Muroidea	ANCESTRAL SPECIES		ENSGT01030000234760 #9	ENSGT00940000158479 #10	ENSGT00940000156339 #11	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a #31	ENSGT00940000165476	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879	ENSGT00520000060616 #34	ENSGT00390000016675 #35	ENSGT00940000153818.a.b.a.b #36
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000156339 #11	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879	ENSGT00520000060616 #34	ENSGT00390000016675 #35	ENSGT00940000153818.a.b.a.b #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.g	ENSGT00530000064879.h	ENSGT00520000060616 #34	ENSGT00390000016675 #35
Mus	ANCESTRAL SPECIES	2	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.g	ENSGT00530000064879.h	ENSGT00520000060616 #34	ENSGT00390000016675 #35
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0017987 #7	MGP_PahariEiJ_G0017988 #8	Ccl1 (MGP_PahariEiJ_G0017989) #9	Tmem132e (MGP_PahariEiJ_G0017990) #10	Cct6b (MGP_PahariEiJ_G0017991) #11	Zfp830 (MGP_PahariEiJ_G0017992) #12	Lig3 (MGP_PahariEiJ_G0017993) #13	Rffl (MGP_PahariEiJ_G0017994) #14	Rad51d (MGP_PahariEiJ_G0017995) #15	Fndc8 (MGP_PahariEiJ_G0017996) #16	Nle1 (MGP_PahariEiJ_G0017997) #17	Unc45b (MGP_PahariEiJ_G0017998) #18	Slfn5 (MGP_PahariEiJ_G0017999) #19	Slfn14 (MGP_PahariEiJ_G0018000) #20	Pex12 (MGP_PahariEiJ_G0018001) #21	Ap2b1 (MGP_PahariEiJ_G0018002) #22	Rasl10b (MGP_PahariEiJ_G0018003) #23	Gas2l2 (MGP_PahariEiJ_G0018004) #24	1700020L24Rik (MGP_PahariEiJ_G0018005) #25	Mmp28 (MGP_PahariEiJ_G0018006) #26	Taf15 (MGP_PahariEiJ_G0018007) #27	Heatr9 (MGP_PahariEiJ_G0018008) #28	Ccl5 (MGP_PahariEiJ_G0018009) #29	Ccl9 (MGP_PahariEiJ_G0018010) #30	Ccl6 (MGP_PahariEiJ_G0018011) #31	Ccl3 (MGP_PahariEiJ_G0018012) #32	Ccl4 (MGP_PahariEiJ_G0018013) #33	Wfdc21 (MGP_PahariEiJ_G0018015) #34	Heatr6 (MGP_PahariEiJ_G0018016) #35	Hnf1b (MGP_PahariEiJ_G0018017) #36	Ddx52 (MGP_PahariEiJ_G0018018) #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b.a ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.g.c	ENSGT00530000064879.h	ENSGT00520000060616 #34	ENSGT00390000016675 #35
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b.b ##20	ENSGT00410000025651.A.b.a.a.b.e.b.a ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.g.c	ENSGT00530000064879.h	ENSGT00520000060616 #34	ENSGT00390000016675 #35
