Theria	ANCESTRAL SPECIES		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00950000183019.e
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00900000143483	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Carnivora	ANCESTRAL SPECIES	15	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Caniformia	ANCESTRAL SPECIES	11		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000156415.g.a	ENSGT00940000156591 #7	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Canis_lupus	ANCESTRAL SPECIES	29	ENSGT00940000156591 #7	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000170921 #12	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h.wc.a.a #14	ENSGT00940000154451.k.a #15	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00950000185351	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00390000004871.b.k.a.b #23	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00900000143483	ENSGT00940000153430.a.b.m.a #31	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36
Dog	MODERN SPECIES	7	PSD3 (ENSCAFG00845015621) #7	VIPR2 (ENSCAFG00845015325) #8	DYNC2I1 (ENSCAFG00845015030) #9	ESYT2 (ENSCAFG00845014771) #10	NCAPG2 (ENSCAFG00845014534) #11	ENSCAFG00845014453 #12	ENSCAFG00845014242 #13	ENSCAFG00845014143 #14	ENSCAFG00845014120 #15	UBE3C (ENSCAFG00845013835) #16	MNX1 (ENSCAFG00845013721) #17	ENSCAFG00845013708 #18	NOM1 (ENSCAFG00845013684) #19	LMBR1 (ENSCAFG00845013513) #20	RNF32 (ENSCAFG00845013361) #21	SHH (ENSCAFG00845013237) #22	ENSCAFG00845013219 #23	RBM33 (ENSCAFG00845013111) #24	ENSCAFG00845013046 #25	EN2 (ENSCAFG00845013024) #26	INSIG1 (ENSCAFG00845012993) #27	HTR5A (ENSCAFG00845012951) #28	PAXIP1 (ENSCAFG00845012859) #29	DPP6 (ENSCAFG00845012287) #30	ENSCAFG00845011964 #31	ACTR3B (ENSCAFG00845011785) #32	XRCC2 (ENSCAFG00845011729) #33	CCT8L2 (ENSCAFG00845011714) #34	ENSCAFG00845011655 #35	GALNT11 (ENSCAFG00845011586) #36	GALNTL5 (ENSCAFG00845011511) #37
Dingo	MODERN SPECIES	77	ENSCAFG00020004471 #7	ENSCAFG00020004516 #8	DYNC2I1 (ENSCAFG00020004534) #9	ESYT2 (ENSCAFG00020004561) #10	NCAPG2 (ENSCAFG00020004956) #11	ENSCAFG00020005023	ENSCAFG00020005041	ENSCAFG00020005045 #14	ENSCAFG00020005075 #15	UBE3C (ENSCAFG00020005079) #16	MNX1 (ENSCAFG00020005107) #17	NOM1 (ENSCAFG00020005121) #19	ENSCAFG00020005139	LMBR1 (ENSCAFG00020005146) #20	RNF32 (ENSCAFG00020005170) #21	SHH (ENSCAFG00020005208) #22	ENSCAFG00020005221 #24	ENSCAFG00020005230 #24	ENSCAFG00020005234 #23	ENSCAFG00020005253 #25	EN2 (ENSCAFG00020005257) #26	INSIG1 (ENSCAFG00020005265) #27	HTR5A (ENSCAFG00020005282) #28	PAXIP1 (ENSCAFG00020005286) #29	DPP6 (ENSCAFG00020005314) #30	ENSCAFG00020005333	ENSCAFG00020005341 #31	ENSCAFG00020005358 #32	XRCC2 (ENSCAFG00020005366) #33	CCT8L2 (ENSCAFG00020005377) #34	KMT2C (ENSCAFG00020005391)
Red fox	MODERN SPECIES	14	ENSVVUG00000001249	VIPR2 (ENSVVUG00000001261) #8	WDR60 (ENSVVUG00000001269) #9	ESYT2 (ENSVVUG00000001366) #10	NCAPG2 (ENSVVUG00000002127) #11	PTPRN2 (ENSVVUG00000002340) #13	ENSVVUG00000002401	ENSVVUG00000002412	ENSVVUG00000002447	DNAJB6 (ENSVVUG00000002461) #14	UBE3C (ENSVVUG00000002515) #16	ENSVVUG00000002583	NOM1 (ENSVVUG00000002608) #19	LMBR1 (ENSVVUG00000002635) #20	RNF32 (ENSVVUG00000002673) #21	ENSVVUG00000002701 #22	RBM33 (ENSVVUG00000002713) #24	ENSVVUG00000002742 #25	INSIG1 (ENSVVUG00000002755) #27	HTR5A (ENSVVUG00000002770) #28	PAXIP1 (ENSVVUG00000002777) #29	DPP6 (ENSVVUG00000003048) #30	ENSVVUG00000007255 #32	XRCC2 (ENSVVUG00000007283) #33	CCT8L2 (ENSVVUG00000007289) #34	KMT2C (ENSVVUG00000007309)	GALNT11 (ENSVVUG00000007439) #36	GALNTL5 (ENSVVUG00000007452) #37	ENSVVUG00000007480	ENSVVUG00000007492	RHEB (ENSVVUG00000007512)
Caniformia_b	ANCESTRAL SPECIES	9		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00960000188704	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Ursidae	ANCESTRAL SPECIES	44			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00960000188704	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Giant Panda	MODERN SPECIES						ENSAMEG00000008448 #8	DYNC2I1 (ENSAMEG00000008422) #9	ESYT2 (ENSAMEG00000008384) #10	NCAPG2 (ENSAMEG00000008321) #11	ENSAMEG00000029513	DNAJB6 (ENSAMEG00000001332) #14	UBE3C (ENSAMEG00000001353) #16	MNX1 (ENSAMEG00000026181) #17	NOM1 (ENSAMEG00000001412) #19	LMBR1 (ENSAMEG00000001431) #20	RNF32 (ENSAMEG00000028945) #21	SHH (ENSAMEG00000028933) #22	RBM33 (ENSAMEG00000001198) #24	ENSAMEG00000031289	ENSAMEG00000029275 #26	INSIG1 (ENSAMEG00000001234) #27	HTR5A (ENSAMEG00000024151) #28	PAXIP1 (ENSAMEG00000001238) #29	DPP6 (ENSAMEG00000001268) #30	ENSAMEG00000013262 #32	XRCC2 (ENSAMEG00000013304) #33	ENSAMEG00000019534 #34	KMT2C (ENSAMEG00000013308)	GALNT11 (ENSAMEG00000013367) #36	GALNTL5 (ENSAMEG00000013380) #37	ENSAMEG00000013395	ENSAMEG00000031502
