Eutheria ANCESTRAL SPECIES 16 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT01100000263574.b.i.b ENSGT01100000263574.b.i.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360 ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000164188 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00530000063808.a ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Primates ANCESTRAL SPECIES 23 ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.a.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Haplorrhini ANCESTRAL SPECIES 33 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 Simiiformes ANCESTRAL SPECIES 9 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h.a ENSGT00410000025802.h.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00550000075071 ENSGT00510000049125 Catarrhini ANCESTRAL SPECIES 12 ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00550000075071 ENSGT00510000049125 Cercopithecidae ANCESTRAL SPECIES 37 ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Rhinopithecus ANCESTRAL SPECIES 835 ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3076 ENSRROG00000039413 #22 Golden snub-nosed monkey MODERN SPECIES 2520 VBP1 (ENSRROG00000043789) ##22 RAB39B (ENSRROG00000000340) CLIC2 (ENSRROG00000044913) Black snub-nosed monkey MODERN SPECIES 994 VBP1 (ENSRBIG00000035358) #22 RAB39B (ENSRBIG00000031945) Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 25 ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904.hb #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000000950.c.b.d.a.d ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904.hb #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Cercopithecinae_b ANCESTRAL SPECIES 66 ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000000950.c.b.d.a.d ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904.hb #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00510000047733 ENSGT00510000049125 Olive baboon MODERN SPECIES 792 RPL10 (ENSPANG00000008309) FLNA (ENSPANG00000025614) ENSPANG00000046902 SMIM9 (ENSPANG00000014914) MPP1 (ENSPANG00000013144) DKC1 (ENSPANG00000011978) GAB3 (ENSPANG00000004006) F8 (ENSPANG00000010602) FUNDC2 (ENSPANG00000004381) CMC4 (ENSPANG00000017783) MTCP1 (ENSPANG00000012244) BRCC3 (ENSPANG00000010904) RAB39B (ENSPANG00000008960) TMLHE (ENSPANG00000024415) CLIC2 (ENSPANG00000008414) VBP1 (ENSPANG00000029954) #22 VAMP7 (ENSPANG00000015780) IL9R (ENSPANG00000004380) Cercopithecinae_d ANCESTRAL SPECIES 196 ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000000950.c.b.d.a.d ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904.hb #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 Drill MODERN SPECIES 302 UPRT (ENSMLEG00000033879) ENSMLEG00000024646 ZDHHC15 (ENSMLEG00000034065) F8 (ENSMLEG00000034152) ENSMLEG00000023479 FUNDC2 (ENSMLEG00000037506) CMC4 (ENSMLEG00000003457) MTCP1 (ENSMLEG00000006517) BRCC3 (ENSMLEG00000028598) VBP1 (ENSMLEG00000022030) #22 ENSMLEG00000010058 RAB39B (ENSMLEG00000029019) CLIC2 (ENSMLEG00000035692) Sooty mangabey MODERN SPECIES 417 ENSCATG00000015388 ENSCATG00000015047 IKBKG (ENSCATG00000030712) CTAG2 (ENSCATG00000028740) GAB3 (ENSCATG00000030384) DKC1 (ENSCATG00000033602) MPP1 (ENSCATG00000039189) SMIM9 (ENSCATG00000029574) ENSCATG00000030353 F8 (ENSCATG00000031608) FUNDC2 (ENSCATG00000024236) MTCP1 (ENSCATG00000035622) CMC4 (ENSCATG00000030790) BRCC3 (ENSCATG00000021334) VBP1 (ENSCATG00000028770) #22 ENSCATG00000016846 RAB39B (ENSCATG00000034919) CLIC2 (ENSCATG00000030595) Macaca ANCESTRAL SPECIES 13 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904.hb #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Pig-tailed macaque MODERN SPECIES 416 ENSMNEG00000016551 GAB3 (ENSMNEG00000036431) DKC1 (ENSMNEG00000034503) MPP1 (ENSMNEG00000040373) SMIM9 (ENSMNEG00000038954) F8 (ENSMNEG00000033339) FUNDC2 (ENSMNEG00000017025) CMC4 (ENSMNEG00000039701) MTCP1 (ENSMNEG00000041016) BRCC3 (ENSMNEG00000032943) VBP1 (ENSMNEG00000017547) #22 RAB39B (ENSMNEG00000030607) CLIC2 (ENSMNEG00000030252) Macaca_a ANCESTRAL SPECIES 11 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.b.b ENSGT00530000063808.a ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904.hb #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Rhesus MODERN SPECIES 327 DKC1 (ENSMMUG00000005768) MPP1 (ENSMMUG00000005772) ENSMMUG00000060911 SMIM9 (ENSMMUG00000062044) F8 (ENSMMUG00000010245) H2AB1 (ENSMMUG00000059127) ENSMMUG00000009476 FUNDC2 (ENSMMUG00000053499) ENSMMUG00000061897 CMC4 (ENSMMUG00000050298) MTCP1 (ENSMMUG00000010251) BRCC3 (ENSMMUG00000010253) ENSMMUG00000062127 ENSMMUG00000052111 ENSMMUG00000043981 ENSMMUG00000015095 #22 RAB39B (ENSMMUG00000059069) CLIC2 (ENSMMUG00000061009) H2AB2 (ENSMMUG00000055745) ENSMMUG00000058345 TMLHE (ENSMMUG00000009481) ENSMMUG00000061765 ENSMMUG00000064879 SPRY3 (ENSMMUG00000051319) VAMP7 (ENSMMUG00000002015) IL9R (ENSMMUG00000002016) ENSMMUG00000032340 ENSMMUG00000063448 Crab-eating macaque MODERN SPECIES 175 FAM50A (ENSMFAG00000021581) PLXNA3 (ENSMFAG00000040837) LAGE3 (ENSMFAG00000004038) UBL4A (ENSMFAG00000000884) SLC10A3 (ENSMFAG00000035989) FAM3A (ENSMFAG00000041814) G6PD (ENSMFAG00000043207) IKBKG (ENSMFAG00000032230) ENSMFAG00000060522 F8 (ENSMFAG00000039948) FUNDC2 (ENSMFAG00000038031) ENSMFAG00000045993 MTCP1 (ENSMFAG00000052287) BRCC3 (ENSMFAG00000031106) ENSMFAG00000056611 VBP1 (ENSMFAG00000032032) #22 ENSMFAG00000058523 ENSMFAG00000050091 ENSMFAG00000064770 RAB39B (ENSMFAG00000036188) ENSMFAG00000032659 SPRY3 (ENSMFAG00000014963) ENSMFAG00000053989 VAMP7 (ENSMFAG00000031038) IL9R (ENSMFAG00000000235) Vervet Monkey MODERN SPECIES 203 G6PD (ENSCSAG00000006732) IKBKG (ENSCSAG00000006727) ENSCSAG00000006721 GAB3 (ENSCSAG00000006717) DKC1 (ENSCSAG00000006706) MPP1 (ENSCSAG00000006698) SMIM9 (ENSCSAG00000006693) F8 (ENSCSAG00000006668) ENSCSAG00000000521 ENSCSAG00000000520 ENSCSAG00000000519 FUNDC2 (ENSCSAG00000006563) CMC4 (ENSCSAG00000006553) MTCP1 (ENSCSAG00000006547) BRCC3 (ENSCSAG00000006538) ENSCSAG00000006524 #22 RAB39B (ENSCSAG00000006507) CLIC2 (ENSCSAG00000006505) TMLHE (ENSCSAG00000006499) SPRY3 (ENSCSAG00000000518) VAMP7 (ENSCSAG00000006492) IL9R (ENSCSAG00000006485) Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00530000063529.B ENSGT00940000154103.b ENSGT00950000182925.D.a.b.a.b ENSGT00940000164739 ENSGT00940000154746.h ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.b.h ENSGT00950000182925.D.a.b.b ENSGT00950000182925.D.a.a.b.b ENSGT00390000012916.h.a.a ENSGT00390000004891 ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00390000018904.ib #22 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000153097.B.a.a ENSGT00940000153097.B.a.b.e ENSGT00390000001055 ENSGT00940000153097.B.a.b.f ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000162763 ENSGT00940000161795 ENSGT00940000162980 ENSGT00940000155877.i.a ENSGT00940000159438 ENSGT00390000012692.f Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000155148.b.u ENSGT00950000182925.D.a.b.a.b ENSGT00940000164739 ENSGT00940000154746.h ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.b.h ENSGT00950000182925.D.a.b.b ENSGT00940000154672.t ENSGT00950000182925.D.a.a.b.b ENSGT00390000012916.h.a.a ENSGT00390000004891 ENSGT00940000162603 ENSGT00940000161062 ENSGT00950000183031.B.e.a ENSGT00940000162993 ENSGT00390000018904.ib #22 ENSGT00940000163664 ENSGT00840000130063 ENSGT00940000153097.B.a.b.f.a.b ENSGT00940000153097.B.a.a ENSGT00940000153097.B.a.b.e ENSGT00390000001055 ENSGT00940000153097.B.a.b.f.a.a ENSGT00940000159912 ENSGT00530000063540.a ENSGT00950000182835.c.c ENSGT00940000162763 ENSGT00940000161795 ENSGT00940000162980 ENSGT00940000155877.i.a ENSGT00940000159438 Macaca ANCESTRAL SPECIES 13 ENSGT00390000012692.f ENSGT00940000159438 ENSGT00940000155877.i.a ENSGT00940000162980 ENSGT00940000161795 ENSGT00940000162763 ENSGT00950000182835.c.c ENSGT00530000063540.a ENSGT00940000159912 ENSGT00940000153097.B.a.b.f.a.a ENSGT00390000001055 ENSGT00940000153097.B.a.b.e ENSGT00940000153097.B.a.a ENSGT00940000153097.B.a.b.f.a.b ENSGT00840000130063 ENSGT00390000018904.ib #22 ENSGT00940000163664 ENSGT00940000162993 ENSGT00950000183031.B.e.a ENSGT00940000161062 ENSGT00940000162603 ENSGT00390000004891 ENSGT00390000012916.h.a.a ENSGT00950000182925.D.a.a.b.b ENSGT00940000154672.t ENSGT00950000182925.D.a.b.b ENSGT00950000182925.D.a.b.a.a.b.h ENSGT00940000162502 ENSGT00940000162988 ENSGT00950000182925.D.a.b.a.b ENSGT00940000155148.b.u Macaca_a ANCESTRAL SPECIES 11 ENSGT00390000012692.f ENSGT00940000159438 ENSGT00940000155877.i.a ENSGT00940000162980 ENSGT00940000161795 ENSGT00940000162763 ENSGT00950000182835.c.c ENSGT00530000063540.a ENSGT00940000159912 ENSGT00940000153097.B.a.b.f.a.a ENSGT00390000001055 ENSGT00940000153097.B.a.b.e ENSGT00940000153097.B.a.a ENSGT00940000153097.B.a.b.f.a.b ENSGT00840000130063 ENSGT00390000018904.ib #22 ENSGT00940000163664 ENSGT00940000162993 ENSGT00950000183031.B.e.a ENSGT00940000161062 ENSGT00940000162603 ENSGT00390000012916.h.a.a ENSGT00950000182925.D.a.b.b ENSGT00950000182925.D.a.b.a.a.b.h.a ENSGT00950000182925.D.a.b.a.a.b.h.b ENSGT00940000162502 ENSGT00940000162988 ENSGT00950000182925.D.a.b.a.b ENSGT00940000163337.a.a.a.a ENSGT00940000155148.b.u ENSGT00940000154103.b Rhesus MODERN SPECIES 327 ENSMMUG00000058922 ENSMMUG00000051670 ENSMMUG00000019432 FAAH2 (ENSMMUG00000016725) ENSMMUG00000058470 ENSMMUG00000016045 SPIN3 (ENSMMUG00000063849) UBQLN2 (ENSMMUG00000042087) KLF8 (ENSMMUG00000014678) ENSMMUG00000063731 ENSMMUG00000062132 ENSMMUG00000062445 ENSMMUG00000053644 RRAGB (ENSMMUG00000017635) FOXR2 (ENSMMUG00000061763) ENSMMUG00000042926 #22 USP51 (ENSMMUG00000052760) MAGEH1 (ENSMMUG00000046259) ENSMMUG00000060530 PAGE3 (ENSMMUG00000010324) FAM104B (ENSMMUG00000059922) ENSMMUG00000053924 ENSMMUG00000045847 APEX2 (ENSMMUG00000008428) PFKFB1 (ENSMMUG00000008425) TRO (ENSMMUG00000008422) ALAS2 (ENSMMUG00000008429) MAGED2 (ENSMMUG00000007345) ITIH6 (ENSMMUG00000007339) GNL3L (ENSMMUG00000008231) FGD1 (ENSMMUG00000012613) Vervet Monkey MODERN SPECIES 203 ASB12 (ENSCSAG00000012044) AMER1 (ENSCSAG00000000112) ARHGEF9 (ENSCSAG00000012051) SPIN4 (ENSCSAG00000000113) ENSCSAG00000000114 FAAH2 (ENSCSAG00000012061) ENSCSAG00000000115 ENSCSAG00000012068 ENSCSAG00000000116 SPIN3 (ENSCSAG00000000117) UBQLN2 (ENSCSAG00000000118) KLF8 (ENSCSAG00000012078) ENSCSAG00000000119 RRAGB (ENSCSAG00000012089) FOXR2 (ENSCSAG00000000120) ENSCSAG00000000121 #22 USP51 (ENSCSAG00000000122) MAGEH1 (ENSCSAG00000000123) ENSCSAG00000012094 PAGE3 (ENSCSAG00000012096) FAM104B (ENSCSAG00000012104) ALAS2 (ENSCSAG00000012117) APEX2 (ENSCSAG00000012124) PFKFB1 (ENSCSAG00000012140) TRO (ENSCSAG00000012194) MAGED2 (ENSCSAG00000012266) ITIH6 (ENSCSAG00000012306) ENSCSAG00000000124 GNL3L (ENSCSAG00000012324) FGD1 (ENSCSAG00000012335) ENSCSAG00000012366 Hominoidea ANCESTRAL SPECIES 29 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.a.