Amniota	ANCESTRAL SPECIES		ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Mammalia	ANCESTRAL SPECIES		ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Theria	ANCESTRAL SPECIES	1	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00550000076318	ENSGT00940000165160 #14	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Eutheria	ANCESTRAL SPECIES	5	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00550000076318	ENSGT00940000165160 #14	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000162109.C	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000183970	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00950000183970	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00950000184153	ENSGT00950000183791	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00950000183533	ENSGT01090000261056	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Primates	ANCESTRAL SPECIES	1	ENSGT00950000183970	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00950000184153	ENSGT00950000183791	ENSGT00950000183372	ENSGT00950000183533	ENSGT00950000186539	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000165160 #14	ENSGT00530000065184 #15	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00940000159077	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070.b #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a.k #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Mas night monkey	MODERN SPECIES	1376	RWDD2B (ENSANAG00000033045) #7	ENSANAG00000025174 #8	CCT8 (ENSANAG00000020085) #9	ENSANAG00000029900 #10	BACH1 (ENSANAG00000005567) #11	GRIK1 (ENSANAG00000033617) #12	CLDN17 (ENSANAG00000020019) #13	KRTAP19-5 (ENSANAG00000024336) #14	KRTAP22-2 (ENSANAG00000023310) #15	KRTAP22-1 (ENSANAG00000038159) #16	ENSANAG00000027319 #17	ENSANAG00000001699 #18	KRTAP8-1 (ENSANAG00000020056) #19	TIAM1 (ENSANAG00000032940) #20	ENSANAG00000038324 #21	SOD1 (ENSANAG00000038236) #22	SCAF4 (ENSANAG00000037494) #23	ENSANAG00000018665 #24	MIS18A (ENSANAG00000030442) #25	MRAP (ENSANAG00000029561) #26	URB1 (ENSANAG00000024617) #27	EVA1C (ENSANAG00000020771) #28	CFAP298 (ENSANAG00000027049) #29	SYNJ1 (ENSANAG00000027325) #30	PAXBP1 (ENSANAG00000033120) #31	C21orf62 (ENSANAG00000027350) #32	OLIG1 (ENSANAG00000019991) #33	IFNAR2 (ENSANAG00000021497) #34	IL10RB (ENSANAG00000022122) #35	IFNAR1 (ENSANAG00000031070) #36	IFNGR2 (ENSANAG00000037994) #37
Cebidae	ANCESTRAL SPECIES	32	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073.a	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070.b #24	ENSGT00940000161070.a ##24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a.k #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Marmoset	MODERN SPECIES	13	BACH1 (ENSCJAG00000008651) #11	GRIK1 (ENSCJAG00000008672) #12	CLDN8 (ENSCJAG00000022699)	ENSCJAG00000086833	KRTAP24-1 (ENSCJAG00000043903)	KRTAP26-1 (ENSCJAG00000038290)	ENSCJAG00000075622	KRTAP13-4 (ENSCJAG00000008784)	KRTAP19-3 (ENSCJAG00000038921)	ENSCJAG00000080831	KRTAP19-6 (ENSCJAG00000086841)	KRTAP20-1 (ENSCJAG00000043708)	ENSCJAG00000076983	KRTAP11-1 (ENSCJAG00000022606)	TIAM1 (ENSCJAG00000008881) #20	SOD1 (ENSCJAG00000008983) #22	SCAF4 (ENSCJAG00000008993) #23	HUNK (ENSCJAG00000045743) ##24	ENSCJAG00000009090 #25	ENSCJAG00000081135	MRAP (ENSCJAG00000009105) #26	URB1 (ENSCJAG00000009118) #27	EVA1C (ENSCJAG00000009130) #28	CFAP298 (ENSCJAG00000009160) #29	SYNJ1 (ENSCJAG00000009187) #30	PAXBP1 (ENSCJAG00000009330) #31	C21orf62 (ENSCJAG00000009437) #32	OLIG2 (ENSCJAG00000040469)	ENSCJAG00000082886	ENSCJAG00000077424	IFNAR2 (ENSCJAG00000000059) #34
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073.a	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070.b #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a.k #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	66	LTN1 (ENSSBOG00000032302)	RWDD2B (ENSSBOG00000023882) #7	ENSSBOG00000031081 #8	CCT8 (ENSSBOG00000031141) #9	ENSSBOG00000021433 #10	BACH1 (ENSSBOG00000021370) #11	GRIK1 (ENSSBOG00000025473) #12	CLDN17 (ENSSBOG00000020255) #13	KRTAP19-5 (ENSSBOG00000029975) #14	KRTAP22-1 (ENSSBOG00000035202) #16	KRTAP6-2 (ENSSBOG00000029938)	KRTAP21-3 (ENSSBOG00000028141)	KRTAP21-2 (ENSSBOG00000024800)	KRTAP21-1 (ENSSBOG00000035571)	TIAM1 (ENSSBOG00000023093) #20	ENSSBOG00000035760 #22	SCAF4 (ENSSBOG00000024068) #23	HUNK (ENSSBOG00000026563) #24	MIS18A (ENSSBOG00000033176) #25	MRAP (ENSSBOG00000029482) #26	URB1 (ENSSBOG00000027672) #27	EVA1C (ENSSBOG00000028646) #28	CFAP298 (ENSSBOG00000019656) #29	SYNJ1 (ENSSBOG00000021001) #30	PAXBP1 (ENSSBOG00000030172) #31	C21orf62 (ENSSBOG00000021330) #32	ENSSBOG00000016676	OLIG2 (ENSSBOG00000033043)	OLIG1 (ENSSBOG00000023447) #33	IFNAR2 (ENSSBOG00000031096) #34	ENSSBOG00000018437
Bolivian squirrel monkey	MODERN SPECIES	58	ENSSBOG00000005717	TSHZ1 (ENSSBOG00000017309)	PTGR3 (ENSSBOG00000035548)	ZNF407 (ENSSBOG00000025007)	CNDP1 (ENSSBOG00000020895)	CNDP2 (ENSSBOG00000027831)	DIPK1C (ENSSBOG00000024590)	C18orf63 (ENSSBOG00000027206)	CYB5A (ENSSBOG00000006601)	TIMM21 (ENSSBOG00000034325)	FBXO15 (ENSSBOG00000035966)	ENSSBOG00000026756	ENSSBOG00000033127	NETO1 (ENSSBOG00000035887)	CBLN2 (ENSSBOG00000019328)	ENSSBOG00000024747 #22	ENSSBOG00000010853	SOCS6 (ENSSBOG00000020065)	RTTN (ENSSBOG00000006589)	ENSSBOG00000024700	CD226 (ENSSBOG00000032857)	DOK6 (ENSSBOG00000025872)	ENSSBOG00000028203	TMX3 (ENSSBOG00000032998)	DSEL (ENSSBOG00000014071)	CDH19 (ENSSBOG00000033631)	CDH7 (ENSSBOG00000023446)	SERPINB8 (ENSSBOG00000026962)	HMSD (ENSSBOG00000022952)	SERPINB10 (ENSSBOG00000026076)	SERPINB2 (ENSSBOG00000028920)
Capuchin	MODERN SPECIES	619													ENSCCAG00000035782	TIAM1 (ENSCCAG00000036707) #20	ENSCCAG00000029290	SOD1 (ENSCCAG00000034174) #22	SCAF4 (ENSCCAG00000033727) #23
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Rhinopithecus	ANCESTRAL SPECIES	70									ENSGT01100000263699	ENSGT00950000183416	ENSGT00950000183372	ENSGT01000000215755	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Black snub-nosed monkey	MODERN SPECIES	741													ENSRBIG00000014035 #14	ENSRBIG00000039717	TIAM1 (ENSRBIG00000033361) #20	SOD1 (ENSRBIG00000029804) #22	SCAF4 (ENSRBIG00000040007) #23	HUNK (ENSRBIG00000031500) #24	MIS18A (ENSRBIG00000038961) #25	MRAP (ENSRBIG00000040139) #26	URB1 (ENSRBIG00000033122) #27	EVA1C (ENSRBIG00000034927) #28	TCP10L (ENSRBIG00000033081)	CFAP298 (ENSRBIG00000026515) #29	SYNJ1 (ENSRBIG00000034477) #30	PAXBP1 (ENSRBIG00000041633) #31	C21orf62 (ENSRBIG00000029872) #32	OLIG2 (ENSRBIG00000044608)	OLIG1 (ENSRBIG00000025302) #33	IFNAR2 (ENSRBIG00000044541) #34	IL10RB (ENSRBIG00000034310) #35
Golden snub-nosed monkey	MODERN SPECIES	625										KRTAP6-2 (ENSRROG00000039280)	KRTAP6-1 (ENSRROG00000042039)	KRTAP20-4 (ENSRROG00000030765)	ENSRROG00000044768	TIAM1 (ENSRROG00000028697) #20	ENSRROG00000018104	SOD1 (ENSRROG00000044308) #22	SCAF4 (ENSRROG00000029488) #23	HUNK (ENSRROG00000037737) #24
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n.c	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00390000002365.x.d.c.b	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00550000076318	ENSGT00910000148238	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Macaca	ANCESTRAL SPECIES	3	ENSGT00390000002365.x.d.c.b	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00550000076318	ENSGT00910000148238	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00390000001157.A.a	ENSGT00730000111511.b	ENSGT00730000111511.a	ENSGT00730000111539	ENSGT00940000162756.n.c	ENSGT00940000162756.n.d	ENSGT00940000162756.m.b	ENSGT00940000162756.m.a	ENSGT00940000162109.A	ENSGT00730000111463	ENSGT00390000006922.m.b.b.b.b	ENSGT00940000156294 #20	ENSGT01100000263493.a.b.a.a.b.a.b.a.a	ENSGT01100000263539.b.a.a.a.b.b.b.a.a.a.a.b	ENSGT01100000263493.a.a.a.b.a.b.a.b.b.b	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158406.h #36	ENSGT00940000158231 #35
Rhesus	MODERN SPECIES	13	ENSMMUG00000059605	ENSMMUG00000054249	KRTAP27-1 (ENSMMUG00000050022)	ENSMMUG00000061111	ENSMMUG00000014971	ENSMMUG00000054122	KRTAP13-4 (ENSMMUG00000053840)	KRTAP15-1 (ENSMMUG00000051605)	KRTAP11-1 (ENSMMUG00000051158)	ENSMMUG00000057252	ENSMMUG00000056363	TIAM1 (ENSMMUG00000019571) #20	ENSMMUG00000051417	ENSMMUG00000049457	ENSMMUG00000064926	SOD1 (ENSMMUG00000001711) #22	SCAF4 (ENSMMUG00000001712) #23	HUNK (ENSMMUG00000012917) #24	MIS18A (ENSMMUG00000059707) #25	MRAP (ENSMMUG00000059677) #26	URB1 (ENSMMUG00000010295) #27	EVA1C (ENSMMUG00000048824) #28	CFAP298 (ENSMMUG00000010304) #29	SYNJ1 (ENSMMUG00000004624) #30	PAXBP1 (ENSMMUG00000043714) #31	C3H21orf62 (ENSMMUG00000012298) #32	OLIG2 (ENSMMUG00000017652)	IFNAR2 (ENSMMUG00000003956) #34	IFNAR1 (ENSMMUG00000003961) #36	IFNGR2 (ENSMMUG00000005508) #37	TMEM50B (ENSMMUG00000005509)
Crab-eating macaque	MODERN SPECIES	13	CLDN8 (ENSMFAG00000030251)	KRTAP24-1 (ENSMFAG00000050451)	ENSMFAG00000062742	ENSMFAG00000051583	ENSMFAG00000050984	ENSMFAG00000061919	KRTAP13-4 (ENSMFAG00000061177)	ENSMFAG00000044254	KRTAP11-1 (ENSMFAG00000060023)	ENSMFAG00000051140	TIAM1 (ENSMFAG00000002250) #20	ENSMFAG00000065247	ENSMFAG00000063674	ENSMFAG00000049480	SCAF4 (ENSMFAG00000037668) #23	SOD1 (ENSMFAG00000041240) #22	HUNK (ENSMFAG00000043007) #24	MIS18A (ENSMFAG00000033702) #25	MRAP (ENSMFAG00000000802) #26	URB1 (ENSMFAG00000034391) #27	EVA1C (ENSMFAG00000034125) #28	TCP10L (ENSMFAG00000045781)	CFAP298 (ENSMFAG00000037088) #29	SYNJ1 (ENSMFAG00000018883) #30	PAXBP1 (ENSMFAG00000002885) #31	C21orf62 (ENSMFAG00000036953) #32	ENSMFAG00000065085	OLIG2 (ENSMFAG00000048902)	IL10RB (ENSMFAG00000039570) #35	IFNAR1 (ENSMFAG00000043614) #36	IFNGR2 (ENSMFAG00000001717) #37
Pig-tailed macaque	MODERN SPECIES	503	CLDN8 (ENSMNEG00000037184)	KRTAP25-1 (ENSMNEG00000039095)	KRTAP19-3 (ENSMNEG00000030821)	KRTAP19-4 (ENSMNEG00000035158)	KRTAP19-5 (ENSMNEG00000017520) #14	ENSMNEG00000029709	ENSMNEG00000030789	KRTAP6-2 (ENSMNEG00000037108)	KRTAP6-1 (ENSMNEG00000043342)	ENSMNEG00000044081	KRTAP21-1 (ENSMNEG00000035289)	ENSMNEG00000041828	TIAM1 (ENSMNEG00000044871) #20	ENSMNEG00000044900	ENSMNEG00000040507	SOD1 (ENSMNEG00000007968) #22	SCAF4 (ENSMNEG00000032966) #23	HUNK (ENSMNEG00000044157) #24	MIS18A (ENSMNEG00000028369) #25	MRAP (ENSMNEG00000013893) #26	URB1 (ENSMNEG00000032981) #27	EVA1C (ENSMNEG00000035226) #28	TCP10L (ENSMNEG00000039234)	CFAP298 (ENSMNEG00000030779) #29	SYNJ1 (ENSMNEG00000040077) #30	ENSMNEG00000010802	PAXBP1 (ENSMNEG00000031929) #31	C21orf62 (ENSMNEG00000018708) #32	OLIG2 (ENSMNEG00000040394)	OLIG1 (ENSMNEG00000026267) #33	IFNAR2 (ENSMNEG00000041434) #34
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00390000005727.a.b.b.bb.b	ENSGT00390000002365.x.d.c.b	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00550000076318	ENSGT00910000148238	ENSGT00940000156294 #20	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Cercopithecinae_d	ANCESTRAL SPECIES	36									ENSGT00950000183416	ENSGT00950000183372	ENSGT01090000260341	ENSGT00390000015202	ENSGT00910000148238	ENSGT00940000156294 #20	ENSGT00940000155898.d	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Sooty mangabey	MODERN SPECIES	465								KRTAP6-2 (ENSCATG00000036799)	KRTAP6-1 (ENSCATG00000045292)	KRTAP21-1 (ENSCATG00000034414)	KRTAP7-1 (ENSCATG00000011966)	ENSCATG00000039770	ENSCATG00000042584	TIAM1 (ENSCATG00000015629) #20	ENSCATG00000040145	SOD1 (ENSCATG00000040821) #22	SCAF4 (ENSCATG00000030379) #23	HUNK (ENSCATG00000028680) #24	MIS18A (ENSCATG00000034951) #25	MRAP (ENSCATG00000042418) #26	URB1 (ENSCATG00000042630) #27	EVA1C (ENSCATG00000027012) #28	TCP10L (ENSCATG00000010454)	CFAP298 (ENSCATG00000037049) #29	SYNJ1 (ENSCATG00000033891) #30	ENSCATG00000016391	PAXBP1 (ENSCATG00000030287) #31	C21orf62 (ENSCATG00000043153) #32	OLIG2 (ENSCATG00000044610)	OLIG1 (ENSCATG00000018778) #33	IFNAR2 (ENSCATG00000018593) #34
Drill	MODERN SPECIES	998											KRTAP21-1 (ENSMLEG00000035329)	KRTAP7-1 (ENSMLEG00000003571)	ENSMLEG00000033272	TIAM1 (ENSMLEG00000033214) #20	ENSMLEG00000033917	SOD1 (ENSMLEG00000034867) #22	SCAF4 (ENSMLEG00000039674) #23	HUNK (ENSMLEG00000038042) #24	MIS18A (ENSMLEG00000038072) #25	MRAP (ENSMLEG00000033382) #26	URB1 (ENSMLEG00000041435) #27	EVA1C (ENSMLEG00000031085) #28	TCP10L (ENSMLEG00000032376)	CFAP298 (ENSMLEG00000028996) #29	SYNJ1 (ENSMLEG00000037029) #30	ENSMLEG00000025731	PAXBP1 (ENSMLEG00000033450) #31	C21orf62 (ENSMLEG00000034397) #32	OLIG2 (ENSMLEG00000006770)
Olive baboon	MODERN SPECIES	14	ENSPANG00000041586	KRTAP19-1 (ENSPANG00000049508)	KRTAP19-2 (ENSPANG00000051383)	ENSPANG00000041824 #14	ENSPANG00000036982 #14	KRTAP22-2 (ENSPANG00000047296) #15	KRTAP20-2 (ENSPANG00000046975)	ENSPANG00000045506	ENSPANG00000035982	KRTAP8-1 (ENSPANG00000038315) #19	KRTAP7-1 (ENSPANG00000035065)	KRTAP11-1 (ENSPANG00000051150)	ENSPANG00000006687	TIAM1 (ENSPANG00000016520) #20	SCAF4 (ENSPANG00000017332) #23	SOD1 (ENSPANG00000022109) #22	HUNK (ENSPANG00000022529) #24	MIS18A (ENSPANG00000019589) #25	MRAP (ENSPANG00000011261) #26	URB1 (ENSPANG00000021964) #27	EVA1C (ENSPANG00000015096) #28	TCP10L (ENSPANG00000021143)	CFAP298 (ENSPANG00000022530) #29	SYNJ1 (ENSPANG00000022531) #30	PAXBP1 (ENSPANG00000022535) #31	C21orf62 (ENSPANG00000017134) #32	ENSPANG00000047617	OLIG2 (ENSPANG00000040767)	IFNAR2 (ENSPANG00000022203) #34	IL10RB (ENSPANG00000021145) #35	IFNAR1 (ENSPANG00000007665) #36
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00550000076392	ENSGT00840000130947	ENSGT01090000260341	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Hominidae	ANCESTRAL SPECIES	25	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00950000184153	ENSGT00950000183791	ENSGT00530000065184 #15	ENSGT00550000076392	ENSGT00840000130947	ENSGT01090000260341	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00950000183372	ENSGT00950000183533	ENSGT01000000215755	ENSGT00550000076392	ENSGT00840000130947	ENSGT01090000260341	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00950000183372	ENSGT00950000183533	ENSGT01000000215755	ENSGT00950000186539	ENSGT00410000029383	ENSGT00550000076392	ENSGT00840000130947	ENSGT01090000260341	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Pan	ANCESTRAL SPECIES	27	ENSGT00860000134312 #16	ENSGT00950000183372	ENSGT00950000183533	ENSGT01000000215755	ENSGT00950000186539	ENSGT00410000029383	ENSGT00550000076392	ENSGT01090000260341	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000155050.c.b	ENSGT00940000156294 #20	ENSGT00390000009366.c.b	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00530000063927.a.a.n.b.b.b	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	12	KRTAP19-3 (ENSPPAG00000032888)	KRTAP19-5 (ENSPPAG00000032202) #14	KRTAP22-2 (ENSPPAG00000030023) #15	ENSPPAG00000030209	KRTAP6-2 (ENSPPAG00000032330)	KRTAP22-1 (ENSPPAG00000032266) #16	KRTAP6-1 (ENSPPAG00000032430)	KRTAP21-1 (ENSPPAG00000030330)	KRTAP8-1 (ENSPPAG00000032139) #19	KRTAP7-1 (ENSPPAG00000032653)	KRTAP11-1 (ENSPPAG00000032405)	KRTAP19-8 (ENSPPAG00000032522)	ENSPPAG00000030797	TIAM1 (ENSPPAG00000033381) #20	ENSPPAG00000026185	ENSPPAG00000027217 #22	SCAF4 (ENSPPAG00000028535) #23	HUNK (ENSPPAG00000032225) #24	MIS18A (ENSPPAG00000001292) #25	MRAP (ENSPPAG00000002893) #26	URB1 (ENSPPAG00000003423) #27	EVA1C (ENSPPAG00000005532) #28	TCP10L (ENSPPAG00000007355)	ENSPPAG00000009038 #29	SYNJ1 (ENSPPAG00000026784) #30	PAXBP1 (ENSPPAG00000034585) #31	ENSPPAG00000034697 #32	ENSPPAG00000034805	IFNAR2 (ENSPPAG00000035117) #34	IL10RB (ENSPPAG00000010535) #35	IFNAR1 (ENSPPAG00000014398) #36
Bonobo	MODERN SPECIES		ENSPPAG00000031548	ENSPPAG00000034254	MAP1LC3C (ENSPPAG00000026353)	ENSPPAG00000042191	BECN2 (ENSPPAG00000016547)	EXO1 (ENSPPAG00000038555)	WDR64 (ENSPPAG00000015349)	OPN3 (ENSPPAG00000034935)	KMO (ENSPPAG00000030870)	FH (ENSPPAG00000029968)	RGS7 (ENSPPAG00000031922)	GREM2 (ENSPPAG00000011100)	ENSPPAG00000029823	ENSPPAG00000041841	ENSPPAG00000036597	ENSPPAG00000025320 #22	ENSPPAG00000004891	ENSPPAG00000026720	ENSPPAG00000034197	ENSPPAG00000024258	ZP4 (ENSPPAG00000030466)	RYR2 (ENSPPAG00000043978)	MT1HL1 (ENSPPAG00000025438)	ENSPPAG00000030831	MTR (ENSPPAG00000001371)	ENSPPAG00000030376	ACTN2 (ENSPPAG00000032972)	HEATR1 (ENSPPAG00000036487)	ENSPPAG00000034870	ENSPPAG00000030182	EDARADD (ENSPPAG00000038427)
Chimpanzee	MODERN SPECIES	12	KRTAP6-2 (ENSPTRG00000031450)	KRTAP22-1 (ENSPTRG00000013838) #16	KRTAP6-1 (ENSPTRG00000013839)	KRTAP20-1 (ENSPTRG00000013840)	KRTAP20-4 (ENSPTRG00000031449)	KRTAP20-2 (ENSPTRG00000013841)	KRTAP20-3 (ENSPTRG00000048081)	KRTAP21-3 (ENSPTRG00000041998)	KRTAP21-1 (ENSPTRG00000013842)	KRTAP8-1 (ENSPTRG00000013843) #19	KRTAP7-1 (ENSPTRG00000052397)	KRTAP11-1 (ENSPTRG00000013844)	KRTAP19-8 (ENSPTRG00000031445)	ENSPTRG00000044292	TIAM1 (ENSPTRG00000013846) #20	SOD1 (ENSPTRG00000013847) #22	SCAF4 (ENSPTRG00000013848) #23	HUNK (ENSPTRG00000013849) #24	MIS18A (ENSPTRG00000013850) #25	MRAP (ENSPTRG00000013851) #26	URB1 (ENSPTRG00000013852) #27	EVA1C (ENSPTRG00000013854) #28	TCP10L (ENSPTRG00000013856)	CFAP298 (ENSPTRG00000013857) #29	SYNJ1 (ENSPTRG00000023787) #30	PAXBP1 (ENSPTRG00000013861) #31	C21H21orf62 (ENSPTRG00000013862) #32	ENSPTRG00000051353	ENSPTRG00000051983 #33	ENSPTRG00000049835	IFNAR2 (ENSPTRG00000013865) #34