Ursus	ANCESTRAL SPECIES	116				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00960000188704	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
American black bear	MODERN SPECIES	666																ENSUAMG00000023241 #22	ENSUAMG00000023244 #24
Polar bear	MODERN SPECIES	151					VIPR2 (ENSUMAG00000013542) #8	DYNC2I1 (ENSUMAG00000013552) #9	ESYT2 (ENSUMAG00000013584) #10	NCAPG2 (ENSUMAG00000013800) #11	ENSUMAG00000013831	ENSUMAG00000013837	DNAJB6 (ENSUMAG00000013855) #14	UBE3C (ENSUMAG00000013926) #16	NOM1 (ENSUMAG00000014275) #19	LMBR1 (ENSUMAG00000014327) #20	RNF32 (ENSUMAG00000014380) #21	ENSUMAG00000014393 #22	RBM33 (ENSUMAG00000014407) #24	ENSUMAG00000014506 #25	ENSUMAG00000014512 #26	INSIG1 (ENSUMAG00000014523) #27	HTR5A (ENSUMAG00000014544) #28	PAXIP1 (ENSUMAG00000014568) #29	DPP6 (ENSUMAG00000014830) #30	ENSUMAG00000015998	ENSUMAG00000016012 #32	XRCC2 (ENSUMAG00000016029) #33	ENSUMAG00000016033 #35	ENSUMAG00000016055	GALNT11 (ENSUMAG00000016107) #36	GALNTL5 (ENSUMAG00000016112) #37	ENSUMAG00000016126
Mustelinae	ANCESTRAL SPECIES	79			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00960000188704	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Ferret	MODERN SPECIES	279	DYNC2I1 (ENSMPUG00000009941) #9	ESYT2 (ENSMPUG00000009832) #10	NCAPG2 (ENSMPUG00000009817) #11	ENSMPUG00000019974	PTPRN2 (ENSMPUG00000009804) #13	DNAJB6 (ENSMPUG00000009797) #14	UBE3C (ENSMPUG00000009787) #16	ENSMPUG00000009780	ENSMPUG00000009775	ENSMPUG00000009771	NOM1 (ENSMPUG00000009745) #19	LMBR1 (ENSMPUG00000009738) #20	RNF32 (ENSMPUG00000009708) #21	ENSMPUG00000009703	ENSMPUG00000009695	ENSMPUG00000009692 #22	RBM33 (ENSMPUG00000009616) #24	ENSMPUG00000009610	ENSMPUG00000009599 #25	EN2 (ENSMPUG00000009596) #26	ENSMPUG00000009588	ENSMPUG00000009578 #27	ENSMPUG00000009574	HTR5A (ENSMPUG00000009565) #28	PAXIP1 (ENSMPUG00000009429) #29	ENSMPUG00000009425	DPP6 (ENSMPUG00000009409) #30	ENSMPUG00000009404	ENSMPUG00000009396 #32	XRCC2 (ENSMPUG00000009388) #33	CCT8L2 (ENSMPUG00000019972) #34
American mink	MODERN SPECIES	66		VIPR2 (ENSNVIG00000022756) #8	DYNC2I1 (ENSNVIG00000022760) #9	ESYT2 (ENSNVIG00000022782) #10	NCAPG2 (ENSNVIG00000022842) #11	ENSNVIG00000022858	ENSNVIG00000022860	ENSNVIG00000022863	DNAJB6 (ENSNVIG00000022866) #14	UBE3C (ENSNVIG00000022869) #16	MNX1 (ENSNVIG00000022880) #17	NOM1 (ENSNVIG00000022884) #19	LMBR1 (ENSNVIG00000022891) #20	ENSNVIG00000022906	G5E940 (ENSNVIG00000000072) #21	ENSNVIG00000000208 #22	ENSNVIG00000000213 #24	ENSNVIG00000000244 #24	ENSNVIG00000000304 #25	EN2 (ENSNVIG00000000323) #26	INSIG1 (ENSNVIG00000000333) #27	HTR5A (ENSNVIG00000000414) #28	PAXIP1 (ENSNVIG00000000420) #29	DPP6 (ENSNVIG00000000483) #30	ENSNVIG00000000702	ENSNVIG00000000712 #32	XRCC2 (ENSNVIG00000000730) #33	CCT8L2 (ENSNVIG00000000744) #34	KMT2C (ENSNVIG00000000752)	GALNT11 (ENSNVIG00000000845) #36	ENSNVIG00000000867
Felidae	ANCESTRAL SPECIES	13					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Panthera	ANCESTRAL SPECIES	46					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Panthera_a	ANCESTRAL SPECIES	51					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
lion	MODERN SPECIES	2					VIPR2 (ENSPLOG00000000625) #8	DYNC2I1 (ENSPLOG00000000569) #9	ESYT2 (ENSPLOG00000000317) #10	NCAPG2 (ENSPLOG00000000135) #11	ENSPLOG00000000097	DNAJB6 (ENSPLOG00000003980) #14	UBE3C (ENSPLOG00000003946) #16	MNX1 (ENSPLOG00000003933) #17	NOM1 (ENSPLOG00000003918) #19	LMBR1 (ENSPLOG00000003872) #20	RNF32 (ENSPLOG00000003846) #21	SHH (ENSPLOG00000003828) #22	RBM33 (ENSPLOG00000003805) #24	ENSPLOG00000003778 #25	EN2 (ENSPLOG00000003765) #26	INSIG1 (ENSPLOG00000003752) #27	HTR5A (ENSPLOG00000003741) #28	PAXIP1 (ENSPLOG00000003689) #29	ENSPLOG00000003664	DPP6 (ENSPLOG00000003504) #30	ENSPLOG00000003411	ENSPLOG00000003354 #32	XRCC2 (ENSPLOG00000003315) #33	CCT8L2 (ENSPLOG00000003307) #34	KMT2C (ENSPLOG00000003238)	GALNT11 (ENSPLOG00000003190) #36	ENSPLOG00000003179
