Mus	ANCESTRAL SPECIES	4	ENSGT00950000182989.A #8	ENSGT00940000175407	ENSGT00940000157327 #9	ENSGT00940000160977 #10	ENSGT00390000000096.b.a #11	ENSGT00940000158020 #12	ENSGT00840000129915 #13	ENSGT00390000003488.a.a #14	ENSGT00940000159782 #15	ENSGT01100000263709 #16	ENSGT00390000015655.a #17	ENSGT00940000159933 #18	ENSGT00940000156648 #19	ENSGT01030000234626.E #20	ENSGT00390000012388 #21	ENSGT00670000098061 #22	ENSGT00510000048394 #23	ENSGT00940000159028 #24	ENSGT00390000011087 #25	ENSGT00550000074980 #26	ENSGT00390000012905 #27	ENSGT00940000158397 #28	ENSGT01090000260082.d.a.b #29	ENSGT00940000156916 #30	ENSGT00940000154633 #31	ENSGT00390000000586 #32	ENSGT00420000030454 #33	ENSGT00390000017499 #34	ENSGT00390000003661 #35	ENSGT00950000182952.A.a #37	ENSGT00390000002677 #36
Mus_A	ANCESTRAL SPECIES	4	ENSGT00950000182989.A #8	ENSGT00940000175407	ENSGT00940000157327 #9	ENSGT00940000160977 #10	ENSGT00390000000096.b.a #11	ENSGT00940000158020 #12	ENSGT00840000129915 #13	ENSGT00390000003488.a.a #14	ENSGT00940000159782 #15	ENSGT01100000263709 #16	ENSGT00390000015655.a #17	ENSGT00940000159933 #18	ENSGT00940000156648 #19	ENSGT01030000234626.E #20	ENSGT00390000012388 #21	ENSGT00670000098061 #22	ENSGT00510000048394 #23	ENSGT00940000159028 #24	ENSGT00390000011087 #25	ENSGT00550000074980 #26	ENSGT00390000012905 #27	ENSGT00940000158397 #28	ENSGT01090000260082.d.a.b #29	ENSGT00940000156916 #30	ENSGT00940000154633 #31	ENSGT00390000000586 #32	ENSGT00420000030454 #33	ENSGT00390000017499 #34	ENSGT00390000003661 #35	ENSGT00950000182952.A.a #37	ENSGT00390000002677 #36
Mus_B	ANCESTRAL SPECIES	3	ENSGT00950000182989.A #8	ENSGT00940000175407	ENSGT00940000157327 #9	ENSGT00940000160977 #10	ENSGT00390000000096.b.a #11	ENSGT00940000158020 #12	ENSGT00840000129915 #13	ENSGT00390000003488.a.a #14	ENSGT00940000159782 #15	ENSGT01100000263709 #16	ENSGT00390000015655.a #17	ENSGT00940000159933 #18	ENSGT00940000156648 #19	ENSGT01030000234626.E #20	ENSGT00390000012388 #21	ENSGT00670000098061 #22	ENSGT00510000048394 #23	ENSGT00940000159028 #24	ENSGT00390000011087 #25	ENSGT00550000074980 #26	ENSGT00390000012905 #27	ENSGT00940000158397 #28	ENSGT01090000260082.d.a.b #29	ENSGT00940000156916 #30	ENSGT00940000154633 #31	ENSGT00390000000586 #32	ENSGT00420000030454 #33	ENSGT00390000017499 #34	ENSGT00390000003661 #35	ENSGT00950000182952.A.a #37	ENSGT00390000002677 #36
