Tetrapoda ANCESTRAL SPECIES 82 ENSGT00510000047471 ENSGT00940000156831 ENSGT00940000161226 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00940000165977 ENSGT01070000257310 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT00940000155882.a.a ENSGT01030000235453 ENSGT01090000260061.c.a.c.a Amniota ANCESTRAL SPECIES 18 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.a ##19 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 ENSGT00940000155882.a.a Mammalia ANCESTRAL SPECIES 37 ENSGT01100000263482.C.c.b.b #37 ENSGT01100000263482.B #32 ENSGT01100000263482.D #29 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a Theria ANCESTRAL SPECIES 25 ENSGT00940000154991.a.b ENSGT01100000263482.A.a.a ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00550000074863 ENSGT00390000010789 Eutheria ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Primates ANCESTRAL SPECIES 3 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945 Haplorrhini ANCESTRAL SPECIES 6 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00520000060616 ENSGT00390000016675 Simiiformes ANCESTRAL SPECIES 7 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a #37 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 8 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.b #37 Hominoidea ANCESTRAL SPECIES 27 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##37 Hominidae ANCESTRAL SPECIES 20 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00390000006867.e.a #15 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##37 Orangutan MODERN SPECIES 8 LIG3 (ENSPPYG00000008176) #7 RFFL (ENSPPYG00000008177) #8 RAD51D (ENSPPYG00000008178) #9 FNDC8 (ENSPPYG00000008179) #10 NLE1 (ENSPPYG00000008180) #11 UNC45B (ENSPPYG00000008181) #12 SLFN5 (ENSPPYG00000008182) #13 SLFN11 (ENSPPYG00000038116) #14 ENSPPYG00000039214 #15 SLFN12 (ENSPPYG00000008184) #16 SLFN13 (ENSPPYG00000029995) #17 SLFN12L (ENSPPYG00000008186) #18 SLFN14 (ENSPPYG00000035943) #19 ENSPPYG00000030213 #20 PEX12 (ENSPPYG00000008187) #21 AP2B1 (ENSPPYG00000008188) #22 RASL10B (ENSPPYG00000037237) #23 GAS2L2 (ENSPPYG00000008191) #24 ENSPPYG00000008192 #25 MMP28 (ENSPPYG00000008193) #26 TAF15 (ENSPPYG00000008194) #27 HEATR9 (ENSPPYG00000008195) #28 ENSPPYG00000031268 #29 RDM1 (ENSPPYG00000008198) #30 LYZL6 (ENSPPYG00000008199) #31 CCL16 (ENSPPYG00000008200) #32 ENSPPYG00000040512 #33 CCL15 (ENSPPYG00000041781) #34 CCL23 (ENSPPYG00000008202) #35 CCL18 (ENSPPYG00000008203) #36 CCL3 (ENSPPYG00000038679) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00390000006867.e.a #15 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209.c #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##37 Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00390000006867.e.a #15 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209.c #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##37 Pan ANCESTRAL SPECIES 3 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00940000155067.a.b ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00390000010391.w.b ENSGT00390000006867.e.a #15 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b #19 ENSGT00390000016209.c #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.a.a ##37 Chimpanzee MODERN SPECIES 8 UNC45B (ENSPTRG00000009013) #12 ENSPTRG00000047307 SLFN5 (ENSPTRG00000009016) #13 SLFN11 (ENSPTRG00000009017) #17 ENSPTRG00000047496 ENSPTRG00000047996 #15 SLFN12 (ENSPTRG00000009018) #16 SLFN13 (ENSPTRG00000042109) #17 ENSPTRG00000044720 ENSPTRG00000052504 ENSPTRG00000048253 SLFN12L (ENSPTRG00000030902) #18 SLFN14 (ENSPTRG00000039969) #19 PEX12 (ENSPTRG00000009020) #21 ENSPTRG00000052160 AP2B1 (ENSPTRG00000009021) #22 RASL10B (ENSPTRG00000009022) #23 GAS2L2 (ENSPTRG00000009023) #24 C17H17orf50 (ENSPTRG00000009024) #25 MMP28 (ENSPTRG00000009025) #26 TAF15 (ENSPTRG00000009026) #27 HEATR9 (ENSPTRG00000009028) #28 CCL5 (ENSPTRG00000046869) #29 RDM1 (ENSPTRG00000009031) #30 LYZL6 (ENSPTRG00000009032) #31 CCL16 (ENSPTRG00000009033) #32 CCL14 (ENSPTRG00000033677) #33 CCL15 (ENSPTRG00000009034) #34 CCL23 (ENSPTRG00000009036) #35 CCL18 (ENSPTRG00000009037) #36 CCL3 (ENSPTRG00000009039) ##37 Bonobo MODERN SPECIES 8 UNC45B (ENSPPAG00000030112) #12 ENSPPAG00000025361 SLFN5 (ENSPPAG00000037908) #13 SLFN11 (ENSPPAG00000039146) #17 ENSPPAG00000038962 ENSPPAG00000024460 #15 SLFN12 (ENSPPAG00000008992) #16 SLFN13 (ENSPPAG00000039054) #17 ENSPPAG00000038367 SLFN12L (ENSPPAG00000026392) #18 ENSPPAG00000035752 ENSPPAG00000028828 SLFN14 (ENSPPAG00000043166) #19 PEX12 (ENSPPAG00000036383) #21 ENSPPAG00000029903 AP2B1 (ENSPPAG00000031208) #22 ENSPPAG00000040461 RASL10B (ENSPPAG00000028215) #23 GAS2L2 (ENSPPAG00000038597) #24 C17orf50 (ENSPPAG00000033236) #25 MMP28 (ENSPPAG00000029288) #26 ENSPPAG00000043510 #27 HEATR9 (ENSPPAG00000031757) #28 ENSPPAG00000043880 #29 RDM1 (ENSPPAG00000029969) #30 LYZL6 (ENSPPAG00000032212) #31 CCL16 (ENSPPAG00000035490) #32 CCL14 (ENSPPAG00000033863) #33 CCL15 (ENSPPAG00000034926) #34 CCL23 (ENSPPAG00000032672) #35 CCL18 (ENSPPAG00000038398) #36 Human MODERN SPECIES 8 LIG3 (ENSG00000005156) #7 RFFL (ENSG00000092871) #8 ENSG00000267618 RAD51D (ENSG00000185379) #9 FNDC8 (ENSG00000073598) #10 NLE1 (ENSG00000073536) #11 UNC45B (ENSG00000141161) #12 SLC35G3 (ENSG00000164729) SLFN5 (ENSG00000166750) #13 SLFN11 (ENSG00000172716) #17 SLFN12 (ENSG00000172123) #16 SLFN13 (ENSG00000154760) #17 SLFN12L (ENSG00000205045) #18 SLFN14 (ENSG00000236320) #19 PEX12 (ENSG00000108733) #21 AP2B1 (ENSG00000006125) #22 RASL10B (ENSG00000270885) #23 GAS2L2 (ENSG00000270765) #24 MMP28 (ENSG00000271447) #26 C17orf50 (ENSG00000270806) #25 TAF15 (ENSG00000270647) #27 HEATR9 (ENSG00000270379) #28 CCL5 (ENSG00000271503) RDM1 (ENSG00000278023) #30 LYZL6 (ENSG00000275722) #31 CCL16 (ENSG00000275152) #32 CCL14 (ENSG00000276409) #33 CCL15 (ENSG00000275718) #34 CCL23 (ENSG00000274736) #35 CCL18 (ENSG00000275385) #36 CCL3 (ENSG00000277632) #37 Gorilla MODERN SPECIES 18 UNC45B (ENSGGOG00000010763) #12 ENSGGOG00000040207 ENSGGOG00000009494 SLFN5 (ENSGGOG00000011259) #13 SLFN11 (ENSGGOG00000034948) #17 ENSGGOG00000041052 ENSGGOG00000038915 ##15 SLFN12 (ENSGGOG00000001620) #16 SLFN13 (ENSGGOG00000014291) #17 ENSGGOG00000042321 ENSGGOG00000041375 SLFN12L (ENSGGOG00000002881) #18 ENSGGOG00000027717 #19 ENSGGOG00000026951 #19 PEX12 (ENSGGOG00000003330) #21 AP2B1 (ENSGGOG00000015593) #22 RASL10B (ENSGGOG00000015607) #23 GAS2L2 (ENSGGOG00000015608) #24 C17orf50 (ENSGGOG00000015614) #25 MMP28 (ENSGGOG00000015617) #26 TAF15 (ENSGGOG00000005693) #27 HEATR9 (ENSGGOG00000007596) #28 ENSGGOG00000007604 RDM1 (ENSGGOG00000010584) #30 LYZL6 (ENSGGOG00000010460) #31 CCL16 (ENSGGOG00000038395) #32 CCL14 (ENSGGOG00000002497) #33 CCL15 (ENSGGOG00000002498) #34 CCL23 (ENSGGOG00000003575) #35 CCL18 (ENSGGOG00000011865) #36 CCL3 (ENSGGOG00000026449) #37 Gibbon DUPLICATION Gibbon MODERN SPECIES 111 SLFN5 (ENSNLEG00000013893) #13 SLFN11 (ENSNLEG00000013909) #17 SLFN13 (ENSNLEG00000032280) #17 SLFN14 (ENSNLEG00000013925) #19 PEX12 (ENSNLEG00000013933) #21 ENSNLEG00000013939 #22 C17orf50 (ENSNLEG00000014035) #25 MMP28 (ENSNLEG00000014038) #26 TAF15 (ENSNLEG00000014063) #27 HEATR9 (ENSNLEG00000014122) #28 ENSNLEG00000014169 #29 RDM1 (ENSNLEG00000014173) #30 LYZL6 (ENSNLEG00000014207) #31 ENSNLEG00000014211 #32 ENSNLEG00000014214 #33 CCL15 (ENSNLEG00000014223) #34 CCL23 (ENSNLEG00000014228) #35 CCL18 (ENSNLEG00000014237) #36 ENSNLEG00000035999 ##37 ENSNLEG00000014239 ##37 ENSNLEG00000014251 ##37 Gibbon MODERN SPECIES 24 ADGRL3 (ENSNLEG00000008957) ENSNLEG00000033354 TECRL (ENSNLEG00000008982) ENSNLEG00000030813 EPHA5 (ENSNLEG00000008987) CENPC (ENSNLEG00000009058) STAP1 (ENSNLEG00000009082) UBA6 (ENSNLEG00000009086) GNRHR (ENSNLEG00000009158) TMPRSS11D (ENSNLEG00000009163) TMPRSS11A (ENSNLEG00000009182) TMPRSS11F (ENSNLEG00000009193) YTHDC1 (ENSNLEG00000009202) TMPRSS11E (ENSNLEG00000009223) UGT2B15 (ENSNLEG00000009240) ENSNLEG00000009256 #22 LRP8 (ENSNLEG00000017986) MAGOH (ENSNLEG00000017987) CZIB (ENSNLEG00000017988) ENSNLEG00000028350 CPT2 (ENSNLEG00000017989) SLC1A7 (ENSNLEG00000017990) PODN (ENSNLEG00000017991) SCP2 (ENSNLEG00000017992) ECHDC2 (ENSNLEG00000036128) ENSNLEG00000033930 ZYG11B (ENSNLEG00000017994) COA7 (ENSNLEG00000036297) SHISAL2A (ENSNLEG00000017996) GPX7 (ENSNLEG00000017997) ENSNLEG00000035494 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01050000245362 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT01100000263482.C.c.b.b.a.b.a.a.d ##37 Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458.b #10 ENSGT00390000006458.a.a #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 Cercopithecinae_b ANCESTRAL SPECIES 33 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458.b #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a.cb #17 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a.bb.b #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 Cercopithecinae_d ANCESTRAL SPECIES 98 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458.b #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a.bb.b #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 Sooty mangabey MODERN SPECIES 145 LIG3 (ENSCATG00000044619) #7 RFFL (ENSCATG00000037355) #8 RAD51D (ENSCATG00000034042) #9 ENSCATG00000031430 #10 ENSCATG00000034997 #10 NLE1 (ENSCATG00000038372) #11 UNC45B (ENSCATG00000038004) #12 SLFN5 (ENSCATG00000042531) #13 SLFN12 (ENSCATG00000037618) #16 SLFN13 (ENSCATG00000013030) #17 ENSCATG00000002686 SLFN12L (ENSCATG00000041013) #18 SLFN14 (ENSCATG00000021975) #19 PEX12 (ENSCATG00000040975) #21 ENSCATG00000044039 AP2B1 (ENSCATG00000031381) #22 RASL10B (ENSCATG00000037782) #23 GAS2L2 (ENSCATG00000032299) #24 C17orf50 (ENSCATG00000039669) #25 MMP28 (ENSCATG00000045014) #26 TAF15 (ENSCATG00000044848) #27 HEATR9 (ENSCATG00000037222) #28 ENSCATG00000042685 #29 RDM1 (ENSCATG00000044451) #30 LYZL6 (ENSCATG00000043618) #31 CCL16 (ENSCATG00000014237) #32 CCL14 (ENSCATG00000032451) #33 CCL15 (ENSCATG00000029737) #34 CCL23 (ENSCATG00000040222) #35 CCL18 (ENSCATG00000031865) #36 CCL3L3 (ENSCATG00000026347) ##37 Drill MODERN SPECIES 1298 SLFN12 (ENSMLEG00000031521) #16 ENSMLEG00000040760 #17 ENSMLEG00000034690 SLFN12L (ENSMLEG00000025692) #18 SLFN14 (ENSMLEG00000028994) #19 PEX12 (ENSMLEG00000028726) #21 ENSMLEG00000043929 AP2B1 (ENSMLEG00000042195) #22 RASL10B (ENSMLEG00000039957) #23 GAS2L2 (ENSMLEG00000028993) #24 MMP28 (ENSMLEG00000035285) #26 TAF15 (ENSMLEG00000028534) #27 HEATR9 (ENSMLEG00000034282) #28 ENSMLEG00000033238 #29 RDM1 (ENSMLEG00000041158) #30 LYZL6 (ENSMLEG00000034002) #31 CCL16 (ENSMLEG00000036599) #32 CCL14 (ENSMLEG00000027250) #33 CCL15 (ENSMLEG00000029997) #34 CCL23 (ENSMLEG00000036290) #35 CCL18 (ENSMLEG00000036282) #36 ENSMLEG00000043882 ##37 ENSMLEG00000033437 Olive baboon MODERN SPECIES 8 ZNF830 (ENSPANG00000023017) LIG3 (ENSPANG00000022999) #7 RFFL (ENSPANG00000023003) #8 RAD51D (ENSPANG00000022997) #9 FNDC8 (ENSPANG00000022990) #10 NLE1 (ENSPANG00000022991) #11 UNC45B (ENSPANG00000022993) #12 SLFN5 (ENSPANG00000022994) #13 SLFN11 (ENSPANG00000022995) #17 SLFN12 (ENSPANG00000022996) #16 SLFN13 (ENSPANG00000048259) #17 SLFN12L (ENSPANG00000030174) #18 ENSPANG00000032536 SLFN14 (ENSPANG00000022979) #19 PEX12 (ENSPANG00000022980) #21 AP2B1 (ENSPANG00000022982) #22 RASL10B (ENSPANG00000046564) #23 GAS2L2 (ENSPANG00000022978) #24 C17orf50 (ENSPANG00000022929) #25 MMP28 (ENSPANG00000022977) #26 TAF15 (ENSPANG00000022930) #27 HEATR9 (ENSPANG00000022932) #28 ENSPANG00000030339 #29 RDM1 (ENSPANG00000022933) #30 LYZL6 (ENSPANG00000022934) #31 CCL16 (ENSPANG00000022935) #32 CCL14 (ENSPANG00000022936) #33 CCL15 (ENSPANG00000022937) #34 ENSPANG00000022938 CCL18 (ENSPANG00000041083) #36 HEATR6 (ENSPANG00000009798) Macaca ANCESTRAL SPECIES 4 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458.a.a #10 ENSGT00390000006458.a.b #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00940000153342.b.x ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00390000010799.u.b.a.a.b.p.b ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT01100000263482.C.c.b.a.b.a.h #35 ENSGT01100000263482.C.c.b.b.a.b.b #36 Macaca_a ANCESTRAL SPECIES 4 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00390000006458.a.b #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.b ENSGT00410000025651.A.b.b #19 ENSGT00940000163244.d.b.b.b.a.a ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.a.b.a ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a.g #34 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b.b #36 Crab-eating macaque MODERN SPECIES 7 ZNF830 (ENSMFAG00000025776) LIG3 (ENSMFAG00000036202) #7 ENSMFAG00000036080 #8 FNDC8 (ENSMFAG00000000308) #10 NLE1 (ENSMFAG00000037776) #11 UNC45B (ENSMFAG00000036065) #12 SLFN5 (ENSMFAG00000034231) #13 SLFN13 (ENSMFAG00000000114) #17 SLFN12 (ENSMFAG00000001223) #16 SLFN12L (ENSMFAG00000050765) #18 ENSMFAG00000064945 ENSMFAG00000059172 SLFN14 (ENSMFAG00000037905) #19 ENSMFAG00000059317 PEX12 (ENSMFAG00000039486) #21 AP2B1 (ENSMFAG00000032866) #22 RASL10B (ENSMFAG00000059499) #23 GAS2L2 (ENSMFAG00000046155) #24 C17orf50 (ENSMFAG00000055962) #25 MMP28 (ENSMFAG00000003523) #26 TAF15 (ENSMFAG00000041941) #27 HEATR9 (ENSMFAG00000001762) #28 ENSMFAG00000031627 #29 RDM1 (ENSMFAG00000032968) #30 ENSMFAG00000054146 LYZL6 (ENSMFAG00000044524) #31 CCL16 (ENSMFAG00000002269) #32 CCL14 (ENSMFAG00000000804) #33 CCL15 (ENSMFAG00000033315) #34 ENSMFAG00000003696 CCL18 (ENSMFAG00000036319) #36 Rhesus MODERN SPECIES 7 ZNF830 (ENSMMUG00000006402) LIG3 (ENSMMUG00000004794) #7 RFFL (ENSMMUG00000000750) #8 FNDC8 (ENSMMUG00000000744) #10 NLE1 (ENSMMUG00000000751) #11 UNC45B (ENSMMUG00000005170) #12 SLFN5 (ENSMMUG00000010082) #13 SLFN13 (ENSMMUG00000037555) #17 SLFN12 (ENSMMUG00000005550) #16 SLFN12L (ENSMMUG00000060439) #18 ENSMMUG00000055108 ENSMMUG00000062650 SLFN14 (ENSMMUG00000048316) #19 ENSMMUG00000031736 PEX12 (ENSMMUG00000006047) #21 AP2B1 (ENSMMUG00000006048) #22 RASL10B (ENSMMUG00000013143) #23 GAS2L2 (ENSMMUG00000013142) #24 C16H17orf50 (ENSMMUG00000022228) #25 MMP28 (ENSMMUG00000022229) #26 TAF15 (ENSMMUG00000047780) #27 HEATR9 (ENSMMUG00000022233) #28 CCL5 (ENSMMUG00000054796) #29 RDM1 (ENSMMUG00000006847) #30 ENSMMUG00000054146 LYZL6 (ENSMMUG00000006850) #31 CCL16 (ENSMMUG00000045883) #32 CCL14 (ENSMMUG00000002466) #33 CCL15 (ENSMMUG00000039864) #34 CCL23 (ENSMMUG00000002467) CCL18 (ENSMMUG00000047114) #36 Pig-tailed macaque MODERN SPECIES 116 LIG3 (ENSMNEG00000039607) #7 RFFL (ENSMNEG00000031746) #8 RAD51D (ENSMNEG00000028511) #9 FNDC8 (ENSMNEG00000041134) #10 NLE1 (ENSMNEG00000032551) #11 UNC45B (ENSMNEG00000036484) #12 SLFN5 (ENSMNEG00000032653) #13 SLFN12 (ENSMNEG00000044024) #16 SLFN13 (ENSMNEG00000033683) #17 ENSMNEG00000029409 ENSMNEG00000045423 SLFN12L (ENSMNEG00000040209) #18 SLFN14 (ENSMNEG00000007518) #19 PEX12 (ENSMNEG00000034562) #21 ENSMNEG00000029590 AP2B1 (ENSMNEG00000042752) #22 RASL10B (ENSMNEG00000039335) #23 GAS2L2 (ENSMNEG00000039828) #24 C17orf50 (ENSMNEG00000036265) #25 MMP28 (ENSMNEG00000035643) #26 TAF15 (ENSMNEG00000044227) #27 HEATR9 (ENSMNEG00000029332) #28 ENSMNEG00000034547 #29 RDM1 (ENSMNEG00000039977) #30 LYZL6 (ENSMNEG00000036987) #31 CCL16 (ENSMNEG00000033984) #32 CCL14 (ENSMNEG00000045147) #33 CCL15 (ENSMNEG00000043539) #34 CCL23 (ENSMNEG00000034456) #35 CCL18 (ENSMNEG00000030173) #36 ENSMNEG00000034156 ##37 Vervet Monkey MODERN SPECIES 7 CCT6B (ENSCSAG00000006334) ZNF830 (ENSCSAG00000000556) LIG3 (ENSCSAG00000006328) #7 RFFL (ENSCSAG00000006321) #8 RAD51D (ENSCSAG00000006316) #9 FNDC8 (ENSCSAG00000006312) #10 NLE1 (ENSCSAG00000006308) #11 UNC45B (ENSCSAG00000006303) #12 SLFN5 (ENSCSAG00000006300) #13 SLFN11 (ENSCSAG00000006296) #17 SLFN12 (ENSCSAG00000006292) #16 SLFN13 (ENSCSAG00000006288) #17 SLFN12L (ENSCSAG00000006280) #18 SLFN14 (ENSCSAG00000006274) #19 PEX12 (ENSCSAG00000006267) #21 AP2B1 (ENSCSAG00000006260) #22 RASL10B (ENSCSAG00000006252) #23 GAS2L2 (ENSCSAG00000006249) #24 C17orf50 (ENSCSAG00000006245) #25 MMP28 (ENSCSAG00000006243) #26 TAF15 (ENSCSAG00000006241) #27 HEATR9 (ENSCSAG00000006228) #28 ENSCSAG00000006213 #29 RDM1 (ENSCSAG00000006209) #30 LYZL6 (ENSCSAG00000006206) #31 CCL16 (ENSCSAG00000006203) #32 CCL14 (ENSCSAG00000006201) #33 CCL15 (ENSCSAG00000006198) #34 CCL18 (ENSCSAG00000006194) #36 ENSCSAG00000006191 ##37 ENSCSAG00000006185 Rhinopithecus ANCESTRAL SPECIES 320 ENSGT00410000025651.A.b.a.a.b.c #16 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00390000010391.w.b ENSGT00410000025651.A.b.a.a.b.d #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.a #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000168309 ENSGT00390000018397 #30 ENSGT00940000161690 #31 Black snub-nosed monkey MODERN SPECIES 1029 SLFN11 (ENSRBIG00000034584) #17 ENSRBIG00000017577 ENSRBIG00000024045 SLFN12 (ENSRBIG00000031538) #16 SLFN13 (ENSRBIG00000043402) #17 SLFN12L (ENSRBIG00000038479) #18 SLFN14 (ENSRBIG00000029031) #19 PEX12 (ENSRBIG00000013732) #21 AP2B1 (ENSRBIG00000031992) #22 RASL10B (ENSRBIG00000038353) #23 GAS2L2 (ENSRBIG00000026402) #24 C17orf50 (ENSRBIG00000043080) #25 MMP28 (ENSRBIG00000042961) #26 TAF15 (ENSRBIG00000043192) #27 HEATR9 (ENSRBIG00000034249) #28 ENSRBIG00000039186 #29 ENSRBIG00000033529 RDM1 (ENSRBIG00000030000) #30 LYZL6 (ENSRBIG00000029037) #31 Golden snub-nosed monkey MODERN SPECIES 2519 ENSRROG00000020738 SLFN12 (ENSRROG00000018265) #16 SLFN13 (ENSRROG00000018236) #17 ENSRROG00000043072 ENSRROG00000001089 SLFN12L (ENSRROG00000039374) #18 ENSRROG00000045772 SLFN14 (ENSRROG00000042714) #19 PEX12 (ENSRROG00000040662) #21 AP2B1 (ENSRROG00000030200) #22 RASL10B (ENSRROG00000030917) #23 GAS2L2 (ENSRROG00000031550) #24 C17orf50 (ENSRROG00000027811) #25 MMP28 (ENSRROG00000029324) #26 TAF15 (ENSRROG00000029426) #27 HEATR9 (ENSRROG00000010829) #28 ENSRROG00000029256 RDM1 (ENSRROG00000035242) #30 LYZL6 (ENSRROG00000037519) #31 Catarrhini ANCESTRAL SPECIES ENSGT00940000155206.d.b ##22 Hominoidea ANCESTRAL SPECIES 164 ENSGT00940000155206.d.b ##22 ENSGT00940000153309.c.b.a.a Hominidae ANCESTRAL SPECIES 163 ENSGT00940000155206.d.b ##22 ENSGT00940000153309.c.b.