Human	MODERN SPECIES	13	KRTAP6-2 (ENSG00000186930)	KRTAP22-1 (ENSG00000186924) #16	KRTAP6-1 (ENSG00000184724)	KRTAP20-1 (ENSG00000244624)	KRTAP20-4 (ENSG00000206105)	KRTAP20-2 (ENSG00000184032)	KRTAP20-3 (ENSG00000206104)	KRTAP21-3 (ENSG00000231068)	KRTAP21-2 (ENSG00000187026)	KRTAP21-1 (ENSG00000187005)	KRTAP8-1 (ENSG00000183640) #19	KRTAP7-1 (ENSG00000274749)	KRTAP11-1 (ENSG00000182591)	KRTAP19-8 (ENSG00000206102)	TIAM1 (ENSG00000156299) #20	SOD1 (ENSG00000142168) #22	SCAF4 (ENSG00000156304) #23	HUNK (ENSG00000142149) #24	MIS18A (ENSG00000159055) #25	MRAP (ENSG00000170262) #26	URB1 (ENSG00000142207) #27	CFAP298-TCP10L (ENSG00000265590)	EVA1C (ENSG00000166979) #28	TCP10L (ENSG00000242220)	CFAP298 (ENSG00000159079) #29	SYNJ1 (ENSG00000159082) #30	PAXBP1 (ENSG00000159086) #31	C21orf62 (ENSG00000205929) #32	OLIG2 (ENSG00000205927)	OLIG1 (ENSG00000184221) #33	IFNAR2 (ENSG00000159110) #34
Gorilla	MODERN SPECIES	12	KRTAP19-6 (ENSGGOG00000022042)	KRTAP19-7 (ENSGGOG00000001659)	KRTAP22-2 (ENSGGOG00000010140) #15	KRTAP6-3 (ENSGGOG00000044096)	KRTAP6-2 (ENSGGOG00000023791)	KRTAP22-1 (ENSGGOG00000043201) #16	KRTAP6-1 (ENSGGOG00000014909)	KRTAP20-1 (ENSGGOG00000023946)	KRTAP20-4 (ENSGGOG00000040267)	KRTAP20-3 (ENSGGOG00000038558)	KRTAP21-2 (ENSGGOG00000023357)	KRTAP8-1 (ENSGGOG00000026820) #19	KRTAP7-1 (ENSGGOG00000041734)	TIAM1 (ENSGGOG00000014747) #20	ENSGGOG00000024857	SOD1 (ENSGGOG00000015554) #22	SCAF4 (ENSGGOG00000015557) #23	HUNK (ENSGGOG00000016651) #24	MIS18A (ENSGGOG00000004831) #25	MRAP (ENSGGOG00000000284) #26	URB1 (ENSGGOG00000000285) #27	EVA1C (ENSGGOG00000005797) #28	TCP10L (ENSGGOG00000042620)	SYNJ1 (ENSGGOG00000015945) #30	PAXBP1 (ENSGGOG00000016944) #31	ENSGGOG00000009078 #32	IFNAR2 (ENSGGOG00000039376) #34	IL10RB (ENSGGOG00000012242) #35	IFNAR1 (ENSGGOG00000022174) #36	IFNGR2 (ENSGGOG00000007591) #37	TMEM50B (ENSGGOG00000034844)
Orangutan	MODERN SPECIES	12	KRTAP13-4 (ENSPPYG00000011334)	KRTAP19-1 (ENSPPYG00000011336)	KRTAP19-2 (ENSPPYG00000011337)	KRTAP19-5 (ENSPPYG00000011338) #14	KRTAP19-6 (ENSPPYG00000011339)	KRTAP19-7 (ENSPPYG00000031061)	KRTAP22-2 (ENSPPYG00000011341) #15	KRTAP20-1 (ENSPPYG00000011549)	KRTAP20-2 (ENSPPYG00000011345)	KRTAP21-3 (ENSPPYG00000011346)	KRTAP21-2 (ENSPPYG00000011347)	KRTAP8-1 (ENSPPYG00000011348) #19	KRTAP11-1 (ENSPPYG00000011349)	KRTAP19-8 (ENSPPYG00000037907)	TIAM1 (ENSPPYG00000011351) #20	SOD1 (ENSPPYG00000011354) #22	SCAF4 (ENSPPYG00000011355) #23	HUNK (ENSPPYG00000011356) #24	ENSPPYG00000011357 #25	MRAP (ENSPPYG00000011358) #26	URB1 (ENSPPYG00000011359) #27	EVA1C (ENSPPYG00000011361) #28	ENSPPYG00000011363	CFAP298 (ENSPPYG00000011364) #29	ENSPPYG00000011365 #30	ENSPPYG00000036409	PAXBP1 (ENSPPYG00000011366) #31	ENSPPYG00000011368 #32	OLIG2 (ENSPPYG00000011369)	OLIG1 (ENSPPYG00000011370) #33	IFNAR2 (ENSPPYG00000011372) #34
Gibbon	MODERN SPECIES	17	GRIK1 (ENSNLEG00000003377) #12	CLDN17 (ENSNLEG00000018494) #13	CLDN8 (ENSNLEG00000003418)	KRTAP26-1 (ENSNLEG00000033841)	KRTAP13-4 (ENSNLEG00000018503)	ENSNLEG00000018508	KRTAP6-1 (ENSNLEG00000029002)	KRTAP20-1 (ENSNLEG00000018510)	KRTAP20-2 (ENSNLEG00000003437)	KRTAP20-3 (ENSNLEG00000032887)	KRTAP21-1 (ENSNLEG00000003439)	KRTAP8-1 (ENSNLEG00000018512) #19	KRTAP7-1 (ENSNLEG00000018513)	TIAM1 (ENSNLEG00000003443) #20	ENSNLEG00000028524	SOD1 (ENSNLEG00000003545) #22	SCAF4 (ENSNLEG00000003569) #23	HUNK (ENSNLEG00000036238) #24	MIS18A (ENSNLEG00000003662) #25	MRAP (ENSNLEG00000003671) #26	URB1 (ENSNLEG00000026872) #27	EVA1C (ENSNLEG00000003679) #28	TCP10L (ENSNLEG00000031925)	CFAP298 (ENSNLEG00000030059) #29	ENSNLEG00000003734 #30	PAXBP1 (ENSNLEG00000003751) #31	ENSNLEG00000003819 #32	OLIG2 (ENSNLEG00000003822)	IFNAR2 (ENSNLEG00000003834) #34	IL10RB (ENSNLEG00000003835) #35	IFNAR1 (ENSNLEG00000003846) #36
Tarsier	MODERN SPECIES	1952															ENSTSYG00000027129	SOD1 (ENSTSYG00000036906) #22	SCAF4 (ENSTSYG00000011344) #23
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00730000111539	ENSGT00940000162756.n.g	ENSGT00940000162756.n.h	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00940000165160 #14	ENSGT00950000183416	ENSGT00950000183372	ENSGT00950000183533	ENSGT00950000186539	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00950000183564	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Mouse lemur	MODERN SPECIES	24	RWDD2B (ENSMICG00000034054) #7	USP16 (ENSMICG00000031747) #8	CCT8 (ENSMICG00000002601) #9	MAP3K7CL (ENSMICG00000038209) #10	BACH1 (ENSMICG00000030387) #11	GRIK1 (ENSMICG00000000648) #12	ENSMICG00000000669	ENSMICG00000047432	ENSMICG00000000670	KRTAP19-7 (ENSMICG00000031600)	KRTAP6-2 (ENSMICG00000034660)	KRTAP6-1 (ENSMICG00000034583)	KRTAP11-1 (ENSMICG00000010543)	KRTAP19-8 (ENSMICG00000044709)	TIAM1 (ENSMICG00000016829) #20	SOD1 (ENSMICG00000005253) #22	SCAF4 (ENSMICG00000005256) #23	HUNK (ENSMICG00000035191) #24	MIS18A (ENSMICG00000038925) #25	ENSMICG00000044157	URB1 (ENSMICG00000016424) #27	EVA1C (ENSMICG00000038077) #28	ENSMICG00000016456 #29	SYNJ1 (ENSMICG00000034953) #30	PAXBP1 (ENSMICG00000037481) #31	C21orf62 (ENSMICG00000045267) #32	OLIG2 (ENSMICG00000041942)	OLIG1 (ENSMICG00000028171) #33	IFNAR2 (ENSMICG00000044490) #34	IL10RB (ENSMICG00000006353) #35	IFNAR1 (ENSMICG00000006359) #36
Lemuriformes_a	ANCESTRAL SPECIES	60	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n.g	ENSGT00950000183791	ENSGT00950000183372	ENSGT00950000183533	ENSGT00950000186539	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Coquerels sifaka	DUPLICATION
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	134								GRIN3A (ENSPCOG00000008500)	RNF20 (ENSPCOG00000026072)	PGAP4 (ENSPCOG00000014025)	ALDOB (ENSPCOG00000026694)	ZNF189 (ENSPCOG00000016670)	BAAT (ENSPCOG00000015820)	PLPPR1 (ENSPCOG00000005256)	ENSPCOG00000028150 #22	ENSPCOG00000012244 #22	CAVIN4 (ENSPCOG00000012594)	TMEFF1 (ENSPCOG00000014294)	MSANTD3 (ENSPCOG00000028663)	TEX10 (ENSPCOG00000026793)	ENSPCOG00000022135	INVS (ENSPCOG00000024587)	ERP44 (ENSPCOG00000027107)	STX17 (ENSPCOG00000019872)	NR4A3 (ENSPCOG00000012688)	SEC61B (ENSPCOG00000021383)	ALG2 (ENSPCOG00000014203)	TGFBR1 (ENSPCOG00000021241)	COL15A1 (ENSPCOG00000007449)	GALNT12 (ENSPCOG00000022046)	ANKS6 (ENSPCOG00000019218)
Coquerels sifaka	MODERN SPECIES	134									GRIN3A (ENSPCOG00000008500)	RNF20 (ENSPCOG00000026072)	PGAP4 (ENSPCOG00000014025)	ALDOB (ENSPCOG00000026694)	ZNF189 (ENSPCOG00000016670)	BAAT (ENSPCOG00000015820)	PLPPR1 (ENSPCOG00000005256)	ENSPCOG00000028150 #22	ENSPCOG00000012244 #22	CAVIN4 (ENSPCOG00000012594)	TMEFF1 (ENSPCOG00000014294)	MSANTD3 (ENSPCOG00000028663)	TEX10 (ENSPCOG00000026793)	ENSPCOG00000022135	INVS (ENSPCOG00000024587)	ERP44 (ENSPCOG00000027107)	STX17 (ENSPCOG00000019872)	NR4A3 (ENSPCOG00000012688)	SEC61B (ENSPCOG00000021383)	ALG2 (ENSPCOG00000014203)	TGFBR1 (ENSPCOG00000021241)	COL15A1 (ENSPCOG00000007449)	GALNT12 (ENSPCOG00000022046)
Coquerels sifaka	MODERN SPECIES	697	RWDD2B (ENSPCOG00000028447) #7	USP16 (ENSPCOG00000015373) #8	CCT8 (ENSPCOG00000025167) #9	MAP3K7CL (ENSPCOG00000022793) #10	ENSPCOG00000021857	BACH1 (ENSPCOG00000022879) #11	GRIK1 (ENSPCOG00000025437) #12	ENSPCOG00000008176	ENSPCOG00000023297	ENSPCOG00000026332	ENSPCOG00000021232	KRTAP19-7 (ENSPCOG00000026533)	KRTAP6-1 (ENSPCOG00000020897)	KRTAP19-8 (ENSPCOG00000014486)	TIAM1 (ENSPCOG00000026538) #20	ENSPCOG00000019554 #22	SCAF4 (ENSPCOG00000018710) #23	ENSPCOG00000022163	HUNK (ENSPCOG00000007940) #24	MIS18A (ENSPCOG00000024896) #25	ENSPCOG00000014658	URB1 (ENSPCOG00000022695) #27	EVA1C (ENSPCOG00000024196) #28	CFAP298 (ENSPCOG00000027544) #29	SYNJ1 (ENSPCOG00000024841) #30	PAXBP1 (ENSPCOG00000028582) #31	C21orf62 (ENSPCOG00000015192) #32	OLIG2 (ENSPCOG00000026499)	OLIG1 (ENSPCOG00000012882) #33	ENSPCOG00000028653	ENSPCOG00000011549
Greater bamboo lemur	MODERN SPECIES	22	PPP1R11 (ENSPSMG00000010766)	ENSPSMG00000010758	ZFP57 (ENSPSMG00000010755)	MOG (ENSPSMG00000010712)	GABBR1 (ENSPSMG00000010212)	OR2H2 (ENSPSMG00000009986)	UBD (ENSPSMG00000009976)	KRTAP6-1 (ENSPSMG00000009968)	KRTAP20-1 (ENSPSMG00000009957)	KRTAP20-2 (ENSPSMG00000009950)	ENSPSMG00000009935	KRTAP8-1 (ENSPSMG00000009928) #19	KRTAP7-1 (ENSPSMG00000009924)	KRTAP11-1 (ENSPSMG00000009919)	TIAM1 (ENSPSMG00000009838) #20	SOD1 (ENSPSMG00000009679) #22	SCAF4 (ENSPSMG00000009574) #23	HUNK (ENSPSMG00000009503) #24	ENSPSMG00000009496	MIS18A (ENSPSMG00000009489) #25	MRAP (ENSPSMG00000009480) #26	URB1 (ENSPSMG00000009456) #27	EVA1C (ENSPSMG00000009373) #28	CFAP298 (ENSPSMG00000009317) #29	SYNJ1 (ENSPSMG00000008973) #30	PAXBP1 (ENSPSMG00000008546) #31	C21orf62 (ENSPSMG00000008496) #32	OLIG2 (ENSPSMG00000008484)	OLIG1 (ENSPSMG00000008478) #33
Bushbaby	DUPLICATION
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	226	CLDN17 (ENSOGAG00000003639) #13	CLDN8 (ENSOGAG00000003643)	KRTAP27-1 (ENSOGAG00000003652)	ENSOGAG00000003655	ENSOGAG00000026011	ENSOGAG00000003669	ENSOGAG00000007031	ENSOGAG00000003429	ENSOGAG00000003432	ENSOGAG00000016316	KRTAP8-1 (ENSOGAG00000030140) #19	KRTAP7-1 (ENSOGAG00000026158)	KRTAP11-1 (ENSOGAG00000016317)	TIAM1 (ENSOGAG00000004005) #20	ENSOGAG00000029301	ENSOGAG00000014646 #22	SCAF4 (ENSOGAG00000014653) #23	ENSOGAG00000033329	HUNK (ENSOGAG00000010230) #24	MIS18A (ENSOGAG00000017137) #25	MRAP (ENSOGAG00000017139) #26	URB1 (ENSOGAG00000017140) #27	EVA1C (ENSOGAG00000009260) #28	CFAP298 (ENSOGAG00000006008) #29	SYNJ1 (ENSOGAG00000006010) #30	PAXBP1 (ENSOGAG00000003344) #31	C21orf62 (ENSOGAG00000027318) #32	ENSOGAG00000032768	OLIG2 (ENSOGAG00000026818)	OLIG1 (ENSOGAG00000033584) #33	ENSOGAG00000027625
Bushbaby	MODERN SPECIES	125	LRRC8D (ENSOGAG00000033080)	LRRC8C (ENSOGAG00000005172)	ENSOGAG00000026324	LRRC8B (ENSOGAG00000032246)	ENSOGAG00000015856	ENSOGAG00000003899	GBP5 (ENSOGAG00000015863)	ENSOGAG00000031656	ENSOGAG00000031422	ENSOGAG00000004493	GBP7 (ENSOGAG00000002535)	ENSOGAG00000005755	KYAT3 (ENSOGAG00000014512)	GTF2B (ENSOGAG00000005753)	PKN2 (ENSOGAG00000005748)	ENSOGAG00000030868 #22	LMO4 (ENSOGAG00000002297)	HS2ST1 (ENSOGAG00000026296)	SH3GLB1 (ENSOGAG00000009494)	ENSOGAG00000014165	CLCA4 (ENSOGAG00000014158)	CLCA1 (ENSOGAG00000014152)	CLCA2 (ENSOGAG00000014147)	ODF2L (ENSOGAG00000014145)	COL24A1 (ENSOGAG00000010965)	ZNHIT6 (ENSOGAG00000010963)	CCN1 (ENSOGAG00000010959)	ENSOGAG00000033406	DDAH1 (ENSOGAG00000009978)	BCL10 (ENSOGAG00000009976)	C1orf52 (ENSOGAG00000008908)
Bushbaby	MODERN SPECIES	129	ENSOGAG00000025830	ENSOGAG00000033971	NIPSNAP3A (ENSOGAG00000009111)	NIPSNAP3B (ENSOGAG00000009112)	ABCA1 (ENSOGAG00000009117)	SLC44A1 (ENSOGAG00000005531)	FSD1L (ENSOGAG00000029141)	FKTN (ENSOGAG00000024071)	TAL2 (ENSOGAG00000009225)	TMEM38B (ENSOGAG00000033320)	ZNF462 (ENSOGAG00000001625)	RAD23B (ENSOGAG00000014216)	ENSOGAG00000024651	ENSOGAG00000025236	KLF4 (ENSOGAG00000029918)	ENSOGAG00000024789 #22	ACTL7B (ENSOGAG00000009063)	ACTL7A (ENSOGAG00000009064)	ELP1 (ENSOGAG00000009065)	ABITRAM (ENSOGAG00000024317)	CTNNAL1 (ENSOGAG00000009072)	TMEM245 (ENSOGAG00000009075)	FRRS1L (ENSOGAG00000026708)	EPB41L4B (ENSOGAG00000005508)	PTPN3 (ENSOGAG00000016018)	ENSOGAG00000034039	ENSOGAG00000025160	PALM2AKAP2 (ENSOGAG00000009157)	C9orf152 (ENSOGAG00000009164)	ENSOGAG00000009165	SVEP1 (ENSOGAG00000011809)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT00940000165160 #14	ENSGT00950000184153	ENSGT01100000263699	ENSGT00950000183533	ENSGT01090000261056	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Tree shrew	MODERN SPECIES	2054																SOD1 (ENSTBEG00000007333) #22	SCAF4 (ENSTBEG00000007909) #23
Glires	ANCESTRAL SPECIES	2	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT00940000165160 #14	ENSGT00950000184153	ENSGT01100000263699	ENSGT00950000183533	ENSGT01090000261056	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Lagomorpha	ANCESTRAL SPECIES	151							ENSGT00940000162756.n.m	ENSGT00940000162109.A	ENSGT00940000165160 #14	ENSGT00950000184153	ENSGT01100000263699	ENSGT00950000183533	ENSGT01090000261056	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000162722 #33
Rabbit	MODERN SPECIES	5	ENSOCUG00000034969	ENSOCUG00000029061	KRTAP19-6 (ENSOCUG00000031197)	ENSOCUG00000021824	ENSOCUG00000021503	ENSOCUG00000023756	ENSOCUG00000027077	KRTAP6-1 (ENSOCUG00000027870)	KAP6.1.1 (ENSOCUG00000017166)	ENSOCUG00000026444	ENSOCUG00000025507	KRTAP20-1 (ENSOCUG00000035121)	ENSOCUG00000029067	KRTAP11-1 (ENSOCUG00000012040)	TIAM1 (ENSOCUG00000016524) #20	SOD1 (ENSOCUG00000024552) #22	SCAF4 (ENSOCUG00000008336) #23	HUNK (ENSOCUG00000005096) #24	ENSOCUG00000034657	MIS18A (ENSOCUG00000009379) #25	MRAP (ENSOCUG00000021276) #26	URB1 (ENSOCUG00000009381) #27	ENSOCUG00000012278	CFAP298 (ENSOCUG00000000461) #29	SYNJ1 (ENSOCUG00000001420) #30	C21orf62 (ENSOCUG00000007160) #32	OLIG1 (ENSOCUG00000027389) #33	PLCXD1 (ENSOCUG00000025223)	GTPBP6 (ENSOCUG00000008245)	ENSOCUG00000017611	ENSOCUG00000028055
Pika	MODERN SPECIES	1760																SOD1 (ENSOPRG00000007008) #22	SCAF4 (ENSOPRG00000007016) #23
Rodentia	ANCESTRAL SPECIES	2	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000162756.m.b	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT00940000165160 #14	ENSGT00860000135369	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00900000143330	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000136057	ENSGT00860000135680	ENSGT00900000143411	ENSGT00860000135369	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00900000143330	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Kangaroo rat	MODERN SPECIES	321							Actr10 (ENSDORG00000008332)	ENSDORG00000002167	Arid4a (ENSDORG00000002170)	Timm9 (ENSDORG00000028490)	ENSDORG00000024020	Daam1 (ENSDORG00000009794)	Gpr135 (ENSDORG00000023535)	L3hypdh (ENSDORG00000004259)	ENSDORG00000004260	ENSDORG00000024605 #22	Rtn1 (ENSDORG00000008249)	Lrrc9 (ENSDORG00000005872)	Pcnx4 (ENSDORG00000004066)	Ppm1a (ENSDORG00000007776)	ENSDORG00000026413	Six6 (ENSDORG00000007182)	Six1 (ENSDORG00000013889)	Six4 (ENSDORG00000023692)	Mnat1 (ENSDORG00000015553)	Trmt5 (ENSDORG00000015555)	Slc38a6 (ENSDORG00000015558)	Tmem30b (ENSDORG00000024610)	Prkch (ENSDORG00000015119)	ENSDORG00000030222	ENSDORG00000004304
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000136057	ENSGT00860000135680	ENSGT00900000143411	ENSGT00860000135369	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Muroidea	ANCESTRAL SPECIES	11	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000136057	ENSGT00860000135680	ENSGT00900000143411	ENSGT00860000135369	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00940000162756.n	ENSGT00940000161951.i.a.b	ENSGT00940000161951.i.a.a	ENSGT00940000161951.j	ENSGT00940000162109.A	ENSGT00860000136057	ENSGT01100000265236	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00940000161951.i.a.b	ENSGT00940000161951.i.a.a.f.b	ENSGT00900000142979	ENSGT00940000162109.A	ENSGT01100000265236	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00730000111539	ENSGT00940000162756.n	ENSGT00940000161951.i.a.b	ENSGT00940000161951.i.a.a.f.a	ENSGT00940000161951.j	ENSGT00940000161951.i.a.a.f.b	ENSGT00900000142979	ENSGT00940000162109.A	ENSGT00860000136185	ENSGT01100000263699.d	ENSGT01100000265236	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Golden Hamster	MODERN SPECIES	659	Krtap15 (ENSMAUG00000017327)	ENSMAUG00000017077	ENSMAUG00000004914	Krtap22-2 (ENSMAUG00000014084)	ENSMAUG00000011500	ENSMAUG00000017214	ENSMAUG00000017193	ENSMAUG00000003675	ENSMAUG00000011859	ENSMAUG00000017866	ENSMAUG00000008840	Krtap8-1 (ENSMAUG00000016995) #19	Krtap7-1 (ENSMAUG00000016949)	Krtap11-1 (ENSMAUG00000016989)	Tiam1 (ENSMAUG00000010458) #20	Sod1 (ENSMAUG00000018610) #22	Scaf4 (ENSMAUG00000013307) #23	Hunk (ENSMAUG00000018207) #24	Mis18a (ENSMAUG00000018093) #25	Urb1 (ENSMAUG00000010516) #27	ENSMAUG00000018958	Cfap298 (ENSMAUG00000013919) #29	Synj1 (ENSMAUG00000009743) #30	Paxbp1 (ENSMAUG00000016303) #31	Olig2 (ENSMAUG00000012198)	Ifnar1 (ENSMAUG00000014001) #36	Tmem50b (ENSMAUG00000013494)	Dnajc28 (ENSMAUG00000000595)	Gart (ENSMAUG00000010349)	ENSMAUG00000002086	Donson (ENSMAUG00000007860)
Chinese hamster chok1gshd	MODERN SPECIES	382	ENSCGRG00001007714	ENSCGRG00001009431	ENSCGRG00001009731	ENSCGRG00001009720	ENSCGRG00001010208	ENSCGRG00001007314	ENSCGRG00001005854	ENSCGRG00001006278	ENSCGRG00001007463	ENSCGRG00001008669	Krtap8-1 (ENSCGRG00001008756) #19	Krtap7-1 (ENSCGRG00001009623)	Krtap11-1 (ENSCGRG00001009257)	Tiam1 (ENSCGRG00001020201) #20	ENSCGRG00001012442	Sod1 (ENSCGRG00001016856) #22	Scaf4 (ENSCGRG00001020821) #23	Hunk (ENSCGRG00001022573) #24	Mis18a (ENSCGRG00001019433) #25	Mrap (ENSCGRG00001019659) #26	Urb1 (ENSCGRG00001010616) #27	Eva1c (ENSCGRG00001000509) #28	Cfap298 (ENSCGRG00001014106) #29	Synj1 (ENSCGRG00001010861) #30	Paxbp1 (ENSCGRG00001016774) #31	4932438H23Rik (ENSCGRG00001007100) #32	Olig2 (ENSCGRG00001011054)	Olig1 (ENSCGRG00001008262) #33	Ifnar2 (ENSCGRG00001004301) #34	Il10rb (ENSCGRG00001022614) #35	Ifnar1 (ENSCGRG00001021139) #36
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000161951.i.a.a.e	ENSGT00940000161951.j	ENSGT00940000162109.A	ENSGT00860000135369	ENSGT00950000184125	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Prairie vole	MODERN SPECIES	7	ENSMOCG00000004918	ENSMOCG00000015235	ENSMOCG00000001109	ENSMOCG00000017797	ENSMOCG00000018669	ENSMOCG00000018304	ENSMOCG00000004811	Krtap20-2 (ENSMOCG00000005116)	ENSMOCG00000012121	ENSMOCG00000015260	ENSMOCG00000009864	Krtap8-1 (ENSMOCG00000010207) #19	Krtap7-1 (ENSMOCG00000010099)	Krtap11-1 (ENSMOCG00000022551)	Tiam1 (ENSMOCG00000001035) #20	Sod1 (ENSMOCG00000017826) #22	Scaf4 (ENSMOCG00000012087) #23	ENSMOCG00000018989	Hunk (ENSMOCG00000018032) #24	ENSMOCG00000010043	Mis18a (ENSMOCG00000004034) #25	Mrap (ENSMOCG00000013959) #26	Urb1 (ENSMOCG00000012613) #27	ENSMOCG00000021515	Cfap298 (ENSMOCG00000008204) #29	ENSMOCG00000017781
