IRAK1 (ENSPPRG00000002790) #15	HCFC1 (ENSPPRG00000001673) #17	RENBP (ENSPPRG00000000874) #18	NAA10 (ENSPPRG00000021297) #19	ARHGAP4 (ENSPPRG00000019046) #20	AVPR2 (ENSPPRG00000011559) #21	ENSPPRG00000011145	L1CAM (ENSPPRG00000010911) #22	PDZD4 (ENSPPRG00000007757) #23	SSR4 (ENSPPRG00000007302) #24	IDH3G (ENSPPRG00000007090) #25	SRPK3 (ENSPPRG00000006472) #26	ABCD1 (ENSPPRG00000003214) #28	BCAP31 (ENSPPRG00000003191) #29	ENSPPRG00000002840 #30	PNCK (ENSPPRG00000002563) #31	ENSPPRG00000000433 #31	DUSP9 (ENSPPRG00000023875) #32	CCNQ (ENSPPRG00000024044) #33	ATP2B3 (ENSPPRG00000024167) #34	BGN (ENSPPRG00000014620) #35	HAUS7 (ENSPPRG00000014451) #37	TREX2 (ENSPPRG00000017457)
Tiger	MODERN SPECIES	437												TKTL1 (ENSPTIG00000019193) #11	ENSPTIG00000002389 #14	RENBP (ENSPTIG00000006094) #18	NAA10 (ENSPTIG00000009128) #19	L1CAM (ENSPTIG00000009761) #22	SSR4 (ENSPTIG00000011737) #24	IDH3G (ENSPTIG00000014592) #25
Cat	MODERN SPECIES	252	TAFAZZIN (ENSFCAG00000023652)	DNASE1L1 (ENSFCAG00000011396)	ENSFCAG00000011395	EMD (ENSFCAG00000011394) #7	FLNA (ENSFCAG00000011393) #8	TKTL1 (ENSFCAG00000011392) #11	TEX28 (ENSFCAG00000044525) #12	OPN1LW (ENSFCAG00000011390) #13	MECP2 (ENSFCAG00000011389) #14	IRAK1 (ENSFCAG00000010847) #15	TMEM187 (ENSFCAG00000011388) #16	HCFC1 (ENSFCAG00000011387) #17	RENBP (ENSFCAG00000018690) #18	NAA10 (ENSFCAG00000028705) #19	AVPR2 (ENSFCAG00000011384) #21	L1CAM (ENSFCAG00000008614) #22	ARHGAP4 (ENSFCAG00000011385) #20	SSR4 (ENSFCAG00000004040) #24	IDH3G (ENSFCAG00000033410) #25	SRPK3 (ENSFCAG00000043991) #26	PLXNB3 (ENSFCAG00000004039) #27	ABCD1 (ENSFCAG00000004038) #28	BCAP31 (ENSFCAG00000004037) #29	ENSFCAG00000004036 #30	PNCK (ENSFCAG00000004035) #31	DUSP9 (ENSFCAG00000004034) #32	CCNQ (ENSFCAG00000004033) #33	ATP2B3 (ENSFCAG00000004031) #34	HAUS7 (ENSFCAG00000004027) #37	TREX2 (ENSFCAG00000018938)	ENSFCAG00000004665
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157506 #22
Hedgehog	MODERN SPECIES	8435																L1CAM (ENSEEUG00000008210) #22
Common shrew	MODERN SPECIES	6651																ENSSARG00000010089 #22
Atlantogenata	ANCESTRAL SPECIES	70	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162426 #11	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00390000003937 #37
Xenarthra	ANCESTRAL SPECIES	442															ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31
Armadillo	MODERN SPECIES	1438															AVPR2 (ENSDNOG00000043252) #21	L1CAM (ENSDNOG00000047606) #22	PDZD4 (ENSDNOG00000034883) #23	SSR4 (ENSDNOG00000025714) #24	IDH3G (ENSDNOG00000001176) #25	SRPK3 (ENSDNOG00000046508) #26	PLXNB3 (ENSDNOG00000043717) #27	ABCD1 (ENSDNOG00000006107) #28	BCAP31 (ENSDNOG00000042487) #29	ENSDNOG00000034957 #30	PNCK (ENSDNOG00000032763) #31