leopard	MODERN SPECIES	100					VIPR2 (ENSPPRG00000008355) #8	DYNC2I1 (ENSPPRG00000009013) #9	ESYT2 (ENSPPRG00000010108) #10	NCAPG2 (ENSPPRG00000012938) #11	ENSPPRG00000013187	DNAJB6 (ENSPPRG00000014279) #14	UBE3C (ENSPPRG00000018222) #16	ENSPPRG00000018523	ENSPPRG00000019502	LMBR1 (ENSPPRG00000000213) #20	RNF32 (ENSPPRG00000000886) #21	SHH (ENSPPRG00000001063) #22	ENSPPRG00000001410 #24	ENSPPRG00000001556	ENSPPRG00000001926 #24	ENSPPRG00000002064 #25	EN2 (ENSPPRG00000002234) #26	INSIG1 (ENSPPRG00000002510) #27	HTR5A (ENSPPRG00000002723) #28	PAXIP1 (ENSPPRG00000003450) #29	DPP6 (ENSPPRG00000006688) #30	ENSPPRG00000007943 #32	XRCC2 (ENSPPRG00000008124) #33	CCT8L2 (ENSPPRG00000016812) #34	KMT2C (ENSPPRG00000010608)	GALNT11 (ENSPPRG00000011292) #36	GALNTL5 (ENSPPRG00000012696) #37
Cat	MODERN SPECIES	1	ENSFCAG00000047682	ENSFCAG00000051169	VIPR2 (ENSFCAG00000009039) #8	DYNC2I1 (ENSFCAG00000009038) #9	ESYT2 (ENSFCAG00000009037) #10	NCAPG2 (ENSFCAG00000009036) #11	PTPRN2 (ENSFCAG00000007989) #13	DNAJB6 (ENSFCAG00000015654) #14	UBE3C (ENSFCAG00000013019) #16	MNX1 (ENSFCAG00000044486) #17	ENSFCAG00000047111	NOM1 (ENSFCAG00000006467) #19	LMBR1 (ENSFCAG00000033659) #20	RNF32 (ENSFCAG00000008206) #21	ENSFCAG00000048424	SHH (ENSFCAG00000041187) #22	RBM33 (ENSFCAG00000006602) #24	ENSFCAG00000044976 #25	EN2 (ENSFCAG00000044734) #26	INSIG1 (ENSFCAG00000045144) #27	HTR5A (ENSFCAG00000043931) #28	PAXIP1 (ENSFCAG00000008375) #29	ENSFCAG00000049554	DPP6 (ENSFCAG00000008374) #30	ENSFCAG00000005546 #32	XRCC2 (ENSFCAG00000006857) #33	CCT8L2 (ENSFCAG00000037662) #34	KMT2C (ENSFCAG00000008632)	GALNT11 (ENSFCAG00000008630) #36	GALNTL5 (ENSFCAG00000004856) #37	ENSFCAG00000049853
Laurasiatheria_c	ANCESTRAL SPECIES	13					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Equus	ANCESTRAL SPECIES	49					ENSGT00940000158089 #8	ENSGT00390000013743.l #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Donkey	MODERN SPECIES	11	ENSEASG00005009739	ENSEASG00005028671	ENSEASG00005001144 #8	ENSEASG00005001212 #9	ENSEASG00005001218 #9	ESYT2 (ENSEASG00005001225) #10	NCAPG2 (ENSEASG00005001278) #11	PTPRN2 (ENSEASG00005001394) #13	ENSEASG00005001458 #14	ENSEASG00005001467 #16	ENSEASG00005031811 #16	MNX1 (ENSEASG00005001480) #17	NOM1 (ENSEASG00005001489) #19	LMBR1 (ENSEASG00005001525) #20	RNF32 (ENSEASG00005001531) #21	SHH (ENSEASG00005034632) #22	RBM33 (ENSEASG00005001578) #24	ENSEASG00005033123 #25	EN2 (ENSEASG00005001656) #26	ENSEASG00005025381 #27	HTR5A (ENSEASG00005001664) #28	PAXIP1 (ENSEASG00005001671) #29	DPP6 (ENSEASG00005001682) #30	ENSEASG00005024911	ENSEASG00005001705 #32	XRCC2 (ENSEASG00005001714) #33	ENSEASG00005001720 #34	ENSEASG00005028409 #35	KMT2C (ENSEASG00005001765)	GALNT11 (ENSEASG00005001958) #36	GALNTL5 (ENSEASG00005001973) #37
Horse	MODERN SPECIES	25				VIPR2 (ENSECAG00000007939) #8	DYNC2I1 (ENSECAG00000026867) #9	ESYT2 (ENSECAG00000007800) #10	NCAPG2 (ENSECAG00000006686) #11	PTPRN2 (ENSECAG00000012762) #13	DNAJB6 (ENSECAG00000009005) #14	UBE3C (ENSECAG00000008395) #16	MNX1 (ENSECAG00000030814) #17	NOM1 (ENSECAG00000007596) #19	ENSECAG00000048794	LMBR1 (ENSECAG00000024396) #20	RNF32 (ENSECAG00000023936) #21	SHH (ENSECAG00000023075) #22	RBM33 (ENSECAG00000022285) #24	ENSECAG00000022036 #25	EN2 (ENSECAG00000021744) #26	INSIG1 (ENSECAG00000020022) #27	HTR5A (ENSECAG00000019251) #28	PAXIP1 (ENSECAG00000018110) #29	ENSECAG00000060031	DPP6 (ENSECAG00000014484) #30	ENSECAG00000010097 #32	XRCC2 (ENSECAG00000010069) #33	KMT2C (ENSECAG00000022544)	GALNT11 (ENSECAG00000020636) #36	GALNTL5 (ENSECAG00000018932) #37	PRKAG2 (ENSECAG00000012659)	ENSECAG00000008243
Chiroptera	ANCESTRAL SPECIES	53					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Megabat	MODERN SPECIES	2783																SHH (ENSPVAG00000000225) #22	RBM33 (ENSPVAG00000000221) #24
