Euarchontoglires ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.b.b.a.a ##30 Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 Glires ANCESTRAL SPECIES 3 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #35 Rodentia ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #35 Rodentia_A ANCESTRAL SPECIES 3 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000165476 ENSGT00960000187851 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00550000074863 Sciuridae ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 Marmotini ANCESTRAL SPECIES 8 ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00390000010003.ab #36 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00520000060616 Marmotini_b ANCESTRAL SPECIES 5 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT01060000250264 #24 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00390000010003.ab #36 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00520000060616 Arctic ground squirrel MODERN SPECIES 742 PEX12 (ENSUPAG00010017569) #21 AP2B1 (ENSUPAG00010017425) #22 RASL10B (ENSUPAG00010017401) #23 ENSUPAG00010017391 #24 ENSUPAG00010017381 #25 C17orf50 (ENSUPAG00010017373) #26 MMP28 (ENSUPAG00010017333) #27 TAF15 (ENSUPAG00010017298) #28 HEATR9 (ENSUPAG00010017281) #29 ENSUPAG00010017272 #30 CCL16 (ENSUPAG00010017264) #31 CCL14 (ENSUPAG00010017262) #32 ENSUPAG00010017258 #33 ENSUPAG00010017252 #34 ENSUPAG00010017172 #35 ENSUPAG00010017167 #36 ENSUPAG00010017158 #37 Squirrel MODERN SPECIES 90 PEX12 (ENSSTOG00000025573) #21 AP2B1 (ENSSTOG00000002031) #22 RASL10B (ENSSTOG00000021097) #23 ENSSTOG00000032802 #25 C17orf50 (ENSSTOG00000029437) #26 MMP28 (ENSSTOG00000020743) #27 TAF15 (ENSSTOG00000002081) #28 HEATR9 (ENSSTOG00000028751) #29 ENSSTOG00000015833 #30 CCL14 (ENSSTOG00000033490) #32 ENSSTOG00000034887 #33 ENSSTOG00000027899 #35 ENSSTOG00000031610 #36 ENSSTOG00000027458 #35 ENSSTOG00000013313 ##30 ENSSTOG00000032858 HEATR6 (ENSSTOG00000026901) Alpin marmot MODERN SPECIES 42 ENSMMMG00000018715 SLFN13 (ENSMMMG00000018719) SLFN14 (ENSMMMG00000018767) PEX12 (ENSMMMG00000018771) #21 AP2B1 (ENSMMMG00000018789) #22 RASL10B (ENSMMMG00000018941) #23 ENSMMMG00000018962 #25 C17orf50 (ENSMMMG00000018963) #26 MMP28 (ENSMMMG00000018988) #27 TAF15 (ENSMMMG00000019003) #28 HEATR9 (ENSMMMG00000019012) #29 ENSMMMG00000019031 #30 CCL16 (ENSMMMG00000019034) #31 CCL14 (ENSMMMG00000019039) #32 ENSMMMG00000019047 #33 ENSMMMG00000019053 ENSMMMG00000019056 ENSMMMG00000019060 #35 ENSMMMG00000019088 #36 ENSMMMG00000019090 #35 Eurasian red squirrel MODERN SPECIES 12 CCT6B (ENSSVLG00005012972) ZNF830 (ENSSVLG00005012926) LIG3 (ENSSVLG00005012872) RFFL (ENSSVLG00005012713) RAD51D (ENSSVLG00005012550) FNDC8 (ENSSVLG00005012462) NLE1 (ENSSVLG00005012107) UNC45B (ENSSVLG00005011413) ENSSVLG00005011336 ENSSVLG00005011301 ENSSVLG00005011281 ENSSVLG00005011264 SLFN13 (ENSSVLG00005011190) SLFN14 (ENSSVLG00005011129) PEX12 (ENSSVLG00005011091) #21 AP2B1 (ENSSVLG00005010470) #22 RASL10B (ENSSVLG00005010407) #23 GAS2L2 (ENSSVLG00005010308) C17orf50 (ENSSVLG00005010248) #26 MMP28 (ENSSVLG00005010157) #27 TAF15 (ENSSVLG00005010110) #28 HEATR9 (ENSSVLG00005009904) #29 ENSSVLG00005009862 #30 CCL16 (ENSSVLG00005009830) #31 CCL14 (ENSSVLG00005009782) #32 ENSSVLG00005009747 #33 ENSSVLG00005009720 ENSSVLG00005009611 #35 ENSSVLG00005009573 #35 ENSSVLG00005009477 ##30 ENSSVLG00005009438 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000154849.a #25 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.b.b.b #34 ENSGT01100000263482.C.c.a ##30 ENSGT00940000166945 Hystricomorpha_a ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000154849.a #25 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.b #34 ENSGT01100000263482.C.c.a ##30 ENSGT00940000166945 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Guinea pig DUPLICATION Guinea pig MODERN SPECIES 32 ENSCPOG00000013468 ##30 CCL7 (ENSCPOG00000013035) ##30 CCL11 (ENSCPOG00000032138) ##30 ENSCPOG00000033402 ##30 TMEM132E (ENSCPOG00000001908) CCT6B (ENSCPOG00000002794) ZNF830 (ENSCPOG00000031218) LIG3 (ENSCPOG00000013032) RFFL (ENSCPOG00000022966) RAD51D (ENSCPOG00000025259) FNDC8 (ENSCPOG00000020325) NLE1 (ENSCPOG00000013116) UNC45B (ENSCPOG00000013117) SLFN5 (ENSCPOG00000011027) PEX12 (ENSCPOG00000039161) #21 ENSCPOG00000010238 #22 RASL10B (ENSCPOG00000031497) #23 ENSCPOG00000036328 #25 C17orf50 (ENSCPOG00000019600) #26 MMP28 (ENSCPOG00000031764) #27 ENSCPOG00000040326 #28 HEATR9 (ENSCPOG00000010117) #29 ENSCPOG00000008852 #30 CCL14 (ENSCPOG00000035450) #32 ENSCPOG00000039417 #33 ENSCPOG00000026400 #35 ENSCPOG00000037138 #34 ENSCPOG00000033663 #34 ENSCPOG00000032867 ##30 ENSCPOG00000035230 ENSCPOG00000036860 Guinea pig MODERN SPECIES 163 FAM169A (ENSCPOG00000025740) NSA2 (ENSCPOG00000030702) GFM2 (ENSCPOG00000006332) HEXB (ENSCPOG00000006324) ENSCPOG00000023166 #22 ENC1 (ENSCPOG00000004353) ARHGEF28 (ENSCPOG00000006680) UTP15 (ENSCPOG00000006669) ANKRA2 (ENSCPOG00000006571) ENSCPOG00000012832 ENSCPOG00000035195 TMEM174 (ENSCPOG00000002881) TMEM171 (ENSCPOG00000019983) FCHO2 (ENSCPOG00000005442) TNPO1 (ENSCPOG00000003540) ENSCPOG00000020216 Hystricomorpha_b ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT01100000264661 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.b #34 ENSGT01100000263482.C.c.a ##30 ENSGT00940000166945 ENSGT00520000060616 ENSGT00390000016675 Long-tailed chinchilla MODERN SPECIES 188 ENSCLAG00000005107 ##30 ENSCLAG00000006411 TMEM132E (ENSCLAG00000006946) CCT6B (ENSCLAG00000014724) ZNF830 (ENSCLAG00000017672) LIG3 (ENSCLAG00000009138) RFFL (ENSCLAG00000010681) RAD51D (ENSCLAG00000004975) FNDC8 (ENSCLAG00000006982) NLE1 (ENSCLAG00000008143) UNC45B (ENSCLAG00000013212) ENSCLAG00000008166 ENSCLAG00000017329 SLFN14 (ENSCLAG00000004969) PEX12 (ENSCLAG00000006085) #21 AP2B1 (ENSCLAG00000009660) #22 RASL10B (ENSCLAG00000016447) #23 GAS2L2 (ENSCLAG00000010014) C17orf50 (ENSCLAG00000011018) #26 MMP28 (ENSCLAG00000012449) #27 TAF15 (ENSCLAG00000008940) #28 HEATR9 (ENSCLAG00000010061) #29 ENSCLAG00000015541 #30 ENSCLAG00000014715 ENSCLAG00000007121 #33 ENSCLAG00000007367 ##30 Degu MODERN SPECIES 205 ENSODEG00000013102 SLFN14 (ENSODEG00000012242) ENSODEG00000013257 AP2B1 (ENSODEG00000013913) #22 RASL10B (ENSODEG00000012407) #23 ENSODEG00000012204 #25 C17orf50 (ENSODEG00000012668) #26 MMP28 (ENSODEG00000016303) #27 ENSODEG00000012915 #28 HEATR9 (ENSODEG00000012621) #29 ENSODEG00000012792 #30 ENSODEG00000013298 ENSODEG00000013395 ##30 ENSODEG00000013198 #34 ENSODEG00000013480 ##30 ENSODEG00000013109 HEATR6 (ENSODEG00000013428) HNF1B (ENSODEG00000012709) ENSODEG00000012382 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 12 ASIC2 (ENSHGLG00000000958) CCL2 (ENSHGLG00000034308) ##30 CCL11 (ENSHGLG00000001015) ##30 ENSHGLG00000001025 ##30 ENSHGLG00000042122 Lig3 (ENSHGLG00000001349) ENSHGLG00000001734 RAD51D (ENSHGLG00000001857) FNDC8 (ENSHGLG00000001963) NLE1 (ENSHGLG00000002006) UNC45B (ENSHGLG00000002117) ENSHGLG00000039133 SLFN14 (ENSHGLG00000002313) ENSHGLG00000019904 