Glires ANCESTRAL SPECIES 3 ENSGT01100000263482.A.a.a.c.a #8 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.a.a ##33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #32 Rodentia ANCESTRAL SPECIES 4 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.a.a ##33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #32 Rodentia_B ANCESTRAL SPECIES 1 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Myomorpha ANCESTRAL SPECIES ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Muroidea ANCESTRAL SPECIES ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Murinae ANCESTRAL SPECIES 6 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Mus ANCESTRAL SPECIES 2 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0017987 #7 MGP_PahariEiJ_G0017988 #8 Ccl1 (MGP_PahariEiJ_G0017989) #9 Tmem132e (MGP_PahariEiJ_G0017990) #10 Cct6b (MGP_PahariEiJ_G0017991) #11 Zfp830 (MGP_PahariEiJ_G0017992) #12 Lig3 (MGP_PahariEiJ_G0017993) #13 Rffl (MGP_PahariEiJ_G0017994) #14 Rad51d (MGP_PahariEiJ_G0017995) #15 Fndc8 (MGP_PahariEiJ_G0017996) #16 Nle1 (MGP_PahariEiJ_G0017997) #17 Unc45b (MGP_PahariEiJ_G0017998) #18 Slfn5 (MGP_PahariEiJ_G0017999) #19 Slfn14 (MGP_PahariEiJ_G0018000) #20 Pex12 (MGP_PahariEiJ_G0018001) #21 Ap2b1 (MGP_PahariEiJ_G0018002) #22 Rasl10b (MGP_PahariEiJ_G0018003) #23 Gas2l2 (MGP_PahariEiJ_G0018004) #24 1700020L24Rik (MGP_PahariEiJ_G0018005) #25 Mmp28 (MGP_PahariEiJ_G0018006) #26 Taf15 (MGP_PahariEiJ_G0018007) #27 Heatr9 (MGP_PahariEiJ_G0018008) #28 Ccl5 (MGP_PahariEiJ_G0018009) #29 Ccl9 (MGP_PahariEiJ_G0018010) #30 Ccl6 (MGP_PahariEiJ_G0018011) #31 Ccl3 (MGP_PahariEiJ_G0018012) #32 Ccl4 (MGP_PahariEiJ_G0018013) #33 Wfdc21 (MGP_PahariEiJ_G0018015) #34 Heatr6 (MGP_PahariEiJ_G0018016) #35 Hnf1b (MGP_PahariEiJ_G0018017) #36 Ddx52 (MGP_PahariEiJ_G0018018) #37 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b.b ##20 ENSGT00410000025651.A.b.a.a.b.e.b.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Mouse MODERN SPECIES 2 Lig3 (ENSMUSG00000020697) #13 Rffl (ENSMUSG00000020696) #14 Rad51d (ENSMUSG00000018841) #15 Fndc8 (ENSMUSG00000018844) #16 Nle1 (ENSMUSG00000020692) #17 Unc45b (ENSMUSG00000018845) #18 Slfn5 (ENSMUSG00000054404) #19 Slfn9 (ENSMUSG00000069793) ##20 Slfn8 (ENSMUSG00000035208) ##20 Slfn2 (ENSMUSG00000072620) ##20 Slfn1 (ENSMUSG00000078763) ##20 Slfn4 (ENSMUSG00000000204) ##20 Slfn3 (ENSMUSG00000018986) ##20 Slfn14 (ENSMUSG00000082101) #20 Pex12 (ENSMUSG00000018733) #21 Ap2b1 (ENSMUSG00000035152) #22 Rasl10b (ENSMUSG00000020684) #23 Gas2l2 (ENSMUSG00000020686) #24 1700020L24Rik (ENSMUSG00000035085) #25 Mmp28 (ENSMUSG00000020682) #26 Taf15 (ENSMUSG00000020680) #27 Heatr9 (ENSMUSG00000018925) #28 Ccl5 (ENSMUSG00000035042) #29 Ccl9 (ENSMUSG00000019122) #30 Ccl6 (ENSMUSG00000018927) #31 Ccl3 (ENSMUSG00000000982) #32 Ccl4 (ENSMUSG00000018930) #33 Wfdc17 (ENSMUSG00000069792) Wfdc18 (ENSMUSG00000000983) Wfdc21 (ENSMUSG00000051748) #34 Heatr6 (ENSMUSG00000000976) #35 Mus_C ANCESTRAL SPECIES 3 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 #34 ENSGT00390000016675 #35 Steppe mouse MODERN SPECIES 3305 ENSMSIG00000012844 ##20 Slfn14 (ENSMSIG00000012821) #20 Pex12 (ENSMSIG00000012790) #21 Ap2b1 (ENSMSIG00000012708) #22 Rasl10b (ENSMSIG00000012687) #23 Gas2l2 (ENSMSIG00000012668) #24 