Northern American deer mouse	MODERN SPECIES	3	ENSPEMG00000026175	Krtap14 (ENSPEMG00000007683)	Krtap15 (ENSPEMG00000029447)	Krtap19-5 (ENSPEMG00000000821)	ENSPEMG00000002531	ENSPEMG00000015256	Krtap6-3 (ENSPEMG00000029501)	Gm9789 (ENSPEMG00000001179)	ENSPEMG00000001108	Krtap21-1 (ENSPEMG00000015124)	Krtap6-2 (ENSPEMG00000026094)	Krtap8-1 (ENSPEMG00000005025) #19	Krtap7-1 (ENSPEMG00000008552)	Krtap11-1 (ENSPEMG00000011198)	Tiam1 (ENSPEMG00000021217) #20	Sod1 (ENSPEMG00000011131) #22	Scaf4 (ENSPEMG00000026699) #23	Hunk (ENSPEMG00000005678) #24	Mrap (ENSPEMG00000030895) #26	Urb1 (ENSPEMG00000021205) #27	Eva1c (ENSPEMG00000022619) #28	Cfap298 (ENSPEMG00000021301) #29	Synj1 (ENSPEMG00000018767) #30	Paxbp1 (ENSPEMG00000022281) #31	4932438H23Rik (ENSPEMG00000022455) #32	Olig2 (ENSPEMG00000031029)	Olig1 (ENSPEMG00000005834) #33	Ifnar2 (ENSPEMG00000023185) #34	Il10rb (ENSPEMG00000022622) #35	ENSPEMG00000022113 #36	Ifngr2 (ENSPEMG00000000708) #37
Murinae	ANCESTRAL SPECIES	13	ENSGT00940000162756.n	ENSGT00940000161951.i.a.b	ENSGT00940000161951.i.a.a	ENSGT00940000161951.j	ENSGT00940000162109.A	ENSGT00900000143341	ENSGT00860000136057	ENSGT00860000136023	ENSGT01100000264431	ENSGT01100000264602	ENSGT01100000264006	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Mus	ANCESTRAL SPECIES	13	ENSGT00860000136023	ENSGT00860000135680	ENSGT00900000143411	ENSGT00860000136185	ENSGT01100000263882.b	ENSGT01100000263882.a.b	ENSGT01100000264006	ENSGT01100000264431	ENSGT00950000184524	ENSGT00860000135369	ENSGT00950000184125	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00860000136264	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231.d #35
Mus_A	ANCESTRAL SPECIES	18	ENSGT00860000135680	ENSGT00900000143411	ENSGT00860000136185	ENSGT00920000149427.c.b.c.b.b	ENSGT01100000263882.b	ENSGT01100000263882.a.b	ENSGT01100000264006	ENSGT01100000264431	ENSGT00950000184524	ENSGT00860000135369	ENSGT00950000184125	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00860000136264	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231.d #35
Mus_B	DUPLICATION
Mus_B	ANCESTRAL SPECIES	18	ENSGT00860000136185	ENSGT00920000149427.c.b.c.b.a.a.a	ENSGT00920000149427.c.b.c.b.a.b	ENSGT00950000186541	ENSGT01100000263882.a.a.a	ENSGT01100000263882.a.b	ENSGT01100000264006	ENSGT01100000264431	ENSGT00950000184524	ENSGT00860000135369	ENSGT00950000184125	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.m #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00860000136264	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231.c #35
Mus_C	ANCESTRAL SPECIES	12	ENSGT00920000149427.c.b.c.a	ENSGT00920000149427.c.a.d	ENSGT00920000149427.c.b.c.b.a.a.b	ENSGT00950000186541	ENSGT01100000263882.a.a.a	ENSGT01100000263882.a.b	ENSGT01100000264006	ENSGT01100000264431	ENSGT00950000184524	ENSGT00860000135369	ENSGT00950000184125	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.m #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00860000136264	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231.d #35
spretus	MODERN SPECIES	7	MGP_SPRETEiJ_G0021834	MGP_SPRETEiJ_G0021835	MGP_SPRETEiJ_G0021836	MGP_SPRETEiJ_G0021837	Krtap6-3 (MGP_SPRETEiJ_G0021838)	Gm6358 (MGP_SPRETEiJ_G0021839)	Gm9789 (MGP_SPRETEiJ_G0021840)	Gm7735 (MGP_SPRETEiJ_G0021841)	MGP_SPRETEiJ_G0021842	MGP_SPRETEiJ_G0021843	MGP_SPRETEiJ_G0021844	Krtap8-1 (MGP_SPRETEiJ_G0021845) #19	Krtap7-1 (MGP_SPRETEiJ_G0021846)	Krtap11-1 (MGP_SPRETEiJ_G0021847)	Tiam1 (MGP_SPRETEiJ_G0021848) #20	Sod1 (MGP_SPRETEiJ_G0021849) #22	Scaf4 (MGP_SPRETEiJ_G0021850) #23	Hunk (MGP_SPRETEiJ_G0021851) #24	Mis18a (MGP_SPRETEiJ_G0021852) #25	Mrap (MGP_SPRETEiJ_G0021853) #26	Urb1 (MGP_SPRETEiJ_G0021854) #27	Cfap298 (MGP_SPRETEiJ_G0021856) #29	Synj1 (MGP_SPRETEiJ_G0021857) #30	Paxbp1 (MGP_SPRETEiJ_G0021858) #31	4932438H23Rik (MGP_SPRETEiJ_G0021859) #32	MGP_SPRETEiJ_G0021860	Olig2 (MGP_SPRETEiJ_G0021861)	Olig1 (MGP_SPRETEiJ_G0021862) #33	Ifnar2 (MGP_SPRETEiJ_G0021863) #34	MGP_SPRETEiJ_G0021864 #35	MGP_SPRETEiJ_G0021865
Steppe mouse	MODERN SPECIES	2863																Sod1 (ENSMSIG00000017767) #22	Scaf4 (ENSMSIG00000017298) #23	Hunk (ENSMSIG00000017218) #24	Mis18a (ENSMSIG00000017195) #25	Mrap (ENSMSIG00000017183) #26	Urb1 (ENSMSIG00000017152) #27	Eva1c (ENSMSIG00000016689) #28	ENSMSIG00000016647 #29	Synj1 (ENSMSIG00000016178) #30	Paxbp1 (ENSMSIG00000016135) #31	4932438H23Rik (ENSMSIG00000016127) #32	Olig2 (ENSMSIG00000016105)	Olig1 (ENSMSIG00000016095) #33	Ifnar2 (ENSMSIG00000016067) #34	Il10rb (ENSMSIG00000016038) #35
Mouse	MODERN SPECIES	7	Krtap6-5 (ENSMUSG00000062400)	1110025L11Rik (ENSMUSG00000068073)	Krtap6-3 (ENSMUSG00000057855)	Gm6358 (ENSMUSG00000068071)	Gm10061 (ENSMUSG00000059113)	Gm9789 (ENSMUSG00000044227)	Gm7735 (ENSMUSG00000068068)	1110057P08Rik (ENSMUSG00000068067)	Krtap20-2 (ENSMUSG00000091039)	Krtap21-1 (ENSMUSG00000058368)	Krtap6-2 (ENSMUSG00000062433)	Krtap8-1 (ENSMUSG00000059632) #19	Krtap7-1 (ENSMUSG00000056706)	Krtap11-1 (ENSMUSG00000091212)	Tiam1 (ENSMUSG00000002489) #20	Sod1 (ENSMUSG00000022982) #22	Scaf4 (ENSMUSG00000022983) #23	Hunk (ENSMUSG00000053414) #24	Mis18a (ENSMUSG00000022978) #25	Mrap (ENSMUSG00000039956) #26	Urb1 (ENSMUSG00000039929) #27	Eva1c (ENSMUSG00000039903) #28	Cfap298 (ENSMUSG00000022972) #29	Synj1 (ENSMUSG00000022973) #30	Paxbp1 (ENSMUSG00000022974) #31	4932438H23Rik (ENSMUSG00000039851) #32	Olig2 (ENSMUSG00000039830)	Olig1 (ENSMUSG00000046160) #33	Ifnar2 (ENSMUSG00000022971) #34	Gm21970 (ENSMUSG00000093701)	Il10rb (ENSMUSG00000022969) #35
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000155551.n #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00940000155551.n #22
Steppe mouse	MODERN SPECIES	2536														Gng12 (ENSMSIG00000023111)	Gadd45a (ENSMSIG00000023082)	ENSMSIG00000023072 #22	Serbp1 (ENSMSIG00000022810)	Il12rb2 (ENSMSIG00000022681)	ENSMSIG00000022647	Tacstd2 (ENSMSIG00000022639)
Ryukyu mouse	MODERN SPECIES	7	MGP_CAROLIEiJ_G0020928	MGP_CAROLIEiJ_G0020929	MGP_CAROLIEiJ_G0020930	MGP_CAROLIEiJ_G0020931	MGP_CAROLIEiJ_G0020932	Gm10061 (MGP_CAROLIEiJ_G0020933)	Gm9789 (MGP_CAROLIEiJ_G0020934)	Gm7735 (MGP_CAROLIEiJ_G0020935)	MGP_CAROLIEiJ_G0020936	Krtap21-1 (MGP_CAROLIEiJ_G0020937)	Krtap6-2 (MGP_CAROLIEiJ_G0020938)	Krtap8-1 (MGP_CAROLIEiJ_G0020939) #19	Krtap7-1 (MGP_CAROLIEiJ_G0020940)	Krtap11-1 (MGP_CAROLIEiJ_G0020941)	Tiam1 (MGP_CAROLIEiJ_G0020942) #20	Sod1 (MGP_CAROLIEiJ_G0020943) #22	Scaf4 (MGP_CAROLIEiJ_G0020944) #23	Hunk (MGP_CAROLIEiJ_G0020945) #24	Mis18a (MGP_CAROLIEiJ_G0020946) #25	Mrap (MGP_CAROLIEiJ_G0020947) #26	Urb1 (MGP_CAROLIEiJ_G0020948) #27	Eva1c (MGP_CAROLIEiJ_G0020949) #28	Cfap298 (MGP_CAROLIEiJ_G0020950) #29	Synj1 (MGP_CAROLIEiJ_G0020951) #30	Paxbp1 (MGP_CAROLIEiJ_G0020952) #31	4932438H23Rik (MGP_CAROLIEiJ_G0020953) #32	MGP_CAROLIEiJ_G0020954	Olig2 (MGP_CAROLIEiJ_G0020955)	Olig1 (MGP_CAROLIEiJ_G0020956) #33	Ifnar2 (MGP_CAROLIEiJ_G0020957) #34	MGP_CAROLIEiJ_G0020958 #35
Shrew mouse	MODERN SPECIES	3	MGP_PahariEiJ_G0016633	MGP_PahariEiJ_G0016634	MGP_PahariEiJ_G0016635	Krtap6-3 (MGP_PahariEiJ_G0016636)	MGP_PahariEiJ_G0016637	Gm10061 (MGP_PahariEiJ_G0016638)	MGP_PahariEiJ_G0016639	Gm7735 (MGP_PahariEiJ_G0016640)	MGP_PahariEiJ_G0016641	Krtap21-1 (MGP_PahariEiJ_G0016642)	MGP_PahariEiJ_G0016643	Krtap8-1 (MGP_PahariEiJ_G0016644) #19	Krtap7-1 (MGP_PahariEiJ_G0016645)	Krtap11-1 (MGP_PahariEiJ_G0016646)	Tiam1 (MGP_PahariEiJ_G0016647) #20	Sod1 (MGP_PahariEiJ_G0016648) #22	Scaf4 (MGP_PahariEiJ_G0016649) #23	Hunk (MGP_PahariEiJ_G0016650) #24	Mis18a (MGP_PahariEiJ_G0016651) #25	Mrap (MGP_PahariEiJ_G0016652) #26	Urb1 (MGP_PahariEiJ_G0016653) #27	Eva1c (MGP_PahariEiJ_G0016654) #28	Cfap298 (MGP_PahariEiJ_G0016655) #29	Synj1 (MGP_PahariEiJ_G0016656) #30	Paxbp1 (MGP_PahariEiJ_G0016657) #31	MGP_PahariEiJ_G0016658 #32	MGP_PahariEiJ_G0016659	Olig2 (MGP_PahariEiJ_G0016660)	Olig1 (MGP_PahariEiJ_G0016661) #33	Ifnar2 (MGP_PahariEiJ_G0016662) #34	MGP_PahariEiJ_G0016663 #35
Rat	MODERN SPECIES	2	LOC102550973 (ENSRNOG00000066669)	Krtap19-5 (ENSRNOG00000040068)	AABR07033579.1 (ENSRNOG00000001566)	Krtap16-5 (ENSRNOG00000040064)	AABR07033579.3 (ENSRNOG00000061897)	ENSRNOG00000071041	LOC102551497 (ENSRNOG00000057156)	LOC102551201 (ENSRNOG00000055713)	LOC102551771 (ENSRNOG00000050693)	LOC102552244 (ENSRNOG00000040054)	Krtap8-1 (ENSRNOG00000043471) #19	AABR07033607.1 (ENSRNOG00000040039)	Krtap7-1 (ENSRNOG00000043017)	Krtap11-1 (ENSRNOG00000027478)	Tiam1 (ENSRNOG00000021569) #20	Sod1 (ENSRNOG00000002115) #22	Scaf4 (ENSRNOG00000002104) #23	Hunk (ENSRNOG00000002092) #24	Mis18a (ENSRNOG00000021555) #25	Mrap (ENSRNOG00000021524) #26	Urb1 (ENSRNOG00000002080) #27	Eva1c (ENSRNOG00000002072) #28	Cfap298 (ENSRNOG00000021399) #29	Synj1 (ENSRNOG00000002051) #30	Paxbp1 (ENSRNOG00000002036) #31	RGD1562726 (ENSRNOG00000028670) #32	Olig2 (ENSRNOG00000028658)	Olig1 (ENSRNOG00000028648) #33	Ifnar2 (ENSRNOG00000045668) #34	Il10rb (ENSRNOG00000028638) #35	Ifnar1 (ENSRNOG00000028594) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	947	ENSNGAG00000001816	ENSNGAG00000013988	ENSNGAG00000014050	ENSNGAG00000020393	ENSNGAG00000013841	ENSNGAG00000014164	ENSNGAG00000018613	ENSNGAG00000001337	ENSNGAG00000001063	ENSNGAG00000000875	ENSNGAG00000013922	ENSNGAG00000019408	Krtap8-1 (ENSNGAG00000013891) #19	Krtap11-1 (ENSNGAG00000021045)	Tiam1 (ENSNGAG00000017821) #20	Sod1 (ENSNGAG00000015416) #22	Scaf4 (ENSNGAG00000005214) #23	ENSNGAG00000000191 #24	Mis18a (ENSNGAG00000019424) #25	Mrap (ENSNGAG00000018367) #26	Urb1 (ENSNGAG00000001905) #27	Eva1c (ENSNGAG00000013376) #28	Cfap298 (ENSNGAG00000009170) #29	Synj1 (ENSNGAG00000000453) #30	Paxbp1 (ENSNGAG00000020646) #31	Olig2 (ENSNGAG00000019973)	Olig1 (ENSNGAG00000019569) #33	Ifnar2 (ENSNGAG00000003813) #34	Il10rb (ENSNGAG00000000235) #35	Ifngr2 (ENSNGAG00000001151) #37	Tmem50b (ENSNGAG00000014132)
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	54	2310061N02Rik (ENSJJAG00000020612)	ENSJJAG00000016810	ENSJJAG00000011706	ENSJJAG00000011064	ENSJJAG00000016567	ENSJJAG00000011498	ENSJJAG00000011799	ENSJJAG00000011237	ENSJJAG00000012751	ENSJJAG00000016258	ENSJJAG00000013970	Krtap8-1 (ENSJJAG00000012189) #19	Krtap7-1 (ENSJJAG00000012209)	Krtap11-1 (ENSJJAG00000002454)	Tiam1 (ENSJJAG00000019021) #20	ENSJJAG00000013595 #22	Scaf4 (ENSJJAG00000019447) #23	ENSJJAG00000011536	Hunk (ENSJJAG00000014419) #24	Mis18a (ENSJJAG00000006131) #25	Mrap (ENSJJAG00000015503) #26	Eva1c (ENSJJAG00000011026) #28	Cfap298 (ENSJJAG00000017189) #29	Synj1 (ENSJJAG00000020168) #30	Paxbp1 (ENSJJAG00000004137) #31	ENSJJAG00000023322	Olig2 (ENSJJAG00000019725)	Il10rb (ENSJJAG00000021402) #35	ENSJJAG00000013272 #36	Ifngr2 (ENSJJAG00000000609) #37	Tmem50b (ENSJJAG00000020263)
Lesser Egyptian jerboa	MODERN SPECIES	76	ENSJJAG00000013895	ENSJJAG00000011048	ENSJJAG00000022559	Mto1 (ENSJJAG00000006640)	Eef1a1 (ENSJJAG00000021540)	Slc17a5 (ENSJJAG00000012671)	ENSJJAG00000023397	ENSJJAG00000019028	ENSJJAG00000020395	ENSJJAG00000009738	Cd109 (ENSJJAG00000018810)	ENSJJAG00000008007	ENSJJAG00000013875	ENSJJAG00000004765	Col12a1 (ENSJJAG00000021947)	ENSJJAG00000002895 #22	Cox7a2 (ENSJJAG00000019442)	Tmem30a (ENSJJAG00000015851)	Filip1 (ENSJJAG00000014437)	ENSJJAG00000008502	Senp6 (ENSJJAG00000022873)	Myo6 (ENSJJAG00000021392)	Impg1 (ENSJJAG00000022816)	ENSJJAG00000006614	ENSJJAG00000013199	Htr1b (ENSJJAG00000018451)	Mei4 (ENSJJAG00000018138)	ENSJJAG00000005450	ENSJJAG00000014817	Irak1bp1 (ENSJJAG00000021600)	ENSJJAG00000007166
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00980000203465	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00900000143330	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Hystricomorpha	ANCESTRAL SPECIES	18	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013.c #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00730000111539	ENSGT01100000264006	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00900000143330	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013.c #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00730000111539	ENSGT01100000264006	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00900000143330	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Guinea pig	MODERN SPECIES	52	ENSCPOG00000036364	ENSCPOG00000037425	ENSCPOG00000034675	ENSCPOG00000038350	ENSCPOG00000034483	ENSCPOG00000010897	ENSCPOG00000008863	ENSCPOG00000002608	ENSCPOG00000033618	ENSCPOG00000037899	ENSCPOG00000002220	KRTAP8-1 (ENSCPOG00000005580) #19	KRTAP7-1 (ENSCPOG00000031819)	KRTAP11-1 (ENSCPOG00000036168)	TIAM1 (ENSCPOG00000013606) #20	SOD1 (ENSCPOG00000014223) #22	SCAF4 (ENSCPOG00000012443) #23	HUNK (ENSCPOG00000010546) #24	MIS18A (ENSCPOG00000027258) #25	ENSCPOG00000034158	URB1 (ENSCPOG00000006748) #27	EVA1C (ENSCPOG00000025257) #28	CFAP298 (ENSCPOG00000036050) #29	SYNJ1 (ENSCPOG00000012182) #30	PAXBP1 (ENSCPOG00000012439) #31	C21orf62 (ENSCPOG00000032349) #32	OLIG2 (ENSCPOG00000011590)	OLIG1 (ENSCPOG00000030289) #33	ENSCPOG00000037614 #34	IL10RB (ENSCPOG00000020318) #35	IFNAR1 (ENSCPOG00000010248) #36
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00390000007224.b #7	ENSGT00940000156013.c #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00900000142979	ENSGT01040000243806	ENSGT01100000264006	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00900000143330	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	266														KRTAP11-1 (ENSODEG00000018872)	TIAM1 (ENSODEG00000002827) #20	ENSODEG00000002788 #22	SCAF4 (ENSODEG00000002718) #23	ENSODEG00000002680	HUNK (ENSODEG00000002662) #24	MIS18A (ENSODEG00000002641) #25	URB1 (ENSODEG00000002587) #27	ENSODEG00000002530	EVA1C (ENSODEG00000002480) #28	ENSODEG00000002448 #29	ENSODEG00000002435	SYNJ1 (ENSODEG00000002409) #30	PAXBP1 (ENSODEG00000002385) #31	C21orf62 (ENSODEG00000002365) #32	OLIG2 (ENSODEG00000018811)	OLIG1 (ENSODEG00000019062) #33	IL10RB (ENSODEG00000002346) #35
Degu	MODERN SPECIES	51	CHUK (ENSODEG00000016580)	CWF19L1 (ENSODEG00000017213)	BLOC1S2 (ENSODEG00000016697)	PKD2L1 (ENSODEG00000016727)	ENSODEG00000016508	ENSODEG00000017085	ENSODEG00000020452	SYCE1 (ENSODEG00000016895)	CYP2E1 (ENSODEG00000016862)	ENSODEG00000020445	ENSODEG00000020400	ENSODEG00000017267	ENSODEG00000016628	ENSODEG00000016788	ENSODEG00000016399	ENSODEG00000020496 #22	MTG1 (ENSODEG00000016890)	ENSODEG00000020397	PAOX (ENSODEG00000016852)	ECHS1 (ENSODEG00000016897)	FUOM (ENSODEG00000017553)	ENSODEG00000016871	CALY (ENSODEG00000016902)	ENSODEG00000017202	ZNF511 (ENSODEG00000017284)	TUBGCP2 (ENSODEG00000016798)	ADAM8 (ENSODEG00000017169)	ENSODEG00000017114	ENSODEG00000016782	KNDC1 (ENSODEG00000017208)	ADGRA1 (ENSODEG00000016894)
Degu	DUPLICATION
Degu	MODERN SPECIES	86	SIT1 (ENSODEG00000014721)	CD72 (ENSODEG00000014802)	TESK1 (ENSODEG00000014973)	FAM166B (ENSODEG00000014541)	ENSODEG00000015419	ENSODEG00000014518	ENSODEG00000015095	ENSODEG00000014965	ATOSB (ENSODEG00000014990)	ENSODEG00000014316	PIGO (ENSODEG00000014589)	FANCG (ENSODEG00000016884)	VCP (ENSODEG00000014663)	ENSODEG00000014665	PHF24 (ENSODEG00000015569)	ENSODEG00000020209 #22	ENSODEG00000014905	CCL21 (ENSODEG00000015431)	CCL19 (ENSODEG00000014872)	ENSODEG00000014493	ENSODEG00000015377	IL11RA (ENSODEG00000014692)	GALT (ENSODEG00000015232)	SIGMAR1 (ENSODEG00000015160)	ARID3C (ENSODEG00000015133)	ENSODEG00000015225	RPP25L (ENSODEG00000020340)	CNTFR (ENSODEG00000014542)	ENHO (ENSODEG00000020230)	DNAI1 (ENSODEG00000015545)	FAM219A (ENSODEG00000015774)
Degu	MODERN SPECIES	61	CAMKMT (ENSODEG00000013111)	ENSODEG00000019899	ENSODEG00000019894	PREPL (ENSODEG00000012834)	SLC3A1 (ENSODEG00000011768)	PPM1B (ENSODEG00000012106)	ENSODEG00000011737	ENSODEG00000020039	ENSODEG00000019947	LRPPRC (ENSODEG00000011211)	ABCG8 (ENSODEG00000012555)	ABCG5 (ENSODEG00000010535)	DYNC2LI1 (ENSODEG00000011054)	PLEKHH2 (ENSODEG00000012982)	ENSODEG00000010547	ENSODEG00000012111 #22	HAAO (ENSODEG00000010886)	ENSODEG00000019803	ENSODEG00000011091	ENSODEG00000012097	KCNG3 (ENSODEG00000014536)	ENSODEG00000011166	COX7A2L (ENSODEG00000011433)	EML4 (ENSODEG00000011507)	PKDCC (ENSODEG00000014354)	ENSODEG00000010490	ENSODEG00000019723	ENSODEG00000010136	ENSODEG00000019775	ENSODEG00000009978	SLC8A1 (ENSODEG00000010025)
Long-tailed chinchilla	MODERN SPECIES	114	ENSCLAG00000017714	ENSCLAG00000017654	ENSCLAG00000006457	ENSCLAG00000006527	ENSCLAG00000017817	ENSCLAG00000017943	ENSCLAG00000014498	ENSCLAG00000018034	ENSCLAG00000017706	ENSCLAG00000017646	ENSCLAG00000004957	KRTAP8-1 (ENSCLAG00000017644) #19	KRTAP7-1 (ENSCLAG00000005387)	KRTAP11-1 (ENSCLAG00000017626)	TIAM1 (ENSCLAG00000005734) #20	SOD1 (ENSCLAG00000005820) #22	SCAF4 (ENSCLAG00000006298) #23	HUNK (ENSCLAG00000005512) #24	MIS18A (ENSCLAG00000005843) #25	ENSCLAG00000006933	URB1 (ENSCLAG00000005262) #27	EVA1C (ENSCLAG00000007978) #28	CFAP298 (ENSCLAG00000010614) #29	SYNJ1 (ENSCLAG00000009796) #30	PAXBP1 (ENSCLAG00000007450) #31	C21orf62 (ENSCLAG00000009787) #32	OLIG2 (ENSCLAG00000009979)	OLIG1 (ENSCLAG00000010235) #33	ENSCLAG00000004756 #34	IL10RB (ENSCLAG00000005404) #35	ENSCLAG00000007513
