Rodentia_B ANCESTRAL SPECIES 1 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Myomorpha ANCESTRAL SPECIES ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Muroidea ANCESTRAL SPECIES ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Murinae ANCESTRAL SPECIES 6 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Mus ANCESTRAL SPECIES 2 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0017987 #7 MGP_PahariEiJ_G0017988 #8 Ccl1 (MGP_PahariEiJ_G0017989) #9 Tmem132e (MGP_PahariEiJ_G0017990) #10 Cct6b (MGP_PahariEiJ_G0017991) #11 Zfp830 (MGP_PahariEiJ_G0017992) #12 Lig3 (MGP_PahariEiJ_G0017993) #13 Rffl (MGP_PahariEiJ_G0017994) #14 Rad51d (MGP_PahariEiJ_G0017995) #15 Fndc8 (MGP_PahariEiJ_G0017996) #16 Nle1 (MGP_PahariEiJ_G0017997) #17 Unc45b (MGP_PahariEiJ_G0017998) #18 Slfn5 (MGP_PahariEiJ_G0017999) #19 Slfn14 (MGP_PahariEiJ_G0018000) #20 Pex12 (MGP_PahariEiJ_G0018001) #21 Ap2b1 (MGP_PahariEiJ_G0018002) #22 Rasl10b (MGP_PahariEiJ_G0018003) #23 Gas2l2 (MGP_PahariEiJ_G0018004) #24 1700020L24Rik (MGP_PahariEiJ_G0018005) #25 Mmp28 (MGP_PahariEiJ_G0018006) #26 Taf15 (MGP_PahariEiJ_G0018007) #27 Heatr9 (MGP_PahariEiJ_G0018008) #28 Ccl5 (MGP_PahariEiJ_G0018009) #29 Ccl9 (MGP_PahariEiJ_G0018010) #30 Ccl6 (MGP_PahariEiJ_G0018011) #31 Ccl3 (MGP_PahariEiJ_G0018012) #32 Ccl4 (MGP_PahariEiJ_G0018013) #33 Wfdc21 (MGP_PahariEiJ_G0018015) #34 Heatr6 (MGP_PahariEiJ_G0018016) #35 Hnf1b (MGP_PahariEiJ_G0018017) #36 Ddx52 (MGP_PahariEiJ_G0018018) #37 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b.b ##20 ENSGT00410000025651.A.b.a.a.b.e.b.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Mouse MODERN SPECIES 2 Lig3 (ENSMUSG00000020697) #13 Rffl (ENSMUSG00000020696) #14 Rad51d (ENSMUSG00000018841) #15 Fndc8 (ENSMUSG00000018844) #16 Nle1 (ENSMUSG00000020692) #17 Unc45b (ENSMUSG00000018845) #18 Slfn5 (ENSMUSG00000054404) #19 Slfn9 (ENSMUSG00000069793) ##20 Slfn8 (ENSMUSG00000035208) ##20 Slfn2 (ENSMUSG00000072620) ##20 Slfn1 (ENSMUSG00000078763) ##20 Slfn4 (ENSMUSG00000000204) ##20 Slfn3 (ENSMUSG00000018986) ##20 Slfn14 (ENSMUSG00000082101) #20 Pex12 (ENSMUSG00000018733) #21 Ap2b1 (ENSMUSG00000035152) #22 Rasl10b (ENSMUSG00000020684) #23 Gas2l2 (ENSMUSG00000020686) #24 1700020L24Rik (ENSMUSG00000035085) #25 Mmp28 (ENSMUSG00000020682) #26 Taf15 (ENSMUSG00000020680) #27 Heatr9 (ENSMUSG00000018925) #28 Ccl5 (ENSMUSG00000035042) #29 Ccl9 (ENSMUSG00000019122) #30 Ccl6 (ENSMUSG00000018927) #31 Ccl3 (ENSMUSG00000000982) #32 Ccl4 (ENSMUSG00000018930) #33 Wfdc17 (ENSMUSG00000069792) Wfdc18 (ENSMUSG00000000983) Wfdc21 (ENSMUSG00000051748) #34 Heatr6 (ENSMUSG00000000976) #35 Mus_C ANCESTRAL SPECIES 3 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Steppe mouse MODERN SPECIES 3305 ENSMSIG00000012844 ##20 Slfn14 (ENSMSIG00000012821) #20 Pex12 (ENSMSIG00000012790) #21 Ap2b1 (ENSMSIG00000012708) #22 Rasl10b (ENSMSIG00000012687) #23 Gas2l2 (ENSMSIG00000012668) #24 1700020L24Rik (ENSMSIG00000012643) #25 Mmp28 (ENSMSIG00000012526) #26 Taf15 (ENSMSIG00000012461) #27 Heatr9 (ENSMSIG00000012418) #28 Ccl5 (ENSMSIG00000012408) #29 Ccl9 (ENSMSIG00000012396) #30 Ccl6 (ENSMSIG00000012387) #31 Ccl3 (ENSMSIG00000012367) #32 Ccl4 (ENSMSIG00000012352) #33 ENSMSIG00000012344 ENSMSIG00000012332 ENSMSIG00000012323 Wfdc17 (ENSMSIG00000012316) spretus MODERN SPECIES 2 Lig3 (MGP_SPRETEiJ_G0017700) #13 Rffl (MGP_SPRETEiJ_G0017701) #14 Rad51d (MGP_SPRETEiJ_G0017702) #15 Fndc8 (MGP_SPRETEiJ_G0017703) #16 Nle1 (MGP_SPRETEiJ_G0017704) #17 Unc45b (MGP_SPRETEiJ_G0017705) #18 Slfn5 (MGP_SPRETEiJ_G0017706) #19 MGP_SPRETEiJ_G0017707 ##20 MGP_SPRETEiJ_G0017708 ##20 Slfn2 (MGP_SPRETEiJ_G0017709) ##20 Slfn1 (MGP_SPRETEiJ_G0017710) ##20 MGP_SPRETEiJ_G0017711 ##20 MGP_SPRETEiJ_G0017712 ##20 Slfn14 (MGP_SPRETEiJ_G0017713) #20 Pex12 (MGP_SPRETEiJ_G0017714) #21 Ap2b1 (MGP_SPRETEiJ_G0017715) #22 Rasl10b (MGP_SPRETEiJ_G0017716) #23 Gas2l2 (MGP_SPRETEiJ_G0017717) #24 1700020L24Rik (MGP_SPRETEiJ_G0017718) #25 Mmp28 (MGP_SPRETEiJ_G0017719) #26 Taf15 (MGP_SPRETEiJ_G0017720) #27 Heatr9 (MGP_SPRETEiJ_G0017721) #28 Ccl5 (MGP_SPRETEiJ_G0017722) #29 Ccl9 (MGP_SPRETEiJ_G0017723) #30 Ccl6 (MGP_SPRETEiJ_G0017724) #31 MGP_SPRETEiJ_G0017725 Ccl3 (MGP_SPRETEiJ_G0017726) #32 Ccl4 (MGP_SPRETEiJ_G0017727) #33 Wfdc17 (MGP_SPRETEiJ_G0017728) Wfdc18 (MGP_SPRETEiJ_G0017729) Wfdc21 (MGP_SPRETEiJ_G0017730) #34 Ryukyu mouse MODERN SPECIES 2 Lig3 (MGP_CAROLIEiJ_G0016856) #13 Rffl (MGP_CAROLIEiJ_G0016857) #14 Rad51d (MGP_CAROLIEiJ_G0016858) #15 Fndc8 (MGP_CAROLIEiJ_G0016859) #16 Nle1 (MGP_CAROLIEiJ_G0016860) #17 Unc45b (MGP_CAROLIEiJ_G0016861) #18 MGP_CAROLIEiJ_G0016862 #19 MGP_CAROLIEiJ_G0016863 ##20 MGP_CAROLIEiJ_G0016864 ##20 Slfn2 (MGP_CAROLIEiJ_G0016865) ##20 Slfn1 (MGP_CAROLIEiJ_G0016866) ##20 MGP_CAROLIEiJ_G0016867 ##20 MGP_CAROLIEiJ_G0016868 ##20 Slfn14 (MGP_CAROLIEiJ_G0016869) #20 Pex12 (MGP_CAROLIEiJ_G0016870) #21 Ap2b1 (MGP_CAROLIEiJ_G0016871) #22 Rasl10b (MGP_CAROLIEiJ_G0016872) #23 Gas2l2 (MGP_CAROLIEiJ_G0016873) #24 1700020L24Rik (MGP_CAROLIEiJ_G0016874) #25 Mmp28 (MGP_CAROLIEiJ_G0016875) #26 Taf15 (MGP_CAROLIEiJ_G0016876) #27 Heatr9 (MGP_CAROLIEiJ_G0016877) #28 Ccl5 (MGP_CAROLIEiJ_G0016878) #29 Ccl9 (MGP_CAROLIEiJ_G0016879) #30 Ccl6 (MGP_CAROLIEiJ_G0016880) #31 Ccl3 (MGP_CAROLIEiJ_G0016881) #32 Ccl4 (MGP_CAROLIEiJ_G0016882) #33 Wfdc17 (MGP_CAROLIEiJ_G0016883) Wfdc18 (MGP_CAROLIEiJ_G0016884) Wfdc21 (MGP_CAROLIEiJ_G0016885) #34 Heatr6 (MGP_CAROLIEiJ_G0016886) #35 Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 8 ENSRNOG00000065594 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) Rat MODERN SPECIES 8 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) H1f2 (ENSRNOG00000067441) Rat DUPLICATION Rat MODERN SPECIES 1 Unc45b (ENSRNOG00000009466) #18 ENSRNOG00000062443 Slfn5 (ENSRNOG00000021719) #19 Slfn13 (ENSRNOG00000021412) ##20 ENSRNOG00000063847 LOC108352183 (ENSRNOG00000037114) Slfn2 (ENSRNOG00000037113) ##20 Slfn1 (ENSRNOG00000048053) ##20 Slfn4 (ENSRNOG00000057092) Slfn4 (ENSRNOG00000063541) ##20 LOC688925 (ENSRNOG00000032135) AC118772.2 (ENSRNOG00000021357) ##20 ENSRNOG00000062983 ##20 AC118772.1 (ENSRNOG00000009709) #20 Pex12 (ENSRNOG00000009718) #21 Ap2b1 (ENSRNOG00000061543) #22 Rasl10b (ENSRNOG00000010302) #23 Gas2l2 (ENSRNOG00000047546) #24 LOC689039 (ENSRNOG00000049757) #25 Mmp28 (ENSRNOG00000047940) #26 Taf15 (ENSRNOG00000058393) #27 Heatr9 (ENSRNOG00000037100) #28 Ccl5 (ENSRNOG00000010906) Ccl9 (ENSRNOG00000028548) #30 Ccl6 (ENSRNOG00000030021) Ccl3 (ENSRNOG00000011205) #32 Ccl4 (ENSRNOG00000011406) #33 ENSRNOG00000070672 LOC103695128 (ENSRNOG00000051084) LOC100909660 (ENSRNOG00000066869) ENSRNOG00000066744 Rat MODERN SPECIES ENSRNOG00000066169 ENSRNOG00000068667 Zfp273l-ps1 (ENSRNOG00000046353) LOC102551340 (ENSRNOG00000047145) Spry3-ps1 (ENSRNOG00000064505) Zfp748 (ENSRNOG00000069921) LOC102549842 (ENSRNOG00000049259) LOC102547287 (ENSRNOG00000016462) RGD1566325 (ENSRNOG00000017963) ENSRNOG00000068953 Zfp455l1 (ENSRNOG00000042308) Mtrr (ENSRNOG00000017826) Fastkd3 (ENSRNOG00000027422) Cfap90 (ENSRNOG00000047406) Adcy2 (ENSRNOG00000032150) Ap2b1-ps1 (ENSRNOG00000017678) #22 Tent4a (ENSRNOG00000017613) Srd5a1 (ENSRNOG00000017601) Nsun2 (ENSRNOG00000017254) Ube2ql1 (ENSRNOG00000034075) Med10 (ENSRNOG00000017150) Dlat-ps1 (ENSRNOG00000017095) Ice1 (ENSRNOG00000023053) Adamts16 (ENSRNOG00000016812) Irx1 (ENSRNOG00000033609) Irx2 (ENSRNOG00000012742) Irx4 (ENSRNOG00000012720) Ndufs6l1 (ENSRNOG00000062531) Mrpl36 (ENSRNOG00000023407) Lpcat1 (ENSRNOG00000017930) Slc6a3 (ENSRNOG00000017302) Cricetidae