1700020L24Rik (ENSMSIG00000012643) #25 Mmp28 (ENSMSIG00000012526) #26 Taf15 (ENSMSIG00000012461) #27 Heatr9 (ENSMSIG00000012418) #28 Ccl5 (ENSMSIG00000012408) #29 Ccl9 (ENSMSIG00000012396) #30 Ccl6 (ENSMSIG00000012387) #31 Ccl3 (ENSMSIG00000012367) #32 Ccl4 (ENSMSIG00000012352) #33 ENSMSIG00000012344 ENSMSIG00000012332 ENSMSIG00000012323 Wfdc17 (ENSMSIG00000012316) spretus MODERN SPECIES 2 Lig3 (MGP_SPRETEiJ_G0017700) #13 Rffl (MGP_SPRETEiJ_G0017701) #14 Rad51d (MGP_SPRETEiJ_G0017702) #15 Fndc8 (MGP_SPRETEiJ_G0017703) #16 Nle1 (MGP_SPRETEiJ_G0017704) #17 Unc45b (MGP_SPRETEiJ_G0017705) #18 Slfn5 (MGP_SPRETEiJ_G0017706) #19 MGP_SPRETEiJ_G0017707 ##20 MGP_SPRETEiJ_G0017708 ##20 Slfn2 (MGP_SPRETEiJ_G0017709) ##20 Slfn1 (MGP_SPRETEiJ_G0017710) ##20 MGP_SPRETEiJ_G0017711 ##20 MGP_SPRETEiJ_G0017712 ##20 Slfn14 (MGP_SPRETEiJ_G0017713) #20 Pex12 (MGP_SPRETEiJ_G0017714) #21 Ap2b1 (MGP_SPRETEiJ_G0017715) #22 Rasl10b (MGP_SPRETEiJ_G0017716) #23 Gas2l2 (MGP_SPRETEiJ_G0017717) #24 1700020L24Rik (MGP_SPRETEiJ_G0017718) #25 Mmp28 (MGP_SPRETEiJ_G0017719) #26 Taf15 (MGP_SPRETEiJ_G0017720) #27 Heatr9 (MGP_SPRETEiJ_G0017721) #28 Ccl5 (MGP_SPRETEiJ_G0017722) #29 Ccl9 (MGP_SPRETEiJ_G0017723) #30 Ccl6 (MGP_SPRETEiJ_G0017724) #31 MGP_SPRETEiJ_G0017725 Ccl3 (MGP_SPRETEiJ_G0017726) #32 Ccl4 (MGP_SPRETEiJ_G0017727) #33 Wfdc17 (MGP_SPRETEiJ_G0017728) Wfdc18 (MGP_SPRETEiJ_G0017729) Wfdc21 (MGP_SPRETEiJ_G0017730) #34 Ryukyu mouse MODERN SPECIES 2 Lig3 (MGP_CAROLIEiJ_G0016856) #13 Rffl (MGP_CAROLIEiJ_G0016857) #14 Rad51d (MGP_CAROLIEiJ_G0016858) #15 Fndc8 (MGP_CAROLIEiJ_G0016859) #16 Nle1 (MGP_CAROLIEiJ_G0016860) #17 Unc45b (MGP_CAROLIEiJ_G0016861) #18 MGP_CAROLIEiJ_G0016862 #19 MGP_CAROLIEiJ_G0016863 ##20 MGP_CAROLIEiJ_G0016864 ##20 Slfn2 (MGP_CAROLIEiJ_G0016865) ##20 Slfn1 (MGP_CAROLIEiJ_G0016866) ##20 MGP_CAROLIEiJ_G0016867 ##20 MGP_CAROLIEiJ_G0016868 ##20 Slfn14 (MGP_CAROLIEiJ_G0016869) #20 Pex12 (MGP_CAROLIEiJ_G0016870) #21 Ap2b1 (MGP_CAROLIEiJ_G0016871) #22 Rasl10b (MGP_CAROLIEiJ_G0016872) #23 Gas2l2 (MGP_CAROLIEiJ_G0016873) #24 1700020L24Rik (MGP_CAROLIEiJ_G0016874) #25 Mmp28 (MGP_CAROLIEiJ_G0016875) #26 Taf15 (MGP_CAROLIEiJ_G0016876) #27 Heatr9 (MGP_CAROLIEiJ_G0016877) #28 Ccl5 (MGP_CAROLIEiJ_G0016878) #29 Ccl9 (MGP_CAROLIEiJ_G0016879) #30 Ccl6 (MGP_CAROLIEiJ_G0016880) #31 Ccl3 (MGP_CAROLIEiJ_G0016881) #32 Ccl4 (MGP_CAROLIEiJ_G0016882) #33 Wfdc17 (MGP_CAROLIEiJ_G0016883) Wfdc18 (MGP_CAROLIEiJ_G0016884) Wfdc21 (MGP_CAROLIEiJ_G0016885) #34 Heatr6 (MGP_CAROLIEiJ_G0016886) #35 Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 8 ENSRNOG00000065594 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) Rat MODERN SPECIES 8 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) H1f2 (ENSRNOG00000067441) Rat DUPLICATION Rat MODERN SPECIES 1 Unc45b (ENSRNOG00000009466) #18 ENSRNOG00000062443 Slfn5 (ENSRNOG00000021719) #19 Slfn13 (ENSRNOG00000021412) ##20 ENSRNOG00000063847 LOC108352183 (ENSRNOG00000037114) Slfn2 (ENSRNOG00000037113) ##20 Slfn1 (ENSRNOG00000048053) ##20 Slfn4 (ENSRNOG00000057092) Slfn4 (ENSRNOG00000063541) ##20 LOC688925 (ENSRNOG00000032135) AC118772.2 (ENSRNOG00000021357) ##20 ENSRNOG00000062983 ##20 AC118772.1 (ENSRNOG00000009709) #20 Pex12 (ENSRNOG00000009718) #21 Ap2b1 (ENSRNOG00000061543) #22 