Afrotheria	ANCESTRAL SPECIES	82	ENSGT00390000003897.s.a	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00940000162426 #11	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Afrotheria_a	ANCESTRAL SPECIES	81	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.a	ENSGT00940000153588.b #8	ENSGT00390000002034 #7	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00390000012715.a
Hyrax	MODERN SPECIES	9836																L1CAM (ENSPCAG00000000743) #22
Elephant	MODERN SPECIES	50	FLNA (ENSLAFG00000006359) #8	EMD (ENSLAFG00000005993) #7	ENSLAFG00000005145	ENSLAFG00000005142 #12	ENSLAFG00000010311 #13	ENSLAFG00000027266	MECP2 (ENSLAFG00000016292) #14	IRAK1 (ENSLAFG00000016212) #15	TMEM187 (ENSLAFG00000003455) #16	HCFC1 (ENSLAFG00000004418) #17	ENSLAFG00000028984	RENBP (ENSLAFG00000007027) #18	NAA10 (ENSLAFG00000007025) #19	ARHGAP4 (ENSLAFG00000014809) #20	AVPR2 (ENSLAFG00000027738) #21	L1CAM (ENSLAFG00000021925) #22	PDZD4 (ENSLAFG00000025865) #23	SSR4 (ENSLAFG00000006908) #24	IDH3G (ENSLAFG00000006904) #25	SRPK3 (ENSLAFG00000006899) #26	PLXNB3 (ENSLAFG00000002638) #27	ABCD1 (ENSLAFG00000027794) #28	BCAP31 (ENSLAFG00000022717) #29	ENSLAFG00000012168 #30	PNCK (ENSLAFG00000013695) #31	DUSP9 (ENSLAFG00000031085) #32	HAUS7 (ENSLAFG00000005743) #37	CCNQ (ENSLAFG00000029369) #33	ATP2B3 (ENSLAFG00000002208) #34	BGN (ENSLAFG00000002207) #35	TREX2 (ENSLAFG00000025805)
Tenrec	MODERN SPECIES	8343																L1CAM (ENSETEG00000014670) #22
Marsupialia	ANCESTRAL SPECIES	40			ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383.e #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.j.a	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.b ##25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.a.a #29	ENSGT00390000011863.c.b #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00950000183104.B.a.b.c.a.a.b
Marsupialia_b	ANCESTRAL SPECIES	37			ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b.g #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383.e #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.j.a	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.b ##25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.b #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00390000003937.c.a #37
Diprotodontia	ANCESTRAL SPECIES	81			ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b.g #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383.e #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.j.a	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a.g.b ##25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.b #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00390000003937.c.a #37
Diprotodontia_a	ANCESTRAL SPECIES	79			ENSGT00940000154471.a.a	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b.g #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383.e #17	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.j.a	ENSGT00950000182824.a.b.b #20	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992.a #24	ENSGT00950000182989.D.a.a.g.b ##25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c.b #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00940000164248 #36	ENSGT00950000183104.B.a.b.c.a.a.b	ENSGT00390000003937.c.a.a #37