ANCESTRAL SPECIES ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.e ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.e ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Northern American deer mouse MODERN SPECIES 21 Tmem132e (ENSPEMG00000016046) #10 Cct6b (ENSPEMG00000022000) #11 Zfp830 (ENSPEMG00000024107) #12 Lig3 (ENSPEMG00000021826) #13 Rffl (ENSPEMG00000023690) #14 Rad51d (ENSPEMG00000022893) #15 Fndc8 (ENSPEMG00000012327) #16 Nle1 (ENSPEMG00000023993) #17 Unc45b (ENSPEMG00000008983) #18 Slfn5 (ENSPEMG00000021448) #19 Slfn9 (ENSPEMG00000010005) ##20 ENSPEMG00000024894 ENSPEMG00000010010 Slfn14 (ENSPEMG00000012902) #20 Pex12 (ENSPEMG00000030925) #21 Ap2b1 (ENSPEMG00000018294) #22 Rasl10b (ENSPEMG00000027697) #23 Gas2l2 (ENSPEMG00000018233) #24 1700020L24Rik (ENSPEMG00000013417) #25 Mmp28 (ENSPEMG00000019080) #26 Taf15 (ENSPEMG00000018715) #27 Heatr9 (ENSPEMG00000009167) #28 Ccl5 (ENSPEMG00000008561) #29 Ccl9 (ENSPEMG00000028232) #30 Ccl6 (ENSPEMG00000008169) #31 Ccl3 (ENSPEMG00000028000) #32 ENSPEMG00000030825 #33 ENSPEMG00000026681 ENSPEMG00000027305 #33 ENSPEMG00000025016 #33 ENSPEMG00000028019 #33 Prairie vole MODERN SPECIES 15 Tmem132e (ENSMOCG00000017883) #10 Cct6b (ENSMOCG00000015382) #11 Zfp830 (ENSMOCG00000002661) #12 Lig3 (ENSMOCG00000013887) #13 Rffl (ENSMOCG00000005235) #14 Rad51d (ENSMOCG00000019246) #15 Fndc8 (ENSMOCG00000016181) #16 Nle1 (ENSMOCG00000005383) #17 Unc45b (ENSMOCG00000016526) #18 Slfn5 (ENSMOCG00000010517) #19 ENSMOCG00000018543 ##20 Slfn2 (ENSMOCG00000021779) ##20 Slfn1 (ENSMOCG00000005408) ##20 Slfn14 (ENSMOCG00000008378) #20 Pex12 (ENSMOCG00000016233) #21 Ap2b1 (ENSMOCG00000014475) #22 Rasl10b (ENSMOCG00000001964) #23 Gas2l2 (ENSMOCG00000005581) #24 1700020L24Rik (ENSMOCG00000019897) #25 Mmp28 (ENSMOCG00000018460) #26 Taf15 (ENSMOCG00000015121) #27 Heatr9 (ENSMOCG00000009616) #28 Ccl5 (ENSMOCG00000020386) #29 ENSMOCG00000002418 ENSMOCG00000012772 ENSMOCG00000013583 #32 Ccl4 (ENSMOCG00000012149) #33 ENSMOCG00000013687 ENSMOCG00000016372 Wfdc21 (ENSMOCG00000019007) #34 Heatr6 (ENSMOCG00000015431) #35 Cricetinae ANCESTRAL SPECIES ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476.d ENSGT00940000165476.c ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.e ENSGT00530000064879.f ENSGT00520000060616 #34 Golden Hamster MODERN SPECIES 684 ENSMAUG00000013646 ##33 Tmem132e (ENSMAUG00000016009) #10 Cct6b (ENSMAUG00000001673) #11 Zfp830 (ENSMAUG00000012194) #12 Lig3 (ENSMAUG00000020082) #13 Rffl (ENSMAUG00000003967) #14 