Mouse	MODERN SPECIES	2	Lig3 (ENSMUSG00000020697) #13	Rffl (ENSMUSG00000020696) #14	Rad51d (ENSMUSG00000018841) #15	Fndc8 (ENSMUSG00000018844) #16	Nle1 (ENSMUSG00000020692) #17	Unc45b (ENSMUSG00000018845) #18	Slfn5 (ENSMUSG00000054404) #19	Slfn9 (ENSMUSG00000069793) ##20	Slfn8 (ENSMUSG00000035208) ##20	Slfn2 (ENSMUSG00000072620) ##20	Slfn1 (ENSMUSG00000078763) ##20	Slfn4 (ENSMUSG00000000204) ##20	Slfn3 (ENSMUSG00000018986) ##20	Slfn14 (ENSMUSG00000082101) #20	Pex12 (ENSMUSG00000018733) #21	Ap2b1 (ENSMUSG00000035152) #22	Rasl10b (ENSMUSG00000020684) #23	Gas2l2 (ENSMUSG00000020686) #24	1700020L24Rik (ENSMUSG00000035085) #25	Mmp28 (ENSMUSG00000020682) #26	Taf15 (ENSMUSG00000020680) #27	Heatr9 (ENSMUSG00000018925) #28	Ccl5 (ENSMUSG00000035042) #29	Ccl9 (ENSMUSG00000019122) #30	Ccl6 (ENSMUSG00000018927) #31	Ccl3 (ENSMUSG00000000982) #32	Ccl4 (ENSMUSG00000018930) #33	Wfdc17 (ENSMUSG00000069792)	Wfdc18 (ENSMUSG00000000983)	Wfdc21 (ENSMUSG00000051748) #34	Heatr6 (ENSMUSG00000000976) #35
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00950000185966	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b.a ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.g.c	ENSGT00530000064879.h	ENSGT00520000060616 #34	ENSGT00390000016675 #35
Steppe mouse	MODERN SPECIES	3305													ENSMSIG00000012844 ##20	Slfn14 (ENSMSIG00000012821) #20	Pex12 (ENSMSIG00000012790) #21	Ap2b1 (ENSMSIG00000012708) #22	Rasl10b (ENSMSIG00000012687) #23	Gas2l2 (ENSMSIG00000012668) #24	1700020L24Rik (ENSMSIG00000012643) #25	Mmp28 (ENSMSIG00000012526) #26	Taf15 (ENSMSIG00000012461) #27	Heatr9 (ENSMSIG00000012418) #28	Ccl5 (ENSMSIG00000012408) #29	Ccl9 (ENSMSIG00000012396) #30	Ccl6 (ENSMSIG00000012387) #31	Ccl3 (ENSMSIG00000012367) #32	Ccl4 (ENSMSIG00000012352) #33	ENSMSIG00000012344	ENSMSIG00000012332	ENSMSIG00000012323	Wfdc17 (ENSMSIG00000012316)
spretus	MODERN SPECIES	2	Lig3 (MGP_SPRETEiJ_G0017700) #13	Rffl (MGP_SPRETEiJ_G0017701) #14	Rad51d (MGP_SPRETEiJ_G0017702) #15	Fndc8 (MGP_SPRETEiJ_G0017703) #16	Nle1 (MGP_SPRETEiJ_G0017704) #17	Unc45b (MGP_SPRETEiJ_G0017705) #18	Slfn5 (MGP_SPRETEiJ_G0017706) #19	MGP_SPRETEiJ_G0017707 ##20	MGP_SPRETEiJ_G0017708 ##20	Slfn2 (MGP_SPRETEiJ_G0017709) ##20	Slfn1 (MGP_SPRETEiJ_G0017710) ##20	MGP_SPRETEiJ_G0017711 ##20	MGP_SPRETEiJ_G0017712 ##20	Slfn14 (MGP_SPRETEiJ_G0017713) #20	Pex12 (MGP_SPRETEiJ_G0017714) #21	Ap2b1 (MGP_SPRETEiJ_G0017715) #22	Rasl10b (MGP_SPRETEiJ_G0017716) #23	Gas2l2 (MGP_SPRETEiJ_G0017717) #24	1700020L24Rik (MGP_SPRETEiJ_G0017718) #25	Mmp28 (MGP_SPRETEiJ_G0017719) #26	Taf15 (MGP_SPRETEiJ_G0017720) #27	Heatr9 (MGP_SPRETEiJ_G0017721) #28	Ccl5 (MGP_SPRETEiJ_G0017722) #29	Ccl9 (MGP_SPRETEiJ_G0017723) #30	Ccl6 (MGP_SPRETEiJ_G0017724) #31	MGP_SPRETEiJ_G0017725	Ccl3 (MGP_SPRETEiJ_G0017726) #32	Ccl4 (MGP_SPRETEiJ_G0017727) #33	Wfdc17 (MGP_SPRETEiJ_G0017728)	Wfdc18 (MGP_SPRETEiJ_G0017729)	Wfdc21 (MGP_SPRETEiJ_G0017730) #34
Ryukyu mouse	MODERN SPECIES	2	Lig3 (MGP_CAROLIEiJ_G0016856) #13	Rffl (MGP_CAROLIEiJ_G0016857) #14	Rad51d (MGP_CAROLIEiJ_G0016858) #15	Fndc8 (MGP_CAROLIEiJ_G0016859) #16	Nle1 (MGP_CAROLIEiJ_G0016860) #17	Unc45b (MGP_CAROLIEiJ_G0016861) #18	MGP_CAROLIEiJ_G0016862 #19	MGP_CAROLIEiJ_G0016863 ##20	MGP_CAROLIEiJ_G0016864 ##20	Slfn2 (MGP_CAROLIEiJ_G0016865) ##20	Slfn1 (MGP_CAROLIEiJ_G0016866) ##20	MGP_CAROLIEiJ_G0016867 ##20	MGP_CAROLIEiJ_G0016868 ##20	Slfn14 (MGP_CAROLIEiJ_G0016869) #20	Pex12 (MGP_CAROLIEiJ_G0016870) #21	Ap2b1 (MGP_CAROLIEiJ_G0016871) #22	Rasl10b (MGP_CAROLIEiJ_G0016872) #23	Gas2l2 (MGP_CAROLIEiJ_G0016873) #24	1700020L24Rik (MGP_CAROLIEiJ_G0016874) #25	Mmp28 (MGP_CAROLIEiJ_G0016875) #26	Taf15 (MGP_CAROLIEiJ_G0016876) #27	Heatr9 (MGP_CAROLIEiJ_G0016877) #28	Ccl5 (MGP_CAROLIEiJ_G0016878) #29	Ccl9 (MGP_CAROLIEiJ_G0016879) #30	Ccl6 (MGP_CAROLIEiJ_G0016880) #31	Ccl3 (MGP_CAROLIEiJ_G0016881) #32	Ccl4 (MGP_CAROLIEiJ_G0016882) #33	Wfdc17 (MGP_CAROLIEiJ_G0016883)	Wfdc18 (MGP_CAROLIEiJ_G0016884)	Wfdc21 (MGP_CAROLIEiJ_G0016885) #34	Heatr6 (MGP_CAROLIEiJ_G0016886) #35
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES	8	ENSRNOG00000065594	Nrsn1 (ENSRNOG00000017444)	Dcdc2 (ENSRNOG00000017511)	Mrs2 (ENSRNOG00000017545)	Gpld1 (ENSRNOG00000017702)	Aldh5a1 (ENSRNOG00000023538)	RGD1307443 (ENSRNOG00000018141)	Rpl37-ps1 (ENSRNOG00000063362)	Tdp2 (ENSRNOG00000018246)	Acot13 (ENSRNOG00000018415)	C17h6orf62-ps1 (ENSRNOG00000018456)	Gmnn (ENSRNOG00000018782)	Armh2 (ENSRNOG00000064812)	Ripor2 (ENSRNOG00000018804)	Cmahp (ENSRNOG00000003094)	ENSRNOG00000067245 #22	ENSRNOG00000064118 #22	Carmil1 (ENSRNOG00000016576)	Scgn (ENSRNOG00000016628)	H2ac1 (ENSRNOG00000065352)	H2bc1 (ENSRNOG00000069905)	Slc17a4 (ENSRNOG00000022505)	AABR07027750.1 (ENSRNOG00000042692)	Slc17a3 (ENSRNOG00000032745)	Slc17a2 (ENSRNOG00000017180)	H1f1 (ENSRNOG00000017175)	Hist1h3b (ENSRNOG00000068614)	Hist1h4m (ENSRNOG00000065263)	LOC102549173 (ENSRNOG00000066835)	H3c13 (ENSRNOG00000065054)	Hist1h2af (ENSRNOG00000022146)