koala	MODERN SPECIES	310			ENSPCIG00000016102	TKTL2 (ENSPCIG00000016101)	ENSPCIG00000016098 #12	ENSPCIG00000016043 #13	MECP2 (ENSPCIG00000016390) #14	IRAK1 (ENSPCIG00000016394) #15	TMEM187 (ENSPCIG00000016396) #16	HCFC1 (ENSPCIG00000016397) #17	RENBP (ENSPCIG00000016399) #18	NAA10 (ENSPCIG00000035783) #19	ENSPCIG00000037377	ARHGAP4 (ENSPCIG00000012250) #20	AVPR2 (ENSPCIG00000012251) #21	L1CAM (ENSPCIG00000003277) #22	PDZD4 (ENSPCIG00000016403) #23	ENSPCIG00000016404 #24	ENSPCIG00000016406 ##25	SRPK3 (ENSPCIG00000016407) #26	PLXNB3 (ENSPCIG00000016447) #27	ABCD1 (ENSPCIG00000017689) #28	BCAP31 (ENSPCIG00000017694) #29	ENSPCIG00000017698 #30	ENSPCIG00000017699 #31	DUSP9 (ENSPCIG00000017701) #32	ATP2B3 (ENSPCIG00000008574) #34	BGN (ENSPCIG00000016827) #35	ENSPCIG00000001499 #36	ENSPCIG00000010240	ENSPCIG00000033247 #37
Common wonbat	MODERN SPECIES	1157				ENSVURG00010021407	TKTL2 (ENSVURG00010021394)	ENSVURG00010021367 #13	ENSVURG00010021357 #14	IRAK1 (ENSVURG00010021347) #15	TMEM187 (ENSVURG00010021342) #16	ENSVURG00010021324 #17	RENBP (ENSVURG00010021310) #18	NAA10 (ENSVURG00010021302) #19	ENSVURG00010021294	ARHGAP4 (ENSVURG00010021281) #20	AVPR2 (ENSVURG00010021274) #21	L1CAM (ENSVURG00010021232) #22	PDZD4 (ENSVURG00010021202) #23	ENSVURG00010021186 #24	ENSVURG00010021172 ##25	SRPK3 (ENSVURG00010021162) #26	PLXNB3 (ENSVURG00010021147) #27	ABCD1 (ENSVURG00010021008) #28	BCAP31 (ENSVURG00010020986) #29	ENSVURG00010020979 #30	PNCK (ENSVURG00010020947) #31	DUSP9 (ENSVURG00010020940) #32	ATP2B3 (ENSVURG00010020897) #34
Wallaby	MODERN SPECIES	9985																L1CAM (ENSMEUG00000012380) #22
Tasmanian devil	MODERN SPECIES	21	ENSSHAG00000001048	ENSSHAG00000024012	ENSSHAG00000010291	ENSSHAG00000010031	ENSSHAG00000009316 #12	ENSSHAG00000009224 #13	MECP2 (ENSSHAG00000007851) #14	IRAK1 (ENSSHAG00000007531) #15	TMEM187 (ENSSHAG00000021524) #16	ENSSHAG00000006391 #17	RENBP (ENSSHAG00000006063) #18	NAA10 (ENSSHAG00000005952) #19	ARHGAP4 (ENSSHAG00000004979) #20	ENSSHAG00000005769	AVPR2 (ENSSHAG00000004862) #21	L1CAM (ENSSHAG00000003280) #22	PDZD4 (ENSSHAG00000000157) #23	SSR4 (ENSSHAG00000021208) #24	ENSSHAG00000001102 ##25	SRPK3 (ENSSHAG00000000037) #26	PLXNB3 (ENSSHAG00000009796) #27	ENSSHAG00000009362 #28	ENSSHAG00000009111 #29	ENSSHAG00000009030 #30	PNCK (ENSSHAG00000008570) #31	DUSP9 (ENSSHAG00000007865) #32	ATP2B3 (ENSSHAG00000005720) #34	BGN (ENSSHAG00000030752) #35	ENSSHAG00000001909 #36	ENSSHAG00000021114	ENSSHAG00000025093 #37