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 57 ENSGT00940000155206.d.b ##22 ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b ENSGT00940000158335.d Homo/Pan group ANCESTRAL SPECIES 76 ENSGT00940000155206.d.b ##22 ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b Pan ANCESTRAL SPECIES 6 ENSGT00390000003231.a.f.b ENSGT00390000018706.m.b.b.l.b ENSGT00950000183123.h.b ENSGT00940000161632.c ENSGT00940000158987 ENSGT00940000159060 ENSGT00940000159149 ENSGT00940000159092 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000153239.B.i.a.b ENSGT00940000157822 ENSGT00940000163054 ENSGT00730000111097.e ENSGT00940000162927 ENSGT00940000155206.d.b ##22 ENSGT00940000153889.e.a.a ENSGT00950000182869.e.a.b.sb.b.a.a.b.b ENSGT00940000158335.c ENSGT00940000162668 ENSGT00940000154977.l.b.b ENSGT00940000165485 ENSGT00390000003732 ENSGT00950000183119.a.e.a.d.a.a ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 ENSGT00940000159611 ENSGT00950000183121.b.b.b.a Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 972 ENSPTRG00000050488 ENSPTRG00000052173 NOX1 (ENSPTRG00000048908) CSTF2 (ENSPTRG00000022090) SYTL4 (ENSPTRG00000022089) SRPX2 (ENSPTRG00000022088) TSPAN6 (ENSPTRG00000022087) TNMD (ENSPTRG00000022086) PCDH19 (ENSPTRG00000022085) ENSPTRG00000043192 DIAPH2 (ENSPTRG00000022082) ENSPTRG00000048048 ENSPTRG00000033789 FAM133A (ENSPTRG00000044529) NAP1L3 (ENSPTRG00000022080) ENSPTRG00000043794 ##22 ENSPTRG00000043870 ENSPTRG00000022079 PABPC5 (ENSPTRG00000022078) ENSPTRG00000045302 ENSPTRG00000044589 CPXCR1 (ENSPTRG00000022076) ENSPTRG00000049218 KLHL4 (ENSPTRG00000022075) DACH2 (ENSPTRG00000022073) ENSPTRG00000052049 CHM (ENSPTRG00000022071) POF1B (ENSPTRG00000022070) ZNF711 (ENSPTRG00000022069) ENSPTRG00000022068 ENSPTRG00000043670 Chimpanzee MODERN SPECIES 843 ENSPTRG00000047694 ##22 ENSPTRG00000047333 ENSPTRG00000051629 Bonobo MODERN SPECIES 369 XKRX (ENSPPAG00000030677) ENSPPAG00000031058 ENSPPAG00000027791 NOX1 (ENSPPAG00000021977) CSTF2 (ENSPPAG00000031804) SYTL4 (ENSPPAG00000026955) SRPX2 (ENSPPAG00000039226) TSPAN6 (ENSPPAG00000038316) TNMD (ENSPPAG00000035804) PCDH19 (ENSPPAG00000039228) ENSPPAG00000034644 DIAPH2 (ENSPPAG00000040909) ENSPPAG00000038822 FAM133A (ENSPPAG00000017635) NAP1L3 (ENSPPAG00000019923) ENSPPAG00000007354 ##22 ENSPPAG00000003031 ENSPPAG00000040878 ENSPPAG00000030962 ENSPPAG00000043443 PABPC5 (ENSPPAG00000007378) ENSPPAG00000041507 ENSPPAG00000038346 CPXCR1 (ENSPPAG00000016441) ENSPPAG00000026574 KLHL4 (ENSPPAG00000043431) ENSPPAG00000036042 ENSPPAG00000024013 CHM (ENSPPAG00000034301) ENSPPAG00000028498 POF1B (ENSPPAG00000033485) Gorilla MODERN SPECIES 523 ENSGGOG00000027879 NOX1 (ENSGGOG00000006886) CSTF2 (ENSGGOG00000022267) SYTL4 (ENSGGOG00000001159) SRPX2 (ENSGGOG00000010009) TSPAN6 (ENSGGOG00000010003) TNMD (ENSGGOG00000017007) PCDH19 (ENSGGOG00000001810) ENSGGOG00000027167 ENSGGOG00000038151 DIAPH2 (ENSGGOG00000002859) ENSGGOG00000038270 FAM133A (ENSGGOG00000043974) NAP1L3 (ENSGGOG00000016989) ENSGGOG00000025902 ENSGGOG00000039790 ##22 ENSGGOG00000025897 ENSGGOG00000042618 ENSGGOG00000008584 PABPC5 (ENSGGOG00000007622) ENSGGOG00000037634 ENSGGOG00000036979 CPXCR1 (ENSGGOG00000026865) RPSA (ENSGGOG00000036643) KLHL4 (ENSGGOG00000002307) DACH2 (ENSGGOG00000007231) ENSGGOG00000040803 CHM (ENSGGOG00000022912) POF1B (ENSGGOG00000016908) ZNF711 (ENSGGOG00000006110) SATL1 (ENSGGOG00000016333) Gibbon MODERN SPECIES 449 ENSNLEG00000034385 NOX1 (ENSNLEG00000007516) CSTF2 (ENSNLEG00000007510) SYTL4 (ENSNLEG00000007507) SRPX2 (ENSNLEG00000007506) TSPAN6 (ENSNLEG00000007505) TNMD (ENSNLEG00000007504) PCDH19 (ENSNLEG00000007503) ENSNLEG00000013567 ENSNLEG00000030185 DIAPH2 (ENSNLEG00000000884) ENSNLEG00000019052 FAM133A (ENSNLEG00000019038) NAP1L3 (ENSNLEG00000000881) ENSNLEG00000034978 ENSNLEG00000029399 ##22 ENSNLEG00000029321 PABPC5 (ENSNLEG00000035086) ENSNLEG00000036286 ENSNLEG00000035924 ENSNLEG00000027997 CPXCR1 (ENSNLEG00000002894) KLHL4 (ENSNLEG00000002824) ENSNLEG00000002822 DACH2 (ENSNLEG00000002793) ENSNLEG00000027890 CHM (ENSNLEG00000002762) ENSNLEG00000032608 POF1B (ENSNLEG00000002694) ZNF711 (ENSNLEG00000002656) APOOL (ENSNLEG00000002634) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000155206.d.c #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155206.d.c #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155206.d.c #22 Bolivian squirrel monkey MODERN SPECIES 74 SLFN5 (ENSSBOG00000021890) #13 SLFN11 (ENSSBOG00000023846) #17 SLFN14 (ENSSBOG00000027643) #19 PEX12 (ENSSBOG00000032853) #21 AP2B1 (ENSSBOG00000034151) #22 ENSSBOG00000021189 RASL10B (ENSSBOG00000027306) #23 GAS2L2 (ENSSBOG00000033199) #24 MMP28 (ENSSBOG00000023020) #26 ENSSBOG00000032185 #27 HEATR9 (ENSSBOG00000030182) #28 ENSSBOG00000033218 #29 RDM1 (ENSSBOG00000028130) #30 LYZL6 (ENSSBOG00000029469) #31 CCL16 (ENSSBOG00000025408) #32 CCL14 (ENSSBOG00000034435) #33 ENSSBOG00000023945 ENSSBOG00000023104 ENSSBOG00000033067 ENSSBOG00000008746 Capuchin MODERN SPECIES 305 ENSCCAG00000023038 #22 ENSCCAG00000022234 ENSCCAG00000029629 CPXCR1 (ENSCCAG00000027844) Mas night monkey MODERN SPECIES 1179 ENSANAG00000037710 FAM133A (ENSANAG00000019379) NAP1L3 (ENSANAG00000029163) ENSANAG00000031749 ENSANAG00000023977 ENSANAG00000031272 PABPC5 (ENSANAG00000005063) ENSANAG00000013923 ENSANAG00000031195 ENSANAG00000022190 ENSANAG00000032607 #22 ENSANAG00000026733 ENSANAG00000031886 ENSANAG00000021711 CPXCR1 (ENSANAG00000025456) ENSANAG00000021853 KLHL4 (ENSANAG00000028429) ENSANAG00000029697 CHM (ENSANAG00000025422) POF1B (ENSANAG00000027640) ZNF711 (ENSANAG00000027967) Platyrrhini ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165089 ENSGT01100000263482.C.c.b.b.a.b.a #37 ENSGT01100000263482.C.c.b.b.a.b.b #36 Cebidae ANCESTRAL SPECIES 10 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165089 ENSGT01100000263482.C.c.b.b.a.b.a #37 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT00520000060616 Cebidae_a ANCESTRAL SPECIES 1 ENSGT01060000248892 ENSGT01100000263482.F ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018397 #30 ENSGT00940000161690 #31 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165089 ENSGT01100000263482.C.c.b.b.a.b.a #37 ENSGT01100000263482.C.c.b.b.a.b.b #36 ENSGT00390000016675 Capuchin DUPLICATION Capuchin MODERN SPECIES 85 ENSCCAG00000006712 ENSCCAG00000027028 TMEM132E (ENSCCAG00000032199) ENSCCAG00000025546 CCT6B (ENSCCAG00000033971) LIG3 (ENSCCAG00000004189) #7 RFFL (ENSCCAG00000015388) #8 RAD51D (ENSCCAG00000022233) #9 FNDC8 (ENSCCAG00000021053) #10 NLE1 (ENSCCAG00000030907) #11 UNC45B (ENSCCAG00000020566) #12 SLFN5 (ENSCCAG00000033924) #13 SLFN11 (ENSCCAG00000013862) #17 SLFN14 (ENSCCAG00000024954) #19 PEX12 (ENSCCAG00000022946) #21 AP2B1 (ENSCCAG00000035115) #22 RASL10B (ENSCCAG00000029475) #23 GAS2L2 (ENSCCAG00000025203) #24 C17orf50 (ENSCCAG00000024927) #25 MMP28 (ENSCCAG00000027683) #26 TAF15 (ENSCCAG00000036025) #27 HEATR9 (ENSCCAG00000033181) #28 ENSCCAG00000034447 #29 RDM1 (ENSCCAG00000035763) #30 ENSCCAG00000036951 #31 ENSCCAG00000030889 Capuchin MODERN SPECIES 5 MBOAT4 (ENSCCAG00000037994) LEPROTL1 (ENSCCAG00000033916) SARAF (ENSCCAG00000027268) DUSP4 (ENSCCAG00000036753) TNKS (ENSCCAG00000020538) PPP1R3B (ENSCCAG00000001875) ERI1 (ENSCCAG00000032048) MFHAS1 (ENSCCAG00000024993) ENSCCAG00000032742 PRAG1 (ENSCCAG00000025342) LONRF1 (ENSCCAG00000019553) TRMT9B (ENSCCAG00000032783) DLC1 (ENSCCAG00000008032) ENSCCAG00000022045 ENSCCAG00000033627 ENSCCAG00000028915 #22 SGCZ (ENSCCAG00000027911) TUSC3 (ENSCCAG00000021149) Marmoset MODERN SPECIES 15 ENSCJAG00000003480 ANK2 (ENSCJAG00000003564) ENSCJAG00000083059 ENSCJAG00000081336 LARP7 (ENSCJAG00000003711) ENSCJAG00000072826 ZGRF1 (ENSCJAG00000003724) ENSCJAG00000073748 NEUROG2 (ENSCJAG00000003772) ENSCJAG00000056186 ALPK1 (ENSCJAG00000003780) ENSCJAG00000042606 TIFA (ENSCJAG00000038735) AP1AR (ENSCJAG00000043368) ENSCJAG00000083097 ENSCJAG00000077926 #22 ENSCJAG00000083735 ENSCJAG00000003822 ENSCJAG00000060028 PITX2 (ENSCJAG00000003830) ENPEP (ENSCJAG00000003856) ENSCJAG00000074022 ENSCJAG00000071394 ELOVL6 (ENSCJAG00000038180) ENSCJAG00000063162 ENSCJAG00000078793 EGF (ENSCJAG00000003982) LRIT3 (ENSCJAG00000004015) RRH (ENSCJAG00000004028) GAR1 (ENSCJAG00000082261) CFI (ENSCJAG00000004249) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1054 ENSANAG00000038143 SPRY1 (ENSANAG00000019703) SPATA5 (ENSANAG00000024588) NUDT6 (ENSANAG00000014690) FGF2 (ENSANAG00000037733) IL21 (ENSANAG00000033883) IL2 (ENSANAG00000026729) ENSANAG00000034045 BLTP1 (ENSANAG00000034336) TRPC3 (ENSANAG00000032754) BBS7 (ENSANAG00000037930) ENSANAG00000029372 EXOSC9 (ENSANAG00000024817) ENSANAG00000027799 ANXA5 (ENSANAG00000019060) ENSANAG00000037751 #22 QRFPR (ENSANAG00000036183) TNIP3 (ENSANAG00000021165) NDNF (ENSANAG00000021660) PRDM5 (ENSANAG00000027411) MAD2L1 (ENSANAG00000022503) PDE5A (ENSANAG00000036136) ENSANAG00000036422 ENSANAG00000003057 C4orf3 (ENSANAG00000034334) USP53 (ENSANAG00000037495) MYOZ2 (ENSANAG00000035756) SYNPO2 (ENSANAG00000022499) SEC24D (ENSANAG00000028409) METTL14 (ENSANAG00000024273) PRSS12 (ENSANAG00000024981) Mas night monkey MODERN SPECIES 805 LIG3 (ENSANAG00000027289) #7 RFFL (ENSANAG00000024559) #8 RAD51D (ENSANAG00000026327) #9 FNDC8 (ENSANAG00000038020) #10 NLE1 (ENSANAG00000029916) #11 UNC45B (ENSANAG00000029104) #12 ENSANAG00000018728 ENSANAG00000020029 ENSANAG00000019510 SLFN5 (ENSANAG00000020516) #13 SLFN11 (ENSANAG00000018777) #17 ENSANAG00000038116 SLFN14 (ENSANAG00000038117) #19 PEX12 (ENSANAG00000007379) #21 ENSANAG00000019452 #22 RASL10B (ENSANAG00000022158) #23 GAS2L2 (ENSANAG00000029020) #24 C17orf50 (ENSANAG00000033358) #25 MMP28 (ENSANAG00000037562) #26 TAF15 (ENSANAG00000020904) #27 HEATR9 (ENSANAG00000034198) #28 ENSANAG00000038037 #29 RDM1 (ENSANAG00000032752) #30 LYZL6 (ENSANAG00000034516) #31 CCL16 (ENSANAG00000024769) #32 CCL14 (ENSANAG00000034460) #33 ENSANAG00000038290 #35 CCL4L2 (ENSANAG00000032119) ##37 ENSANAG00000020518 #37 ENSANAG00000036612 #36 Tarsier MODERN SPECIES 7253 RAD51D (ENSTSYG00000002439) #9 FNDC8 (ENSTSYG00000033775) #10 NLE1 (ENSTSYG00000005707) #11 UNC45B (ENSTSYG00000005718) #12 ENSTSYG00000012984 ENSTSYG00000012957 #13 ENSTSYG00000027201 SLFN13 (ENSTSYG00000035997) #17 ENSTSYG00000032197 #18 SLFN14 (ENSTSYG00000026907) #19 PEX12 (ENSTSYG00000013016) #21 AP2B1 (ENSTSYG00000013030) #22 RASL10B (ENSTSYG00000026278) #23 ENSTSYG00000036881 ANXA9 (ENSTSYG00000012630) Strepsirrhini ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945 Lemuriformes ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945 Lemuriformes_a ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000018505.b.j ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 319 ENSPCOG00000024010 RASA1 (ENSPCOG00000002214) TMEM161B (ENSPCOG00000014869) ENSPCOG00000019704 MEF2C (ENSPCOG00000015854) CETN3 (ENSPCOG00000008573) MBLAC2 (ENSPCOG00000024583) ENSPCOG00000023427 LYSMD3 (ENSPCOG00000009535) ENSPCOG00000016607 ENSPCOG00000026419 ARRDC3 (ENSPCOG00000017963) ENSPCOG00000019606 #22 ENSPCOG00000028394 NR2F1 (ENSPCOG00000017525) FAM172A (ENSPCOG00000024072) KIAA0825 (ENSPCOG00000021681) SLF1 (ENSPCOG00000019438) MCTP1 (ENSPCOG00000027694) SKIC3 (ENSPCOG00000018234) ARSK (ENSPCOG00000017803) SPATA9 (ENSPCOG00000018648) RHOBTB3 (ENSPCOG00000014621) GLRX (ENSPCOG00000019782) Coquerels sifaka MODERN SPECIES 414 CCT6B (ENSPCOG00000022222) LIG3 (ENSPCOG00000025771) #7 RFFL (ENSPCOG00000014273) #8 RAD51D (ENSPCOG00000019951) #9 FNDC8 (ENSPCOG00000025950) #10 NLE1 (ENSPCOG00000016524) #11 UNC45B (ENSPCOG00000026606) #12 SLFN5 (ENSPCOG00000000263) #13 SLFN13 (ENSPCOG00000015060) #17 SLFN14 (ENSPCOG00000019040) #19 PEX12 (ENSPCOG00000018773) #21 ENSPCOG00000021710 #22 RASL10B (ENSPCOG00000010262) #23 GAS2L2 (ENSPCOG00000008823) #24 ENSPCOG00000017213 MMP28 (ENSPCOG00000021300) #26 TAF15 (ENSPCOG00000007032) #27 HEATR9 (ENSPCOG00000020659) #28 ENSPCOG00000009360 #29 ENSPCOG00000012531 CCL16 (ENSPCOG00000015310) #32 CCL14 (ENSPCOG00000000123) #33 ENSPCOG00000018507 #35 ENSPCOG00000017450 ##37 ENSPCOG00000026656 ##37 HEATR6 (ENSPCOG00000007339) HNF1B (ENSPCOG00000023250) Greater bamboo lemur MODERN SPECIES 167 ENSPSMG00000017180 CCT6B (ENSPSMG00000017271) ZNF830 (ENSPSMG00000017386) LIG3 (ENSPSMG00000017498) #7 RFFL (ENSPSMG00000017643) #8 RAD51D (ENSPSMG00000017716) #9 FNDC8 (ENSPSMG00000017734) #10 NLE1 (ENSPSMG00000017794) #11 UNC45B (ENSPSMG00000017855) #12 ENSPSMG00000017874 #13 ENSPSMG00000017877 #13 SLFN13 (ENSPSMG00000017890) #17 ENSPSMG00000017899 SLFN14 (ENSPSMG00000017906) #19 PEX12 (ENSPSMG00000017923) #21 AP2B1 (ENSPSMG00000018648) #22 RASL10B (ENSPSMG00000019772) #23 GAS2L2 (ENSPSMG00000019805) #24 C17orf50 (ENSPSMG00000019813) #25 MMP28 (ENSPSMG00000019848) #26 TAF15 (ENSPSMG00000019965) #27 HEATR9 (ENSPSMG00000019980) #28 ENSPSMG00000019990 #29 ENSPSMG00000020004 CCL16 (ENSPSMG00000020013) #32 CCL14 (ENSPSMG00000020021) #33 ENSPSMG00000020027 #35 ENSPSMG00000020033 #35 ENSPSMG00000020039 ##37 ENSPSMG00000020065 #37 ENSPSMG00000020079 ##37 Mouse lemur MODERN SPECIES 7 CCL8 (ENSMICG00000037888) ##37 CCL13 (ENSMICG00000036035) ##37 CCL1 (ENSMICG00000042374) ##37 TMEM132E (ENSMICG00000003085) CCT6B (ENSMICG00000035976) LIG3 (ENSMICG00000006814) #7 RFFL (ENSMICG00000006829) #8 RAD51D (ENSMICG00000043657) #9 FNDC8 (ENSMICG00000044023) #10 NLE1 (ENSMICG00000001256) #11 UNC45B (ENSMICG00000001264) #12 SLFN5 (ENSMICG00000033107) #13 SLFN13 (ENSMICG00000047620) #17 SLFN14 (ENSMICG00000017034) #19 PEX12 (ENSMICG00000045292) #21 AP2B1 (ENSMICG00000017045) #22 RASL10B (ENSMICG00000034231) #23 ENSMICG00000030480 C17orf50 (ENSMICG00000017049) #25 MMP28 (ENSMICG00000017052) #26 TAF15 (ENSMICG00000017057) #27 HEATR9 (ENSMICG00000001796) #28 ENSMICG00000042451 #29 CCL16 (ENSMICG00000029697) #32 CCL14 (ENSMICG00000027552) #33 ENSMICG00000029419 #35 ENSMICG00000042571 #35 ENSMICG00000038715 ##37 ENSMICG00000008737 ##37 ENSMICG00000041554 ##37 HEATR6 (ENSMICG00000008703) Bushbaby MODERN SPECIES 209 SLFN14 (ENSOGAG00000006765) #19 PEX12 (ENSOGAG00000004009) #21 AP2B1 (ENSOGAG00000005826) #22 RASL10B (ENSOGAG00000005829) #23 GAS2L2 (ENSOGAG00000031874) #24 MMP28 (ENSOGAG00000011716) #26 TAF15 (ENSOGAG00000011719) #27 HEATR9 (ENSOGAG00000011724) #28 ENSOGAG00000011726 #29 CCL16 (ENSOGAG00000033836) #32 CCL14 (ENSOGAG00000027314) #33 ENSOGAG00000001316 #35 ENSOGAG00000012746 ##37 ENSOGAG00000028390 ##37 HEATR6 (ENSOGAG00000008153) HNF1B (ENSOGAG00000000869) DDX52 (ENSOGAG00000000868) SYNRG (ENSOGAG00000000867) Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.c.a ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 Glires ANCESTRAL SPECIES 3 ENSGT01100000263482.A.a.a.c.a ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #37 Rodentia ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #37 Rodentia_A ANCESTRAL SPECIES 3 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT00960000187851 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00550000074863 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.b ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945 Hystricomorpha_a ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.b ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Guinea pig DUPLICATION Guinea pig MODERN SPECIES 32 ENSCPOG00000013468 ##37 CCL7 (ENSCPOG00000013035) ##37 CCL11 (ENSCPOG00000032138) ##37 ENSCPOG00000033402 ##37 TMEM132E (ENSCPOG00000001908) CCT6B (ENSCPOG00000002794) ZNF830 (ENSCPOG00000031218) LIG3 (ENSCPOG00000013032) #7 RFFL (ENSCPOG00000022966) #8 RAD51D (ENSCPOG00000025259) #9 FNDC8 (ENSCPOG00000020325) #10 NLE1 (ENSCPOG00000013116) #11 UNC45B (ENSCPOG00000013117) #12 SLFN5 (ENSCPOG00000011027) #13 PEX12 (ENSCPOG00000039161) #21 ENSCPOG00000010238 #22 RASL10B (ENSCPOG00000031497) #23 ENSCPOG00000036328 C17orf50 (ENSCPOG00000019600) #25 MMP28 (ENSCPOG00000031764) #26 ENSCPOG00000040326 #27 HEATR9 (ENSCPOG00000010117) #28 ENSCPOG00000008852 #29 CCL14 (ENSCPOG00000035450) #33 ENSCPOG00000039417 #35 ENSCPOG00000026400 #37 ENSCPOG00000037138 ##37 ENSCPOG00000033663 ##37 ENSCPOG00000032867 ##37 ENSCPOG00000035230 ENSCPOG00000036860 Guinea pig MODERN SPECIES 163 FAM169A (ENSCPOG00000025740) NSA2 (ENSCPOG00000030702) GFM2 (ENSCPOG00000006332) HEXB (ENSCPOG00000006324) ENSCPOG00000023166 #22 ENC1 (ENSCPOG00000004353) ARHGEF28 (ENSCPOG00000006680) UTP15 (ENSCPOG00000006669) ANKRA2 (ENSCPOG00000006571) ENSCPOG00000012832 ENSCPOG00000035195 TMEM174 (ENSCPOG00000002881) TMEM171 (ENSCPOG00000019983) FCHO2 (ENSCPOG00000005442) TNPO1 (ENSCPOG00000003540) ENSCPOG00000020216 Hystricomorpha_b ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT01100000264661 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.b ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945 ENSGT00520000060616 ENSGT00390000016675 Long-tailed chinchilla MODERN SPECIES 188 ENSCLAG00000005107 ##37 ENSCLAG00000006411 TMEM132E (ENSCLAG00000006946) CCT6B (ENSCLAG00000014724) ZNF830 (ENSCLAG00000017672) LIG3 (ENSCLAG00000009138) #7 RFFL (ENSCLAG00000010681) #8 RAD51D (ENSCLAG00000004975) #9 FNDC8 (ENSCLAG00000006982) #10 NLE1 (ENSCLAG00000008143) #11 UNC45B (ENSCLAG00000013212) #12 ENSCLAG00000008166 #17 ENSCLAG00000017329 #18 SLFN14 (ENSCLAG00000004969) #19 PEX12 (ENSCLAG00000006085) #21 AP2B1 (ENSCLAG00000009660) #22 RASL10B (ENSCLAG00000016447) #23 GAS2L2 (ENSCLAG00000010014) #24 C17orf50 (ENSCLAG00000011018) #25 MMP28 (ENSCLAG00000012449) #26 TAF15 (ENSCLAG00000008940) #27 HEATR9 (ENSCLAG00000010061) #28 ENSCLAG00000015541 #29 ENSCLAG00000014715 ENSCLAG00000007121 #35 ENSCLAG00000007367 ##37 Degu MODERN