Rat	MODERN SPECIES	8	Nrsn1 (ENSRNOG00000017444)	Dcdc2 (ENSRNOG00000017511)	Mrs2 (ENSRNOG00000017545)	Gpld1 (ENSRNOG00000017702)	Aldh5a1 (ENSRNOG00000023538)	RGD1307443 (ENSRNOG00000018141)	Rpl37-ps1 (ENSRNOG00000063362)	Tdp2 (ENSRNOG00000018246)	Acot13 (ENSRNOG00000018415)	C17h6orf62-ps1 (ENSRNOG00000018456)	Gmnn (ENSRNOG00000018782)	Armh2 (ENSRNOG00000064812)	Ripor2 (ENSRNOG00000018804)	Cmahp (ENSRNOG00000003094)	ENSRNOG00000067245 #22	ENSRNOG00000064118 #22	Carmil1 (ENSRNOG00000016576)	Scgn (ENSRNOG00000016628)	H2ac1 (ENSRNOG00000065352)	H2bc1 (ENSRNOG00000069905)	Slc17a4 (ENSRNOG00000022505)	AABR07027750.1 (ENSRNOG00000042692)	Slc17a3 (ENSRNOG00000032745)	Slc17a2 (ENSRNOG00000017180)	H1f1 (ENSRNOG00000017175)	Hist1h3b (ENSRNOG00000068614)	Hist1h4m (ENSRNOG00000065263)	LOC102549173 (ENSRNOG00000066835)	H3c13 (ENSRNOG00000065054)	Hist1h2af (ENSRNOG00000022146)	H1f2 (ENSRNOG00000067441)
Rat	DUPLICATION
Rat	MODERN SPECIES	1	Unc45b (ENSRNOG00000009466) #18	ENSRNOG00000062443	Slfn5 (ENSRNOG00000021719) #19	Slfn13 (ENSRNOG00000021412) ##20	ENSRNOG00000063847	LOC108352183 (ENSRNOG00000037114)	Slfn2 (ENSRNOG00000037113) ##20	Slfn1 (ENSRNOG00000048053) ##20	Slfn4 (ENSRNOG00000057092)	Slfn4 (ENSRNOG00000063541) ##20	LOC688925 (ENSRNOG00000032135)	AC118772.2 (ENSRNOG00000021357) ##20	ENSRNOG00000062983 ##20	AC118772.1 (ENSRNOG00000009709) #20	Pex12 (ENSRNOG00000009718) #21	Ap2b1 (ENSRNOG00000061543) #22	Rasl10b (ENSRNOG00000010302) #23	Gas2l2 (ENSRNOG00000047546) #24	LOC689039 (ENSRNOG00000049757) #25	Mmp28 (ENSRNOG00000047940) #26	Taf15 (ENSRNOG00000058393) #27	Heatr9 (ENSRNOG00000037100) #28	Ccl5 (ENSRNOG00000010906)	Ccl9 (ENSRNOG00000028548) #30	Ccl6 (ENSRNOG00000030021)	Ccl3 (ENSRNOG00000011205) #32	Ccl4 (ENSRNOG00000011406) #33	ENSRNOG00000070672	LOC103695128 (ENSRNOG00000051084)	LOC100909660 (ENSRNOG00000066869)	ENSRNOG00000066744
Rat	MODERN SPECIES		ENSRNOG00000066169	ENSRNOG00000068667	Zfp273l-ps1 (ENSRNOG00000046353)	LOC102551340 (ENSRNOG00000047145)	Spry3-ps1 (ENSRNOG00000064505)	Zfp748 (ENSRNOG00000069921)	LOC102549842 (ENSRNOG00000049259)	LOC102547287 (ENSRNOG00000016462)	RGD1566325 (ENSRNOG00000017963)	ENSRNOG00000068953	Zfp455l1 (ENSRNOG00000042308)	Mtrr (ENSRNOG00000017826)	Fastkd3 (ENSRNOG00000027422)	Cfap90 (ENSRNOG00000047406)	Adcy2 (ENSRNOG00000032150)	Ap2b1-ps1 (ENSRNOG00000017678) #22	Tent4a (ENSRNOG00000017613)	