Opossum	MODERN SPECIES	627	ENSMODG00000005172	ENSMODG00000005162	ENSMODG00000021344	ENSMODG00000021343	ENSMODG00000036625	ENSMODG00000040739	RNF128 (ENSMODG00000002362)	TBC1D8B (ENSMODG00000002345)	CLDN2 (ENSMODG00000002246)	ENSMODG00000022844	ENSMODG00000050281	ENSMODG00000002278	DNAAF6 (ENSMODG00000002249)	ENSMODG00000047866	ENSMODG00000002236	L1CAM (ENSMODG00000008677) #22	PDZD4 (ENSMODG00000008596) #23	SSR4 (ENSMODG00000008581) #24	ENSMODG00000008568 ##25	SRPK3 (ENSMODG00000039232) #26	PLXNB3 (ENSMODG00000008407) #27	ABCD1 (ENSMODG00000008330) #28	BCAP31 (ENSMODG00000008300) #29	ENSMODG00000008271 #30	PNCK (ENSMODG00000008192) #31	DUSP9 (ENSMODG00000008174) #32	ATP2B3 (ENSMODG00000008152) #34	ENSMODG00000008043 #36	ENSMODG00000022847	ENSMODG00000007539 #37	ENSMODG00000050925
Platypus	MODERN SPECIES	17	ENSOANG00000011020	TKTL2 (ENSOANG00000045224)	ENSOANG00000045052 #12	OPN1LW (ENSOANG00000011023) #13	ENSOANG00000037077 ##13	ENSOANG00000040139 #14	IRAK1 (ENSOANG00000011027) #15	TMEM187 (ENSOANG00000016003) #16	HCFC1 (ENSOANG00000005871) #17	ENSOANG00000041748	RENBP (ENSOANG00000002892) #18	NAA10 (ENSOANG00000002893) #19	ARHGAP4 (ENSOANG00000005180) #20	ENSOANG00000005889	AVPR2 (ENSOANG00000005890) #21	L1CAM (ENSOANG00000009415) #22	PDZD4 (ENSOANG00000005181) #23	SSR4 (ENSOANG00000036977) #24	IDH3G (ENSOANG00000005183) #25	SRPK3 (ENSOANG00000005184) #26	PLXNB3 (ENSOANG00000005185) #27	ABCD1 (ENSOANG00000041560) #28	BCAP31 (ENSOANG00000010212) #29	ENSOANG00000010213 #30	PNCK (ENSOANG00000036709) #31	DUSP9 (ENSOANG00000005316) #32	CCNQ (ENSOANG00000000678) #33	ATP2B3 (ENSOANG00000000679) #34	BGN (ENSOANG00000000684) #35	ENSOANG00000029619 #36	TREX2 (ENSOANG00000000686)
Sauria	ANCESTRAL SPECIES	13	ENSGT00390000014874	ENSGT00940000158890	ENSGT00390000017740.a.b	ENSGT00940000153393.B	ENSGT00390000004064	ENSGT00940000155616	ENSGT00940000159835	ENSGT00390000014353	ENSGT00530000063557.a	ENSGT00950000182824.a.b.a ##20	ENSGT00390000011230	ENSGT01050000244882.a.a.b ##21	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00950000182989.D.a.a #25	ENSGT00940000157877.b #26	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00950000182955.a.b.a #28	ENSGT00390000011863.c #29	ENSGT00940000155869 #30	ENSGT00940000162187 #31	ENSGT00940000161880 #32	ENSGT00940000155445 #33	ENSGT00940000160765 #34	ENSGT00940000155311.C #35	ENSGT00390000003937 #37	ENSGT00940000163873.k
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a #28	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #26
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22
Laterata	ANCESTRAL SPECIES	7	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a #28	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #26
Common wall lizard	MODERN SPECIES	8	ENSPMRG00000021772 #13	ENSPMRG00000021757 ##13	MECP2 (ENSPMRG00000021754) #14	IRAK1 (ENSPMRG00000021661) #15	TMEM187 (ENSPMRG00000021643) #16	HCFC1 (ENSPMRG00000021629) #17	ENSPMRG00000021615	RENBP (ENSPMRG00000021609) #18	NAA10 (ENSPMRG00000021587) #19	ARHGAP4 (ENSPMRG00000021373) #20	CAV3 (ENSPMRG00000021320)	ENSPMRG00000021311	AVPR2 (ENSPMRG00000021305) #21	ENSPMRG00000021296	ENSPMRG00000021287	L1CAM (ENSPMRG00000021230) #22	PDZD4 (ENSPMRG00000021208) #23	SSR4 (ENSPMRG00000021193) #24	ENSPMRG00000021190	FLNA (ENSPMRG00000021086) #8	HAUS7 (ENSPMRG00000021057) #37	BGN (ENSPMRG00000021052) #35	ATP2B3 (ENSPMRG00000023951) #34	CCNQ (ENSPMRG00000023950) #33	DUSP9 (ENSPMRG00000023948) #32	PNCK (ENSPMRG00000023947) #31	ENSPMRG00000023946 #30	BCAP31 (ENSPMRG00000023945) #29	ABCD1 (ENSPMRG00000023944) #28	PLXNB3 (ENSPMRG00000023943) #27	SRPK3 (ENSPMRG00000023942) #26