Rasl10b (ENSRNOG00000010302) #23 Gas2l2 (ENSRNOG00000047546) #24 LOC689039 (ENSRNOG00000049757) #25 Mmp28 (ENSRNOG00000047940) #26 Taf15 (ENSRNOG00000058393) #27 Heatr9 (ENSRNOG00000037100) #28 Ccl5 (ENSRNOG00000010906) Ccl9 (ENSRNOG00000028548) #30 Ccl6 (ENSRNOG00000030021) Ccl3 (ENSRNOG00000011205) #32 Ccl4 (ENSRNOG00000011406) #33 ENSRNOG00000070672 LOC103695128 (ENSRNOG00000051084) LOC100909660 (ENSRNOG00000066869) ENSRNOG00000066744 Rat MODERN SPECIES ENSRNOG00000066169 ENSRNOG00000068667 Zfp273l-ps1 (ENSRNOG00000046353) LOC102551340 (ENSRNOG00000047145) Spry3-ps1 (ENSRNOG00000064505) Zfp748 (ENSRNOG00000069921) LOC102549842 (ENSRNOG00000049259) LOC102547287 (ENSRNOG00000016462) RGD1566325 (ENSRNOG00000017963) ENSRNOG00000068953 Zfp455l1 (ENSRNOG00000042308) Mtrr (ENSRNOG00000017826) Fastkd3 (ENSRNOG00000027422) Cfap90 (ENSRNOG00000047406) Adcy2 (ENSRNOG00000032150) Ap2b1-ps1 (ENSRNOG00000017678) #22 Tent4a (ENSRNOG00000017613) Srd5a1 (ENSRNOG00000017601) Nsun2 (ENSRNOG00000017254) Ube2ql1 (ENSRNOG00000034075) Med10 (ENSRNOG00000017150) Dlat-ps1 (ENSRNOG00000017095) Ice1 (ENSRNOG00000023053) Adamts16 (ENSRNOG00000016812) Irx1 (ENSRNOG00000033609) Irx2 (ENSRNOG00000012742) Irx4 (ENSRNOG00000012720) Ndufs6l1 (ENSRNOG00000062531) Mrpl36 (ENSRNOG00000023407) Lpcat1 (ENSRNOG00000017930) Slc6a3 (ENSRNOG00000017302) Cricetidae ANCESTRAL SPECIES ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.e ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #30 ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.e ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Northern American deer mouse MODERN SPECIES 21 Tmem132e (ENSPEMG00000016046) #10 Cct6b (ENSPEMG00000022000) #11 Zfp830 (ENSPEMG00000024107) #12 Lig3 (ENSPEMG00000021826) #13 Rffl (ENSPEMG00000023690) #14 Rad51d (ENSPEMG00000022893) #15 Fndc8 (ENSPEMG00000012327) #16 Nle1 (ENSPEMG00000023993) #17 Unc45b (ENSPEMG00000008983) #18 Slfn5 (ENSPEMG00000021448) #19 Slfn9 (ENSPEMG00000010005) ##20 ENSPEMG00000024894 ENSPEMG00000010010 Slfn14 (ENSPEMG00000012902) #20 Pex12 (ENSPEMG00000030925) #21 Ap2b1 (ENSPEMG00000018294) #22 Rasl10b (ENSPEMG00000027697) #23 Gas2l2 (ENSPEMG00000018233) #24 1700020L24Rik (ENSPEMG00000013417) #25 Mmp28 (ENSPEMG00000019080) #26 Taf15 (ENSPEMG00000018715) #27 Heatr9 (ENSPEMG00000009167) #28 Ccl5 (ENSPEMG00000008561) #29 Ccl9 (ENSPEMG00000028232) #30 Ccl6 (ENSPEMG00000008169) #31 Ccl3 (ENSPEMG00000028000) #32 ENSPEMG00000030825 #33 ENSPEMG00000026681 ENSPEMG00000027305 #33 ENSPEMG00000025016 #33 ENSPEMG00000028019 #33 Prairie vole MODERN SPECIES 15 Tmem132e (ENSMOCG00000017883) #10 Cct6b (ENSMOCG00000015382) #11 Zfp830 (ENSMOCG00000002661) #12 Lig3 (ENSMOCG00000013887) #13 Rffl (ENSMOCG00000005235) #14 Rad51d (ENSMOCG00000019246) #15 Fndc8 (ENSMOCG00000016181) #16 Nle1 (ENSMOCG00000005383) #17 Unc45b (ENSMOCG00000016526) #18 Slfn5 (ENSMOCG00000010517) #19 ENSMOCG00000018543 ##20 Slfn2 (ENSMOCG00000021779) ##20 Slfn1 (ENSMOCG00000005408) ##20 Slfn14 (ENSMOCG00000008378) #20 Pex12 (ENSMOCG00000016233) #21 Ap2b1 (ENSMOCG00000014475) #22 Rasl10b (ENSMOCG00000001964) #23 Gas2l2 (ENSMOCG00000005581) #24 1700020L24Rik (ENSMOCG00000019897) #25 Mmp28 (ENSMOCG00000018460) #26 Taf15 (ENSMOCG00000015121) #27 Heatr9 (ENSMOCG00000009616) #28 Ccl5 (ENSMOCG00000020386) #29 ENSMOCG00000002418 ENSMOCG00000012772 ENSMOCG00000013583 #32 Ccl4 (ENSMOCG00000012149) #33 ENSMOCG00000013687 ENSMOCG00000016372 Wfdc21 (ENSMOCG00000019007) #34 Heatr6 (ENSMOCG00000015431) #35 Cricetinae ANCESTRAL SPECIES ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b.e.a ##20 ENSGT00410000025651.A.b.a.a.b.f ##20 ENSGT00410000025651.A.b.a.a.b.e.