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Hominidae ANCESTRAL SPECIES 8 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125.d.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00410000025802.h.a.a ENSGT00410000025802.h.b.a ENSGT00530000063801.a.n ENSGT00410000025802.h.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125.d.a.a Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00530000063435.a.i ENSGT00530000063808.a ENSGT00410000025802.h.a.a ENSGT00410000025802.h.b.a ENSGT00530000063801.a.n ENSGT00410000025802.h.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992.cb.b ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125.c Pan ANCESTRAL SPECIES 43 ENSGT00530000063808.a ENSGT00390000002566 ENSGT00410000025802.h.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000011549.e ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992.bb ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a.m ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125.d.a.a Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 881 ENSPTRG00000044736 #22 ENSPTRG00000048400 ENSPTRG00000043026 Chimpanzee MODERN SPECIES 972 ENSPTRG00000052333 ENSPTRG00000045486 ENSPTRG00000022446 GAB3 (ENSPTRG00000022447) DKC1 (ENSPTRG00000022449) MPP1 (ENSPTRG00000022450) ENSPTRG00000046688 SMIM9 (ENSPTRG00000028167) F8 (ENSPTRG00000022455) ENSPTRG00000052848 ENSPTRG00000052307 FUNDC2 (ENSPTRG00000044160) CMC4 (ENSPTRG00000039562) MTCP1 (ENSPTRG00000022457) BRCC3 (ENSPTRG00000044491) VBP1 (ENSPTRG00000022460) #22 RAB39B (ENSPTRG00000042083) CLIC2 (ENSPTRG00000022462) ENSPTRG00000044564 ENSPTRG00000046305 ENSPTRG00000045691 SPRY3 (ENSPTRG00000048381) VAMP7 (ENSPTRG00000046127) ENSPTRG00000007524 Bonobo MODERN SPECIES 369 G6PD (ENSPPAG00000030117) IKBKG (ENSPPAG00000019041) ENSPPAG00000024171 ENSPPAG00000030022 GAB3 (ENSPPAG00000033506) DKC1 (ENSPPAG00000023820) MPP1 (ENSPPAG00000040588) ENSPPAG00000031767 SMIM9 (ENSPPAG00000035097) F8 (ENSPPAG00000033513) ENSPPAG00000022594 FUNDC2 (ENSPPAG00000028980) CMC4 (ENSPPAG00000030202) MTCP1 (ENSPPAG00000029273) BRCC3 (ENSPPAG00000039895) VBP1 (ENSPPAG00000036017) #22 RAB39B (ENSPPAG00000041186) CLIC2 (ENSPPAG00000041308) ENSPPAG00000037387 SPRY3 (ENSPPAG00000001617) ENSPPAG00000032770 IL9R (ENSPPAG00000035209) Human MODERN SPECIES 1827 IKBKG (ENSG00000269335) CTAG1A (ENSG00000268651) CTAG1B (ENSG00000184033) CTAG2 (ENSG00000126890) GAB3 (ENSG00000160219) DKC1 (ENSG00000130826) MPP1 (ENSG00000130830) SMIM9 (ENSG00000203870) F8 (ENSG00000185010) H2AB1 (ENSG00000274183) F8A1 (ENSG00000288722) FUNDC2 (ENSG00000165775) CMC4 (ENSG00000182712) MTCP1 (ENSG00000214827) BRCC3 (ENSG00000185515) VBP1 (ENSG00000155959) #22 RAB39B (ENSG00000155961) CLIC2 (ENSG00000155962) H2AB2 (ENSG00000277858) F8A2 (ENSG00000288709) F8A3 (ENSG00000277150) H2AB3 (ENSG00000277745) TMLHE (ENSG00000185973) SPRY3 (ENSG00000168939) VAMP7 (ENSG00000124333) IL9R (ENSG00000124334) WASH6P (ENSG00000182484) Gorilla MODERN SPECIES 523 ENSGGOG00000040976 ENSGGOG00000022830 ENSGGOG00000043272 ENSGGOG00000025843 GAB3 (ENSGGOG00000001042) DKC1 (ENSGGOG00000001045) MPP1 (ENSGGOG00000001049) ENSGGOG00000025061 SMIM9 (ENSGGOG00000005354) F8 (ENSGGOG00000003600) ENSGGOG00000003617 FUNDC2 (ENSGGOG00000026954) CMC4 (ENSGGOG00000011528) MTCP1 (ENSGGOG00000037091) BRCC3 (ENSGGOG00000027248) VBP1 (ENSGGOG00000027061) #22 RAB39B (ENSGGOG00000005567) CLIC2 (ENSGGOG00000023292) ENSGGOG00000024008 SPRY3 (ENSGGOG00000022101) ENSGGOG00000001709 ENSGGOG00000007446 Orangutan MODERN SPECIES 242 IKBKG (ENSPPYG00000020886) ENSPPYG00000020887 ENSPPYG00000020888 CTAG2 (ENSPPYG00000020890) GAB3 (ENSPPYG00000020891) DKC1 (ENSPPYG00000020892) MPP1 (ENSPPYG00000020893) SMIM9 (ENSPPYG00000020894) F8 (ENSPPYG00000020895) ENSPPYG00000035928 ENSPPYG00000038630 FUNDC2 (ENSPPYG00000020897) CMC4 (ENSPPYG00000020898) MTCP1 (ENSPPYG00000035172) BRCC3 (ENSPPYG00000020899) VBP1 (ENSPPYG00000020900) #22 RAB39B (ENSPPYG00000032989) CLIC2 (ENSPPYG00000020902) ENSPPYG00000037853 ENSPPYG00000038438 ENSPPYG00000032431 ENSPPYG00000030924 ENSPPYG00000033468 TMLHE (ENSPPYG00000020904) SPRY3 (ENSPPYG00000020905) VAMP7 (ENSPPYG00000020906) ENSPPYG00000020907 Gibbon MODERN SPECIES 449 FAM3A (ENSNLEG00000030950) ENSNLEG00000014300 ENSNLEG00000014311 GAB3 (ENSNLEG00000014318) DKC1 (ENSNLEG00000014323) MPP1 (ENSNLEG00000014358) ENSNLEG00000014423 ENSNLEG00000028336 SMIM9 (ENSNLEG00000014424) F8 (ENSNLEG00000014427) ENSNLEG00000018302 ENSNLEG00000014443 CMC4 (ENSNLEG00000027271) MTCP1 (ENSNLEG00000014453) BRCC3 (ENSNLEG00000014460) VBP1 (ENSNLEG00000014475) #22 RAB39B (ENSNLEG00000014505) CLIC2 (ENSNLEG00000028091) SPRY3 (ENSNLEG00000018303) ENSNLEG00000014513 IL9R (ENSNLEG00000014552) Platyrrhini ANCESTRAL SPECIES 42 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.g ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00390000016992 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Cebidae ANCESTRAL SPECIES 27 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00390000016992 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Marmoset MODERN SPECIES 78 G6PD (ENSCJAG00000016775) IKBKG (ENSCJAG00000016764) GAB3 (ENSCJAG00000016753) ENSCJAG00000082602 DKC1 (ENSCJAG00000004210) MPP1 (ENSCJAG00000004227) SMIM9 (ENSCJAG00000004256) F8 (ENSCJAG00000004258) ENSCJAG00000076498 ENSCJAG00000079192 ENSCJAG00000004287 CMC4 (ENSCJAG00000078864) MTCP1 (ENSCJAG00000042284) BRCC3 (ENSCJAG00000004308) ENSCJAG00000085645 VBP1 (ENSCJAG00000004338) #22 RAB39B (ENSCJAG00000064579) CLIC2 (ENSCJAG00000004362) ENSCJAG00000073788 ENSCJAG00000071739 TMLHE (ENSCJAG00000021685) ENSCJAG00000082014 ENSCJAG00000073952 VAMP7 (ENSCJAG00000047535) IL9R (ENSCJAG00000008510) ENSCJAG00000071287 Cebidae_a ANCESTRAL SPECIES 78 ENSGT00730000111022 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00510000049125 Capuchin MODERN SPECIES 574 FUNDC2 (ENSCCAG00000019713) MTCP1 (ENSCCAG00000023625) BRCC3 (ENSCCAG00000033753) VBP1 (ENSCCAG00000022791) #22 RAB39B (ENSCCAG00000030469) CLIC2 (ENSCCAG00000019952) ENSCCAG00000031797 TMLHE (ENSCCAG00000028430) SPRY3 (ENSCCAG00000031944) VAMP7 (ENSCCAG00000023295) IL9R (ENSCCAG00000028031) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 58 SERPINB13 (ENSSBOG00000032850) ENSSBOG00000035703 SERPINB11 (ENSSBOG00000029576) SERPINB7 (ENSSBOG00000022610) SERPINB2 (ENSSBOG00000028920) SERPINB10 (ENSSBOG00000026076) HMSD (ENSSBOG00000022952) SERPINB8 (ENSSBOG00000026962) CDH7 (ENSSBOG00000023446) CDH19 (ENSSBOG00000033631) DSEL (ENSSBOG00000014071) TMX3 (ENSSBOG00000032998) ENSSBOG00000028203 DOK6 (ENSSBOG00000025872) CD226 (ENSSBOG00000032857) ENSSBOG00000024700 #22 RTTN (ENSSBOG00000006589) SOCS6 (ENSSBOG00000020065) ENSSBOG00000010853 ENSSBOG00000024747 CBLN2 (ENSSBOG00000019328) NETO1 (ENSSBOG00000035887) ENSSBOG00000033127 ENSSBOG00000026756 FBXO15 (ENSSBOG00000035966) TIMM21 (ENSSBOG00000034325) CYB5A (ENSSBOG00000006601) C18orf63 (ENSSBOG00000027206) DIPK1C (ENSSBOG00000024590) CNDP2 (ENSSBOG00000027831) CNDP1 (ENSSBOG00000020895) Bolivian squirrel monkey MODERN SPECIES 50 USP2 (ENSSBOG00000034295) THY1 (ENSSBOG00000021168) NECTIN1 (ENSSBOG00000027245) TRIM29 (ENSSBOG00000021760) OAF (ENSSBOG00000020591) POU2F3 (ENSSBOG00000033756) TLCD5 (ENSSBOG00000025172) ARHGEF12 (ENSSBOG00000020565) GRIK4 (ENSSBOG00000030277) TBCEL (ENSSBOG00000028041) TECTA (ENSSBOG00000019507) SC5D (ENSSBOG00000020424) ENSSBOG00000015796 SORL1 (ENSSBOG00000027914) BLID (ENSSBOG00000028902) ENSSBOG00000032996 #22 UBASH3B (ENSSBOG00000026096) CRTAM (ENSSBOG00000020006) ENSSBOG00000019647 JHY (ENSSBOG00000020543) BSX (ENSSBOG00000035292) ENSSBOG00000033034 ENSSBOG00000032961 ENSSBOG00000029761 ENSSBOG00000035266 CLMP (ENSSBOG00000033154) GRAMD1B (ENSSBOG00000029940) SCN3B (ENSSBOG00000035992) ZNF202 (ENSSBOG00000030152) TMEM225 (ENSSBOG00000005269) VWA5A (ENSSBOG00000018587) Bolivian squirrel monkey MODERN SPECIES 296 ENSSBOG00000007609 ENSSBOG00000000429 #22 ENSSBOG00000020820 ENSSBOG00000032244 Bolivian squirrel monkey MODERN SPECIES 236 UBL4A (ENSSBOG00000030369) SLC10A3 (ENSSBOG00000027728) FAM3A (ENSSBOG00000030279) G6PD (ENSSBOG00000003239) IKBKG (ENSSBOG00000033453) ENSSBOG00000031845 GAB3 (ENSSBOG00000027441) DKC1 (ENSSBOG00000033746) MPP1 (ENSSBOG00000026026) SMIM9 (ENSSBOG00000018626) F8 (ENSSBOG00000002240) ENSSBOG00000034180 CMC4 (ENSSBOG00000033964) MTCP1 (ENSSBOG00000021241) BRCC3 (ENSSBOG00000035771) ENSSBOG00000022626 #22 RAB39B (ENSSBOG00000025110) CLIC2 (ENSSBOG00000022219) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 712 SERPINB11 (ENSANAG00000032659) SERPINB7 (ENSANAG00000034047) SERPINB2 (ENSANAG00000021447) SERPINB10 (ENSANAG00000023527) ENSANAG00000030210 SERPINB8 (ENSANAG00000020762) CDH7 (ENSANAG00000023216) ENSANAG00000035255 CDH19 (ENSANAG00000021403) DSEL (ENSANAG00000012597) TMX3 (ENSANAG00000035190) ENSANAG00000025522 DOK6 (ENSANAG00000032444) CD226 (ENSANAG00000021699) ENSANAG00000028436 #22 RTTN (ENSANAG00000030012) SOCS6 (ENSANAG00000013654) CBLN2 (ENSANAG00000032460) NETO1 (ENSANAG00000024199) FBXO15 (ENSANAG00000023790) TIMM21 (ENSANAG00000026364) CYB5A (ENSANAG00000020201) C18orf63 (ENSANAG00000028286) DIPK1C (ENSANAG00000028265) CNDP2 (ENSANAG00000035349) CNDP1 (ENSANAG00000031126) ZNF407 (ENSANAG00000026344) PTGR3 (ENSANAG00000035661) TSHZ1 (ENSANAG00000016880) ENSANAG00000035939 Mas night monkey MODERN SPECIES 1311 PLXNA3 (ENSANAG00000027264) LAGE3 (ENSANAG00000032507) ENSANAG00000029762 SLC10A3 (ENSANAG00000031182) FAM3A (ENSANAG00000028348) G6PD (ENSANAG00000031927) IKBKG (ENSANAG00000032209) GAB3 (ENSANAG00000032427) DKC1 (ENSANAG00000022732) MPP1 (ENSANAG00000034369) F8 (ENSANAG00000025258) ENSANAG00000030681 ENSANAG00000029218 MTCP1 (ENSANAG00000028247) BRCC3 (ENSANAG00000024915) ENSANAG00000027213 #22 RAB39B (ENSANAG00000031228) CLIC2 (ENSANAG00000033680) ENSANAG00000030737 TMLHE (ENSANAG00000026227) SPRY3 (ENSANAG00000032737) ENSANAG00000031493 Tarsier DUPLICATION Tarsier DUPLICATION Tarsier MODERN SPECIES 6941 F8 (ENSTSYG00000014405) FUNDC2 (ENSTSYG00000036522) CMC4 (ENSTSYG00000035254) MTCP1 (ENSTSYG00000031651) BRCC3 (ENSTSYG00000006632) ENSTSYG00000029520 VBP1 (ENSTSYG00000002205) #22 RAB39B (ENSTSYG00000030186) CLIC2 (ENSTSYG00000029016) Tarsier MODERN SPECIES 4286 CCBE1 (ENSTSYG00000004742) LMAN1 (ENSTSYG00000011817) CPLX4 (ENSTSYG00000028715) ENSTSYG00000032175 #22 GRP (ENSTSYG00000007549) SEC11C (ENSTSYG00000032673) ZNF532 (ENSTSYG00000032472) Tarsier MODERN SPECIES 4004 LIMK2 (ENSTSYG00000006595) RNF185 (ENSTSYG00000003045) PLA2G3 (ENSTSYG00000001374) INPP5J (ENSTSYG00000028578) SELENOM (ENSTSYG00000036202) SMTN (ENSTSYG00000035224) MORC2 (ENSTSYG00000013123) OSBP2 (ENSTSYG00000005447) CUNH5orf52 (ENSTSYG00000026560) SLC35E4 (ENSTSYG00000036314) TCN2 (ENSTSYG00000013936) PES1 (ENSTSYG00000009798) GAL3ST1 (ENSTSYG00000031547) SEC14L6 (ENSTSYG00000032403) SEC14L4 (ENSTSYG00000004289) ENSTSYG00000028758 #22 SEC14L3 (ENSTSYG00000000647) MTFP1 (ENSTSYG00000001092) SEC14L2 (ENSTSYG00000001077) RNF215 (ENSTSYG00000036482) CCDC157 (ENSTSYG00000013986) SF3A1 (ENSTSYG00000004739) TBC1D10A (ENSTSYG00000028455) CASTOR1 (ENSTSYG00000030880) OSM (ENSTSYG00000035548) LIF (ENSTSYG00000031653) Strepsirrhini ANCESTRAL SPECIES 55 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000000360.r.a.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Bushbaby MODERN SPECIES 374 GAB3 (ENSOGAG00000010477) DKC1 (ENSOGAG00000003399) MPP1 (ENSOGAG00000003402) F8 (ENSOGAG00000005241) ENSOGAG00000034494 FUNDC2 (ENSOGAG00000033461) CMC4 (ENSOGAG00000027720) MTCP1 (ENSOGAG00000005252) ENSOGAG00000005255 ENSOGAG00000029432 VBP1 (ENSOGAG00000016566) #22 RAB39B (ENSOGAG00000025424) ENSOGAG00000034308 SPRY3 (ENSOGAG00000001824) VAMP7 (ENSOGAG00000030896) Lemuriformes ANCESTRAL SPECIES 93 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 Mouse lemur MODERN SPECIES 169 ENSMICG00000002818 MPP1 (ENSMICG00000002828) SMIM9 (ENSMICG00000043321) ENSMICG00000048060 ENSMICG00000009653 ENSMICG00000037635 F8 (ENSMICG00000029671) ENSMICG00000007052 ENSMICG00000046481 ENSMICG00000036428 ENSMICG00000047033 ENSMICG00000028940 CMC4 (ENSMICG00000046262) MTCP1 (ENSMICG00000037190) BRCC3 (ENSMICG00000036150) VBP1 (ENSMICG00000033175) #22 RAB39B (ENSMICG00000044410) TMLHE (ENSMICG00000010663) ENSMICG00000036554 ENSMICG00000030636 ENSMICG00000036449 ENSMICG00000027801 ENSMICG00000043875 ARHGEF9 (ENSMICG00000007135) ENSMICG00000028484 ENSMICG00000032959 VAMP7 (ENSMICG00000001581) LDOC1 (ENSMICG00000034780) ENSMICG00000017029 ENSMICG00000034247 SLITRK4 (ENSMICG00000036015) Lemuriformes_a ANCESTRAL SPECIES 206 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 Greater bamboo lemur MODERN SPECIES 1606 VBP1 (ENSPSMG00000020000) #22 RAB39B (ENSPSMG00000019949) CLIC2 (ENSPSMG00000019936) Coquerels sifaka MODERN SPECIES 863 GAB3 (ENSPCOG00000023755) ENSPCOG00000015802 DKC1 (ENSPCOG00000026874) MPP1 (ENSPCOG00000006163) SMIM9 (ENSPCOG00000024173) ENSPCOG00000025344 ENSPCOG00000001067 F8 (ENSPCOG00000022504) FUNDC2 (ENSPCOG00000015705) CMC4 (ENSPCOG00000024860) MTCP1 (ENSPCOG00000018892) ENSPCOG00000025743 BRCC3 (ENSPCOG00000010400) VBP1 (ENSPCOG00000019297) #22 RAB39B (ENSPCOG00000013225) CLIC2 (ENSPCOG00000012095) Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Tree shrew MODERN SPECIES 2742 VBP1 (ENSTBEG00000007833) #22 RAB39B (ENSTBEG00000008074) CLIC2 (ENSTBEG00000008127) Glires ANCESTRAL SPECIES 10 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Lagomorpha ANCESTRAL SPECIES 188 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.c.b ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Rabbit DUPLICATION Rabbit MODERN SPECIES 516 ENSOCUG00000024391 ENSOCUG00000032744 ENSOCUG00000022276 GAB3 (ENSOCUG00000001360) DKC1 (ENSOCUG00000012646) MPP1 (ENSOCUG00000012660) ENSOCUG00000036130 F8 (ENSOCUG00000000142) FUNDC2 (ENSOCUG00000024176) ENSOCUG00000027749 MTCP1 (ENSOCUG00000009720) BRCC3 (ENSOCUG00000009730) ENSOCUG00000023330 ENSOCUG00000017448 #22 RAB39B (ENSOCUG00000004254) ENSOCUG00000037631 CLIC2 (ENSOCUG00000007480) ENSOCUG00000024947 TMLHE (ENSOCUG00000008669) SPRY3 (ENSOCUG00000022218) ENSOCUG00000001270 Rabbit MODERN SPECIES 9 SLC16A9 (ENSOCUG00000013648) FAM13C (ENSOCUG00000001543) PHYHIPL (ENSOCUG00000001539) BICC1 (ENSOCUG00000013696) TFAM (ENSOCUG00000014405) ENSOCUG00000036397 CISD1 (ENSOCUG00000002949) IPMK (ENSOCUG00000006432) ENSOCUG00000033571 ENSOCUG00000008290 ENSOCUG00000033494 ZWINT (ENSOCUG00000006806) ENSOCUG00000038084 PCDH15 (ENSOCUG00000000268) ENSOCUG00000023765 ENSOCUG00000027170 #22 MBL2 (ENSOCUG00000012742) DKK1 (ENSOCUG00000011487) PRKG1 (ENSOCUG00000011473) ENSOCUG00000027463 A1CF (ENSOCUG00000011587) ENSOCUG00000017169 SGMS1 (ENSOCUG00000010965) ENSOCUG00000035355 PAPSS2 (ENSOCUG00000012078) ENSOCUG00000034817 ATAD1 (ENSOCUG00000012082) PTEN (ENSOCUG00000008774) RNLS (ENSOCUG00000010512) LIPJ (ENSOCUG00000029546) LIPF (ENSOCUG00000012478) Rodentia ANCESTRAL SPECIES 10 ENSGT01050000244815.B.a.a ENSGT00390000000062.x.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 357 ENSDORG00000024355 #22 ENSDORG00000024775 #22 Zbtb33 (ENSDORG00000023347) Tmem255a (ENSDORG00000009805) Atp1b4 (ENSDORG00000010554) ENSDORG00000023555 Lamp2 (ENSDORG00000006433) Cul4b (ENSDORG00000012005) Mcts1 (ENSDORG00000027394) C1galt1c1 (ENSDORG00000027468) Gria3 (ENSDORG00000003484) ENSDORG00000027486 ENSDORG00000027353 Xiap (ENSDORG00000010762) Stag2 (ENSDORG00000003109) Sh2d1a (ENSDORG00000012131) Tenm1 (ENSDORG00000012135) Kangaroo rat MODERN SPECIES 357 ENSDORG00000024355 #22 ENSDORG00000024775 #22 Zbtb33 (ENSDORG00000023347) Tmem255a (ENSDORG00000009805) Atp1b4 (ENSDORG00000010554) ENSDORG00000023555 Lamp2 (ENSDORG00000006433) Cul4b (ENSDORG00000012005) Mcts1 (ENSDORG00000027394) C1galt1c1 (ENSDORG00000027468) Gria3 (ENSDORG00000003484) ENSDORG00000027486 ENSDORG00000027353 Xiap (ENSDORG00000010762) Stag2 (ENSDORG00000003109) Sh2d1a (ENSDORG00000012131) Kangaroo rat MODERN SPECIES 320 Pikfyve (ENSDORG00000005745) Pth2r (ENSDORG00000005747) ENSDORG00000028731 ENSDORG00000029050 ENSDORG00000014386 Map2 (ENSDORG00000005837) Unc80 (ENSDORG00000005840) Rpe (ENSDORG00000005846) Kansl1l (ENSDORG00000005847) Acadl (ENSDORG00000005849) ENSDORG00000024057 Myl1 (ENSDORG00000027836) Lancl1 (ENSDORG00000009233) Cps1 (ENSDORG00000007835) Erbb4 (ENSDORG00000013025) ENSDORG00000023387 #22 ENSDORG00000028919 Ikzf2 (ENSDORG00000007539) ENSDORG00000025882 Vwc2l (ENSDORG00000010438) ENSDORG00000015439 Abca12 (ENSDORG00000005459) Atic (ENSDORG00000010127) ENSDORG00000028093 ENSDORG00000023313 Mreg (ENSDORG00000008365) Pecr (ENSDORG00000015456) Tmem169 (ENSDORG00000011415) Xrcc5 (ENSDORG00000011417) Marchf4 (ENSDORG00000002802) Smarcal1 (ENSDORG00000013944) Kangaroo rat MODERN SPECIES 526 Slc10a3 (ENSDORG00000005197) Fam3a (ENSDORG00000025173) ENSDORG00000012731 Ikbkg (ENSDORG00000028140) ENSDORG00000000625 Gab3 (ENSDORG00000006809) ENSDORG00000013566 Mpp1 (ENSDORG00000013568) ENSDORG00000024019 F8 (ENSDORG00000013155) ENSDORG00000028874 Fundc2 (ENSDORG00000013156) Mtcp1 (ENSDORG00000013159) ENSDORG00000029487 ENSDORG00000013161 ENSDORG00000004628 #22 Rab39b (ENSDORG00000029496) F8a (ENSDORG00000028723) ENSDORG00000014658 ENSDORG00000026230 Myomorpha ANCESTRAL SPECIES 6 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 196 ENSJJAG00000005317 Rph3a (ENSJJAG00000022547) ENSJJAG00000017647 ENSJJAG00000016775 ENSJJAG00000016688 Hectd4 (ENSJJAG00000014580) ENSJJAG00000013034 ENSJJAG00000012893 Erp29 (ENSJJAG00000012814) ENSJJAG00000012636 Tmem116 (ENSJJAG00000001140) ENSJJAG00000000141 Aldh2 (ENSJJAG00000024048) ENSJJAG00000023508 Brap (ENSJJAG00000023208) ENSJJAG00000022969 #22 ENSJJAG00000022812 Sh2b3 (ENSJJAG00000022530) ENSJJAG00000022371 Pheta1 (ENSJJAG00000022209) Cux2 (ENSJJAG00000021345) Myl2 (ENSJJAG00000019617) ENSJJAG00000019211 Ppp1cc (ENSJJAG00000018707) Hvcn1 (ENSJJAG00000018196) Tctn1 (ENSJJAG00000017889) Pptc7 (ENSJJAG00000013648) Rad9b (ENSJJAG00000011599) ENSJJAG00000010799 Fam216a (ENSJJAG00000007023) Gpn3 (ENSJJAG00000005601) Lesser Egyptian jerboa MODERN SPECIES 177 Mrpl30 (ENSJJAG00000006196) Lyg2 (ENSJJAG00000005225) Lyg1 (ENSJJAG00000001060) Txndc9 (ENSJJAG00000021906) ENSJJAG00000016442 Rev1 (ENSJJAG00000015493) Aff3 (ENSJJAG00000013155) Zc3h8 (ENSJJAG00000002355) ENSJJAG00000022170 Zc3h6 (ENSJJAG00000013206) Ttl (ENSJJAG00000011686) Polr1b (ENSJJAG00000000143) Chchd5 (ENSJJAG00000020591) ENSJJAG00000020382 ENSJJAG00000014037 ENSJJAG00000011515 #22 Ckap2l (ENSJJAG00000010727) Il1a (ENSJJAG00000010242) Il1b (ENSJJAG00000007645) Il36g (ENSJJAG00000001783) ENSJJAG00000001509 Il36rn (ENSJJAG00000017029) Il1f10 (ENSJJAG00000015403) Il1rn (ENSJJAG00000013921) Psd4 (ENSJJAG00000006466) Pax8 (ENSJJAG00000001232) Lesser Egyptian jerboa MODERN SPECIES 248 Gab3 (ENSJJAG00000010656) ENSJJAG00000010086 Mpp1 (ENSJJAG00000009953) F8 (ENSJJAG00000003754) Fundc2 (ENSJJAG00000000632) Cmc4 (ENSJJAG00000018410) Mtcp1 (ENSJJAG00000018300) ENSJJAG00000017846 ENSJJAG00000017143 #22 Rab39b (ENSJJAG00000016977) ENSJJAG00000016928 ENSJJAG00000016876 ENSJJAG00000016767 ENSJJAG00000016374 ENSJJAG00000016041 Lesser Egyptian jerboa MODERN SPECIES 81 ENSJJAG00000010770 Epha1 (ENSJJAG00000021813) Zyx (ENSJJAG00000016066) Casp2 (ENSJJAG00000008256) Tmem139 (ENSJJAG00000014062) ENSJJAG00000012066 Tas2r144 (ENSJJAG00000017432) Trpv5 (ENSJJAG00000020226) Trpv6 (ENSJJAG00000010273) Ephb6 (ENSJJAG00000015598) ENSJJAG00000007203 ENSJJAG00000013742 Prss59 (ENSJJAG00000020845) Moxd2 (ENSJJAG00000011768) ENSJJAG00000017582 ENSJJAG00000013568 #22 Clec5a (ENSJJAG00000017338) Ssbp1 (ENSJJAG00000016282) ENSJJAG00000001577 Wee2 (ENSJJAG00000022003) ENSJJAG00000014217 ENSJJAG00000016723 Braf (ENSJJAG00000020559) ENSJJAG00000000905 Dennd2a (ENSJJAG00000017109) ENSJJAG00000010761 Rab19 (ENSJJAG00000015955) Slc37a3 (ENSJJAG00000019794) Parp12 (ENSJJAG00000019161) Tbxas1 (ENSJJAG00000020954) Hipk2 (ENSJJAG00000019253) Muroidea ANCESTRAL SPECIES 13 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00390000016992 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Upper Galilee mountains blind mole rat MODERN SPECIES 1181 ENSNGAG00000009939 Gab3 (ENSNGAG00000003725) ENSNGAG00000015724 Mpp1 (ENSNGAG00000017947) F8 (ENSNGAG00000013455) Fundc2 (ENSNGAG00000017968) Cmc4 (ENSNGAG00000019649) Mtcp1 (ENSNGAG00000020777) ENSNGAG00000000120 Vbp1 (ENSNGAG00000013672) #22 Rab39b (ENSNGAG00000000596) ENSNGAG00000001653 F8a (ENSNGAG00000011651) ENSNGAG00000012650 ENSNGAG00000015269 ENSNGAG00000016000 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Cricetidae ANCESTRAL SPECIES 8 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Cricetidae_B ANCESTRAL SPECIES 28 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01100000263574.b.j ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Prairie vole MODERN SPECIES 168 Fam3a (ENSMOCG00000016025) ENSMOCG00000015421 Ikbkg (ENSMOCG00000011244) ENSMOCG00000017711 Or7r1 (ENSMOCG00000002349) Gab3 (ENSMOCG00000015626) ENSMOCG00000001169 Mpp1 (ENSMOCG00000000082) Smim9 (ENSMOCG00000003619) ENSMOCG00000001114 F8 (ENSMOCG00000006178) Fundc2 (ENSMOCG00000013641) Mtcp1 (ENSMOCG00000002450) Cmc4 (ENSMOCG00000019858) ENSMOCG00000000841 Vbp1 (ENSMOCG00000013440) #22 Rab39b (ENSMOCG00000006994) ENSMOCG00000012583 ENSMOCG00000003592 ENSMOCG00000015068 ENSMOCG00000012849 ENSMOCG00000019973 Northern American deer mouse MODERN SPECIES 475 ENSPEMG00000029875 ENSPEMG00000027888 ENSPEMG00000026245 Or7r1 (ENSPEMG00000009130) Or13ae2 (ENSPEMG00000025767) Gab3 (ENSPEMG00000012634) Dkc1 (ENSPEMG00000013348) ENSPEMG00000022395 Mpp1 (ENSPEMG00000014261) Smim9 (ENSPEMG00000010945) F8 (ENSPEMG00000014119) ENSPEMG00000026725 Cmc4 (ENSPEMG00000024388) Mtcp1 (ENSPEMG00000030977) Brcc3 (ENSPEMG00000014353) Vbp1 (ENSPEMG00000004677) #22 Rab39b (ENSPEMG00000029552) ENSPEMG00000029793 ENSPEMG00000014227 ENSPEMG00000000399 ENSPEMG00000008468 ENSPEMG00000017331 Ct55 (ENSPEMG00000000280) ENSPEMG00000024706 ENSPEMG00000029185 ENSPEMG00000027347 Cricetinae ANCESTRAL SPECIES 46 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b.q.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 16 Fam3a (ENSCGRG00001017590) G6PDH (ENSCGRG00001009805) Ikbkg (ENSCGRG00001023852) Or7r1 (ENSCGRG00001002331) ENSCGRG00001018213 ENSCGRG00001000852 Gab3 (ENSCGRG00001024780) ENSCGRG00001014574 Mpp1 (ENSCGRG00001000334) Smim9 (ENSCGRG00001020847) F8 (ENSCGRG00001018172) Fundc2 (ENSCGRG00001005074) Cmc4 (ENSCGRG00001024106) Mtcp1 (ENSCGRG00001021448) Brcc3 (ENSCGRG00001000059) ENSCGRG00001012855 #22 Rab39b (ENSCGRG00001022502) ENSCGRG00001011867 ENSCGRG00001004214 ENSCGRG00001005752 Chinese hamster chok1gshd MODERN SPECIES 299 ENSCGRG00001017101 ENSCGRG00001015403 Rnls (ENSCGRG00001012669) ENSCGRG00001011824 Atad1 (ENSCGRG00001009686) Papss2 (ENSCGRG00001019072) Minpp1 (ENSCGRG00001016154) Fgfbp3 (ENSCGRG00001015712) Tnks2 (ENSCGRG00001008529) ENSCGRG00001013440 #22 Ppp1r3c (ENSCGRG00001019196) Hectd2 (ENSCGRG00001015774) Pcgf5 (ENSCGRG00001010288) Ankrd1 (ENSCGRG00001019357) ENSCGRG00001017068 Htr7 (ENSCGRG00001006968) Kif20b (ENSCGRG00001019586) Pank1 (ENSCGRG00001016193) Slc16a12 (ENSCGRG00001013278) ENSCGRG00001012991 Ifit1 (ENSCGRG00001009709) Ifit2 (ENSCGRG00001008403) ENSCGRG00001012858 ENSCGRG00001018062 Lipa (ENSCGRG00001017679) Chinese hamster chok1gshd MODERN SPECIES 111 Exo5 (ENSCGRG00001006191) Rims3 (ENSCGRG00001020274) Nfyc (ENSCGRG00001012554) Kcnq4 (ENSCGRG00001015701) Cited4 (ENSCGRG00001010621) Ctps (ENSCGRG00001025038) Slfnl1 (ENSCGRG00001004308) Scmh1 (ENSCGRG00001019038) Foxo6 (ENSCGRG00001020370) Edn2 (ENSCGRG00001024277) Hivep3 (ENSCGRG00001024833) ENSCGRG00001018314 Guca2b (ENSCGRG00001019230) Guca2a (ENSCGRG00001020375) Foxj3 (ENSCGRG00001024073) ENSCGRG00001005285 #22 Rimkla (ENSCGRG00001011564) Zmynd12 (ENSCGRG00001013189) Ppcs (ENSCGRG00001013754) Ccdc30 (ENSCGRG00001015266) ENSCGRG00001018996 ENSCGRG00001024101 ENSCGRG00001002534 Cldn19 (ENSCGRG00001003612) P3h1 (ENSCGRG00001014713) AU022252 (ENSCGRG00001023179) Tmem269 (ENSCGRG00001023367) Svbp (ENSCGRG00001019425) Ermap (ENSCGRG00001021027) ENSCGRG00001006325 Slc2a1 (ENSCGRG00001024604) Golden Hamster MODERN SPECIES 891 ENSMAUG00000006516 Gab3 (ENSMAUG00000000113) Dkc1 (ENSMAUG00000016454) ENSMAUG00000000280 Smim9 (ENSMAUG00000018168) F8 (ENSMAUG00000017844) Fundc2 (ENSMAUG00000013769) Mtcp1 (ENSMAUG00000013746) Cmc4 (ENSMAUG00000012104) Brcc3 (ENSMAUG00000017183) Vbp1 (ENSMAUG00000012627) #22 Rab39b (ENSMAUG00000011701) ENSMAUG00000011862 ENSMAUG00000010073 ENSMAUG00000000133 Murinae ANCESTRAL SPECIES 14 ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000016992 ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 Mus ANCESTRAL SPECIES 9 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.a ENSGT00940000153421.a.a.a.a.b ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.f.b ENSGT00940000163515.j ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000158553.b.a ENSGT00720000109445 Mus_A ANCESTRAL SPECIES 15 ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000000062.x.b.k.b ENSGT00390000000062.x.b.l.b ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.a ENSGT00940000153421.a.a.a.a.b ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.f.b ENSGT00940000163515.j ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000158553.b.a ENSGT00720000109445 Mus_B ANCESTRAL SPECIES 14 ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00390000001700.a.b.b.o.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.a.e.a ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.a ENSGT00940000153421.a.a.a.a.b ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.f.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.e ENSGT00940000163515.j ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b Mus_C ANCESTRAL SPECIES 27 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a.o ENSGT00530000063808.a ENSGT00410000025802.g.b.q.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.a.e.a ENSGT00390000005717.e.b.b.b ENSGT00390000005717.e.b.a spretus MODERN SPECIES 19 Ikbkg (MGP_SPRETEiJ_G0034342) G6pdx (MGP_SPRETEiJ_G0034343) MGP_SPRETEiJ_G0034344 Or7r1 (MGP_SPRETEiJ_G0034345) Or13ae2 (MGP_SPRETEiJ_G0034346) MGP_SPRETEiJ_G0034347 MGP_SPRETEiJ_G0034348 Dkc1 (MGP_SPRETEiJ_G0034351) Mpp1 (MGP_SPRETEiJ_G0034352) Smim9 (MGP_SPRETEiJ_G0034353) F8 (MGP_SPRETEiJ_G0034354) Fundc2 (MGP_SPRETEiJ_G0034355) Cmc4 (MGP_SPRETEiJ_G0034356) Mtcp1 (MGP_SPRETEiJ_G0034357) Brcc3 (MGP_SPRETEiJ_G0034358) Vbp1 (MGP_SPRETEiJ_G0034359) #22 Rab39b (MGP_SPRETEiJ_G0034360) Pls3 (MGP_SPRETEiJ_G0034361) MGP_SPRETEiJ_G0034362 MGP_SPRETEiJ_G0034363 MGP_SPRETEiJ_G0034364 Cldn34b4 (MGP_SPRETEiJ_G0034365) Cldn34d (MGP_SPRETEiJ_G0034366) Tbl1x (MGP_SPRETEiJ_G0034367) Prkx (MGP_SPRETEiJ_G0034368) MGP_SPRETEiJ_G0034369 MGP_SPRETEiJ_G0034370 MGP_SPRETEiJ_G0034371 4930480E11Rik (MGP_SPRETEiJ_G0034372) Prrg1 (MGP_SPRETEiJ_G0034373) Fam47c (MGP_SPRETEiJ_G0034374) Steppe mouse MODERN SPECIES 1452 Vbp1 (ENSMSIG00000016065) #22 Rab39b (ENSMSIG00000016050) Mouse MODERN SPECIES 37 Ctag2l1 (ENSMUSG00000079536) Or7r1 (ENSMUSG00000043715) Or13ae2 (ENSMUSG00000051706) Pwwp4c (ENSMUSG00000079534) Ctag2l2 (ENSMUSG00000079532) Pwwp4d (ENSMUSG00000079531) Gab3 (ENSMUSG00000032750) Dkc1 (ENSMUSG00000031403) Mpp1 (ENSMUSG00000031402) Smim9 (ENSMUSG00000073094) F8 (ENSMUSG00000031196) Fundc2 (ENSMUSG00000031198) Cmc4 (ENSMUSG00000090110) Mtcp1 (ENSMUSG00000031200) Brcc3 (ENSMUSG00000031201) Vbp1 (ENSMUSG00000031197) #22 Rab39b (ENSMUSG00000031202) Pls3 (ENSMUSG00000016382) Cldn34b3 (ENSMUSG00000071738) Cldn34b4 (ENSMUSG00000073085) Cldn34d (ENSMUSG00000079525) Tbl1x (ENSMUSG00000025246) Prkx (ENSMUSG00000035725) Pbsn (ENSMUSG00000000003) Gm14744 (ENSMUSG00000079522) 5430402E10Rik (ENSMUSG00000044121) Obp1a (ENSMUSG00000067684) Gm5938 (ENSMUSG00000079521) Obp1b (ENSMUSG00000067679) Gm14743 (ENSMUSG00000079519) 4930480E11Rik (ENSMUSG00000035651) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Hystricomorpha ANCESTRAL SPECIES 54 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000000360.r.a.