Argentine black and white tegu	MODERN SPECIES	12	ENSSMRG00000000019 #13	ENSSMRG00000000831 ##13	MECP2 (ENSSMRG00000001840) #14	IRAK1 (ENSSMRG00000001848) #15	TMEM187 (ENSSMRG00000001862) #16	HCFC1 (ENSSMRG00000001871) #17	ENSSMRG00000002324	RENBP (ENSSMRG00000002327) #18	ENSSMRG00000002333	NAA10 (ENSSMRG00000002335) #19	ENSSMRG00000002344	ARHGAP4 (ENSSMRG00000002350) #20	CAV3 (ENSSMRG00000002372)	ENSSMRG00000002373	AVPR2 (ENSSMRG00000002377) #21	L1CAM (ENSSMRG00000002421) #22	PDZD4 (ENSSMRG00000002457) #23	FLNA (ENSSMRG00000002470) #8	HAUS7 (ENSSMRG00000002500) #37	ENSSMRG00000002504 #36	BGN (ENSSMRG00000002508) #35	ATP2B3 (ENSSMRG00000002530) #34	CCNQ (ENSSMRG00000002583) #33	DUSP9 (ENSSMRG00000002591) #32	PNCK (ENSSMRG00000002638) #31	ENSSMRG00000002650 #30	BCAP31 (ENSSMRG00000002653) #29	ABCD1 (ENSSMRG00000002654) #28	PLXNB3 (ENSSMRG00000002754) #27	SRPK3 (ENSSMRG00000002758) #26	IDH3G (ENSSMRG00000002761) #25
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a #28	ENSGT01020000230394.e.a.a.b.a.b #27	ENSGT00940000157877.b #26
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	21	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196.b	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506.a #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a #28	ENSGT01020000230394.e.a.a.b.a.b.b #27	ENSGT00940000157877.b #26
Indian cobra	MODERN SPECIES	1	TEX28 (ENSNNAG00000018735) #12	ENSNNAG00000018726 #13	MECP2 (ENSNNAG00000018722) #14	ENSNNAG00000018716	IRAK1 (ENSNNAG00000018710) #15	TMEM187 (ENSNNAG00000018708) #16	HCFC1 (ENSNNAG00000018698) #17	ENSNNAG00000018693	RENBP (ENSNNAG00000018689) #18	NAA10 (ENSNNAG00000018684) #19	ENSNNAG00000018680	ARHGAP4 (ENSNNAG00000018669) #20	CAV3 (ENSNNAG00000018661)	ENSNNAG00000018657	AVPR2 (ENSNNAG00000018655) #21	L1CAM (ENSNNAG00000018628) #22	ENSNNAG00000018620 #23	ENSNNAG00000018618	ENSNNAG00000018610 #23	SSR4 (ENSNNAG00000018601) #24	ENSNNAG00000018599	FLNA (ENSNNAG00000010196) #8	HAUS7 (ENSNNAG00000008940) #37	BGN (ENSNNAG00000008914) #35	ATP2B3 (ENSNNAG00000007314) #34	CCNQ (ENSNNAG00000007203) #33	DUSP9 (ENSNNAG00000007195) #32	PNCK (ENSNNAG00000007117) #31	ENSNNAG00000004889 #30	BCAP31 (ENSNNAG00000004742) #29	ABCD1 (ENSNNAG00000004643) #28
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196.a	ENSGT00940000166196.b	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506.a #22	ENSGT00940000157506.b #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a.f #28	ENSGT00950000182955.a.b.a.e #28
Blue-lipped sea krait	MODERN SPECIES	5921																ENSLLTG00000008796 #22