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000042795	ENSHGLG00000035362	ENSHGLG00000032425	ENSHGLG00000037287	KRTAP19-3 (ENSHGLG00000046162)	ENSHGLG00000042443	ENSHGLG00000037045	ENSHGLG00000042704	ENSHGLG00000050837	ENSHGLG00000046623	ENSHGLG00000045588	ENSHGLG00000035151	ENSHGLG00000033738 #19	KRTAP7-1 (ENSHGLG00000020396)	ENSHGLG00000050043 #20	SOD1 (ENSHGLG00000037309) #22	ENSHGLG00000014687	ENSHGLG00000032814	HUNK (ENSHGLG00000014832) #24	ENSHGLG00000040584	MIS18A (ENSHGLG00000004702) #25	EVA1C (ENSHGLG00000007768) #28	CFAP298 (ENSHGLG00000049021) #29	SYNJ1 (ENSHGLG00000006420) #30	PAXBP1 (ENSHGLG00000011800) #31	C21orf62 (ENSHGLG00000038795) #32	ENSHGLG00000045653	OLIG2 (ENSHGLG00000049807)	OLIG1 (ENSHGLG00000041895) #33	ENSHGLG00000017470 #34	IL10RB (ENSHGLG00000015427) #35
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00980000203465	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Marmotini	ANCESTRAL SPECIES	13	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00950000186330	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111511	ENSGT00730000111539	ENSGT00950000186330	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Squirrel	MODERN SPECIES	100	ENSSTOG00000008511	ENSSTOG00000033713	ENSSTOG00000025503	ENSSTOG00000031737	ENSSTOG00000028509	ENSSTOG00000034672	ENSSTOG00000019823	ENSSTOG00000031728	ENSSTOG00000019958	ENSSTOG00000034286	KRTAP8-1 (ENSSTOG00000026383) #19	KRTAP7-1 (ENSSTOG00000021190)	KRTAP11-1 (ENSSTOG00000024635)	TIAM1 (ENSSTOG00000005851) #20	ENSSTOG00000030549	SOD1 (ENSSTOG00000004434) #22	SCAF4 (ENSSTOG00000004450) #23	HUNK (ENSSTOG00000024744) #24	MIS18A (ENSSTOG00000004511) #25	ENSSTOG00000021442 #26	URB1 (ENSSTOG00000004539) #27	EVA1C (ENSSTOG00000026039) #28	CFAP298 (ENSSTOG00000015799) #29	SYNJ1 (ENSSTOG00000015806) #30	PAXBP1 (ENSSTOG00000014055) #31	C21orf62 (ENSSTOG00000032411) #32	OLIG2 (ENSSTOG00000020899)	OLIG1 (ENSSTOG00000027713) #33	IFNAR2 (ENSSTOG00000001265) #34	IL10RB (ENSSTOG00000001273) #35	IFNAR1 (ENSSTOG00000014989) #36
Arctic ground squirrel	MODERN SPECIES	121										ENSUPAG00010001033	ENSUPAG00010001037	KRTAP8-1 (ENSUPAG00010001044) #19	KRTAP7-1 (ENSUPAG00010001047)	KRTAP11-1 (ENSUPAG00010001054)	TIAM1 (ENSUPAG00010001067) #20	SOD1 (ENSUPAG00010001261) #22	SCAF4 (ENSUPAG00010001272) #23	HUNK (ENSUPAG00010001365) #24	MIS18A (ENSUPAG00010001398) #25	MRAP (ENSUPAG00010001416) #26	URB1 (ENSUPAG00010001432) #27	EVA1C (ENSUPAG00010001637) #28	CFAP298 (ENSUPAG00010001693) #29	SYNJ1 (ENSUPAG00010001714) #30	PAXBP1 (ENSUPAG00010001936) #31	C21orf62 (ENSUPAG00010001971) #32	OLIG2 (ENSUPAG00010001977)	IFNAR2 (ENSUPAG00010001980) #34	IL10RB (ENSUPAG00010001990) #35	IFNAR1 (ENSUPAG00010002002) #36	IFNGR2 (ENSUPAG00010002009) #37
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	522																ENSMMMG00000001091 #22
Alpin marmot	MODERN SPECIES	4	ENSMMMG00000018310	ENSMMMG00000018322	ENSMMMG00000018332	ENSMMMG00000018389	KRTAP15-1 (ENSMMMG00000018392)	ENSMMMG00000018401	ENSMMMG00000018414	ENSMMMG00000018445	ENSMMMG00000018449	ENSMMMG00000018510	KRTAP8-1 (ENSMMMG00000018516) #19	KRTAP7-1 (ENSMMMG00000018520)	KRTAP11-1 (ENSMMMG00000018525)	TIAM1 (ENSMMMG00000018539) #20	ENSMMMG00000018610	SOD1 (ENSMMMG00000000101) #22	SCAF4 (ENSMMMG00000000119) #23	HUNK (ENSMMMG00000000145) #24	MIS18A (ENSMMMG00000000183) #25	MRAP (ENSMMMG00000000197) #26	URB1 (ENSMMMG00000000218) #27	EVA1C (ENSMMMG00000000337) #28	ENSMMMG00000000442	CFAP298 (ENSMMMG00000000468) #29	SYNJ1 (ENSMMMG00000000553) #30	PAXBP1 (ENSMMMG00000000713) #31	C21orf62 (ENSMMMG00000000764) #32	OLIG2 (ENSMMMG00000000776)	IFNAR2 (ENSMMMG00000000794) #34	IL10RB (ENSMMMG00000000798) #35	ENSMMMG00000000809
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	1	KRTAP27-1 (ENSSVLG00005009977)	ENSSVLG00005009956	ENSSVLG00005009892	ENSSVLG00005009876	KRTAP13-3 (ENSSVLG00005009860)	ENSSVLG00005009818	KRTAP15-1 (ENSSVLG00005009803)	KRTAP19-2 (ENSSVLG00005009791)	KRTAP19-5 (ENSSVLG00005009758) #14	ENSSVLG00005009741	ENSSVLG00005009585	KRTAP8-1 (ENSSVLG00005009568) #19	KRTAP7-1 (ENSSVLG00005009553)	KRTAP11-1 (ENSSVLG00005009539)	TIAM1 (ENSSVLG00005009172) #20	SOD1 (ENSSVLG00005009037) #22	SCAF4 (ENSSVLG00005008966) #23	ENSSVLG00005008885 #24	MIS18A (ENSSVLG00005008836) #25	ENSSVLG00005008802 #26	ENSSVLG00005008770	URB1 (ENSSVLG00005008739) #27	EVA1C (ENSSVLG00005008630) #28	CFAP298 (ENSSVLG00005024931) #29	SYNJ1 (ENSSVLG00005024795) #30	PAXBP1 (ENSSVLG00005024598) #31	C21orf62 (ENSSVLG00005024581) #32	OLIG2 (ENSSVLG00005024572)	OLIG1 (ENSSVLG00005024562) #33	ENSSVLG00005024535 #34	IL10RB (ENSSVLG00005024491) #35
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005014497	ENSSVLG00005014453	ENSSVLG00005014416	ENSSVLG00005014346	ENSSVLG00005014167	ENSSVLG00005014115	ENSSVLG00005014095	ENSSVLG00005014041	ENSSVLG00005013973	ENSSVLG00005013905	ENSSVLG00005013859	ENSSVLG00005013827	ENSSVLG00005013742	ENSSVLG00005013716	ENSSVLG00005013629	ENSSVLG00005013588 #22	ENSSVLG00005013534	ENSSVLG00005013350	ENSSVLG00005013277	ENSSVLG00005022743	ENSSVLG00005022724	ENSSVLG00005022663	ENSSVLG00005022597	ENSSVLG00005022585	ENSSVLG00005022548	ENSSVLG00005022521	ENSSVLG00005022507	ENSSVLG00005022495	ENSSVLG00005022477	ENSSVLG00005022457	ENSSVLG00005022440
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000162109.C	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000183970	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Eulipotyphla	ANCESTRAL SPECIES	2209																ENSGT00940000155551 #22	ENSGT00530000063946.a #23
Common shrew	MODERN SPECIES	2976																SOD1 (ENSSARG00000009985) #22	SCAF4 (ENSSARG00000009994) #23
Hedgehog	MODERN SPECIES	3928																SOD1 (ENSEEUG00000015905) #22	ENSEEUG00000015913
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00730000111539	ENSGT00940000162109.C	ENSGT00940000162756	ENSGT00940000161951	ENSGT00940000162109.B	ENSGT00940000162109.A	ENSGT00950000183970	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000162109.B	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000183970	ENSGT00860000134229	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000162109.B	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000183970	ENSGT00860000134229	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Felidae	DUPLICATION
Felidae	DUPLICATION
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.B.h	ENSGT00940000162756.c	ENSGT00940000162109.B.g.a	ENSGT00940000161951	ENSGT00980000203465	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.e.a #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00940000178209	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Panthera	ANCESTRAL SPECIES	17	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162109.B.h	ENSGT00940000162756.c	ENSGT00940000162756.d	ENSGT00940000161951	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.e.a #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Panthera_a	ANCESTRAL SPECIES	21	ENSGT00940000162109.B.h	ENSGT00940000162756.c	ENSGT00940000162756.d	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000183970	ENSGT00950000183472	ENSGT00950000183564	ENSGT00950000183791	ENSGT00950000183533	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.e.a #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
leopard	MODERN SPECIES	81												KRTAP8-1 (ENSPPRG00000020895) #19	KRTAP7-1 (ENSPPRG00000020882)	KRTAP11-1 (ENSPPRG00000020873)	TIAM1 (ENSPPRG00000002849) #20	SOD1 (ENSPPRG00000001437) #22	SCAF4 (ENSPPRG00000000635) #23	HUNK (ENSPPRG00000022852) #24	MIS18A (ENSPPRG00000022990) #25	MRAP (ENSPPRG00000022999) #26	URB1 (ENSPPRG00000023131) #27	EVA1C (ENSPPRG00000023151) #28	CFAP298 (ENSPPRG00000023279) #29	SYNJ1 (ENSPPRG00000023469) #30	PAXBP1 (ENSPPRG00000024352) #31	C21orf62 (ENSPPRG00000024495) #32	OLIG2 (ENSPPRG00000020693)	OLIG1 (ENSPPRG00000020678) #33	IFNAR2 (ENSPPRG00000024508) #34	IL10RB (ENSPPRG00000024526) #35	IFNAR1 (ENSPPRG00000024594) #36
lion	MODERN SPECIES	9	KRTAP27-1 (ENSPLOG00000005754)	ENSPLOG00000005769	ENSPLOG00000005781	ENSPLOG00000005790	ENSPLOG00000005804	ENSPLOG00000005813	ENSPLOG00000005839	KRTAP13-3 (ENSPLOG00000005853)	KRTAP15-1 (ENSPLOG00000005872)	KRTAP19-8 (ENSPLOG00000005903)	KRTAP22-1 (ENSPLOG00000005933) #16	KRTAP8-1 (ENSPLOG00000005994) #19	KRTAP7-1 (ENSPLOG00000006013)	KRTAP11-1 (ENSPLOG00000006031)	TIAM1 (ENSPLOG00000006091) #20	ENSPLOG00000006257 #22	SCAF4 (ENSPLOG00000006292) #23	HUNK (ENSPLOG00000006371) #24	MIS18A (ENSPLOG00000006491) #25	ENSPLOG00000006518	URB1 (ENSPLOG00000006539) #27	EVA1C (ENSPLOG00000006595) #28	CFAP298 (ENSPLOG00000006706) #29	SYNJ1 (ENSPLOG00000006886) #30	PAXBP1 (ENSPLOG00000007200) #31	C21orf62 (ENSPLOG00000007307) #32	OLIG2 (ENSPLOG00000007330)	OLIG1 (ENSPLOG00000007344) #33	IFNAR2 (ENSPLOG00000007359) #34	IL10RB (ENSPLOG00000007392) #35	IFNAR1 (ENSPLOG00000007412) #36
Cat	MODERN SPECIES	240	CLDN8 (ENSFCAG00000009650)	KRTAP24-1 (ENSFCAG00000045459)	KRTAP25-1 (ENSFCAG00000041260)	KRTAP26-1 (ENSFCAG00000040719)	KRTAP27-1 (ENSFCAG00000037019)	ENSFCAG00000014480	ENSFCAG00000014479	ENSFCAG00000040662	KRTAP13-3 (ENSFCAG00000045640)	KRTAP15-1 (ENSFCAG00000025515)	ENSFCAG00000051052	KRTAP8-1 (ENSFCAG00000026050) #19	KRTAP7-1 (ENSFCAG00000022570)	KRTAP11-1 (ENSFCAG00000045393)	TIAM1 (ENSFCAG00000002364) #20	ENSFCAG00000002225 #22	SCAF4 (ENSFCAG00000002228) #23	HUNK (ENSFCAG00000028905) #24	MIS18A (ENSFCAG00000023285) #25	ENSFCAG00000044375 #26	URB1 (ENSFCAG00000002177) #27	EVA1C (ENSFCAG00000012496) #28	ENSFCAG00000048385	SYNJ1 (ENSFCAG00000012498) #30	PAXBP1 (ENSFCAG00000012499) #31	CC2H21orf62 (ENSFCAG00000012503) #32	OLIG2 (ENSFCAG00000033403)	OLIG1 (ENSFCAG00000042214) #33	IFNAR2 (ENSFCAG00000031700) #34	IL10RB (ENSFCAG00000012214) #35	IFNAR1 (ENSFCAG00000024317) #36
Felidae	ANCESTRAL SPECIES																	ENSGT00940000155551.e.b #22
Panthera	ANCESTRAL SPECIES																	ENSGT00940000155551.e.b #22
Tiger	MODERN SPECIES	370												KRTAP8-1 (ENSPTIG00000008039) #19	KRTAP7-1 (ENSPTIG00000008045)	KRTAP11-1 (ENSPTIG00000008051)	TIAM1 (ENSPTIG00000021469) #20	SOD1 (ENSPTIG00000021555) #22	SCAF4 (ENSPTIG00000021578) #23	HUNK (ENSPTIG00000021583) #24
Cat	MODERN SPECIES	2	RASSF2 (ENSFCAG00000028725)	ENSFCAG00000053205	SLC23A2 (ENSFCAG00000024001)	ENSFCAG00000036587	PCNA (ENSFCAG00000009068)	CDS2 (ENSFCAG00000031257)	ENSFCAG00000024563	PROKR2 (ENSFCAG00000035343)	GPCPD1 (ENSFCAG00000018300)	CHGB (ENSFCAG00000000220)	TRMT6 (ENSFCAG00000003102)	MCM8 (ENSFCAG00000011524)	CRLS1 (ENSFCAG00000023647)	LRRN4 (ENSFCAG00000001198)	FERMT1 (ENSFCAG00000019220)	ENSFCAG00000029904 #22	BMP2 (ENSFCAG00000037659)	HAO1 (ENSFCAG00000009832)	TMX4 (ENSFCAG00000040472)	PLCB1 (ENSFCAG00000014951)	PLCB4 (ENSFCAG00000005949)	LAMP5 (ENSFCAG00000005954)	PAK5 (ENSFCAG00000005955)	ENSFCAG00000006586	ENSFCAG00000048283	ANKEF1 (ENSFCAG00000009160)	SNAP25 (ENSFCAG00000010050)	MKKS (ENSFCAG00000008542)	SLX4IP (ENSFCAG00000022559)	JAG1 (ENSFCAG00000002195)	BTBD3 (ENSFCAG00000030089)
Felidae	ANCESTRAL SPECIES																	ENSGT00940000155551.f #22
Panthera	ANCESTRAL SPECIES																	ENSGT00940000155551.f #22
Panthera_a	ANCESTRAL SPECIES																	ENSGT00940000155551.f #22
lion	MODERN SPECIES	9	ROBO1 (ENSPLOG00000014250)	ENSPLOG00000014139	ENSPLOG00000014098	GBE1 (ENSPLOG00000013937)	ENSPLOG00000013875	CADM2 (ENSPLOG00000013632)	ENSPLOG00000013561	VGLL3 (ENSPLOG00000013497)	CHMP2B (ENSPLOG00000013401)	POU1F1 (ENSPLOG00000013268)	HTR1F (ENSPLOG00000013246)	CGGBP1 (ENSPLOG00000013226)	ZNF654 (ENSPLOG00000013196)	C3orf38 (ENSPLOG00000013154)	ENSPLOG00000013137	ENSPLOG00000013102 #22	EPHA3 (ENSPLOG00000012751)	PROS1 (ENSPLOG00000012461)	STX19 (ENSPLOG00000012404)	ARL13B (ENSPLOG00000012320)	NSUN3 (ENSPLOG00000012279)	EPHA6 (ENSPLOG00000012019)	ARL6 (ENSPLOG00000011951)	ENSPLOG00000011919	CRYBG3 (ENSPLOG00000011497)	RIOX2 (ENSPLOG00000011386)	GABRR3 (ENSPLOG00000011321)	ENSPLOG00000011276	ENSPLOG00000011252	ENSPLOG00000011136	ENSPLOG00000011104
Caniformia	ANCESTRAL SPECIES		ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000162109.B	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Canidae	ANCESTRAL SPECIES	39	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111539	ENSGT00940000162109.B.i.a.b	ENSGT00940000162109.B.i.b	ENSGT00940000162756	ENSGT00940000162109.B.i.a.a	ENSGT00940000162109.A	ENSGT00940000162109.B.j.b	ENSGT00940000162109.B.j.a	ENSGT00940000161951	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000169647	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111539	ENSGT00940000162109.B.i.a.b	ENSGT00940000162109.B.i.b	ENSGT00940000162756	ENSGT00940000162109.B.i.a.a	ENSGT01100000266216	ENSGT01090000261056	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000169647	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Dog	MODERN SPECIES	24	KRTAP25-1 (ENSCAFG00845021344)	KRTAP27-1 (ENSCAFG00845021363)	KRTAP13-4 (ENSCAFG00845021380)	ENSCAFG00845021400	ENSCAFG00845021418	ENSCAFG00845021436	KRTAP13-3 (ENSCAFG00845021477)	KRTAP22-1 (ENSCAFG00845021623) #16	ENSCAFG00845021700	KRTAP21-1 (ENSCAFG00845021718)	ENSCAFG00845021750	KRTAP8-1 (ENSCAFG00845021773) #19	KRTAP7-1 (ENSCAFG00845021796)	KRTAP11-1 (ENSCAFG00845021816)	TIAM1 (ENSCAFG00845021944) #20	SOD1 (ENSCAFG00845022725) #22	SCAF4 (ENSCAFG00845023056) #23	HUNK (ENSCAFG00845023628) #24	MIS18A (ENSCAFG00845023751) #25	ENSCAFG00845023798	URB1 (ENSCAFG00845023897) #27	EVA1C (ENSCAFG00845024607) #28	CFAP298 (ENSCAFG00845024773) #29	SYNJ1 (ENSCAFG00845025045) #30	PAXBP1 (ENSCAFG00845026174)	C31H21orf62 (ENSCAFG00845026309) #32	OLIG2 (ENSCAFG00845026359)	OLIG1 (ENSCAFG00845026412) #33	IFNAR2 (ENSCAFG00845026478) #34	IL10RB (ENSCAFG00845026648) #35	IFNAR1 (ENSCAFG00845026778) #36
Dingo	MODERN SPECIES	328	CLDN17 (ENSCAFG00020026176) #13	CLDN8 (ENSCAFG00020026171)	ENSCAFG00020026169	KRTAP27-1 (ENSCAFG00020026167)	ENSCAFG00020026166	ENSCAFG00020026164	ENSCAFG00020026162	ENSCAFG00020026161	ENSCAFG00020026160	ENSCAFG00020026158	KRTAP13-3 (ENSCAFG00020026157)	KRTAP8-1 (ENSCAFG00020026156) #19	KRTAP7-1 (ENSCAFG00020026155)	KRTAP11-1 (ENSCAFG00020026154)	TIAM1 (ENSCAFG00020026063) #20	SOD1 (ENSCAFG00020026042) #22	SCAF4 (ENSCAFG00020026019) #23	HUNK (ENSCAFG00020026005) #24	MIS18A (ENSCAFG00020026001) #25	ENSCAFG00020025994 #27	ENSCAFG00020025987 #27	ENSCAFG00020025985	EVA1C (ENSCAFG00020025979) #28	CFAP298 (ENSCAFG00020025972) #29	SYNJ1 (ENSCAFG00020025776) #30	ENSCAFG00020025666	C21orf62 (ENSCAFG00020025657) #32	OLIG2 (ENSCAFG00020025653)	OLIG1 (ENSCAFG00020025652) #33	IFNAR2 (ENSCAFG00020025644) #34	IL10RB (ENSCAFG00020025642) #35
Red fox	MODERN SPECIES	204																ENSVVUG00000002967 #22	SCAF4 (ENSVVUG00000002953) #23	HUNK (ENSVVUG00000002915) #24	MIS18A (ENSVVUG00000002895) #25	URB1 (ENSVVUG00000000551) #27	ENSVVUG00000000165	EVA1C (ENSVVUG00000000091)	CFAP298 (ENSVVUG00000023156) #29	SYNJ1 (ENSVVUG00000023125) #30	PAXBP1 (ENSVVUG00000023034)	C21orf62 (ENSVVUG00000023026) #32	OLIG2 (ENSVVUG00000023022)	IFNAR2 (ENSVVUG00000023014) #34	IL10RB (ENSVVUG00000023000) #35	IFNAR1 (ENSVVUG00000022996) #36	IFNGR2 (ENSVVUG00000022995) #37
Caniformia_b	ANCESTRAL SPECIES		ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111539	ENSGT00940000162109.B	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Mustelinae	ANCESTRAL SPECIES	90	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111539	ENSGT00940000162109.B	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00940000169647	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Ferret	MODERN SPECIES	219	ENSMPUG00000001017	ADAMTS5 (ENSMPUG00000001019)	N6AMT1 (ENSMPUG00000001030)	LTN1 (ENSMPUG00000001032)	RWDD2B (ENSMPUG00000001037) #7	USP16 (ENSMPUG00000001038) #8	CCT8 (ENSMPUG00000001044) #9	MAP3K7CL (ENSMPUG00000001048) #10	ENSMPUG00000019200	BACH1 (ENSMPUG00000001053) #11	GRIK1 (ENSMPUG00000001055) #12	CLDN8 (ENSMPUG00000019207)	ENSMPUG00000019215	KRTAP11-1 (ENSMPUG00000019219)	TIAM1 (ENSMPUG00000001062) #20	SOD1 (ENSMPUG00000001069) #22	SCAF4 (ENSMPUG00000001078) #23	HUNK (ENSMPUG00000001113) #24	MIS18A (ENSMPUG00000001117) #25	ENSMPUG00000001120 #26	URB1 (ENSMPUG00000001123) #27	ENSMPUG00000001134	EVA1C (ENSMPUG00000001147) #28	CFAP298 (ENSMPUG00000001149) #29	SYNJ1 (ENSMPUG00000001153) #30	PAXBP1 (ENSMPUG00000001224) #31	OLIG2 (ENSMPUG00000001227)	IFNAR2 (ENSMPUG00000001229) #34	IL10RB (ENSMPUG00000001247) #35	ENSMPUG00000001257	IFNAR1 (ENSMPUG00000001265) #36
American mink	MODERN SPECIES	26	ENSNVIG00000004556	ENSNVIG00000004564	ENSNVIG00000004567	ENSNVIG00000004572	ENSNVIG00000004580	KRTAP13-3 (ENSNVIG00000004606)	KRTAP15-1 (ENSNVIG00000004611)	ENSNVIG00000004622	KRTAP19-8 (ENSNVIG00000004624)	KRTAP6-2 (ENSNVIG00000004627)	KRTAP22-1 (ENSNVIG00000004629) #16	KRTAP8-1 (ENSNVIG00000004680) #19	KRTAP7-1 (ENSNVIG00000004686)	KRTAP11-1 (ENSNVIG00000004690)	TIAM1 (ENSNVIG00000004722) #20	SOD1 (ENSNVIG00000004846) #22	SCAF4 (ENSNVIG00000004859) #23	HUNK (ENSNVIG00000004944) #24	MIS18A (ENSNVIG00000004969) #25	ENSNVIG00000004983	URB1 (ENSNVIG00000005011) #27	EVA1C (ENSNVIG00000005072) #28	CFAP298 (ENSNVIG00000005117) #29	SYNJ1 (ENSNVIG00000005184) #30	ENSNVIG00000005730	CU062 (ENSNVIG00000005749) #32	OLIG2 (ENSNVIG00000005756)	OLIG1 (ENSNVIG00000005770) #33	ENSNVIG00000005773 #34	IL10RB (ENSNVIG00000005779) #35	IFNAR1 (ENSNVIG00000005801) #36
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000155551.g #22