SPECIES 205 ENSODEG00000013102 SLFN14 (ENSODEG00000012242) #19 ENSODEG00000013257 AP2B1 (ENSODEG00000013913) #22 RASL10B (ENSODEG00000012407) #23 ENSODEG00000012204 C17orf50 (ENSODEG00000012668) #25 MMP28 (ENSODEG00000016303) #26 ENSODEG00000012915 #27 HEATR9 (ENSODEG00000012621) #28 ENSODEG00000012792 #29 ENSODEG00000013298 ENSODEG00000013395 ##37 ENSODEG00000013198 ##37 ENSODEG00000013480 ##37 ENSODEG00000013109 HEATR6 (ENSODEG00000013428) HNF1B (ENSODEG00000012709) ENSODEG00000012382 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 12 ASIC2 (ENSHGLG00000000958) CCL2 (ENSHGLG00000034308) ##37 CCL11 (ENSHGLG00000001015) ##37 ENSHGLG00000001025 ##37 ENSHGLG00000042122 Lig3 (ENSHGLG00000001349) #7 ENSHGLG00000001734 #8 RAD51D (ENSHGLG00000001857) #9 FNDC8 (ENSHGLG00000001963) #10 NLE1 (ENSHGLG00000002006) #11 UNC45B (ENSHGLG00000002117) #12 ENSHGLG00000039133 SLFN14 (ENSHGLG00000002313) #19 ENSHGLG00000019904 PEX12 (ENSHGLG00000044826) #21 AP2B1 (ENSHGLG00000002411) #22 RASL10B (ENSHGLG00000038176) #23 ENSHGLG00000005151 ENSHGLG00000036876 #25 ENSHGLG00000040978 #26 ENSHGLG00000005292 #27 ENSHGLG00000005395 #29 ENSHGLG00000047538 #32 ENSHGLG00000036900 #33 ENSHGLG00000050713 #35 CCL15 (ENSHGLG00000006092) #35 ENSHGLG00000006414 ##37 ENSHGLG00000036724 #37 ENSHGLG00000007508 OMG (ENSHGLG00000038199) EVI2B (ENSHGLG00000043351) Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000033530 ENSHGLG00000002303 ENSHGLG00000002529 SMIM18 (ENSHGLG00000002636) ENSHGLG00000039655 ENSHGLG00000039496 GSR (ENSHGLG00000008420) ENSHGLG00000050810 ENSHGLG00000047725 UBXN8 (ENSHGLG00000037756) PPP2CB (ENSHGLG00000004398) TEX15 (ENSHGLG00000040015) ENSHGLG00000046666 PURG (ENSHGLG00000003706) WRN (ENSHGLG00000003638) ENSHGLG00000003390 #22 NRG1 (ENSHGLG00000004920) FUT10 (ENSHGLG00000003149) ENSHGLG00000004478 MAK16 (ENSHGLG00000002981) TTI2 (ENSHGLG00000002506) RNF122 (ENSHGLG00000035559) DUSP26 (ENSHGLG00000012175) ENSHGLG00000036058 UNC5D (ENSHGLG00000009719) ENSHGLG00000037018 KCNU1 (ENSHGLG00000015824) ENSHGLG00000007555 ZNF703 (ENSHGLG00000010999) ERLIN2 (ENSHGLG00000035041) PROSC (ENSHGLG00000041569) Sciuridae ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.c.a ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 Marmotini ANCESTRAL SPECIES 8 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00390000010003.ab ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00520000060616 Alpin marmot MODERN SPECIES 42 ENSMMMG00000018715 #18 SLFN13 (ENSMMMG00000018719) #17 SLFN14 (ENSMMMG00000018767) #19 PEX12 (ENSMMMG00000018771) #21 AP2B1 (ENSMMMG00000018789) #22 RASL10B (ENSMMMG00000018941) #23 ENSMMMG00000018962 C17orf50 (ENSMMMG00000018963) #25 MMP28 (ENSMMMG00000018988) #26 TAF15 (ENSMMMG00000019003) #27 HEATR9 (ENSMMMG00000019012) #28 ENSMMMG00000019031 #29 CCL16 (ENSMMMG00000019034) #32 CCL14 (ENSMMMG00000019039) #33 ENSMMMG00000019047 #35 ENSMMMG00000019053 ENSMMMG00000019056 ENSMMMG00000019060 #37 ENSMMMG00000019088 ENSMMMG00000019090 #37 Marmotini_b ANCESTRAL SPECIES 5 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT01060000250264 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00390000010003.ab ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00520000060616 Arctic ground squirrel MODERN SPECIES 742 PEX12 (ENSUPAG00010017569) #21 AP2B1 (ENSUPAG00010017425) #22 RASL10B (ENSUPAG00010017401) #23 ENSUPAG00010017391 ENSUPAG00010017381 C17orf50 (ENSUPAG00010017373) #25 MMP28 (ENSUPAG00010017333) #26 TAF15 (ENSUPAG00010017298) #27 HEATR9 (ENSUPAG00010017281) #28 ENSUPAG00010017272 #29 CCL16 (ENSUPAG00010017264) #32 CCL14 (ENSUPAG00010017262) #33 ENSUPAG00010017258 #35 ENSUPAG00010017252 ##37 ENSUPAG00010017172 #37 ENSUPAG00010017167 ENSUPAG00010017158 Squirrel MODERN SPECIES 90 PEX12 (ENSSTOG00000025573) #21 AP2B1 (ENSSTOG00000002031) #22 RASL10B (ENSSTOG00000021097) #23 ENSSTOG00000032802 C17orf50 (ENSSTOG00000029437) #25 MMP28 (ENSSTOG00000020743) #26 TAF15 (ENSSTOG00000002081) #27 HEATR9 (ENSSTOG00000028751) #28 ENSSTOG00000015833 #29 CCL14 (ENSSTOG00000033490) #33 ENSSTOG00000034887 #35 ENSSTOG00000027899 #37 ENSSTOG00000031610 ENSSTOG00000027458 #37 ENSSTOG00000013313 ##37 ENSSTOG00000032858 HEATR6 (ENSSTOG00000026901) Eurasian red squirrel MODERN SPECIES 12 CCT6B (ENSSVLG00005012972) ZNF830 (ENSSVLG00005012926) LIG3 (ENSSVLG00005012872) #7 RFFL (ENSSVLG00005012713) #8 RAD51D (ENSSVLG00005012550) #9 FNDC8 (ENSSVLG00005012462) #10 NLE1 (ENSSVLG00005012107) #11 UNC45B (ENSSVLG00005011413) #12 ENSSVLG00005011336 #13 ENSSVLG00005011301 ENSSVLG00005011281 #13 ENSSVLG00005011264 #13 SLFN13 (ENSSVLG00005011190) #17 SLFN14 (ENSSVLG00005011129) #19 PEX12 (ENSSVLG00005011091) #21 AP2B1 (ENSSVLG00005010470) #22 RASL10B (ENSSVLG00005010407) #23 GAS2L2 (ENSSVLG00005010308) #24 C17orf50 (ENSSVLG00005010248) #25 MMP28 (ENSSVLG00005010157) #26 TAF15 (ENSSVLG00005010110) #27 HEATR9 (ENSSVLG00005009904) #28 ENSSVLG00005009862 #29 CCL16 (ENSSVLG00005009830) #32 CCL14 (ENSSVLG00005009782) #33 ENSSVLG00005009747 #35 ENSSVLG00005009720 ENSSVLG00005009611 #37 ENSSVLG00005009573 #37 ENSSVLG00005009477 ##37 ENSSVLG00005009438 Rodentia_B ANCESTRAL SPECIES 1 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Myomorpha ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Muroidea ANCESTRAL SPECIES ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Cricetidae ANCESTRAL SPECIES ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.e ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Cricetidae_B ANCESTRAL SPECIES ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.e ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Northern American deer mouse MODERN SPECIES 21 Tmem132e (ENSPEMG00000016046) Cct6b (ENSPEMG00000022000) Zfp830 (ENSPEMG00000024107) Lig3 (ENSPEMG00000021826) #7 Rffl (ENSPEMG00000023690) #8 Rad51d (ENSPEMG00000022893) #9 Fndc8 (ENSPEMG00000012327) #10 Nle1 (ENSPEMG00000023993) #11 Unc45b (ENSPEMG00000008983) #12 Slfn5 (ENSPEMG00000021448) #13 Slfn9 (ENSPEMG00000010005) #17 ENSPEMG00000024894 ENSPEMG00000010010 Slfn14 (ENSPEMG00000012902) #19 Pex12 (ENSPEMG00000030925) #21 Ap2b1 (ENSPEMG00000018294) #22 Rasl10b (ENSPEMG00000027697) #23 Gas2l2 (ENSPEMG00000018233) #24 1700020L24Rik (ENSPEMG00000013417) #25 Mmp28 (ENSPEMG00000019080) #26 Taf15 (ENSPEMG00000018715) #27 Heatr9 (ENSPEMG00000009167) #28 Ccl5 (ENSPEMG00000008561) #29 Ccl9 (ENSPEMG00000028232) #35 Ccl6 (ENSPEMG00000008169) #35 Ccl3 (ENSPEMG00000028000) #37 ENSPEMG00000030825 ##37 ENSPEMG00000026681 ENSPEMG00000027305 ##37 ENSPEMG00000025016 ##37 ENSPEMG00000028019 ##37 Prairie vole MODERN SPECIES 15 Tmem132e (ENSMOCG00000017883) Cct6b (ENSMOCG00000015382) Zfp830 (ENSMOCG00000002661) Lig3 (ENSMOCG00000013887) #7 Rffl (ENSMOCG00000005235) #8 Rad51d (ENSMOCG00000019246) #9 Fndc8 (ENSMOCG00000016181) #10 Nle1 (ENSMOCG00000005383) #11 Unc45b (ENSMOCG00000016526) #12 Slfn5 (ENSMOCG00000010517) #13 ENSMOCG00000018543 #17 Slfn2 (ENSMOCG00000021779) #18 Slfn1 (ENSMOCG00000005408) #18 Slfn14 (ENSMOCG00000008378) #19 Pex12 (ENSMOCG00000016233) #21 Ap2b1 (ENSMOCG00000014475) #22 Rasl10b (ENSMOCG00000001964) #23 Gas2l2 (ENSMOCG00000005581) #24 1700020L24Rik (ENSMOCG00000019897) #25 Mmp28 (ENSMOCG00000018460) #26 Taf15 (ENSMOCG00000015121) #27 Heatr9 (ENSMOCG00000009616) #28 Ccl5 (ENSMOCG00000020386) #29 ENSMOCG00000002418 ENSMOCG00000012772 ENSMOCG00000013583 #37 Ccl4 (ENSMOCG00000012149) ##37 ENSMOCG00000013687 ENSMOCG00000016372 Wfdc21 (ENSMOCG00000019007) Heatr6 (ENSMOCG00000015431) Cricetinae ANCESTRAL SPECIES ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00940000165476.d ENSGT00940000165476.c ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.e ENSGT00530000064879.f ENSGT00520000060616 Golden Hamster MODERN SPECIES 684 ENSMAUG00000013646 ##37 Tmem132e (ENSMAUG00000016009) Cct6b (ENSMAUG00000001673) Zfp830 (ENSMAUG00000012194) Lig3 (ENSMAUG00000020082) #7 Rffl (ENSMAUG00000003967) #8 Rad51d (ENSMAUG00000009497) #9 Fndc8 (ENSMAUG00000016080) #10 Nle1 (ENSMAUG00000016623) #11 Unc45b (ENSMAUG00000011322) #12 ENSMAUG00000009126 #13 Slfn9 (ENSMAUG00000013430) #17 Slfn1 (ENSMAUG00000003013) #18 Slfn14 (ENSMAUG00000020439) #19 Pex12 (ENSMAUG00000004768) #21 Ap2b1 (ENSMAUG00000021295) #22 Rasl10b (ENSMAUG00000011536) #23 Gas2l2 (ENSMAUG00000001264) #24 ENSMAUG00000018386 #27 Heatr9 (ENSMAUG00000019408) #28 Ccl5 (ENSMAUG00000000781) #29 ENSMAUG00000021412 ENSMAUG00000015635 Ccl3 (ENSMAUG00000021167) #37 Ccl4 (ENSMAUG00000020742) ##37 ENSMAUG00000009975 Wfdc21 (ENSMAUG00000018673) Heatr6 (ENSMAUG00000009627) Hnf1b (ENSMAUG00000009573) ENSMAUG00000007943 Ddx52 (ENSMAUG00000021084) Chinese hamster chok1gshd MODERN SPECIES 33 Cct6b (ENSCGRG00001020850) Zfp830 (ENSCGRG00001003631) Lig3 (ENSCGRG00001004370) #7 Rffl (ENSCGRG00001019316) #8 Rad51d (ENSCGRG00001012167) #9 Fndc8 (ENSCGRG00001013060) #10 Nle1 (ENSCGRG00001009877) #11 Unc45b (ENSCGRG00001022400) #12 Slfn5 (ENSCGRG00001016905) #13 Slfn9 (ENSCGRG00001021962) #17 Slfn2 (ENSCGRG00001022663) #18 Slfn1 (ENSCGRG00001009249) #18 ENSCGRG00001019431 #18 Slfn14 (ENSCGRG00001017464) #19 Pex12 (ENSCGRG00001019900) #21 Ap2b1 (ENSCGRG00001020053) #22 Rasl10b (ENSCGRG00001010269) #23 Gas2l2 (ENSCGRG00001022937) #24 1700020L24Rik (ENSCGRG00001006404) #25 Mmp28 (ENSCGRG00001013370) #26 Taf15 (ENSCGRG00001012011) #27 Heatr9 (ENSCGRG00001019308) #28 Ccl5 (ENSCGRG00001017129) #29 ENSCGRG00001017750 Ccl6 (ENSCGRG00001008290) #35 Ccl3 (ENSCGRG00001019421) #37 Ccl4 (ENSCGRG00001020791) ##37 ENSCGRG00001018407 ENSCGRG00001019205 Wfdc21 (ENSCGRG00001020449) Heatr6 (ENSCGRG00001000753) Murinae ANCESTRAL SPECIES 6 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mus ANCESTRAL SPECIES 2 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.g ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b.a #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b.b #18 ENSGT00410000025651.A.b.a.a.b.e.b.a #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Mouse MODERN SPECIES 2 Lig3 (ENSMUSG00000020697) #7 Rffl (ENSMUSG00000020696) #8 Rad51d (ENSMUSG00000018841) #9 Fndc8 (ENSMUSG00000018844) #10 Nle1 (ENSMUSG00000020692) #11 Unc45b (ENSMUSG00000018845) #12 Slfn5 (ENSMUSG00000054404) #13 Slfn9 (ENSMUSG00000069793) #17 Slfn8 (ENSMUSG00000035208) #17 Slfn2 (ENSMUSG00000072620) #18 Slfn1 (ENSMUSG00000078763) #18 Slfn4 (ENSMUSG00000000204) #18 Slfn3 (ENSMUSG00000018986) #18 Slfn14 (ENSMUSG00000082101) #19 Pex12 (ENSMUSG00000018733) #21 Ap2b1 (ENSMUSG00000035152) #22 Rasl10b (ENSMUSG00000020684) #23 Gas2l2 (ENSMUSG00000020686) #24 1700020L24Rik (ENSMUSG00000035085) #25 Mmp28 (ENSMUSG00000020682) #26 Taf15 (ENSMUSG00000020680) #27 Heatr9 (ENSMUSG00000018925) #28 Ccl5 (ENSMUSG00000035042) #29 Ccl9 (ENSMUSG00000019122) #35 Ccl6 (ENSMUSG00000018927) #35 Ccl3 (ENSMUSG00000000982) #37 Ccl4 (ENSMUSG00000018930) ##37 Wfdc17 (ENSMUSG00000069792) Wfdc18 (ENSMUSG00000000983) Wfdc21 (ENSMUSG00000051748) Heatr6 (ENSMUSG00000000976) Mus_C ANCESTRAL SPECIES 3 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.a.a.b.e.a #18 ENSGT00410000025651.A.b.a.a.b.f #18 ENSGT00410000025651.A.b.a.a.b.e.b.a #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.m #35 ENSGT01100000263482.C.c.b.a.b.a.n #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.g.c ENSGT00530000064879.h ENSGT00520000060616 ENSGT00390000016675 Steppe mouse MODERN SPECIES 3305 ENSMSIG00000012844 #18 Slfn14 (ENSMSIG00000012821) #19 Pex12 (ENSMSIG00000012790) #21 Ap2b1 (ENSMSIG00000012708) #22 Rasl10b (ENSMSIG00000012687) #23 Gas2l2 (ENSMSIG00000012668) #24 1700020L24Rik (ENSMSIG00000012643) #25 Mmp28 (ENSMSIG00000012526) #26 Taf15 (ENSMSIG00000012461) #27 Heatr9 (ENSMSIG00000012418) #28 Ccl5 (ENSMSIG00000012408) #29 Ccl9 (ENSMSIG00000012396) #35 Ccl6 (ENSMSIG00000012387) #35 Ccl3 (ENSMSIG00000012367) #37 Ccl4 (ENSMSIG00000012352) ##37 ENSMSIG00000012344 ENSMSIG00000012332 ENSMSIG00000012323 Wfdc17 (ENSMSIG00000012316) spretus MODERN SPECIES 2 Lig3 (MGP_SPRETEiJ_G0017700) #7 Rffl (MGP_SPRETEiJ_G0017701) #8 Rad51d (MGP_SPRETEiJ_G0017702) #9 Fndc8 (MGP_SPRETEiJ_G0017703) #10 Nle1 (MGP_SPRETEiJ_G0017704) #11 Unc45b (MGP_SPRETEiJ_G0017705) #12 Slfn5 (MGP_SPRETEiJ_G0017706) #13 MGP_SPRETEiJ_G0017707 #17 MGP_SPRETEiJ_G0017708 #17 Slfn2 (MGP_SPRETEiJ_G0017709) #18 Slfn1 (MGP_SPRETEiJ_G0017710) #18 MGP_SPRETEiJ_G0017711 #18 MGP_SPRETEiJ_G0017712 #18 Slfn14 (MGP_SPRETEiJ_G0017713) #19 Pex12 (MGP_SPRETEiJ_G0017714) #21 Ap2b1 (MGP_SPRETEiJ_G0017715) #22 Rasl10b (MGP_SPRETEiJ_G0017716) #23 Gas2l2 (MGP_SPRETEiJ_G0017717) #24 1700020L24Rik (MGP_SPRETEiJ_G0017718) #25 Mmp28 (MGP_SPRETEiJ_G0017719) #26 Taf15 (MGP_SPRETEiJ_G0017720) #27 Heatr9 (MGP_SPRETEiJ_G0017721) #28 Ccl5 (MGP_SPRETEiJ_G0017722) #29 Ccl9 (MGP_SPRETEiJ_G0017723) #35 Ccl6 (MGP_SPRETEiJ_G0017724) #35 MGP_SPRETEiJ_G0017725 Ccl3 (MGP_SPRETEiJ_G0017726) #37 Ccl4 (MGP_SPRETEiJ_G0017727) ##37 Wfdc17 (MGP_SPRETEiJ_G0017728) Wfdc18 (MGP_SPRETEiJ_G0017729) Wfdc21 (MGP_SPRETEiJ_G0017730) Ryukyu mouse MODERN SPECIES 2 Lig3 (MGP_CAROLIEiJ_G0016856) #7 Rffl (MGP_CAROLIEiJ_G0016857) #8 Rad51d (MGP_CAROLIEiJ_G0016858) #9 Fndc8 (MGP_CAROLIEiJ_G0016859) #10 Nle1 (MGP_CAROLIEiJ_G0016860) #11 Unc45b (MGP_CAROLIEiJ_G0016861) #12 MGP_CAROLIEiJ_G0016862 #13 MGP_CAROLIEiJ_G0016863 #17 MGP_CAROLIEiJ_G0016864 #17 Slfn2 (MGP_CAROLIEiJ_G0016865) #18 Slfn1 (MGP_CAROLIEiJ_G0016866) #18 MGP_CAROLIEiJ_G0016867 #18 MGP_CAROLIEiJ_G0016868 #18 Slfn14 (MGP_CAROLIEiJ_G0016869) #19 Pex12 (MGP_CAROLIEiJ_G0016870) #21 Ap2b1 (MGP_CAROLIEiJ_G0016871) #22 Rasl10b (MGP_CAROLIEiJ_G0016872) #23 Gas2l2 (MGP_CAROLIEiJ_G0016873) #24 1700020L24Rik (MGP_CAROLIEiJ_G0016874) #25 Mmp28 (MGP_CAROLIEiJ_G0016875) #26 Taf15 (MGP_CAROLIEiJ_G0016876) #27 Heatr9 (MGP_CAROLIEiJ_G0016877) #28 Ccl5 (MGP_CAROLIEiJ_G0016878) #29 Ccl9 (MGP_CAROLIEiJ_G0016879) #35 Ccl6 (MGP_CAROLIEiJ_G0016880) #35 Ccl3 (MGP_CAROLIEiJ_G0016881) #37 Ccl4 (MGP_CAROLIEiJ_G0016882) ##37 Wfdc17 (MGP_CAROLIEiJ_G0016883) Wfdc18 (MGP_CAROLIEiJ_G0016884) Wfdc21 (MGP_CAROLIEiJ_G0016885) Heatr6 (MGP_CAROLIEiJ_G0016886) Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0017987 ##37 MGP_PahariEiJ_G0017988 ##37 Ccl1 (MGP_PahariEiJ_G0017989) Tmem132e (MGP_PahariEiJ_G0017990) Cct6b (MGP_PahariEiJ_G0017991) Zfp830 (MGP_PahariEiJ_G0017992) Lig3 (MGP_PahariEiJ_G0017993) #7 Rffl (MGP_PahariEiJ_G0017994) #8 Rad51d (MGP_PahariEiJ_G0017995) #9 Fndc8 (MGP_PahariEiJ_G0017996) #10 Nle1 (MGP_PahariEiJ_G0017997) #11 Unc45b (MGP_PahariEiJ_G0017998) #12 Slfn5 (MGP_PahariEiJ_G0017999) #13 Slfn14 (MGP_PahariEiJ_G0018000) #19 Pex12 (MGP_PahariEiJ_G0018001) #21 Ap2b1 (MGP_PahariEiJ_G0018002) #22 Rasl10b (MGP_PahariEiJ_G0018003) #23 Gas2l2 (MGP_PahariEiJ_G0018004) #24 1700020L24Rik (MGP_PahariEiJ_G0018005) #25 Mmp28 (MGP_PahariEiJ_G0018006) #26 Taf15 (MGP_PahariEiJ_G0018007) #27 Heatr9 (MGP_PahariEiJ_G0018008) #28 Ccl5 (MGP_PahariEiJ_G0018009) #29 Ccl9 (MGP_PahariEiJ_G0018010) #35 Ccl6 (MGP_PahariEiJ_G0018011) #35 Ccl3 (MGP_PahariEiJ_G0018012) #37 Ccl4 (MGP_PahariEiJ_G0018013) ##37 Wfdc21 (MGP_PahariEiJ_G0018015) Heatr6 (MGP_PahariEiJ_G0018016) Hnf1b (MGP_PahariEiJ_G0018017) Ddx52 (MGP_PahariEiJ_G0018018) Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 8 ENSRNOG00000065594 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) Rat MODERN SPECIES 8 Nrsn1 (ENSRNOG00000017444) Dcdc2 (ENSRNOG00000017511) Mrs2 (ENSRNOG00000017545) Gpld1 (ENSRNOG00000017702) Aldh5a1 (ENSRNOG00000023538) RGD1307443 (ENSRNOG00000018141) Rpl37-ps1 (ENSRNOG00000063362) Tdp2 (ENSRNOG00000018246) Acot13 (ENSRNOG00000018415) C17h6orf62-ps1 (ENSRNOG00000018456) Gmnn (ENSRNOG00000018782) Armh2 (ENSRNOG00000064812) Ripor2 (ENSRNOG00000018804) Cmahp (ENSRNOG00000003094) ENSRNOG00000067245 #22 ENSRNOG00000064118 #22 Carmil1 (ENSRNOG00000016576) Scgn (ENSRNOG00000016628) H2ac1 (ENSRNOG00000065352) H2bc1 (ENSRNOG00000069905) Slc17a4 (ENSRNOG00000022505) AABR07027750.1 (ENSRNOG00000042692) Slc17a3 (ENSRNOG00000032745) Slc17a2 (ENSRNOG00000017180) H1f1 (ENSRNOG00000017175) Hist1h3b (ENSRNOG00000068614) Hist1h4m (ENSRNOG00000065263) LOC102549173 (ENSRNOG00000066835) H3c13 (ENSRNOG00000065054) Hist1h2af (ENSRNOG00000022146) H1f2 (ENSRNOG00000067441) Rat DUPLICATION Rat MODERN SPECIES 1 Unc45b (ENSRNOG00000009466) #12 ENSRNOG00000062443 Slfn5 (ENSRNOG00000021719) #13 Slfn13 (ENSRNOG00000021412) #17 ENSRNOG00000063847 LOC108352183 (ENSRNOG00000037114) Slfn2 (ENSRNOG00000037113) #18 Slfn1 (ENSRNOG00000048053) #18 Slfn4 (ENSRNOG00000057092) Slfn4 (ENSRNOG00000063541) #18 LOC688925 (ENSRNOG00000032135) AC118772.2 (ENSRNOG00000021357) #18 ENSRNOG00000062983 #18 AC118772.1 (ENSRNOG00000009709) #19 Pex12 (ENSRNOG00000009718) #21 Ap2b1 (ENSRNOG00000061543) #22 Rasl10b (ENSRNOG00000010302) #23 Gas2l2 (ENSRNOG00000047546) #24 LOC689039 (ENSRNOG00000049757) #25 Mmp28 (ENSRNOG00000047940) #26 Taf15 (ENSRNOG00000058393) #27 Heatr9 (ENSRNOG00000037100) #28 Ccl5 (ENSRNOG00000010906) Ccl9 (ENSRNOG00000028548) #35 Ccl6 (ENSRNOG00000030021) Ccl3 (ENSRNOG00000011205) #37 Ccl4 (ENSRNOG00000011406) ##37 ENSRNOG00000070672 LOC103695128 (ENSRNOG00000051084) LOC100909660 (ENSRNOG00000066869) ENSRNOG00000066744 Rat MODERN SPECIES ENSRNOG00000066169 ENSRNOG00000068667 Zfp273l-ps1 (ENSRNOG00000046353) LOC102551340 (ENSRNOG00000047145) Spry3-ps1 (ENSRNOG00000064505) Zfp748 (ENSRNOG00000069921) LOC102549842 (ENSRNOG00000049259) LOC102547287 (ENSRNOG00000016462) RGD1566325 (ENSRNOG00000017963) ENSRNOG00000068953 Zfp455l1 (ENSRNOG00000042308) Mtrr (ENSRNOG00000017826) Fastkd3 (ENSRNOG00000027422) Cfap90 (ENSRNOG00000047406) Adcy2 (ENSRNOG00000032150) Ap2b1-ps1 (ENSRNOG00000017678) #22 Tent4a (ENSRNOG00000017613) Srd5a1 (ENSRNOG00000017601) Nsun2 (ENSRNOG00000017254) Ube2ql1 (ENSRNOG00000034075) Med10 (ENSRNOG00000017150) Dlat-ps1 (ENSRNOG00000017095) Ice1 (ENSRNOG00000023053) Adamts16 (ENSRNOG00000016812) Irx1 (ENSRNOG00000033609) Irx2 (ENSRNOG00000012742) Irx4 (ENSRNOG00000012720) Ndufs6l1 (ENSRNOG00000062531) Mrpl36 (ENSRNOG00000023407) Lpcat1 (ENSRNOG00000017930) Slc6a3 (ENSRNOG00000017302) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Tmem132e (ENSNGAG00000014402) ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) Zfp830 (ENSNGAG00000014849) Lig3 (ENSNGAG00000019767) #7 Rffl (ENSNGAG00000017708) #8 Rad51d (ENSNGAG00000008118) #9 Fndc8 (ENSNGAG00000019921) #10 Nle1 (ENSNGAG00000012348) #11 Unc45b (ENSNGAG00000000238) #12 Slfn5 (ENSNGAG00000014194) #13 ENSNGAG00000020404 #17 Slfn14 (ENSNGAG00000011735) #19 ENSNGAG00000016398 ENSNGAG00000013242 ENSNGAG00000009444 #22 Rasl10b (ENSNGAG00000002106) #23 ENSNGAG00000019453 1700020L24Rik (ENSNGAG00000019913) #25 Mmp28 (ENSNGAG00000014473) #26 ENSNGAG00000015117 Taf15 (ENSNGAG00000017633) #27 Heatr9 (ENSNGAG00000011711) #28 Ccl5 (ENSNGAG00000003622) #29 ENSNGAG00000006220 Ccl3 (ENSNGAG00000003991) #37 Ccl4 (ENSNGAG00000003228) ##37 ENSNGAG00000017535 Wfdc21 (ENSNGAG00000012983) Heatr6 (ENSNGAG00000016534) Hnf1b (ENSNGAG00000017601) Upper Galilee mountains blind mole rat MODERN SPECIES 1303 Rhou (ENSNGAG00000010199) ENSNGAG00000013788 Rab4a (ENSNGAG00000020318) Ccsap (ENSNGAG00000020516) Acta1 (ENSNGAG00000008844) Nup133 (ENSNGAG00000011857) ENSNGAG00000016124 #22 Abcb10 (ENSNGAG00000005450) Taf5l (ENSNGAG00000013058) Urb2 (ENSNGAG00000016524) ENSNGAG00000000097 Galnt2 (ENSNGAG00000017214) Pgbd5 (ENSNGAG00000016041) ENSNGAG00000013046 Agt (ENSNGAG00000014491) Capn9 (ENSNGAG00000017031) 2310022B05Rik (ENSNGAG00000012261) Ttc13 (ENSNGAG00000013995) Arv1 (ENSNGAG00000007653) Fam89a (ENSNGAG00000015567) Trim67 (ENSNGAG00000000094) 2810004N23Rik (ENSNGAG00000001222) Lesser Egyptian jerboa MODERN SPECIES 112 Tmem132e (ENSJJAG00000018290) Cct6b (ENSJJAG00000014826) Zfp830 (ENSJJAG00000010210) Lig3 (ENSJJAG00000003848) #7 Rffl (ENSJJAG00000020929) #8 Rad51d (ENSJJAG00000014931) #9 Fndc8 (ENSJJAG00000018336) #10 Nle1 (ENSJJAG00000008356) #11 Unc45b (ENSJJAG00000018066) #12 ENSJJAG00000016743 ENSJJAG00000020087 #17 ENSJJAG00000024250 #18 ENSJJAG00000018288 Slfn14 (ENSJJAG00000016028) #19 ENSJJAG00000008010 Ap2b1 (ENSJJAG00000023688) #22 Rasl10b (ENSJJAG00000011469) #23 ENSJJAG00000020015 1700020L24Rik (ENSJJAG00000011369) #25 Mmp28 (ENSJJAG00000009319) #26 Taf15 (ENSJJAG00000010606) #27 Heatr9 (ENSJJAG00000012557) #28 Ccl5 (ENSJJAG00000024069) #29 Ccl3 (ENSJJAG00000022032) #37 Ccl4 (ENSJJAG00000011404) ##37 ENSJJAG00000023138 Wfdc21 (ENSJJAG00000014661) Heatr6 (ENSJJAG00000012154) Hnf1b (ENSJJAG00000011207) Ddx52 (ENSJJAG00000021877) Synrg (ENSJJAG00000021827) Kangaroo rat MODERN SPECIES 338 Cct6b (ENSDORG00000001249) Lig3 (ENSDORG00000013422) #7 Rffl (ENSDORG00000013424) #8 Rad51d (ENSDORG00000024542) #9 Fndc8 (ENSDORG00000000843) #10 Nle1 (ENSDORG00000000845) #11 Unc45b (ENSDORG00000000847) #12 ENSDORG00000023333 #17 Pex12 (ENSDORG00000026935) #21 Ap2b1 (ENSDORG00000003803) #22 Rasl10b (ENSDORG00000003805) #23 ENSDORG00000026155 1700020L24Rik (ENSDORG00000003808) #25 Mmp28 (ENSDORG00000003809) #26 Taf15 (ENSDORG00000014619) #27 ENSDORG00000003141 #28 Ccl5 (ENSDORG00000007688) #29 Ccl4 (ENSDORG00000026295) ##37 Wfdc21 (ENSDORG00000024216) Heatr6 (ENSDORG00000011214) Hnf1b (ENSDORG00000009669) Ddx52 (ENSDORG00000004276) Synrg (ENSDORG00000004275) Dusp14 (ENSDORG00000025341) Tada2a (ENSDORG00000009547) Lagomorpha ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.c.a ##37 ENSGT01100000263482.F ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476.b ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT00940000165089 ENSGT00520000060616 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Rabbit MODERN SPECIES 10 ENSOCUG00000030195 ENSOCUG00000013412 ##37 ENSOCUG00000013416 TMEM132E (ENSOCUG00000012159) CCT6B (ENSOCUG00000012343) ZNF830 (ENSOCUG00000012351) LIG3 (ENSOCUG00000006305) #7 RFFL (ENSOCUG00000006315) #8 ENSOCUG00000014300 #9 FNDC8 (ENSOCUG00000014306) #10 NLE1 (ENSOCUG00000014310) #11 UNC45B (ENSOCUG00000026443) #12 SLFN13 (ENSOCUG00000003504) #17 SLFN14 (ENSOCUG00000006884) #19 PEX12 (ENSOCUG00000004058) #21 AP2B1 (ENSOCUG00000004060) #22 RASL10B (ENSOCUG00000004080) #23 GAS2L2 (ENSOCUG00000004081) #24 C17orf50 (ENSOCUG00000004084) #25 MMP28 (ENSOCUG00000004089) #26 TAF15 (ENSOCUG00000002838) #27 HEATR9 (ENSOCUG00000002842) #28 ENSOCUG00000002848 #29 CCL14 (ENSOCUG00000002849) #33 ENSOCUG00000000686 ENSOCUG00000000771 #37 ENSOCUG00000026206 ENSOCUG00000036945 HEATR6 (ENSOCUG00000003690) HNF1B (ENSOCUG00000003682) DDX52 (ENSOCUG00000014532) Pika MODERN SPECIES 3093 ENSOPRG00000011707 LIG3 (ENSOPRG00000011746) #7 RFFL (ENSOPRG00000011769) #8 RAD51D (ENSOPRG00000011777) #9 FNDC8 (ENSOPRG00000011794) #10 NLE1 (ENSOPRG00000011799) #11 UNC45B (ENSOPRG00000011826) #12 ENSOPRG00000011856 #17 PEX12 (ENSOPRG00000011876) #21 AP2B1 (ENSOPRG00000011887) #22 RASL10B (ENSOPRG00000011920) #23 ENSOPRG00000011930 C17orf50 (ENSOPRG00000011951) #25 MMP28 (ENSOPRG00000011967) #26 HEATR9 (ENSOPRG00000011985) #28 ENSOPRG00000012010 #29 ENSOPRG00000012019 #32 CCL14 (ENSOPRG00000018376) #33 ENSOPRG00000012033 ENSOPRG00000012047 ENSOPRG00000012051 Tree shrew MODERN SPECIES 2667 AP2B1 (ENSTBEG00000005943) #22 ENSTBEG00000007338 #23 GAS2L2 (ENSTBEG00000007765) #24 C17orf50 (ENSTBEG00000008260) #25 MMP28 (ENSTBEG00000008806) #26 TAF15 (ENSTBEG00000009064) #27 ENSTBEG00000001717 #28 ENSTBEG00000002353 #29 ENSTBEG00000002787 #35 Laurasiatheria ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 Eulipotyphla ANCESTRAL SPECIES 114 ENSGT00410000025651.A.b.b #19 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 Hedgehog MODERN SPECIES 6778 AP2B1 (ENSEEUG00000008571) #22 RASL10B (ENSEEUG00000008876) #23 GAS2L2 (ENSEEUG00000008890) #24 ENSEEUG00000009107 #25 MMP28 (ENSEEUG00000009150) #26 Common shrew MODERN SPECIES 6415 ENSSARG00000011880 #19 AP2B1 (ENSSARG00000011885) #22 Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00940000154991.b ENSGT00390000003008 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01050000245362 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 Chiroptera ANCESTRAL SPECIES 2 ENSGT00940000154991.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Microchiroptera ANCESTRAL SPECIES ENSGT00940000154991.b ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Microbat DUPLICATION Microbat MODERN SPECIES 1324 CCT6B (ENSMLUG00000012459) ZNF830 (ENSMLUG00000012466) LIG3 (ENSMLUG00000012470) #7 RFFL (ENSMLUG00000012490) #8 RAD51D (ENSMLUG00000012495) #9 FNDC8 (ENSMLUG00000012504) #10 NLE1 (ENSMLUG00000012506) #11 UNC45B (ENSMLUG00000012519) #12 ENSMLUG00000029329 #13 ENSMLUG00000017543 #17 SLFN14 (ENSMLUG00000002831) #19 PEX12 (ENSMLUG00000002834) #21 ENSMLUG00000002837 #22 RASL10B (ENSMLUG00000002848) #23 GAS2L2 (ENSMLUG00000015013) #24 C17orf50 (ENSMLUG00000002867) #25 MMP28 (ENSMLUG00000002856) #26 TAF15 (ENSMLUG00000002870) #27 HEATR9 (ENSMLUG00000002879) #28 ENSMLUG00000002891 #29 CCL16 (ENSMLUG00000004832) #32 ENSMLUG00000028764 ##37 ENSMLUG00000002895 #37 ENSMLUG00000002898 ##37 ENSMLUG00000025038 ENSMLUG00000025164 ENSMLUG00000025097 ENSMLUG00000027241 Microbat MODERN SPECIES 715 ENSMLUG00000028723 #22 Greater horseshoe bat MODERN SPECIES 13 ENSRFEG00010019773 CCL2 (ENSRFEG00010019809) ##37 CCL8 (ENSRFEG00010019872) ##37 TMEM132E (ENSRFEG00010019902) CCT6B (ENSRFEG00010020082) ZNF830 (ENSRFEG00010020329) LIG3 (ENSRFEG00010020352) #7 RFFL (ENSRFEG00010020407) #8 RAD51D (ENSRFEG00010020450) #9 FNDC8 (ENSRFEG00010020501) #10 NLE1 (ENSRFEG00010020540) #11 UNC45B (ENSRFEG00010020648) #12 ENSRFEG00010020802 #17 SLFN14 (ENSRFEG00010020815) #19 PEX12 (ENSRFEG00010020841) #21 AP2B1 (ENSRFEG00010020872) #22 RASL10B (ENSRFEG00010020930) #23 GAS2L2 (ENSRFEG00010020946) #24 C17orf50 (ENSRFEG00010020982) #25 MMP28 (ENSRFEG00010021011) #26 TAF15 (ENSRFEG00010021040) #27 HEATR9 (ENSRFEG00010021087) #28 ENSRFEG00010021148 #29 CCL16 (ENSRFEG00010021167) #32 CCL14 (ENSRFEG00010021174) #33 ENSRFEG00010021181 #35 ENSRFEG00010005380 ENSRFEG00010005430 ##37 ENSRFEG00010005457 ENSRFEG00010005494 ##37 ENSRFEG00010005514 ##37 Megabat MODERN SPECIES 2816 RAD51D (ENSPVAG00000003905) #9 ENSPVAG00000003917 #10 NLE1 (ENSPVAG00000003920) #11 UNC45B (ENSPVAG00000003925) #12 ENSPVAG00000003934 #17 PEX12 (ENSPVAG00000003936) #21 AP2B1 (ENSPVAG00000003940) #22 RASL10B (ENSPVAG00000003944) #23 GAS2L2 (ENSPVAG00000003947) #24 C17orf50 (ENSPVAG00000003950) #25 MMP28 (ENSPVAG00000003951) #26 TAF15 (ENSPVAG00000003952) #27 Equus ANCESTRAL SPECIES ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a.b #17 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01050000245362 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000166945.d Donkey MODERN SPECIES 4 TMEM132E (ENSEASG00005010955) CCT6B (ENSEASG00005010982) ZNF830 (ENSEASG00005011187) LIG3 (ENSEASG00005011191) #7 RFFL (ENSEASG00005011194) #8 RAD51D (ENSEASG00005011196) #9 FNDC8 (ENSEASG00005011197) #10 NLE1 (ENSEASG00005011199) #11 UNC45B (ENSEASG00005011201) #12 SLFN5 (ENSEASG00005011202) #13 ENSEASG00005036238 #17 ENSEASG00005011206 #18 ENSEASG00005011205 #17 SLFN14 (ENSEASG00005011210) #19 PEX12 (ENSEASG00005035401) #21 AP2B1 (ENSEASG00005011219) #22 RASL10B (ENSEASG00005011223) #23 GAS2L2 (ENSEASG00005011225) #24 C17orf50 (ENSEASG00005028802) #25 MMP28 (ENSEASG00005011229) #26 TAF15 (ENSEASG00005011235) #27 HEATR9 (ENSEASG00005011246) #28 ENSEASG00005031059 #29 ENSEASG00005025972 #32 ENSEASG00005031361 #33 ENSEASG00005011251 ENSEASG00005011253 ##37 ENSEASG00005011254 ENSEASG00005035439 ##37 ENSEASG00005011256 ENSEASG00005011258 Horse MODERN SPECIES 2 TMEM132E (ENSECAG00000023816) ZNF830 (ENSECAG00000003872) CCT6B (ENSECAG00000021342) LIG3 (ENSECAG00000016416) #7 RFFL (ENSECAG00000015502) #8 RAD51D (ENSECAG00000014139) #9 FNDC8 (ENSECAG00000014023) #10 NLE1 (ENSECAG00000011072) #11 UNC45B (ENSECAG00000001034) #12 SLFN5 (ENSECAG00000017186) #13 ENSECAG00000047377 #17 ENSECAG00000060188 ENSECAG00000017158 #18 ENSECAG00000039393 #17 PEX12 (ENSECAG00000015368) #21 AP2B1 (ENSECAG00000009033) #22 RASL10B (ENSECAG00000008089) #23 GAS2L2 (ENSECAG00000007690) #24 C11H17orf50 (ENSECAG00000007503) #25 MMP28 (ENSECAG00000004234) #26 TAF15 (ENSECAG00000000718) #27 HEATR9 (ENSECAG00000024894) #28 ENSECAG00000030869 #32 ENSECAG00000024882 ENSECAG00000024886 #33 ENSECAG00000024790 ##37 ENSECAG00000024640 ##37 ENSECAG00000022992 ##37 ENSECAG00000037915 ENSECAG00000056927 ENSECAG00000029928 Carnivora ANCESTRAL SPECIES 9 ENSGT01100000263482.F ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Caniformia ANCESTRAL SPECIES 6 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Caniformia_b ANCESTRAL SPECIES 21 ENSGT01030000234760 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Ursidae ANCESTRAL SPECIES 18 ENSGT01030000234760 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000165089 Ursus ANCESTRAL SPECIES 8 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000161793.y.b ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Polar bear MODERN SPECIES 192 CCL13 (ENSUMAG00000015615) ##37 ENSUMAG00000015623 CCT6B (ENSUMAG00000015641) ZNF830 (ENSUMAG00000015731) LIG3 (ENSUMAG00000015895) #7 RFFL (ENSUMAG00000016713) #8 RAD51D (ENSUMAG00000016723) #9 FNDC8 (ENSUMAG00000016726) #10 NLE1 (ENSUMAG00000016727) #11 UNC45B (ENSUMAG00000016733) #12 ENSUMAG00000016792 #13 ENSUMAG00000016794 #13 ENSUMAG00000016797 #18 SLFN14 (ENSUMAG00000016804) #19 PEX12 (ENSUMAG00000016839) #21 AP2B1 (ENSUMAG00000016846) #22 GAS2L2 (ENSUMAG00000016854) #24 TAF15 (ENSUMAG00000016876) #27 HEATR9 (ENSUMAG00000016881) #28 ENSUMAG00000016895 #29 ENSUMAG00000016900 #33 ENSUMAG00000016907 ##37 ENSUMAG00000016911 ENSUMAG00000016915 ENSUMAG00000016920 #35 ENSUMAG00000016926 ##37 ENSUMAG00000016930 #37 ENSUMAG00000016931 ##37 ENSUMAG00000016935 ENSUMAG00000016939 ENSUMAG00000016943 American black bear MODERN SPECIES 3296 SLFN14 (ENSUAMG00000008919) #19 PEX12 (ENSUAMG00000008910) #21 ENSUAMG00000008903 #22 Giant Panda MODERN SPECIES 4 CCL13 (ENSAMEG00000023685) ##37 CCL1 (ENSAMEG00000005795) ##37 TMEM132E (ENSAMEG00000014409) CCT6B (ENSAMEG00000014473) ZNF830 (ENSAMEG00000019495) LIG3 (ENSAMEG00000014509) #7 RFFL (ENSAMEG00000014564) #8 RAD51D (ENSAMEG00000014577) #9 FNDC8 (ENSAMEG00000014606) #10 NLE1 (ENSAMEG00000014614) #11 UNC45B (ENSAMEG00000014637) #12 SLFN5 (ENSAMEG00000014706) #13 ENSAMEG00000014720 #18 SLFN14 (ENSAMEG00000014725) #19 PEX12 (ENSAMEG00000014739) #21 AP2B1 (ENSAMEG00000014745) #22 GAS2L2 (ENSAMEG00000014830) #24 RASL10B (ENSAMEG00000014822) #23 C17orf50 (ENSAMEG00000027935) #25 MMP28 (ENSAMEG00000014834) #26 ENSAMEG00000014860 #27 ENSAMEG00000014896 #28 CCL5 (ENSAMEG00000029436) #29 ENSAMEG00000014904 #32 ENSAMEG00000027516 #33 ENSAMEG00000029251 #35 ENSAMEG00000030600 ##37 ENSAMEG00000011334 #37 ENSAMEG00000023646 ##37 ENSAMEG00000011328 ENSAMEG00000028046 Mustelinae ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01100000263482.F ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492.c #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 American mink MODERN SPECIES 37 ENSNVIG00000019653 CCL8 (ENSNVIG00000019665) ##37 CCL13 (ENSNVIG00000019676) ##37 CCL1 (ENSNVIG00000019684) ##37 TMEM132E (ENSNVIG00000019694) CCT6B (ENSNVIG00000019712) ZNF830 (ENSNVIG00000019817) LIG3 (ENSNVIG00000019831) #7 RFFL (ENSNVIG00000019960) #8 RAD51D (ENSNVIG00000020004) #9 FNDC8 (ENSNVIG00000020043) #10 NLE1 (ENSNVIG00000020060) #11 UNC45B (ENSNVIG00000020104) #12 SLFN14 (ENSNVIG00000020175) #19 PEX12 (ENSNVIG00000020190) #21 ENSNVIG00000020204 #22 RSLAB (ENSNVIG00000020253) #23 GAS2L2 (ENSNVIG00000020273) #24 C17orf50 (ENSNVIG00000020299) #25 MMP28 (ENSNVIG00000020319) #26 TAF15 (ENSNVIG00000020344) #27 HEATR9 (ENSNVIG00000020408) #28 CCL5 (ENSNVIG00000020449) #29 CCL16 (ENSNVIG00000020466) #32 CCL14 (ENSNVIG00000020482) #33 ENSNVIG00000020490 ##37 ENSNVIG00000020505 #37 CL3L1 (ENSNVIG00000020511) ##37 CCL4 (ENSNVIG00000020522) ##37 ENSNVIG00000020540 ENSNVIG00000020548 Ferret MODERN SPECIES 181 ENSMPUG00000014849 TMEM132E (ENSMPUG00000014852) ENSMPUG00000014853 CCT6B (ENSMPUG00000014856) ZNF830 (ENSMPUG00000019518) ENSMPUG00000019522 ENSMPUG00000014859 #7 RFFL (ENSMPUG00000014861) #8 ENSMPUG00000014877 RAD51D (ENSMPUG00000014878) #9 FNDC8 (ENSMPUG00000014880) #10 NLE1 (ENSMPUG00000014893) #11 UNC45B (ENSMPUG00000014896) #12 SLFN14 (ENSMPUG00000014899) #19 PEX12 (ENSMPUG00000014908) #21 AP2B1 (ENSMPUG00000014910) #22 RASL10B (ENSMPUG00000014916) #23 GAS2L2 (ENSMPUG00000014920) #24 MMP28 (ENSMPUG00000014927) #26 TAF15 (ENSMPUG00000014948) #27 HEATR9 (ENSMPUG00000014952) #28 ENSMPUG00000014962 #29 ENSMPUG00000014978 #33 ENSMPUG00000014967 #37 ENSMPUG00000014979 #35 ENSMPUG00000014983 ##37 ENSMPUG00000014985 ##37 ENSMPUG00000014994 ##37 ENSMPUG00000014996 ENSMPUG00000014998 HEATR6 (ENSMPUG00000015001) Canidae ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Canis_lupus ANCESTRAL SPECIES 3 ENSGT01100000263482.F ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00980000203160 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Dog MODERN SPECIES 37 TMEM132E (ENSCAFG00845011068) ENSCAFG00845011012 CCT6B (ENSCAFG00845010909) ZNF830 (ENSCAFG00845010855) LIG3 (ENSCAFG00845010737) #7 RFFL (ENSCAFG00845010579) #9 FNDC8 (ENSCAFG00845010495) #10 RFFL (ENSCAFG00845010302) #11 UNC45B (ENSCAFG00845010061) #12 ENSCAFG00845010008 #13 ENSCAFG00845009985 ENSCAFG00845009945 SLFN14 (ENSCAFG00845009886) #19 ENSCAFG00845009840 PEX12 (ENSCAFG00845009799) #21 AP2B1 (ENSCAFG00845009662) #22 RASL10B (ENSCAFG00845009585) #23 GAS2L2 (ENSCAFG00845009497) #24 C17orf50 (ENSCAFG00845009445) #25 MMP28 (ENSCAFG00845009411) #26 TAF15 (ENSCAFG00845009243) #27 HEATR9 (ENSCAFG00845009131) #28 CCL5 (ENSCAFG00845009083) #29 ENSCAFG00845009059 #32 ENSCAFG00845009033 #33 CCL23 (ENSCAFG00845009019) #35 ENSCAFG00845008998 ##37 CCL3 (ENSCAFG00845008966) ##37 CCL4 (ENSCAFG00845008857) ENSCAFG00845008789 ENSCAFG00845008744 Dingo MODERN SPECIES 150 ENSCAFG00020014164 ENSCAFG00020014162 CCT6B (ENSCAFG00020014065) ZNF830 (ENSCAFG00020014057) LIG3 (ENSCAFG00020014031) #7 RFFL (ENSCAFG00020014028) #8 ENSCAFG00020014019 #9 FNDC8 (ENSCAFG00020014010) #10 NLE1 (ENSCAFG00020014001) #11 UNC45B (ENSCAFG00020013977) #12 ENSCAFG00020013972 #13 ENSCAFG00020013969 ENSCAFG00020013962 SLFN14 (ENSCAFG00020013927) #19 PEX12 (ENSCAFG00020013920) #21 AP2B1 (ENSCAFG00020004407) #22 RASL10B (ENSCAFG00020004082) #23 ENSCAFG00020004079 #24 ENSCAFG00020004077 C17orf50 (ENSCAFG00020004064) #25 MMP28 (ENSCAFG00020004053) #26 TAF15 (ENSCAFG00020004027) #27 HEATR9 (ENSCAFG00020003982) #28 ENSCAFG00020003980 #29 ENSCAFG00020003978 ##37 ENSCAFG00020003957 #37 ENSCAFG00020003951 ##37 ENSCAFG00020003948 ##37 ENSCAFG00020003943 ENSCAFG00020003940 ENSCAFG00020003906 Red fox MODERN SPECIES 20 CCL2 (ENSVVUG00000020543) ##37 CCL8 (ENSVVUG00000020542) ##37 ENSVVUG00000020541 ##37 CCL1 (ENSVVUG00000020540) ##37 TMEM132E (ENSVVUG00000020524) CCT6B (ENSVVUG00000020499) ZNF830 (ENSVVUG00000020495) LIG3 (ENSVVUG00000020483) #7 RFFL (ENSVVUG00000020476) #8 RAD51D (ENSVVUG00000020463) #9 FNDC8 (ENSVVUG00000020460) #10 NLE1 (ENSVVUG00000020437) #11 UNC45B (ENSVVUG00000020428) #12 SLFN14 (ENSVVUG00000020422) #19 PEX12 (ENSVVUG00000020416) #21 AP2B1 (ENSVVUG00000020403) #22 RASL10B (ENSVVUG00000020398) #23 GAS2L2 (ENSVVUG00000020397) #24 ENSVVUG00000020395 C17orf50 (ENSVVUG00000020393) #25 MMP28 (ENSVVUG00000020380) #26 TAF15 (ENSVVUG00000020375) #27 HEATR9 (ENSVVUG00000020369) #28 CCL5 (ENSVVUG00000020367) #29 ENSVVUG00000020365 #32 CCL14 (ENSVVUG00000020364) #33 ENSVVUG00000020363 #35 ENSVVUG00000020362 ##37 ENSVVUG00000020361 #37 ENSVVUG00000020359 ##37 ENSVVUG00000020356 Felidae ANCESTRAL SPECIES 8 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479.i ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Panthera ANCESTRAL SPECIES 14 