Microchiroptera	ANCESTRAL SPECIES	23							ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Greater horseshoe bat	MODERN SPECIES	18				VIPR2 (ENSRFEG00010015043) #8	ENSRFEG00010015126 #9	ENSRFEG00010015164 #9	ESYT2 (ENSRFEG00010015203) #10	NCAPG2 (ENSRFEG00010015359) #11	PTPRN2 (ENSRFEG00010015454) #13	DNAJB6 (ENSRFEG00010015536) #14	UBE3C (ENSRFEG00010015678) #16	MNX1 (ENSRFEG00010015910) #17	NOM1 (ENSRFEG00010015988) #19	LMBR1 (ENSRFEG00010016162) #20	RNF32 (ENSRFEG00010016347) #21	SHH (ENSRFEG00010016418) #22	ENSRFEG00010016456 #24	ENSRFEG00010016477 #24	ENSRFEG00010016506 #25	ENSRFEG00010016600	EN2 (ENSRFEG00010016660) #26	INSIG1 (ENSRFEG00010016730) #27	HTR5A (ENSRFEG00010016776) #28	PAXIP1 (ENSRFEG00010016821) #29	DPP6 (ENSRFEG00010016867) #30	ENSRFEG00010017713 #32	XRCC2 (ENSRFEG00010017820) #33	CCT8L2 (ENSRFEG00010017848) #34	KMT2C (ENSRFEG00010017912)	GALNT11 (ENSRFEG00010017974) #36	GALNTL5 (ENSRFEG00010018045) #37
Microbat	MODERN SPECIES	1378																ENSMLUG00000025004 #22	ENSMLUG00000001780 #24	EN2 (ENSMLUG00000004165) #26	INSIG1 (ENSMLUG00000016823) #27	HTR5A (ENSMLUG00000014427) #28	ENSMLUG00000022696 #29	ENSMLUG00000030603 #30
Artiodactyla	ANCESTRAL SPECIES	11			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Suina	ANCESTRAL SPECIES	19					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT01100000263477.B.d.a.c	ENSGT00950000183019.f.a	ENSGT00940000159945
Pig	MODERN SPECIES	9		ENSSSCG00000041670	ENSSSCG00000043920	VIPR2 (ENSSSCG00000016403) #8	DYNC2I1 (ENSSSCG00000038486) #9	ESYT2 (ENSSSCG00000016406) #10	NCAPG2 (ENSSSCG00000028169) #11	PTPRN2 (ENSSSCG00000026661) #13	DNAJB6 (ENSSSCG00000033272) #14	UBE3C (ENSSSCG00000016409) #16	ENSSSCG00000044842	MNX1 (ENSSSCG00000016410) #17	NOM1 (ENSSSCG00000016411) #19	LMBR1 (ENSSSCG00000016412) #20	ENSSSCG00000016414 #21	SHH (ENSSSCG00000016416) #22	ENSSSCG00000057427 #24	ENSSSCG00000061194 #24	ENSSSCG00000043069 #25	EN2 (ENSSSCG00000035324) #26	INSIG1 (ENSSSCG00000016420) #27	PAXIP1 (ENSSSCG00000025221) #29	DPP6 (ENSSSCG00000016423) #30	ENSSSCG00000040865	ENSSSCG00000016426 #32	XRCC2 (ENSSSCG00000032315) #33	ENSSSCG00000055167	CCT8L2 (ENSSSCG00000016428) #34	KMT2C (ENSSSCG00000020663)	GALNT11 (ENSSSCG00000016430) #36	GALNTL5 (ENSSSCG00000016431) #37
Chacoan peccary	MODERN SPECIES	897										DNAJB6 (ENSCWAG00000005928) #14	UBE3C (ENSCWAG00000005871) #16	MNX1 (ENSCWAG00000005836) #17	NOM1 (ENSCWAG00000005805) #19	LMBR1 (ENSCWAG00000005598) #20	RNF32 (ENSCWAG00000005489) #21	SHH (ENSCWAG00000005469) #22	ENSCWAG00000005441 #24	ENSCWAG00000005372 #24	ENSCWAG00000005316 #25	EN2 (ENSCWAG00000005293) #26	INSIG1 (ENSCWAG00000005266) #27	PAXIP1 (ENSCWAG00000005144) #29	DPP6 (ENSCWAG00000004337) #30	ENSCWAG00000004209 #32	XRCC2 (ENSCWAG00000004181) #33	CCT8L2 (ENSCWAG00000004165) #34
Artiodactyla_a	ANCESTRAL SPECIES	11			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Artiodactyla_b	ANCESTRAL SPECIES	11			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Cetacea	ANCESTRAL SPECIES	13				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000155065.lb.b	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Odontoceti	ANCESTRAL SPECIES	12				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000155065.lb.b	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Odontoceti_a	ANCESTRAL SPECIES	32				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000155065.lb.b	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.g #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156.c #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Odontoceti_b	ANCESTRAL SPECIES	13				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000155065.lb.b	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.g #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00950000182891.a.a.b.a.b.a.h.a	ENSGT00940000158227 #36	ENSGT00940000162156.c #37	ENSGT00950000183019.e
Monodontidae	ANCESTRAL SPECIES	12				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000155065.lb.b	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.g #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00390000001347.v.n.a	ENSGT00940000155281	ENSGT00950000182891.a.a.b.a.b.a.h.a	ENSGT00940000158227 #36	ENSGT00940000162156.c #37
Beluga whale	MODERN SPECIES	72				VIPR2 (ENSDLEG00000014065) #8	ENSDLEG00000014097 #9	ESYT2 (ENSDLEG00000014159) #10	NCAPG2 (ENSDLEG00000014297) #11	PTPRN2 (ENSDLEG00000014373) #13	DNAJB6 (ENSDLEG00000014560) #14	UBE3C (ENSDLEG00000014653) #16	MNX1 (ENSDLEG00000014696) #17	NOM1 (ENSDLEG00000014714) #19	LMBR1 (ENSDLEG00000014735) #20	RNF32 (ENSDLEG00000014766) #21	ENSDLEG00000014824	SHH (ENSDLEG00000014841) #22	ENSDLEG00000014850 #24	ENSDLEG00000014861 #24	CNPY1 (ENSDLEG00000014918) #25	EN2 (ENSDLEG00000014927) #26	ENSDLEG00000014937 #27	HTR5A (ENSDLEG00000014954) #28	PAXIP1 (ENSDLEG00000014965) #29	DPP6 (ENSDLEG00000015018) #30	VPS26A (ENSDLEG00000015854)	ACTR3B (ENSDLEG00000015872) #32	XRCC2 (ENSDLEG00000015930) #33	ENSDLEG00000015939	KMT2C (ENSDLEG00000015997)	ENSDLEG00000016412	GALNT11 (ENSDLEG00000016423) #36