Mouse	MODERN SPECIES	18	Acsbg1 (ENSMUSG00000032281) #7	Idh3a (ENSMUSG00000032279) #8	Cib2 (ENSMUSG00000037493) #9	Sh2d7 (ENSMUSG00000046460) #10	Dmxl2 (ENSMUSG00000041268) #11	Gldn (ENSMUSG00000046167) #12	Cyp19a1 (ENSMUSG00000032274) #13	Tnfaip8l3 (ENSMUSG00000074345) #14	Elmod1 (ENSMUSG00000041986) #15	Sln (ENSMUSG00000042045) #16	Slc35f2 (ENSMUSG00000042195) #17	Rab39 (ENSMUSG00000055069) #18	Cul5 (ENSMUSG00000032030) #19	Acat1 (ENSMUSG00000032047) #20	Npat (ENSMUSG00000033054) #21	Atm (ENSMUSG00000034218) #22	4930550C14Rik (ENSMUSG00000005131) #23	Poglut3 (ENSMUSG00000034487) #24	Exph5 (ENSMUSG00000034584) #25	Ddx10 (ENSMUSG00000053289) #26	AI593442 (ENSMUSG00000078307) #27	Zc3h12c (ENSMUSG00000035164) #28	Rdx (ENSMUSG00000032050) #29	Fdx1 (ENSMUSG00000032051) #30	Arhgap20 (ENSMUSG00000053199) #31	Pou2af2 (ENSMUSG00000036027) #32	Pou2af3 (ENSMUSG00000079559) #33	Pou2af1 (ENSMUSG00000032053) #34	Gm32742 (ENSMUSG00000110266) #35	Hoatz (ENSMUSG00000032057) #36	Btg4 (ENSMUSG00000032056) #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00950000182989.A #8	ENSGT00940000175407	ENSGT00940000157327 #9	ENSGT00940000160977 #10	ENSGT00390000000096.b.a #11	ENSGT00940000158020 #12	ENSGT00840000129915 #13	ENSGT00390000003488.a.a #14	ENSGT00940000159782 #15	ENSGT01100000263709 #16	ENSGT00390000015655.a #17	ENSGT00940000159933 #18	ENSGT00940000156648 #19	ENSGT01030000234626.E #20	ENSGT00390000012388 #21	ENSGT00670000098061 #22	ENSGT00510000048394 #23	ENSGT00940000159028 #24	ENSGT00390000011087 #25	ENSGT00550000074980 #26	ENSGT00390000012905 #27	ENSGT00940000158397 #28	ENSGT01090000260082.d.a.b #29	ENSGT00940000156916 #30	ENSGT00940000154633 #31	ENSGT00390000000586 #32	ENSGT00420000030454 #33	ENSGT00390000017499 #34	ENSGT00390000003661 #35	ENSGT00950000182952.A.a #37	ENSGT00390000002677 #36
spretus	MODERN SPECIES	18	Acsbg1 (MGP_SPRETEiJ_G0033371) #7	Idh3a (MGP_SPRETEiJ_G0033370) #8	Cib2 (MGP_SPRETEiJ_G0033369) #9	MGP_SPRETEiJ_G0033368 #10	Dmxl2 (MGP_SPRETEiJ_G0033367) #11	Gldn (MGP_SPRETEiJ_G0033366) #12	Cyp19a1 (MGP_SPRETEiJ_G0033365) #13	Tnfaip8l3 (MGP_SPRETEiJ_G0033364) #14	Elmod1 (MGP_SPRETEiJ_G0033363) #15	Sln (MGP_SPRETEiJ_G0033362) #16	Slc35f2 (MGP_SPRETEiJ_G0033361) #17	Rab39 (MGP_SPRETEiJ_G0033360) #18	Cul5 (MGP_SPRETEiJ_G0033359) #19	Acat1 (MGP_SPRETEiJ_G0033358) #20	Npat (MGP_SPRETEiJ_G0033357) #21	MGP_SPRETEiJ_G0033356 #22	4930550C14Rik (MGP_SPRETEiJ_G0033355) #23	Poglut3 (MGP_SPRETEiJ_G0033354) #24	Exph5 (MGP_SPRETEiJ_G0033353) #25	Ddx10 (MGP_SPRETEiJ_G0033352) #26	AI593442 (MGP_SPRETEiJ_G0033351) #27	Zc3h12c (MGP_SPRETEiJ_G0033350) #28	Rdx (MGP_SPRETEiJ_G0033349) #29	Fdx1 (MGP_SPRETEiJ_G0033348) #30	Arhgap20 (MGP_SPRETEiJ_G0033347) #31	MGP_SPRETEiJ_G0033346	Pou2af2 (MGP_SPRETEiJ_G0033345) #32	Pou2af3 (MGP_SPRETEiJ_G0033344) #33	Pou2af1 (MGP_SPRETEiJ_G0033343) #34	Btg4 (MGP_SPRETEiJ_G0033342) #37	Hoatz (MGP_SPRETEiJ_G0033341) #36