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00940000161969	ENSGT00940000162843 #12	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196.b	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506.a #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a.f #28	ENSGT00950000182955.a.b.a.e #28	ENSGT01020000230394.e.a.a.b.a.b.b #27
Eastern brown snake	MODERN SPECIES	52	TKTL2 (ENSPTXG00000004942)	TEX28 (ENSPTXG00000004943) #12	ENSPTXG00000004945 #13	MECP2 (ENSPTXG00000004947) #14	IRAK1 (ENSPTXG00000004949) #15	TMEM187 (ENSPTXG00000004952) #16	HCFC1 (ENSPTXG00000004954) #17	ENSPTXG00000004957	RENBP (ENSPTXG00000004959) #18	NAA10 (ENSPTXG00000004961) #19	ENSPTXG00000004963	ARHGAP4 (ENSPTXG00000004965) #20	CAV3 (ENSPTXG00000004995)	ENSPTXG00000004997	AVPR2 (ENSPTXG00000004998) #21	L1CAM (ENSPTXG00000004999) #22	PDZD4 (ENSPTXG00000005007) #23	SSR4 (ENSPTXG00000005008) #24	FLNA (ENSPTXG00000005011) #8	HAUS7 (ENSPTXG00000005012) #37	BGN (ENSPTXG00000005013) #35	ATP2B3 (ENSPTXG00000005014) #34	CCNQ (ENSPTXG00000005700) #33	DUSP9 (ENSPTXG00000005701) #32	PNCK (ENSPTXG00000005709) #31	ENSPTXG00000005710 #30	BCAP31 (ENSPTXG00000005711) #29	ENSPTXG00000005712 #28	ENSPTXG00000005713 #28	PLXNB3 (ENSPTXG00000005731) #27	SRPK3 (ENSPTXG00000007997) #26
Mainland tiger snake	MODERN SPECIES	81	TKTL2 (ENSNSUG00000014895)	TEX28 (ENSNSUG00000014905) #12	ENSNSUG00000014906 #13	MECP2 (ENSNSUG00000014916) #14	IRAK1 (ENSNSUG00000014917) #15	TMEM187 (ENSNSUG00000014918) #16	HCFC1 (ENSNSUG00000014919) #17	ENSNSUG00000014940	RENBP (ENSNSUG00000014941) #18	NAA10 (ENSNSUG00000014942) #19	ENSNSUG00000014943	ARHGAP4 (ENSNSUG00000014999) #20	CAV3 (ENSNSUG00000015005)	ENSNSUG00000015006	AVPR2 (ENSNSUG00000015007) #21	L1CAM (ENSNSUG00000015009) #22	PDZD4 (ENSNSUG00000015010) #23	SSR4 (ENSNSUG00000015011) #24	FLNA (ENSNSUG00000015014) #8	HAUS7 (ENSNSUG00000015675) #37	ENSNSUG00000015676 #36	BGN (ENSNSUG00000015677) #35	ATP2B3 (ENSNSUG00000015687) #34	CCNQ (ENSNSUG00000015690) #33	DUSP9 (ENSNSUG00000015691) #32	PNCK (ENSNSUG00000015692) #31	ENSNSUG00000015693 #30	ENSNSUG00000015694 #30	BCAP31 (ENSNSUG00000015695) #29	ENSNSUG00000015696 #28	ENSNSUG00000015697 #28
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000157506.b #22
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT01030000234549.a.a.a.b #13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00940000166196.a	ENSGT00940000166196.b	ENSGT00390000013740 #18	ENSGT00550000074803 #19	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b #20	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.b	ENSGT01050000244882.b.c.b #21	ENSGT00940000157506.a #22	ENSGT00940000157506.b #22	ENSGT00950000183062.a.b #23	ENSGT00390000008992 #24	ENSGT00940000153588.b #8	ENSGT00390000003937 #37	ENSGT00940000164248 #36	ENSGT00940000155311.C #35	ENSGT00940000160765 #34	ENSGT00940000155445 #33	ENSGT00940000161880 #32	ENSGT00940000162187 #31	ENSGT00940000155869 #30	ENSGT00390000011863.c #29	ENSGT00950000182955.a.b.a.f #28	ENSGT00950000182955.a.b.a.e #28	ENSGT01020000230394.e.a.a.b.a.b.b #27