Giant Panda	DUPLICATION
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	1457																ENSAMEG00000026021 #22
Giant Panda	MODERN SPECIES	1349																ENSAMEG00000028335 #22
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	1410																ENSAMEG00000026414 #22
Giant Panda	MODERN SPECIES	1361																ENSAMEG00000028805 #22
Ursidae	ANCESTRAL SPECIES	1	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111539	ENSGT00940000162756.a	ENSGT00940000162109.B.k	ENSGT00940000162109.A	ENSGT00940000161951	ENSGT00860000134312 #16	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.h #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00390000017515.o.b.w.a	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Ursus	ANCESTRAL SPECIES	49	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00730000111539	ENSGT00940000162109.B.l	ENSGT00940000162109.B.k	ENSGT00940000161951	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.h #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00390000017515.o.b.w.a	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36	ENSGT00940000160503 #37	ENSGT00940000155131	ENSGT00940000154065.b
American black bear	MODERN SPECIES	618																SOD1 (ENSUAMG00000008857) #22	SCAF4 (ENSUAMG00000008860) #23
Polar bear	MODERN SPECIES	240	GRIK1 (ENSUMAG00000016210) #12	CLDN17 (ENSUMAG00000016609) #13	CLDN8 (ENSUMAG00000016629)	KRTAP24-1 (ENSUMAG00000016632)	KRTAP27-1 (ENSUMAG00000016634)	ENSUMAG00000016635	ENSUMAG00000016640	ENSUMAG00000016642	KRTAP13-3 (ENSUMAG00000016652)	ENSUMAG00000016676	ENSUMAG00000016679	KRTAP8-1 (ENSUMAG00000016681) #19	KRTAP7-1 (ENSUMAG00000016682)	KRTAP11-1 (ENSUMAG00000016684)	TIAM1 (ENSUMAG00000016732) #20	SOD1 (ENSUMAG00000016919) #22	SCAF4 (ENSUMAG00000016962) #23	HUNK (ENSUMAG00000017146) #24	URB1 (ENSUMAG00000017419) #27	ENSUMAG00000018120	ENSUMAG00000018111	CFAP298 (ENSUMAG00000018123) #29	SYNJ1 (ENSUMAG00000018419) #30	PAXBP1 (ENSUMAG00000019940) #31	C21orf62 (ENSUMAG00000019962) #32	ENSUMAG00000019963	ENSUMAG00000019970 #34	IFNAR1 (ENSUMAG00000019981) #36	IFNGR2 (ENSUMAG00000020018) #37	TMEM50B (ENSUMAG00000020031)	DNAJC28 (ENSUMAG00000020035)
Giant Panda	MODERN SPECIES		ENSAMEG00000027821	ENSAMEG00000004078	ENSAMEG00000018854	ENSAMEG00000026073	ENSAMEG00000030787	KRTAP19-1 (ENSAMEG00000026296)	KRTAP19-6 (ENSAMEG00000024402)	KRTAP6-3 (ENSAMEG00000029859)	ENSAMEG00000028750	ENSAMEG00000027423 #16	ENSAMEG00000027714	KRTAP8-1 (ENSAMEG00000018803) #19	KRTAP7-1 (ENSAMEG00000018806)	KRTAP11-1 (ENSAMEG00000018808)	TIAM1 (ENSAMEG00000007716) #20	SOD1 (ENSAMEG00000015011) #22	SCAF4 (ENSAMEG00000014987) #23	HUNK (ENSAMEG00000024206) #24	ENSAMEG00000011984 #25	ENSAMEG00000011993	URB1 (ENSAMEG00000011998) #27	EVA1C (ENSAMEG00000015088) #28	CFAP298 (ENSAMEG00000015081) #29	SYNJ1 (ENSAMEG00000015028) #30	PAXBP1 (ENSAMEG00000015020) #31	C21orf62 (ENSAMEG00000019520) #32	ENSAMEG00000026010	OLIG2 (ENSAMEG00000029480)	IFNAR2 (ENSAMEG00000015000) #34	IL10RB (ENSAMEG00000014984) #35	IFNAR1 (ENSAMEG00000014939) #36
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Equus	ANCESTRAL SPECIES	42	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00550000076318	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000161951.`b.b	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00950000182767.b.b.c.a.a.a.d	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Donkey	MODERN SPECIES	9	ENSEASG00005032523	KRTAP13-3 (ENSEASG00005026067)	ENSEASG00005037459	ENSEASG00005033849	ENSEASG00005007787	ENSEASG00005032879	KRTAP20-1 (ENSEASG00005024919)	KRTAP21-2 (ENSEASG00005025529)	ENSEASG00005007780	ENSEASG00005007782	ENSEASG00005030342 #19	KRTAP8-1 (ENSEASG00005033925) #19	KRTAP7-1 (ENSEASG00005007775)	KRTAP11-1 (ENSEASG00005023745)	TIAM1 (ENSEASG00005007767) #20	SOD1 (ENSEASG00005007764) #22	SCAF4 (ENSEASG00005007756) #23	ENSEASG00005034048	HUNK (ENSEASG00005007746) #24	MIS18A (ENSEASG00005007739) #25	ENSEASG00005007737 #26	URB1 (ENSEASG00005007711) #27	EVA1C (ENSEASG00005007691) #28	CFAP298 (ENSEASG00005007688) #29	SYNJ1 (ENSEASG00005006287) #30	PAXBP1 (ENSEASG00005006214) #31	C21orf62 (ENSEASG00005006212) #32	OLIG2 (ENSEASG00005029582)	OLIG1 (ENSEASG00005027170) #33	IFNAR2 (ENSEASG00005006208) #34	IL10RB (ENSEASG00005006207) #35
Horse	MODERN SPECIES	18	CLDN8 (ENSECAG00000020713)	KRTAP24-1 (ENSECAG00000001540)	KRTAP25-1 (ENSECAG00000037829)	ENSECAG00000057209	KRTAP27-1 (ENSECAG00000002951)	ENSECAG00000035079	ENSECAG00000048774	ENSECAG00000044231	ENSECAG00000048751	ENSECAG00000060113	ENSECAG00000058212	KRTAP7-1 (ENSECAG00000029039)	ENSECAG00000049688	KRTAP19-8 (ENSECAG00000042559)	TIAM1 (ENSECAG00000032992) #20	SOD1 (ENSECAG00000008958) #22	SCAF4 (ENSECAG00000014248) #23	ENSECAG00000037230	HUNK (ENSECAG00000007153) #24	MIS18A (ENSECAG00000010326) #25	MRAP (ENSECAG00000012808) #26	URB1 (ENSECAG00000013206) #27	EVA1C (ENSECAG00000018743) #28	CFAP298 (ENSECAG00000019974) #29	SYNJ1 (ENSECAG00000004829) #30	PAXBP1 (ENSECAG00000016552) #31	C26H21orf62 (ENSECAG00000006590) #32	OLIG2 (ENSECAG00000006758)	OLIG1 (ENSECAG00000037026) #33	IFNAR2 (ENSECAG00000003532) #34	IL10RB (ENSECAG00000007359) #35
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT01090000261056	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36	ENSGT00940000160503 #37
Megabat	MODERN SPECIES	1008																SOD1 (ENSPVAG00000005216) #22	SCAF4 (ENSPVAG00000005220) #23	HUNK (ENSPVAG00000005225) #24
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00730000111539	ENSGT01090000261056	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36	ENSGT00940000160503 #37
Greater horseshoe bat	MODERN SPECIES	11	ENSRFEG00010010188	ENSRFEG00010010203	ENSRFEG00010010218	ENSRFEG00010010228	KRTAP15-1 (ENSRFEG00010010257)	ENSRFEG00010010288	KRTAP19-7 (ENSRFEG00010010349)	KRTAP20-2 (ENSRFEG00010010454)	ENSRFEG00010010564	KRTAP8-1 (ENSRFEG00010010583) #19	KRTAP7-1 (ENSRFEG00010010607)	KRTAP11-1 (ENSRFEG00010010626)	TIAM1 (ENSRFEG00010010676) #20	ENSRFEG00010010890	ENSRFEG00010010943	SOD1 (ENSRFEG00010000148) #22	SCAF4 (ENSRFEG00010000163) #23	HUNK (ENSRFEG00010000178) #24	MIS18A (ENSRFEG00010000185) #25	MRAP (ENSRFEG00010000197) #26	URB1 (ENSRFEG00010000219) #27	EVA1C (ENSRFEG00010000295) #28	CFAP298 (ENSRFEG00010000347) #29	SYNJ1 (ENSRFEG00010000545) #30	PAXBP1 (ENSRFEG00010000808) #31	C21orf62 (ENSRFEG00010000839) #32	OLIG2 (ENSRFEG00010000847)	ENSRFEG00010000890	IFNAR2 (ENSRFEG00010000912) #34	IL10RB (ENSRFEG00010000947) #35	IFNAR1 (ENSRFEG00010000975) #36
Microbat	MODERN SPECIES	2122																ENSMLUG00000011448 #22	SCAF4 (ENSMLUG00000011472) #23
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00860000134598	ENSGT00840000130947	ENSGT01090000260341	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Suina	ANCESTRAL SPECIES	35	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000161951	ENSGT00940000162109.B	ENSGT00950000183472	ENSGT00950000184153	ENSGT00950000183416	ENSGT00860000134312 #16	ENSGT00840000130947	ENSGT01090000260341	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Chacoan peccary	MODERN SPECIES	99											ENSCWAG00000001923	KRTAP8-1 (ENSCWAG00000001930) #19	KRTAP7-1 (ENSCWAG00000001936)	KRTAP11-1 (ENSCWAG00000001941)	TIAM1 (ENSCWAG00000002003) #20	SOD1 (ENSCWAG00000002231) #22	SCAF4 (ENSCWAG00000002250) #23	HUNK (ENSCWAG00000002287) #24	MIS18A (ENSCWAG00000002302) #25	URB1 (ENSCWAG00000002335) #27	EVA1C (ENSCWAG00000002359) #28	CFAP298 (ENSCWAG00000002416) #29	SYNJ1 (ENSCWAG00000002494) #30	PAXBP1 (ENSCWAG00000002660) #31	C21orf62 (ENSCWAG00000002668) #32	OLIG2 (ENSCWAG00000002675)	OLIG1 (ENSCWAG00000002678) #33	ENSCWAG00000002682	IFNAR2 (ENSCWAG00000002693) #34	IL10RB (ENSCWAG00000002705) #35	IFNAR1 (ENSCWAG00000002719) #36
Pig	MODERN SPECIES	4	ENSSSCG00000053856	ENSSSCG00000061363	KRTAP6-2 (ENSSSCG00000048455)	KRTAP22-1 (ENSSSCG00000057039) #16	ENSSSCG00000055559	KRTAP20-2 (ENSSSCG00000055516)	ENSSSCG00000056492	ENSSSCG00000060337	ENSSSCG00000055224	KRTAP21-1 (ENSSSCG00000056687)	ENSSSCG00000039409	KRTAP8-1 (ENSSSCG00000056362) #19	KRTAP7-1 (ENSSSCG00000062373)	KRTAP11-1 (ENSSSCG00000038131)	TIAM1 (ENSSSCG00000012034) #20	SOD1 (ENSSSCG00000021355) #22	SCAF4 (ENSSSCG00000021023) #23	HUNK (ENSSSCG00000029392) #24	MIS18A (ENSSSCG00000034229) #25	ENSSSCG00000040843 #26	URB1 (ENSSSCG00000032024) #27	EVA1C (ENSSSCG00000021598) #28	CFAP298 (ENSSSCG00000040827) #29	SYNJ1 (ENSSSCG00000012035) #30	PAXBP1 (ENSSSCG00000012037) #31	C21orf62 (ENSSSCG00000012038) #32	OLIG2 (ENSSSCG00000012039)	OLIG1 (ENSSSCG00000012040) #33	ENSSSCG00000036556 #34	ENSSSCG00000041300	IL10RB (ENSSSCG00000041289) #35
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00860000134598	ENSGT01090000260341	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Camelidae	DUPLICATION
Camelidae	ANCESTRAL SPECIES		ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000162756	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00950000184314	ENSGT01070000255210	ENSGT01040000243079	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551.i #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Alpaca	MODERN SPECIES	829																SOD1 (ENSVPAG00000012396) #22	SCAF4 (ENSVPAG00000012397) #23	ENSVPAG00000012399 #24
Arabian camel	MODERN SPECIES		ENSCDRG00005001565	KRTAP13-4 (ENSCDRG00005001578)	ENSCDRG00005001587	ENSCDRG00005001596	KRTAP13-3 (ENSCDRG00005001610)	KRTAP19-5 (ENSCDRG00005001625) #14	ENSCDRG00005001636	ENSCDRG00005001641	ENSCDRG00005001653	KRTAP20-1 (ENSCDRG00005001658)	ENSCDRG00005001663	KRTAP8-1 (ENSCDRG00005001679) #19	KRTAP7-1 (ENSCDRG00005001686)	KRTAP11-1 (ENSCDRG00005001688)	TIAM1 (ENSCDRG00005001724) #20	SOD1 (ENSCDRG00005001811) #22	SCAF4 (ENSCDRG00005001828) #23	HUNK (ENSCDRG00005001856) #24	MIS18A (ENSCDRG00005001867) #25	URB1 (ENSCDRG00005001883) #27	EVA1C (ENSCDRG00005001957) #28	CFAP298 (ENSCDRG00005002011) #29	SYNJ1 (ENSCDRG00005002057) #30	ENSCDRG00005002369	PAXBP1 (ENSCDRG00005002383) #31	C21orf62 (ENSCDRG00005002400) #32	OLIG2 (ENSCDRG00005002406)	OLIG1 (ENSCDRG00005002416) #33	IFNAR2 (ENSCDRG00005002424) #34	IL10RB (ENSCDRG00005002438) #35	IFNAR1 (ENSCDRG00005002453) #36
Camelidae	ANCESTRAL SPECIES																	ENSGT00940000155551.j #22
Arabian camel	MODERN SPECIES	4	LRRIQ3 (ENSCDRG00005009954)	TNNI3K (ENSCDRG00005010113)	LRRC53 (ENSCDRG00005010584)	ENSCDRG00005010684	ENSCDRG00005010774	TYW3 (ENSCDRG00005010900)	LHX8 (ENSCDRG00005011024)	SLC44A5 (ENSCDRG00005011212)	ACADM (ENSCDRG00005011717)	RABGGTB (ENSCDRG00005012036)	MSH4 (ENSCDRG00005012261)	ASB17 (ENSCDRG00005012510)	ST6GALNAC3 (ENSCDRG00005012552)	ST6GALNAC5 (ENSCDRG00005012633)	PIGK (ENSCDRG00005012684)	ENSCDRG00005012829 #22	AK5 (ENSCDRG00005012861)	ZZZ3 (ENSCDRG00005013030)	USP33 (ENSCDRG00005013230)	MIGA1 (ENSCDRG00005013485)	NEXN (ENSCDRG00005013657)	ENSCDRG00005013957	DNAJB4 (ENSCDRG00005014458)	GIPC2 (ENSCDRG00005014503)	PTGFR (ENSCDRG00005014602)	IFI44L (ENSCDRG00005014623)	IFI44 (ENSCDRG00005014665)	ADGRL4 (ENSCDRG00005014755)	ADGRL2 (ENSCDRG00005015074)	ENSCDRG00005015601	ENSCDRG00005006665
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00860000134598	ENSGT01090000260341	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00860000134598	ENSGT00950000184153	ENSGT00950000183791	ENSGT01090000260341	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00730000111511	ENSGT00940000162109.C	ENSGT00950000184153	ENSGT00950000183791	ENSGT01090000260341	ENSGT00960000187414	ENSGT01000000221969	ENSGT00530000064274 #19	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00730000111511	ENSGT00940000162109.C	ENSGT00950000184153	ENSGT00950000183791	ENSGT00940000162756	ENSGT00940000162109.B.c	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT01050000245033	ENSGT00960000187414	ENSGT01000000221969	ENSGT00530000064274 #19	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00730000111511	ENSGT00950000184153	ENSGT00950000183791	ENSGT01050000245033	ENSGT00960000187414	ENSGT01000000221969	ENSGT00530000064274 #19	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00950000184153	ENSGT00950000183791	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00910000147901	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Beluga whale	MODERN SPECIES	111	ENSDLEG00000021186	ENSDLEG00000021185	ENSDLEG00000021184	ENSDLEG00000021180	ENSDLEG00000021178	ENSDLEG00000021175	ENSDLEG00000021172	KRTAP15-1 (ENSDLEG00000021170)	ENSDLEG00000021167	KRTAP19-7 (ENSDLEG00000021166)	ENSDLEG00000021164	ENSDLEG00000021162	KRTAP11-1 (ENSDLEG00000021160)	ENSDLEG00000021157 #20	ENSDLEG00000021155 #20	SOD1 (ENSDLEG00000021153) #22	SCAF4 (ENSDLEG00000021147) #23	HUNK (ENSDLEG00000021142) #24	MIS18A (ENSDLEG00000021139) #25	MRAP (ENSDLEG00000021138) #26	URB1 (ENSDLEG00000021132) #27	EVA1C (ENSDLEG00000021118) #28	CFAP298 (ENSDLEG00000021112) #29	SYNJ1 (ENSDLEG00000020920) #30	ENSDLEG00000020825	PAXBP1 (ENSDLEG00000020795) #31	C21orf62 (ENSDLEG00000020786) #32	OLIG2 (ENSDLEG00000020781)	OLIG1 (ENSDLEG00000020779) #33	IFNAR2 (ENSDLEG00000020773) #34	IL10RB (ENSDLEG00000020769) #35
Narwhal	MODERN SPECIES	297	CLDN17 (ENSMMNG00015002607) #13	CLDN8 (ENSMMNG00015002596)	ENSMMNG00015002573	ENSMMNG00015002541	KRTAP13-3 (ENSMMNG00015002529)	ENSMMNG00015002506	KRTAP15-1 (ENSMMNG00015002483)	KRTAP19-2 (ENSMMNG00015002468)	ENSMMNG00015002431	KRTAP19-6 (ENSMMNG00015002423)	KRTAP19-7 (ENSMMNG00015002415)	ENSMMNG00015002351	KRTAP8-1 (ENSMMNG00015002342) #19	KRTAP11-1 (ENSMMNG00015002324)	TIAM1 (ENSMMNG00015002221) #20	SOD1 (ENSMMNG00015002159) #22	SCAF4 (ENSMMNG00015002112) #23	HUNK (ENSMMNG00015002072) #24	MIS18A (ENSMMNG00015002043) #25	ENSMMNG00015002016 #26	URB1 (ENSMMNG00015001941) #27	ENSMMNG00015001856	CFAP298 (ENSMMNG00015001805) #29	SYNJ1 (ENSMMNG00015001641) #30	ENSMMNG00015001498	PAXBP1 (ENSMMNG00015001466) #31	C21orf62 (ENSMMNG00015001444) #32	OLIG2 (ENSMMNG00015001431)	OLIG1 (ENSMMNG00015001419) #33	IFNAR2 (ENSMMNG00015001396) #34	IL10RB (ENSMMNG00015001357) #35
Vaquita	MODERN SPECIES	15	ENSPSNG00000017921	ENSPSNG00000017975	ENSPSNG00000017997	ENSPSNG00000018158	KRTAP15-1 (ENSPSNG00000018174)	KRTAP19-2 (ENSPSNG00000018192)	ENSPSNG00000018295	KRTAP19-6 (ENSPSNG00000018325)	KRTAP19-7 (ENSPSNG00000018343)	ENSPSNG00000018356	ENSPSNG00000018375	ENSPSNG00000018395	KRTAP8-1 (ENSPSNG00000018427) #19	TIAM1 (ENSPSNG00000018566) #20	ENSPSNG00000019049	SOD1 (ENSPSNG00000019088) #22	SCAF4 (ENSPSNG00000019142) #23	HUNK (ENSPSNG00000000164) #24	MIS18A (ENSPSNG00000000189) #25	MRAP (ENSPSNG00000000204) #26	URB1 (ENSPSNG00000000249) #27	ENSPSNG00000000372	CFAP298 (ENSPSNG00000000434) #29	SYNJ1 (ENSPSNG00000000790) #30	PAXBP1 (ENSPSNG00000001317) #31	C21orf62 (ENSPSNG00000001342) #32	OLIG2 (ENSPSNG00000001353)	OLIG1 (ENSPSNG00000001364) #33	IFNAR2 (ENSPSNG00000001381) #34	IL10RB (ENSPSNG00000001403) #35	IFNAR1 (ENSPSNG00000001435) #36
Dolphin	MODERN SPECIES	4657																SOD1 (ENSTTRG00000010955) #22	SCAF4 (ENSTTRG00000010963) #23
Sperm whale	MODERN SPECIES	19	ENSPCTG00005002325	ENSPCTG00005002334	KRTAP15-1 (ENSPCTG00005002379)	KRTAP19-2 (ENSPCTG00005002385)	KRTAP19-5 (ENSPCTG00005002391) #14	ENSPCTG00005002396	KRTAP19-6 (ENSPCTG00005002408)	KRTAP19-7 (ENSPCTG00005002417)	KRTAP21-1 (ENSPCTG00005002461)	ENSPCTG00005002470	ENSPCTG00005002481	KRTAP8-1 (ENSPCTG00005002493) #19	TIAM1 (ENSPCTG00005002554) #20	ENSPCTG00005002633	ENSPCTG00005002649	SOD1 (ENSPCTG00005002658) #22	SCAF4 (ENSPCTG00005002739) #23	HUNK (ENSPCTG00005002812) #24	MIS18A (ENSPCTG00005002827) #25	ENSPCTG00005002863 #27	EVA1C (ENSPCTG00005002920) #28	CFAP298 (ENSPCTG00005002934) #29	SYNJ1 (ENSPCTG00005003044) #30	PAXBP1 (ENSPCTG00005003338) #31	C8H21orf62 (ENSPCTG00005003354) #32	OLIG2 (ENSPCTG00005003364)	OLIG1 (ENSPCTG00005003370) #33	ENSPCTG00005003381	IFNAR2 (ENSPCTG00005003398) #34	IFNAR1 (ENSPCTG00005003415) #36	IFNGR2 (ENSPCTG00005003435) #37
Blue whale	MODERN SPECIES	15	MAP3K7CL (ENSBMSG00010017729) #10	BACH1 (ENSBMSG00010017764) #11	GRIK1 (ENSBMSG00010017919) #12	CLDN17 (ENSBMSG00010020351) #13	CLDN8 (ENSBMSG00010020367)	ENSBMSG00010020394	ENSBMSG00010020441	KRTAP13-3 (ENSBMSG00010020452)	KRTAP15-1 (ENSBMSG00010020460)	KRTAP19-2 (ENSBMSG00010020469)	KRTAP19-6 (ENSBMSG00010020494)	KRTAP19-7 (ENSBMSG00010020502)	KRTAP11-1 (ENSBMSG00010020529)	TIAM1 (ENSBMSG00010020586) #20	ENSBMSG00010020769	SOD1 (ENSBMSG00010020783) #22	ENSBMSG00010020802 #23	HUNK (ENSBMSG00010020829) #24	MIS18A (ENSBMSG00010020839) #25	URB1 (ENSBMSG00010020887) #27	EVA1C (ENSBMSG00010020963) #28	CFAP298 (ENSBMSG00010021022) #29	SYNJ1 (ENSBMSG00010021085) #30	ENSBMSG00010021224	PAXBP1 (ENSBMSG00010021243) #31	C21orf62 (ENSBMSG00010021249) #32	ENSBMSG00010021257	OLIG2 (ENSBMSG00010021265)	OLIG1 (ENSBMSG00010021270) #33	IFNAR2 (ENSBMSG00010021336) #34	IL10RB (ENSBMSG00010021390) #35