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476.d ENSGT00940000165476.c ENSGT01100000263482.C.c.b.a.b.a.n #31 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00530000064879.e ENSGT00530000064879.f ENSGT00520000060616 #34 Golden Hamster MODERN SPECIES 684 ENSMAUG00000013646 ##33 Tmem132e (ENSMAUG00000016009) #10 Cct6b (ENSMAUG00000001673) #11 Zfp830 (ENSMAUG00000012194) #12 Lig3 (ENSMAUG00000020082) #13 Rffl (ENSMAUG00000003967) #14 Rad51d (ENSMAUG00000009497) #15 Fndc8 (ENSMAUG00000016080) #16 Nle1 (ENSMAUG00000016623) #17 Unc45b (ENSMAUG00000011322) #18 ENSMAUG00000009126 #19 Slfn9 (ENSMAUG00000013430) ##20 Slfn1 (ENSMAUG00000003013) ##20 Slfn14 (ENSMAUG00000020439) #20 Pex12 (ENSMAUG00000004768) #21 Ap2b1 (ENSMAUG00000021295) #22 Rasl10b (ENSMAUG00000011536) #23 Gas2l2 (ENSMAUG00000001264) #24 ENSMAUG00000018386 #27 Heatr9 (ENSMAUG00000019408) #28 Ccl5 (ENSMAUG00000000781) #29 ENSMAUG00000021412 ENSMAUG00000015635 Ccl3 (ENSMAUG00000021167) #32 Ccl4 (ENSMAUG00000020742) #33 ENSMAUG00000009975 Wfdc21 (ENSMAUG00000018673) #34 Heatr6 (ENSMAUG00000009627) #35 Hnf1b (ENSMAUG00000009573) #36 ENSMAUG00000007943 Ddx52 (ENSMAUG00000021084) #37 Chinese hamster chok1gshd MODERN SPECIES 33 Cct6b (ENSCGRG00001020850) #11 Zfp830 (ENSCGRG00001003631) #12 Lig3 (ENSCGRG00001004370) #13 Rffl (ENSCGRG00001019316) #14 Rad51d (ENSCGRG00001012167) #15 Fndc8 (ENSCGRG00001013060) #16 Nle1 (ENSCGRG00001009877) #17 Unc45b (ENSCGRG00001022400) #18 Slfn5 (ENSCGRG00001016905) #19 Slfn9 (ENSCGRG00001021962) ##20 Slfn2 (ENSCGRG00001022663) ##20 Slfn1 (ENSCGRG00001009249) ##20 ENSCGRG00001019431 ##20 Slfn14 (ENSCGRG00001017464) #20 Pex12 (ENSCGRG00001019900) #21 Ap2b1 (ENSCGRG00001020053) #22 Rasl10b (ENSCGRG00001010269) #23 Gas2l2 (ENSCGRG00001022937) #24 1700020L24Rik (ENSCGRG00001006404) #25 Mmp28 (ENSCGRG00001013370) #26 Taf15 (ENSCGRG00001012011) #27 Heatr9 (ENSCGRG00001019308) #28 Ccl5 (ENSCGRG00001017129) #29 ENSCGRG00001017750 Ccl6 (ENSCGRG00001008290) #31 Ccl3 (ENSCGRG00001019421) #32 Ccl4 (ENSCGRG00001020791) #33 ENSCGRG00001018407 ENSCGRG00001019205 Wfdc21 (ENSCGRG00001020449) #34 Heatr6 (ENSCGRG00001000753) #35 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Tmem132e (ENSNGAG00000014402) #10 ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) #11 Zfp830 (ENSNGAG00000014849) #12 Lig3 (ENSNGAG00000019767) #13 Rffl (ENSNGAG00000017708) #14 Rad51d (ENSNGAG00000008118) #15 Fndc8 (ENSNGAG00000019921) #16 Nle1 (ENSNGAG00000012348) #17 Unc45b (ENSNGAG00000000238) #18 Slfn5 (ENSNGAG00000014194) #19 ENSNGAG00000020404 ##20 Slfn14 (ENSNGAG00000011735) #20 ENSNGAG00000016398 ENSNGAG00000013242 ENSNGAG00000009444 #22 Rasl10b (ENSNGAG00000002106) #23 ENSNGAG00000019453 1700020L24Rik (ENSNGAG00000019913) #25 Mmp28 (ENSNGAG00000014473) #26 ENSNGAG00000015117 Taf15 (ENSNGAG00000017633) #27 Heatr9 (ENSNGAG00000011711) #28 