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479.i ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 Panthera_a ANCESTRAL SPECIES 13 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479.i ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879 ENSGT00520000060616 lion MODERN SPECIES 85 SLFN5 (ENSPLOG00000021889) #13 ENSPLOG00000021864 #19 PEX12 (ENSPLOG00000021845) #21 AP2B1 (ENSPLOG00000021780) #22 RASL10B (ENSPLOG00000021750) #23 GAS2L2 (ENSPLOG00000021698) #24 C17orf50 (ENSPLOG00000021666) #25 MMP28 (ENSPLOG00000021621) #26 TAF15 (ENSPLOG00000021569) #27 HEATR9 (ENSPLOG00000021497) #28 ENSPLOG00000021473 #29 CCL16 (ENSPLOG00000021453) #32 CCL14 (ENSPLOG00000021383) #33 ENSPLOG00000021366 ENSPLOG00000021352 #35 ENSPLOG00000021342 #37 ENSPLOG00000021333 ##37 ENSPLOG00000021237 ##37 ENSPLOG00000021222 leopard MODERN SPECIES 96 ENSPPRG00000009828 CCL8 (ENSPPRG00000009741) ##37 CCL13 (ENSPPRG00000009433) ##37 ENSPPRG00000008979 TMEM132E (ENSPPRG00000008656) CCT6B (ENSPPRG00000007926) ZNF830 (ENSPPRG00000017044) LIG3 (ENSPPRG00000005157) #7 RFFL (ENSPPRG00000003045) #8 RAD51D (ENSPPRG00000001417) #9 FNDC8 (ENSPPRG00000000094) #10 NLE1 (ENSPPRG00000022096) #11 UNC45B (ENSPPRG00000014849) #12 SLFN5 (ENSPPRG00000010973) #13 PEX12 (ENSPPRG00000008251) #21 AP2B1 (ENSPPRG00000007979) #22 RASL10B (ENSPPRG00000006126) #23 ENSPPRG00000005858 C17orf50 (ENSPPRG00000005525) #25 MMP28 (ENSPPRG00000004296) #26 TAF15 (ENSPPRG00000003286) #27 HEATR9 (ENSPPRG00000001679) #28 ENSPPRG00000022842 #29 CCL16 (ENSPPRG00000023127) #32 CCL14 (ENSPPRG00000023216) #33 ENSPPRG00000022503 #37 ENSPPRG00000020856 ##37 ENSPPRG00000019368 ##37 ENSPPRG00000017586 HEATR6 (ENSPPRG00000016046) HNF1B (ENSPPRG00000012674) Tiger MODERN SPECIES 518 ENSPTIG00000019894 CCL8 (ENSPTIG00000019874) ##37 CCL13 (ENSPTIG00000019853) ##37 ENSPTIG00000019795 TMEM132E (ENSPTIG00000019584) CCT6B (ENSPTIG00000019230) ZNF830 (ENSPTIG00000009775) LIG3 (ENSPTIG00000019055) #7 RFFL (ENSPTIG00000018905) #8 RAD51D (ENSPTIG00000018745) #9 FNDC8 (ENSPTIG00000018278) #10 NLE1 (ENSPTIG00000018083) #11 UNC45B (ENSPTIG00000017835) #12 SLFN5 (ENSPTIG00000017726) #13 PEX12 (ENSPTIG00000017661) #21 AP2B1 (ENSPTIG00000017111) #22 RASL10B (ENSPTIG00000016870) #23 GAS2L2 (ENSPTIG00000016863) #24 ENSPTIG00000016834 MMP28 (ENSPTIG00000016715) #26 TAF15 (ENSPTIG00000016445) #27 HEATR9 (ENSPTIG00000016190) #28 ENSPTIG00000015882 #29 CCL16 (ENSPTIG00000015804) #32 CCL14 (ENSPTIG00000015670) #33 ENSPTIG00000015585 #37 ENSPTIG00000015557 ##37 ENSPTIG00000015300 ##37 ENSPTIG00000015144 HEATR6 (ENSPTIG00000014733) HNF1B (ENSPTIG00000014140) Cat MODERN SPECIES 245 CCL2 (ENSFCAG00000038488) ##37 CCL7 (ENSFCAG00000045217) ##37 CCL8 (ENSFCAG00000013594) ##37 CCL13 (ENSFCAG00000026454) ##37 ENSFCAG00000032743 TMEM132E (ENSFCAG00000022991) CCT6B (ENSFCAG00000022789) LIG3 (ENSFCAG00000000249) #7 RFFL (ENSFCAG00000000250) #8 RAD51D (ENSFCAG00000027426) #9 FNDC8 (ENSFCAG00000000252) #10 NLE1 (ENSFCAG00000000253) #11 UNC45B (ENSFCAG00000000254) #12 SLFN5 (ENSFCAG00000000255) #13 PEX12 (ENSFCAG00000010389) #21 AP2B1 (ENSFCAG00000010390) #22 RASL10B (ENSFCAG00000032700) #23 GAS2L2 (ENSFCAG00000033656) #24 CE1H17orf50 (ENSFCAG00000033141) #25 MMP28 (ENSFCAG00000010393) #26 TAF15 (ENSFCAG00000018167) #27 HEATR9 (ENSFCAG00000002003) #28 CCL5 (ENSFCAG00000001259) #29 CCL16 (ENSFCAG00000010005) #32 CCL14 (ENSFCAG00000018482) #33 ENSFCAG00000025629 ENSFCAG00000047484 ##37 ENSFCAG00000032130 #37 ENSFCAG00000033951 ##37 ENSFCAG00000039402 ##37 ENSFCAG00000053621 Artiodactyla ANCESTRAL SPECIES 4 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b ##22 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000155206.d #22 Cetacea ANCESTRAL SPECIES 5 ENSGT01030000234760 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01050000245362 ENSGT00990000211580 Odontoceti ANCESTRAL SPECIES 17 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00990000211580 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 Odontoceti_a ANCESTRAL SPECIES 31 ENSGT01050000244976.b.b.b.a.a.a.a.b ENSGT00510000049558 ENSGT00940000160598.r ENSGT00390000016209.e #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000165089 Dolphin MODERN SPECIES 3362 ENSTTRG00000015663 ENSTTRG00000015665 #21 AP2B1 (ENSTTRG00000015666) #22 Odontoceti_b ANCESTRAL SPECIES 24 ENSGT00390000016209.e #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000165089 Vaquita MODERN SPECIES 12 NME1 (ENSPSNG00000021355) ENSPSNG00000021325 MBTD1 (ENSPSNG00000021287) UTP18 (ENSPSNG00000021239) ENSPSNG00000021217 ENSPSNG00000021206 ENSPSNG00000020878 ENSPSNG00000020758 ENSPSNG00000020693 ##37 ENSPSNG00000020657 ##37 ENSPSNG00000020639 ENSPSNG00000020619 ENSPSNG00000020551 ENSPSNG00000020497 ENSPSNG00000020484 #21 ENSPSNG00000020434 #22 RASL10B (ENSPSNG00000020374) #23 GAS2L2 (ENSPSNG00000020294) #24 C17orf50 (ENSPSNG00000020251) #25 MMP28 (ENSPSNG00000020218) #26 TAF15 (ENSPSNG00000020196) #27 HEATR9 (ENSPSNG00000019966) #28 ENSPSNG00000019862 #29 ENSPSNG00000019836 CCL14 (ENSPSNG00000019802) #33 ENSPSNG00000019744 ##37 ENSPSNG00000019708 ##37 ENSPSNG00000019631 ENSPSNG00000019594 ENSPSNG00000019574 HEATR6 (ENSPSNG00000019450) Monodontidae ANCESTRAL SPECIES 29 ENSGT00390000003855.b.d ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT00940000165089 ENSGT01100000266523 Narwhal MODERN SPECIES 316 ANKRD40 (ENSMMNG00015020484) LUC7L3 (ENSMMNG00015020441) ENSMMNG00015020406 WFIKKN2 (ENSMMNG00015020389) TOB1 (ENSMMNG00015020379) SPAG9 (ENSMMNG00015020158) ENSMMNG00015020040 ENSMMNG00015020026 NME1 (ENSMMNG00015019993) MBTD1 (ENSMMNG00015019943) UTP18 (ENSMMNG00015019839) ENSMMNG00015019539 ENSMMNG00015019311 ##37 ENSMMNG00015019174 ENSMMNG00015019123 AP2B1 (ENSMMNG00015018876) #22 RASL10B (ENSMMNG00015018782) #23 GAS2L2 (ENSMMNG00015018720) #24 C17orf50 (ENSMMNG00015018683) #25 MMP28 (ENSMMNG00015018658) #26 TAF15 (ENSMMNG00015018630) #27 HEATR9 (ENSMMNG00015018520) #28 ENSMMNG00015018499 #29 CCL16 (ENSMMNG00015018475) #32 CCL14 (ENSMMNG00015018458) #33 ENSMMNG00015018444 ##37 ENSMMNG00015018427 HEATR6 (ENSMMNG00015018324) HNF1B (ENSMMNG00015018254) ENSMMNG00015018218 DDX52 (ENSMMNG00015018180) Sperm whale MODERN SPECIES 5 CCL1 (ENSPCTG00005012728) TMEM132E (ENSPCTG00005012754) ENSPCTG00005012970 ENSPCTG00005013032 ENSPCTG00005013042 LIG3 (ENSPCTG00005013330) #7 RFFL (ENSPCTG00005013449) #8 ENSPCTG00005013530 ENSPCTG00005013587 #9 ENSPCTG00005013754 SLFN12 (ENSPCTG00005013784) #18 SLFN11 (ENSPCTG00005013804) #17 SLFN14 (ENSPCTG00005013867) #19 ENSPCTG00005013925 PEX12 (ENSPCTG00005013981) #21 AP2B1 (ENSPCTG00005014049) #22 RASL10B (ENSPCTG00005014172) #23 GAS2L2 (ENSPCTG00005014226) #24 ENSPCTG00005014431 C17orf50 (ENSPCTG00005014470) #25 MMP28 (ENSPCTG00005014601) #26 TAF15 (ENSPCTG00005014729) #27 HEATR9 (ENSPCTG00005014946) #28 CCL5 (ENSPCTG00005015361) #29 CCL16 (ENSPCTG00005015413) #32 CCL14 (ENSPCTG00005015445) #33 ENSPCTG00005015545 ENSPCTG00005015628 #37 ENSPCTG00005015800 ##37 ENSPCTG00005015862 ENSPCTG00005016070 Blue whale MODERN SPECIES 12 CCL1 (ENSBMSG00010015132) ##37 TMEM132E (ENSBMSG00010015019) ENSBMSG00010014985 ZNF830 (ENSBMSG00010014976) LIG3 (ENSBMSG00010014942) #7 RFFL (ENSBMSG00010014852) #8 RAD51D (ENSBMSG00010014782) #9 FNDC8 (ENSBMSG00010014750) #10 NLE1 (ENSBMSG00010014584) #11 UNC45B (ENSBMSG00010014269) #12 ENSBMSG00010014205 #18 ENSBMSG00010014181 #17 SLFN14 (ENSBMSG00010014153) #19 PEX12 (ENSBMSG00010014124) #21 ENSBMSG00010014086 AP2B1 (ENSBMSG00010014021) #22 RASL10B (ENSBMSG00010013977) #23 GAS2L2 (ENSBMSG00010013934) #24 C17orf50 (ENSBMSG00010013900) #25 MMP28 (ENSBMSG00010013863) #26 TAF15 (ENSBMSG00010013832) #27 HEATR9 (ENSBMSG00010013798) #28 ENSBMSG00010021647 #29 ENSBMSG00010021643 CCL16 (ENSBMSG00010021638) #32 CCL14 (ENSBMSG00010021633) #33 ENSBMSG00010021627 ENSBMSG00010021624 ##37 ENSBMSG00010021620 ENSBMSG00010021619 ##37 ENSBMSG00010021612 Camelidae ANCESTRAL SPECIES 66 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01050000245362 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a ##37 ENSGT00940000165089 ENSGT00530000064879.a.b ENSGT00940000168945 Arabian camel MODERN SPECIES 7 CTNS (ENSCDRG00005014378) SHPK (ENSCDRG00005014332) TRPV1 (ENSCDRG00005013770) TRPV3 (ENSCDRG00005013190) ENSCDRG00005013140 ENSCDRG00005013098 OR1P1 (ENSCDRG00005013048) ENSCDRG00005013036 ENSCDRG00005013012 ENSCDRG00005012958 SPATA22 (ENSCDRG00005012628) ENSCDRG00005012592 ENSCDRG00005012545 #17 SLFN14 (ENSCDRG00005012497) #19 PEX12 (ENSCDRG00005012460) #21 AP2B1 (ENSCDRG00005012171) #22 RASL10B (ENSCDRG00005012132) #23 GAS2L2 (ENSCDRG00005012002) #24 MMP28 (ENSCDRG00005011722) #26 TAF15 (ENSCDRG00005011616) #27 HEATR9 (ENSCDRG00005011390) #28 ENSCDRG00005011357 #29 CCL16 (ENSCDRG00005011301) #32 CCL14 (ENSCDRG00005011268) #33 ENSCDRG00005011237 ##37 ENSCDRG00005011190 ENSCDRG00005011149 #37 ENSCDRG00005011025 ENSCDRG00005010997 ENSCDRG00005010366 ENSCDRG00005010283 Alpaca MODERN SPECIES 1445 AP2B1 (ENSVPAG00000005106) #22 Suina ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.d.a.a.b ##37 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00990000211580 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT00940000165089 ENSGT00940000166945 Chacoan peccary MODERN SPECIES 144 CCL11 (ENSCWAG00000015240) ##37 CCL8 (ENSCWAG00000015268) ##37 ENSCWAG00000015299 TMEM132E (ENSCWAG00000015350) CCT6B (ENSCWAG00000015565) ZNF830 (ENSCWAG00000015919) LIG3 (ENSCWAG00000015948) #7 RFFL (ENSCWAG00000016017) #8 RAD51D (ENSCWAG00000016105) #9 FNDC8 (ENSCWAG00000016272) #10 NLE1 (ENSCWAG00000006273) #11 UNC45B (ENSCWAG00000006444) #12 ENSCWAG00000006739 #17 SLFN14 (ENSCWAG00000006953) #19 PEX12 (ENSCWAG00000007111) #21 AP2B1 (ENSCWAG00000007160) #22 RASL10B (ENSCWAG00000007260) #23 GAS2L2 (ENSCWAG00000007285) #24 C17orf50 (ENSCWAG00000007362) #25 MMP28 (ENSCWAG00000007423) #26 TAF15 (ENSCWAG00000007501) #27 HEATR9 (ENSCWAG00000007560) #28 ENSCWAG00000007687 #29 ENSCWAG00000007710 #33 ENSCWAG00000007741 ENSCWAG00000007820 #37 ENSCWAG00000007883 ##37 ENSCWAG00000007931 ENSCWAG00000008047 ENSCWAG00000008066 HEATR6 (ENSCWAG00000008120) Pig MODERN SPECIES 3 CCL11 (ENSSSCG00000044762) ##37 CCL8 (ENSSSCG00000040648) ##37 CCL1 (ENSSSCG00000017720) TMEM132E (ENSSSCG00000022987) CCT6B (ENSSSCG00000022196) ZNF830 (ENSSSCG00000056119) LIG3 (ENSSSCG00000024770) #7 RFFL (ENSSSCG00000032552) #8 RAD51D (ENSSSCG00000061966) #9 FNDC8 (ENSSSCG00000021617) #10 NLE1 (ENSSSCG00000025796) #11 UNC45B (ENSSSCG00000017717) #12 ENSSSCG00000032652 #17 SLFN14 (ENSSSCG00000031114) #19 PEX12 (ENSSSCG00000017713) #21 AP2B1 (ENSSSCG00000017712) #22 RASL10B (ENSSSCG00000036746) #23 GAS2L2 (ENSSSCG00000039395) #24 MMP28 (ENSSSCG00000034440) #26 TAF15 (ENSSSCG00000017707) #27 HEATR9 (ENSSSCG00000017706) #28 CCL5 (ENSSSCG00000017705) #29 CCL16 (ENSSSCG00000040940) #32 CCL14 (ENSSSCG00000034722) #33 ENSSSCG00000033457 #35 ENSSSCG00000041204 ENSSSCG00000047189 #37 CCL3L1 (ENSSSCG00000017700) ##37 CCL4 (ENSSSCG00000032343) ENSSSCG00000039685 ENSSSCG00000031292 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Glires ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Naked mole-rat female MODERN SPECIES 22 ACVR1C (ENSHGLG00000007777) CYTIP (ENSHGLG00000049755) ERMN (ENSHGLG00000044020) GALNT5 (ENSHGLG00000040944) ENSHGLG00000025302 ENSHGLG00000035939 ENSHGLG00000004553 ENSHGLG00000004699 ENSHGLG00000005496 ENSHGLG00000032785 ENSHGLG00000043622 ENSHGLG00000048169 ENSHGLG00000041709 GALNT13 (ENSHGLG00000008663) RPRM (ENSHGLG00000020667) ENSHGLG00000034456 ##22 ENSHGLG00000041977 ENSHGLG00000041758 ARL6IP6 (ENSHGLG00000047268) ENSHGLG00000036357 ENSHGLG00000047580 ENSHGLG00000037717 ENSHGLG00000049887 ENSHGLG00000005180 ENSHGLG00000014840 ENSHGLG00000015684 FAM168B (ENSHGLG00000049252) ENSHGLG00000032060 ENSHGLG00000012881 AMER3 (ENSHGLG00000034065) ENSHGLG00000046018 Sciuridae ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Eurasian red squirrel MODERN SPECIES 13 RFXAP (ENSSVLG00005009115) ENSSVLG00005009129 SERTM1 (ENSSVLG00005009166) CCNA1 (ENSSVLG00005009186) SPART (ENSSVLG00005009224) CCDC169 (ENSSVLG00005009253) SOHLH2 (ENSSVLG00005009335) DCLK1 (ENSSVLG00005009476) NBEA (ENSSVLG00005010027) MAB21L1 (ENSSVLG00005012010) ENSSVLG00005012035 ENSSVLG00005012094 STARD13 (ENSSVLG00005012412) KL (ENSSVLG00005012761) ENSSVLG00005012836 ENSSVLG00005012874 ##22 PDS5B (ENSSVLG00005012920) ENSSVLG00005013108 N4BP2L1 (ENSSVLG00005013256) BRCA2 (ENSSVLG00005015076) ZAR1L (ENSSVLG00005019599) FRY (ENSSVLG00005019945) ENSSVLG00005020793 RXFP2 (ENSSVLG00005020815) B3GLCT (ENSSVLG00005021156) HSPH1 (ENSSVLG00005021367) ENSSVLG00005021904 TEX26 (ENSSVLG00005022083) MEDAG (ENSSVLG00005022152) ALOX5AP (ENSSVLG00005022177) USPL1 (ENSSVLG00005022232) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Chiroptera ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Microbat MODERN SPECIES 1004 ENSMLUG00000028467 ENSMLUG00000029987 ENSMLUG00000022381 ENSMLUG00000029258 ENSMLUG00000024617 ALCAM (ENSMLUG00000007645) CBLB (ENSMLUG00000002004) ENSMLUG00000025183 ENSMLUG00000027517 CCDC54 (ENSMLUG00000028896) ENSMLUG00000025105 ##22 BBX (ENSMLUG00000007351) ENSMLUG00000026897 ENSMLUG00000022406 CD47 (ENSMLUG00000010929) IFT57 (ENSMLUG00000010962) MYH15 (ENSMLUG00000004102) CIP2A (ENSMLUG00000003352) DZIP3 (ENSMLUG00000003356) RETNLB (ENSMLUG00000001459) ENSMLUG00000001461 ENSMLUG00000026283 GUCA1C (ENSMLUG00000009043) MORC1 (ENSMLUG00000009058) Carnivora ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 American mink MODERN SPECIES 289 RAPGEF2 (ENSNVIG00000011224) C4orf45 (ENSNVIG00000011329) FNIP2 (ENSNVIG00000011354) ENSNVIG00000011431 ETFDH (ENSNVIG00000011451) C4orf46 (ENSNVIG00000011495) RXFP1 (ENSNVIG00000011519) ENSNVIG00000011688 ##22 TM144 (ENSNVIG00000011698) ENSNVIG00000011732 GASK1B (ENSNVIG00000011753) Ursidae ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Ursus ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 American black bear MODERN SPECIES 7089 ENSUAMG00000024164 ##22 EBNA1BP2 (ENSUAMG00000024165) Artiodactyla ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Cetacea ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Odontoceti_a ANCESTRAL SPECIES 18 ENSGT01030000234760 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209.f #21 ENSGT00940000155206.c.a ##22 Odontoceti_b ANCESTRAL SPECIES 20 ENSGT01030000234760 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT01010000228931 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209.f #21 ENSGT00940000155206.c.a ##22 Vaquita MODERN SPECIES 12 ZNF830 (ENSPSNG00000011195) LIG3 (ENSPSNG00000011102) #7 RFFL (ENSPSNG00000010922) #8 RAD51D (ENSPSNG00000010752) #9 FNDC8 (ENSPSNG00000010677) #10 NLE1 (ENSPSNG00000010570) #11 UNC45B (ENSPSNG00000010204) #12 ENSPSNG00000010100 #18 ENSPSNG00000010053 #18 SLFN14 (ENSPSNG00000009991) #19 ENSPSNG00000009938 #21 ENSPSNG00000009891 ENSPSNG00000009744 ENSPSNG00000009692 ENSPSNG00000009606 #21 ENSPSNG00000009585 ##22 ENSPSNG00000022370 ENSPSNG00000022368 ##37 ENSPSNG00000022365 ##37 ENSPSNG00000022355 CCL2 (ENSPSNG00000022350) ##37 ASIC2 (ENSPSNG00000022343) SPACA3 (ENSPSNG00000022329) TMEM98 (ENSPSNG00000022321) MYO1D (ENSPSNG00000022301) PSMD11 (ENSPSNG00000022276) ZNF207 (ENSPSNG00000022235) C17orf75 (ENSPSNG00000022179) RHBDL3 (ENSPSNG00000022156) RHOT1 (ENSPSNG00000022092) ADAP2 (ENSPSNG00000022035) Pecora ANCESTRAL SPECIES ENSGT00940000155206.c.a ##22 Percora_a ANCESTRAL SPECIES 21 ENSGT00880000138028.b.b ENSGT00940000155695 ENSGT00900000143654 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT01010000228077 ENSGT00940000153295.b ENSGT00940000155839 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155206.c.a ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a ENSGT00950000183001.a.b.a Siberian musk deer MODERN SPECIES 57 RTN4IP1 (ENSMMSG00000009752) CRYBG1 (ENSMMSG00000009812) ATG5 (ENSMMSG00000009989) PRDM1 (ENSMMSG00000010156) PREP (ENSMMSG00000010324) POPDC3 (ENSMMSG00000010364) BVES (ENSMMSG00000010405) ENSMMSG00000010511 LIN28B (ENSMMSG00000010589) HACE1 (ENSMMSG00000010633) ENSMMSG00000010683 ENSMMSG00000010701 GRIK2 (ENSMMSG00000010751) ASCC3 (ENSMMSG00000011234) SIM1 (ENSMMSG00000011342) ENSMMSG00000011367 ##22 MCHR2 (ENSMMSG00000011392) PRDM13 (ENSMMSG00000011437) ENSMMSG00000011452 ENSMMSG00000011528 ENSMMSG00000012283 ENSMMSG00000012312 PNISR (ENSMMSG00000012362) COQ3 (ENSMMSG00000012403) FAXC (ENSMMSG00000012455) FBXL4 (ENSMMSG00000012478) POU3F2 (ENSMMSG00000012495) ENSMMSG00000012510 MMS22L (ENSMMSG00000012530) KLHL32 (ENSMMSG00000012591) ENSMMSG00000013052 Bovidae ANCESTRAL SPECIES 21 ENSGT00880000138028.b.b ENSGT00940000155695 ENSGT00900000143654 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT01010000228077 ENSGT00940000153295.b ENSGT00940000155839 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155206.c.a ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a Caprinae ANCESTRAL SPECIES 33 ENSGT00550000074866.c ENSGT00880000138028.b.b ENSGT00940000155695 ENSGT00900000143654 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT01010000228077 ENSGT00940000153295.b ENSGT00940000155839 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155206.c.a ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625.c ENSGT00940000164932 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a Goat MODERN SPECIES 28 ATG5 (ENSCHIG00000019684) PRDM1 (ENSCHIG00000023368) PREP (ENSCHIG00000019257) POPDC3 (ENSCHIG00000016800) BVES (ENSCHIG00000008491) LIN28B (ENSCHIG00000011133) ENSCHIG00000015439 HACE1 (ENSCHIG00000025754) ENSCHIG00000025858 ENSCHIG00000009503 ENSCHIG00000018302 ENSCHIG00000015656 GRIK2 (ENSCHIG00000021980) ASCC3 (ENSCHIG00000023605) SIM1 (ENSCHIG00000010900) ENSCHIG00000009763 ##22 MCHR2 (ENSCHIG00000014417) PRDM13 (ENSCHIG00000006628) ENSCHIG00000020922 ENSCHIG00000016858 ENSCHIG00000013830 USP45 (ENSCHIG00000013909) PNISR (ENSCHIG00000017747) COQ3 (ENSCHIG00000011202) ENSCHIG00000010184 FBXL4 (ENSCHIG00000016349) POU3F2 (ENSCHIG00000008214) MMS22L (ENSCHIG00000019370) KLHL32 (ENSCHIG00000011484) ENSCHIG00000019756 GPR63 (ENSCHIG00000007995) Rambouillet Sheep MODERN SPECIES 24 POPDC3 (ENSOARG00020014545) BVES (ENSOARG00020014598) ENSOARG00020014675 LIN28B (ENSOARG00020003103) HACE1 (ENSOARG00020003313) ENSOARG00020004367 ENSOARG00020004377 ENSOARG00020004386 ENSOARG00020004427 ENSOARG00020004455 ENSOARG00020004479 ENSOARG00020004536 GRIK2 (ENSOARG00020004644) ASCC3 (ENSOARG00020006093) SIM1 (ENSOARG00020006280) ENSOARG00020006360 ##22 MCHR2 (ENSOARG00020006398) PRDM13 (ENSOARG00020006456) ENSOARG00020006550 CCNC (ENSOARG00020006653) TSTD3 (ENSOARG00020006801) USP45 (ENSOARG00020006844) PNISR (ENSOARG00020007109) COQ3 (ENSOARG00020007243) FAXC (ENSOARG00020007328) FBXL4 (ENSOARG00020007441) POU3F2 (ENSOARG00020007533) MMS22L (ENSOARG00020007563) KLHL32 (ENSOARG00020007827) ENSOARG00020008188 GPR63 (ENSOARG00020008232) Bovinae ANCESTRAL SPECIES 31 ENSGT00950000186448 ENSGT00960000190646 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT00940000153295.b ENSGT00940000155839 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.a ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a ENSGT00950000183001.a.b.a American bison MODERN SPECIES 2973 ASCC3 (ENSBBBG00000019537) SIM1 (ENSBBBG00000019562) ENSBBBG00000005306 ENSBBBG00000005309 ##22 MCHR2 (ENSBBBG00000005313) ENSBBBG00000019599 PRDM13 (ENSBBBG00000019612) ENSBBBG00000007045 ENSBBBG00000019737 TSTD3 (ENSBBBG00000008950) USP45 (ENSBBBG00000007013) PNISR (ENSBBBG00000019913) COQ3 (ENSBBBG00000005393) FAXC (ENSBBBG00000019944) FBXL4 (ENSBBBG00000019956) ENSBBBG00000005119 ENSBBBG00000019962 MMS22L (ENSBBBG00000020025) KLHL32 (ENSBBBG00000005436) Boreoeutheria ANCESTRAL SPECIES ENSGT00940000155206.c.