Blue-lipped sea krait	MODERN SPECIES	4491																ENSLLTG00000013254 #22	PDZD4 (ENSLLTG00000013257) #23	SSR4 (ENSLLTG00000013262) #24
Lizard	MODERN SPECIES	1	ENSACAG00000012605 #13	ENSACAG00000012537 ##13	MECP2 (ENSACAG00000012519) #14	ENSACAG00000041142	IRAK1 (ENSACAG00000012475) #15	TMEM187 (ENSACAG00000012472) #16	HCFC1 (ENSACAG00000012364) #17	ENSACAG00000012345	RENBP (ENSACAG00000012283) #18	NAA10 (ENSACAG00000012233) #19	ENSACAG00000012219	ARHGAP4 (ENSACAG00000011924) #20	CAV3 (ENSACAG00000040122)	ENSACAG00000011878	AVPR2 (ENSACAG00000021016) #21	L1CAM (ENSACAG00000011487) #22	ENSACAG00000040437	PDZD4 (ENSACAG00000036143) #23	SSR4 (ENSACAG00000011328) #24	ENSACAG00000009800 #8	HAUS7 (ENSACAG00000009779) #37	BGN (ENSACAG00000009615) #35	ATP2B3 (ENSACAG00000009210) #34	CCNQ (ENSACAG00000009190) #33	DUSP9 (ENSACAG00000009178) #32	ENSACAG00000044476	PNCK (ENSACAG00000008973) #31	ENSACAG00000008691 #30	ENSACAG00000045378	BCAP31 (ENSACAG00000008629) #29	ABCD1 (ENSACAG00000008539) #28
Archelosauria	ANCESTRAL SPECIES	69												ENSGT00950000182955.a.b.a #28	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00940000154471.a.a	ENSGT01060000248768	ENSGT00940000161969	ENSGT01030000234549.a.a.a.b #13	ENSGT01030000234549.a.a.a.a.a.a ##13	ENSGT00530000063687.b.b.b #14	ENSGT00940000160502 #15	ENSGT00390000011272 #16	ENSGT00940000161383 #17	ENSGT00390000013740 #18
Archosauria	ANCESTRAL SPECIES	107													ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23
Aves	ANCESTRAL SPECIES	107													ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23
Neognathae	ANCESTRAL SPECIES	81													ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23
Neognathae_b	ANCESTRAL SPECIES	62											ENSGT00530000063715.b	ENSGT00940000158963	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000003897.t	ENSGT00940000153588.b #8
Neognathae_c	ANCESTRAL SPECIES	60											ENSGT00530000063715.b	ENSGT00940000158963	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22	ENSGT00950000183062.a.b #23	ENSGT00390000003897.t
Kakapo	MODERN SPECIES	27	ENSSHBG00005008057	GATA1 (ENSSHBG00005008065)	ENSSHBG00005008000	ENSSHBG00005007974	UBL4A (ENSSHBG00005007963)	ENSSHBG00005007944	ATP6AP1 (ENSSHBG00005007878)	SYP (ENSSHBG00005007854)	MECP2 (ENSSHBG00005007709) #14	CCDC120 (ENSSHBG00005007693)	ENSSHBG00005007668	OTUD5 (ENSSHBG00005007642)	SRPK3 (ENSSHBG00005007575) #26	IDH3G (ENSSHBG00005007512) #25	SSR4 (ENSSHBG00005007493) #24	L1CAM (ENSSHBG00005007471) #22	PDZD4 (ENSSHBG00005007435) #23	ENSSHBG00005007409	GRIPAP1 (ENSSHBG00005007370)	WAS (ENSSHBG00005007327)	ENSSHBG00005007307
Passeriformes	ANCESTRAL SPECIES	103												ENSGT00940000158963	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22