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000159077	ENSGT00940000162109.B.e	ENSGT00940000162109.B.f	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT01090000260513	ENSGT01050000245033	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Yarkand deer	MODERN SPECIES	24	ENSCHYG00000025280	ENSCHYG00000025271	ENSCHYG00000025265	ENSCHYG00000025259	ENSCHYG00000025252	ENSCHYG00000025231	ENSCHYG00000025209	ENSCHYG00000025195	ENSCHYG00000025192	ENSCHYG00000025185 #19	ENSCHYG00000025179 #19	KRTAP7-1 (ENSCHYG00000025177)	KRTAP11-1 (ENSCHYG00000025146)	ENSCHYG00000025126	TIAM1 (ENSCHYG00000024768) #20	SOD1 (ENSCHYG00000024646) #22	SCAF4 (ENSCHYG00000024539) #23	HUNK (ENSCHYG00000024395) #24	MIS18A (ENSCHYG00000024347) #25	ENSCHYG00000024336 #26	URB1 (ENSCHYG00000024118) #27	ENSCHYG00000023975	SYNJ1 (ENSCHYG00000022521) #30	PAXBP1 (ENSCHYG00000022328) #31	C21orf62 (ENSCHYG00000022299) #32	OLIG2 (ENSCHYG00000022271)	OLIG1 (ENSCHYG00000022248) #33	IFNAR2 (ENSCHYG00000022081) #34	IL10RB (ENSCHYG00000022003) #35	IFNAR1 (ENSCHYG00000021948) #36	IFNGR2 (ENSCHYG00000021916) #37
Percora_a	ANCESTRAL SPECIES	7	ENSGT00940000162756	ENSGT00940000162109.B.e	ENSGT00940000162109.B.f	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00950000183791	ENSGT01050000245033.c.b.b	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Siberian musk deer	MODERN SPECIES	1262																ENSMMSG00000022653 #22	SCAF4 (ENSMMSG00000022612) #23	HUNK (ENSMMSG00000022584) #24	MIS18A (ENSMMSG00000022567) #25	ENSMMSG00000022559 #26	URB1 (ENSMMSG00000022537) #27	EVA1C (ENSMMSG00000022510) #28	ENSMMSG00000022487 #29	SYNJ1 (ENSMMSG00000022241) #30	PAXBP1 (ENSMMSG00000022130) #31	C21orf62 (ENSMMSG00000022112) #32	OLIG2 (ENSMMSG00000022105)	OLIG1 (ENSMMSG00000022099) #33
Bovidae	ANCESTRAL SPECIES	9	ENSGT00950000183791	ENSGT00940000165160 #14	ENSGT00950000183472	ENSGT00860000134229	ENSGT00940000162109.A	ENSGT00940000162756	ENSGT00940000162109.B.e	ENSGT00940000162109.B.f	ENSGT00940000161951	ENSGT01050000245033.c.b.b.d	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00390000017491.t.u.t	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Bovinae	ANCESTRAL SPECIES	6	ENSGT00860000134229	ENSGT00910000148394	ENSGT00940000162109.A	ENSGT00940000162756	ENSGT00940000162109.B.e	ENSGT00940000162109.B.f	ENSGT00940000161951	ENSGT00950000186330	ENSGT00950000186363.a	ENSGT01050000245033.c.b.b.d.b	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00390000017491.t.u.t	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Bos	ANCESTRAL SPECIES	7	ENSGT00910000148394	ENSGT00940000162109.A	ENSGT00940000162756	ENSGT00940000162109.B.e	ENSGT00940000162109.B.f	ENSGT00940000161951	ENSGT00950000186330	ENSGT00950000186363.a	ENSGT01050000245033.c.b.a.a.d	ENSGT01050000245033.c.b.a.b	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00390000017491.t.u.t	ENSGT00990000203553.c.b.o.a	ENSGT00510000049322 #34
Bos_b	DUPLICATION
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000161951	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00950000186363.b	ENSGT00950000186330	ENSGT01050000245033.c.b.b.d.b	ENSGT01050000245033.c.b.a.a.d	ENSGT01050000245033.c.b.a.b	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294.m #20	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.a.a.b.a	ENSGT00940000156294.n #20	ENSGT00940000155551.k #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499.c #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00390000017491.t.u.t	ENSGT00990000203553.c.b.o.a	ENSGT00510000049322 #34
Cow	MODERN SPECIES		ENSBTAG00000052321	ENSBTAG00000051544	ENSBTAG00000052530	ENSBTAG00000044154	ENSBTAG00000052340	ENSBTAG00000049468	ENSBTAG00000049506	ENSBTAG00000054173	ENSBTAG00000050662	ENSBTAG00000048503	KRTAP8-1 (ENSBTAG00000015812) #19	KRTAP7-1 (ENSBTAG00000046804)	KRTAP11-1 (ENSBTAG00000034869)	ENSBTAG00000048631 #20	TIAM1 (ENSBTAG00000017839) #20	SOD1 (ENSBTAG00000018854) #22	SCAF4 (ENSBTAG00000018855) #23	HUNK (ENSBTAG00000020762) #24	MIS18A (ENSBTAG00000016619) #25	MRAP (ENSBTAG00000023718) #26	URB1 (ENSBTAG00000012412) #27	EVA1C (ENSBTAG00000017310) #28	CFAP298 (ENSBTAG00000003059) #29	SYNJ1 (ENSBTAG00000003063) #30	PAXBP1 (ENSBTAG00000003064) #31	C1H21orf62 (ENSBTAG00000043993) #32	OLIG2 (ENSBTAG00000049136)	OLIG1 (ENSBTAG00000037547) #33	ENSBTAG00000051548	ENSBTAG00000051429	IFNAR2 (ENSBTAG00000015212) #34
Hybrid Bos Indicus	MODERN SPECIES		KRTAP6-2 (ENSBIXG00005028686)	ENSBIXG00005002364	ENSBIXG00005028714	ENSBIXG00005028719	ENSBIXG00005028727	ENSBIXG00005004972	ENSBIXG00005028766	ENSBIXG00005004980	ENSBIXG00005028792	ENSBIXG00005004989	KRTAP8-1 (ENSBIXG00005028809) #19	KRTAP7-1 (ENSBIXG00005002328)	KRTAP11-1 (ENSBIXG00005004999)	ENSBIXG00005028842	TIAM1 (ENSBIXG00005002204) #20	ENSBIXG00005028977 #22	SCAF4 (ENSBIXG00005005115) #23	HUNK (ENSBIXG00005001939) #24	MIS18A (ENSBIXG00005001911) #25	URB1 (ENSBIXG00005029122) #27	EVA1C (ENSBIXG00005005199) #28	SYNJ1 (ENSBIXG00005001562) #30	PAXBP1 (ENSBIXG00005001540) #31	ENSBIXG00005005281 #32	OLIG2 (ENSBIXG00005001524)	OLIG1 (ENSBIXG00005001523) #33	ENSBIXG00005001521	ENSBIXG00005029244	IFNAR2 (ENSBIXG00005005287) #34	IL10RB (ENSBIXG00005001518) #35	IFNAR1 (ENSBIXG00005029248) #36
Bos_b	ANCESTRAL SPECIES																	ENSGT00940000155551.l #22
Cow	MODERN SPECIES	4	HAO1 (ENSBTAG00000019811)	ADRA1D (ENSBTAG00000019504)	SMOX (ENSBTAG00000001112)	RNF24 (ENSBTAG00000007922)	ENSBTAG00000050318	PANK2 (ENSBTAG00000007920)	ENSBTAG00000053268	MAVS (ENSBTAG00000013545)	ENSBTAG00000054341	AP5S1 (ENSBTAG00000008439)	CDC25B (ENSBTAG00000008436)	CENPB (ENSBTAG00000045784)	SPEF1 (ENSBTAG00000006578)	ADISSP (ENSBTAG00000018735)	HSPA12B (ENSBTAG00000018732)	ENSBTAG00000027412 #22	SIGLEC1 (ENSBTAG00000013167)	ADAM33 (ENSBTAG00000013163)	GFRA4 (ENSBTAG00000013160)	ATRN (ENSBTAG00000003848)	DNAAF9 (ENSBTAG00000003494)	SLC4A11 (ENSBTAG00000027409)	ITPA (ENSBTAG00000013776)	DDRGK1 (ENSBTAG00000013753)	LZTS3 (ENSBTAG00000020454)	UBOX5 (ENSBTAG00000015379)	FASTKD5 (ENSBTAG00000051021)	AVP (ENSBTAG00000008027)	OXT (ENSBTAG00000008026)	MRPS26 (ENSBTAG00000000825)	GNRH2 (ENSBTAG00000049511)
Bos_a	ANCESTRAL SPECIES	59	ENSGT00730000111080.b.f	ENSGT00860000134229	ENSGT00950000183472	ENSGT00940000165160 #14	ENSGT00950000186363.b	ENSGT00950000186330	ENSGT00950000186363.a	ENSGT01050000245033.c.b.a.a.d	ENSGT01050000245033.c.b.a.b	ENSGT00960000187414	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.a.a.b.a	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00390000017491.t.u.t	ENSGT00990000203553.c.b.o.a	ENSGT00510000049322 #34
Domestic yak	MODERN SPECIES		KRTAP19-5 (ENSBGRG00000000097) #14	ENSBGRG00000000099	ENSBGRG00000000100	ENSBGRG00000000101	ENSBGRG00000000103	ENSBGRG00000000105	ENSBGRG00000000106	ENSBGRG00000000107	ENSBGRG00000000108	KRTAP8-1 (ENSBGRG00000000109) #19	KRTAP7-1 (ENSBGRG00000000110)	KAP11.1 (ENSBGRG00000000111)	TIAM1 (ENSBGRG00000000112) #20	ENSBGRG00000000114	ENSBGRG00000000116	SOD1 (ENSBGRG00000000117) #22	SCAF4 (ENSBGRG00000000118) #23	HUNK (ENSBGRG00000000119) #24	MIS18A (ENSBGRG00000000120) #25	ENSBGRG00000000121 #26	URB1 (ENSBGRG00000000122) #27	EVA1C (ENSBGRG00000000123) #28	CFAP298 (ENSBGRG00000000124) #29	SYNJ1 (ENSBGRG00000000125) #30	PAXBP1 (ENSBGRG00000000127) #31	C21orf62 (ENSBGRG00000000128) #32	OLIG1 (ENSBGRG00000000129) #33	ENSBGRG00000000130	IFNAR2 (ENSBGRG00000000131) #34	IL10RB (ENSBGRG00000000132) #35	IFNAR1 (ENSBGRG00000000133) #36
Wild yak	MODERN SPECIES	556																SOD1 (ENSBMUG00000007290) #22	SCAF4 (ENSBMUG00000007449) #23	HUNK (ENSBMUG00000007769) #24	MIS18A (ENSBMUG00000007776) #25	ENSBMUG00000007787	URB1 (ENSBMUG00000007809) #27	EVA1C (ENSBMUG00000007846) #28	CFAP298 (ENSBMUG00000007881) #29	SYNJ1 (ENSBMUG00000008123) #30	PAXBP1 (ENSBMUG00000008350) #31	C21orf62 (ENSBMUG00000008364) #32	OLIG2 (ENSBMUG00000008374)	ENSBMUG00000008393	ENSBMUG00000008399	IFNAR2 (ENSBMUG00000008422) #34	IL10RB (ENSBMUG00000008447) #35
American bison	MODERN SPECIES	3339			ENSBBBG00000016296	SYT4 (ENSBBBG00000016325)	ENSBBBG00000016335	ENSBBBG00000016374	SERPINB8 (ENSBBBG00000004067)	CDH7 (ENSBBBG00000016500)	CDH19 (ENSBBBG00000016564)	DSEL (ENSBBBG00000000763)	ENSBBBG00000000749	ENSBBBG00000006848	TMX3 (ENSBBBG00000004107)	CCDC102B (ENSBBBG00000004123)	TIAM1 (ENSBBBG00000007661) #20	SOD1 (ENSBBBG00000016855) #22	SCAF4 (ENSBBBG00000017043) #23	HUNK (ENSBBBG00000008926) #24	MIS18A (ENSBBBG00000017118) #25	ENSBBBG00000017133 #26	URB1 (ENSBBBG00000004256) #27	EVA1C (ENSBBBG00000017293) #28	CFAP298 (ENSBBBG00000017374) #29	SYNJ1 (ENSBBBG00000007094) #30	PAXBP1 (ENSBBBG00000017659) #31	C21orf62 (ENSBBBG00000017668) #32	OLIG2 (ENSBBBG00000017676)	ENSBBBG00000004373	ENSBBBG00000017687 #34	IL10RB (ENSBBBG00000017701) #35	IFNAR1 (ENSBBBG00000017713) #36
Caprinae	ANCESTRAL SPECIES	42	ENSGT00940000162109.B.e	ENSGT00940000162109.B.f.a	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT00860000134229	ENSGT01090000262067	ENSGT01060000251167	ENSGT01010000228926	ENSGT01100000266115	ENSGT00990000212981.B	ENSGT00990000212981.A	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00390000017491.t.u.t	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Goat	MODERN SPECIES		ENSCHIG00000025484	ENSCHIG00000005099	ENSCHIG00000010406	ENSCHIG00000015280	ENSCHIG00000009865	ENSCHIG00000016437	ENSCHIG00000010356	ENSCHIG00000009372	ENSCHIG00000011204	ENSCHIG00000002864 #19	ENSCHIG00000012716 #19	KRTAP7-1 (ENSCHIG00000008395)	KRTAP11-1 (ENSCHIG00000002902)	ENSCHIG00000014054	TIAM1 (ENSCHIG00000017920) #20	SOD1 (ENSCHIG00000014496) #22	SCAF4 (ENSCHIG00000008385) #23	HUNK (ENSCHIG00000014504) #24	MIS18A (ENSCHIG00000008710) #25	URB1 (ENSCHIG00000015645) #27	EVA1C (ENSCHIG00000017088) #28	CFAP298 (ENSCHIG00000026948) #29	SYNJ1 (ENSCHIG00000005095) #30	PAXBP1 (ENSCHIG00000021245) #31	OLIG2 (ENSCHIG00000007434)	OLIG1 (ENSCHIG00000020025) #33	ENSCHIG00000015210	IFNAR2 (ENSCHIG00000019897) #34	IL10RB (ENSCHIG00000019891) #35	IFNAR1 (ENSCHIG00000018032) #36	IFNGR2 (ENSCHIG00000017662) #37
Rambouillet Sheep	MODERN SPECIES		KRTAP19-6 (ENSOARG00020001557)	KRTAP6-1 (ENSOARG00020001540)	KAP6-L (ENSOARG00020001538)	KAP6-2 (ENSOARG00020001528)	KAP6-2 (ENSOARG00020001520)	KRTAP20-2 (ENSOARG00020001503)	ENSOARG00020001488	ENSOARG00020001483	ENSOARG00020001474	KRTAP21-1 (ENSOARG00020001467)	KRTAP8-2 (ENSOARG00020001458) #19	KAP8 (ENSOARG00020001446) #19	KAP7 (ENSOARG00020001442)	KRTAP11-1 (ENSOARG00020001438)	TIAM1 (ENSOARG00020001378) #20	SOD1 (ENSOARG00020001337) #22	SCAF4 (ENSOARG00020001317) #23	HUNK (ENSOARG00020001296) #24	ENSOARG00020001277 #25	ENSOARG00020001242	ENSOARG00020001232	CFAP298 (ENSOARG00020001184) #29	SYNJ1 (ENSOARG00020000444) #30	PAXBP1 (ENSOARG00020000179) #31	C21orf62 (ENSOARG00020000147) #32	OLIG2 (ENSOARG00020000104)	OLIG1 (ENSOARG00020000100) #33	IFNAR2 (ENSOARG00020007396) #34	IL10RB (ENSOARG00020007337) #35	IFNAR1 (ENSOARG00020007172) #36	IFNGR2 (ENSOARG00020006717) #37
Atlantogenata	ANCESTRAL SPECIES	53	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000161951	ENSGT00940000162109.A	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Xenarthra	ANCESTRAL SPECIES	94		ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00390000001157.A.a	ENSGT00730000111511	ENSGT00730000111539	ENSGT00940000161951.gb	ENSGT00940000162756	ENSGT00940000162109.C	ENSGT00940000161951.fb	ENSGT01090000260513	ENSGT00530000064274 #19	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2557	ENSDNOG00000008617	ENSDNOG00000033513	ENSDNOG00000039923	ENSDNOG00000038940	ENSDNOG00000012983	ENSDNOG00000007184	ENSDNOG00000033998	ENSDNOG00000018697	ENSDNOG00000012039	ENSDNOG00000025182	KRTAP8-1 (ENSDNOG00000004675) #19	KRTAP7-1 (ENSDNOG00000038495)	KRTAP11-1 (ENSDNOG00000044842)	TIAM1 (ENSDNOG00000001110) #20	ENSDNOG00000034184	ENSDNOG00000041575 #22	SCAF4 (ENSDNOG00000019014) #23	HUNK (ENSDNOG00000039018) #24	ENSDNOG00000040477	MIS18A (ENSDNOG00000006027) #25	URB1 (ENSDNOG00000015586) #27	EVA1C (ENSDNOG00000024185) #28	CFAP298 (ENSDNOG00000008197) #29	SYNJ1 (ENSDNOG00000010732) #30	PAXBP1 (ENSDNOG00000012279) #31	C21orf62 (ENSDNOG00000042458) #32
Armadillo	MODERN SPECIES	4216	ENSDNOG00000010048	DDAH1 (ENSDNOG00000035701)	CCN1 (ENSDNOG00000002945)	ZNHIT6 (ENSDNOG00000044251)	COL24A1 (ENSDNOG00000016150)	ENSDNOG00000044659	ODF2L (ENSDNOG00000010680)	CLCA2 (ENSDNOG00000001152)	CLCA1 (ENSDNOG00000001155)	CLCA4 (ENSDNOG00000001159)	ENSDNOG00000040224	SH3GLB1 (ENSDNOG00000039119)	SELENOF (ENSDNOG00000004701)	HS2ST1 (ENSDNOG00000049698)	LMO4 (ENSDNOG00000047628)	ENSDNOG00000006512 #22
Afrotheria	ANCESTRAL SPECIES	57	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111539	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT01000000219199	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Afrotheria_a	ANCESTRAL SPECIES	54	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000162550 #13	ENSGT00940000159077	ENSGT00390000001157.A.a	ENSGT00860000134598	ENSGT00730000111539	ENSGT00390000015202	ENSGT00730000111463	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT00390000014210 #27	ENSGT01000000219199	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Elephant	DUPLICATION
Elephant	MODERN SPECIES	71	BACH1 (ENSLAFG00000029492) #11	GRIK1 (ENSLAFG00000000106) #12	CLDN17 (ENSLAFG00000018369) #13	CLDN8 (ENSLAFG00000029696)	KRTAP24-1 (ENSLAFG00000018033)	ENSLAFG00000029969	KRTAP27-1 (ENSLAFG00000014177)	ENSLAFG00000023209	ENSLAFG00000000979	ENSLAFG00000000976	ENSLAFG00000010373	ENSLAFG00000014806	KRTAP7-1 (ENSLAFG00000031172)	KRTAP11-1 (ENSLAFG00000000676)	TIAM1 (ENSLAFG00000000418) #20	ENSLAFG00000010708 #22	SCAF4 (ENSLAFG00000010710) #23	HUNK (ENSLAFG00000004577) #24	MIS18A (ENSLAFG00000013701) #25	MRAP (ENSLAFG00000010405) #26	URB1 (ENSLAFG00000010407) #27	ENSLAFG00000010309	CFAP298 (ENSLAFG00000011803) #29	SYNJ1 (ENSLAFG00000011806) #30	PAXBP1 (ENSLAFG00000012769) #31	C21orf62 (ENSLAFG00000030642) #32	OLIG2 (ENSLAFG00000028347)	OLIG1 (ENSLAFG00000007964) #33	IFNAR2 (ENSLAFG00000014030) #34	IL10RB (ENSLAFG00000014033) #35	IFNAR1 (ENSLAFG00000014039) #36
Elephant	MODERN SPECIES	503	PDILT (ENSLAFG00000001161)	ENSLAFG00000029667	ENSLAFG00000010811	ENSLAFG00000022957	ACSM4 (ENSLAFG00000027196)	THUMPD1 (ENSLAFG00000025838)	ACSM3 (ENSLAFG00000006155)	ERI2 (ENSLAFG00000023379)	REXO5 (ENSLAFG00000006157)	DCUN1D3 (ENSLAFG00000006161)	LYRM1 (ENSLAFG00000031222)	DNAH3 (ENSLAFG00000003029)	ZP2 (ENSLAFG00000015577)	ANKS4B (ENSLAFG00000015589)	CRYM (ENSLAFG00000015592)	ENSLAFG00000029609 #22	ENSLAFG00000022318	ENSLAFG00000032122	ENSLAFG00000003171	ENSLAFG00000029576	UQCRC2 (ENSLAFG00000015572)	PDZD9 (ENSLAFG00000030023)	MOSMO (ENSLAFG00000021436)	VWA3A (ENSLAFG00000008753)	SDR42E2 (ENSLAFG00000029286)	EEF2K (ENSLAFG00000022827)	POLR3E (ENSLAFG00000016743)	CDR2 (ENSLAFG00000003440)	METTL9 (ENSLAFG00000014306)	IGSF6 (ENSLAFG00000014310)	OTOA (ENSLAFG00000030589)
Hyrax	MODERN SPECIES	3119																ENSPCAG00000009970 #22	SCAF4 (ENSPCAG00000009998) #23
Tenrec	MODERN SPECIES	3803																SOD1 (ENSETEG00000000581) #22	SCAF4 (ENSETEG00000000583) #23
Marsupialia	ANCESTRAL SPECIES	23	ENSGT00940000157065	ENSGT00940000164632.b	ENSGT00390000015060	ENSGT00390000014606	ENSGT00940000161679	ENSGT00940000154497.B	ENSGT01100000263796	ENSGT00390000010669	ENSGT00940000154497.A	ENSGT00940000159870	ENSGT00940000159602	ENSGT00940000159255	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00390000003873	ENSGT00950000182836.b.b.b.a.a	ENSGT00390000011821.b	ENSGT00940000154826	ENSGT00390000003874	ENSGT00390000011821.a	ENSGT00390000008490	ENSGT00940000154989	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505	ENSGT00390000012196	ENSGT00390000012174
Marsupialia_b	DUPLICATION
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000157065	ENSGT00940000164632.b	ENSGT00390000015060	ENSGT00390000014606	ENSGT00940000161679	ENSGT00940000154497.B	ENSGT01100000263796	ENSGT00390000010669	ENSGT00940000154497.A	ENSGT00940000159870	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156294 #20	ENSGT00940000155551.c #22	ENSGT00530000063946.a #23	ENSGT00390000003873	ENSGT00940000160202	ENSGT00940000160662	ENSGT00990000203615.b.a.a.a.b	ENSGT01080000257365.b.a.b.a.a	ENSGT00940000157408	ENSGT00950000183064.b	ENSGT00940000154465.C	ENSGT00390000013771	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00550000074783 #9
Diprotodontia	ANCESTRAL SPECIES	47	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b	ENSGT00390000015060	ENSGT00390000014606	ENSGT00940000154497.B	ENSGT01100000263796	ENSGT00390000010669	ENSGT00940000154497.A	ENSGT00940000159870	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156294 #20	ENSGT00940000155551.c #22	ENSGT00530000063946.a #23	ENSGT00390000003873	ENSGT00940000160202	ENSGT00940000160662	ENSGT00990000203615.b.a.a.a.b	ENSGT01080000257365.b.a.b.a.a	ENSGT00940000157408	ENSGT00950000183064.b	ENSGT00940000154465.C	ENSGT00390000013771	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00550000074783 #9
Diprotodontia_a	ANCESTRAL SPECIES	44	ENSGT00390000013113	ENSGT00940000157065	ENSGT00940000164632.b	ENSGT00390000015060.a	ENSGT00390000014606	ENSGT00940000154497.B	ENSGT01100000263796	ENSGT00390000010669	ENSGT00940000154497.A	ENSGT00940000159870	ENSGT00940000159602	ENSGT00940000159255	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00940000156294 #20	ENSGT00940000155551.c #22	ENSGT00530000063946.a #23	ENSGT00390000003873	ENSGT00940000160202	ENSGT00940000160662	ENSGT00990000203615.b.a.a.a.b	ENSGT01080000257365.b.a.b.a.a	ENSGT00940000157408	ENSGT00950000183064.b	ENSGT00940000154465.C	ENSGT00390000013771	ENSGT00390000002429	ENSGT00390000001844.a.a	ENSGT00940000159353	ENSGT00940000157860	ENSGT00550000074783 #9