Vaquita	MODERN SPECIES	20				VIPR2 (ENSPSNG00000009695) #8	DYNC2I1 (ENSPSNG00000009771) #9	ESYT2 (ENSPSNG00000009925) #10	NCAPG2 (ENSPSNG00000010189) #11	ENSPSNG00000010301	DNAJB6 (ENSPSNG00000010380) #14	UBE3C (ENSPSNG00000010638) #16	MNX1 (ENSPSNG00000010812) #17	NOM1 (ENSPSNG00000010865) #19	LMBR1 (ENSPSNG00000010950) #20	RNF32 (ENSPSNG00000011036) #21	ENSPSNG00000011099	SHH (ENSPSNG00000011156) #22	RBM33 (ENSPSNG00000011237) #24	ENSPSNG00000011324 #25	EN2 (ENSPSNG00000011442) #26	INSIG1 (ENSPSNG00000011487) #27	HTR5A (ENSPSNG00000011521) #28	PAXIP1 (ENSPSNG00000011584) #29	DPP6 (ENSPSNG00000004321) #30	ENSPSNG00000004645 #32	XRCC2 (ENSPSNG00000004702) #33	ENSPSNG00000004796	ENSPSNG00000004819	GALNT11 (ENSPSNG00000004845) #36	GALNTL5 (ENSPSNG00000004886) #37	PRKAG2 (ENSPSNG00000004954)	RHEB (ENSPSNG00000005066)
Dolphin	MODERN SPECIES	1553															ENSTTRG00000013726	SHH (ENSTTRG00000013721) #22	RBM33 (ENSTTRG00000013715) #24	ENSTTRG00000013710 #25	EN2 (ENSTTRG00000013702) #26
Sperm whale	MODERN SPECIES	16			VIPR2 (ENSPCTG00005020664) #8	ENSPCTG00005005469	DYNC2I1 (ENSPCTG00005005483) #9	ESYT2 (ENSPCTG00005005520) #10	NCAPG2 (ENSPCTG00005005729) #11	PTPRN2 (ENSPCTG00005005949) #13	DNAJB6 (ENSPCTG00005007022) #14	UBE3C (ENSPCTG00005007142) #16	MNX1 (ENSPCTG00005007274) #17	NOM1 (ENSPCTG00005007325) #19	LMBR1 (ENSPCTG00005007391) #20	RNF32 (ENSPCTG00005007584) #21	ENSPCTG00005007606	SHH (ENSPCTG00005007615) #22	RBM33 (ENSPCTG00005007636) #24	ENSPCTG00005007688 #25	EN2 (ENSPCTG00005007717) #26	INSIG1 (ENSPCTG00005007737) #27	HTR5A (ENSPCTG00005007776) #28	PAXIP1 (ENSPCTG00005007795) #29	DPP6 (ENSPCTG00005007889) #30	ENSPCTG00005008391	ACTR3B (ENSPCTG00005008420) #32	XRCC2 (ENSPCTG00005008485) #33	KMT2C (ENSPCTG00005008586)	ENSPCTG00005009773	GALNT11 (ENSPCTG00005009799) #36	GALNTL5 (ENSPCTG00005009865) #37	PRKAG2 (ENSPCTG00005009961)
Blue whale	MODERN SPECIES	20				VIPR2 (ENSBMSG00010009918) #8	DYNC2I1 (ENSBMSG00010009991) #9	ESYT2 (ENSBMSG00010010175) #10	NCAPG2 (ENSBMSG00010010412) #11	PTPRN2 (ENSBMSG00010010494) #13	DNAJB6 (ENSBMSG00010010588) #14	UBE3C (ENSBMSG00010010629) #16	MNX1 (ENSBMSG00010010704) #17	NOM1 (ENSBMSG00010010740) #19	LMBR1 (ENSBMSG00010010821) #20	RNF32 (ENSBMSG00010010901) #21	ENSBMSG00010010938	SHH (ENSBMSG00010010970) #22	RBM33 (ENSBMSG00010011000) #24	ENSBMSG00010011052 #25	EN2 (ENSBMSG00010011067) #26	INSIG1 (ENSBMSG00010011082) #27	HTR5A (ENSBMSG00010011100) #28	PAXIP1 (ENSBMSG00010011138) #29	DPP6 (ENSBMSG00010011416) #30	ENSBMSG00010011738	ENSBMSG00010011763	ENSBMSG00010011791 #32	ENSBMSG00010011834	XRCC2 (ENSBMSG00010011849) #33	KMT2C (ENSBMSG00010011885)	ENSBMSG00010011949	GALNT11 (ENSBMSG00010011957) #36
Pecora	ANCESTRAL SPECIES	11			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT01010000223738	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Yarkand deer	MODERN SPECIES	876																ENSCHYG00000019971 #22
Percora_a	ANCESTRAL SPECIES	11			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT01010000223738	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Siberian musk deer	MODERN SPECIES	302			VIPR2 (ENSMMSG00000005608) #8	ENSMMSG00000005668 #9	ENSMMSG00000005740	ESYT2 (ENSMMSG00000005840) #10	NCAPG2 (ENSMMSG00000006253) #11	ENSMMSG00000006288	ENSMMSG00000006376 #13	DNAJB6 (ENSMMSG00000006445) #14	UBE3C (ENSMMSG00000006524) #16	MNX1 (ENSMMSG00000006716) #17	NOM1 (ENSMMSG00000006749) #19	LMBR1 (ENSMMSG00000006852) #20	RNF32 (ENSMMSG00000007083) #21	SHH (ENSMMSG00000007351) #22	RBM33 (ENSMMSG00000007384) #24	ENSMMSG00000007453	ENSMMSG00000007461 #25	EN2 (ENSMMSG00000007514) #26	INSIG1 (ENSMMSG00000007539) #27	HTR5A (ENSMMSG00000007561) #28	PAXIP1 (ENSMMSG00000007585) #29	DPP6 (ENSMMSG00000007730) #30	ENSMMSG00000008408 #32	XRCC2 (ENSMMSG00000008501) #33	CCT8L2 (ENSMMSG00000008518) #34	KMT2C (ENSMMSG00000008600)	GALNT11 (ENSMMSG00000009289) #36	GALNTL5 (ENSMMSG00000009329) #37	PRKAG2 (ENSMMSG00000009412)