Passeriformes_d	ANCESTRAL SPECIES	99												ENSGT00940000158963	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22
Passeriformes_g	ANCESTRAL SPECIES	108												ENSGT00940000158963	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22
Passeroidea	ANCESTRAL SPECIES	113												ENSGT00940000158963	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22
Zebra finch	MODERN SPECIES	38	UBA1 (ENSTGUG00000020872)	ENSTGUG00000029102	ENSTGUG00000027947	ENSTGUG00000019736	ENSTGUG00000027775	ENSTGUG00000022259	ENSTGUG00000022796	ENSTGUG00000020951	ENSTGUG00000019568	ENSTGUG00000029601	ENSTGUG00000025634	OTUD5 (ENSTGUG00000025602)	SRPK3 (ENSTGUG00000021949) #26	ENSTGUG00000026718 #25	ENSTGUG00000025286 #24	ENSTGUG00000023368 #22	ENSTGUG00000029033	ENSTGUG00000024305	ENSTGUG00000026390 ##8	ENSTGUG00000022784	LWS (ENSTGUG00000020605) #13	SWS2 (ENSTGUG00000026520) ##13	ENSTGUG00000023188 #33	ENSTGUG00000025859 #14	ENSTGUG00000019253 #17	ENSTGUG00000019525 #18	ENSTGUG00000019880 #18	ENSTGUG00000023057	ENSTGUG00000020650 #29	ENSTGUG00000020916	ENSTGUG00000023010
Cryptodira	ANCESTRAL SPECIES	136												ENSGT00950000182955.a.b.a #28	ENSGT00940000157877.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506 #22
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	111												ENSGT00950000182955.a.b.a #28	ENSGT00940000157877.b.b #26	ENSGT00950000182989.D.a.a #25	ENSGT00390000008992 #24	ENSGT00940000157506.c #22
Testudinidae	ANCESTRAL SPECIES	171														ENSGT00950000182989.D.a.a #25	ENSGT00390000008992.l #24	ENSGT00940000157506.c #22
Abingdon island giant tortoise	MODERN SPECIES	1769																ENSCABG00000002849 #22
Goode s thornscrub tortoise	MODERN SPECIES	194		ENSGEVG00005016786 #37	DUSP9 (ENSGEVG00005016821) #32	CCNQ (ENSGEVG00005016840) #33	ATP2B3 (ENSGEVG00005016987) #34	BGN (ENSGEVG00005017820) #35	ENSGEVG00005017852	ENSGEVG00005017874	TKTL2 (ENSGEVG00005017921)	ENSGEVG00005018118 #13	MECP2 (ENSGEVG00005018139) #14	IRAK1 (ENSGEVG00005018287) #15	TMEM187 (ENSGEVG00005019030) #16	IDH3G (ENSGEVG00005019054) #25	ENSGEVG00005019065 #24	L1CAM (ENSGEVG00005019079) #22
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000157506.c #22
painted turtle	MODERN SPECIES	1100	FAM3A (ENSCPBG00000017182)	UBL4A (ENSCPBG00000017185)	ENSCPBG00000017187	ENSCPBG00000017191	ENSCPBG00000017205	G6PD (ENSCPBG00000017207)	IKBKG (ENSCPBG00000017209)	SEPHS2 (ENSCPBG00000017210)	ENSCPBG00000017211	ENSCPBG00000017213 #30	ENSCPBG00000017215	ENSCPBG00000017216 #28	ENSCPBG00000017217 #26	ENSCPBG00000017218 #26	IDH3G (ENSCPBG00000017224) #25	L1CAM (ENSCPBG00000017650) #22
Three-toed box turtle	MODERN SPECIES	3139																ENSTMTG00000013754 #22
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000157506.d #22
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000157506.d #22
Three-toed box turtle	MODERN SPECIES	3140																ENSTMTG00000013766 #22