Srd5a1 (ENSRNOG00000017601)	Nsun2 (ENSRNOG00000017254)	Ube2ql1 (ENSRNOG00000034075)	Med10 (ENSRNOG00000017150)	Dlat-ps1 (ENSRNOG00000017095)	Ice1 (ENSRNOG00000023053)	Adamts16 (ENSRNOG00000016812)	Irx1 (ENSRNOG00000033609)	Irx2 (ENSRNOG00000012742)	Irx4 (ENSRNOG00000012720)	Ndufs6l1 (ENSRNOG00000062531)	Mrpl36 (ENSRNOG00000023407)	Lpcat1 (ENSRNOG00000017930)	Slc6a3 (ENSRNOG00000017302)
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000156339 #11	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.e	ENSGT00520000060616 #34	ENSGT00390000016675 #35	ENSGT00940000153818.a.b.a.b #36
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000158479 #10	ENSGT00940000156339 #11	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT01100000263482.C.c.b.a.b.a.m #30	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.e	ENSGT00520000060616 #34	ENSGT00390000016675 #35	ENSGT00940000153818.a.b.a.b #36
Northern American deer mouse	MODERN SPECIES	21	Tmem132e (ENSPEMG00000016046) #10	Cct6b (ENSPEMG00000022000) #11	Zfp830 (ENSPEMG00000024107) #12	Lig3 (ENSPEMG00000021826) #13	Rffl (ENSPEMG00000023690) #14	Rad51d (ENSPEMG00000022893) #15	Fndc8 (ENSPEMG00000012327) #16	Nle1 (ENSPEMG00000023993) #17	Unc45b (ENSPEMG00000008983) #18	Slfn5 (ENSPEMG00000021448) #19	Slfn9 (ENSPEMG00000010005) ##20	ENSPEMG00000024894	ENSPEMG00000010010	Slfn14 (ENSPEMG00000012902) #20	Pex12 (ENSPEMG00000030925) #21	Ap2b1 (ENSPEMG00000018294) #22	Rasl10b (ENSPEMG00000027697) #23	Gas2l2 (ENSPEMG00000018233) #24	1700020L24Rik (ENSPEMG00000013417) #25	Mmp28 (ENSPEMG00000019080) #26	Taf15 (ENSPEMG00000018715) #27	Heatr9 (ENSPEMG00000009167) #28	Ccl5 (ENSPEMG00000008561) #29	Ccl9 (ENSPEMG00000028232) #30	Ccl6 (ENSPEMG00000008169) #31	Ccl3 (ENSPEMG00000028000) #32	ENSPEMG00000030825 #33	ENSPEMG00000026681	ENSPEMG00000027305 #33	ENSPEMG00000025016 #33	ENSPEMG00000028019 #33
Prairie vole	MODERN SPECIES	15	Tmem132e (ENSMOCG00000017883) #10	Cct6b (ENSMOCG00000015382) #11	Zfp830 (ENSMOCG00000002661) #12	Lig3 (ENSMOCG00000013887) #13	Rffl (ENSMOCG00000005235) #14	Rad51d (ENSMOCG00000019246) #15	Fndc8 (ENSMOCG00000016181) #16	Nle1 (ENSMOCG00000005383) #17	Unc45b (ENSMOCG00000016526) #18	Slfn5 (ENSMOCG00000010517) #19	ENSMOCG00000018543 ##20	Slfn2 (ENSMOCG00000021779) ##20	Slfn1 (ENSMOCG00000005408) ##20	Slfn14 (ENSMOCG00000008378) #20	Pex12 (ENSMOCG00000016233) #21	Ap2b1 (ENSMOCG00000014475) #22	Rasl10b (ENSMOCG00000001964) #23	Gas2l2 (ENSMOCG00000005581) #24	1700020L24Rik (ENSMOCG00000019897) #25	Mmp28 (ENSMOCG00000018460) #26	Taf15 (ENSMOCG00000015121) #27	Heatr9 (ENSMOCG00000009616) #28	Ccl5 (ENSMOCG00000020386) #29	ENSMOCG00000002418	ENSMOCG00000012772	ENSMOCG00000013583 #32	Ccl4 (ENSMOCG00000012149) #33	ENSMOCG00000013687	ENSMOCG00000016372	Wfdc21 (ENSMOCG00000019007) #34	Heatr6 (ENSMOCG00000015431) #35
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000156339 #11	ENSGT00390000012151 #12	ENSGT00940000156492 #13	ENSGT00390000012719.a #14	ENSGT00940000159095 #15	ENSGT00390000006458 #16	ENSGT00940000157881 #17	ENSGT00940000157654 #18	ENSGT00410000025651.A.b.a.a.a.b #19	ENSGT00410000025651.A.b.a.a.a.a ##20	ENSGT00410000025651.A.b.a.a.b.e.a ##20	ENSGT00410000025651.A.b.a.a.b.f ##20	ENSGT00410000025651.A.b.a.a.b.e.b ##20	ENSGT00410000025651.A.b.b #20	ENSGT00390000016209 #21	ENSGT00940000155206.d #22	ENSGT00940000160764 #23	ENSGT00940000162866 #24	ENSGT00390000007830 #25	ENSGT00940000159596 #26	ENSGT00940000156438 #27	ENSGT00390000007247 #28	ENSGT01100000263482.D #29	ENSGT00940000165476.d	ENSGT00940000165476.c	ENSGT01100000263482.C.c.b.a.b.a.n #31	ENSGT01100000263482.C.c.b.b.a.b #32	ENSGT01100000263482.C.c.a #33	ENSGT00530000064879.e	ENSGT00530000064879.f	ENSGT00520000060616 #34
Golden Hamster	MODERN SPECIES	684	ENSMAUG00000013646 ##33	Tmem132e (ENSMAUG00000016009) #10	Cct6b (ENSMAUG00000001673) #11	Zfp830 (ENSMAUG00000012194) #12	Lig3 (ENSMAUG00000020082) #13	Rffl (ENSMAUG00000003967) #14	Rad51d (ENSMAUG00000009497) #15	Fndc8 (ENSMAUG00000016080) #16	Nle1 (ENSMAUG00000016623) #17	Unc45b (ENSMAUG00000011322) #18	ENSMAUG00000009126 #19	Slfn9 (ENSMAUG00000013430) ##20	Slfn1 (ENSMAUG00000003013) ##20	Slfn14 (ENSMAUG00000020439) #20	Pex12 (ENSMAUG00000004768) #21	Ap2b1 (ENSMAUG00000021295) #22	Rasl10b (ENSMAUG00000011536) #23	Gas2l2 (ENSMAUG00000001264) #24	ENSMAUG00000018386 #27	Heatr9 (ENSMAUG00000019408) #28	Ccl5 (ENSMAUG00000000781) #29	ENSMAUG00000021412	ENSMAUG00000015635	Ccl3 (ENSMAUG00000021167) #32	Ccl4 (ENSMAUG00000020742) #33	ENSMAUG00000009975	Wfdc21 (ENSMAUG00000018673) #34	Heatr6 (ENSMAUG00000009627) #35	Hnf1b (ENSMAUG00000009573) #36	ENSMAUG00000007943	Ddx52 (ENSMAUG00000021084) #37