Bovidae	ANCESTRAL SPECIES	12	ENSGT00940000162665.d	ENSGT00940000162665.c	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT01010000223738	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Caprinae	ANCESTRAL SPECIES	47			ENSGT00940000162665.d	ENSGT00940000162665.c	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Rambouillet Sheep	MODERN SPECIES	20							ENSOARG00020009761	VIPR2 (ENSOARG00020009244) #8	DYNC2I1 (ENSOARG00020007627) #9	ESYT2 (ENSOARG00020007318) #10	NCAPG2 (ENSOARG00020006925) #11	UBE3C (ENSOARG00020022536) #16	MNX1 (ENSOARG00020022488) #17	LMBR1 (ENSOARG00020022336) #20	RNF32 (ENSOARG00020022205) #21	SHH (ENSOARG00020022160) #22	ENSOARG00020022139 #24	ENSOARG00020022000 #24	ENSOARG00020021953 #25	EN2 (ENSOARG00020021934) #26	INSIG1 (ENSOARG00020021923) #27	HTR5A (ENSOARG00020021673) #28	PAXIP1 (ENSOARG00020020495) #29	DPP6 (ENSOARG00020018767) #30	ENSOARG00020018455 #32	XRCC2 (ENSOARG00020018428) #33	KMT2C (ENSOARG00020017517)	GALNT11 (ENSOARG00020017410) #36	GALNTL5 (ENSOARG00020017347) #37	PRKAG2 (ENSOARG00020016773)	RHEB (ENSOARG00020016712)
Goat	MODERN SPECIES	23					VIPR2 (ENSCHIG00000024861) #8	ENSCHIG00000018296 #9	ESYT2 (ENSCHIG00000012719) #10	NCAPG2 (ENSCHIG00000003444) #11	PTPRN2 (ENSCHIG00000018892) #13	ENSCHIG00000018037 #14	UBE3C (ENSCHIG00000014768) #16	MNX1 (ENSCHIG00000014024) #17	NOM1 (ENSCHIG00000020102) #19	LMBR1 (ENSCHIG00000014826) #20	RNF32 (ENSCHIG00000019658) #21	SHH (ENSCHIG00000023555) #22	RBM33 (ENSCHIG00000012513) #24	ENSCHIG00000011221 #25	EN2 (ENSCHIG00000017008) #26	INSIG1 (ENSCHIG00000023323) #27	HTR5A (ENSCHIG00000011892) #28	PAXIP1 (ENSCHIG00000020313) #29	DPP6 (ENSCHIG00000006632) #30	ENSCHIG00000019499	ENSCHIG00000026843 #32	XRCC2 (ENSCHIG00000024225) #33	CCT8L2 (ENSCHIG00000010339) #34	KMT2C (ENSCHIG00000012628)	GALNT11 (ENSCHIG00000026778) #36	GALNTL5 (ENSCHIG00000019057) #37	PRKAG2 (ENSCHIG00000024028)
Bovinae	ANCESTRAL SPECIES	8	ENSGT00940000162665.d	ENSGT00940000162665.c.b	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00390000009113.a.a.k.b.c	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT01010000223738	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36
American bison	MODERN SPECIES	3356						ENSBBBG00000014103	VIPR2 (ENSBBBG00000003156) #8	ENSBBBG00000003146 #9	ENSBBBG00000003144	ESYT2 (ENSBBBG00000003140) #10	NCAPG2 (ENSBBBG00000014049) #11	DNAJB6 (ENSBBBG00000003081) #14	UBE3C (ENSBBBG00000003074) #16	LMBR1 (ENSBBBG00000003029) #20	RNF32 (ENSBBBG00000013873) #21	ENSBBBG00000013797 #22	ENSBBBG00000013784 #24	ENSBBBG00000013775 #24	ENSBBBG00000013763 #25	EN2 (ENSBBBG00000008741) #26	INSIG1 (ENSBBBG00000013745) #27	HTR5A (ENSBBBG00000013740) #28	DPP6 (ENSBBBG00000001526) #30	ZNF214 (ENSBBBG00000013663)	NLRP14 (ENSBBBG00000002850)	ENSBBBG00000002843	ENSBBBG00000013642	SYT9 (ENSBBBG00000013632)	OLFML1 (ENSBBBG00000013609)	PPFIBP2 (ENSBBBG00000013592)	CYB5R2 (ENSBBBG00000006942)
Bos	ANCESTRAL SPECIES	8		ENSGT00940000162665.d	ENSGT00940000162665.c.b.b	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000161119.e.b #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00390000009113.a.a.k.b.c	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT01010000223738	ENSGT00940000163221 #34	ENSGT00940000155281
Bos_b	ANCESTRAL SPECIES	7		ENSGT00940000162665.d	ENSGT00940000162665.c.b.b	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.b #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00390000009113.a.a.k.b.c	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT01010000223738	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36
Hybrid Bos Indicus	MODERN SPECIES	23			ENSBIXG00005018279	VIPR2 (ENSBIXG00005002957) #8	DYNC2I1 (ENSBIXG00005005593) #9	ESYT2 (ENSBIXG00005018118) #10	NCAPG2 (ENSBIXG00005018040) #11	ENSBIXG00005017942	ENSBIXG00005002902 #13	DNAJB6 (ENSBIXG00005016751) #14	UBE3C (ENSBIXG00005016672) #16	MNX1 (ENSBIXG00005016541) #17	NOM1 (ENSBIXG00005002662) #19	LMBR1 (ENSBIXG00005016491) #20	RNF32 (ENSBIXG00005016410) #21	SHH (ENSBIXG00005016323) #22	RBM33 (ENSBIXG00005006571) #24	ENSBIXG00005016227 #25	EN2 (ENSBIXG00005016206) #26	INSIG1 (ENSBIXG00005016175) #27	HTR5A (ENSBIXG00005016107) #28	ENSBIXG00005016093	PAXIP1 (ENSBIXG00005016085) #29	DPP6 (ENSBIXG00005016005) #30	ENSBIXG00005015650	ENSBIXG00005002349 #32	XRCC2 (ENSBIXG00005015470) #33	CCT8L2 (ENSBIXG00005007318) #34	KMT2C (ENSBIXG00005015371)	GALNT11 (ENSBIXG00005015098) #36	GALNTL5 (ENSBIXG00005015014) #37