Rad51d (ENSMAUG00000009497) #15 Fndc8 (ENSMAUG00000016080) #16 Nle1 (ENSMAUG00000016623) #17 Unc45b (ENSMAUG00000011322) #18 ENSMAUG00000009126 #19 Slfn9 (ENSMAUG00000013430) ##20 Slfn1 (ENSMAUG00000003013) ##20 Slfn14 (ENSMAUG00000020439) #20 Pex12 (ENSMAUG00000004768) #21 Ap2b1 (ENSMAUG00000021295) #22 Rasl10b (ENSMAUG00000011536) #23 Gas2l2 (ENSMAUG00000001264) #24 ENSMAUG00000018386 #27 Heatr9 (ENSMAUG00000019408) #28 Ccl5 (ENSMAUG00000000781) #29 ENSMAUG00000021412 ENSMAUG00000015635 Ccl3 (ENSMAUG00000021167) #32 Ccl4 (ENSMAUG00000020742) #33 ENSMAUG00000009975 Wfdc21 (ENSMAUG00000018673) #34 Heatr6 (ENSMAUG00000009627) #35 Hnf1b (ENSMAUG00000009573) #36 ENSMAUG00000007943 Ddx52 (ENSMAUG00000021084) #37 Chinese hamster chok1gshd MODERN SPECIES 33 Cct6b (ENSCGRG00001020850) #11 Zfp830 (ENSCGRG00001003631) #12 Lig3 (ENSCGRG00001004370) #13 Rffl (ENSCGRG00001019316) #14 Rad51d (ENSCGRG00001012167) #15 Fndc8 (ENSCGRG00001013060) #16 Nle1 (ENSCGRG00001009877) #17 Unc45b (ENSCGRG00001022400) #18 Slfn5 (ENSCGRG00001016905) #19 Slfn9 (ENSCGRG00001021962) ##20 Slfn2 (ENSCGRG00001022663) ##20 Slfn1 (ENSCGRG00001009249) ##20 ENSCGRG00001019431 ##20 Slfn14 (ENSCGRG00001017464) #20 Pex12 (ENSCGRG00001019900) #21 Ap2b1 (ENSCGRG00001020053) #22 Rasl10b (ENSCGRG00001010269) #23 Gas2l2 (ENSCGRG00001022937) #24 1700020L24Rik (ENSCGRG00001006404) #25 Mmp28 (ENSCGRG00001013370) #26 Taf15 (ENSCGRG00001012011) #27 Heatr9 (ENSCGRG00001019308) #28 Ccl5 (ENSCGRG00001017129) #29 ENSCGRG00001017750 Ccl6 (ENSCGRG00001008290) #31 Ccl3 (ENSCGRG00001019421) #32 Ccl4 (ENSCGRG00001020791) #33 ENSCGRG00001018407 ENSCGRG00001019205 Wfdc21 (ENSCGRG00001020449) #34 Heatr6 (ENSCGRG00001000753) #35 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Tmem132e (ENSNGAG00000014402) #10 ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) #11 Zfp830 (ENSNGAG00000014849) #12 Lig3 (ENSNGAG00000019767) #13 Rffl (ENSNGAG00000017708) #14 Rad51d (ENSNGAG00000008118) #15 Fndc8 (ENSNGAG00000019921) #16 Nle1 (ENSNGAG00000012348) #17 Unc45b (ENSNGAG00000000238) #18 Slfn5 (ENSNGAG00000014194) #19 ENSNGAG00000020404 ##20 Slfn14 (ENSNGAG00000011735) #20 ENSNGAG00000016398 ENSNGAG00000013242 ENSNGAG00000009444 #22 Rasl10b (ENSNGAG00000002106) #23 ENSNGAG00000019453 1700020L24Rik (ENSNGAG00000019913) #25 Mmp28 (ENSNGAG00000014473) #26 ENSNGAG00000015117 Taf15 (ENSNGAG00000017633) #27 Heatr9 (ENSNGAG00000011711) #28 Ccl5 (ENSNGAG00000003622) #29 ENSNGAG00000006220 Ccl3 (ENSNGAG00000003991) #32 