Chinese hamster chok1gshd	MODERN SPECIES	33	Cct6b (ENSCGRG00001020850) #11	Zfp830 (ENSCGRG00001003631) #12	Lig3 (ENSCGRG00001004370) #13	Rffl (ENSCGRG00001019316) #14	Rad51d (ENSCGRG00001012167) #15	Fndc8 (ENSCGRG00001013060) #16	Nle1 (ENSCGRG00001009877) #17	Unc45b (ENSCGRG00001022400) #18	Slfn5 (ENSCGRG00001016905) #19	Slfn9 (ENSCGRG00001021962) ##20	Slfn2 (ENSCGRG00001022663) ##20	Slfn1 (ENSCGRG00001009249) ##20	ENSCGRG00001019431 ##20	Slfn14 (ENSCGRG00001017464) #20	Pex12 (ENSCGRG00001019900) #21	Ap2b1 (ENSCGRG00001020053) #22	Rasl10b (ENSCGRG00001010269) #23	Gas2l2 (ENSCGRG00001022937) #24	1700020L24Rik (ENSCGRG00001006404) #25	Mmp28 (ENSCGRG00001013370) #26	Taf15 (ENSCGRG00001012011) #27	Heatr9 (ENSCGRG00001019308) #28	Ccl5 (ENSCGRG00001017129) #29	ENSCGRG00001017750	Ccl6 (ENSCGRG00001008290) #31	Ccl3 (ENSCGRG00001019421) #32	Ccl4 (ENSCGRG00001020791) #33	ENSCGRG00001018407	ENSCGRG00001019205	Wfdc21 (ENSCGRG00001020449) #34	Heatr6 (ENSCGRG00001000753) #35
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1422	Tmem132e (ENSNGAG00000014402) #10	ENSNGAG00000017447	Cct6b (ENSNGAG00000011636) #11	Zfp830 (ENSNGAG00000014849) #12	Lig3 (ENSNGAG00000019767) #13	Rffl (ENSNGAG00000017708) #14	Rad51d (ENSNGAG00000008118) #15	Fndc8 (ENSNGAG00000019921) #16	Nle1 (ENSNGAG00000012348) #17	Unc45b (ENSNGAG00000000238) #18	Slfn5 (ENSNGAG00000014194) #19	ENSNGAG00000020404 ##20	Slfn14 (ENSNGAG00000011735) #20	ENSNGAG00000016398	ENSNGAG00000013242	ENSNGAG00000009444 #22	Rasl10b (ENSNGAG00000002106) #23	ENSNGAG00000019453	1700020L24Rik (ENSNGAG00000019913) #25	Mmp28 (ENSNGAG00000014473) #26	ENSNGAG00000015117	Taf15 (ENSNGAG00000017633) #27	Heatr9 (ENSNGAG00000011711) #28	Ccl5 (ENSNGAG00000003622) #29	ENSNGAG00000006220	Ccl3 (ENSNGAG00000003991) #32	Ccl4 (ENSNGAG00000003228) #33	ENSNGAG00000017535	Wfdc21 (ENSNGAG00000012983) #34	Heatr6 (ENSNGAG00000016534) #35	Hnf1b (ENSNGAG00000017601) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1303										Rhou (ENSNGAG00000010199)	ENSNGAG00000013788	Rab4a (ENSNGAG00000020318)	Ccsap (ENSNGAG00000020516)	Acta1 (ENSNGAG00000008844)	Nup133 (ENSNGAG00000011857)	ENSNGAG00000016124 #22	Abcb10 (ENSNGAG00000005450)	Taf5l (ENSNGAG00000013058)	Urb2 (ENSNGAG00000016524)	ENSNGAG00000000097	Galnt2 (ENSNGAG00000017214)	Pgbd5 (ENSNGAG00000016041)	ENSNGAG00000013046	Agt (ENSNGAG00000014491)	Capn9 (ENSNGAG00000017031)	2310022B05Rik (ENSNGAG00000012261)	Ttc13 (ENSNGAG00000013995)	Arv1 (ENSNGAG00000007653)	Fam89a (ENSNGAG00000015567)	Trim67 (ENSNGAG00000000094)	2810004N23Rik (ENSNGAG00000001222)