Cow	MODERN SPECIES	23				ENSBTAG00000030838	VIPR2 (ENSBTAG00000037649) #8	DYNC2I1 (ENSBTAG00000024157) #9	ESYT2 (ENSBTAG00000005483) #10	NCAPG2 (ENSBTAG00000016131) #11	PTPRN2 (ENSBTAG00000004958) #13	DNAJB6 (ENSBTAG00000000771) #14	UBE3C (ENSBTAG00000008025) #16	MNX1 (ENSBTAG00000030876) #17	NOM1 (ENSBTAG00000016435) #19	LMBR1 (ENSBTAG00000030817) #20	RNF32 (ENSBTAG00000020335) #21	SHH (ENSBTAG00000024552) #22	RBM33 (ENSBTAG00000010243) #24	CNPY1 (ENSBTAG00000000397) #25	EN2 (ENSBTAG00000018917) #26	INSIG1 (ENSBTAG00000001592) #27	HTR5A (ENSBTAG00000002891) #28	PAXIP1 (ENSBTAG00000017505) #29	DPP6 (ENSBTAG00000021941) #30	ENSBTAG00000009002	ACTR3B (ENSBTAG00000008032) #32	XRCC2 (ENSBTAG00000030897) #33	ENSBTAG00000019597	CCT8L2 (ENSBTAG00000014871) #34	KMT2C (ENSBTAG00000024199)	GALNT11 (ENSBTAG00000021260) #36	GALNTL5 (ENSBTAG00000045535) #37
Bos_a	ANCESTRAL SPECIES	37				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119.e.a #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00390000009113.a.a.k.b.c	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Wild yak	MODERN SPECIES	1357																SHH (ENSBMUG00000016975) #22	ENSBMUG00000016978 #24	ENSBMUG00000017044 #24	ENSBMUG00000017062 #25
Domestic yak	MODERN SPECIES	23	ENSBGRG00000016026	ENSBGRG00000016009	ENSBGRG00000015987	ENSBGRG00000015928	VIPR2 (ENSBGRG00000015840) #8	DYNC2I1 (ENSBGRG00000015386) #9	ESYT2 (ENSBGRG00000014549) #10	NCAPG2 (ENSBGRG00000014257) #11	ENSBGRG00000014087	DNAJB6 (ENSBGRG00000013883) #14	UBE3C (ENSBGRG00000013115) #16	MNX1 (ENSBGRG00000012974) #17	NOM1 (ENSBGRG00000012801) #19	LMBR1 (ENSBGRG00000012112) #20	RNF32 (ENSBGRG00000011799) #21	SHH (ENSBGRG00000011761) #22	RBM33 (ENSBGRG00000011152) #24	ENSBGRG00000011077	ENSBGRG00000010955 #25	EN2 (ENSBGRG00000010916) #26	INSIG1 (ENSBGRG00000010766) #27	ENSBGRG00000010638 #28	PAXIP1 (ENSBGRG00000010084) #29	ENSBGRG00000010048	DPP6 (ENSBGRG00000008941) #30	ENSBGRG00000008866	ENSBGRG00000008613 #32	XRCC2 (ENSBGRG00000008528) #33	CCT8L2 (ENSBGRG00000008514) #34	ENSBGRG00000008491	KMT2C (ENSBGRG00000008413)
Camelidae	ANCESTRAL SPECIES	75						ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945	ENSGT00940000159301
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	33						VIPR2 (ENSCDRG00005018115) #8	DYNC2I1 (ENSCDRG00005018059) #9	ESYT2 (ENSCDRG00005015705) #10	NCAPG2 (ENSCDRG00005015539) #11	DNAJB6 (ENSCDRG00005015370) #14	UBE3C (ENSCDRG00005015208) #16	MNX1 (ENSCDRG00005015149) #17	NOM1 (ENSCDRG00005014916) #19	LMBR1 (ENSCDRG00005014720) #20	RNF32 (ENSCDRG00005014641) #21	SHH (ENSCDRG00005014595) #22	ENSCDRG00005014567 #22	ENSCDRG00005014528 #24	ENSCDRG00005014413 #24	ENSCDRG00005014336 #25	EN2 (ENSCDRG00005014291) #26	INSIG1 (ENSCDRG00005014184) #27	ENSCDRG00005014072	HTR5A (ENSCDRG00005014031) #28	PAXIP1 (ENSCDRG00005013615) #29	DPP6 (ENSCDRG00005013198) #30	ENSCDRG00005013078 #32	XRCC2 (ENSCDRG00005013049) #33	ENSCDRG00005013019	ENSCDRG00005012962	KMT2C (ENSCDRG00005012745)
Arabian camel	MODERN SPECIES	33					VIPR2 (ENSCDRG00005018115) #8	DYNC2I1 (ENSCDRG00005018059) #9	ESYT2 (ENSCDRG00005015705) #10	NCAPG2 (ENSCDRG00005015539) #11	DNAJB6 (ENSCDRG00005015370) #14	UBE3C (ENSCDRG00005015208) #16	MNX1 (ENSCDRG00005015149) #17	NOM1 (ENSCDRG00005014916) #19	LMBR1 (ENSCDRG00005014720) #20	RNF32 (ENSCDRG00005014641) #21	SHH (ENSCDRG00005014595) #22	ENSCDRG00005014567 #22	ENSCDRG00005014528 #24	ENSCDRG00005014413 #24	ENSCDRG00005014336 #25	EN2 (ENSCDRG00005014291) #26	INSIG1 (ENSCDRG00005014184) #27	ENSCDRG00005014072	HTR5A (ENSCDRG00005014031) #28	PAXIP1 (ENSCDRG00005013615) #29	DPP6 (ENSCDRG00005013198) #30	ENSCDRG00005013078 #32	XRCC2 (ENSCDRG00005013049) #33	ENSCDRG00005013019	ENSCDRG00005012962	KMT2C (ENSCDRG00005012745)	GALNT11 (ENSCDRG00005012674) #36
Euarchontoglires	ANCESTRAL SPECIES	13			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36
Euarchontoglires_A	ANCESTRAL SPECIES	17			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Glires	ANCESTRAL SPECIES	18			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Lagomorpha	ANCESTRAL SPECIES	197						ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27