Common wonbat	MODERN SPECIES	1045	ENSVURG00010004486	ENSVURG00010004495	ENSVURG00010004505	ENSVURG00010004526	ENSVURG00010004532	C21orf140 (ENSVURG00010004540)	ENSVURG00010004544	RCAN1 (ENSVURG00010004550)	ENSVURG00010004605	RUNX1 (ENSVURG00010004671)	ENSVURG00010004739	ENSVURG00010004748	SETD4 (ENSVURG00010004756)	ENSVURG00010004777	TIAM1 (ENSVURG00010004803) #20	ENSVURG00010004902 #22	SCAF4 (ENSVURG00010004913) #23	TRAPPC10 (ENSVURG00010004938)	ETS2 (ENSVURG00010004972)	ERG (ENSVURG00010005031)	ENSVURG00010005062	KCNJ15 (ENSVURG00010005075)	KCNJ6 (ENSVURG00010005090)	DYRK1A (ENSVURG00010005101)	VPS26C (ENSVURG00010005140)	ENSVURG00010005159	PIGP (ENSVURG00010005196)	C21orf91 (ENSVURG00010005203)	CHODL (ENSVURG00010005219)	TMPRSS15 (ENSVURG00010005266)	NCAM2 (ENSVURG00010005455)
koala	MODERN SPECIES	61	KCNE2 (ENSPCIG00000008942)	ENSPCIG00000008941	C21orf140 (ENSPCIG00000008940)	KCNE1 (ENSPCIG00000008936)	RCAN1 (ENSPCIG00000008935)	ENSPCIG00000008934	RUNX1 (ENSPCIG00000008933)	ENSPCIG00000031436	ENSPCIG00000012826	ENSPCIG00000012831	ENSPCIG00000012832	SETD4 (ENSPCIG00000012833)	ENSPCIG00000033544	ENSPCIG00000035108	TIAM1 (ENSPCIG00000012837) #20	SOD1 (ENSPCIG00000028182) #22	SCAF4 (ENSPCIG00000028183) #23	TRAPPC10 (ENSPCIG00000011933)	ETS2 (ENSPCIG00000024682)	ERG (ENSPCIG00000022944)	KCNJ15 (ENSPCIG00000022948)	KCNJ6 (ENSPCIG00000009713)	DYRK1A (ENSPCIG00000022327)	VPS26C (ENSPCIG00000005411)	ENSPCIG00000020079	ENSPCIG00000030735	PIGP (ENSPCIG00000010155)	C21orf91 (ENSPCIG00000010157)	CHODL (ENSPCIG00000010159)	TMPRSS15 (ENSPCIG00000010163)	NCAM2 (ENSPCIG00000014144)
Wallaby	MODERN SPECIES	4941																ENSMEUG00000014766 #22
Tasmanian devil	MODERN SPECIES	2	CRYZL1 (ENSSHAG00000005975)	ITSN1 (ENSSHAG00000002428)	ATP5PO (ENSSHAG00000000409)	SLC5A3 (ENSSHAG00000031820)	KCNE2 (ENSSHAG00000001622)	ENSSHAG00000016273	C21orf140 (ENSSHAG00000016240)	KCNE1 (ENSSHAG00000031363)	RCAN1 (ENSSHAG00000016384)	ENSSHAG00000022481	RUNX1 (ENSSHAG00000014782)	ENSSHAG00000027118	SETD4 (ENSSHAG00000008853)	ENSSHAG00000008714	ENSSHAG00000007634 #20	ENSSHAG00000020925 #22	ENSSHAG00000001581 #23	ENSSHAG00000003843	ENSSHAG00000007055	ERG (ENSSHAG00000008486)	KCNJ15 (ENSSHAG00000022244)	ENSSHAG00000022321	KCNJ6 (ENSSHAG00000026648)	DYRK1A (ENSSHAG00000026536)	VPS26C (ENSSHAG00000013325)	ENSSHAG00000013708	ENSSHAG00000014284	ENSSHAG00000026194	CHODL (ENSSHAG00000005249)	TMPRSS15 (ENSSHAG00000005881)	ENSSHAG00000009183
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT00940000155551.d #22
Tasmanian devil	MODERN SPECIES		SLC14A2 (ENSSHAG00000016114)	SLC14A1 (ENSSHAG00000032087)	ENSSHAG00000016659	EPG5 (ENSSHAG00000016721)	PSTPIP2 (ENSSHAG00000017036)	ENSSHAG00000017177	HAUS1 (ENSSHAG00000030289)	C18orf25 (ENSSHAG00000017414)	RNF165 (ENSSHAG00000017805)	ENSSHAG00000017868	ST8SIA5 (ENSSHAG00000021657)	PIAS2 (ENSSHAG00000005954)	KATNAL2 (ENSSHAG00000003042)	HDHD2 (ENSSHAG00000024217)	SKOR2 (ENSSHAG00000025447)	ENSSHAG00000012107 #22	SMAD2 (ENSSHAG00000012837)	ZBTB7C (ENSSHAG00000024277)	CTIF (ENSSHAG00000027815)	SMAD7 (ENSSHAG00000017444)	DYM (ENSSHAG00000001181)	ENSSHAG00000030929	ENSSHAG00000003060	LIPG (ENSSHAG00000004911)	ACAA2 (ENSSHAG00000001241)	ENSSHAG00000003364	ENSSHAG00000010062	ENSSHAG00000026350	ENSSHAG00000010788	ENSSHAG00000013029	ENSSHAG00000008004
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00940000155551.d #22
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00940000155551.d #22
Common wonbat	MODERN SPECIES	1018	NCKAP1 (ENSVURG00010018153)	FRZB (ENSVURG00010018207)	DNAJC10 (ENSVURG00010018215)	PDE1A (ENSVURG00010018247)	ENSVURG00010018272	PPP1R1C (ENSVURG00010018283)	ITPRID2 (ENSVURG00010018289)	CERKL (ENSVURG00010018329)	ITGA4 (ENSVURG00010018355)	UBE2E3 (ENSVURG00010018376)	ENSVURG00010018397	ENSVURG00010018614	ZNF385B (ENSVURG00010018627)	SESTD1 (ENSVURG00010018662)	CCDC141 (ENSVURG00010018675)	ENSVURG00010018694 #22	ENSVURG00010018699	ENSVURG00010018702	ENSVURG00010018707	ENSVURG00010018717	ENSVURG00010018731	FKBP7 (ENSVURG00010018739)	PJVK (ENSVURG00010018750)	PRKRA (ENSVURG00010018771)	OSBPL6 (ENSVURG00010018808)	RBM45 (ENSVURG00010018862)	ENSVURG00010018867	PDE11A (ENSVURG00010018883)	ENSVURG00010018908	AGPS (ENSVURG00010018947)	ENSVURG00010019089
Opossum	MODERN SPECIES	3	ENSMODG00000039435	MRPS6 (ENSMODG00000021054)	ENSMODG00000027435	KCNE2 (ENSMODG00000025352)	ENSMODG00000046807	C21orf140 (ENSMODG00000025353)	KCNE1 (ENSMODG00000025354)	RCAN1 (ENSMODG00000021053)	ENSMODG00000041490	ENSMODG00000021052	RUNX1 (ENSMODG00000021051)	SETD4 (ENSMODG00000021048)	ENSMODG00000021047	ENSMODG00000050855	TIAM1 (ENSMODG00000021043) #20	SOD1 (ENSMODG00000021041) #22	SCAF4 (ENSMODG00000021040) #23	TRAPPC10 (ENSMODG00000021039)	AGPAT3 (ENSMODG00000021037)	ENSMODG00000051346	CSTB (ENSMODG00000021035)	PDXK (ENSMODG00000021034)	ENSMODG00000037340	RRP1B (ENSMODG00000021033)	HSF2BP (ENSMODG00000021032)	SIK1 (ENSMODG00000021031)	CRYAA (ENSMODG00000021030)	U2AF1 (ENSMODG00000029158)	CBS (ENSMODG00000021028)	PKNOX1 (ENSMODG00000021026)	ENSMODG00000021025
Platypus	MODERN SPECIES	8	ENSOANG00000020324	ENSOANG00000039154	ENSOANG00000041737	ENSOANG00000040587	ENSOANG00000041778	ENSOANG00000004383	ENSOANG00000004817	ENSOANG00000050864	ENSOANG00000037981	ENSOANG00000046154	ENSOANG00000039257	KRTAP20-2 (ENSOANG00000048857)	KRTAP8-1 (ENSOANG00000048155) #19	KRTAP7-1 (ENSOANG00000040530)	TIAM1 (ENSOANG00000044528) #20	ENSOANG00000050535 #22	SCAF4 (ENSOANG00000008438) #23	ENSOANG00000036875 #25	ENSOANG00000014694 #26	URB1 (ENSOANG00000050725) #27	EVA1C (ENSOANG00000001678) #28	CFAP298 (ENSOANG00000040755) #29	SYNJ1 (ENSOANG00000006929) #30	PAXBP1 (ENSOANG00000006928) #31	ENSOANG00000038158 #32	ENSOANG00000037359	ENSOANG00000047047	ENSOANG00000001422	CLDN8 (ENSOANG00000045624)	CLDN17 (ENSOANG00000040952) #13	GRIK1 (ENSOANG00000004652) #12
Sauria	ANCESTRAL SPECIES	2	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000162550 #13	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Archelosauria	ANCESTRAL SPECIES		ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000162550 #13	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Cryptodira	ANCESTRAL SPECIES		ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000162550 #13	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000156815	ENSGT00940000159090.a	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000162550 #13	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Testudinidae	ANCESTRAL SPECIES		ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090.a	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT01000000214979	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000162550 #13	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000156197.cb	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Abingdon island giant tortoise	MODERN SPECIES	2026												GRIK1 (ENSCABG00000019233) #12	ENSCABG00000019219	ENSCABG00000019218	TIAM1 (ENSCABG00000019212) #20	SOD1 (ENSCABG00000019208) #22	ENSCABG00000019206	ENSCABG00000019204	ENSCABG00000019203	HUNK (ENSCABG00000019199) #24	MIS18A (ENSCABG00000019198) #25	URB1 (ENSCABG00000019194) #27
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005001961	CYYR1 (ENSGEVG00005001949)	ADAMTS1 (ENSGEVG00005001837)	ADAMTS5 (ENSGEVG00005001773)	N6AMT1 (ENSGEVG00005001701)	LTN1 (ENSGEVG00005001657)	RWDD2B (ENSGEVG00005001631) #7	USP16 (ENSGEVG00005001540) #8	CCT8 (ENSGEVG00005001396) #9	ENSGEVG00005001378	BACH1 (ENSGEVG00005001367) #11	GRIK1 (ENSGEVG00005001006) #12	CLDN17 (ENSGEVG00005000767) #13	CLDN8 (ENSGEVG00005000760)	TIAM1 (ENSGEVG00005000612) #20	SOD1 (ENSGEVG00005000472) #22	ENSGEVG00005000429 #23	ENSGEVG00005000412	HUNK (ENSGEVG00005000385) #24	ENSGEVG00005000364	URB1 (ENSGEVG00005000249) #27	ENSGEVG00005000158	CFAP298 (ENSGEVG00005000093) #29	SYNJ1 (ENSGEVG00005000030) #30	PAXBP1 (ENSGEVG00005000005) #31	C21orf62 (ENSGEVG00005000002) #32	OLIG2 (ENSGEVG00005003880)	OLIG1 (ENSGEVG00005003873) #33	ENSGEVG00005003864 #34	IL10RB (ENSGEVG00005003840) #35	IFNAR1 (ENSGEVG00005003820) #36
Emydidae	ANCESTRAL SPECIES	28			ENSGT00390000013073.e	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000162550 #13	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	10					ENSTMTG00000020435	ENSTMTG00000020409	ENSTMTG00000020393 #7	ENSTMTG00000020337 #8	ENSTMTG00000020207 #9	ENSTMTG00000020180	ENSTMTG00000020176 #11	ENSTMTG00000019907 #12	ENSTMTG00000019876	ENSTMTG00000019872	ENSTMTG00000019799 #20	ENSTMTG00000019783 #22	SCAF4 (ENSTMTG00000019535) #23	ENSTMTG00000019490 #24	ENSTMTG00000019478 #25	ENSTMTG00000019471	ENSTMTG00000018002 #27	ENSTMTG00000017824	ENSTMTG00000017801 #29	ENSTMTG00000012582 #30	ENSTMTG00000011999 #31	ENSTMTG00000011989 #32	ENSTMTG00000011981	ENSTMTG00000011961 #33	ENSTMTG00000011937 #34	ENSTMTG00000011902 #35	ENSTMTG00000011799 #36
Three-toed box turtle	MODERN SPECIES	11					ENSTMTG00000020805	ENSTMTG00000020569	ENSTMTG00000020533 #7	ENSTMTG00000020479 #8	ENSTMTG00000020442 #9	MAP3K7CL (ENSTMTG00000020422) #10	ENSTMTG00000020416 #11	ENSTMTG00000020356 #12	CLDN17 (ENSTMTG00000020344) #13	ENSTMTG00000020340	ENSTMTG00000020286 #20	ENSTMTG00000020272 #22	ENSTMTG00000020244	ENSTMTG00000020228 #24	ENSTMTG00000020221 #25	ENSTMTG00000020219	ENSTMTG00000019967 #27	ENSTMTG00000019920	ENSTMTG00000019906 #29	ENSTMTG00000013030 #30	ENSTMTG00000012243 #31	ENSTMTG00000012221 #32	ENSTMTG00000012210	ENSTMTG00000012195 #33	ENSTMTG00000012170 #34	ENSTMTG00000012159 #35	ENSTMTG00000012138 #36
painted turtle	MODERN SPECIES	2425				N6AMT1 (ENSCPBG00000006708)	LTN1 (ENSCPBG00000006692)	RWDD2B (ENSCPBG00000006685) #7	USP16 (ENSCPBG00000006656) #8	CCT8 (ENSCPBG00000006647) #9	ENSCPBG00000006646	ENSCPBG00000006640	BACH1 (ENSCPBG00000006636) #11	GRIK1 (ENSCPBG00000006620) #12	ENSCPBG00000006611	CLDN8 (ENSCPBG00000006607)	TIAM1 (ENSCPBG00000006581) #20	SOD1 (ENSCPBG00000006568) #22	ENSCPBG00000006561	HUNK (ENSCPBG00000006541) #24	MIS18A (ENSCPBG00000006476) #25	ENSCPBG00000006469	URB1 (ENSCPBG00000006454) #27	ENSCPBG00000006446	CFAP298 (ENSCPBG00000006417) #29	ENSCPBG00000006414	SYNJ1 (ENSCPBG00000006402) #30	PAXBP1 (ENSCPBG00000005787) #31	C21orf62 (ENSCPBG00000005758) #32	OLIG2 (ENSCPBG00000005751)	OLIG1 (ENSCPBG00000005746) #33	ENSCPBG00000005740 #34	IL10RB (ENSCPBG00000005731) #35
Chinese turtle	MODERN SPECIES	1269							LTN1 (ENSPSIG00000017363)	RWDD2B (ENSPSIG00000017176) #7	USP16 (ENSPSIG00000017125) #8	CCT8 (ENSPSIG00000016718) #9	ENSPSIG00000016491	ENSPSIG00000016485	GRIK1 (ENSPSIG00000015431) #12	CLDN8 (ENSPSIG00000001990)	TIAM1 (ENSPSIG00000014519) #20	SOD1 (ENSPSIG00000014318) #22	SCAF4 (ENSPSIG00000014242) #23	HUNK (ENSPSIG00000014236) #24	ENSPSIG00000014098 #25	URB1 (ENSPSIG00000013889) #27	ENSPSIG00000013637	CFAP298 (ENSPSIG00000013627) #29	PAXBP1 (ENSPSIG00000013608) #31	C21orf62 (ENSPSIG00000001989) #32	OLIG2 (ENSPSIG00000001988)	ENSPSIG00000013150 #34	IL10RB (ENSPSIG00000012993) #35	IFNAR1 (ENSPSIG00000012446) #36	IFNGR2 (ENSPSIG00000012154) #37	TMEM50B (ENSPSIG00000012136)	DNAJC28 (ENSPSIG00000001987)
Archosauria	ANCESTRAL SPECIES	2	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Aves	ANCESTRAL SPECIES		ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
African ostrich	MODERN SPECIES	353			ADAMTS1 (ENSSCUG00000004336)	ADAMTS5 (ENSSCUG00000004333)	N6AMT1 (ENSSCUG00000004320)	LTN1 (ENSSCUG00000004317)	RWDD2B (ENSSCUG00000004316) #7	USP16 (ENSSCUG00000004315) #8	CCT8 (ENSSCUG00000004313) #9	ENSSCUG00000004310	BACH1 (ENSSCUG00000004309) #11	GRIK1 (ENSSCUG00000004307) #12	ENSSCUG00000004306	CLDN8 (ENSSCUG00000004305)	TIAM1 (ENSSCUG00000004300) #20	SOD1 (ENSSCUG00000004297) #22	SCAF4 (ENSSCUG00000004295) #23	HUNK (ENSSCUG00000004294) #24	ENSSCUG00000004292	URB1 (ENSSCUG00000004268) #27	ENSSCUG00000004249	CFAP298 (ENSSCUG00000004245) #29	ENSSCUG00000004243	SYNJ1 (ENSSCUG00000004235) #30	PAXBP1 (ENSSCUG00000004223) #31	C21orf62 (ENSSCUG00000004214) #32	ENSSCUG00000004210 #34	IL10RB (ENSSCUG00000004206) #35	IFNAR1 (ENSSCUG00000004204) #36	IFNGR2 (ENSSCUG00000004200) #37	TMEM50B (ENSSCUG00000004198)
Neognathae	ANCESTRAL SPECIES	1	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Neognathae_b	ANCESTRAL SPECIES		ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT00650000093475 #26	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36	ENSGT00940000160503 #37
Kakapo	MODERN SPECIES	11	APP (ENSSHBG00005004996)	CYYR1 (ENSSHBG00005005007)	ADAMTS1 (ENSSHBG00005005010)	ADAMTS5 (ENSSHBG00005005017)	N6AMT1 (ENSSHBG00005005026)	LTN1 (ENSSHBG00005005029)	RWDD2B (ENSSHBG00005005039) #7	USP16 (ENSSHBG00005005059) #8	CCT8 (ENSSHBG00005005139) #9	ENSSHBG00005005145	BACH1 (ENSSHBG00005005151) #11	GRIK1 (ENSSHBG00005005159) #12	ENSSHBG00005005170	CLDN8 (ENSSHBG00005005174)	TIAM1 (ENSSHBG00005005192) #20	SOD1 (ENSSHBG00005005258) #22	SCAF4 (ENSSHBG00005005308) #23	HUNK (ENSSHBG00005005413) #24	MIS18A (ENSSHBG00005005431) #25	ENSSHBG00005000652	URB1 (ENSSHBG00005000653) #27	EVA1C (ENSSHBG00005000654) #28	CFAP298 (ENSSHBG00005000655) #29	SYNJ1 (ENSSHBG00005000656) #30	PAXBP1 (ENSSHBG00005000657) #31	C21orf62 (ENSSHBG00005000659) #32	OLIG2 (ENSSHBG00005000660)	ENSSHBG00005000661 #34	IL10RB (ENSSHBG00005006196) #35	IFNAR1 (ENSSHBG00005006252) #36	IFNGR2 (ENSSHBG00005006267) #37
Golden eagle	MODERN SPECIES	23	APP (ENSACCG00020007693)	CYYR1 (ENSACCG00020004880)	ADAMTS1 (ENSACCG00020004899)	ADAMTS5 (ENSACCG00020004915)	N6AMT1 (ENSACCG00020004930)	LTN1 (ENSACCG00020004947)	RWDD2B (ENSACCG00020004960) #7	USP16 (ENSACCG00020004988) #8	CCT8 (ENSACCG00020005014) #9	ENSACCG00020005039	BACH1 (ENSACCG00020005048) #11	GRIK1 (ENSACCG00020005057) #12	ENSACCG00020005069	CLDN8 (ENSACCG00020005074)	TIAM1 (ENSACCG00020005088) #20	SOD1 (ENSACCG00020005106) #22	SCAF4 (ENSACCG00020005118) #23	HUNK (ENSACCG00020005135) #24	MIS18A (ENSACCG00020005146) #25	ENSACCG00020005154	URB1 (ENSACCG00020005176) #27	EVA1C (ENSACCG00020005195) #28	CFAP298 (ENSACCG00020005209) #29	SYNJ1 (ENSACCG00020005260) #30	PAXBP1 (ENSACCG00020005378) #31	C21orf62 (ENSACCG00020005441) #32	OLIG2 (ENSACCG00020005454)	ENSACCG00020005490 #34	IFNAR1 (ENSACCG00020005623) #36	IFNGR2 (ENSACCG00020005644) #37	TMEM50B (ENSACCG00020005662)
Passeriformes	ANCESTRAL SPECIES	24	ENSGT00390000004396	ENSGT00940000158967	ENSGT00950000182944.A	ENSGT00440000038181	ENSGT00940000153680.b	ENSGT00940000161241	ENSGT00940000163239	ENSGT00390000006450	ENSGT00940000155001.B	ENSGT00940000158353	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000158090	ENSGT00390000005948	ENSGT00960000187460	ENSGT00390000012955	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.b.a	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A	ENSGT00390000008610.a.a
Great tit	MODERN SPECIES		C2CD3 (ENSPMJG00000002786)	PPME1 (ENSPMJG00000002781)	P4HA3 (ENSPMJG00000002118)	NEU3 (ENSPMJG00000002108)	SPCS2 (ENSPMJG00000002098)	RNF169 (ENSPMJG00000002090)	CHRDL2 (ENSPMJG00000001802)	ENSPMJG00000001741	KCNE3 (ENSPMJG00000001739)	PGM2L1 (ENSPMJG00000001729)	SLCO2B1 (ENSPMJG00000001715)	ENSPMJG00000001713	GRIK1 (ENSPMJG00000001690) #12	CLDN8 (ENSPMJG00000001672)	TIAM1 (ENSPMJG00000001605) #20	SOD1 (ENSPMJG00000001552) #22	ENSPMJG00000001545	HUNK (ENSPMJG00000001540) #24	DNAJB13 (ENSPMJG00000001531)	PAAF1 (ENSPMJG00000001520)	ENSPMJG00000001509	MRPL48 (ENSPMJG00000001487)	RAB6A (ENSPMJG00000001471)	PLEKHB1 (ENSPMJG00000001431)	FAM168A (ENSPMJG00000001413)	RELT (ENSPMJG00000001399)	ARHGEF17 (ENSPMJG00000001318)	P2RY6 (ENSPMJG00000001311)	P2RY2 (ENSPMJG00000001310)	FCHSD2 (ENSPMJG00000001229)	ENSPMJG00000001079
Passeriformes_d	ANCESTRAL SPECIES	27	ENSGT00390000004396	ENSGT00940000158967	ENSGT00950000182944.A	ENSGT00440000038181	ENSGT00940000153680.b	ENSGT00940000161241	ENSGT00940000163239	ENSGT00390000006450	ENSGT00940000155001.B	ENSGT00940000158353	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000158090	ENSGT00390000005948	ENSGT00960000187460	ENSGT00390000012955	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.b.a	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A	ENSGT00390000008610.a.a
Flycatcher	MODERN SPECIES		EPHA6 (ENSFALG00000001647)	NSUN3 (ENSFALG00000027575)	ARL13B (ENSFALG00000001654)	STX19 (ENSFALG00000014778)	PROS1 (ENSFALG00000001657)	EPHA3 (ENSFALG00000001675)	ENSFALG00000028288	C3orf38 (ENSFALG00000001712)	ZNF654 (ENSFALG00000001715)	CGGBP1 (ENSFALG00000014795)	N6AMT1 (ENSFALG00000026052)	ENSFALG00000006681	ENSFALG00000006650	ENSFALG00000006623	ENSFALG00000006601	ENSFALG00000008092 #22	ENSFALG00000008076	ENSFALG00000008061 #24	DNAJB13 (ENSFALG00000008045)	PAAF1 (ENSFALG00000008025)	ENSFALG00000014549	MRPL48 (ENSFALG00000008015)	RAB6A (ENSFALG00000024542)	PLEKHB1 (ENSFALG00000028129)	FAM168A (ENSFALG00000008000)	RELT (ENSFALG00000023817)	ARHGEF17 (ENSFALG00000007976)	P2RY6 (ENSFALG00000007970)	P2RY2 (ENSFALG00000014521)	FCHSD2 (ENSFALG00000007968)	ENSFALG00000007956
Passeriformes_g	ANCESTRAL SPECIES	28	ENSGT00390000004396	ENSGT00940000158967	ENSGT00950000182944.A	ENSGT00440000038181	ENSGT00940000153680.b	ENSGT00940000161241	ENSGT00940000163239	ENSGT00390000006450	ENSGT00940000155001.B	ENSGT00940000158353	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000158090	ENSGT00390000005948	ENSGT00960000187460	ENSGT00390000012955	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.b.a	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A	ENSGT00390000008610.a.a