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000000242 ENSHGLG00000037767 NWD2 (ENSHGLG00000000298) ENSHGLG00000040844 ENSHGLG00000040492 ENSHGLG00000043452 PGM2 (ENSHGLG00000001842) ENSHGLG00000002323 ENSHGLG00000003063 ENSHGLG00000000606 ENSHGLG00000019811 ENSHGLG00000033549 ENSHGLG00000034348 ENSHGLG00000043517 ENSHGLG00000044532 ENSHGLG00000019798 #22 KLF3 (ENSHGLG00000049437) ENSHGLG00000000855 ENSHGLG00000019856 ENSHGLG00000001742 TLR6 (ENSHGLG00000050436) FAM114A1 (ENSHGLG00000002258) TMEM156 (ENSHGLG00000002626) ENSHGLG00000033489 KLHL5 (ENSHGLG00000001944) WDR19 (ENSHGLG00000002756) ENSHGLG00000002546 ENSHGLG00000032109 KLB (ENSHGLG00000002389) ENSHGLG00000002318 LIAS (ENSHGLG00000002264) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000049566 ENSHGLG00000046464 ENSHGLG00000049532 ENSHGLG00000000701 DKC1 (ENSHGLG00000000649) MPP1 (ENSHGLG00000000629) ENSHGLG00000000581 F8 (ENSHGLG00000034300) ENSHGLG00000048533 ENSHGLG00000037924 ENSHGLG00000035621 FUNDC2 (ENSHGLG00000001278) MTCP1 (ENSHGLG00000001243) ENSHGLG00000001061 ENSHGLG00000047377 VBP1 (ENSHGLG00000044108) #22 RAB39B (ENSHGLG00000036840) ENSHGLG00000043926 TMLHE (ENSHGLG00000000101) ENSHGLG00000040623 ENSHGLG00000033454 ENSHGLG00000040335 ENSHGLG00000046871 ENSHGLG00000045337 CNGA2 (ENSHGLG00000002074) PRRG3 (ENSHGLG00000042836) ENSHGLG00000043691 ENSHGLG00000040679 ENSHGLG00000019897 VMA21 (ENSHGLG00000037060) ENSHGLG00000047782 Naked mole-rat female MODERN SPECIES SGK1 (ENSHGLG00000000909) ENSHGLG00000019010 SLC2A12 (ENSHGLG00000000953) ENSHGLG00000046831 TCF21 (ENSHGLG00000035092) ENSHGLG00000040407 ENSHGLG00000032159 ENSHGLG00000003172 ENSHGLG00000035822 CEP85L (ENSHGLG00000003335) PLN (ENSHGLG00000050941) MCM9 (ENSHGLG00000002805) ENSHGLG00000039943 FAM184A (ENSHGLG00000002320) MAN1A1 (ENSHGLG00000002233) ENSHGLG00000002141 #22 ENSHGLG00000001744 TBC1D32 (ENSHGLG00000001631) GJA1 (ENSHGLG00000047888) ENSHGLG00000032930 HSF2 (ENSHGLG00000000864) SERINC1 (ENSHGLG00000035221) ENSHGLG00000036667 FABP7 (ENSHGLG00000001824) SMPDL3A (ENSHGLG00000001781) CLVS2 (ENSHGLG00000001622) TRDN (ENSHGLG00000001423) ENSHGLG00000032242 ENSHGLG00000001275 ENSHGLG00000044736 ENSHGLG00000033903 Hystricomorpha_a ANCESTRAL SPECIES 61 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000000360.r.a.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Hystricomorpha_b ANCESTRAL SPECIES 120 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00390000000360.r.a.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Degu DUPLICATION Degu MODERN SPECIES 409 GAB3 (ENSODEG00000000525) ENSODEG00000000549 MPP1 (ENSODEG00000000590) F8 (ENSODEG00000000713) ENSODEG00000000342 CMC4 (ENSODEG00000000352) MTCP1 (ENSODEG00000000367) BRCC3 (ENSODEG00000000422) ENSODEG00000000490 ENSODEG00000000509 #22 RAB39B (ENSODEG00000000520) CLIC2 (ENSODEG00000000532) Degu MODERN SPECIES 320 ENSODEG00000002048 HNRNPUL2 (ENSODEG00000002142) TTC9C (ENSODEG00000002308) GNG3 (ENSODEG00000002315) UBXN1 (ENSODEG00000002987) UQCC3 (ENSODEG00000003020) INTS5 (ENSODEG00000003038) GANAB (ENSODEG00000003210) B3GAT3 (ENSODEG00000003388) ROM1 (ENSODEG00000003428) EML3 (ENSODEG00000003455) MTA2 (ENSODEG00000003595) TUT1 (ENSODEG00000002204) ENSODEG00000002254 ENSODEG00000002275 ENSODEG00000002297 #22 ENSODEG00000002313 ENSODEG00000002333 VWCE (ENSODEG00000002356) DDB1 (ENSODEG00000002419) CYB561A3 (ENSODEG00000002516) TKFC (ENSODEG00000002529) TMEM138 (ENSODEG00000002548) TMEM216 (ENSODEG00000002567) CPSF7 (ENSODEG00000002610) SDHAF2 (ENSODEG00000002638) PPP1R32 (ENSODEG00000004127) SYT7 (ENSODEG00000004157) DAGLA (ENSODEG00000004222) MYRF (ENSODEG00000004367) TMEM258 (ENSODEG00000004598) Long-tailed chinchilla MODERN SPECIES 301 GAB3 (ENSCLAG00000000759) DKC1 (ENSCLAG00000000720) MPP1 (ENSCLAG00000000595) F8 (ENSCLAG00000000314) FUNDC2 (ENSCLAG00000000230) CMC4 (ENSCLAG00000000217) MTCP1 (ENSCLAG00000000239) BRCC3 (ENSCLAG00000000163) ENSCLAG00000000125 VBP1 (ENSCLAG00000000117) #22 RAB39B (ENSCLAG00000000113) CLIC2 (ENSCLAG00000000498) TMLHE (ENSCLAG00000000490) SPRY3 (ENSCLAG00000000405) VAMP7 (ENSCLAG00000000352) Guinea pig MODERN SPECIES 148 ENSCPOG00000034445 UBL4A (ENSCPOG00000040690) SLC10A3 (ENSCPOG00000007289) FAM3A (ENSCPOG00000019367) G6PD (ENSCPOG00000021395) IKBKG (ENSCPOG00000021550) ENSCPOG00000026136 GAB3 (ENSCPOG00000002987) DKC1 (ENSCPOG00000008825) MPP1 (ENSCPOG00000008826) F8 (ENSCPOG00000007773) FUNDC2 (ENSCPOG00000015635) MTCP1 (ENSCPOG00000034922) CMC4 (ENSCPOG00000033896) ENSCPOG00000001882 VBP1 (ENSCPOG00000013652) #22 RAB39B (ENSCPOG00000039524) CLIC2 (ENSCPOG00000007641) TMLHE (ENSCPOG00000005415) SPRY3 (ENSCPOG00000038854) VAMP7 (ENSCPOG00000024405) Sciuridae ANCESTRAL SPECIES 62 ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Marmotini ANCESTRAL SPECIES 112 ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294.x ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294.w.a ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 Alpin marmot MODERN SPECIES 163 ENSMMMG00000000626 GAB3 (ENSMMMG00000000520) ENSMMMG00000000467 MPP1 (ENSMMMG00000000399) F8 (ENSMMMG00000000247) FUNDC2 (ENSMMMG00000000206) CMC4 (ENSMMMG00000000178) MTCP1 (ENSMMMG00000000151) BRCC3 (ENSMMMG00000000076) ENSMMMG00000024312 VBP1 (ENSMMMG00000024309) #22 RAB39B (ENSMMMG00000024308) CLIC2 (ENSMMMG00000024307) Marmotini_b ANCESTRAL SPECIES 202 ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294.w.b ENSGT00940000160294.x ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294.w.a ENSGT00940000154783.f.m ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 Arctic ground squirrel MODERN SPECIES 646 VAMP7 (ENSUPAG00010007306) SPRY3 (ENSUPAG00010007313) TMLHE (ENSUPAG00010007316) ENSUPAG00010007335 ENSUPAG00010007355 ENSUPAG00010008121 CMC4 (ENSUPAG00010008129) MTCP1 (ENSUPAG00010008144) BRCC3 (ENSUPAG00010008154) ENSUPAG00010008195 VBP1 (ENSUPAG00010008210) #22 RAB39B (ENSUPAG00010008223) CLIC2 (ENSUPAG00010008229) Squirrel MODERN SPECIES 519 ENSSTOG00000031419 GAB3 (ENSSTOG00000001065) ENSSTOG00000001074 MPP1 (ENSSTOG00000001078) F8 (ENSSTOG00000023387) ENSSTOG00000032258 ENSSTOG00000020699 ENSSTOG00000007801 CMC4 (ENSSTOG00000025729) MTCP1 (ENSSTOG00000034563) BRCC3 (ENSSTOG00000019781) VBP1 (ENSSTOG00000006684) #22 RAB39B (ENSSTOG00000011237) CLIC2 (ENSSTOG00000025815) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005017218 ENSSVLG00005017166 ENSSVLG00005017122 ENSSVLG00005017050 ENSSVLG00005016985 GAB3 (ENSSVLG00005016708) DKC1 (ENSSVLG00005016642) MPP1 (ENSSVLG00005016498) SMIM9 (ENSSVLG00005016452) ENSSVLG00005016435 ENSSVLG00005016424 F8 (ENSSVLG00005016200) ENSSVLG00005016124 MTCP1 (ENSSVLG00005016077) ENSSVLG00005015678 ENSSVLG00005015476 #22 RAB39B (ENSSVLG00005015437) CLIC2 (ENSSVLG00005015403) ENSSVLG00005015390 ENSSVLG00005015367 ENSSVLG00005015345 TMLHE (ENSSVLG00005015282) ENSSVLG00005015225 SPRY3 (ENSSVLG00005015208) VAMP7 (ENSSVLG00005015109) Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005010236 PDE10A (ENSSVLG00005010372) C6orf118 (ENSSVLG00005010851) QKI (ENSSVLG00005011023) PACRG (ENSSVLG00005011174) PRKN (ENSSVLG00005011292) AGPAT4 (ENSSVLG00005011803) MAP3K4 (ENSSVLG00005011972) ENSSVLG00005013042 ENSSVLG00005013165 ENSSVLG00005013240 SLC22A3 (ENSSVLG00005013302) SLC22A2 (ENSSVLG00005013453) SLC22A1 (ENSSVLG00005013724) IGF2R (ENSSVLG00005013999) ENSSVLG00005014490 #22 MAS1 (ENSSVLG00005014545) ENSSVLG00005014568 MRPL18 (ENSSVLG00005014946) ENSSVLG00005015024 ENSSVLG00005015119 ACAT2 (ENSSVLG00005015487) ENSSVLG00005015534 ENSSVLG00005015666 ENSSVLG00005015820 FNDC1 (ENSSVLG00005015913) TAGAP (ENSSVLG00005016286) RSPH3 (ENSSVLG00005016457) EZR (ENSSVLG00005016672) SYTL3 (ENSSVLG00005016826) ENSSVLG00005017151 Laurasiatheria ANCESTRAL SPECIES 26 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT01050000244815.B.a.a ENSGT00410000025802.h ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 Carnivora ANCESTRAL SPECIES 11 ENSGT00410000025802.h ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Felidae ANCESTRAL SPECIES 29 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.m ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT01010000226875 ENSGT00950000183055.a.b ENSGT00510000047733 Panthera ANCESTRAL SPECIES 53 ENSGT00940000157029 ENSGT00730000111366 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.m ENSGT00390000005685 ENSGT00940000160294.k ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294.l.a ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT01010000226875 ENSGT00950000183055.a.b ENSGT00510000047733 Tiger MODERN SPECIES 288 