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000155206.c.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000155206.c.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000155206.c.b ##22 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b ##22 ENSGT00940000155206.d #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.b.a.b #37 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 Pecora DUPLICATION Pecora ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Yarkand deer MODERN SPECIES 28 CCL2 (ENSCHYG00000004987) ##37 CCL11 (ENSCHYG00000004959) ##37 ENSCHYG00000004663 ##37 ENSCHYG00000004652 TMEM132E (ENSCHYG00000004615) CCT6B (ENSCHYG00000004528) ZNF830 (ENSCHYG00000004488) LIG3 (ENSCHYG00000004420) #7 ENSCHYG00000004295 #9 FNDC8 (ENSCHYG00000004217) #10 NLE1 (ENSCHYG00000004131) #11 UNC45B (ENSCHYG00000004023) #12 ENSCHYG00000003986 #18 SLFN14 (ENSCHYG00000003977) #19 PEX12 (ENSCHYG00000003961) #21 ENSCHYG00000003898 ##22 RASL10B (ENSCHYG00000003865) #23 GAS2L2 (ENSCHYG00000003847) #24 C17orf50 (ENSCHYG00000003832) #25 MMP28 (ENSCHYG00000003809) #26 TAF15 (ENSCHYG00000003703) #27 HEATR9 (ENSCHYG00000003637) #28 ENSCHYG00000003613 #29 CCL16 (ENSCHYG00000003598) #32 CCL14 (ENSCHYG00000003585) #33 ENSCHYG00000003559 ENSCHYG00000003542 ##37 ENSCHYG00000003533 #37 ENSCHYG00000003522 ##37 ENSCHYG00000003511 ##37 ENSCHYG00000003496 Percora_a ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Bovidae ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Bovinae ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Bos ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b.n #37 ENSGT00990000211580 Bos_a ANCESTRAL SPECIES ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT00390000004871.a ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b.m.a #37 Wild yak MODERN SPECIES 1117 ENSBMUG00000013512 ##37 CCL1 (ENSBMUG00000013488) ##37 TMEM132E (ENSBMUG00000013479) CCT6B (ENSBMUG00000013437) ZNF830 (ENSBMUG00000013328) LIG3 (ENSBMUG00000013309) #7 RFFL (ENSBMUG00000013239) #8 RAD51D (ENSBMUG00000013181) #9 FNDC8 (ENSBMUG00000013103) #10 NLE1 (ENSBMUG00000013085) #11 UNC45B (ENSBMUG00000013040) #12 ENSBMUG00000012916 #18 ENSBMUG00000012900 #17 SLFN14 (ENSBMUG00000012865) #19 PEX12 (ENSBMUG00000012839) #21 ENSBMUG00000012814 ##22 RASL10B (ENSBMUG00000012740) #23 ENSBMUG00000012734 #24 ENSBMUG00000012720 C17orf50 (ENSBMUG00000012713) #25 ENSBMUG00000012696 MMP28 (ENSBMUG00000012687) #26 TAF15 (ENSBMUG00000012646) #27 HEATR9 (ENSBMUG00000012616) #28 ENSBMUG00000012590 #29 ENSBMUG00000012580 CCL16 (ENSBMUG00000012569) #32 CCL14 (ENSBMUG00000012564) #33 ENSBMUG00000012558 ENSBMUG00000012547 ##37 ENSBMUG00000012533 ##37 Domestic yak MODERN SPECIES 10 ENSBGRG00000020373 ##37 ENSBGRG00000020420 TMEM132E (ENSBGRG00000020451) CCT6B (ENSBGRG00000020692) ZNF830 (ENSBGRG00000021136) LIG3 (ENSBGRG00000021180) #7 RFFL (ENSBGRG00000021399) #8 ENSBGRG00000021490 #9 FNDC8 (ENSBGRG00000021652) #10 NLE1 (ENSBGRG00000021708) #11 UNC45B (ENSBGRG00000022051) #12 ENSBGRG00000022720 #18 ENSBGRG00000022760 #17 SLFN14 (ENSBGRG00000022772) #19 PEX12 (ENSBGRG00000022808) #21 ENSBGRG00000022860 ##22 RASL10B (ENSBGRG00000023043) #23 GAS2L2 (ENSBGRG00000023089) #24 C17orf50 (ENSBGRG00000023233) #25 MMP28 (ENSBGRG00000023311) #26 ENSBGRG00000023398 HEATR9 (ENSBGRG00000023535) #28 ENSBGRG00000023713 #29 ENSBGRG00000023731 CCL16 (ENSBGRG00000023749) #32 CCL14 (ENSBGRG00000023792) #33 ENSBGRG00000023865 ##37 ENSBGRG00000023893 ENSBGRG00000024021 #37 ENSBGRG00000010840 ##37 ENSBGRG00000010946 ##37 Bos_b ANCESTRAL SPECIES 38 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.b #18 ENSGT01100000263480.a.b.a.b.b.b.b.a.a ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT00940000165476 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.b.a.b.m.b #37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b.n #37 ENSGT01100000263482.C.c.b.b.a.a ##37 Cow MODERN SPECIES 10 CCL1 (ENSBTAG00000008832) TMEM132E (ENSBTAG00000002680) CCT6B (ENSBTAG00000020338) ZNF830 (ENSBTAG00000020340) LIG3 (ENSBTAG00000018689) #7 RFFL (ENSBTAG00000013645) #8 RAD51D (ENSBTAG00000019082) #9 FNDC8 (ENSBTAG00000019092) #10 NLE1 (ENSBTAG00000019094) #11 UNC45B (ENSBTAG00000002898) #12 ENSBTAG00000025219 #18 ENSBTAG00000051396 ENSBTAG00000019437 #17 SLFN14 (ENSBTAG00000039206) #19 PEX12 (ENSBTAG00000019723) #21 AP2B1 (ENSBTAG00000020316) ##22 RASL10B (ENSBTAG00000018518) #23 GAS2L2 (ENSBTAG00000018519) #24 C19H17orf50 (ENSBTAG00000045621) #25 MMP28 (ENSBTAG00000006086) #26 TAF15 (ENSBTAG00000006916) HEATR9 (ENSBTAG00000002850) #28 CCL5 (ENSBTAG00000053649) #29 CCL16 (ENSBTAG00000053578) #32 CCL14 (ENSBTAG00000010738) #33 ENSBTAG00000048980 ENSBTAG00000010155 ##37 ENSBTAG00000048626 ##37 ENSBTAG00000003289 #37 ENSBTAG00000051377 CCL4 (ENSBTAG00000025257) ##37 Hybrid Bos Indicus MODERN SPECIES 10 ENSBIXG00005003275 TMEM132E (ENSBIXG00005003295) CCT6B (ENSBIXG00005020356) ZNF830 (ENSBIXG00005000019) LIG3 (ENSBIXG00005020425) #7 RFFL (ENSBIXG00005020511) #8 RAD51D (ENSBIXG00005007727) #9 FNDC8 (ENSBIXG00005020624) #10 NLE1 (ENSBIXG00005020696) #11 UNC45B (ENSBIXG00005020949) #12 ENSBIXG00005003547 #18 ENSBIXG00005021013 ENSBIXG00005021034 #17 SLFN14 (ENSBIXG00005021050) #19 PEX12 (ENSBIXG00005021083) #21 ENSBIXG00005021182 ##22 RASL10B (ENSBIXG00005021225) #23 GAS2L2 (ENSBIXG00005021333) #24 C17orf50 (ENSBIXG00005007305) #25 MMP28 (ENSBIXG00005021408) #26 TAF15 (ENSBIXG00005021454) #27 HEATR9 (ENSBIXG00005007371) #28 ENSBIXG00005021593 #29 CCL16 (ENSBIXG00005021613) #32 ENSBIXG00005021642 #33 ENSBIXG00005003651 ENSBIXG00005021684 ##37 ENSBIXG00005021705 #37 ENSBIXG00005021738 ##37 ENSBIXG00005021752 ENSBIXG00005021800 ##37 American bison MODERN SPECIES 3331 CCL11 (ENSBBBG00000015529) ##37 ENSBBBG00000015515 ##37 TMEM132E (ENSBBBG00000003856) CCT6B (ENSBBBG00000015432) ZNF830 (ENSBBBG00000003814) LIG3 (ENSBBBG00000003485) #7 RFFL (ENSBBBG00000001330) #8 RAD51D (ENSBBBG00000015308) #9 FNDC8 (ENSBBBG00000015233) #10 NLE1 (ENSBBBG00000003521) #11 UNC45B (ENSBBBG00000003753) #12 ENSBBBG00000000800 #18 ENSBBBG00000015007 #17 SLFN14 (ENSBBBG00000003718) #19 PEX12 (ENSBBBG00000014984) #21 ENSBBBG00000014960 ##22 RASL10B (ENSBBBG00000000919) #23 GAS2L2 (ENSBBBG00000000929) #24 MMP28 (ENSBBBG00000000966) #26 TAF15 (ENSBBBG00000000998) #27 HEATR9 (ENSBBBG00000001077) #28 ENSBBBG00000001120 #29 CCL16 (ENSBBBG00000001142) #32 CCL14 (ENSBBBG00000001153) #33 ENSBBBG00000001168 ENSBBBG00000001180 ##37 ENSBBBG00000001231 ##37 ENSBBBG00000003679 ##37 ENSBBBG00000014876 ENSBBBG00000014865 ENSBBBG00000003664 Caprinae ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.d.a.a.b ##37 ENSGT01100000263482.A.a.a.d.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095.c.a #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206.c.b.a ##22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.B #32 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.a.b ##37 ENSGT01100000263482.C.c.b.a.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b.k #37 ENSGT01100000263482.C.c.b.b.a.a ##37 ENSGT01100000263482.C.c.a ##37 ENSGT00530000064879.a.a.a Goat MODERN SPECIES 10 CCL11 (ENSCHIG00000012968) ##37 CCL8 (ENSCHIG00000020074) ##37 ENSCHIG00000002408 TMEM132E (ENSCHIG00000015468) CCT6B (ENSCHIG00000023739) ZNF830 (ENSCHIG00000012740) LIG3 (ENSCHIG00000023884) #7 RFFL (ENSCHIG00000012667) #8 ENSCHIG00000019605 #9 FNDC8 (ENSCHIG00000027164) #10 NLE1 (ENSCHIG00000012536) #11 UNC45B (ENSCHIG00000018294) #12 ENSCHIG00000026701 #17 SLFN14 (ENSCHIG00000026874) #19 PEX12 (ENSCHIG00000025650) #21 ENSCHIG00000019283 ##22 RASL10B (ENSCHIG00000018183) #23 GAS2L2 (ENSCHIG00000026688) #24 C17orf50 (ENSCHIG00000018412) #25 MMP28 (ENSCHIG00000027070) #26 ENSCHIG00000027235 #27 HEATR9 (ENSCHIG00000021394) #28 ENSCHIG00000016688 #29 ENSCHIG00000004359 CCL14 (ENSCHIG00000015200) #33 ENSCHIG00000021417 ##37 ENSCHIG00000003747 #37 ENSCHIG00000017081 ##37 ENSCHIG00000026450 ##37 ENSCHIG00000014748 #37 ENSCHIG00000017931 Rambouillet Sheep MODERN SPECIES 2 CCL1 (ENSOARG00020017691) ##37 TMEM132E (ENSOARG00020017730) CCT6B (ENSOARG00020018028) ZNF830 (ENSOARG00020018540) LIG3 (ENSOARG00020018561) #7 RFFL (ENSOARG00020018710) #8 ENSOARG00020018814 #9 FNDC8 (ENSOARG00020018903) #10 ENSOARG00020018949 #11 ENSOARG00020018986 #11 UNC45B (ENSOARG00020019061) #12 ENSOARG00020019677 ENSOARG00020019723 #18 SLFN14 (ENSOARG00020019977) #19 PEX12 (ENSOARG00020020025) #21 AP2B1 (ENSOARG00020020066) ##22 ENSOARG00020020386 RASL10B (ENSOARG00020020400) #23 C17orf50 (ENSOARG00020020706) #25 MMP28 (ENSOARG00020020795) #26 TAF15 (ENSOARG00020020914) #27 HEATR9 (ENSOARG00020021381) #28 ENSOARG00020021566 #29 CCL16 (ENSOARG00020021594) #32 CCL14 (ENSOARG00020021620) #33 ENSOARG00020021658 ##37 ENSOARG00020021698 ##37 ENSOARG00020021729 #37 ENSOARG00020021765 ##37 ENSOARG00020021814 ##37 ENSOARG00020021888 Siberian musk deer MODERN SPECIES 1135 CCL1 (ENSMMSG00000013764) ##37 ENSMMSG00000013748 TMEM132E (ENSMMSG00000013674) CCT6B (ENSMMSG00000013474) ZNF830 (ENSMMSG00000013439) LIG3 (ENSMMSG00000013344) #7 RFFL (ENSMMSG00000013303) #8 ENSMMSG00000013244 #9 FNDC8 (ENSMMSG00000013206) #10 NLE1 (ENSMMSG00000013105) #11 UNC45B (ENSMMSG00000012816) #12 ENSMMSG00000012754 #18 ENSMMSG00000012719 #17 SLFN14 (ENSMMSG00000012689) #19 PEX12 (ENSMMSG00000012661) #21 ENSMMSG00000012554 ##22 RASL10B (ENSMMSG00000012523) #23 GAS2L2 (ENSMMSG00000012477) #24 C17orf50 (ENSMMSG00000012439) #25 MMP28 (ENSMMSG00000012400) #26 TAF15 (ENSMMSG00000012333) #27 HEATR9 (ENSMMSG00000012236) #28 ENSMMSG00000012217 #29 ENSMMSG00000012206 #32 ENSMMSG00000012185 #33 ENSMMSG00000012172 ENSMMSG00000012162 ##37 ENSMMSG00000012140 ENSMMSG00000012133 ##37 ENSMMSG00000012107 ##37 ENSMMSG00000012084 Pecora ANCESTRAL SPECIES ENSGT00940000155206.c.b.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00940000155206.c.b.b ##22 Bovidae ANCESTRAL SPECIES ENSGT00940000155206.c.b.b ##22 Bovinae ANCESTRAL SPECIES ENSGT00940000155206.c.b.b ##22 Bos ANCESTRAL SPECIES 19 ENSGT00940000155695 ENSGT00950000186448 ENSGT00960000190646 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT00940000153295.b ENSGT00940000155839 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.b.b ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164601.e ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a ENSGT00950000183001.a.b.a Bos_a ANCESTRAL SPECIES 18 ENSGT00880000138028.b.b ENSGT00940000155695 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT00940000153295.b ENSGT00940000155839 ENSGT00940000155610 ENSGT00950000183010.a.b.a.a.a.a.a.b.b.i.b ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.b.b ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a ENSGT00950000183001.a.b.a Domestic yak MODERN SPECIES 1 ENSBGRG00000005152 ENSBGRG00000005146 ENSBGRG00000005140 PREP (ENSBGRG00000005031) POPDC3 (ENSBGRG00000005006) BVES (ENSBGRG00000004850) LIN28B (ENSBGRG00000004803) ENSBGRG00000004777 HACE1 (ENSBGRG00000004127) ENSBGRG00000004076 ENSBGRG00000004053 GRIK2 (ENSBGRG00000003805) ASCC3 (ENSBGRG00000003723) SIM1 (ENSBGRG00000003658) ENSBGRG00000003627 ENSBGRG00000003604 ##22 ENSBGRG00000003594 ENSBGRG00000003580 PRDM13 (ENSBGRG00000026581) ENSBGRG00000026578 ENSBGRG00000026554 TSTD3 (ENSBGRG00000026535) USP45 (ENSBGRG00000026528) PNISR (ENSBGRG00000026524) COQ3 (ENSBGRG00000026518) FAXC (ENSBGRG00000026514) FBXL4 (ENSBGRG00000026508) POU3F2 (ENSBGRG00000026502) ENSBGRG00000026495 MMS22L (ENSBGRG00000026462) KLHL32 (ENSBGRG00000026432) Wild yak MODERN SPECIES 1440 ASCC3 (ENSBMUG00000025567) SIM1 (ENSBMUG00000025561) ENSBMUG00000025556 ENSBMUG00000025553 ##22 MCHR2 (ENSBMUG00000025547) PRDM13 (ENSBMUG00000025544) ENSBMUG00000025541 ENSBMUG00000025528 TSTD3 (ENSBMUG00000025494) USP45 (ENSBMUG00000025490) PNISR (ENSBMUG00000025486) COQ3 (ENSBMUG00000025485) FAXC (ENSBMUG00000025484) FBXL4 (ENSBMUG00000025478) ENSBMUG00000025474 Bos_b ANCESTRAL SPECIES 24 ENSGT00880000138028.b.b ENSGT00940000155695 ENSGT00390000004766 ENSGT00940000154798.a.d.a ENSGT00530000063426.b.b ENSGT00390000002563.b.a.a ENSGT00390000002563.a ENSGT00940000153295.b ENSGT00940000155839 ENSGT01100000263481.n.a.a.a.a.a.b.b.b ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.b.b ##22 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164601.e ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627.a ENSGT00950000183001.a.b.a Cow MODERN SPECIES 28 CRYBG1 (ENSBTAG00000017527) ENSBTAG00000052057 ATG5 (ENSBTAG00000005400) PRDM1 (ENSBTAG00000000816) PREP (ENSBTAG00000016281) POPDC3 (ENSBTAG00000046017) BVES (ENSBTAG00000018790) LIN28B (ENSBTAG00000043973) HACE1 (ENSBTAG00000001533) ENSBTAG00000051738 ENSBTAG00000053858 GRIK2 (ENSBTAG00000033153) ASCC3 (ENSBTAG00000020482) SIM1 (ENSBTAG00000002294) ENSBTAG00000014104 ENSBTAG00000052778 ##22 MCHR2 (ENSBTAG00000005449) PRDM13 (ENSBTAG00000006095) ENSBTAG00000054078 CCNC (ENSBTAG00000015744) USP45 (ENSBTAG00000018528) TSTD3 (ENSBTAG00000038931) PNISR (ENSBTAG00000019730) COQ3 (ENSBTAG00000019729) FAXC (ENSBTAG00000044061) FBXL4 (ENSBTAG00000005729) POU3F2 (ENSBTAG00000024773) MMS22L (ENSBTAG00000000629) KLHL32 (ENSBTAG00000005301) NDUFAF4 (ENSBTAG00000003174) GPR63 (ENSBTAG00000002915) Hybrid Bos Indicus MODERN SPECIES 28 ENSBIXG00005029830 ENSBIXG00005029840 PREP (ENSBIXG00005029865) POPDC3 (ENSBIXG00005029917) BVES (ENSBIXG00005029927) ENSBIXG00005029941 LIN28B (ENSBIXG00005029958) HACE1 (ENSBIXG00005030042) ENSBIXG00005030149 ENSBIXG00005030156 ENSBIXG00005030182 GRIK2 (ENSBIXG00005030262) ASCC3 (ENSBIXG00005030349) SIM1 (ENSBIXG00005030367) ENSBIXG00005030383 ENSBIXG00005030391 ##22 MCHR2 (ENSBIXG00005030398) PRDM13 (ENSBIXG00005030415) ENSBIXG00005030422 ENSBIXG00005030448 ENSBIXG00005030467 USP45 (ENSBIXG00005030475) PNISR (ENSBIXG00005030498) COQ3 (ENSBIXG00005030514) FAXC (ENSBIXG00005030527) FBXL4 (ENSBIXG00005030544) POU3F2 (ENSBIXG00005030555) MMS22L (ENSBIXG00005030633) KLHL32 (ENSBIXG00005030681) NDUFAF4 (ENSBIXG00005030722) GPR63 (ENSBIXG00005030728) Yarkand deer MODERN SPECIES 20 CRYBG1 (ENSCHYG00000022057) ATG5 (ENSCHYG00000022719) PRDM1 (ENSCHYG00000022882) PREP (ENSCHYG00000023040) ENSCHYG00000023289 POPDC3 (ENSCHYG00000023314) BVES (ENSCHYG00000023334) LIN28B (ENSCHYG00000023383) HACE1 (ENSCHYG00000023545) ENSCHYG00000024260 ENSCHYG00000024278 ENSCHYG00000024291 GRIK2 (ENSCHYG00000024358) ASCC3 (ENSCHYG00000024791) SIM1 (ENSCHYG00000024834) ENSCHYG00000024861 ##22 PRDM13 (ENSCHYG00000024927) ENSCHYG00000024960 CCNC (ENSCHYG00000025007) TSTD3 (ENSCHYG00000025097) USP45 (ENSCHYG00000025122) PNISR (ENSCHYG00000025150) COQ3 (ENSCHYG00000025175) FAXC (ENSCHYG00000025221) FBXL4 (ENSCHYG00000025242) POU3F2 (ENSCHYG00000025261) MMS22L (ENSCHYG00000025279) KLHL32 (ENSCHYG00000025369) NDUFAF4 (ENSCHYG00000025688) FHL5 (ENSCHYG00000025707) UFL1 (ENSCHYG00000025727) Atlantogenata ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a.c ##37 ENSGT01100000263482.C.c.b.b.b ##37 ENSGT01100000263482.C.c.a.d ##37 Xenarthra ANCESTRAL SPECIES 52 ENSGT01100000263482.A.a.a.d.a.a.b ##37 ENSGT01100000263482.A.a.a.d.