Medium ground finch	MODERN SPECIES	232														ENSGFOG00000003225	TIAM1 (ENSGFOG00000003044) #20	SOD1 (ENSGFOG00000003020) #22	SCAF4 (ENSGFOG00000002940) #23	HUNK (ENSGFOG00000002858) #24	DNAJB13 (ENSGFOG00000002842)	ENSGFOG00000002827	PAAF1 (ENSGFOG00000002813)	MRPL48 (ENSGFOG00000002796)	RAB6A (ENSGFOG00000002762)	PLEKHB1 (ENSGFOG00000002731)	FAM168A (ENSGFOG00000002717)	ARHGEF17 (ENSGFOG00000002604)	P2RY6 (ENSGFOG00000002581)	P2RY2 (ENSGFOG00000002528)	FCHSD2 (ENSGFOG00000002407)	ENSGFOG00000002047	SERPINH1 (ENSGFOG00000002005)
Passeroidea	ANCESTRAL SPECIES	30	ENSGT00390000004396	ENSGT00940000158967	ENSGT00950000182944.A	ENSGT00440000038181	ENSGT00940000153680.b	ENSGT00940000161241	ENSGT00940000163239	ENSGT00390000006450	ENSGT00940000155001.B	ENSGT00940000158353	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT01010000222551	ENSGT00940000161070 #24	ENSGT00940000158090	ENSGT00390000005948	ENSGT00960000187460	ENSGT00390000012955	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.b.a	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A	ENSGT00390000008610.a.a
Zebra finch	MODERN SPECIES		NEU3 (ENSTGUG00000021465)	SPCS2 (ENSTGUG00000026426)	RNF169 (ENSTGUG00000013451)	ENSTGUG00000024778	CHRDL2 (ENSTGUG00000013452)	ENSTGUG00000013453	LIPT2 (ENSTGUG00000013454)	ENSTGUG00000024283	KCNE3 (ENSTGUG00000013455)	PGM2L1 (ENSTGUG00000013456)	ENSTGUG00000013457	SLCO2B1 (ENSTGUG00000013458)	GRIK1 (ENSTGUG00000013459) #12	CLDN8 (ENSTGUG00000013460)	TIAM1 (ENSTGUG00000013461) #20	SOD1 (ENSTGUG00000013463) #22	ENSTGUG00000013464	HUNK (ENSTGUG00000013465) #24	DNAJB13 (ENSTGUG00000013466)	PAAF1 (ENSTGUG00000013467)	ENSTGUG00000013468	MRPL48 (ENSTGUG00000013469)	RAB6A (ENSTGUG00000013470)	PLEKHB1 (ENSTGUG00000013472)	FAM168A (ENSTGUG00000023375)	RELT (ENSTGUG00000013475)	ARHGEF17 (ENSTGUG00000013476)	P2RY6 (ENSTGUG00000013477)	P2RY2 (ENSTGUG00000013478)	SERPINH1 (ENSTGUG00000013481)	FCHSD2 (ENSTGUG00000013479)
Common canary	MODERN SPECIES	19	C2CD3 (ENSSCAG00000013358)	PPME1 (ENSSCAG00000013383)	P4HA3 (ENSSCAG00000013395)	SPCS2 (ENSSCAG00000013418)	RNF169 (ENSSCAG00000013419)	CHRDL2 (ENSSCAG00000013428)	ENSSCAG00000013441	ENSSCAG00000013451	KCNE3 (ENSSCAG00000013454)	PGM2L1 (ENSSCAG00000013458)	SLCO2B1 (ENSSCAG00000013469)	ENSSCAG00000013474	GRIK1 (ENSSCAG00000013503) #12	CLDN8 (ENSSCAG00000013634)	TIAM1 (ENSSCAG00000013654) #20	SOD1 (ENSSCAG00000013812) #22	ENSSCAG00000013816	HUNK (ENSSCAG00000013828) #24	DNAJB13 (ENSSCAG00000013841)	PAAF1 (ENSSCAG00000013849)	ENSSCAG00000013854	MRPL48 (ENSSCAG00000013857)	RAB6A (ENSSCAG00000013861)	PLEKHB1 (ENSSCAG00000013864)	FAM168A (ENSSCAG00000013866)	RELT (ENSSCAG00000013871)	ARHGEF17 (ENSSCAG00000013879)	P2RY6 (ENSSCAG00000000126)	P2RY2 (ENSSCAG00000000139)	FCHSD2 (ENSSCAG00000000151)	ENSSCAG00000000191
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Phasianidae	ANCESTRAL SPECIES		ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253.d #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964.c #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36	ENSGT00940000160503 #37
Japanese quail	MODERN SPECIES		ENSCJPG00005004707	CYYR1 (ENSCJPG00005004709)	ADAMTS1 (ENSCJPG00005004712)	ADAMTS5 (ENSCJPG00005004720)	N6AMT1 (ENSCJPG00005004732)	LTN1 (ENSCJPG00005004734)	RWDD2B (ENSCJPG00005004743) #7	USP16 (ENSCJPG00005004746) #8	CCT8 (ENSCJPG00005004846) #9	ENSCJPG00005004856	BACH1 (ENSCJPG00005004860) #11	GRIK1 (ENSCJPG00005004862) #12	ENSCJPG00005004892	CLDN8 (ENSCJPG00005004895)	TIAM1 (ENSCJPG00005004897) #20	SOD1 (ENSCJPG00005005140) #22	SCAF4 (ENSCJPG00005005142) #23	HUNK (ENSCJPG00005005154) #24	MIS18A (ENSCJPG00005005158) #25	ENSCJPG00005005161	URB1 (ENSCJPG00005005198) #27	EVA1C (ENSCJPG00005005210) #28	CFAP298 (ENSCJPG00005005211) #29	SYNJ1 (ENSCJPG00005005212) #30	PAXBP1 (ENSCJPG00005005407) #31	C21orf62 (ENSCJPG00005005459) #32	OLIG2 (ENSCJPG00005005461)	ENSCJPG00005005490 #34	IL10RB (ENSCJPG00005005496) #35	IFNAR1 (ENSCJPG00005005509) #36	IFNGR2 (ENSCJPG00005005552) #37
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253.d #12	ENSGT00940000159077.b	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964.c #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36	ENSGT00940000160503 #37
Chicken	MODERN SPECIES		GABPA (ENSGALG00010010887)	APP (ENSGALG00010010915)	CYYR1 (ENSGALG00010010931)	ADAMTS1 (ENSGALG00010010659)	ADAMTS5 (ENSGALG00010010712)	N6AMT1 (ENSGALG00010009831)	LTN1 (ENSGALG00010009868)	RWDD2B (ENSGALG00010009914) #7	USP16 (ENSGALG00010009985) #8	CCT8 (ENSGALG00010010077) #9	MAP3K7CL (ENSGALG00010011586)	BACH1 (ENSGALG00010011622) #11	GRIK1 (ENSGALG00010011636) #12	CLDN8 (ENSGALG00010011654)	TIAM1 (ENSGALG00010011699) #20	SOD1 (ENSGALG00010011746) #22	SCAF4 (ENSGALG00010011797) #23	HUNK (ENSGALG00010010271) #24	MIS18A (ENSGALG00010010274) #25	ENSGALG00010010285	URB1 (ENSGALG00010010305) #27	EVA1C (ENSGALG00010010405) #28	C21orf59 (ENSGALG00010010423) #29	SYNJ1 (ENSGALG00010010534) #30	PAXBP1 (ENSGALG00010010575) #31	C21orf62 (ENSGALG00010010633) #32	OLIG2 (ENSGALG00010010227)	IFNAR2 (ENSGALG00010010156) #34	IL10RB (ENSGALG00010010253) #35	IFNAR1 (ENSGALG00010012049) #36	IFNGR2 (ENSGALG00010012077) #37
Turkey	MODERN SPECIES		ENSMGAG00000014518 #36	ENSMGAG00000021643	ENSMGAG00000014519 #35	ENSMGAG00000014520 #34	ENSMGAG00000016135 #32	ENSMGAG00000014521 #31	ENSMGAG00000022007 #30	ENSMGAG00000018601	ENSMGAG00000014522 #30	ENSMGAG00000014523 #28	ENSMGAG00000014517 #29	ENSMGAG00000014512 #27	ENSMGAG00000014514 #25	ENSMGAG00000018693	ENSMGAG00000014513 #24	ENSMGAG00000014516 #22	ENSMGAG00000014515 #23	ENSMGAG00000014511 #20	CLDN8 (ENSMGAG00000016126)	ENSMGAG00000016122	GRIK1 (ENSMGAG00000014509) #12	BACH1 (ENSMGAG00000014508) #11	ENSMGAG00000017623	CCT8 (ENSMGAG00000014505) #9	USP16 (ENSMGAG00000014504) #8	RWDD2B (ENSMGAG00000021192) #7	LTN1 (ENSMGAG00000014502)	ENSMGAG00000014501	ENSMGAG00000020050	ADAMTS5 (ENSMGAG00000014499)	ADAMTS1 (ENSMGAG00000014497)
Anatidae	ANCESTRAL SPECIES	6	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT01000000219273	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Pink-footed goose	MODERN SPECIES	161											ENSABRG00000014710	BACH1 (ENSABRG00000014718) #11	GRIK1 (ENSABRG00000014734) #12	CLDN8 (ENSABRG00000014755)	TIAM1 (ENSABRG00000014761) #20	SOD1 (ENSABRG00000014784) #22	SCAF4 (ENSABRG00000014786) #23	HUNK (ENSABRG00000014790) #24	MIS18A (ENSABRG00000014795) #25	URB1 (ENSABRG00000014818) #27	ENSABRG00000015064	CFAP298 (ENSABRG00000015139) #29	SYNJ1 (ENSABRG00000015188) #30	PAXBP1 (ENSABRG00000015509) #31	ENSABRG00000015520	ENSABRG00000015530	C21orf62 (ENSABRG00000015552) #32	OLIG2 (ENSABRG00000015558)	ENSABRG00000015569	ENSABRG00000015574 #34	IL10RB (ENSABRG00000015588) #35
Duck	MODERN SPECIES	3389																SOD1 (ENSAPLG00000029333) #22
Australian saltwater crocodile	MODERN SPECIES	27	APP (ENSCPRG00005013421)	ADAMTS1 (ENSCPRG00005013434)	ADAMTS5 (ENSCPRG00005013460)	N6AMT1 (ENSCPRG00005013488)	LTN1 (ENSCPRG00005013498)	RWDD2B (ENSCPRG00005013565) #7	USP16 (ENSCPRG00005013579) #8	CCT8 (ENSCPRG00005013638) #9	ENSCPRG00005013704	ENSCPRG00005013709	BACH1 (ENSCPRG00005013728) #11	GRIK1 (ENSCPRG00005013772) #12	ENSCPRG00005013959	CLDN8 (ENSCPRG00005013960)	TIAM1 (ENSCPRG00005013974) #20	SOD1 (ENSCPRG00005013987) #22	SCAF4 (ENSCPRG00005013993) #23	HUNK (ENSCPRG00005014007) #24	MIS18A (ENSCPRG00005014010) #25	URB1 (ENSCPRG00005014101) #27	EVA1C (ENSCPRG00005014425) #28	CFAP298 (ENSCPRG00005014434) #29	SYNJ1 (ENSCPRG00005014469) #30	PAXBP1 (ENSCPRG00005014480) #31	C21orf62 (ENSCPRG00005014492) #32	ENSCPRG00005014507 #35	IFNAR1 (ENSCPRG00005014514) #36	IFNGR2 (ENSCPRG00005014541) #37	TMEM50B (ENSCPRG00005014547)	DNAJC28 (ENSCPRG00005014551)	ENSCPRG00005014597
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00530000063252.a.b	ENSGT00500000044986	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34
tuatara	DUPLICATION
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1569						N6AMT1 (ENSSPUG00000011186)	LTN1 (ENSSPUG00000011232)	RWDD2B (ENSSPUG00000011256) #7	USP16 (ENSSPUG00000011270) #8	CCT8 (ENSSPUG00000011304) #9	ENSSPUG00000011387	BACH1 (ENSSPUG00000011409) #11	GRIK1 (ENSSPUG00000011569) #12	CLDN8 (ENSSPUG00000012225)	TIAM1 (ENSSPUG00000012240) #20	ENSSPUG00000012272 #22	ENSSPUG00000012294	HUNK (ENSSPUG00000012338) #24	MIS18A (ENSSPUG00000012399) #25	ENSSPUG00000012424	URB1 (ENSSPUG00000012447) #27	ENSSPUG00000012497	CFAP298 (ENSSPUG00000012531) #29	SYNJ1 (ENSSPUG00000012552) #30	PAXBP1 (ENSSPUG00000012587) #31	OLIG2 (ENSSPUG00000012607)	IL10RB (ENSSPUG00000012625) #35	IFNAR1 (ENSSPUG00000012631) #36	IFNGR2 (ENSSPUG00000012647) #37	TMEM50B (ENSSPUG00000012662)	DNAJC28 (ENSSPUG00000012676)
tuatara	MODERN SPECIES	74				ENSSPUG00000011682	ENSSPUG00000011696	ENSSPUG00000011704	ENSSPUG00000011713	DIS3 (ENSSPUG00000011738)	PIBF1 (ENSSPUG00000011859)	KLF5 (ENSSPUG00000011885)	KLF12 (ENSSPUG00000011898)	TBC1D4 (ENSSPUG00000011919)	COMMD6 (ENSSPUG00000011934)	UCHL3 (ENSSPUG00000011947)	LMO7 (ENSSPUG00000011972)	ENSSPUG00000012004 #22	ENSSPUG00000012021
tuatara	MODERN SPECIES	699					IMPG2 (ENSSPUG00000018646)	SENP7 (ENSSPUG00000018566)	ENSSPUG00000018509	TXNL4B (ENSSPUG00000018503)	TRMT10C (ENSSPUG00000018495)	PCNP (ENSSPUG00000018491)	ZBTB11 (ENSSPUG00000018482)	RPL24 (ENSSPUG00000018475)	CEP97 (ENSSPUG00000018450)	NXPE3 (ENSSPUG00000018418)	NFKBIZ (ENSSPUG00000018407)	ENSSPUG00000018402 #22	ZPLD1 (ENSSPUG00000018398)
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Laterata	ANCESTRAL SPECIES		ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00770000120675 #10	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000162103 #28	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35	ENSGT00940000158406 #36
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES		GABPA (ENSSMRG00000023092)	APP (ENSSMRG00000023091)	ADAMTS1 (ENSSMRG00000023089)	ADAMTS5 (ENSSMRG00000023088)	N6AMT1 (ENSSMRG00000023085)	LTN1 (ENSSMRG00000023084)	RWDD2B (ENSSMRG00000023083) #7	USP16 (ENSSMRG00000023082) #8	CCT8 (ENSSMRG00000023081) #9	ENSSMRG00000023080	BACH1 (ENSSMRG00000023078) #11	ENSSMRG00000023077	GRIK1 (ENSSMRG00000023075) #12	CLDN8 (ENSSMRG00000023073)	TIAM1 (ENSSMRG00000023072) #20	ENSSMRG00000023071 #22	SCAF4 (ENSSMRG00000023069) #23	HUNK (ENSSMRG00000023068) #24	ENSSMRG00000023067	MIS18A (ENSSMRG00000023066) #25	ENSSMRG00000023065	URB1 (ENSSMRG00000023064) #27	EVA1C (ENSSMRG00000023063) #28	CFAP298 (ENSSMRG00000023062) #29	SYNJ1 (ENSSMRG00000023061) #30	PAXBP1 (ENSSMRG00000023060) #31	C21orf62 (ENSSMRG00000023059) #32	OLIG2 (ENSSMRG00000023058)	OLIG1 (ENSSMRG00000023057) #33	ENSSMRG00000023056 #34	IL10RB (ENSSMRG00000023055) #35
Argentine black and white tegu	MODERN SPECIES	73	ORMDL2 (ENSSMRG00000005073)	KMT2D (ENSSMRG00000005092)	RHEBL1 (ENSSMRG00000005440)	DHH (ENSSMRG00000005456)	LMBR1L (ENSSMRG00000005473)	ENSSMRG00000005477	ENSSMRG00000005481	ENSSMRG00000005482	PRPH (ENSSMRG00000005483)	C1QL4 (ENSSMRG00000005513)	DNAJC22 (ENSSMRG00000005516)	SPATS2 (ENSSMRG00000005527)	ENSSMRG00000005532	KCNH3 (ENSSMRG00000005537)	MCRS1 (ENSSMRG00000005622)	ENSSMRG00000005634 #22	ITGA7 (ENSSMRG00000005635)	BLOC1S1 (ENSSMRG00000005648)	RDH5 (ENSSMRG00000005649)	CD63 (ENSSMRG00000005674)	ZNF207 (ENSSMRG00000005675)	C17orf75 (ENSSMRG00000005678)	RHBDL3 (ENSSMRG00000005691)	RHOT1 (ENSSMRG00000005714)	ENSSMRG00000005729	TEFM (ENSSMRG00000005734)	ENSSMRG00000005738	ENSSMRG00000005743	CRLF3 (ENSSMRG00000005752)	SUZ12 (ENSSMRG00000005840)	UTP6 (ENSSMRG00000005854)
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000002978	ADAMTS5 (ENSPMRG00000002986)	ENSPMRG00000002995	N6AMT1 (ENSPMRG00000003013)	LTN1 (ENSPMRG00000003160)	RWDD2B (ENSPMRG00000003498) #7	USP16 (ENSPMRG00000003505) #8	CCT8 (ENSPMRG00000003519) #9	MAP3K7CL (ENSPMRG00000003530) #10	BACH1 (ENSPMRG00000003539) #11	GRIK1 (ENSPMRG00000003621) #12	ENSPMRG00000003863	ENSPMRG00000003865	CLDN8 (ENSPMRG00000003869)	TIAM1 (ENSPMRG00000003876) #20	SOD1 (ENSPMRG00000003896) #22	ENSPMRG00000003911 #23	ENSPMRG00000003958 #23	ENSPMRG00000003977	HUNK (ENSPMRG00000003983) #24	MIS18A (ENSPMRG00000003990) #25	URB1 (ENSPMRG00000004133) #27	EVA1C (ENSPMRG00000004770) #28	CFAP298 (ENSPMRG00000004775) #29	SYNJ1 (ENSPMRG00000004826) #30	PAXBP1 (ENSPMRG00000005024) #31	C21orf62 (ENSPMRG00000005033) #32	ENSPMRG00000005037	OLIG2 (ENSPMRG00000018773)	OLIG1 (ENSPMRG00000018776) #33	ENSPMRG00000018779 #34
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Lizard	MODERN SPECIES	2	ENSACAG00000044942	ENSACAG00000001341	LTN1 (ENSACAG00000001346)	RWDD2B (ENSACAG00000001560) #7	USP16 (ENSACAG00000001581) #8	CCT8 (ENSACAG00000001784) #9	ENSACAG00000041537	ENSACAG00000035443	ENSACAG00000001970	BACH1 (ENSACAG00000001974) #11	GRIK1 (ENSACAG00000002026) #12	ENSACAG00000021113	CLDN8 (ENSACAG00000002394)	ENSACAG00000040642	TIAM1 (ENSACAG00000022492) #20	SOD1 (ENSACAG00000002543) #22	ENSACAG00000002569	ENSACAG00000037328	HUNK (ENSACAG00000002743) #24	MIS18A (ENSACAG00000002814) #25	URB1 (ENSACAG00000002817) #27	ENSACAG00000002914	CFAP298 (ENSACAG00000002935) #29	SYNJ1 (ENSACAG00000003006) #30	PAXBP1 (ENSACAG00000003196) #31	C21orf62 (ENSACAG00000003249) #32	ENSACAG00000043349	ENSACAG00000034834	GALNT7 (ENSACAG00000005432)	HMGB2 (ENSACAG00000005480)	SAP30 (ENSACAG00000005497)
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923 #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00940000179662	ENSGT00390000000455.a #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00510000049322 #34	ENSGT00940000158231 #35
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923.c #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a.e #31	ENSGT00940000179662	ENSGT00390000000455.a.f #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00940000158231 #35
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00940000155799	ENSGT00530000063252.a.b	ENSGT00940000156815	ENSGT00940000159090	ENSGT00390000013073	ENSGT00390000016055	ENSGT00390000007224.b #7	ENSGT00940000156013 #8	ENSGT00550000074783 #9	ENSGT00940000164659	ENSGT00940000158923.c #11	ENSGT00940000156253 #12	ENSGT00940000159077.b	ENSGT00940000159077.a	ENSGT00940000156294 #20	ENSGT00940000155551 #22	ENSGT00530000063946.a #23	ENSGT00940000161070 #24	ENSGT00940000154267.B #25	ENSGT01030000235126	ENSGT00390000014210 #27	ENSGT00940000163305.a.a	ENSGT00390000006278 #29	ENSGT00940000157964 #30	ENSGT00390000000455.a.e #31	ENSGT00940000179662	ENSGT00390000000455.a.f #31	ENSGT00390000016499 #32	ENSGT00940000161651	ENSGT00940000162722 #33	ENSGT00940000158231 #35
Mainland tiger snake	MODERN SPECIES	7	APP (ENSNSUG00000016870)	ADAMTS1 (ENSNSUG00000016930)	ADAMTS5 (ENSNSUG00000016931)	ENSNSUG00000016936	N6AMT1 (ENSNSUG00000016938)	LTN1 (ENSNSUG00000016939)	RWDD2B (ENSNSUG00000016940) #7	USP16 (ENSNSUG00000016941) #8	CCT8 (ENSNSUG00000017077) #9	ENSNSUG00000017078	BACH1 (ENSNSUG00000017079) #11	GRIK1 (ENSNSUG00000017080) #12	ENSNSUG00000017194	CLDN8 (ENSNSUG00000017195)	TIAM1 (ENSNSUG00000017196) #20	SOD1 (ENSNSUG00000017198) #22	SCAF4 (ENSNSUG00000017200) #23	HUNK (ENSNSUG00000017202) #24	MIS18A (ENSNSUG00000017204) #25	ENSNSUG00000017205	URB1 (ENSNSUG00000017208) #27	ENSNSUG00000017209	CFAP298 (ENSNSUG00000017210) #29	ENSNSUG00000017211 #30	ENSNSUG00000017213 #30	ENSNSUG00000017214	PAXBP1 (ENSNSUG00000017215) #31	C21orf62 (ENSNSUG00000017228) #32	OLIG2 (ENSNSUG00000017230)	OLIG1 (ENSNSUG00000017232) #33	IL10RB (ENSNSUG00000017234) #35
Eastern brown snake	MODERN SPECIES	14	GABPA (ENSPTXG00000004277)	APP (ENSPTXG00000004270)	ADAMTS1 (ENSPTXG00000004265)	ADAMTS5 (ENSPTXG00000004252)	N6AMT1 (ENSPTXG00000004244)	LTN1 (ENSPTXG00000004239)	RWDD2B (ENSPTXG00000004237) #7	USP16 (ENSPTXG00000004235) #8	CCT8 (ENSPTXG00000004231) #9	ENSPTXG00000004229	BACH1 (ENSPTXG00000004226) #11	GRIK1 (ENSPTXG00000001508) #12	ENSPTXG00000001460	CLDN8 (ENSPTXG00000001458)	TIAM1 (ENSPTXG00000001394) #20	SOD1 (ENSPTXG00000001382) #22	SCAF4 (ENSPTXG00000001368) #23	HUNK (ENSPTXG00000001361) #24	MIS18A (ENSPTXG00000001357) #25	URB1 (ENSPTXG00000001054) #27	ENSPTXG00000001003	CFAP298 (ENSPTXG00000000999) #29	SYNJ1 (ENSPTXG00000000990) #30	PAXBP1 (ENSPTXG00000000976) #31	C21orf62 (ENSPTXG00000000965) #32	OLIG1 (ENSPTXG00000000964) #33	IL10RB (ENSPTXG00000000961) #35	ENSPTXG00000000954 #36	IFNGR2 (ENSPTXG00000000949) #37	TMEM50B (ENSPTXG00000000943)	DNAJC28 (ENSPTXG00000000940)
Blue-lipped sea krait	MODERN SPECIES	10089																SOD1 (ENSLLTG00000012582) #22	ENSLLTG00000012603
Indian cobra	MODERN SPECIES	4	APP (ENSNNAG00000013512)	ADAMTS1 (ENSNNAG00000013364)	ADAMTS5 (ENSNNAG00000012982)	N6AMT1 (ENSNNAG00000012931)	LTN1 (ENSNNAG00000011210)	RWDD2B (ENSNNAG00000011086) #7	USP16 (ENSNNAG00000010640) #8	CCT8 (ENSNNAG00000010462) #9	ENSNNAG00000010400	BACH1 (ENSNNAG00000010365) #11	GRIK1 (ENSNNAG00000008076) #12	ENSNNAG00000007937	CLDN8 (ENSNNAG00000007926)	ENSNNAG00000007757 #20	ENSNNAG00000007698 #20	SOD1 (ENSNNAG00000007551) #22	SCAF4 (ENSNNAG00000007109) #23	HUNK (ENSNNAG00000007029) #24	MIS18A (ENSNNAG00000007014) #25	URB1 (ENSNNAG00000006901) #27	ENSNNAG00000006764	CFAP298 (ENSNNAG00000006728) #29	SYNJ1 (ENSNNAG00000006686) #30	PAXBP1 (ENSNNAG00000006624) #31	C21orf62 (ENSNNAG00000006604) #32	OLIG2 (ENSNNAG00000006591)	OLIG1 (ENSNNAG00000006561) #33	ENSNNAG00000006546 #34	IL10RB (ENSNNAG00000006531) #35	ENSNNAG00000006517 #36	ENSNNAG00000006504 #37