Ccl5 (ENSNGAG00000003622) #29 ENSNGAG00000006220 Ccl3 (ENSNGAG00000003991) #32 Ccl4 (ENSNGAG00000003228) #33 ENSNGAG00000017535 Wfdc21 (ENSNGAG00000012983) #34 Heatr6 (ENSNGAG00000016534) #35 Hnf1b (ENSNGAG00000017601) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1303 Rhou (ENSNGAG00000010199) ENSNGAG00000013788 Rab4a (ENSNGAG00000020318) Ccsap (ENSNGAG00000020516) Acta1 (ENSNGAG00000008844) Nup133 (ENSNGAG00000011857) ENSNGAG00000016124 #22 Abcb10 (ENSNGAG00000005450) Taf5l (ENSNGAG00000013058) Urb2 (ENSNGAG00000016524) ENSNGAG00000000097 Galnt2 (ENSNGAG00000017214) Pgbd5 (ENSNGAG00000016041) ENSNGAG00000013046 Agt (ENSNGAG00000014491) Capn9 (ENSNGAG00000017031) 2310022B05Rik (ENSNGAG00000012261) Ttc13 (ENSNGAG00000013995) Arv1 (ENSNGAG00000007653) Fam89a (ENSNGAG00000015567) Trim67 (ENSNGAG00000000094) 2810004N23Rik (ENSNGAG00000001222) Lesser Egyptian jerboa MODERN SPECIES 112 Tmem132e (ENSJJAG00000018290) #10 Cct6b (ENSJJAG00000014826) #11 Zfp830 (ENSJJAG00000010210) #12 Lig3 (ENSJJAG00000003848) #13 Rffl (ENSJJAG00000020929) #14 Rad51d (ENSJJAG00000014931) #15 Fndc8 (ENSJJAG00000018336) #16 Nle1 (ENSJJAG00000008356) #17 Unc45b (ENSJJAG00000018066) #18 ENSJJAG00000016743 ENSJJAG00000020087 ##20 ENSJJAG00000024250 ##20 ENSJJAG00000018288 Slfn14 (ENSJJAG00000016028) #20 ENSJJAG00000008010 Ap2b1 (ENSJJAG00000023688) #22 Rasl10b (ENSJJAG00000011469) #23 ENSJJAG00000020015 1700020L24Rik (ENSJJAG00000011369) #25 Mmp28 (ENSJJAG00000009319) #26 Taf15 (ENSJJAG00000010606) #27 Heatr9 (ENSJJAG00000012557) #28 Ccl5 (ENSJJAG00000024069) #29 Ccl3 (ENSJJAG00000022032) #32 Ccl4 (ENSJJAG00000011404) #33 ENSJJAG00000023138 Wfdc21 (ENSJJAG00000014661) #34 Heatr6 (ENSJJAG00000012154) #35 Hnf1b (ENSJJAG00000011207) #36 Ddx52 (ENSJJAG00000021877) #37 Synrg (ENSJJAG00000021827) Kangaroo rat MODERN SPECIES 338 Cct6b (ENSDORG00000001249) #11 Lig3 (ENSDORG00000013422) #13 Rffl (ENSDORG00000013424) #14 Rad51d (ENSDORG00000024542) #15 Fndc8 (ENSDORG00000000843) #16 Nle1 (ENSDORG00000000845) #17 Unc45b (ENSDORG00000000847) #18 ENSDORG00000023333 ##20 Pex12 (ENSDORG00000026935) #21 Ap2b1 (ENSDORG00000003803) #22 Rasl10b (ENSDORG00000003805) #23 ENSDORG00000026155 1700020L24Rik (ENSDORG00000003808) #25 Mmp28 (ENSDORG00000003809) #26 Taf15 (ENSDORG00000014619) #27 ENSDORG00000003141 #28 Ccl5 (ENSDORG00000007688) #29 Ccl4 (ENSDORG00000026295) #33 Wfdc21 (ENSDORG00000024216) #34 Heatr6 (ENSDORG00000011214) #35 Hnf1b (ENSDORG00000009669) #36 Ddx52 (ENSDORG00000004276) #37 Synrg (ENSDORG00000004275) Dusp14 (ENSDORG00000025341) Tada2a (ENSDORG00000009547) Rodentia_A ANCESTRAL SPECIES 3 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT00960000187851 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 ENSGT00550000074863 #37 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.a.a ##33 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.b.b.b ##33 ENSGT01100000263482.C.c.a #33 ENSGT00940000166945 Hystricomorpha_a ANCESTRAL SPECIES ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.b ##33 ENSGT01100000263482.C.c.a #33 ENSGT00940000166945 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 32 ENSCPOG00000013468 #8 CCL7 (ENSCPOG00000013035) ##33 CCL11 (ENSCPOG00000032138) ##33 ENSCPOG00000033402 #8 