PEX12 (ENSHGLG00000044826) #21 AP2B1 (ENSHGLG00000002411) #22 RASL10B (ENSHGLG00000038176) #23 ENSHGLG00000005151 #25 ENSHGLG00000036876 #26 ENSHGLG00000040978 #27 ENSHGLG00000005292 #28 ENSHGLG00000005395 #30 ENSHGLG00000047538 #31 ENSHGLG00000036900 #32 ENSHGLG00000050713 #33 CCL15 (ENSHGLG00000006092) #33 ENSHGLG00000006414 ##30 ENSHGLG00000036724 #35 ENSHGLG00000007508 OMG (ENSHGLG00000038199) EVI2B (ENSHGLG00000043351) Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000033530 ENSHGLG00000002303 ENSHGLG00000002529 SMIM18 (ENSHGLG00000002636) ENSHGLG00000039655 ENSHGLG00000039496 GSR (ENSHGLG00000008420) ENSHGLG00000050810 ENSHGLG00000047725 UBXN8 (ENSHGLG00000037756) PPP2CB (ENSHGLG00000004398) TEX15 (ENSHGLG00000040015) ENSHGLG00000046666 PURG (ENSHGLG00000003706) WRN (ENSHGLG00000003638) ENSHGLG00000003390 #22 NRG1 (ENSHGLG00000004920) FUT10 (ENSHGLG00000003149) ENSHGLG00000004478 MAK16 (ENSHGLG00000002981) TTI2 (ENSHGLG00000002506) RNF122 (ENSHGLG00000035559) DUSP26 (ENSHGLG00000012175) ENSHGLG00000036058 UNC5D (ENSHGLG00000009719) ENSHGLG00000037018 KCNU1 (ENSHGLG00000015824) ENSHGLG00000007555 ZNF703 (ENSHGLG00000010999) ERLIN2 (ENSHGLG00000035041) PROSC (ENSHGLG00000041569) Rodentia_B ANCESTRAL SPECIES 1 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Myomorpha ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Muroidea ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Cricetidae ANCESTRAL SPECIES ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.e ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Cricetidae_B ANCESTRAL SPECIES ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.e ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Northern American deer mouse MODERN SPECIES 21 Tmem132e (ENSPEMG00000016046) Cct6b (ENSPEMG00000022000) Zfp830 (ENSPEMG00000024107) Lig3 (ENSPEMG00000021826) Rffl (ENSPEMG00000023690) Rad51d (ENSPEMG00000022893) Fndc8 (ENSPEMG00000012327) Nle1 (ENSPEMG00000023993) Unc45b (ENSPEMG00000008983) Slfn5 (ENSPEMG00000021448) Slfn9 (ENSPEMG00000010005) ENSPEMG00000024894 ENSPEMG00000010010 Slfn14 (ENSPEMG00000012902) Pex12 (ENSPEMG00000030925) #21 Ap2b1 (ENSPEMG00000018294) #22 Rasl10b (ENSPEMG00000027697) #23 Gas2l2 (ENSPEMG00000018233) 1700020L24Rik (ENSPEMG00000013417) #26 Mmp28 (ENSPEMG00000019080) #27 Taf15 (ENSPEMG00000018715) #28 Heatr9 (ENSPEMG00000009167) #29 Ccl5 (ENSPEMG00000008561) #30 Ccl9 (ENSPEMG00000028232) #33 Ccl6 (ENSPEMG00000008169) #33 Ccl3 (ENSPEMG00000028000) #35 ENSPEMG00000030825 ##30 ENSPEMG00000026681 ENSPEMG00000027305 ##30 ENSPEMG00000025016 ##30 ENSPEMG00000028019 ##30 Prairie vole MODERN SPECIES 15 Tmem132e (ENSMOCG00000017883) Cct6b (ENSMOCG00000015382) Zfp830 (ENSMOCG00000002661) Lig3 (ENSMOCG00000013887) Rffl (ENSMOCG00000005235) Rad51d (ENSMOCG00000019246) Fndc8 (ENSMOCG00000016181) Nle1 (ENSMOCG00000005383) Unc45b (ENSMOCG00000016526) Slfn5 (ENSMOCG00000010517) ENSMOCG00000018543 Slfn2 (ENSMOCG00000021779) Slfn1 (ENSMOCG00000005408) Slfn14 (ENSMOCG00000008378) Pex12 (ENSMOCG00000016233) #21 Ap2b1 (ENSMOCG00000014475) #22 Rasl10b (ENSMOCG00000001964) #23 Gas2l2 (ENSMOCG00000005581) 1700020L24Rik (ENSMOCG00000019897) #26 Mmp28 (ENSMOCG00000018460) #27 Taf15 (ENSMOCG00000015121) #28 Heatr9 (ENSMOCG00000009616) #29 Ccl5 (ENSMOCG00000020386) #30 ENSMOCG00000002418 ENSMOCG00000012772 ENSMOCG00000013583 #35 Ccl4 (ENSMOCG00000012149) ##30 ENSMOCG00000013687 ENSMOCG00000016372 Wfdc21 (ENSMOCG00000019007) Heatr6 (ENSMOCG00000015431) Cricetinae ANCESTRAL SPECIES ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000165476.d ENSGT00940000165476.c ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.e ENSGT00530000064879.f ENSGT00520000060616 Golden Hamster MODERN SPECIES 684 ENSMAUG00000013646 ##30 Tmem132e (ENSMAUG00000016009) Cct6b (ENSMAUG00000001673) Zfp830 (ENSMAUG00000012194) Lig3 (ENSMAUG00000020082) Rffl (ENSMAUG00000003967) Rad51d (ENSMAUG00000009497) Fndc8 (ENSMAUG00000016080) Nle1 (ENSMAUG00000016623) Unc45b (ENSMAUG00000011322) ENSMAUG00000009126 Slfn9 (ENSMAUG00000013430) Slfn1 (ENSMAUG00000003013) Slfn14 (ENSMAUG00000020439) Pex12 (ENSMAUG00000004768) #21 Ap2b1 (ENSMAUG00000021295) #22 Rasl10b (ENSMAUG00000011536) #23 Gas2l2 (ENSMAUG00000001264) ENSMAUG00000018386 #28 Heatr9 (ENSMAUG00000019408) #29 Ccl5 (ENSMAUG00000000781) #30 ENSMAUG00000021412 ENSMAUG00000015635 Ccl3 (ENSMAUG00000021167) #35 Ccl4 (ENSMAUG00000020742) ##30 ENSMAUG00000009975 Wfdc21 (ENSMAUG00000018673) Heatr6 (ENSMAUG00000009627) Hnf1b (ENSMAUG00000009573) ENSMAUG00000007943 Ddx52 (ENSMAUG00000021084) Chinese hamster chok1gshd MODERN SPECIES 33 Cct6b (ENSCGRG00001020850) Zfp830 (ENSCGRG00001003631) Lig3 (ENSCGRG00001004370) Rffl (ENSCGRG00001019316) Rad51d (ENSCGRG00001012167) Fndc8 (ENSCGRG00001013060) Nle1 (ENSCGRG00001009877) Unc45b (ENSCGRG00001022400) Slfn5 (ENSCGRG00001016905) Slfn9 (ENSCGRG00001021962) Slfn2 (ENSCGRG00001022663) Slfn1 (ENSCGRG00001009249) ENSCGRG00001019431 Slfn14 (ENSCGRG00001017464) Pex12 (ENSCGRG00001019900) #21 Ap2b1 (ENSCGRG00001020053) #22 Rasl10b (ENSCGRG00001010269) #23 Gas2l2 (ENSCGRG00001022937) 1700020L24Rik (ENSCGRG00001006404) #26 Mmp28 (ENSCGRG00001013370) #27 Taf15 (ENSCGRG00001012011) #28 Heatr9 (ENSCGRG00001019308) #29 Ccl5 (ENSCGRG00001017129) #30 ENSCGRG00001017750 Ccl6 (ENSCGRG00001008290) #33 Ccl3 (ENSCGRG00001019421) #35 Ccl4 (ENSCGRG00001020791) ##30 ENSCGRG00001018407 ENSCGRG00001019205 Wfdc21 (ENSCGRG00001020449) Heatr6 (ENSCGRG00001000753) Murinae ANCESTRAL SPECIES 6 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mus ANCESTRAL SPECIES 2 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b.b ENSGT00410000025651.A.b.a.a.b.e.b.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mouse MODERN SPECIES 2 Lig3 (ENSMUSG00000020697) Rffl (ENSMUSG00000020696) Rad51d (ENSMUSG00000018841) Fndc8 (ENSMUSG00000018844) Nle1 (ENSMUSG00000020692) Unc45b (ENSMUSG00000018845) Slfn5 (ENSMUSG00000054404) Slfn9 (ENSMUSG00000069793) Slfn8 (ENSMUSG00000035208) Slfn2 (ENSMUSG00000072620) Slfn1 (ENSMUSG00000078763) Slfn4 (ENSMUSG00000000204) Slfn3 (ENSMUSG00000018986) Slfn14 (ENSMUSG00000082101) Pex12 (ENSMUSG00000018733) #21 Ap2b1 (ENSMUSG00000035152) #22 Rasl10b (ENSMUSG00000020684) #23 Gas2l2 (ENSMUSG00000020686) 1700020L24Rik (ENSMUSG00000035085) #26 Mmp28 (ENSMUSG00000020682) #27 Taf15 (ENSMUSG00000020680) #28 Heatr9 (ENSMUSG00000018925) #29 Ccl5 (ENSMUSG00000035042) #30 Ccl9 (ENSMUSG00000019122) #33 Ccl6 (ENSMUSG00000018927) #33 Ccl3 (ENSMUSG00000000982) #35 Ccl4 (ENSMUSG00000018930) ##30 Wfdc17 (ENSMUSG00000069792) Wfdc18 (ENSMUSG00000000983) Wfdc21 (ENSMUSG00000051748) Heatr6 (ENSMUSG00000000976) Mus_C ANCESTRAL SPECIES 3 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.e.a ENSGT00410000025651.A.b.a.a.b.f ENSGT00410000025651.A.b.a.a.b.e.b.