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.b #13 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.b.a.b #37 ENSGT01100000263482.C.c.a.d ##37 ENSGT00520000060616 Sloth MODERN SPECIES 5998 AP2B1 (ENSCHOG00000010864) #22 RASL10B (ENSCHOG00000010880) #23 ENSCHOG00000010885 #24 Armadillo MODERN SPECIES 596 CCL11 (ENSDNOG00000045103) ##37 CCL13 (ENSDNOG00000047977) ##37 ENSDNOG00000042008 TMEM132E (ENSDNOG00000049593) CCT6B (ENSDNOG00000019733) ZNF830 (ENSDNOG00000019735) LIG3 (ENSDNOG00000007045) #7 RFFL (ENSDNOG00000007069) #8 RAD51D (ENSDNOG00000036437) #9 FNDC8 (ENSDNOG00000005076) #10 NLE1 (ENSDNOG00000032603) #11 UNC45B (ENSDNOG00000005083) #12 SLFN5 (ENSDNOG00000033270) #13 SLFN14 (ENSDNOG00000044386) #19 PEX12 (ENSDNOG00000039512) #21 AP2B1 (ENSDNOG00000005114) #22 RASL10B (ENSDNOG00000035899) #23 GAS2L2 (ENSDNOG00000005139) #24 MMP28 (ENSDNOG00000038104) #26 C17orf50 (ENSDNOG00000043929) #25 TAF15 (ENSDNOG00000006956) #27 HEATR9 (ENSDNOG00000017262) #28 ENSDNOG00000006974 #29 ENSDNOG00000049803 #33 ENSDNOG00000046700 #35 ENSDNOG00000033984 ##37 ENSDNOG00000032465 #37 ENSDNOG00000043185 #37 ENSDNOG00000033530 ##37 ENSDNOG00000046185 ENSDNOG00000035136 Afrotheria ANCESTRAL SPECIES 2 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.a ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT00940000168309 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.a.c ##37 ENSGT01100000263482.C.c.b.b.b ##37 ENSGT01100000263482.C.c.a.d ##37 ENSGT00530000064879 ENSGT00520000060616 Afrotheria_a ANCESTRAL SPECIES 2 ENSGT00940000154991.b ENSGT01100000263482.A.a.a.d.a.a.a.a ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339 ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT00940000168309 ENSGT01100000263482.C.c.b.a.b.b #33 ENSGT01100000263482.C.c.b.a.b.a #35 ENSGT01100000263482.C.c.a.c ##37 ENSGT01100000263482.C.c.b.b.b ##37 ENSGT00530000064879 ENSGT01100000263482.C.c.a.d ##37 ENSGT00520000060616 ENSGT00390000016675 Elephant MODERN SPECIES 310 ENSLAFG00000004719 ##37 CCL8 (ENSLAFG00000013122) ##37 ENSLAFG00000002372 TMEM132E (ENSLAFG00000006799) CCT6B (ENSLAFG00000018317) ZNF830 (ENSLAFG00000030751) LIG3 (ENSLAFG00000001574) #7 RFFL (ENSLAFG00000018323) #8 RAD51D (ENSLAFG00000018328) #9 FNDC8 (ENSLAFG00000018333) #10 NLE1 (ENSLAFG00000018338) #11 UNC45B (ENSLAFG00000018342) #12 ENSLAFG00000016240 #17 SLFN14 (ENSLAFG00000027215) #19 PEX12 (ENSLAFG00000011836) #21 AP2B1 (ENSLAFG00000015777) #22 RASL10B (ENSLAFG00000021899) #23 GAS2L2 (ENSLAFG00000022800) #24 ENSLAFG00000023016 #18 C17orf50 (ENSLAFG00000025653) #25 MMP28 (ENSLAFG00000018326) #26 TAF15 (ENSLAFG00000018332) #27 HEATR9 (ENSLAFG00000025920) #28 ENSLAFG00000011380 ##37 CCL14 (ENSLAFG00000020887) #33 ENSLAFG00000008591 #35 ENSLAFG00000011865 ##37 ENSLAFG00000014470 ##37 ENSLAFG00000030741 ENSLAFG00000026952 ENSLAFG00000026430 Hyrax MODERN SPECIES 4887 AP2B1 (ENSPCAG00000006461) #22 GAS2L2 (ENSPCAG00000006543) #24 Tenrec MODERN SPECIES 8070 SLFN14 (ENSETEG00000005220) #19 AP2B1 (ENSETEG00000005222) #22 RASL10B (ENSETEG00000005229) #23 ENSETEG00000005230 ENSETEG00000005235 #26 Marsupialia ANCESTRAL SPECIES 2 ENSGT01100000263482.A.a.a.a.a ##37 ENSGT01100000263482.A.a.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.b #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.a.b.a.a #35 ENSGT01100000263482.C.c.a.b ##37 ENSGT01100000263482.C.c.a.a ##37 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Marsupialia_b ANCESTRAL SPECIES 1 ENSGT01100000263482.A.a.a.a.b.a ##37 ENSGT01100000263482.A.a.a.b ##37 ENSGT01030000234760 ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000162866 #24 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.b #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.a.b.a.a #35 ENSGT01100000263482.C.c.a.b ##37 ENSGT01100000263482.C.c.a.a ##37 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b Diprotodontia ANCESTRAL SPECIES 5 ENSGT01100000263482.A.a.a.a.b.b ##37 ENSGT01100000263482.A.a.a.a.b.a ##37 ENSGT01100000263482.A.a.a.b ##37 ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.b #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.a.b.a.a #35 ENSGT01100000263482.C.c.a.b ##37 ENSGT01100000263482.C.c.a.a ##37 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT01100000263482.A.a.a.a.b.b ##37 ENSGT01100000263482.A.a.a.a.b.a ##37 ENSGT01100000263482.A.a.a.b ##37 ENSGT00940000158479 ENSGT00940000156339.l ENSGT00390000012151 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00390000006458 #10 ENSGT00940000157881 #11 ENSGT00940000157654 #12 ENSGT00410000025651.A.b.a.a.a.a #17 ENSGT00410000025651.A.b.b #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000162866 #24 ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000007247 #28 ENSGT01100000263482.D #29 ENSGT01100000263482.C.c.b.a.b.a.b #35 ENSGT01100000263482.C.c.b.a.a ##37 ENSGT01100000263482.C.c.b.a.b.a.a #35 ENSGT01100000263482.C.c.a.b ##37 ENSGT01100000263482.C.c.a.a ##37 ENSGT00970000198103 ENSGT00390000016675 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1007 TMEM98 (ENSVURG00010011902) ASIC2 (ENSVURG00010011918) ENSVURG00010011934 ENSVURG00010011947 ##37 ENSVURG00010011968 ENSVURG00010012137 ENSVURG00010012324 ENSVURG00010012330 #7 ENSVURG00010012349 #8 ENSVURG00010012360 #9 ENSVURG00010012368 #11 ENSVURG00010012378 #12 ENSVURG00010012399 #17 ENSVURG00010012414 #19 ENSVURG00010012437 #21 ENSVURG00010012444 #22 ENSVURG00010012483 #23 ENSVURG00010012517 ENSVURG00010012622 #25 ENSVURG00010012627 #26 ENSVURG00010012645 #27 ENSVURG00010012661 #29 ENSVURG00010012668 #35 ENSVURG00010012682 ##37 ENSVURG00010012701 ##37 ENSVURG00010012706 ##37 ENSVURG00010012788 ENSVURG00010013938 ENSVURG00010013966 ENSVURG00010013974 ENSVURG00010013981 Common wonbat MODERN SPECIES 1007 ENSVURG00010015097 ENSVURG00010015121 ##37 ENSVURG00010015173 ENSVURG00010015376 ENSVURG00010015482 ENSVURG00010015491 #7 ENSVURG00010015527 #8 ENSVURG00010015558 #9 ENSVURG00010015596 #11 ENSVURG00010015626 #12 ENSVURG00010015693 #17 ENSVURG00010015701 #19 ENSVURG00010015711 #21 ENSVURG00010015727 #22 ENSVURG00010015773 #23 ENSVURG00010015798 ENSVURG00010015909 #25 ENSVURG00010015920 #26 ENSVURG00010015930 #27 ENSVURG00010015947 #29 ENSVURG00010015955 #35 ENSVURG00010015981 ##37 ENSVURG00010015996 ##37 ENSVURG00010016004 ##37 ENSVURG00010016008 ENSVURG00010016074 ENSVURG00010017226 ENSVURG00010017283 ENSVURG00010017302 koala MODERN SPECIES 4 CCT6B (ENSPCIG00000003668) ZNF830 (ENSPCIG00000003674) LIG3 (ENSPCIG00000003680) #7 RFFL (ENSPCIG00000003696) #8 RAD51D (ENSPCIG00000014413) #9 ENSPCIG00000031157 #10 NLE1 (ENSPCIG00000007697) #11 UNC45B (ENSPCIG00000005742) #12 ENSPCIG00000003699 #17 SLFN14 (ENSPCIG00000003715) #19 PEX12 (ENSPCIG00000003725) #21 AP2B1 (ENSPCIG00000003733) #22 RASL10B (ENSPCIG00000003771) #23 ENSPCIG00000032524 ENSPCIG00000003773 #24 ENSPCIG00000003779 #25 MMP28 (ENSPCIG00000003781) #26 TAF15 (ENSPCIG00000003783) #27 ENSPCIG00000003789 #28 ENSPCIG00000003792 #29 ENSPCIG00000003794 #35 ENSPCIG00000036427 ##37 ENSPCIG00000003798 #35 ENSPCIG00000003810 ##37 ENSPCIG00000026474 ##37 ENSPCIG00000026475 ##37 ENSPCIG00000026476 Wallaby MODERN SPECIES 9923 AP2B1 (ENSMEUG00000015813) #22 RASL10B (ENSMEUG00000015827) #23 ENSMEUG00000015835 ENSMEUG00000015861 #25 MMP28 (ENSMEUG00000015871) #26 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000013914 ##37 ENSSHAG00000013669 ##37 ENSSHAG00000013613 TMEM132E (ENSSHAG00000011259) ZNF830 (ENSSHAG00000030733) CCT6B (ENSSHAG00000022288) LIG3 (ENSSHAG00000006134) #7 RFFL (ENSSHAG00000005858) #8 RAD51D (ENSSHAG00000004510) #9 ENSSHAG00000004314 #10 NLE1 (ENSSHAG00000004045) #11 UNC45B (ENSSHAG00000003067) #12 ENSSHAG00000002296 #17 SLFN14 (ENSSHAG00000000713) #19 PEX12 (ENSSHAG00000006809) #21 AP2B1 (ENSSHAG00000005269) #22 RASL10B (ENSSHAG00000024132) #23 ENSSHAG00000030243 #24 ENSSHAG00000000447 ENSSHAG00000023276 #25 MMP28 (ENSSHAG00000026854) #26 TAF15 (ENSSHAG00000003105) #27 ENSSHAG00000001914 #28 ENSSHAG00000023386 #35 ENSSHAG00000020752 ##37 ENSSHAG00000000454 #35 ENSSHAG00000030788 ##37 ENSSHAG00000020853 ##37 ENSSHAG00000001832 ##37 ENSSHAG00000022730 ##37 ENSSHAG00000026107 #33 Opossum MODERN SPECIES 1 ENSMODG00000019157 ##37 ENSMODG00000019155 ZNF830 (ENSMODG00000019150) CCT6B (ENSMODG00000019152) LIG3 (ENSMODG00000019147) #7 RFFL (ENSMODG00000019143) #8 RAD51D (ENSMODG00000019141) #9 ENSMODG00000028821 #10 NLE1 (ENSMODG00000019137) #11 UNC45B (ENSMODG00000019133) #12 ENSMODG00000039989 ENSMODG00000039391 #17 SLFN14 (ENSMODG00000019130) #19 ENSMODG00000027779 PEX12 (ENSMODG00000019129) #21 AP2B1 (ENSMODG00000019128) #22 RASL10B (ENSMODG00000019126) #23 ENSMODG00000019125 ENSMODG00000046981 #25 MMP28 (ENSMODG00000019124) #26 TAF15 (ENSMODG00000019123) #27 ENSMODG00000019121 #29 ENSMODG00000028688 #35 ENSMODG00000028122 ##37 ENSMODG00000019120 #35 ENSMODG00000019114 ##37 ENSMODG00000025694 ##37 ENSMODG00000019113 ##37 HEATR6 (ENSMODG00000019111) HNF1B (ENSMODG00000019108) ENSMODG00000047438 Platypus MODERN SPECIES 8 ENSOANG00000050426 ENSOANG00000048769 ENSOANG00000002929 ##37 ENSOANG00000047804 ENSOANG00000044227 ENSOANG00000021072 ##37 ENSOANG00000050489 TMEM132E (ENSOANG00000043508) LIG3 (ENSOANG00000050784) #7 RFFL (ENSOANG00000049711) #8 ENSOANG00000046664 #9 NLE1 (ENSOANG00000036408) #11 ENSOANG00000044566 UNC45B (ENSOANG00000044231) #12 PEX12 (ENSOANG00000042515) #21 AP2B1 (ENSOANG00000050274) #22 RASL10B (ENSOANG00000038310) #23 ENSOANG00000040830 ENSOANG00000045644 #25 MMP28 (ENSOANG00000014274) #26 TAF15 (ENSOANG00000014273) #27 ENSOANG00000036567 POR (ENSOANG00000043253) ENSOANG00000042315 STYXL1 (ENSOANG00000040559) MDH2 (ENSOANG00000001378) ENSOANG00000049511 ENSOANG00000041397 ENSOANG00000045340 HSPB1 (ENSOANG00000043454) YWHAG (ENSOANG00000044061) Sauria ANCESTRAL SPECIES 18 ENSGT00940000158514 ENSGT00940000161467 ENSGT00940000155974 ENSGT00940000153253.b.a ENSGT00940000153594.d ENSGT01100000263482.A.b ##37 ENSGT01100000263482.F ##37 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00940000165977 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 Archelosauria ANCESTRAL SPECIES 18 ENSGT00960000188078 ENSGT00940000154126.h.b.a.b ENSGT01100000263482.C.b.a.a #37 ENSGT01100000263482.B.b #32 ENSGT01100000263482.D #29 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00940000165977 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 Archosauria ANCESTRAL SPECIES 18 ENSGT01100000263482.B.a #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 Aves ANCESTRAL SPECIES 18 ENSGT00390000008983.b ENSGT00940000156339 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 African ostrich MODERN SPECIES 1007 LIG3 (ENSSCUG00000013712) #7 RFFL (ENSSCUG00000013718) #8 RAD51D (ENSSCUG00000013719) #9 UNC45B (ENSSCUG00000013721) #12 ENSSCUG00000013725 ##19 PEX12 (ENSSCUG00000013729) #21 AP2B1 (ENSSCUG00000013799) #22 RASL10B (ENSSCUG00000013917) #23 MMP28 (ENSSCUG00000013920) #26 TAF15 (ENSSCUG00000013929) #27 RHBDD2 (ENSSCUG00000013940) POR (ENSSCUG00000013947) TMEM120A (ENSSCUG00000013956) ENSSCUG00000013958 MDH2 (ENSSCUG00000013964) Neognathae ANCESTRAL SPECIES 18 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Neognathae_b ANCESTRAL SPECIES 20 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Passeriformes ANCESTRAL SPECIES 18 ENSGT00940000156339 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Passeriformes_d ANCESTRAL SPECIES 18 ENSGT00940000156339 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00940000165977 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 Passeriformes_g ANCESTRAL SPECIES 18 ENSGT00940000156339 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Medium ground finch MODERN SPECIES 90 ENSGFOG00000003371 CCT6B (ENSGFOG00000002959) PSPH (ENSGFOG00000002913) NIPSNAP2 (ENSGFOG00000002871) MRPS17 (ENSGFOG00000002862) ENSGFOG00000002814 ENSGFOG00000002803 #32 ENSGFOG00000002785 ENSGFOG00000002768 TMEM132E (ENSGFOG00000002732) LIG3 (ENSGFOG00000002126) #7 RFFL (ENSGFOG00000002052) #8 RAD51D (ENSGFOG00000002037) #9 UNC45B (ENSGFOG00000001128) #12 PEX12 (ENSGFOG00000000983) #21 AP2B1 (ENSGFOG00000000948) #22 RASL10B (ENSGFOG00000000933) #23 ENSGFOG00000000917 MMP28 (ENSGFOG00000000904) #26 ENSGFOG00000000894 TAF15 (ENSGFOG00000000872) #27 ENSGFOG00000000852 POR (ENSGFOG00000000818) TMEM120A (ENSGFOG00000000663) ENSGFOG00000000640 MDH2 (ENSGFOG00000000621) SRRM3 (ENSGFOG00000000606) ENSGFOG00000000595 HSPB1 (ENSGFOG00000000587) YWHAG (ENSGFOG00000000583) ENSGFOG00000000570 Passeroidea ANCESTRAL SPECIES 20 ENSGT00940000156339 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT00940000155882.a.a ENSGT01030000235453 ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Zebra finch MODERN SPECIES 10 ENSTGUG00000005131 CCT6B (ENSTGUG00000005105) PSPH (ENSTGUG00000021934) NIPSNAP2 (ENSTGUG00000005056) MRPS17 (ENSTGUG00000026540) ENSTGUG00000005025 ENSTGUG00000005024 #32 ENSTGUG00000024039 TMEM132E (ENSTGUG00000005003) LIG3 (ENSTGUG00000004932) #7 RFFL (ENSTGUG00000004921) #8 RAD51D (ENSTGUG00000004887) #9 UNC45B (ENSTGUG00000004851) #12 ENSTGUG00000026935 PEX12 (ENSTGUG00000004847) #21 AP2B1 (ENSTGUG00000004771) #22 RASL10B (ENSTGUG00000023856) #23 ENSTGUG00000004758 MMP28 (ENSTGUG00000004745) #26 TAF15 (ENSTGUG00000004702) #27 ENSTGUG00000004693 POR (ENSTGUG00000004657) TMEM120A (ENSTGUG00000004630) ENSTGUG00000004616 MDH2 (ENSTGUG00000004571) SRRM3 (ENSTGUG00000027467) HSPB1 (ENSTGUG00000004559) ENSTGUG00000021133 YWHAG (ENSTGUG00000004553) SSC4D (ENSTGUG00000004547) DTX2 (ENSTGUG00000004526) Common canary MODERN SPECIES 28 CCT6B (ENSSCAG00000006650) PSPH (ENSSCAG00000006646) NIPSNAP2 (ENSSCAG00000006643) MRPS17 (ENSSCAG00000006640) ENSSCAG00000006625 ENSSCAG00000006618 #32 ENSSCAG00000006617 ENSSCAG00000006614 TMEM132E (ENSSCAG00000006611) LIG3 (ENSSCAG00000006598) #7 RFFL (ENSSCAG00000006590) #8 RAD51D (ENSSCAG00000006580) #9 UNC45B (ENSSCAG00000006357) #12 ENSSCAG00000006312 PEX12 (ENSSCAG00000006302) #21 AP2B1 (ENSSCAG00000006287) #22 RASL10B (ENSSCAG00000006283) #23 ENSSCAG00000006274 MMP28 (ENSSCAG00000006269) #26 TAF15 (ENSSCAG00000006263) #27 RHBDD2 (ENSSCAG00000006252) POR (ENSSCAG00000006242) TMEM120A (ENSSCAG00000006149) ENSSCAG00000006123 MDH2 (ENSSCAG00000006093) HSPB1 (ENSSCAG00000006083) YWHAG (ENSSCAG00000006079) ENSSCAG00000006074 ENSSCAG00000006072 DTX2 (ENSSCAG00000006060) ENSSCAG00000006046 Flycatcher MODERN SPECIES 9 ENSFALG00000006781 CHCHD2 (ENSFALG00000006769) ENSFALG00000006782 PSPH (ENSFALG00000006784) NIPSNAP2 (ENSFALG00000006790) MRPS17 (ENSFALG00000026220) ENSFALG00000006800 ENSFALG00000028260 #32 ENSFALG00000023753 ENSFALG00000006806 LIG3 (ENSFALG00000009743) #7 RFFL (ENSFALG00000009730) #8 RAD51D (ENSFALG00000009726) #9 UNC45B (ENSFALG00000009721) #12 PEX12 (ENSFALG00000009719) #21 AP2B1 (ENSFALG00000009715) #22 RASL10B (ENSFALG00000027159) #23 ENSFALG00000027238 MMP28 (ENSFALG00000009701) #26 ENSFALG00000009696 #27 ENSFALG00000009693 POR (ENSFALG00000009688) TMEM120A (ENSFALG00000009669) MDH2 (ENSFALG00000009620) SRRM3 (ENSFALG00000009603) ENSFALG00000026877 HSPB1 (ENSFALG00000009587) YWHAG (ENSFALG00000026928) ENSFALG00000028705 ENSFALG00000009575 DTX2 (ENSFALG00000009561) Great tit MODERN SPECIES 9 PHKG1 (ENSPMJG00000019011) SUMF2 (ENSPMJG00000019010) CCT6B (ENSPMJG00000019007) PSPH (ENSPMJG00000019006) NIPSNAP2 (ENSPMJG00000019005) MRPS17 (ENSPMJG00000019004) ENSPMJG00000019003 ENSPMJG00000019002 ENSPMJG00000019001 TMEM132E (ENSPMJG00000019000) LIG3 (ENSPMJG00000018995) #7 RFFL (ENSPMJG00000018994) #8 RAD51D (ENSPMJG00000018993) #9 UNC45B (ENSPMJG00000018992) #12 PEX12 (ENSPMJG00000018990) #21 AP2B1 (ENSPMJG00000018989) #22 RASL10B (ENSPMJG00000018988) #23 ENSPMJG00000018987 MMP28 (ENSPMJG00000018986) #26 TAF15 (ENSPMJG00000018985) #27 RHBDD2 (ENSPMJG00000018984) POR (ENSPMJG00000018982) TMEM120A (ENSPMJG00000018981) ENSPMJG00000018980 MDH2 (ENSPMJG00000018979) SRRM3 (ENSPMJG00000018978) HSPB1 (ENSPMJG00000018977) YWHAG (ENSPMJG00000018976) SSC4D (ENSPMJG00000018975) DTX2 (ENSPMJG00000018974) UPK3B (ENSPMJG00000018973) Neognathae_c ANCESTRAL SPECIES 22 ENSGT00390000003115 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00950000183145.D ENSGT00940000157641 Golden eagle MODERN SPECIES 1 NIPSNAP2 (ENSACCG00020004694) MRPS17 (ENSACCG00020004684) ENSACCG00020004671 ENSACCG00020004655 #32 ENSACCG00020004647 ENSACCG00020004634 #32 ENSACCG00020004625 ENSACCG00020004618 TMEM132E (ENSACCG00020004605) LIG3 (ENSACCG00020004580) #7 RFFL (ENSACCG00020004557) #8 RAD51D (ENSACCG00020004546) #9 ENSACCG00020004538 UNC45B (ENSACCG00020004519) #12 PEX12 (ENSACCG00020004505) #21 AP2B1 (ENSACCG00020004479) #22 RASL10B (ENSACCG00020004455) #23 ENSACCG00020004447 MMP28 (ENSACCG00020004423) #26 TAF15 (ENSACCG00020004390) #27 RHBDD2 (ENSACCG00020004381) ENSACCG00020004375 POR (ENSACCG00020004354) TMEM120A (ENSACCG00020004328) ENSACCG00020004308 MDH2 (ENSACCG00020004291) ENSACCG00020004279 ENSACCG00020004262 HSPB1 (ENSACCG00020004255) ENSACCG00020004250 YWHAG (ENSACCG00020004244) Kakapo MODERN SPECIES 58 CCT6B (ENSSHBG00005006893) PSPH (ENSSHBG00005006877) NIPSNAP2 (ENSSHBG00005006860) ENSSHBG00005006847 ENSSHBG00005006541 ENSSHBG00005006507 #32 ENSSHBG00005006454 ENSSHBG00005006430 TMEM132E (ENSSHBG00005006409) LIG3 (ENSSHBG00005006388) #7 RFFL (ENSSHBG00005006362) #8 RAD51D (ENSSHBG00005006327) #9 ENSSHBG00005006311 UNC45B (ENSSHBG00005006213) #12 PEX12 (ENSSHBG00005006156) #21 AP2B1 (ENSSHBG00005006021) #22 RASL10B (ENSSHBG00005006000) #23 ENSSHBG00005005958 MMP28 (ENSSHBG00005005940) #26 TAF15 (ENSSHBG00005005797) #27 RHBDD2 (ENSSHBG00005005771) POR (ENSSHBG00005005716) TMEM120A (ENSSHBG00005000765) ENSSHBG00005000755 MDH2 (ENSSHBG00005000746) SRRM3 (ENSSHBG00005013038) ENSSHBG00005013030 HSPB1 (ENSSHBG00005013023) YWHAG (ENSSHBG00005013017) ENSSHBG00005012997 ENSSHBG00005012984 Galloanserae ANCESTRAL SPECIES 17 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Phasianidae ANCESTRAL SPECIES 17 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT01070000257310 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 Japanese quail MODERN SPECIES 10 MRPS17 (ENSCJPG00005010031) ENSCJPG00005010024 ENSCJPG00005010023 #32 ENSCJPG00005010021 #32 ENSCJPG00005010019 ENSCJPG00005010017 #32 ENSCJPG00005010016 ENSCJPG00005010014 TMEM132E (ENSCJPG00005009953) LIG3 (ENSCJPG00005009942) #7 RFFL (ENSCJPG00005009925) #8 RAD51D (ENSCJPG00005009921) #9 ENSCJPG00005009920 UNC45B (ENSCJPG00005009918) #12 PEX12 (ENSCJPG00005009914) #21 AP2B1 (ENSCJPG00005009912) #22 RASL10B (ENSCJPG00005009905) #23 ENSCJPG00005009902 MMP28 (ENSCJPG00005009900) #26 TAF15 (ENSCJPG00005009893) #27 ENSCJPG00005009827 POR (ENSCJPG00005009821) TMEM120A (ENSCJPG00005009816) ENSCJPG00005009815 MDH2 (ENSCJPG00005009814) SRRM3 (ENSCJPG00005009813) HSPB1 (ENSCJPG00005009812) YWHAG (ENSCJPG00005009811) SSC4D (ENSCJPG00005009805) ENSCJPG00005009804 DTX2 (ENSCJPG00005009802) Phasianidae_b ANCESTRAL SPECIES 17 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT01100000263482.B.a.c #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT01070000257310 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 Chicken MODERN SPECIES 10 ENSGALG00010029641 #32 ENSGALG00010029643 ENSGALG00010029962 #32 ENSGALG00010029640 ENSGALG00010029639 #32 ENSGALG00010029637 CCL26 (ENSGALG00010029635) CCLI5 (ENSGALG00010029956) TMEM132E (ENSGALG00010029632) LIG3 (ENSGALG00010029631) #7 RFFL (ENSGALG00010029950) #8 RAD51D (ENSGALG00010029630) #9 ENSGALG00010029786 UNC45B (ENSGALG00010029628) #12 PEX12 (ENSGALG00010029627) #21 AP2B1 (ENSGALG00010029626) #22 RASL10B (ENSGALG00010029624) #23 ENSGALG00010029623 MMP28 (ENSGALG00010029622) #26 TAF15 (ENSGALG00010029621) #27 ENSGALG00010029620 ENSGALG00010029619 POR (ENSGALG00010029617) TMEM120A (ENSGALG00010029616) ENSGALG00010029615 MDH2 (ENSGALG00010029614) SRRM3 (ENSGALG00010029613) ENSGALG00010029785 HSPB1 (ENSGALG00010029612) YWHAG (ENSGALG00010029611) SSC4D (ENSGALG00010029159) Turkey MODERN SPECIES 13 ENSMGAG00000003662 ENSMGAG00000003677 ENSMGAG00000022940 ENSMGAG00000003680 ENSMGAG00000003690 ENSMGAG00000003753 MDH2 (ENSMGAG00000003716) ENSMGAG00000003805 ENSMGAG00000003770 ENSMGAG00000003839 ENSMGAG00000021885 #27 ENSMGAG00000003842 #27 ENSMGAG00000004013 #23 ENSMGAG00000004003 ENSMGAG00000003978 #26 ENSMGAG00000004018 #22 ENSMGAG00000004214 #9 ENSMGAG00000019489 UNC45B (ENSMGAG00000004173) #12 ENSMGAG00000004153 ##19 ENSMGAG00000004125 #21 ENSMGAG00000004064 #7 ENSMGAG00000004256 #8 ENSMGAG00000017271 ENSMGAG00000001791 ENSMGAG00000019463 #32 ENSMGAG00000017879 ENSMGAG00000019065 ENSMGAG00000004283 ENSMGAG00000021214 #32 ENSMGAG00000004292 Anatidae ANCESTRAL SPECIES 27 ENSGT00950000183018.a.d ENSGT00530000064130 ENSGT01020000230354.B.b.a.a ENSGT00950000182865.b.b.a ENSGT01100000263482.B.a.c #32 ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00950000185966 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000162625 ENSGT00940000155882.a.a ENSGT01030000235453 ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Pink-footed goose MODERN SPECIES 38 MRPS17 (ENSABRG00000007069) ENSABRG00000007059 ENSABRG00000007050 #32 ENSABRG00000007039 ENSABRG00000007029 #32 ENSABRG00000007024 ENSABRG00000007021 TMEM132E (ENSABRG00000007017) LIG3 (ENSABRG00000004295) #7 RFFL (ENSABRG00000004062) #8 RAD51D (ENSABRG00000003937) #9 ENSABRG00000003886 UNC45B (ENSABRG00000002564) #12 ENSABRG00000002424 ##19 PEX12 (ENSABRG00000002398) #21 AP2B1 (ENSABRG00000002319) #22 RASL10B (ENSABRG00000002299) #23 ENSABRG00000002276 MMP28 (ENSABRG00000002268) #26 TAF15 (ENSABRG00000002253) #27 RHBDD2 (ENSABRG00000002103) POR (ENSABRG00000002005) TMEM120A (ENSABRG00000001955) ENSABRG00000001887 MDH2 (ENSABRG00000001842) SRRM3 (ENSABRG00000001730) HSPB1 (ENSABRG00000001700) ENSABRG00000001693 YWHAG (ENSABRG00000001641) SSC4D (ENSABRG00000001586) DTX2 (ENSABRG00000001492) Duck MODERN SPECIES 11 SUMF2 (ENSAPLG00000011312) CCT6B (ENSAPLG00000010870) PSPH (ENSAPLG00000010694) NIPSNAP2 (ENSAPLG00000010581) MRPS17 (ENSAPLG00000010523) ENSAPLG00000009847 ENSAPLG00000027650 #32 ENSAPLG00000031023 ENSAPLG00000026938 ENSAPLG00000009358 ENSAPLG00000021360 TMEM132E (ENSAPLG00000009524) LIG3 (ENSAPLG00000008964) #7 RFFL (ENSAPLG00000008748) #8 RAD51D (ENSAPLG00000008196) #9 AP2B1 (ENSAPLG00000006779) #22 ENSAPLG00000030046 #23 ENSAPLG00000023918 MMP28 (ENSAPLG00000006470) #26 RHBDD2 (ENSAPLG00000025011) TAF15 (ENSAPLG00000006217) #27 POR (ENSAPLG00000005585) TMEM120A (ENSAPLG00000005153) MDH2 (ENSAPLG00000004591) SRRM3 (ENSAPLG00000004545) YWHAG (ENSAPLG00000004442) ENSAPLG00000003804 ALKBH4 (ENSAPLG00000003499) ORAI2 (ENSAPLG00000003488) PRKRIP1 (ENSAPLG00000026029) SH2B2 (ENSAPLG00000028018) Australian saltwater crocodile MODERN SPECIES 50 LIG3 (ENSCPRG00005005479) #7 RFFL (ENSCPRG00005005502) #8 RAD51D (ENSCPRG00005005512) #9 UNC45B (ENSCPRG00005005522) #12 ENSCPRG00005005532 ENSCPRG00005005537 ##19 ENSCPRG00005005541 PEX12 (ENSCPRG00005005543) #21 AP2B1 (ENSCPRG00005005555) #22 RASL10B (ENSCPRG00005005573) #23 ENSCPRG00005005576 ENSCPRG00005005590 MMP28 (ENSCPRG00005005593) #26 TAF15 (ENSCPRG00005005599) #27 RHBDD2 (ENSCPRG00005005613) POR (ENSCPRG00005005620) TMEM120A (ENSCPRG00005005658) ENSCPRG00005005857 MDH2 (ENSCPRG00005005862) ENSCPRG00005005867 HSPB1 (ENSCPRG00005005874) YWHAG (ENSCPRG00005005881) SSC4D (ENSCPRG00005005887) DTX2 (ENSCPRG00005005904) Cryptodira ANCESTRAL SPECIES 18 ENSGT01100000263482.C.b.b.b #37 ENSGT01100000263482.C.b.b.a #37 ENSGT01100000263482.D #29 ENSGT01100000263482.C.b.a.b #37 ENSGT01100000263482.B.a #32 ENSGT00950000182865.b.b.a ENSGT00940000170193 ENSGT01030000235390 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a Testudinoidea ANCESTRAL SPECIES 15 ENSGT01100000263482.C.b.a.a #37 ENSGT01100000263482.C.b.b.b #37 ENSGT01100000263482.C.b.b.a #37 ENSGT01100000263482.D #29 ENSGT01100000263482.C.b.a.b #37 ENSGT01100000263482.B.a #32 ENSGT00950000182865.b.b.a ENSGT01030000235390.b ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a Emydidae ANCESTRAL SPECIES 16 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00410000025651.A.a.c ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT00900000142991 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a Three-toed box turtle MODERN SPECIES 106 ENSTMTG00000020580 TMEM132E (ENSTMTG00000020593) LIG3 (ENSTMTG00000020663) #7 RFFL (ENSTMTG00000020681) #8 RAD51D (ENSTMTG00000020691) #9 UNC45B (ENSTMTG00000020729) #12 ENSTMTG00000021058 ##19 ENSTMTG00000021076 #18 PEX12 (ENSTMTG00000021086) #21 AP2B1 (ENSTMTG00000021100) #22 RASL10B (ENSTMTG00000021120) #23 ENSTMTG00000021131 C17orf50 (ENSTMTG00000021173) #25 MMP28 (ENSTMTG00000021182) #26 TAF15 (ENSTMTG00000021209) #27 ENSTMTG00000021228 RHBDD2 (ENSTMTG00000021234) POR (ENSTMTG00000021239) TMEM120A (ENSTMTG00000021257) STYXL1 (ENSTMTG00000021281) MDH2 (ENSTMTG00000021330) HSPB1 (ENSTMTG00000021338) YWHAG (ENSTMTG00000021346) SSC4D (ENSTMTG00000003093) DTX2 (ENSTMTG00000003130) painted turtle MODERN SPECIES 15 KCNIP4 (ENSCPBG00000027922) PACRGL (ENSCPBG00000027917) SLIT2 (ENSCPBG00000027876) CORIN (ENSCPBG00000027875) ATP10D (ENSCPBG00000027872) COMMD8 (ENSCPBG00000027871) ENSCPBG00000027869 GABRA4 (ENSCPBG00000027868) GABRA2 (ENSCPBG00000027867) GABRG1 (ENSCPBG00000027866) ENSCPBG00000027865 ENSCPBG00000027863 UNC45B (ENSCPBG00000027851) #12 ENSCPBG00000027830 ##19 PEX12 (ENSCPBG00000027827) #21 AP2B1 (ENSCPBG00000027826) #22 RASL10B (ENSCPBG00000027825) #23 ENSCPBG00000027824 C17orf50 (ENSCPBG00000027822) #25 MMP28 (ENSCPBG00000027821) #26 TAF15 (ENSCPBG00000027820) #27 ENSCPBG00000027818 RHBDD2 (ENSCPBG00000027817) POR (ENSCPBG00000027812) TMEM120A (ENSCPBG00000027800) STYXL1 (ENSCPBG00000027788) MDH2 (ENSCPBG00000027786) SRRM3 (ENSCPBG00000027784) ENSCPBG00000027783 HSPB1 (ENSCPBG00000027782) YWHAG (ENSCPBG00000027781) Testudinidae ANCESTRAL SPECIES 19 ENSGT01100000263482.C.b.b.a #37 ENSGT01100000263482.D #29 ENSGT01100000263482.C.b.a.b #37 ENSGT01100000263482.B.a #32 ENSGT00950000182865.b.b.a ENSGT00960000192959 ENSGT00940000162512 ENSGT01030000235390.b ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00410000025651.A.a ##19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00390000007830 #25 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00390000010113 ENSGT00390000016686 ENSGT00900000142991 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Abingdon island giant tortoise MODERN SPECIES 1418 ENSCABG00000004436 #29 ENSCABG00000004432 #37 CCL16 (ENSCABG00000004421) #32 ENSCABG00000004416 ENSCABG00000004415 ENSCABG00000004413 ENSCABG00000004412 ##37 ENSCABG00000004411 TMEM132E (ENSCABG00000004406) LIG3 (ENSCABG00000002691) #7 RFFL (ENSCABG00000002669) #8 RAD51D (ENSCABG00000002447) #9 UNC45B (ENSCABG00000002434) #12 ENSCABG00000002431 ##19 PEX12 (ENSCABG00000002427) #21 AP2B1 (ENSCABG00000002423) #22 RASL10B (ENSCABG00000002413) #23 ENSCABG00000002410 ENSCABG00000002408 #25 MMP28 (ENSCABG00000002406) #26 TAF15 (ENSCABG00000002398) #27 ENSCABG00000002394 RHBDD2 (ENSCABG00000002383) POR (ENSCABG00000002381) TMEM120A (ENSCABG00000002380) ENSCABG00000002378 MDH2 (ENSCABG00000002129) AZIN2 (ENSCABG00000002110) NDUFS5 (ENSCABG00000002109) ENSCABG00000002106 ENSCABG00000002104 Goode s thornscrub tortoise MODERN SPECIES 8 ENSGEVG00005015461 #37 ENSGEVG00005015446 #29 ENSGEVG00005015377 #37 ENSGEVG00005015278 ENSGEVG00005015199 FAM170B (ENSGEVG00005015147) ENSGEVG00005015109 ENSGEVG00005014987 #37 TMEM132E (ENSGEVG00005014760) LIG3 (ENSGEVG00005014673) #7 RFFL (ENSGEVG00005014634) #8 RAD51D (ENSGEVG00005014593) #9 UNC45B (ENSGEVG00005014156) #12 ENSGEVG00005014013 ##19 PEX12 (ENSGEVG00005013971) #21 AP2B1 (ENSGEVG00005013893) #22 RASL10B (ENSGEVG00005013836) #23 ENSGEVG00005013773 C17orf50 (ENSGEVG00005013730) #25 MMP28 (ENSGEVG00005013548) #26 TAF15 (ENSGEVG00005013474) #27 RHBDD2 (ENSGEVG00005013445) POR (ENSGEVG00005013399) TMEM120A (ENSGEVG00005013274) STYXL1 (ENSGEVG00005013243) MDH2 (ENSGEVG00005013216) HSPB1 (ENSGEVG00005013174) YWHAG (ENSGEVG00005013157) ENSGEVG00005013061 DTX2 (ENSGEVG00005012918) UPK3B (ENSGEVG00005012890) Chinese turtle MODERN SPECIES 786 LIG3 (ENSPSIG00000014160) #7 RFFL (ENSPSIG00000014088) #8 RAD51D (ENSPSIG00000013822) #9 UNC45B (ENSPSIG00000013775) #12 ENSPSIG00000013351 ##19 ENSPSIG00000012539 ##19 PEX12 (ENSPSIG00000012532) #21 AP2B1 (ENSPSIG00000007490) #22 RASL10B (ENSPSIG00000007466) #23 CWF19L1 (ENSPSIG00000006990) FZD9 (ENSPSIG00000001750) BAZ1B (ENSPSIG00000006503) ENSPSIG00000006444 MLXIPL (ENSPSIG00000015212) TBL2 (ENSPSIG00000014890) BCL7B (ENSPSIG00000014453) MKS1 (ENSPSIG00000014096) Lepidosauria ANCESTRAL SPECIES 103 ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000010113 ENSGT00390000016686 ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a tuatara MODERN SPECIES 1203 UNC45B (ENSSPUG00000005839) #12 ENSSPUG00000005879 PEX12 (ENSSPUG00000005914) #21 AP2B1 (ENSSPUG00000005938) #22 ENSSPUG00000005963 RASL10B (ENSSPUG00000005974) #23 MMP28 (ENSSPUG00000006018) #26 TAF15 (ENSSPUG00000006042) #27 RHBDD2 (ENSSPUG00000006085) POR (ENSSPUG00000006093) TMEM120A (ENSSPUG00000006102) STYXL1 (ENSSPUG00000006150) MDH2 (ENSSPUG00000006263) SRRM3 (ENSSPUG00000006285) HSPB1 (ENSSPUG00000006322) YWHAG (ENSSPUG00000006341) SSC4D (ENSSPUG00000006350) DTX2 (ENSSPUG00000006368) UPK3B (ENSSPUG00000006384) Episquamata ANCESTRAL SPECIES 13 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000156265.x.b.a.a.a.b ENSGT00940000162625 ENSGT01030000235453 ENSGT00940000155882.a.a Laterata ANCESTRAL SPECIES 41 ENSGT00940000158139 ENSGT00440000038159 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 Common wall lizard MODERN SPECIES 6 DTX2 (ENSPMRG00000017658) ENSPMRG00000017665 ENSPMRG00000017670 YWHAG (ENSPMRG00000017676) ENSPMRG00000017686 HSPB1 (ENSPMRG00000017688) ENSPMRG00000017723 ENSPMRG00000017732 ENSPMRG00000017737 MDH2 (ENSPMRG00000017750) STYXL1 (ENSPMRG00000017774) TMEM120A (ENSPMRG00000017797) POR (ENSPMRG00000017929) RHBDD2 (ENSPMRG00000018356) PEX12 (ENSPMRG00000018371) #21 AP2B1 (ENSPMRG00000018527) #22 RASL10B (ENSPMRG00000018960) #23 ENSPMRG00000018970 MMP28 (ENSPMRG00000018993) #26 ENSPMRG00000019029 UNC45B (ENSPMRG00000019047) #12 ENSPMRG00000019089 RAD51D (ENSPMRG00000019093) #9 RFFL (ENSPMRG00000019104) #8 LIG3 (ENSPMRG00000019161) #7 TMEM132E (ENSPMRG00000019578) RABGEF1 (ENSPMRG00000019642) KCTD7 (ENSPMRG00000019747) TPST1 (ENSPMRG00000019762) CRCP (ENSPMRG00000019769) ASL (ENSPMRG00000019854) Argentine black and white tegu MODERN SPECIES 163 TMEM132E (ENSSMRG00000003737) LIG3 (ENSSMRG00000003745) #7 RFFL (ENSSMRG00000003748) #8 RAD51D (ENSSMRG00000003754) #9 UNC45B (ENSSMRG00000003760) #12 PEX12 (ENSSMRG00000003769) #21 AP2B1 (ENSSMRG00000003773) #22 RASL10B (ENSSMRG00000003821) #23 ENSSMRG00000003825 ENSSMRG00000003830 MMP28 (ENSSMRG00000003832) #26 Toxicofera ANCESTRAL SPECIES 23 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521.l ENSGT00940000157641 Elapidae ANCESTRAL SPECIES 20 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521.l ENSGT00940000157641 Elapidae_a ANCESTRAL SPECIES 20 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521.l ENSGT00940000157641 Acanthophiinae ANCESTRAL SPECIES 11 ENSGT00440000038159 ENSGT00960000192991 ENSGT00940000157044 ENSGT00390000001752 ENSGT00950000183122.B ENSGT00390000014189 ENSGT00390000006030.d.a.b ENSGT00940000161327 ENSGT00940000154540.a ENSGT00940000158479 ENSGT00940000156492 #7 ENSGT00390000012719.a #8 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00960000189835 ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00960000191068 ENSGT00390000000699 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521.l ENSGT00940000157641 Eastern brown snake MODERN SPECIES 40 CHCHD2 (ENSPTXG00000004782) ENSPTXG00000004781 VKORC1L1 (ENSPTXG00000004780) GUSB (ENSPTXG00000004779) ASL (ENSPTXG00000004777) CRCP (ENSPTXG00000004776) TPST1 (ENSPTXG00000004774) KCTD7 (ENSPTXG00000004773) RABGEF1 (ENSPTXG00000004771) TMEM132E (ENSPTXG00000004750) LIG3 (ENSPTXG00000004746) #7 RFFL (ENSPTXG00000004744) #8 RAD51D (ENSPTXG00000004743) #9 UNC45B (ENSPTXG00000003841) #12 PEX12 (ENSPTXG00000003827) #21 AP2B1 (ENSPTXG00000003826) #22 RASL10B (ENSPTXG00000003825) #23 ENSPTXG00000003824 MMP28 (ENSPTXG00000003814) #26 TAF15 (ENSPTXG00000003811) #27 ENSPTXG00000003809 RHBDD2 (ENSPTXG00000003806) POR (ENSPTXG00000003804) TMEM120A (ENSPTXG00000003800) ENSPTXG00000003794 MDH2 (ENSPTXG00000003791) HSPB1 (ENSPTXG00000003790) YWHAG (ENSPTXG00000003789) ENSPTXG00000003788 DTX2 (ENSPTXG00000003786) UPK3B (ENSPTXG00000003784) Mainland tiger snake MODERN SPECIES 44 LIG3 (ENSNSUG00000009329) #7 RFFL (ENSNSUG00000009328) #8 ENSNSUG00000009327 #9 UNC45B (ENSNSUG00000009326) #12 PEX12 (ENSNSUG00000009324) #21 AP2B1 (ENSNSUG00000009247) #22 RASL10B (ENSNSUG00000009246) #23 ENSNSUG00000009245 ENSNSUG00000009244 MMP28 (ENSNSUG00000009243) #26 TAF15 (ENSNSUG00000009242) #27 ENSNSUG00000009241 RHBDD2 (ENSNSUG00000009240) POR (ENSNSUG00000009239) TMEM120A (ENSNSUG00000009238) ENSNSUG00000009228 MDH2 (ENSNSUG00000009227) HSPB1 (ENSNSUG00000009226) YWHAG (ENSNSUG00000009225) ENSNSUG00000009224 DTX2 (ENSNSUG00000009223) Indian cobra DUPLICATION Indian cobra MODERN SPECIES ENSNNAG00000014661 VKORC1L1 (ENSNNAG00000014647) GUSB (ENSNNAG00000014591) ASL (ENSNNAG00000014561) CRCP (ENSNNAG00000014523) ENSNNAG00000014509 TPST1 (ENSNNAG00000014478) KCTD7 (ENSNNAG00000014462) RABGEF1 (ENSNNAG00000014443) TMEM132E (ENSNNAG00000014391) RFFL (ENSNNAG00000014281) #8 LIG3 (ENSNNAG00000014171) #7 RAD51D (ENSNNAG00000014103) #9 UNC45B (ENSNNAG00000014048) #12 PEX12 (ENSNNAG00000014026) #21 AP2B1 (ENSNNAG00000013966) #22 RASL10B (ENSNNAG00000013950) #23 ENSNNAG00000013864 ENSNNAG00000013856 #26 TAF15 (ENSNNAG00000013821) #27 ENSNNAG00000013812 ENSNNAG00000013799 POR (ENSNNAG00000013759) TMEM120A (ENSNNAG00000013725) ENSNNAG00000013666 MDH2 (ENSNNAG00000013654) HSPB1 (ENSNNAG00000013601) YWHAG (ENSNNAG00000013591) ENSNNAG00000013575 ENSNNAG00000013557 ENSNNAG00000013536 Indian cobra MODERN SPECIES 16 ENSNNAG00000008669 #22 ISG15 (ENSNNAG00000008685) P2RX2 (ENSNNAG00000008696) ENSNNAG00000008710 ENSNNAG00000008722 THOC5 (ENSNNAG00000008771) ENSNNAG00000009109 ENSNNAG00000009186 ENSNNAG00000009203 ENSNNAG00000009216 ENSNNAG00000009231 ENSNNAG00000009249 ENSNNAG00000009258 ENSNNAG00000009272 ENSNNAG00000009286 ENSNNAG00000009303 Anura ANCESTRAL SPECIES 78 ENSGT00940000159095 #9 ENSGT00940000157654 #12 ENSGT00950000185966 ENSGT00410000025651.A #19 ENSGT00390000016209 #21 ENSGT00940000155206 #22 ENSGT00940000160764 #23 ENSGT00940000154849.a ENSGT00940000159596 #26 ENSGT00940000156438 #27 ENSGT00940000165977 ENSGT00940000156847 ENSGT00390000007848.a ENSGT00940000164883 ENSGT00390000016686 ENSGT00390000001189.b ENSGT00940000162625 ENSGT00940000155882.a.a ENSGT01090000260061.c.a.c.a ENSGT00940000160521 ENSGT00940000157641 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000012681 ENSLLEG00000012744 ENSLLEG00000012761 ENSLLEG00000012780 NLE1 (ENSLLEG00000012835) #11 ULK2 (ENSLLEG00000012994) ALDH3A2 (ENSLLEG00000013573) ENSLLEG00000014121 ENSLLEG00000014135 RAD51D (ENSLLEG00000014152) #9 ENSLLEG00000014238 UNC45B (ENSLLEG00000014260) #12 ENSLLEG00000014519 ENSLLEG00000013946 #19 PEX12 (ENSLLEG00000014055) #21 AP2B1 (ENSLLEG00000014223) #22 RASL10B (ENSLLEG00000017561) #23 ENSLLEG00000017614 MMP28 (ENSLLEG00000017649) #26 ENSLLEG00000017731 #27 ENSLLEG00000017939 ENSLLEG00000018044 POR (ENSLLEG00000018178) TMEM120A (ENSLLEG00000018475) ENSLLEG00000018599 MDH2 (ENSLLEG00000018761) ENSLLEG00000019151 ENSLLEG00000019299 ENSLLEG00000019381 ENSLLEG00000019433 SRRM3 (ENSLLEG00000019981) Frog MODERN SPECIES 2 tbx4 (ENSXETG00000010718) tbx2 (ENSXETG00000020557) bcas3 (ENSXETG00000020553) ppm1d (ENSXETG00000039122) appbp2 (ENSXETG00000013509) usp32 (ENSXETG00000013503) ca4.2 (ENSXETG00000034545) ca4.2 (ENSXETG00000013489) nle1 (ENSXETG00000013488) #11 ulk2 (ENSXETG00000032595) aldh3a2 (ENSXETG00000013484) ENSXETG00000042714 ENSXETG00000039254 unc45b (ENSXETG00000013482) #12 pex12 (ENSXETG00000013481) #21 ap2b1 (ENSXETG00000013480) #22 rasl10b (ENSXETG00000040968) #23 gas2l2 (ENSXETG00000037269) mmp28 (ENSXETG00000013462) #26 taf15 (ENSXETG00000013477) #27 rhbdd2 (ENSXETG00000003427) por (ENSXETG00000008983) tmem120a (ENSXETG00000008980) styxl1 (ENSXETG00000008978) mdh2 (ENSXETG00000008976) acy3 (ENSXETG00000008975) srrm3 (ENSXETG00000031838) ENSXETG00000037033 hspb1 (ENSXETG00000008972) ywhag (ENSXETG00000008971) ssc4d (ENSXETG00000031843)