TMEM132E (ENSCPOG00000001908) #10 CCT6B (ENSCPOG00000002794) #11 ZNF830 (ENSCPOG00000031218) #12 LIG3 (ENSCPOG00000013032) #13 RFFL (ENSCPOG00000022966) #14 RAD51D (ENSCPOG00000025259) #15 FNDC8 (ENSCPOG00000020325) #16 NLE1 (ENSCPOG00000013116) #17 UNC45B (ENSCPOG00000013117) #18 SLFN5 (ENSCPOG00000011027) #19 PEX12 (ENSCPOG00000039161) #21 ENSCPOG00000010238 #22 RASL10B (ENSCPOG00000031497) #23 ENSCPOG00000036328 C17orf50 (ENSCPOG00000019600) #25 MMP28 (ENSCPOG00000031764) #26 ENSCPOG00000040326 #27 HEATR9 (ENSCPOG00000010117) #28 ENSCPOG00000008852 #29 CCL14 (ENSCPOG00000035450) ##33 ENSCPOG00000039417 #31 ENSCPOG00000026400 #32 ENSCPOG00000037138 ##33 ENSCPOG00000033663 ##33 ENSCPOG00000032867 #33 ENSCPOG00000035230 ENSCPOG00000036860 #34 Guinea pig MODERN SPECIES 163 FAM169A (ENSCPOG00000025740) NSA2 (ENSCPOG00000030702) GFM2 (ENSCPOG00000006332) HEXB (ENSCPOG00000006324) ENSCPOG00000023166 #22 ENC1 (ENSCPOG00000004353) ARHGEF28 (ENSCPOG00000006680) UTP15 (ENSCPOG00000006669) ANKRA2 (ENSCPOG00000006571) ENSCPOG00000012832 ENSCPOG00000035195 TMEM174 (ENSCPOG00000002881) TMEM171 (ENSCPOG00000019983) FCHO2 (ENSCPOG00000005442) TNPO1 (ENSCPOG00000003540) ENSCPOG00000020216 Hystricomorpha_b ANCESTRAL SPECIES ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT01100000264661 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT01100000263482.C.c.b.a.a ##33 ENSGT01100000263482.C.c.b.b.b ##33 ENSGT01100000263482.C.c.a #33 ENSGT00940000166945 ENSGT00520000060616 #34 ENSGT00390000016675 #35 Long-tailed chinchilla MODERN SPECIES 188 ENSCLAG00000005107 #8 ENSCLAG00000006411 #9 TMEM132E (ENSCLAG00000006946) #10 CCT6B (ENSCLAG00000014724) #11 ZNF830 (ENSCLAG00000017672) #12 LIG3 (ENSCLAG00000009138) #13 RFFL (ENSCLAG00000010681) #14 RAD51D (ENSCLAG00000004975) #15 FNDC8 (ENSCLAG00000006982) #16 NLE1 (ENSCLAG00000008143) #17 UNC45B (ENSCLAG00000013212) #18 ENSCLAG00000008166 ##20 ENSCLAG00000017329 ##20 SLFN14 (ENSCLAG00000004969) #20 PEX12 (ENSCLAG00000006085) #21 AP2B1 (ENSCLAG00000009660) #22 RASL10B (ENSCLAG00000016447) #23 GAS2L2 (ENSCLAG00000010014) #24 C17orf50 (ENSCLAG00000011018) #25 MMP28 (ENSCLAG00000012449) #26 TAF15 (ENSCLAG00000008940) #27 HEATR9 (ENSCLAG00000010061) #28 ENSCLAG00000015541 #29 ENSCLAG00000014715 ENSCLAG00000007121 #31 ENSCLAG00000007367 ##33 Degu MODERN SPECIES 205 ENSODEG00000013102 SLFN14 (ENSODEG00000012242) #20 ENSODEG00000013257 AP2B1 (ENSODEG00000013913) #22 RASL10B (ENSODEG00000012407) #23 ENSODEG00000012204 C17orf50 (ENSODEG00000012668) #25 MMP28 (ENSODEG00000016303) #26 ENSODEG00000012915 #27 HEATR9 (ENSODEG00000012621) #28 ENSODEG00000012792 #29 ENSODEG00000013298 ENSODEG00000013395 #33 ENSODEG00000013198 ##33 ENSODEG00000013480 #33 ENSODEG00000013109 HEATR6 (ENSODEG00000013428) #35 HNF1B (ENSODEG00000012709) #36 ENSODEG00000012382 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 12 ASIC2 (ENSHGLG00000000958) CCL2 (ENSHGLG00000034308) #8 CCL11 (ENSHGLG00000001015) ##33 ENSHGLG00000001025 ##33 ENSHGLG00000042122 #9 Lig3 (ENSHGLG00000001349) #13 ENSHGLG00000001734 #14 RAD51D (ENSHGLG00000001857) #15 FNDC8 (ENSHGLG00000001963) #16 NLE1 (ENSHGLG00000002006) #17 UNC45B (ENSHGLG00000002117) #18 ENSHGLG00000039133 SLFN14 (ENSHGLG00000002313) #20 ENSHGLG00000019904 