ENSPTIG00000009117 FUNDC2 (ENSPTIG00000008095) CMC4 (ENSPTIG00000008061) MTCP1 (ENSPTIG00000007940) BRCC3 (ENSPTIG00000007619) VBP1 (ENSPTIG00000006992) #22 RAB39B (ENSPTIG00000006927) CLIC2 (ENSPTIG00000006873) TMLHE (ENSPTIG00000006659) Panthera_a ANCESTRAL SPECIES 64 ENSGT00940000157029 ENSGT00730000111366 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.m ENSGT00390000005685 ENSGT00940000160294.k ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294.l.a ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 leopard MODERN SPECIES 270 F8 (ENSPPRG00000019076) ENSPPRG00000012508 FUNDC2 (ENSPPRG00000018602) ENSPPRG00000012502 CMC4 (ENSPPRG00000018580) MTCP1 (ENSPPRG00000018558) BRCC3 (ENSPPRG00000018359) VBP1 (ENSPPRG00000017482) #22 RAB39B (ENSPPRG00000017193) CLIC2 (ENSPPRG00000016958) lion MODERN SPECIES 88 MTM1 (ENSPLOG00000010530) MAMLD1 (ENSPLOG00000010470) GAB3 (ENSPLOG00000010419) DKC1 (ENSPLOG00000010363) ENSPLOG00000010239 SMIM9 (ENSPLOG00000010183) ENSPLOG00000010169 ENSPLOG00000010158 F8 (ENSPLOG00000010029) ENSPLOG00000009920 FUNDC2 (ENSPLOG00000009895) CMC4 (ENSPLOG00000009878) MTCP1 (ENSPLOG00000009860) BRCC3 (ENSPLOG00000009840) ENSPLOG00000009805 VBP1 (ENSPLOG00000009773) #22 RAB39B (ENSPLOG00000009756) ENSPLOG00000009737 ENSPLOG00000009727 ENSPLOG00000009715 ENSPLOG00000009699 TMLHE (ENSPLOG00000009686) ENSPLOG00000009660 SPRY3 (ENSPLOG00000009644) VAMP7 (ENSPLOG00000009591) GTPBP6 (ENSPLOG00000009500) Cat MODERN SPECIES 252 FAM3A (ENSFCAG00000035237) G6PD (ENSFCAG00000043880) IKBKG (ENSFCAG00000029840) ENSFCAG00000048808 GAB3 (ENSFCAG00000006576) DKC1 (ENSFCAG00000006577) MPP1 (ENSFCAG00000006578) SMIM9 (ENSFCAG00000040693) F8 (ENSFCAG00000048336) ENSFCAG00000045185 FUNDC2 (ENSFCAG00000031335) CMC4 (ENSFCAG00000023645) MTCP1 (ENSFCAG00000029629) BRCC3 (ENSFCAG00000019258) ENSFCAG00000027511 VBP1 (ENSFCAG00000022037) #22 RAB39B (ENSFCAG00000038920) CLIC2 (ENSFCAG00000038526) H2AB2 (ENSFCAG00000044576) ENSFCAG00000045412 H2AB3 (ENSFCAG00000044965) TMLHE (ENSFCAG00000023758) ENSFCAG00000047531 SPRY3 (ENSFCAG00000028342) VAMP7 (ENSFCAG00000025706) ENSFCAG00000048570 ENSFCAG00000010308 Caniformia ANCESTRAL SPECIES 22 ENSGT00410000025802.h ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Caniformia_b ANCESTRAL SPECIES 27 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01030000235238.c ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a ENSGT00390000000360.r.c.b ENSGT00390000012647 ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Ursidae ANCESTRAL SPECIES 45 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.p ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000013102.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b Ursus ANCESTRAL SPECIES 215 ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744.p ENSGT00940000163020 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000013102.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.c.b ENSGT00390000018904 #22 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b Polar bear MODERN SPECIES 139 ENSUMAG00000016855 GAB3 (ENSUMAG00000016863) DKC1 (ENSUMAG00000016899) MPP1 (ENSUMAG00000017156) F8 (ENSUMAG00000017227) ENSUMAG00000017273 FUNDC2 (ENSUMAG00000017279) ENSUMAG00000017285 CMC4 (ENSUMAG00000017289) MTCP1 (ENSUMAG00000017296) BRCC3 (ENSUMAG00000017317) VBP1 (ENSUMAG00000017374) #22 ENSUMAG00000017379 RAB39B (ENSUMAG00000017386) CLIC2 (ENSUMAG00000017393) TMLHE (ENSUMAG00000017400) SPRY3 (ENSUMAG00000017413) American black bear MODERN SPECIES 4647 VBP1 (ENSUAMG00000023019) #22 ENSUAMG00000023025 RAB39B (ENSUAMG00000023026) CLIC2 (ENSUAMG00000023027) ENSUAMG00000023029 Giant Panda MODERN SPECIES 2288 IKBKG (ENSAMEG00000000410) ENSAMEG00000019272 ENSAMEG00000019282 GAB3 (ENSAMEG00000001366) DKC1 (ENSAMEG00000002776) MPP1 (ENSAMEG00000002802) SMIM9 (ENSAMEG00000028154) F8 (ENSAMEG00000002491) ENSAMEG00000028778 FUNDC2 (ENSAMEG00000011956) ENSAMEG00000024837 CMC4 (ENSAMEG00000011961) MTCP1 (ENSAMEG00000028878) BRCC3 (ENSAMEG00000011969) ENSAMEG00000011976 VBP1 (ENSAMEG00000030279) #22 ENSAMEG00000028809 RAB39B (ENSAMEG00000009075) CLIC2 (ENSAMEG00000009077) ENSAMEG00000026904 ENSAMEG00000025129 TMLHE (ENSAMEG00000013789) ENSAMEG00000006387 Mustelinae ANCESTRAL SPECIES 168 ENSGT01030000235238.d ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a ENSGT00390000012647 ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a American mink MODERN SPECIES 556 ENSNVIG00000011778 FUNDC2 (ENSNVIG00000011768) MTCP1 (ENSNVIG00000011747) CMC4 (ENSNVIG00000011740) BRCC3 (ENSNVIG00000011655) ENSNVIG00000011635 VBP1 (ENSNVIG00000011591) #22 RAB39B (ENSNVIG00000011584) CLIC2 (ENSNVIG00000011570) ENSNVIG00000011553 TMLHE (ENSNVIG00000011500) Ferret DUPLICATION Ferret MODERN SPECIES 183 MYOZ2 (ENSMPUG00000017430) USP53 (ENSMPUG00000017422) FABP2 (ENSMPUG00000017421) PDE5A (ENSMPUG00000017420) ENSMPUG00000017417 MAD2L1 (ENSMPUG00000017416) PRDM5 (ENSMPUG00000017415) NDNF (ENSMPUG00000017414) TNIP3 (ENSMPUG00000017413) QRFPR (ENSMPUG00000017412) ANXA5 (ENSMPUG00000017411) EXOSC9 (ENSMPUG00000017410) CCNA2 (ENSMPUG00000017407) BBS7 (ENSMPUG00000017404) TRPC3 (ENSMPUG00000017402) ENSMPUG00000017399 #22 BLTP1 (ENSMPUG00000017395) ADAD1 (ENSMPUG00000017394) IL2 (ENSMPUG00000017393) IL21 (ENSMPUG00000017391) ENSMPUG00000018974 ENSMPUG00000017388 BBS12 (ENSMPUG00000018971) FGF2 (ENSMPUG00000017387) NUDT6 (ENSMPUG00000017386) SPATA5 (ENSMPUG00000017385) SPRY1 (ENSMPUG00000018965) ENSMPUG00000017384 ANKRD50 (ENSMPUG00000017383) FAT4 (ENSMPUG00000017382) INTU (ENSMPUG00000017381) Ferret MODERN SPECIES 463 ENSMPUG00000016150 DUSP9 (ENSMPUG00000016151) PNCK (ENSMPUG00000016148) ENSMPUG00000016146 ENSMPUG00000019549 ENSMPUG00000019547 ENSMPUG00000019545 ENSMPUG00000016145 ENSMPUG00000019543 GAB3 (ENSMPUG00000016143) MPP1 (ENSMPUG00000016141) F8 (ENSMPUG00000016139) DKC1 (ENSMPUG00000016136) BRCC3 (ENSMPUG00000016134) ENSMPUG00000016133 ENSMPUG00000016131 #22 RAB39B (ENSMPUG00000016129) CLIC2 (ENSMPUG00000016128) ENSMPUG00000019541 TMLHE (ENSMPUG00000016127) ENSMPUG00000016113 Canidae ANCESTRAL SPECIES 50 ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.h ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.a ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.h ENSGT00410000025802.g.b.k ENSGT00940000159803 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 ENSGT00390000016992.m ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a ENSGT00390000012647.a ENSGT00390000000360.r.c.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Dog MODERN SPECIES 144 G6PD (ENSCAFG00845029388) IKBKG (ENSCAFG00845029634) cOR7R1 (ENSCAFG00845029673) ENSCAFG00845029686 ENSCAFG00845029697 LAGE3 (ENSCAFG00845029708) ENSCAFG00845029817 DKC1 (ENSCAFG00845029852) MPP1 (ENSCAFG00845029936) F8 (ENSCAFG00845030098) ENSCAFG00845030269 ENSCAFG00845030278 FUNDC2 (ENSCAFG00845030300) CMC4 (ENSCAFG00845030338) MTCP1 (ENSCAFG00845030350) VBP1 (ENSCAFG00845017867) #22 RAB39B (ENSCAFG00845017965) CLIC2 (ENSCAFG00845017998) ENSCAFG00845018126 SPRY3 (ENSCAFG00845018191) VAMP7 (ENSCAFG00845018278) ENSCAFG00845018459 Dingo MODERN SPECIES 383 ENSCAFG00020008988 ENSCAFG00020008985 ENSCAFG00020008976 ENSCAFG00020008968 ENSCAFG00020008959 ENSCAFG00020008942 ENSCAFG00020008918 MPP1 (ENSCAFG00020008744) ENSCAFG00020008739 ENSCAFG00020008736 F8 (ENSCAFG00020008704) FUNDC2 (ENSCAFG00020008699) MTCP1 (ENSCAFG00020008697) CMC4 (ENSCAFG00020008696) ENSCAFG00020008684 VBP1 (ENSCAFG00020008675) #22 RAB39B (ENSCAFG00020008673) CLIC2 (ENSCAFG00020008670) ENSCAFG00020008667 ENSCAFG00020008665 ENSCAFG00020008663 TMLHE (ENSCAFG00020008661) ENSCAFG00020008659 SPRY3 (ENSCAFG00020008657) VAMP7 (ENSCAFG00020008654) Red fox DUPLICATION Red fox MODERN SPECIES 20 ENSVVUG00000020739 DKC1 (ENSVVUG00000020734) MPP1 (ENSVVUG00000020728) F8 (ENSVVUG00000020717) FUNDC2 (ENSVVUG00000020713) CMC4 (ENSVVUG00000020710) MTCP1 (ENSVVUG00000020711) ENSVVUG00000020709 ENSVVUG00000020707 ENSVVUG00000020703 #22 ADAP2 (ENSVVUG00000020701) RNF135 (ENSVVUG00000020698) ENSVVUG00000020695 RHOT1 (ENSVVUG00000020640) RHBDL3 (ENSVVUG00000020629) CUNH17orf75 (ENSVVUG00000020625) ZNF207 (ENSVVUG00000020618) PSMD11 (ENSVVUG00000020613) CDK5R1 (ENSVVUG00000020611) MYO1D (ENSVVUG00000020589) TMEM98 (ENSVVUG00000020587) SPACA3 (ENSVVUG00000020586) ASIC2 (ENSVVUG00000020562) ENSVVUG00000020545 CCL2 (ENSVVUG00000020543) Red fox MODERN SPECIES 121 LGALS9 (ENSVVUG00000015869) KSR1 (ENSVVUG00000015399) WSB1 (ENSVVUG00000015381) ENSVVUG00000015375 OMG (ENSVVUG00000015373) EVI2B (ENSVVUG00000015368) EVI2A (ENSVVUG00000015363) NF1 (ENSVVUG00000012588) RAB11FIP4 (ENSVVUG00000012277) COPRS (ENSVVUG00000012255) UTP6 (ENSVVUG00000012238) SUZ12 (ENSVVUG00000012214) CRLF3 (ENSVVUG00000012205) ATAD5 (ENSVVUG00000012156) TEFM (ENSVVUG00000012150) ENSVVUG00000012145 #22 RAB39B (ENSVVUG00000012142) CLIC2 (ENSVVUG00000012140) Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 Equus ANCESTRAL SPECIES 52 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.g.b.n ENSGT00410000025802.g.b.m ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 Horse MODERN SPECIES 480 ENSECAG00000033189 ENSECAG00000029643 ENSECAG00000056189 ENSECAG00000031652 GAB3 (ENSECAG00000023348) DKC1 (ENSECAG00000023524) MPP1 (ENSECAG00000009595) F8 (ENSECAG00000015044) ENSECAG00000033114 ENSECAG00000054244 ENSECAG00000029708 ENSECAG00000058802 FUNDC2 (ENSECAG00000026822) MTCP1 (ENSECAG00000043072) BRCC3 (ENSECAG00000021441) VBP1 (ENSECAG00000001468) #22 ENSECAG00000047761 ENSECAG00000053801 RAB39B (ENSECAG00000007380) CLIC2 (ENSECAG00000008024) TMLHE (ENSECAG00000012334) SPRY3 (ENSECAG00000058224) ENSECAG00000027923 ENSECAG00000030972 VAMP7 (ENSECAG00000014117) Donkey MODERN SPECIES 36 ENSEASG00005027434 ENSEASG00005031374 ENSEASG00005028284 ENSEASG00005034297 ENSEASG00005032503 ENSEASG00005033034 ENSEASG00005007484 MPP1 (ENSEASG00005007482) SMIM9 (ENSEASG00005025831) ENSEASG00005033689 ENSEASG00005004499 ENSEASG00005034088 ENSEASG00005036735 MTCP1 (ENSEASG00005004486) BRCC3 (ENSEASG00005004482) VBP1 (ENSEASG00005035328) #22 RAB39B (ENSEASG00005034031) ENSEASG00005024036 ENSEASG00005001752 ENSEASG00005001750 ENSEASG00005038101 ENSEASG00005011059 ENSEASG00005011061 ENSEASG00005036960 ENSEASG00005035090 TCEAL1 (ENSEASG00005025524) MORF4L2 (ENSEASG00005002526) ENSEASG00005002530 TMEM31 (ENSEASG00005002551) PLP1 (ENSEASG00005002561) ENSEASG00005029160 Chiroptera ANCESTRAL SPECIES 48 ENSGT01030000238159 ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.c.