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.C.c.b.a.b.a.m #33 ENSGT01100000263482.C.c.b.a.b.a.n #33 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Steppe mouse MODERN SPECIES 3305 ENSMSIG00000012844 Slfn14 (ENSMSIG00000012821) Pex12 (ENSMSIG00000012790) #21 Ap2b1 (ENSMSIG00000012708) #22 Rasl10b (ENSMSIG00000012687) #23 Gas2l2 (ENSMSIG00000012668) 1700020L24Rik (ENSMSIG00000012643) #26 Mmp28 (ENSMSIG00000012526) #27 Taf15 (ENSMSIG00000012461) #28 Heatr9 (ENSMSIG00000012418) #29 Ccl5 (ENSMSIG00000012408) #30 Ccl9 (ENSMSIG00000012396) #33 Ccl6 (ENSMSIG00000012387) #33 Ccl3 (ENSMSIG00000012367) #35 Ccl4 (ENSMSIG00000012352) ##30 ENSMSIG00000012344 ENSMSIG00000012332 ENSMSIG00000012323 Wfdc17 (ENSMSIG00000012316) spretus MODERN SPECIES 2 Lig3 (MGP_SPRETEiJ_G0017700) Rffl (MGP_SPRETEiJ_G0017701) Rad51d (MGP_SPRETEiJ_G0017702) Fndc8 (MGP_SPRETEiJ_G0017703) Nle1 (MGP_SPRETEiJ_G0017704) Unc45b (MGP_SPRETEiJ_G0017705) Slfn5 (MGP_SPRETEiJ_G0017706) MGP_SPRETEiJ_G0017707 MGP_SPRETEiJ_G0017708 Slfn2 (MGP_SPRETEiJ_G0017709) Slfn1 (MGP_SPRETEiJ_G0017710) MGP_SPRETEiJ_G0017711 MGP_SPRETEiJ_G0017712 Slfn14 (MGP_SPRETEiJ_G0017713) Pex12 (MGP_SPRETEiJ_G0017714) #21 Ap2b1 (MGP_SPRETEiJ_G0017715) #22 Rasl10b (MGP_SPRETEiJ_G0017716) #23 Gas2l2 (MGP_SPRETEiJ_G0017717) 1700020L24Rik (MGP_SPRETEiJ_G0017718) #26 Mmp28 (MGP_SPRETEiJ_G0017719) #27 Taf15 (MGP_SPRETEiJ_G0017720) #28 Heatr9 (MGP_SPRETEiJ_G0017721) #29 Ccl5 (MGP_SPRETEiJ_G0017722) #30 Ccl9 (MGP_SPRETEiJ_G0017723) #33 Ccl6 (MGP_SPRETEiJ_G0017724) #33 MGP_SPRETEiJ_G0017725 Ccl3 (MGP_SPRETEiJ_G0017726) #35 Ccl4 (MGP_SPRETEiJ_G0017727) ##30 Wfdc17 (MGP_SPRETEiJ_G0017728) Wfdc18 (MGP_SPRETEiJ_G0017729) Wfdc21 (MGP_SPRETEiJ_G0017730) Ryukyu mouse MODERN SPECIES 2 Lig3 (MGP_CAROLIEiJ_G0016856) Rffl (MGP_CAROLIEiJ_G0016857) Rad51d (MGP_CAROLIEiJ_G0016858) Fndc8 (MGP_CAROLIEiJ_G0016859) Nle1 (MGP_CAROLIEiJ_G0016860) Unc45b (MGP_CAROLIEiJ_G0016861) MGP_CAROLIEiJ_G0016862 MGP_CAROLIEiJ_G0016863 MGP_CAROLIEiJ_G0016864 Slfn2 (MGP_CAROLIEiJ_G0016865) Slfn1 (MGP_CAROLIEiJ_G0016866) MGP_CAROLIEiJ_G0016867 MGP_CAROLIEiJ_G0016868 Slfn14 (MGP_CAROLIEiJ_G0016869) Pex12 (MGP_CAROLIEiJ_G0016870) #21 Ap2b1 (MGP_CAROLIEiJ_G0016871) #22 Rasl10b (MGP_CAROLIEiJ_G0016872) #23 Gas2l2 (MGP_CAROLIEiJ_G0016873) 1700020L24Rik (MGP_CAROLIEiJ_G0016874) #26 Mmp28 (MGP_CAROLIEiJ_G0016875) #27 Taf15 (MGP_CAROLIEiJ_G0016876) #28 Heatr9 (MGP_CAROLIEiJ_G0016877) #29 Ccl5 (MGP_CAROLIEiJ_G0016878) #30 Ccl9 (MGP_CAROLIEiJ_G0016879) #33 Ccl6 (MGP_CAROLIEiJ_G0016880) #33 Ccl3 (MGP_CAROLIEiJ_G0016881) #35 Ccl4 (MGP_CAROLIEiJ_G0016882) ##30 Wfdc17 (MGP_CAROLIEiJ_G0016883) Wfdc18 (MGP_CAROLIEiJ_G0016884) Wfdc21 (MGP_CAROLIEiJ_G0016885) Heatr6 (MGP_CAROLIEiJ_G0016886) Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0017987 ##30 MGP_PahariEiJ_G0017988 ##30 Ccl1 (MGP_PahariEiJ_G0017989) Tmem132e (MGP_PahariEiJ_G0017990) Cct6b (MGP_PahariEiJ_G0017991) Zfp830 (MGP_PahariEiJ_G0017992) Lig3 (MGP_PahariEiJ_G0017993) Rffl (MGP_PahariEiJ_G0017994) Rad51d (MGP_PahariEiJ_G0017995) Fndc8 (MGP_PahariEiJ_G0017996) Nle1 (MGP_PahariEiJ_G0017997) Unc45b (MGP_PahariEiJ_G0017998) Slfn5 (MGP_PahariEiJ_G0017999) Slfn14 (MGP_PahariEiJ_G0018000) Pex12 (MGP_PahariEiJ_G0018001) #21 Ap2b1 (MGP_PahariEiJ_G0018002) #22 Rasl10b (MGP_PahariEiJ_G0018003) #23 Gas2l2 (MGP_PahariEiJ_G0018004) 1700020L24Rik (MGP_PahariEiJ_G0018005) #26 Mmp28 (MGP_PahariEiJ_G0018006) #27 Taf15 (MGP_PahariEiJ_G0018007) #28 Heatr9 (MGP_PahariEiJ_G0018008) #29 Ccl5 (MGP_PahariEiJ_G0018009) #30 Ccl9 (MGP_PahariEiJ_G0018010) #33 Ccl6 (MGP_PahariEiJ_G0018011) #33 Ccl3 (MGP_PahariEiJ_G0018012) #35 Ccl4 (MGP_PahariEiJ_G0018013) ##30 Wfdc21 (MGP_PahariEiJ_G0018015) Heatr6 (MGP_PahariEiJ_G0018016) Hnf1b (MGP_PahariEiJ_G0018017) Ddx52 (MGP_PahariEiJ_G0018018) Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 8 ENSRNOG00000065594 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) Rat MODERN SPECIES 8 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) H1f2 (ENSRNOG00000067441) Rat DUPLICATION Rat MODERN SPECIES 1 Unc45b (ENSRNOG00000009466) ENSRNOG00000062443 Slfn5 (ENSRNOG00000021719) Slfn13 (ENSRNOG00000021412) ENSRNOG00000063847 LOC108352183 (ENSRNOG00000037114) Slfn2 (ENSRNOG00000037113) Slfn1 (ENSRNOG00000048053) Slfn4 (ENSRNOG00000057092) Slfn4 (ENSRNOG00000063541) LOC688925 (ENSRNOG00000032135) AC118772.2 (ENSRNOG00000021357) ENSRNOG00000062983 AC118772.1 (ENSRNOG00000009709) Pex12 (ENSRNOG00000009718) #21 Ap2b1 (ENSRNOG00000061543) #22 Rasl10b (ENSRNOG00000010302) #23 Gas2l2 (ENSRNOG00000047546) LOC689039 (ENSRNOG00000049757) #26 Mmp28 (ENSRNOG00000047940) #27 Taf15 (ENSRNOG00000058393) #28 Heatr9 (ENSRNOG00000037100) #29 Ccl5 (ENSRNOG00000010906) Ccl9 (ENSRNOG00000028548) #33 Ccl6 (ENSRNOG00000030021) Ccl3 (ENSRNOG00000011205) #35 Ccl4 (ENSRNOG00000011406) ##30 ENSRNOG00000070672 LOC103695128 (ENSRNOG00000051084) LOC100909660 (ENSRNOG00000066869) ENSRNOG00000066744 Rat MODERN SPECIES ENSRNOG00000066169 ENSRNOG00000068667 Zfp273l-ps1 (ENSRNOG00000046353) LOC102551340 (ENSRNOG00000047145) Spry3-ps1 (ENSRNOG00000064505) Zfp748 (ENSRNOG00000069921) LOC102549842 (ENSRNOG00000049259) LOC102547287 (ENSRNOG00000016462) RGD1566325 (ENSRNOG00000017963) ENSRNOG00000068953 Zfp455l1 (ENSRNOG00000042308) Mtrr (ENSRNOG00000017826) Fastkd3 (ENSRNOG00000027422) Cfap90 (ENSRNOG00000047406) Adcy2 (ENSRNOG00000032150) Ap2b1-ps1 (ENSRNOG00000017678) #22 Tent4a (ENSRNOG00000017613) Srd5a1 (ENSRNOG00000017601) Nsun2 (ENSRNOG00000017254) Ube2ql1 (ENSRNOG00000034075) Med10 (ENSRNOG00000017150) Dlat-ps1 (ENSRNOG00000017095) Ice1 (ENSRNOG00000023053) Adamts16 (ENSRNOG00000016812) Irx1 (ENSRNOG00000033609) Irx2 (ENSRNOG00000012742) Irx4 (ENSRNOG00000012720) Ndufs6l1 (ENSRNOG00000062531) Mrpl36 (ENSRNOG00000023407) Lpcat1 (ENSRNOG00000017930) Slc6a3 (ENSRNOG00000017302) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Tmem132e (ENSNGAG00000014402) ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) Zfp830 (ENSNGAG00000014849) Lig3 (ENSNGAG00000019767) Rffl (ENSNGAG00000017708) Rad51d (ENSNGAG00000008118) Fndc8 (ENSNGAG00000019921) Nle1 (ENSNGAG00000012348) Unc45b (ENSNGAG00000000238) Slfn5 (ENSNGAG00000014194) ENSNGAG00000020404 Slfn14 (ENSNGAG00000011735) ENSNGAG00000016398 ENSNGAG00000013242 ENSNGAG00000009444 #22 Rasl10b (ENSNGAG00000002106) #23 ENSNGAG00000019453 #25 1700020L24Rik (ENSNGAG00000019913) #26 Mmp28 (ENSNGAG00000014473) #27 ENSNGAG00000015117 Taf15 (ENSNGAG00000017633) #28 Heatr9 (ENSNGAG00000011711) #29 Ccl5 (ENSNGAG00000003622) #30 ENSNGAG00000006220 Ccl3 (ENSNGAG00000003991) #35 Ccl4 (ENSNGAG00000003228) ##30 ENSNGAG00000017535 Wfdc21 (ENSNGAG00000012983) Heatr6 (ENSNGAG00000016534) Hnf1b (ENSNGAG00000017601) Upper Galilee mountains blind mole rat MODERN SPECIES 1303 Rhou (ENSNGAG00000010199) ENSNGAG00000013788 Rab4a (ENSNGAG00000020318) Ccsap (ENSNGAG00000020516) Acta1 (ENSNGAG00000008844) Nup133 (ENSNGAG00000011857) ENSNGAG00000016124 #22 Abcb10 (ENSNGAG00000005450) Taf5l (ENSNGAG00000013058) Urb2 (ENSNGAG00000016524) ENSNGAG00000000097 Galnt2 (ENSNGAG00000017214) Pgbd5 (ENSNGAG00000016041) ENSNGAG00000013046 Agt (ENSNGAG00000014491) Capn9 (ENSNGAG00000017031) 2310022B05Rik (ENSNGAG00000012261) Ttc13 (ENSNGAG00000013995) Arv1 (ENSNGAG00000007653) Fam89a (ENSNGAG00000015567) Trim67 (ENSNGAG00000000094) 2810004N23Rik (ENSNGAG00000001222) Lesser Egyptian jerboa MODERN SPECIES 112 Tmem132e (ENSJJAG00000018290) Cct6b (ENSJJAG00000014826) Zfp830 (ENSJJAG00000010210) Lig3 (ENSJJAG00000003848) Rffl (ENSJJAG00000020929) Rad51d (ENSJJAG00000014931) Fndc8 (ENSJJAG00000018336) Nle1 (ENSJJAG00000008356) Unc45b (ENSJJAG00000018066) ENSJJAG00000016743 ENSJJAG00000020087 ENSJJAG00000024250 ENSJJAG00000018288 Slfn14 (ENSJJAG00000016028) ENSJJAG00000008010 Ap2b1 (ENSJJAG00000023688) #22 Rasl10b (ENSJJAG00000011469) #23 ENSJJAG00000020015 #25 1700020L24Rik (ENSJJAG00000011369) #26 Mmp28 (ENSJJAG00000009319) #27 Taf15 (ENSJJAG00000010606) #28 Heatr9 (ENSJJAG00000012557) #29 Ccl5 (ENSJJAG00000024069) #30 Ccl3 (ENSJJAG00000022032) #35 Ccl4 (ENSJJAG00000011404) ##30 ENSJJAG00000023138 Wfdc21 (ENSJJAG00000014661) Heatr6 (ENSJJAG00000012154) Hnf1b (ENSJJAG00000011207) Ddx52 (ENSJJAG00000021877) Synrg (ENSJJAG00000021827) Kangaroo rat MODERN SPECIES 338 Cct6b (ENSDORG00000001249) Lig3 (ENSDORG00000013422) Rffl (ENSDORG00000013424) Rad51d (ENSDORG00000024542) Fndc8 (ENSDORG00000000843) Nle1 (ENSDORG00000000845) Unc45b (ENSDORG00000000847) ENSDORG00000023333 Pex12 (ENSDORG00000026935) #21 Ap2b1 (ENSDORG00000003803) #22 Rasl10b (ENSDORG00000003805) #23 ENSDORG00000026155 #25 1700020L24Rik (ENSDORG00000003808) #26 Mmp28 (ENSDORG00000003809) #27 Taf15 (ENSDORG00000014619) #28 ENSDORG00000003141 #29 Ccl5 (ENSDORG00000007688) #30 Ccl4 (ENSDORG00000026295) ##30 Wfdc21 (ENSDORG00000024216) Heatr6 (ENSDORG00000011214) Hnf1b (ENSDORG00000009669) Ddx52 (ENSDORG00000004276) Synrg (ENSDORG00000004275) Dusp14 (ENSDORG00000025341) Tada2a (ENSDORG00000009547) Lagomorpha ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01100000263482.F ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT00940000165476.b ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT00940000165089 #37 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Rabbit MODERN SPECIES 10 ENSOCUG00000030195 ENSOCUG00000013412 ##30 ENSOCUG00000013416 TMEM132E (ENSOCUG00000012159) CCT6B (ENSOCUG00000012343) ZNF830 (ENSOCUG00000012351) LIG3 (ENSOCUG00000006305) RFFL (ENSOCUG00000006315) ENSOCUG00000014300 FNDC8 (ENSOCUG00000014306) NLE1 (ENSOCUG00000014310) UNC45B (ENSOCUG00000026443) SLFN13 (ENSOCUG00000003504) SLFN14 (ENSOCUG00000006884) PEX12 (ENSOCUG00000004058) #21 AP2B1 (ENSOCUG00000004060) #22 RASL10B (ENSOCUG00000004080) #23 GAS2L2 (ENSOCUG00000004081) C17orf50 (ENSOCUG00000004084) #26 MMP28 (ENSOCUG00000004089) #27 TAF15 (ENSOCUG00000002838) #28 HEATR9 (ENSOCUG00000002842) #29 ENSOCUG00000002848 #30 CCL14 (ENSOCUG00000002849) #32 ENSOCUG00000000686 ENSOCUG00000000771 #35 ENSOCUG00000026206 #37 ENSOCUG00000036945 HEATR6 (ENSOCUG00000003690) HNF1B (ENSOCUG00000003682) DDX52 (ENSOCUG00000014532) Pika MODERN SPECIES 3093 ENSOPRG00000011707 LIG3 (ENSOPRG00000011746) RFFL (ENSOPRG00000011769) RAD51D (ENSOPRG00000011777) FNDC8 (ENSOPRG00000011794) NLE1 (ENSOPRG00000011799) UNC45B (ENSOPRG00000011826) ENSOPRG00000011856 PEX12 (ENSOPRG00000011876) #21 AP2B1 (ENSOPRG00000011887) #22 RASL10B (ENSOPRG00000011920) #23 ENSOPRG00000011930 #25 C17orf50 (ENSOPRG00000011951) #26 MMP28 (ENSOPRG00000011967) #27 HEATR9 (ENSOPRG00000011985) #29 ENSOPRG00000012010 #30 ENSOPRG00000012019 #31 CCL14 (ENSOPRG00000018376) #32 ENSOPRG00000012033 ENSOPRG00000012047 ENSOPRG00000012051 Tree shrew MODERN SPECIES 2667 AP2B1 (ENSTBEG00000005943) #22 ENSTBEG00000007338 #23 GAS2L2 (ENSTBEG00000007765) C17orf50 (ENSTBEG00000008260) #26 MMP28 (ENSTBEG00000008806) #27 TAF15 (ENSTBEG00000009064) #28 ENSTBEG00000001717 #29 ENSTBEG00000002353 #30 ENSTBEG00000002787 #33 Primates ANCESTRAL SPECIES 3 ENSGT01100000263482.F ##30 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.a ##30 ENSGT00940000166945 Haplorrhini ANCESTRAL SPECIES 6 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.a ##30 ENSGT00520000060616 ENSGT00390000016675 Simiiformes ANCESTRAL SPECIES 7 ENSGT01100000263482.F ##30 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a #35 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 8 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.b #35 Hominoidea ANCESTRAL SPECIES 27 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.a.a #35 Hominidae ANCESTRAL SPECIES 20 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.a.a #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209.c #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.a.a #35 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209.c #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.a.a #35 Pan ANCESTRAL SPECIES 3 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00390000010391.w.b ENSGT00390000006867.e.a ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.b.d ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b ENSGT00390000016209.c #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.a.a #35 Chimpanzee MODERN SPECIES 8 UNC45B (ENSPTRG00000009013) ENSPTRG00000047307 SLFN5 (ENSPTRG00000009016) SLFN11 (ENSPTRG00000009017) ENSPTRG00000047496 ENSPTRG00000047996 SLFN12 (ENSPTRG00000009018) SLFN13 (ENSPTRG00000042109) ENSPTRG00000044720 ENSPTRG00000052504 ENSPTRG00000048253 SLFN12L (ENSPTRG00000030902) SLFN14 (ENSPTRG00000039969) PEX12 (ENSPTRG00000009020) #21 ENSPTRG00000052160 AP2B1 (ENSPTRG00000009021) #22 RASL10B (ENSPTRG00000009022) #23 GAS2L2 (ENSPTRG00000009023) C17H17orf50 (ENSPTRG00000009024) #26 MMP28 (ENSPTRG00000009025) #27 TAF15 (ENSPTRG00000009026) #28 HEATR9 (ENSPTRG00000009028) #29 CCL5 (ENSPTRG00000046869) #30 RDM1 (ENSPTRG00000009031) LYZL6 (ENSPTRG00000009032) CCL16 (ENSPTRG00000009033) #31 CCL14 (ENSPTRG00000033677) #32 CCL15 (ENSPTRG00000009034) #33 CCL23 (ENSPTRG00000009036) #33 CCL18 (ENSPTRG00000009037) #35 CCL3 (ENSPTRG00000009039) #35 Bonobo MODERN SPECIES 8 UNC45B (ENSPPAG00000030112) ENSPPAG00000025361 SLFN5 (ENSPPAG00000037908) SLFN11 (ENSPPAG00000039146) ENSPPAG00000038962 ENSPPAG00000024460 SLFN12 (ENSPPAG00000008992) SLFN13 (ENSPPAG00000039054) ENSPPAG00000038367 SLFN12L (ENSPPAG00000026392) ENSPPAG00000035752 ENSPPAG00000028828 SLFN14 (ENSPPAG00000043166) PEX12 (ENSPPAG00000036383) #21 ENSPPAG00000029903 AP2B1 (ENSPPAG00000031208) #22 ENSPPAG00000040461 RASL10B (ENSPPAG00000028215) #23 GAS2L2 (ENSPPAG00000038597) C17orf50 (ENSPPAG00000033236) #26 MMP28 (ENSPPAG00000029288) #27 ENSPPAG00000043510 #28 HEATR9 (ENSPPAG00000031757) #29 ENSPPAG00000043880 #30 RDM1 (ENSPPAG00000029969) LYZL6 (ENSPPAG00000032212) CCL16 (ENSPPAG00000035490) #31 CCL14 (ENSPPAG00000033863) #32 CCL15 (ENSPPAG00000034926) #33 CCL23 (ENSPPAG00000032672) #33 CCL18 (ENSPPAG00000038398) #35 Human MODERN SPECIES 8 LIG3 (ENSG00000005156) RFFL (ENSG00000092871) ENSG00000267618 RAD51D (ENSG00000185379) FNDC8 (ENSG00000073598) NLE1 (ENSG00000073536) UNC45B (ENSG00000141161) SLC35G3 (ENSG00000164729) SLFN5 (ENSG00000166750) SLFN11 (ENSG00000172716) SLFN12 (ENSG00000172123) SLFN13 (ENSG00000154760) SLFN12L (ENSG00000205045) SLFN14 (ENSG00000236320) PEX12 (ENSG00000108733) #21 AP2B1 (ENSG00000006125) #22 RASL10B (ENSG00000270885) #23 GAS2L2 (ENSG00000270765) MMP28 (ENSG00000271447) #27 C17orf50 (ENSG00000270806) #26 TAF15 (ENSG00000270647) #28 HEATR9 (ENSG00000270379) #29 CCL5 (ENSG00000271503) RDM1 (ENSG00000278023) LYZL6 (ENSG00000275722) CCL16 (ENSG00000275152) #31 CCL14 (ENSG00000276409) #32 CCL15 (ENSG00000275718) #33 CCL23 (ENSG00000274736) #33 CCL18 (ENSG00000275385) #35 CCL3 (ENSG00000277632) #35 Gorilla MODERN SPECIES 18 UNC45B (ENSGGOG00000010763) ENSGGOG00000040207 ENSGGOG00000009494 SLFN5 (ENSGGOG00000011259) SLFN11 (ENSGGOG00000034948) ENSGGOG00000041052 ENSGGOG00000038915 SLFN12 (ENSGGOG00000001620) SLFN13 (ENSGGOG00000014291) ENSGGOG00000042321 ENSGGOG00000041375 SLFN12L (ENSGGOG00000002881) ENSGGOG00000027717 ENSGGOG00000026951 PEX12 (ENSGGOG00000003330) #21 AP2B1 (ENSGGOG00000015593) #22 RASL10B (ENSGGOG00000015607) #23 GAS2L2 (ENSGGOG00000015608) C17orf50 (ENSGGOG00000015614) #26 MMP28 (ENSGGOG00000015617) #27 TAF15 (ENSGGOG00000005693) #28 HEATR9 (ENSGGOG00000007596) #29 ENSGGOG00000007604 RDM1 (ENSGGOG00000010584) LYZL6 (ENSGGOG00000010460) CCL16 (ENSGGOG00000038395) #31 CCL14 (ENSGGOG00000002497) #32 CCL15 (ENSGGOG00000002498) #33 CCL23 (ENSGGOG00000003575) #33 CCL18 (ENSGGOG00000011865) #35 CCL3 (ENSGGOG00000026449) #35 Orangutan MODERN SPECIES 8 LIG3 (ENSPPYG00000008176) RFFL (ENSPPYG00000008177) RAD51D (ENSPPYG00000008178) FNDC8 (ENSPPYG00000008179) NLE1 (ENSPPYG00000008180) UNC45B (ENSPPYG00000008181) SLFN5 (ENSPPYG00000008182) SLFN11 (ENSPPYG00000038116) ENSPPYG00000039214 SLFN12 (ENSPPYG00000008184) SLFN13 (ENSPPYG00000029995) SLFN12L (ENSPPYG00000008186) SLFN14 (ENSPPYG00000035943) ENSPPYG00000030213 PEX12 (ENSPPYG00000008187) #21 AP2B1 (ENSPPYG00000008188) #22 RASL10B (ENSPPYG00000037237) #23 GAS2L2 (ENSPPYG00000008191) ENSPPYG00000008192 #26 MMP28 (ENSPPYG00000008193) #27 TAF15 (ENSPPYG00000008194) #28 HEATR9 (ENSPPYG00000008195) #29 ENSPPYG00000031268 #30 RDM1 (ENSPPYG00000008198) LYZL6 (ENSPPYG00000008199) CCL16 (ENSPPYG00000008200) #31 ENSPPYG00000040512 #32 CCL15 (ENSPPYG00000041781) #33 CCL23 (ENSPPYG00000008202) #33 CCL18 (ENSPPYG00000008203) #35 CCL3 (ENSPPYG00000038679) #35 Gibbon DUPLICATION Gibbon MODERN SPECIES 111 SLFN5 (ENSNLEG00000013893) SLFN11 (ENSNLEG00000013909) SLFN13 (ENSNLEG00000032280) SLFN14 (ENSNLEG00000013925) PEX12 (ENSNLEG00000013933) #21 ENSNLEG00000013939 #22 C17orf50 (ENSNLEG00000014035) #26 MMP28 (ENSNLEG00000014038) #27 TAF15 (ENSNLEG00000014063) #28 HEATR9 (ENSNLEG00000014122) #29 ENSNLEG00000014169 #30 RDM1 (ENSNLEG00000014173) LYZL6 (ENSNLEG00000014207) ENSNLEG00000014211 #31 ENSNLEG00000014214 #32 CCL15 (ENSNLEG00000014223) #33 CCL23 (ENSNLEG00000014228) #33 CCL18 (ENSNLEG00000014237) #35 ENSNLEG00000035999 #35 ENSNLEG00000014239 #35 ENSNLEG00000014251 ##30 Gibbon MODERN SPECIES 24 ADGRL3 (ENSNLEG00000008957) ENSNLEG00000033354 TECRL (ENSNLEG00000008982) ENSNLEG00000030813 EPHA5 (ENSNLEG00000008987) CENPC (ENSNLEG00000009058) STAP1 (ENSNLEG00000009082) UBA6 (ENSNLEG00000009086) GNRHR (ENSNLEG00000009158) TMPRSS11D (ENSNLEG00000009163) TMPRSS11A (ENSNLEG00000009182) TMPRSS11F (ENSNLEG00000009193) YTHDC1 (ENSNLEG00000009202) TMPRSS11E (ENSNLEG00000009223) UGT2B15 (ENSNLEG00000009240) ENSNLEG00000009256 #22 LRP8 (ENSNLEG00000017986) MAGOH (ENSNLEG00000017987) CZIB (ENSNLEG00000017988) ENSNLEG00000028350 CPT2 (ENSNLEG00000017989) SLC1A7 (ENSNLEG00000017990) PODN (ENSNLEG00000017991) SCP2 (ENSNLEG00000017992) ECHDC2 (ENSNLEG00000036128) ENSNLEG00000033930 ZYG11B (ENSNLEG00000017994) COA7 (ENSNLEG00000036297) SHISAL2A (ENSNLEG00000017996) GPX7 (ENSNLEG00000017997) ENSNLEG00000035494 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01050000245362 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT01100000263482.C.c.b.b.a.b.a.a.d #35 Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458.b ENSGT00390000006458.a.a ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 Cercopithecinae_b ANCESTRAL SPECIES 33 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458.b ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a.cb ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a.bb.b ENSGT00410000025651.A.b.a.a.b.d ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 Cercopithecinae_d ANCESTRAL SPECIES 98 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458.b ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a.bb.b ENSGT00410000025651.A.b.a.a.b.d ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 Sooty mangabey MODERN SPECIES 145 LIG3 (ENSCATG00000044619) RFFL (ENSCATG00000037355) RAD51D (ENSCATG00000034042) ENSCATG00000031430 ENSCATG00000034997 NLE1 (ENSCATG00000038372) UNC45B (ENSCATG00000038004) SLFN5 (ENSCATG00000042531) SLFN12 (ENSCATG00000037618) SLFN13 (ENSCATG00000013030) ENSCATG00000002686 SLFN12L (ENSCATG00000041013) SLFN14 (ENSCATG00000021975) PEX12 (ENSCATG00000040975) #21 ENSCATG00000044039 AP2B1 (ENSCATG00000031381) #22 RASL10B (ENSCATG00000037782) #23 GAS2L2 (ENSCATG00000032299) C17orf50 (ENSCATG00000039669) #26 MMP28 (ENSCATG00000045014) #27 TAF15 (ENSCATG00000044848) #28 HEATR9 (ENSCATG00000037222) #29 ENSCATG00000042685 #30 RDM1 (ENSCATG00000044451) LYZL6 (ENSCATG00000043618) CCL16 (ENSCATG00000014237) #31 CCL14 (ENSCATG00000032451) #32 CCL15 (ENSCATG00000029737) #33 CCL23 (ENSCATG00000040222) #33 CCL18 (ENSCATG00000031865) #35 CCL3L3 (ENSCATG00000026347) #35 Drill MODERN SPECIES 1298 SLFN12 (ENSMLEG00000031521) ENSMLEG00000040760 ENSMLEG00000034690 SLFN12L (ENSMLEG00000025692) SLFN14 (ENSMLEG00000028994) PEX12 (ENSMLEG00000028726) #21 ENSMLEG00000043929 AP2B1 (ENSMLEG00000042195) #22 RASL10B (ENSMLEG00000039957) #23 GAS2L2 (ENSMLEG00000028993) MMP28 (ENSMLEG00000035285) #27 TAF15 (ENSMLEG00000028534) #28 HEATR9 (ENSMLEG00000034282) #29 ENSMLEG00000033238 #30 RDM1 (ENSMLEG00000041158) LYZL6 (ENSMLEG00000034002) CCL16 (ENSMLEG00000036599) #31 CCL14 (ENSMLEG00000027250) #32 CCL15 (ENSMLEG00000029997) #33 CCL23 (ENSMLEG00000036290) #33 CCL18 (ENSMLEG00000036282) #35 ENSMLEG00000043882 #35 ENSMLEG00000033437 #37 Olive baboon MODERN SPECIES 8 ZNF830 (ENSPANG00000023017) LIG3 (ENSPANG00000022999) RFFL (ENSPANG00000023003) RAD51D (ENSPANG00000022997) FNDC8 (ENSPANG00000022990) NLE1 (ENSPANG00000022991) UNC45B (ENSPANG00000022993) SLFN5 (ENSPANG00000022994) SLFN11 (ENSPANG00000022995) SLFN12 (ENSPANG00000022996) SLFN13 (ENSPANG00000048259) SLFN12L (ENSPANG00000030174) ENSPANG00000032536 SLFN14 (ENSPANG00000022979) PEX12 (ENSPANG00000022980) #21 AP2B1 (ENSPANG00000022982) #22 RASL10B (ENSPANG00000046564) #23 GAS2L2 (ENSPANG00000022978) C17orf50 (ENSPANG00000022929) #26 MMP28 (ENSPANG00000022977) #27 TAF15 (ENSPANG00000022930) #28 HEATR9 (ENSPANG00000022932) #29 ENSPANG00000030339 #30 RDM1 (ENSPANG00000022933) LYZL6 (ENSPANG00000022934) CCL16 (ENSPANG00000022935) #31 CCL14 (ENSPANG00000022936) #32 CCL15 (ENSPANG00000022937) #33 ENSPANG00000022938 CCL18 (ENSPANG00000041083) #35 