PEX12 (ENSHGLG00000044826) #21 AP2B1 (ENSHGLG00000002411) #22 RASL10B (ENSHGLG00000038176) #23 ENSHGLG00000005151 ENSHGLG00000036876 #25 ENSHGLG00000040978 #26 ENSHGLG00000005292 #27 ENSHGLG00000005395 #29 ENSHGLG00000047538 ##33 ENSHGLG00000036900 ##33 ENSHGLG00000050713 #31 CCL15 (ENSHGLG00000006092) #31 ENSHGLG00000006414 ##33 ENSHGLG00000036724 #32 ENSHGLG00000007508 OMG (ENSHGLG00000038199) EVI2B (ENSHGLG00000043351) Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000033530 ENSHGLG00000002303 ENSHGLG00000002529 SMIM18 (ENSHGLG00000002636) ENSHGLG00000039655 ENSHGLG00000039496 GSR (ENSHGLG00000008420) ENSHGLG00000050810 ENSHGLG00000047725 UBXN8 (ENSHGLG00000037756) PPP2CB (ENSHGLG00000004398) TEX15 (ENSHGLG00000040015) ENSHGLG00000046666 PURG (ENSHGLG00000003706) WRN (ENSHGLG00000003638) ENSHGLG00000003390 #22 NRG1 (ENSHGLG00000004920) FUT10 (ENSHGLG00000003149) ENSHGLG00000004478 MAK16 (ENSHGLG00000002981) TTI2 (ENSHGLG00000002506) RNF122 (ENSHGLG00000035559) DUSP26 (ENSHGLG00000012175) ENSHGLG00000036058 UNC5D (ENSHGLG00000009719) ENSHGLG00000037018 KCNU1 (ENSHGLG00000015824) ENSHGLG00000007555 ZNF703 (ENSHGLG00000010999) ERLIN2 (ENSHGLG00000035041) PROSC (ENSHGLG00000041569) Sciuridae ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.c.a #8 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.b #19 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 Marmotini ANCESTRAL SPECIES 8 ENSGT00410000025651.A.b.a.a.b ##20 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT00390000010003.ab ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00520000060616 #34 Alpin marmot MODERN SPECIES 42 ENSMMMG00000018715 ##20 SLFN13 (ENSMMMG00000018719) ##20 SLFN14 (ENSMMMG00000018767) #20 PEX12 (ENSMMMG00000018771) #21 AP2B1 (ENSMMMG00000018789) #22 RASL10B (ENSMMMG00000018941) #23 ENSMMMG00000018962 C17orf50 (ENSMMMG00000018963) #25 MMP28 (ENSMMMG00000018988) #26 TAF15 (ENSMMMG00000019003) #27 HEATR9 (ENSMMMG00000019012) #28 ENSMMMG00000019031 #29 CCL16 (ENSMMMG00000019034) ##33 CCL14 (ENSMMMG00000019039) ##33 ENSMMMG00000019047 #31 ENSMMMG00000019053 ENSMMMG00000019056 ENSMMMG00000019060 #32 ENSMMMG00000019088 ENSMMMG00000019090 #32 Marmotini_b ANCESTRAL SPECIES 5 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT01100000263482.C.c.b.a.b.a #31 ENSGT00390000010003.ab ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT01100000263482.C.c.a #33 ENSGT00520000060616 #34 Arctic ground squirrel MODERN SPECIES 742 PEX12 (ENSUPAG00010017569) #21 AP2B1 (ENSUPAG00010017425) #22 RASL10B (ENSUPAG00010017401) #23 ENSUPAG00010017391 ENSUPAG00010017381 C17orf50 (ENSUPAG00010017373) #25 MMP28 (ENSUPAG00010017333) #26 TAF15 (ENSUPAG00010017298) #27 HEATR9 (ENSUPAG00010017281) #28 ENSUPAG00010017272 #29 CCL16 (ENSUPAG00010017264) ##33 CCL14 (ENSUPAG00010017262) ##33 ENSUPAG00010017258 #31 ENSUPAG00010017252 ##33 ENSUPAG00010017172 #32 ENSUPAG00010017167 ENSUPAG00010017158 Squirrel MODERN SPECIES 90 PEX12 (ENSSTOG00000025573) #21 AP2B1 (ENSSTOG00000002031) #22 RASL10B (ENSSTOG00000021097) #23 ENSSTOG00000032802 C17orf50 (ENSSTOG00000029437) #25 MMP28 (ENSSTOG00000020743) #26 TAF15 (ENSSTOG00000002081) #27 HEATR9 (ENSSTOG00000028751) #28 ENSSTOG00000015833 #29 CCL14 (ENSSTOG00000033490) ##33 