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Megabat MODERN SPECIES 2670 CMC4 (ENSPVAG00000016848) MTCP1 (ENSPVAG00000016849) BRCC3 (ENSPVAG00000016850) VBP1 (ENSPVAG00000016852) #22 RAB39B (ENSPVAG00000016854) Microchiroptera ANCESTRAL SPECIES 45 ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT01050000244815.B.a.a ENSGT01030000238159 ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000162988 ENSGT00940000163246 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.a.a ENSGT00950000182925.D.a.b.b Greater horseshoe bat MODERN SPECIES ENSRFEG00010002963 ENSRFEG00010002921 ENSRFEG00010002889 ENSRFEG00010002860 GAB3 (ENSRFEG00010002752) DKC1 (ENSRFEG00010002621) MPP1 (ENSRFEG00010002502) SMIM9 (ENSRFEG00010002415) ENSRFEG00010002379 ENSRFEG00010002358 F8 (ENSRFEG00010002258) FUNDC2 (ENSRFEG00010002186) MTCP1 (ENSRFEG00010000401) BRCC3 (ENSRFEG00010000187) ENSRFEG00010000146 VBP1 (ENSRFEG00010000140) #22 RAB39B (ENSRFEG00010000135) CLIC2 (ENSRFEG00010000129) ENSRFEG00010000120 ENSRFEG00010000099 ENSRFEG00010000092 TMLHE (ENSRFEG00010000091) SPRY3 (ENSRFEG00010000089) VAMP7 (ENSRFEG00010000088) ENSRFEG00010000087 ENSRFEG00010000086 ENSRFEG00010000085 ENSRFEG00010000084 FAAH2 (ENSRFEG00010000083) ENSRFEG00010000082 ENSRFEG00010000081 Microbat MODERN SPECIES 1106 ENSMLUG00000022546 ENSMLUG00000025092 GAB3 (ENSMLUG00000007763) DKC1 (ENSMLUG00000011918) MPP1 (ENSMLUG00000011938) F8 (ENSMLUG00000002117) ENSMLUG00000007776 CMC4 (ENSMLUG00000024035) MTCP1 (ENSMLUG00000003916) BRCC3 (ENSMLUG00000005420) VBP1 (ENSMLUG00000015396) #22 RAB39B (ENSMLUG00000007660) CLIC2 (ENSMLUG00000002374) ENSMLUG00000029102 ENSMLUG00000025178 ENSMLUG00000022365 SPRY3 (ENSMLUG00000022306) VAMP7 (ENSMLUG00000012765) ENSMLUG00000011370 ENSMLUG00000025240 FAAH2 (ENSMLUG00000017725) ENSMLUG00000002732 ENSMLUG00000006656 SPIN3 (ENSMLUG00000015431) ENSMLUG00000004357 UBQLN2 (ENSMLUG00000007552) Artiodactyla ANCESTRAL SPECIES 9 ENSGT00410000025802.g.b ENSGT01030000235238 ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 Suina ANCESTRAL SPECIES 7 ENSGT00730000111022 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00390000016992 ENSGT00940000163020 ENSGT00940000160294 ENSGT00390000005685 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 Pig MODERN SPECIES 300 G6PD (ENSSSCG00000025108) IKBKG (ENSSSCG00000012825) ENSSSCG00000012827 ENSSSCG00000049540 GAB3 (ENSSSCG00000012824) DKC1 (ENSSSCG00000012823) F8 (ENSSSCG00000012822) SMIM9 (ENSSSCG00000055917) ENSSSCG00000057758 ENSSSCG00000054901 FUNDC2 (ENSSSCG00000012817) CMC4 (ENSSSCG00000062015) MTCP1 (ENSSSCG00000012816) BRCC3 (ENSSSCG00000012813) ENSSSCG00000012812 VBP1 (ENSSSCG00000012811) #22 RAB39B (ENSSSCG00000024233) ENSSSCG00000057979 ENSSSCG00000055307 CLIC2 (ENSSSCG00000039998) ENSSSCG00000063292 TMLHE (ENSSSCG00000038442) ENSSSCG00000035312 SPRY3 (ENSSSCG00000034345) VAMP7 (ENSSSCG00000029615) Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 44 IKBKG (ENSCWAG00000000145) ENSCWAG00000000203 ENSCWAG00000000223 ENSCWAG00000000236 GAB3 (ENSCWAG00000000272) DKC1 (ENSCWAG00000000314) MPP1 (ENSCWAG00000000412) SMIM9 (ENSCWAG00000000458) ENSCWAG00000000473 ENSCWAG00000000488 ENSCWAG00000000499 FUNDC2 (ENSCWAG00000000516) CMC4 (ENSCWAG00000000535) MTCP1 (ENSCWAG00000000545) BRCC3 (ENSCWAG00000000584) ENSCWAG00000000727 #22 RAB39B (ENSCWAG00000000758) CLIC2 (ENSCWAG00000000773) ENSCWAG00000000788 ENSCWAG00000000796 TMLHE (ENSCWAG00000000814) ENSCWAG00000000835 SPRY3 (ENSCWAG00000000847) ENSCWAG00000000859 VAMP7 (ENSCWAG00000000883) ENSCWAG00000000908 ENSCWAG00000000922 ENSCWAG00000000971 Chacoan peccary MODERN SPECIES 950 GPR62 (ENSCWAG00000012500) PARP3 (ENSCWAG00000012452) RRP9 (ENSCWAG00000012415) IQCF1 (ENSCWAG00000012365) IQCF5 (ENSCWAG00000012338) IQCF2 (ENSCWAG00000012302) IQCF3 (ENSCWAG00000012249) ENSCWAG00000012222 IQCF6 (ENSCWAG00000012162) GRM2 (ENSCWAG00000011986) TEX264 (ENSCWAG00000011911) RAD54L2 (ENSCWAG00000011847) DCAF1 (ENSCWAG00000021359) RBM15B (ENSCWAG00000021353) MANF (ENSCWAG00000021349) ENSCWAG00000021342 #22 DOCK3 (ENSCWAG00000021297) MAPKAPK3 (ENSCWAG00000021277) CISH (ENSCWAG00000021269) HEMK1 (ENSCWAG00000021261) C3orf18 (ENSCWAG00000021250) CACNA2D2 (ENSCWAG00000020731) TMEM115 (ENSCWAG00000020681) CYB561D2 (ENSCWAG00000020669) NPRL2 (ENSCWAG00000020648) ZMYND10 (ENSCWAG00000020600) RASSF1 (ENSCWAG00000020553) TUSC2 (ENSCWAG00000020538) HYAL2 (ENSCWAG00000020509) HYAL1 (ENSCWAG00000020497) NAA80 (ENSCWAG00000020487) Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00410000025802.g.b ENSGT01030000235238 ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00960000186859 ENSGT00410000025802.g.b ENSGT01030000235238 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Pecora ANCESTRAL SPECIES 28 ENSGT01030000235238.e.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020.bb ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 Percora_a ANCESTRAL SPECIES 30 ENSGT01030000235238.e.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020.bb ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 Bovidae ANCESTRAL SPECIES 29 ENSGT01030000235238.e.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000163020.bb ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000161825.v.a.a.b ENSGT00960000188264.C ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 Caprinae ANCESTRAL SPECIES 53 ENSGT00940000159611 ENSGT00390000000141 ENSGT00950000182994.A.n.a ENSGT00390000001134.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000163020.bb ENSGT00940000161397 ENSGT00950000183055.a.b ENSGT00530000063582.a ENSGT00510000047733 ENSGT00940000161825.v.a.a.b ENSGT00960000188264.C Rambouillet Sheep MODERN SPECIES 205 DACH2 (ENSOARG00020021981) ENSOARG00020022547 ENSOARG00020022607 ENSOARG00020022613 ENSOARG00020022631 GAB3 (ENSOARG00020015493) DKC1 (ENSOARG00020015553) MPP1 (ENSOARG00020015726) SMIM9 (ENSOARG00020015879) F8 (ENSOARG00020015985) ENSOARG00020016962 FUNDC2 (ENSOARG00020017001) CMC4 (ENSOARG00020017081) MTCP1 (ENSOARG00020017110) BRCC3 (ENSOARG00020017169) VBP1 (ENSOARG00020017496) #22 RAB39B (ENSOARG00020017597) ENSOARG00020017633 ENSOARG00020017655 RIDA (ENSOARG00020017680) CLIC2 (ENSOARG00020017713) SPRY3 (ENSOARG00020017989) VAMP7 (ENSOARG00020018024) ENSOARG00020018236 ENSOARG00020018387 ENSOARG00020018399 ENSOARG00020018429 ENSOARG00020018446 ENSOARG00020018476 ENSOARG00020018489 ENSOARG00020018504 Goat MODERN SPECIES 36 ENSCHIG00000015970 VBP1 (ENSCHIG00000019363) #22 RAB39B (ENSCHIG00000000158) ENSCHIG00000018644 ENSCHIG00000000266 CLIC2 (ENSCHIG00000016619) ENSCHIG00000000748 TMLHE (ENSCHIG00000000055) VAMP7 (ENSCHIG00000000128) Bovinae ANCESTRAL SPECIES 42 ENSGT01030000235238.e.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a ENSGT00940000161825.v.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 Bos ANCESTRAL SPECIES 36 ENSGT00940000162887 ENSGT01030000234522.C.b.e.a.a.a.a.a.b ENSGT00940000154488.B ENSGT00390000001700.a.b.b.a.a ENSGT01030000235238.e.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00390000000673.b.yb.a ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a ENSGT00390000012182.i.b ENSGT00940000161825.v.b ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 Bos_b ANCESTRAL SPECIES 31 ENSGT00390000003937 ENSGT00940000162887 ENSGT01030000234522.C.b.e.a.a.a.a.a.b ENSGT00940000154488.B ENSGT00390000001700.a.b.b.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00390000000673.b.yb.a ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a ENSGT00390000012182.i.b ENSGT00940000161825.v.b ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 Hybrid Bos Indicus MODERN SPECIES 315 HAUS7 (ENSBIXG00005001172) ENSBIXG00005011766 ENSBIXG00005011758 ENSBIXG00005001157 ENSBIXG00005011731 GAB3 (ENSBIXG00005011700) DKC1 (ENSBIXG00005011665) MPP1 (ENSBIXG00005011616) F8 (ENSBIXG00005006715) ENSBIXG00005011325 FUNDC2 (ENSBIXG00005006322) CMC4 (ENSBIXG00005001057) MTCP1 (ENSBIXG00005011273) BRCC3 (ENSBIXG00005001036) ENSBIXG00005011073 VBP1 (ENSBIXG00005011035) #22 ENSBIXG00005010980 RAB39B (ENSBIXG00005010970) ENSBIXG00005010957 ENSBIXG00005000980 CLIC2 (ENSBIXG00005010938) ENSBIXG00005010929 TMLHE (ENSBIXG00005000964) ENSBIXG00005010854 SPRY3 (ENSBIXG00005010830) VAMP7 (ENSBIXG00005010795) ENSBIXG00005010749 ENSBIXG00005010717 ENSBIXG00005000928 ENSBIXG00005000922 ENSBIXG00005010675 Cow MODERN SPECIES 177 HAUS7 (ENSBTAG00000014095) ENSBTAG00000050830 ENSBTAG00000047917 ENSBTAG00000020185 ENSBTAG00000023820 GAB3 (ENSBTAG00000013044) DKC1 (ENSBTAG00000013045) MPP1 (ENSBTAG00000013046) ENSBTAG00000033167 F8 (ENSBTAG00000010726) FUNDC2 (ENSBTAG00000016977) CMC4 (ENSBTAG00000007813) MTCP1 (ENSBTAG00000045697) BRCC3 (ENSBTAG00000007817) ENSBTAG00000011144 VBP1 (ENSBTAG00000017265) #22 ENSBTAG00000052586 RAB39B (ENSBTAG00000019779) ENSBTAG00000023978 CLIC2 (ENSBTAG00000010948) TMLHE (ENSBTAG00000011648) SPRY3 (ENSBTAG00000010245) VAMP7 (ENSBTAG00000049615) ZNF185 (ENSBTAG00000005776) NSDHL (ENSBTAG00000009231) CETN2 (ENSBTAG00000007844) GABRQ (ENSBTAG00000013002) ENSBTAG00000048998 GABRA3 (ENSBTAG00000006691) ENSBTAG00000012748 GABRE (ENSBTAG00000013548) Bos_a ANCESTRAL SPECIES 39 ENSGT00390000003937 ENSGT00940000162887 ENSGT01030000234522.C.b.e.a.a.a.a.a.b ENSGT00940000154488.B ENSGT00390000001700.a.b.b.a.a ENSGT01030000235238.e.