HEATR6 (ENSPANG00000009798) Macaca ANCESTRAL SPECIES 4 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458.a.a ENSGT00390000006458.a.b ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT01100000263482.C.c.b.a.b.a.h #33 ENSGT01100000263482.C.c.b.b.a.b.b #35 Macaca_a ANCESTRAL SPECIES 4 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00390000006458.a.b ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.a.a.b.d ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.b ENSGT00410000025651.A.b.b ENSGT00940000163244.d.b.b.b.a.a ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.a.b.a ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a.g #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b.b #35 Crab-eating macaque MODERN SPECIES 7 ZNF830 (ENSMFAG00000025776) LIG3 (ENSMFAG00000036202) ENSMFAG00000036080 FNDC8 (ENSMFAG00000000308) NLE1 (ENSMFAG00000037776) UNC45B (ENSMFAG00000036065) SLFN5 (ENSMFAG00000034231) SLFN13 (ENSMFAG00000000114) SLFN12 (ENSMFAG00000001223) SLFN12L (ENSMFAG00000050765) ENSMFAG00000064945 ENSMFAG00000059172 SLFN14 (ENSMFAG00000037905) ENSMFAG00000059317 PEX12 (ENSMFAG00000039486) #21 AP2B1 (ENSMFAG00000032866) #22 RASL10B (ENSMFAG00000059499) #23 GAS2L2 (ENSMFAG00000046155) C17orf50 (ENSMFAG00000055962) #26 MMP28 (ENSMFAG00000003523) #27 TAF15 (ENSMFAG00000041941) #28 HEATR9 (ENSMFAG00000001762) #29 ENSMFAG00000031627 #30 RDM1 (ENSMFAG00000032968) ENSMFAG00000054146 LYZL6 (ENSMFAG00000044524) CCL16 (ENSMFAG00000002269) #31 CCL14 (ENSMFAG00000000804) #32 CCL15 (ENSMFAG00000033315) #33 ENSMFAG00000003696 CCL18 (ENSMFAG00000036319) #35 Rhesus MODERN SPECIES 7 ZNF830 (ENSMMUG00000006402) LIG3 (ENSMMUG00000004794) RFFL (ENSMMUG00000000750) FNDC8 (ENSMMUG00000000744) NLE1 (ENSMMUG00000000751) UNC45B (ENSMMUG00000005170) SLFN5 (ENSMMUG00000010082) SLFN13 (ENSMMUG00000037555) SLFN12 (ENSMMUG00000005550) SLFN12L (ENSMMUG00000060439) ENSMMUG00000055108 ENSMMUG00000062650 SLFN14 (ENSMMUG00000048316) ENSMMUG00000031736 PEX12 (ENSMMUG00000006047) #21 AP2B1 (ENSMMUG00000006048) #22 RASL10B (ENSMMUG00000013143) #23 GAS2L2 (ENSMMUG00000013142) C16H17orf50 (ENSMMUG00000022228) #26 MMP28 (ENSMMUG00000022229) #27 TAF15 (ENSMMUG00000047780) #28 HEATR9 (ENSMMUG00000022233) #29 CCL5 (ENSMMUG00000054796) #30 RDM1 (ENSMMUG00000006847) ENSMMUG00000054146 LYZL6 (ENSMMUG00000006850) CCL16 (ENSMMUG00000045883) #31 CCL14 (ENSMMUG00000002466) #32 CCL15 (ENSMMUG00000039864) #33 CCL23 (ENSMMUG00000002467) CCL18 (ENSMMUG00000047114) #35 Pig-tailed macaque MODERN SPECIES 116 LIG3 (ENSMNEG00000039607) RFFL (ENSMNEG00000031746) RAD51D (ENSMNEG00000028511) FNDC8 (ENSMNEG00000041134) NLE1 (ENSMNEG00000032551) UNC45B (ENSMNEG00000036484) SLFN5 (ENSMNEG00000032653) SLFN12 (ENSMNEG00000044024) SLFN13 (ENSMNEG00000033683) ENSMNEG00000029409 ENSMNEG00000045423 SLFN12L (ENSMNEG00000040209) SLFN14 (ENSMNEG00000007518) PEX12 (ENSMNEG00000034562) #21 ENSMNEG00000029590 AP2B1 (ENSMNEG00000042752) #22 RASL10B (ENSMNEG00000039335) #23 GAS2L2 (ENSMNEG00000039828) C17orf50 (ENSMNEG00000036265) #26 MMP28 (ENSMNEG00000035643) #27 TAF15 (ENSMNEG00000044227) #28 HEATR9 (ENSMNEG00000029332) #29 ENSMNEG00000034547 #30 RDM1 (ENSMNEG00000039977) LYZL6 (ENSMNEG00000036987) CCL16 (ENSMNEG00000033984) #31 CCL14 (ENSMNEG00000045147) #32 CCL15 (ENSMNEG00000043539) #33 CCL23 (ENSMNEG00000034456) #33 CCL18 (ENSMNEG00000030173) #35 ENSMNEG00000034156 #35 Vervet Monkey MODERN SPECIES 7 CCT6B (ENSCSAG00000006334) ZNF830 (ENSCSAG00000000556) LIG3 (ENSCSAG00000006328) RFFL (ENSCSAG00000006321) RAD51D (ENSCSAG00000006316) FNDC8 (ENSCSAG00000006312) NLE1 (ENSCSAG00000006308) UNC45B (ENSCSAG00000006303) SLFN5 (ENSCSAG00000006300) SLFN11 (ENSCSAG00000006296) SLFN12 (ENSCSAG00000006292) SLFN13 (ENSCSAG00000006288) SLFN12L (ENSCSAG00000006280) SLFN14 (ENSCSAG00000006274) PEX12 (ENSCSAG00000006267) #21 AP2B1 (ENSCSAG00000006260) #22 RASL10B (ENSCSAG00000006252) #23 GAS2L2 (ENSCSAG00000006249) C17orf50 (ENSCSAG00000006245) #26 MMP28 (ENSCSAG00000006243) #27 TAF15 (ENSCSAG00000006241) #28 HEATR9 (ENSCSAG00000006228) #29 ENSCSAG00000006213 #30 RDM1 (ENSCSAG00000006209) LYZL6 (ENSCSAG00000006206) CCL16 (ENSCSAG00000006203) #31 CCL14 (ENSCSAG00000006201) #32 CCL15 (ENSCSAG00000006198) #33 CCL18 (ENSCSAG00000006194) #35 ENSCSAG00000006191 ##30 ENSCSAG00000006185 Rhinopithecus ANCESTRAL SPECIES 320 ENSGT00410000025651.A.b.a.a.b.c ENSGT00410000025651.A.b.a.a.a.a ENSGT00390000010391.w.b ENSGT00410000025651.A.b.a.a.b.d ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00940000168309 ENSGT00390000018397 ENSGT00940000161690 Black snub-nosed monkey MODERN SPECIES 1029 SLFN11 (ENSRBIG00000034584) ENSRBIG00000017577 ENSRBIG00000024045 SLFN12 (ENSRBIG00000031538) SLFN13 (ENSRBIG00000043402) SLFN12L (ENSRBIG00000038479) SLFN14 (ENSRBIG00000029031) PEX12 (ENSRBIG00000013732) #21 AP2B1 (ENSRBIG00000031992) #22 RASL10B (ENSRBIG00000038353) #23 GAS2L2 (ENSRBIG00000026402) C17orf50 (ENSRBIG00000043080) #26 MMP28 (ENSRBIG00000042961) #27 TAF15 (ENSRBIG00000043192) #28 HEATR9 (ENSRBIG00000034249) #29 ENSRBIG00000039186 #30 ENSRBIG00000033529 RDM1 (ENSRBIG00000030000) LYZL6 (ENSRBIG00000029037) Golden snub-nosed monkey MODERN SPECIES 2519 ENSRROG00000020738 SLFN12 (ENSRROG00000018265) SLFN13 (ENSRROG00000018236) ENSRROG00000043072 ENSRROG00000001089 SLFN12L (ENSRROG00000039374) ENSRROG00000045772 SLFN14 (ENSRROG00000042714) PEX12 (ENSRROG00000040662) #21 AP2B1 (ENSRROG00000030200) #22 RASL10B (ENSRROG00000030917) #23 GAS2L2 (ENSRROG00000031550) C17orf50 (ENSRROG00000027811) #26 MMP28 (ENSRROG00000029324) #27 TAF15 (ENSRROG00000029426) #28 HEATR9 (ENSRROG00000010829) #29 ENSRROG00000029256 RDM1 (ENSRROG00000035242) LYZL6 (ENSRROG00000037519) Catarrhini ANCESTRAL SPECIES ENSGT00940000155206.d.b #22 Hominoidea ANCESTRAL SPECIES 164 ENSGT00940000155206.d.b #22 ENSGT00940000153309.c.b.a.a Hominidae ANCESTRAL SPECIES 163 ENSGT00940000155206.d.b #22 ENSGT00940000153309.c.b.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 57 ENSGT00940000155206.d.b #22 ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b ENSGT00940000158335.d Homo/Pan group ANCESTRAL SPECIES 76 ENSGT00940000155206.d.b #22 ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b Pan ANCESTRAL SPECIES 6 ENSGT00390000003231.a.f.b ENSGT00390000018706.m.b.b.l.b ENSGT00950000183123.h.b ENSGT00940000161632.c ENSGT00940000158987 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00940000163054 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000155206.d.b #22 ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b ENSGT00940000158335.c ENSGT00940000162668 ENSGT00940000154977.l.b.b ENSGT00940000165485 ENSGT00390000003732 ENSGT00950000183119.a.e.a.d.a.a ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 972 ENSPTRG00000050488 ENSPTRG00000052173 NOX1 (ENSPTRG00000048908) CSTF2 (ENSPTRG00000022090) SYTL4 (ENSPTRG00000022089) SRPX2 (ENSPTRG00000022088) TSPAN6 (ENSPTRG00000022087) TNMD (ENSPTRG00000022086) PCDH19 (ENSPTRG00000022085) ENSPTRG00000043192 DIAPH2 (ENSPTRG00000022082) ENSPTRG00000048048 ENSPTRG00000033789 FAM133A (ENSPTRG00000044529) NAP1L3 (ENSPTRG00000022080) ENSPTRG00000043794 #22 ENSPTRG00000043870 ENSPTRG00000022079 PABPC5 (ENSPTRG00000022078) ENSPTRG00000045302 ENSPTRG00000044589 CPXCR1 (ENSPTRG00000022076) ENSPTRG00000049218 KLHL4 (ENSPTRG00000022075) DACH2 (ENSPTRG00000022073) ENSPTRG00000052049 CHM (ENSPTRG00000022071) POF1B (ENSPTRG00000022070) ZNF711 (ENSPTRG00000022069) ENSPTRG00000022068 ENSPTRG00000043670 Chimpanzee MODERN SPECIES 843 ENSPTRG00000047694 #22 ENSPTRG00000047333 ENSPTRG00000051629 Bonobo MODERN SPECIES 369 XKRX (ENSPPAG00000030677) ENSPPAG00000031058 ENSPPAG00000027791 NOX1 (ENSPPAG00000021977) CSTF2 (ENSPPAG00000031804) SYTL4 (ENSPPAG00000026955) SRPX2 (ENSPPAG00000039226) TSPAN6 (ENSPPAG00000038316) TNMD (ENSPPAG00000035804) PCDH19 (ENSPPAG00000039228) ENSPPAG00000034644 DIAPH2 (ENSPPAG00000040909) ENSPPAG00000038822 FAM133A (ENSPPAG00000017635) NAP1L3 (ENSPPAG00000019923) ENSPPAG00000007354 #22 ENSPPAG00000003031 ENSPPAG00000040878 ENSPPAG00000030962 ENSPPAG00000043443 PABPC5 (ENSPPAG00000007378) ENSPPAG00000041507 ENSPPAG00000038346 CPXCR1 (ENSPPAG00000016441) ENSPPAG00000026574 KLHL4 (ENSPPAG00000043431) ENSPPAG00000036042 ENSPPAG00000024013 CHM (ENSPPAG00000034301) ENSPPAG00000028498 POF1B (ENSPPAG00000033485) Gorilla MODERN SPECIES 523 ENSGGOG00000027879 NOX1 (ENSGGOG00000006886) CSTF2 (ENSGGOG00000022267) SYTL4 (ENSGGOG00000001159) SRPX2 (ENSGGOG00000010009) TSPAN6 (ENSGGOG00000010003) TNMD (ENSGGOG00000017007) PCDH19 (ENSGGOG00000001810) ENSGGOG00000027167 ENSGGOG00000038151 DIAPH2 (ENSGGOG00000002859) ENSGGOG00000038270 FAM133A (ENSGGOG00000043974) NAP1L3 (ENSGGOG00000016989) ENSGGOG00000025902 ENSGGOG00000039790 #22 ENSGGOG00000025897 ENSGGOG00000042618 ENSGGOG00000008584 PABPC5 (ENSGGOG00000007622) ENSGGOG00000037634 ENSGGOG00000036979 CPXCR1 (ENSGGOG00000026865) RPSA (ENSGGOG00000036643) KLHL4 (ENSGGOG00000002307) DACH2 (ENSGGOG00000007231) ENSGGOG00000040803 CHM (ENSGGOG00000022912) POF1B (ENSGGOG00000016908) ZNF711 (ENSGGOG00000006110) SATL1 (ENSGGOG00000016333) Gibbon MODERN SPECIES 449 ENSNLEG00000034385 NOX1 (ENSNLEG00000007516) CSTF2 (ENSNLEG00000007510) SYTL4 (ENSNLEG00000007507) SRPX2 (ENSNLEG00000007506) TSPAN6 (ENSNLEG00000007505) TNMD (ENSNLEG00000007504) PCDH19 (ENSNLEG00000007503) ENSNLEG00000013567 ENSNLEG00000030185 DIAPH2 (ENSNLEG00000000884) ENSNLEG00000019052 FAM133A (ENSNLEG00000019038) NAP1L3 (ENSNLEG00000000881) ENSNLEG00000034978 ENSNLEG00000029399 #22 ENSNLEG00000029321 PABPC5 (ENSNLEG00000035086) ENSNLEG00000036286 ENSNLEG00000035924 ENSNLEG00000027997 CPXCR1 (ENSNLEG00000002894) KLHL4 (ENSNLEG00000002824) ENSNLEG00000002822 DACH2 (ENSNLEG00000002793) ENSNLEG00000027890 CHM (ENSNLEG00000002762) ENSNLEG00000032608 POF1B (ENSNLEG00000002694) ZNF711 (ENSNLEG00000002656) APOOL (ENSNLEG00000002634) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000155206.d.c #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155206.d.c #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155206.d.c #22 Bolivian squirrel monkey MODERN SPECIES 74 SLFN5 (ENSSBOG00000021890) SLFN11 (ENSSBOG00000023846) SLFN14 (ENSSBOG00000027643) PEX12 (ENSSBOG00000032853) #21 AP2B1 (ENSSBOG00000034151) #22 ENSSBOG00000021189 RASL10B (ENSSBOG00000027306) #23 GAS2L2 (ENSSBOG00000033199) MMP28 (ENSSBOG00000023020) #27 ENSSBOG00000032185 #28 HEATR9 (ENSSBOG00000030182) #29 ENSSBOG00000033218 #30 RDM1 (ENSSBOG00000028130) LYZL6 (ENSSBOG00000029469) CCL16 (ENSSBOG00000025408) #31 CCL14 (ENSSBOG00000034435) #32 ENSSBOG00000023945 ENSSBOG00000023104 ENSSBOG00000033067 ENSSBOG00000008746 #37 Capuchin MODERN SPECIES 305 ENSCCAG00000023038 #22 ENSCCAG00000022234 ENSCCAG00000029629 CPXCR1 (ENSCCAG00000027844) Mas night monkey MODERN SPECIES 1179 ENSANAG00000037710 FAM133A (ENSANAG00000019379) NAP1L3 (ENSANAG00000029163) ENSANAG00000031749 ENSANAG00000023977 ENSANAG00000031272 PABPC5 (ENSANAG00000005063) ENSANAG00000013923 ENSANAG00000031195 ENSANAG00000022190 ENSANAG00000032607 #22 ENSANAG00000026733 ENSANAG00000031886 ENSANAG00000021711 CPXCR1 (ENSANAG00000025456) ENSANAG00000021853 KLHL4 (ENSANAG00000028429) ENSANAG00000029697 CHM (ENSANAG00000025422) POF1B (ENSANAG00000027640) ZNF711 (ENSANAG00000027967) Platyrrhini ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.d.b ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT00940000165089 #37 ENSGT01100000263482.C.c.b.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b.b #35 Cebidae ANCESTRAL SPECIES 10 ENSGT01100000263482.A.a.a.d.b ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT00940000165089 #37 ENSGT01100000263482.C.c.b.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT00520000060616 Cebidae_a ANCESTRAL SPECIES 1 ENSGT01060000248892 ENSGT01100000263482.F ##30 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018397 ENSGT00940000161690 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT00940000165089 #37 ENSGT01100000263482.C.c.b.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b.b #35 ENSGT00390000016675 Capuchin DUPLICATION Capuchin MODERN SPECIES 85 ENSCCAG00000006712 ENSCCAG00000027028 TMEM132E (ENSCCAG00000032199) ENSCCAG00000025546 CCT6B (ENSCCAG00000033971) LIG3 (ENSCCAG00000004189) RFFL (ENSCCAG00000015388) RAD51D (ENSCCAG00000022233) FNDC8 (ENSCCAG00000021053) NLE1 (ENSCCAG00000030907) UNC45B (ENSCCAG00000020566) SLFN5 (ENSCCAG00000033924) SLFN11 (ENSCCAG00000013862) SLFN14 (ENSCCAG00000024954) PEX12 (ENSCCAG00000022946) #21 AP2B1 (ENSCCAG00000035115) #22 RASL10B (ENSCCAG00000029475) #23 GAS2L2 (ENSCCAG00000025203) C17orf50 (ENSCCAG00000024927) #26 MMP28 (ENSCCAG00000027683) #27 TAF15 (ENSCCAG00000036025) #28 HEATR9 (ENSCCAG00000033181) #29 ENSCCAG00000034447 #30 RDM1 (ENSCCAG00000035763) ENSCCAG00000036951 ENSCCAG00000030889 Capuchin MODERN SPECIES 5 MBOAT4 (ENSCCAG00000037994) LEPROTL1 (ENSCCAG00000033916) SARAF (ENSCCAG00000027268) DUSP4 (ENSCCAG00000036753) TNKS (ENSCCAG00000020538) PPP1R3B (ENSCCAG00000001875) ERI1 (ENSCCAG00000032048) MFHAS1 (ENSCCAG00000024993) ENSCCAG00000032742 PRAG1 (ENSCCAG00000025342) LONRF1 (ENSCCAG00000019553) TRMT9B (ENSCCAG00000032783) DLC1 (ENSCCAG00000008032) ENSCCAG00000022045 ENSCCAG00000033627 ENSCCAG00000028915 #22 SGCZ (ENSCCAG00000027911) TUSC3 (ENSCCAG00000021149) Marmoset MODERN SPECIES 15 ENSCJAG00000003480 ANK2 (ENSCJAG00000003564) ENSCJAG00000083059 ENSCJAG00000081336 LARP7 (ENSCJAG00000003711) ENSCJAG00000072826 ZGRF1 (ENSCJAG00000003724) ENSCJAG00000073748 NEUROG2 (ENSCJAG00000003772) ENSCJAG00000056186 ALPK1 (ENSCJAG00000003780) ENSCJAG00000042606 TIFA (ENSCJAG00000038735) AP1AR (ENSCJAG00000043368) ENSCJAG00000083097 ENSCJAG00000077926 #22 ENSCJAG00000083735 ENSCJAG00000003822 ENSCJAG00000060028 PITX2 (ENSCJAG00000003830) ENPEP (ENSCJAG00000003856) ENSCJAG00000074022 ENSCJAG00000071394 ELOVL6 (ENSCJAG00000038180) ENSCJAG00000063162 ENSCJAG00000078793 EGF (ENSCJAG00000003982) LRIT3 (ENSCJAG00000004015) RRH (ENSCJAG00000004028) GAR1 (ENSCJAG00000082261) CFI (ENSCJAG00000004249) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1054 ENSANAG00000038143 SPRY1 (ENSANAG00000019703) SPATA5 (ENSANAG00000024588) NUDT6 (ENSANAG00000014690) FGF2 (ENSANAG00000037733) IL21 (ENSANAG00000033883) IL2 (ENSANAG00000026729) ENSANAG00000034045 BLTP1 (ENSANAG00000034336) TRPC3 (ENSANAG00000032754) BBS7 (ENSANAG00000037930) ENSANAG00000029372 EXOSC9 (ENSANAG00000024817) ENSANAG00000027799 ANXA5 (ENSANAG00000019060) ENSANAG00000037751 #22 QRFPR (ENSANAG00000036183) TNIP3 (ENSANAG00000021165) NDNF (ENSANAG00000021660) PRDM5 (ENSANAG00000027411) MAD2L1 (ENSANAG00000022503) PDE5A (ENSANAG00000036136) ENSANAG00000036422 ENSANAG00000003057 C4orf3 (ENSANAG00000034334) USP53 (ENSANAG00000037495) MYOZ2 (ENSANAG00000035756) SYNPO2 (ENSANAG00000022499) SEC24D (ENSANAG00000028409) METTL14 (ENSANAG00000024273) PRSS12 (ENSANAG00000024981) Mas night monkey MODERN SPECIES 805 LIG3 (ENSANAG00000027289) RFFL (ENSANAG00000024559) RAD51D (ENSANAG00000026327) FNDC8 (ENSANAG00000038020) NLE1 (ENSANAG00000029916) UNC45B (ENSANAG00000029104) ENSANAG00000018728 ENSANAG00000020029 ENSANAG00000019510 SLFN5 (ENSANAG00000020516) SLFN11 (ENSANAG00000018777) ENSANAG00000038116 SLFN14 (ENSANAG00000038117) PEX12 (ENSANAG00000007379) #21 ENSANAG00000019452 #22 RASL10B (ENSANAG00000022158) #23 GAS2L2 (ENSANAG00000029020) C17orf50 (ENSANAG00000033358) #26 MMP28 (ENSANAG00000037562) #27 TAF15 (ENSANAG00000020904) #28 HEATR9 (ENSANAG00000034198) #29 ENSANAG00000038037 #30 RDM1 (ENSANAG00000032752) LYZL6 (ENSANAG00000034516) CCL16 (ENSANAG00000024769) #31 CCL14 (ENSANAG00000034460) #32 ENSANAG00000038290 #33 CCL4L2 (ENSANAG00000032119) ##30 ENSANAG00000020518 #35 ENSANAG00000036612 #35 Tarsier MODERN SPECIES 7253 RAD51D (ENSTSYG00000002439) FNDC8 (ENSTSYG00000033775) NLE1 (ENSTSYG00000005707) UNC45B (ENSTSYG00000005718) ENSTSYG00000012984 ENSTSYG00000012957 ENSTSYG00000027201 SLFN13 (ENSTSYG00000035997) ENSTSYG00000032197 SLFN14 (ENSTSYG00000026907) PEX12 (ENSTSYG00000013016) #21 AP2B1 (ENSTSYG00000013030) #22 RASL10B (ENSTSYG00000026278) #23 ENSTSYG00000036881 #25 ANXA9 (ENSTSYG00000012630) Strepsirrhini ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.d.b ##30 ENSGT01100000263482.F ##30 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.a ##30 ENSGT00940000166945 Lemuriformes ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.d.b ##30 ENSGT01100000263482.F ##30 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.a ##30 ENSGT00940000166945 Lemuriformes_a ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.d.b ##30 ENSGT01100000263482.F ##30 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 ENSGT00390000012719.a ENSGT00940000159095 ENSGT00390000006458 ENSGT00940000157881 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b ENSGT00410000025651.A.b.a.a.a.a ENSGT00410000025651.A.b.b ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 ENSGT00390000007830 #26 ENSGT00940000159596 #27 ENSGT00940000156438 #28 ENSGT00390000007247 #29 ENSGT01100000263482.D #30 ENSGT00390000018505.b.j ENSGT01100000263482.B #31 ENSGT01100000263482.C.c.b.a.b.b #32 ENSGT01100000263482.C.c.b.a.b.a #33 ENSGT01100000263482.C.c.b.a.a ##30 ENSGT01100000263482.C.c.b.b.a.b #35 ENSGT01100000263482.C.c.b.b.a.a ##30 ENSGT01100000263482.C.c.a ##30 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 319 ENSPCOG00000024010 RASA1 (ENSPCOG00000002214) TMEM161B (ENSPCOG00000014869) ENSPCOG00000019704 MEF2C (ENSPCOG00000015854) CETN3 (ENSPCOG00000008573) MBLAC2 (ENSPCOG00000024583) ENSPCOG00000023427 LYSMD3 (ENSPCOG00000009535) ENSPCOG00000016607 ENSPCOG00000026419 ARRDC3 (ENSPCOG00000017963) ENSPCOG00000019606 #22 ENSPCOG00000028394 NR2F1 (ENSPCOG00000017525) FAM172A (ENSPCOG00000024072) KIAA0825 (ENSPCOG00000021681) SLF1 (ENSPCOG00000019438) MCTP1 (ENSPCOG00000027694) SKIC3 (ENSPCOG00000018234) ARSK (ENSPCOG00000017803) SPATA9 (ENSPCOG00000018648) RHOBTB3 (ENSPCOG00000014621) GLRX (ENSPCOG00000019782) Coquerels sifaka MODERN SPECIES 414 CCT6B (ENSPCOG00000022222) LIG3 (ENSPCOG00000025771) RFFL (ENSPCOG00000014273) RAD51D (ENSPCOG00000019951) FNDC8 (ENSPCOG00000025950) NLE1 (ENSPCOG00000016524) UNC45B (ENSPCOG00000026606) SLFN5 (ENSPCOG00000000263) SLFN13 (ENSPCOG00000015060) SLFN14 (ENSPCOG00000019040) PEX12 (ENSPCOG00000018773) #21 ENSPCOG00000021710 #22 RASL10B (ENSPCOG00000010262) #23 GAS2L2 (ENSPCOG00000008823) ENSPCOG00000017213 MMP28 (ENSPCOG00000021300) #27 TAF15 (ENSPCOG00000007032) #28 HEATR9 (ENSPCOG00000020659) #29 ENSPCOG00000009360 #30 ENSPCOG00000012531 CCL16 (ENSPCOG00000015310) #31 CCL14 (ENSPCOG00000000123) #32 ENSPCOG00000018507 #33 ENSPCOG00000017450 ##30 ENSPCOG00000026656 ##30 HEATR6 (ENSPCOG00000007339) HNF1B (ENSPCOG00000023250) Greater bamboo lemur MODERN SPECIES 167 ENSPSMG00000017180 CCT6B (ENSPSMG00000017271) ZNF830 (ENSPSMG00000017386) LIG3 (ENSPSMG00000017498) RFFL (ENSPSMG00000017643) RAD51D (ENSPSMG00000017716) FNDC8 (ENSPSMG00000017734) NLE1 (ENSPSMG00000017794) UNC45B (ENSPSMG00000017855) ENSPSMG00000017874 ENSPSMG00000017877 SLFN13 (ENSPSMG00000017890) ENSPSMG00000017899 SLFN14 (ENSPSMG00000017906) PEX12 (ENSPSMG00000017923) #21 AP2B1 (ENSPSMG00000018648) #22 RASL10B (ENSPSMG00000019772) #23 GAS2L2 (ENSPSMG00000019805) C17orf50 (ENSPSMG00000019813) #26 MMP28 (ENSPSMG00000019848) #27 TAF15 (ENSPSMG00000019965) #28 HEATR9 (ENSPSMG00000019980) #29 ENSPSMG00000019990 #30 ENSPSMG00000020004 CCL16 (ENSPSMG00000020013) #31 CCL14 (ENSPSMG00000020021) #32 ENSPSMG00000020027 #33 ENSPSMG00000020033 #33 ENSPSMG00000020039 ##30 ENSPSMG00000020065 #35 ENSPSMG00000020079 ##30 Mouse lemur MODERN SPECIES 7 CCL8 (ENSMICG00000037888) ##30 CCL13 (ENSMICG00000036035) ##30 CCL1 (ENSMICG00000042374) ##30 TMEM132E (ENSMICG00000003085) CCT6B (ENSMICG00000035976) LIG3 (ENSMICG00000006814) RFFL (ENSMICG00000006829) RAD51D (ENSMICG00000043657) FNDC8 (ENSMICG00000044023) NLE1 (ENSMICG00000001256) UNC45B (ENSMICG00000001264) SLFN5 (ENSMICG00000033107) SLFN13 (ENSMICG00000047620) SLFN14 (ENSMICG00000017034) PEX12 (ENSMICG00000045292) #21 AP2B1 (ENSMICG00000017045) #22 RASL10B (ENSMICG00000034231) #23 ENSMICG00000030480 #25 C17orf50 (ENSMICG00000017049) #26 MMP28 (ENSMICG00000017052) #27 TAF15 (ENSMICG00000017057) #28 HEATR9 (ENSMICG00000001796) #29 ENSMICG00000042451 #30 CCL16 (ENSMICG00000029697) #31 CCL14 (ENSMICG00000027552) #32 ENSMICG00000029419 #33 ENSMICG00000042571 #33 ENSMICG00000038715 ##30 ENSMICG00000008737 ##30 ENSMICG00000041554 ##30 HEATR6 (ENSMICG00000008703) Bushbaby MODERN SPECIES 209 SLFN14 (ENSOGAG00000006765) PEX12 (ENSOGAG00000004009) #21 AP2B1 (ENSOGAG00000005826) #22 RASL10B (ENSOGAG00000005829) #23 GAS2L2 (ENSOGAG00000031874) MMP28 (ENSOGAG00000011716) #27 TAF15 (ENSOGAG00000011719) #28 HEATR9 (ENSOGAG00000011724) #29 ENSOGAG00000011726 #30 CCL16 (ENSOGAG00000033836) #31 CCL14 (ENSOGAG00000027314) #32 ENSOGAG00000001316 #33 ENSOGAG00000012746 ##30 ENSOGAG00000028390 ##30 HEATR6 (ENSOGAG00000008153) HNF1B (ENSOGAG00000000869) DDX52 (ENSOGAG00000000868) SYNRG (ENSOGAG00000000867)