ENSSTOG00000034887 #31 ENSSTOG00000027899 #32 ENSSTOG00000031610 ENSSTOG00000027458 #32 ENSSTOG00000013313 #33 ENSSTOG00000032858 #34 HEATR6 (ENSSTOG00000026901) #35 Eurasian red squirrel MODERN SPECIES 12 CCT6B (ENSSVLG00005012972) #11 ZNF830 (ENSSVLG00005012926) #12 LIG3 (ENSSVLG00005012872) #13 RFFL (ENSSVLG00005012713) #14 RAD51D (ENSSVLG00005012550) #15 FNDC8 (ENSSVLG00005012462) #16 NLE1 (ENSSVLG00005012107) #17 UNC45B (ENSSVLG00005011413) #18 ENSSVLG00005011336 #19 ENSSVLG00005011301 ENSSVLG00005011281 #19 ENSSVLG00005011264 #19 SLFN13 (ENSSVLG00005011190) ##20 SLFN14 (ENSSVLG00005011129) #20 PEX12 (ENSSVLG00005011091) #21 AP2B1 (ENSSVLG00005010470) #22 RASL10B (ENSSVLG00005010407) #23 GAS2L2 (ENSSVLG00005010308) #24 C17orf50 (ENSSVLG00005010248) #25 MMP28 (ENSSVLG00005010157) #26 TAF15 (ENSSVLG00005010110) #27 HEATR9 (ENSSVLG00005009904) #28 ENSSVLG00005009862 #29 CCL16 (ENSSVLG00005009830) ##33 CCL14 (ENSSVLG00005009782) ##33 ENSSVLG00005009747 #31 ENSSVLG00005009720 ENSSVLG00005009611 #32 ENSSVLG00005009573 #32 ENSSVLG00005009477 #33 ENSSVLG00005009438 Lagomorpha ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.c.a #8 ENSGT01100000263482.F ##33 ENSGT01030000234760 #9 ENSGT00940000158479 #10 ENSGT00940000156339 #11 ENSGT00390000012151 #12 ENSGT00940000156492 #13 ENSGT00390000012719.a #14 ENSGT00940000159095 #15 ENSGT00390000006458 #16 ENSGT00940000157881 #17 ENSGT00940000157654 #18 ENSGT00410000025651.A.b.a.a.a.a ##20 ENSGT00410000025651.A.b.b #20 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B ##33 ENSGT01100000263482.C.c.b.a.b.b ##33 ENSGT00940000165476.b ENSGT01100000263482.C.c.b.b.a.b #32 ENSGT00940000165089 ENSGT00520000060616 #34 ENSGT00390000016675 #35 ENSGT00940000153818.a.b.a.b #36 Rabbit MODERN SPECIES 10 ENSOCUG00000030195 ENSOCUG00000013412 #8 ENSOCUG00000013416 #9 TMEM132E (ENSOCUG00000012159) #10 CCT6B (ENSOCUG00000012343) #11 ZNF830 (ENSOCUG00000012351) #12 LIG3 (ENSOCUG00000006305) #13 RFFL (ENSOCUG00000006315) #14 ENSOCUG00000014300 #15 FNDC8 (ENSOCUG00000014306) #16 NLE1 (ENSOCUG00000014310) #17 UNC45B (ENSOCUG00000026443) #18 SLFN13 (ENSOCUG00000003504) ##20 SLFN14 (ENSOCUG00000006884) #20 PEX12 (ENSOCUG00000004058) #21 AP2B1 (ENSOCUG00000004060) #22 RASL10B (ENSOCUG00000004080) #23 GAS2L2 (ENSOCUG00000004081) #24 C17orf50 (ENSOCUG00000004084) #25 MMP28 (ENSOCUG00000004089) #26 TAF15 (ENSOCUG00000002838) #27 HEATR9 (ENSOCUG00000002842) #28 ENSOCUG00000002848 #29 CCL14 (ENSOCUG00000002849) ##33 ENSOCUG00000000686 ENSOCUG00000000771 #32 ENSOCUG00000026206 ENSOCUG00000036945 #34 HEATR6 (ENSOCUG00000003690) #35 HNF1B (ENSOCUG00000003682) #36 DDX52 (ENSOCUG00000014532) #37 Pika MODERN SPECIES 3093 ENSOPRG00000011707 #11 LIG3 (ENSOPRG00000011746) #13 RFFL (ENSOPRG00000011769) #14 RAD51D (ENSOPRG00000011777) #15 FNDC8 (ENSOPRG00000011794) #16 NLE1 (ENSOPRG00000011799) #17 UNC45B (ENSOPRG00000011826) #18 ENSOPRG00000011856 ##20 PEX12 (ENSOPRG00000011876) #21 AP2B1 (ENSOPRG00000011887) #22 RASL10B (ENSOPRG00000011920) #23 ENSOPRG00000011930 C17orf50 (ENSOPRG00000011951) #25 MMP28 (ENSOPRG00000011967) #26 HEATR9 (ENSOPRG00000011985) #28 ENSOPRG00000012010 #29 ENSOPRG00000012019 ##33 CCL14 (ENSOPRG00000018376) ##33 ENSOPRG00000012033 ENSOPRG00000012047 ENSOPRG00000012051