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00390000000673.b.yb.a ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a Domestic yak MODERN SPECIES 69 ENSBGRG00000018441 ENSBGRG00000018361 ENSBGRG00000018336 GAB3 (ENSBGRG00000018202) DKC1 (ENSBGRG00000017777) MPP1 (ENSBGRG00000017459) ENSBGRG00000017426 ENSBGRG00000017378 F8 (ENSBGRG00000024985) FUNDC2 (ENSBGRG00000024951) ENSBGRG00000024933 MTCP1 (ENSBGRG00000024911) BRCC3 (ENSBGRG00000024843) ENSBGRG00000024824 ENSBGRG00000024794 VBP1 (ENSBGRG00000024762) #22 ENSBGRG00000024744 RAB39B (ENSBGRG00000024738) ENSBGRG00000024735 CLIC2 (ENSBGRG00000024695) TMLHE (ENSBGRG00000024645) SPRY3 (ENSBGRG00000024611) VAMP7 (ENSBGRG00000024507) ENSBGRG00000024491 ENSBGRG00000024481 ENSBGRG00000024460 ENSBGRG00000024444 ENSBGRG00000024428 ENSBGRG00000024396 MTM1 (ENSBGRG00000024246) MTMR1 (ENSBGRG00000023860) Wild yak MODERN SPECIES 1108 GAB3 (ENSBMUG00000006895) DKC1 (ENSBMUG00000006907) MPP1 (ENSBMUG00000006975) F8 (ENSBMUG00000007027) FUNDC2 (ENSBMUG00000007050) CMC4 (ENSBMUG00000007064) MTCP1 (ENSBMUG00000007077) BRCC3 (ENSBMUG00000007115) ENSBMUG00000007145 VBP1 (ENSBMUG00000007185) #22 RAB39B (ENSBMUG00000007199) American bison MODERN SPECIES 2773 VBP1 (ENSBBBG00000025267) #22 ENSBBBG00000025286 Siberian musk deer MODERN SPECIES 67 ENSMMSG00000011090 GAB3 (ENSMMSG00000011112) DKC1 (ENSMMSG00000011162) MPP1 (ENSMMSG00000011258) SMIM9 (ENSMMSG00000011384) F8 (ENSMMSG00000011419) ENSMMSG00000011482 CMC4 (ENSMMSG00000011510) MTCP1 (ENSMMSG00000011532) BRCC3 (ENSMMSG00000011560) VBP1 (ENSMMSG00000011660) #22 RAB39B (ENSMMSG00000011708) ENSMMSG00000011732 CLIC2 (ENSMMSG00000011739) ENSMMSG00000011761 TMLHE (ENSMMSG00000011781) ENSMMSG00000011850 SPRY3 (ENSMMSG00000011861) VAMP7 (ENSMMSG00000011884) ENSMMSG00000012009 ENSMMSG00000013968 ENSMMSG00000013979 ENSMMSG00000014004 Cetacea ANCESTRAL SPECIES 19 ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Odontoceti ANCESTRAL SPECIES 19 ENSGT00530000063808.a ENSGT00410000025802.g.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Sperm whale MODERN SPECIES 13 FAM50A (ENSPCTG00005014324) GDI1 (ENSPCTG00005014385) IKBKG (ENSPCTG00005014430) ENSPCTG00005014674 GAB3 (ENSPCTG00005014727) DKC1 (ENSPCTG00005014862) MPP1 (ENSPCTG00005014958) SMIM9 (ENSPCTG00005015221) F8 (ENSPCTG00005015296) ENSPCTG00005015667 F8A1 (ENSPCTG00005015687) FUNDC2 (ENSPCTG00005015711) CMC4 (ENSPCTG00005015746) MTCP1 (ENSPCTG00005015780) BRCC3 (ENSPCTG00005015822) VBP1 (ENSPCTG00005016073) #22 RAB39B (ENSPCTG00005016182) ENSPCTG00005016223 CLIC2 (ENSPCTG00005016241) ENSPCTG00005016292 TMLHE (ENSPCTG00005016307) ENSPCTG00005016361 SPRY3 (ENSPCTG00005016380) ENSPCTG00005016415 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00530000063808.a ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020.y ENSGT00390000016992.x ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00390000016992.w ENSGT00940000163020.z ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Monodontidae ANCESTRAL SPECIES 19 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00960000186859 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020.z ENSGT00390000016992.w ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00390000016992.x ENSGT00940000161397 ENSGT00940000163020.y ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 Beluga whale MODERN SPECIES 139 G6PD (ENSDLEG00000011468) IKBKG (ENSDLEG00000011500) ENSDLEG00000011523 ENSDLEG00000011545 GAB3 (ENSDLEG00000011559) DKC1 (ENSDLEG00000011603) MPP1 (ENSDLEG00000011647) F8 (ENSDLEG00000011690) ENSDLEG00000011965 ENSDLEG00000011977 FUNDC2 (ENSDLEG00000011985) CMC4 (ENSDLEG00000011999) MTCP1 (ENSDLEG00000012008) BRCC3 (ENSDLEG00000012025) ENSDLEG00000012046 VBP1 (ENSDLEG00000012075) #22 RAB39B (ENSDLEG00000012091) ENSDLEG00000012094 CLIC2 (ENSDLEG00000012100) TMLHE (ENSDLEG00000012114) ENSDLEG00000012124 SPRY3 (ENSDLEG00000012130) VAMP7 (ENSDLEG00000012138) Narwhal MODERN SPECIES 310 ENSMMNG00015013602 ENSMMNG00015013606 GAB3 (ENSMMNG00015013614) DKC1 (ENSMMNG00015013634) MPP1 (ENSMMNG00015013674) SMIM9 (ENSMMNG00015013706) F8 (ENSMMNG00015013732) ENSMMNG00015013765 ENSMMNG00015013774 ENSMMNG00015013784 CMC4 (ENSMMNG00015013793) MTCP1 (ENSMMNG00015013799) BRCC3 (ENSMMNG00015013819) ENSMMNG00015013846 VBP1 (ENSMMNG00015013861) #22 RAB39B (ENSMMNG00015013876) CLIC2 (ENSMMNG00015013884) ENSMMNG00015013897 TMLHE (ENSMMNG00015013910) ENSMMNG00015013925 SPRY3 (ENSMMNG00015013931) VAMP7 (ENSMMNG00015013948) DUSP22 (ENSMMNG00015013987) IRF4 (ENSMMNG00015014004) EXOC2 (ENSMMNG00015014030) FOXF2 (ENSMMNG00015014085) FOXC1 (ENSMMNG00015014093) GMDS (ENSMMNG00015014105) ENSMMNG00015010189 MYLK4 (ENSMMNG00015010218) Vaquita MODERN SPECIES 34 ENSPSNG00000022407 ENSPSNG00000022414 ENSPSNG00000022416 GAB3 (ENSPSNG00000022421) DKC1 (ENSPSNG00000022426) MPP1 (ENSPSNG00000022439) SMIM9 (ENSPSNG00000022452) F8 (ENSPSNG00000022465) ENSPSNG00000022473 ENSPSNG00000022476 ENSPSNG00000022480 MTCP1 (ENSPSNG00000022484) CMC4 (ENSPSNG00000013473) BRCC3 (ENSPSNG00000013597) ENSPSNG00000013729 VBP1 (ENSPSNG00000013871) #22 RAB39B (ENSPSNG00000014023) ENSPSNG00000014068 CLIC2 (ENSPSNG00000014084) ENSPSNG00000014126 TMLHE (ENSPSNG00000014201) ENSPSNG00000014251 ENSPSNG00000014269 SPRY3 (ENSPSNG00000014299) VAMP7 (ENSPSNG00000014345) Dolphin MODERN SPECIES 6143 VBP1 (ENSTTRG00000016258) #22 RAB39B (ENSTTRG00000016260) Blue whale MODERN SPECIES 40 IKBKG (ENSBMSG00010021344) ENSBMSG00010021370 ENSBMSG00010021382 ENSBMSG00010021407 DKC1 (ENSBMSG00010021430) MPP1 (ENSBMSG00010021484) SMIM9 (ENSBMSG00010021513) F8 (ENSBMSG00010021526) ENSBMSG00010021588 ENSBMSG00010021592 ENSBMSG00010021604 CMC4 (ENSBMSG00010021610) MTCP1 (ENSBMSG00010021613) BRCC3 (ENSBMSG00010021621) ENSBMSG00010021641 VBP1 (ENSBMSG00010021651) #22 RAB39B (ENSBMSG00010021663) ENSBMSG00010021665 ENSBMSG00010021668 CLIC2 (ENSBMSG00010021672) ENSBMSG00010021679 TMLHE (ENSBMSG00010021682) ENSBMSG00010021687 SPRY3 (ENSBMSG00010021692) VAMP7 (ENSBMSG00010021700) Camelidae ANCESTRAL SPECIES 107 ENSGT00410000025802.h.d ENSGT00410000025802.g.b.b ENSGT00410000025802.h.c ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000163020 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Arabian camel MODERN SPECIES 204 IKBKG (ENSCDRG00005016363) ENSCDRG00005016489 ENSCDRG00005016521 ENSCDRG00005016563 ENSCDRG00005016586 GAB3 (ENSCDRG00005016636) ENSCDRG00005017097 DKC1 (ENSCDRG00005017117) MPP1 (ENSCDRG00005017184) SMIM9 (ENSCDRG00005017392) F8 (ENSCDRG00005017422) ENSCDRG00005017538 CMC4 (ENSCDRG00005017574) MTCP1 (ENSCDRG00005017604) BRCC3 (ENSCDRG00005017635) VBP1 (ENSCDRG00005017794) #22 RAB39B (ENSCDRG00005017901) ENSCDRG00005018049 CLIC2 (ENSCDRG00005018062) TMLHE (ENSCDRG00005018097) SPRY3 (ENSCDRG00005018145) VAMP7 (ENSCDRG00005018159) ENSCDRG00005018222 Alpaca MODERN SPECIES 5665 VBP1 (ENSVPAG00000010239) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000018904 #22 Common shrew MODERN SPECIES 3870 ENSSARG00000004386 #22 Hedgehog MODERN SPECIES 5011 ENSEEUG00000006520 #22 Atlantogenata ANCESTRAL SPECIES 70 ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360 ENSGT00950000183068.a.a ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00950000183055.a.b ENSGT00510000047733 Afrotheria ANCESTRAL SPECIES 82 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360 ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Tenrec MODERN SPECIES 4843 VBP1 (ENSETEG00000017655) #22 Afrotheria_a ANCESTRAL SPECIES 81 ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT01050000244815.B.a.a ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360 ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 Hyrax MODERN SPECIES 4106 VBP1 (ENSPCAG00000003262) #22 Elephant MODERN SPECIES 50 FAM3A (ENSLAFG00000032131) G6PD (ENSLAFG00000010694) IKBKG (ENSLAFG00000026529) ENSLAFG00000010146 ENSLAFG00000028603 GAB3 (ENSLAFG00000001708) DKC1 (ENSLAFG00000000221) MPP1 (ENSLAFG00000011928) SMIM9 (ENSLAFG00000032056) ENSLAFG00000003610 F8 (ENSLAFG00000015274) ENSLAFG00000015289 CMC4 (ENSLAFG00000020599) MTCP1 (ENSLAFG00000028512) BRCC3 (ENSLAFG00000013564) VBP1 (ENSLAFG00000016507) #22 RAB39B (ENSLAFG00000030959) CLIC2 (ENSLAFG00000011243) ENSLAFG00000032481 TMLHE (ENSLAFG00000011892) ENSLAFG00000012249 SPRY3 (ENSLAFG00000029407) VAMP7 (ENSLAFG00000018052) ENSLAFG00000027692 Xenarthra ANCESTRAL SPECIES 1495 ENSGT00390000018904 #22 ENSGT00940000158132 ENSGT00940000161397 Armadillo DUPLICATION Armadillo MODERN SPECIES 3500 ENSDNOG00000039370 HMBOX1 (ENSDNOG00000031840) INTS9 (ENSDNOG00000003821) ENSDNOG00000034956 #22 EXTL3 (ENSDNOG00000018822) Armadillo MODERN SPECIES 2293 VBP1 (ENSDNOG00000044322) #22 RAB39B (ENSDNOG00000033622) CLIC2 (ENSDNOG00000030705)