Steppe mouse	MODERN SPECIES	3294	ENSMSIG00000003965 #8	ENSMSIG00000003928	Cib2 (ENSMSIG00000003889) #9	ENSMSIG00000003851 #10	Dmxl2 (ENSMSIG00000003612) #11	Gldn (ENSMSIG00000003561) #12	ENSMSIG00000003540	Cyp19a1 (ENSMSIG00000003500) #13	Tnfaip8l3 (ENSMSIG00000003481) #14	Elmod1 (ENSMSIG00000003422) #15	Sln (ENSMSIG00000003398) #16	Slc35f2 (ENSMSIG00000003375) #17	Rab39 (ENSMSIG00000003361) #18	ENSMSIG00000003120 #19	Npat (ENSMSIG00000003045) #21	Atm (ENSMSIG00000002482) #22	4930550C14Rik (ENSMSIG00000002342) #23	Poglut3 (ENSMSIG00000002258) #24	Exph5 (ENSMSIG00000002225) #25	ENSMSIG00000002169	ENSMSIG00000002160	Ddx10 (ENSMSIG00000002113) #26	ENSMSIG00000002094	AI593442 (ENSMSIG00000002076) #27	ENSMSIG00000002067	Zc3h12c (ENSMSIG00000023596) #28	Rdx (ENSMSIG00000023566) #29	ENSMSIG00000023562	Fdx1 (ENSMSIG00000023526) #30
Ryukyu mouse	MODERN SPECIES	18	Acsbg1 (MGP_CAROLIEiJ_G0032231) #7	Idh3a (MGP_CAROLIEiJ_G0032230) #8	Cib2 (MGP_CAROLIEiJ_G0032229) #9	MGP_CAROLIEiJ_G0032228 #10	Dmxl2 (MGP_CAROLIEiJ_G0032227) #11	Gldn (MGP_CAROLIEiJ_G0032226) #12	Cyp19a1 (MGP_CAROLIEiJ_G0032225) #13	Tnfaip8l3 (MGP_CAROLIEiJ_G0032224) #14	Elmod1 (MGP_CAROLIEiJ_G0032223) #15	Sln (MGP_CAROLIEiJ_G0032222) #16	Slc35f2 (MGP_CAROLIEiJ_G0032221) #17	Rab39 (MGP_CAROLIEiJ_G0032220) #18	Cul5 (MGP_CAROLIEiJ_G0032219) #19	Acat1 (MGP_CAROLIEiJ_G0032218) #20	Npat (MGP_CAROLIEiJ_G0032217) #21	Atm (MGP_CAROLIEiJ_G0032216) #22	4930550C14Rik (MGP_CAROLIEiJ_G0032215) #23	Poglut3 (MGP_CAROLIEiJ_G0032214) #24	Exph5 (MGP_CAROLIEiJ_G0032213) #25	Ddx10 (MGP_CAROLIEiJ_G0032212) #26	AI593442 (MGP_CAROLIEiJ_G0032211) #27	Zc3h12c (MGP_CAROLIEiJ_G0032210) #28	Rdx (MGP_CAROLIEiJ_G0032209) #29	Fdx1 (MGP_CAROLIEiJ_G0032208) #30	Arhgap20 (MGP_CAROLIEiJ_G0032207) #31	Pou2af2 (MGP_CAROLIEiJ_G0032206) #32	Pou2af3 (MGP_CAROLIEiJ_G0032205) #33	Pou2af1 (MGP_CAROLIEiJ_G0032204) #34	Btg4 (MGP_CAROLIEiJ_G0032203) #37	Hoatz (MGP_CAROLIEiJ_G0032202) #36	Layn (MGP_CAROLIEiJ_G0032201)
Shrew mouse	MODERN SPECIES	1	Acsbg1 (MGP_PahariEiJ_G0015099) #7	Idh3a (MGP_PahariEiJ_G0015098) #8	Cib2 (MGP_PahariEiJ_G0015097) #9	MGP_PahariEiJ_G0015096 #10	Dmxl2 (MGP_PahariEiJ_G0015095) #11	Gldn (MGP_PahariEiJ_G0015094) #12	Cyp19a1 (MGP_PahariEiJ_G0015093) #13	Tnfaip8l3 (MGP_PahariEiJ_G0015092) #14	Elmod1 (MGP_PahariEiJ_G0015091) #15	Sln (MGP_PahariEiJ_G0015090) #16	Slc35f2 (MGP_PahariEiJ_G0015089) #17	Rab39 (MGP_PahariEiJ_G0015088) #18	Cul5 (MGP_PahariEiJ_G0015087) #19	Acat1 (MGP_PahariEiJ_G0015086) #20	Npat (MGP_PahariEiJ_G0015085) #21	Atm (MGP_PahariEiJ_G0015084) #22	4930550C14Rik (MGP_PahariEiJ_G0015083) #23	Poglut3 (MGP_PahariEiJ_G0015082) #24	Exph5 (MGP_PahariEiJ_G0015081) #25	Ddx10 (MGP_PahariEiJ_G0015080) #26	AI593442 (MGP_PahariEiJ_G0015079) #27	Zc3h12c (MGP_PahariEiJ_G0015078) #28	Rdx (MGP_PahariEiJ_G0015077) #29	Fdx1 (MGP_PahariEiJ_G0015076) #30	Arhgap20 (MGP_PahariEiJ_G0015075) #31	MGP_PahariEiJ_G0015074 #32	Pou2af3 (MGP_PahariEiJ_G0015073) #33	Pou2af1 (MGP_PahariEiJ_G0015072) #34	Btg4 (MGP_PahariEiJ_G0015071) #37	Hoatz (MGP_PahariEiJ_G0015070) #36	Layn (MGP_PahariEiJ_G0015069)