Ccl4 (ENSNGAG00000003228) #33 ENSNGAG00000017535 Wfdc21 (ENSNGAG00000012983) #34 Heatr6 (ENSNGAG00000016534) #35 Hnf1b (ENSNGAG00000017601) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1303 Rhou (ENSNGAG00000010199) ENSNGAG00000013788 Rab4a (ENSNGAG00000020318) Ccsap (ENSNGAG00000020516) Acta1 (ENSNGAG00000008844) Nup133 (ENSNGAG00000011857) ENSNGAG00000016124 #22 Abcb10 (ENSNGAG00000005450) Taf5l (ENSNGAG00000013058) Urb2 (ENSNGAG00000016524) ENSNGAG00000000097 Galnt2 (ENSNGAG00000017214) Pgbd5 (ENSNGAG00000016041) ENSNGAG00000013046 Agt (ENSNGAG00000014491) Capn9 (ENSNGAG00000017031) 2310022B05Rik (ENSNGAG00000012261) Ttc13 (ENSNGAG00000013995) Arv1 (ENSNGAG00000007653) Fam89a (ENSNGAG00000015567) Trim67 (ENSNGAG00000000094) 2810004N23Rik (ENSNGAG00000001222) Lesser Egyptian jerboa MODERN SPECIES 112 Tmem132e (ENSJJAG00000018290) #10 Cct6b (ENSJJAG00000014826) #11 Zfp830 (ENSJJAG00000010210) #12 Lig3 (ENSJJAG00000003848) #13 Rffl (ENSJJAG00000020929) #14 Rad51d (ENSJJAG00000014931) #15 Fndc8 (ENSJJAG00000018336) #16 Nle1 (ENSJJAG00000008356) #17 Unc45b (ENSJJAG00000018066) #18 ENSJJAG00000016743 ENSJJAG00000020087 ##20 ENSJJAG00000024250 ##20 ENSJJAG00000018288 Slfn14 (ENSJJAG00000016028) #20 ENSJJAG00000008010 Ap2b1 (ENSJJAG00000023688) #22 Rasl10b (ENSJJAG00000011469) #23 ENSJJAG00000020015 1700020L24Rik (ENSJJAG00000011369) #25 Mmp28 (ENSJJAG00000009319) #26 Taf15 (ENSJJAG00000010606) #27 Heatr9 (ENSJJAG00000012557) #28 Ccl5 (ENSJJAG00000024069) #29 Ccl3 (ENSJJAG00000022032) #32 Ccl4 (ENSJJAG00000011404) #33 ENSJJAG00000023138 Wfdc21 (ENSJJAG00000014661) #34 Heatr6 (ENSJJAG00000012154) #35 Hnf1b (ENSJJAG00000011207) #36 Ddx52 (ENSJJAG00000021877) #37 Synrg (ENSJJAG00000021827) Kangaroo rat MODERN SPECIES 338 Cct6b (ENSDORG00000001249) #11 Lig3 (ENSDORG00000013422) #13 Rffl (ENSDORG00000013424) #14 Rad51d (ENSDORG00000024542) #15 Fndc8 (ENSDORG00000000843) #16 Nle1 (ENSDORG00000000845) #17 Unc45b (ENSDORG00000000847) #18 ENSDORG00000023333 ##20 Pex12 (ENSDORG00000026935) #21 Ap2b1 (ENSDORG00000003803) #22 Rasl10b (ENSDORG00000003805) #23 ENSDORG00000026155 1700020L24Rik (ENSDORG00000003808) #25 Mmp28 (ENSDORG00000003809) #26 Taf15 (ENSDORG00000014619) #27 ENSDORG00000003141 #28 Ccl5 (ENSDORG00000007688) #29 Ccl4 (ENSDORG00000026295) #33 Wfdc21 (ENSDORG00000024216) #34 Heatr6 (ENSDORG00000011214) #35 Hnf1b (ENSDORG00000009669) #36 Ddx52 (ENSDORG00000004276) #37 Synrg (ENSDORG00000004275) Dusp14 (ENSDORG00000025341) Tada2a (ENSDORG00000009547)