Rabbit	MODERN SPECIES	4	LHX4 (ENSOCUG00000005182)	ACBD6 (ENSOCUG00000005184)	XPR1 (ENSOCUG00000000566)	ENSOCUG00000034059	VIPR2 (ENSOCUG00000003473) #8	DYNC2I1 (ENSOCUG00000009901) #9	ESYT2 (ENSOCUG00000002976) #10	NCAPG2 (ENSOCUG00000015509) #11	ENSOCUG00000030923	ENSOCUG00000000064 #14	UBE3C (ENSOCUG00000012490) #16	NOM1 (ENSOCUG00000004071) #19	LMBR1 (ENSOCUG00000001247) #20	RNF32 (ENSOCUG00000022989) #21	RBM33 (ENSOCUG00000012142) #24	SHH (ENSOCUG00000016862) #22	ENSOCUG00000033825	ENSOCUG00000002457 #25	EN2 (ENSOCUG00000002453) #26	INSIG1 (ENSOCUG00000013795) #27	ENSOCUG00000023543	HTR5A (ENSOCUG00000001410) #28	KCNH2 (ENSOCUG00000027575)	NOS3 (ENSOCUG00000023757)	ATG9B (ENSOCUG00000008673)	ABCB8 (ENSOCUG00000008682)	ASIC3 (ENSOCUG00000027689)	CDK5 (ENSOCUG00000021398)	SLC4A2 (ENSOCUG00000038102)	FASTK (ENSOCUG00000023964)	TMUB1 (ENSOCUG00000001736)
Rodentia	ANCESTRAL SPECIES	12			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Rodentia_B	ANCESTRAL SPECIES	9									ENSGT00960000189764.a	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Myomorpha	ANCESTRAL SPECIES	8									ENSGT00960000189764.a	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e
Muroidea	ANCESTRAL SPECIES	8									ENSGT00960000189764.a	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01030000235027	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b	ENSGT00390000014833	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Cricetidae	ANCESTRAL SPECIES	3	ENSGT01030000235027	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b	ENSGT00390000014833	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166831	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b	ENSGT00390000014833	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a.i #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166831	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Golden Hamster	MODERN SPECIES	781										Ube3c (ENSMAUG00000014156) #16	Mnx1 (ENSMAUG00000016323) #17	Nom1 (ENSMAUG00000017988) #19	ENSMAUG00000014867	Lmbr1 (ENSMAUG00000015566) #20	Rnf32 (ENSMAUG00000000042) #21	Shh (ENSMAUG00000016493) #22	Rbm33 (ENSMAUG00000017332) #24	ENSMAUG00000000075 #25	En2 (ENSMAUG00000018311) #26	Insig1 (ENSMAUG00000000814) #27	Htr5a (ENSMAUG00000001772) #28	Paxip1 (ENSMAUG00000003325) #29	Dpp6 (ENSMAUG00000007340) #30	Actr3b (ENSMAUG00000009519) #32	ENSMAUG00000012568	ENSMAUG00000009446 #35	ENSMAUG00000012286	Galnt11 (ENSMAUG00000014251) #36
Chinese hamster chok1gshd	MODERN SPECIES	212	Nupl2 (ENSCGRG00001019625)	ENSCGRG00001002267	Hycc1 (ENSCGRG00001014837)	ENSCGRG00001000775	Tomm7 (ENSCGRG00001024471)	Il6 (ENSCGRG00001024135)	ENSCGRG00001022947 #14	ENSCGRG00001021591	Ube3c (ENSCGRG00001012001) #16	Mnx1 (ENSCGRG00001023539) #17	Nom1 (ENSCGRG00001020293) #19	ENSCGRG00001002440	Lmbr1 (ENSCGRG00001017749) #20	ENSCGRG00001013740	Rnf32 (ENSCGRG00001006621) #21	Shh (ENSCGRG00001016950) #22	Rbm33 (ENSCGRG00001021677) #24	Cnpy1 (ENSCGRG00001022362) #25	En2 (ENSCGRG00001019240) #26	Insig1 (ENSCGRG00001012058) #27	Htr5a (ENSCGRG00001010326) #28	Paxip1 (ENSCGRG00001019392) #29	Dpp6 (ENSCGRG00001021197) #30	ENSCGRG00001005137	Actr3b (ENSCGRG00001019328) #32	Xrcc2 (ENSCGRG00001014306) #33	Cct8l1 (ENSCGRG00001016412) #34	Kmt2c (ENSCGRG00001003349)	E130116L18Rik (ENSCGRG00001017528)	Galnt11 (ENSCGRG00001013302) #36	Galntl5 (ENSCGRG00001010298) #37
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b	ENSGT00390000014833	ENSGT00390000000878	ENSGT00960000189710	ENSGT00960000189764.a	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000166831	ENSGT00940000166821.a #35	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Prairie vole	MODERN SPECIES	101	Gimap6 (ENSMOCG00000018308)	ENSMOCG00000006854	Gimap1 (ENSMOCG00000007377)	ENSMOCG00000002213	ENSMOCG00000018608	ENSMOCG00000018590 #14	Ube3c (ENSMOCG00000018821) #16	ENSMOCG00000002622	Mnx1 (ENSMOCG00000020173) #17	Nom1 (ENSMOCG00000015962) #19	ENSMOCG00000010734	Lmbr1 (ENSMOCG00000008297) #20	Rnf32 (ENSMOCG00000014460) #21	ENSMOCG00000018001	ENSMOCG00000013020	Shh (ENSMOCG00000008843) #22	Rbm33 (ENSMOCG00000021895) #24	ENSMOCG00000010240 #25	ENSMOCG00000019441	En2 (ENSMOCG00000015841) #26	Insig1 (ENSMOCG00000020032) #27	Htr5a (ENSMOCG00000019605) #28	Paxip1 (ENSMOCG00000013649) #29	Dpp6 (ENSMOCG00000000556) #30	Actr3b (ENSMOCG00000004828) #32	ENSMOCG00000016671	ENSMOCG00000020782 #35	ENSMOCG00000001053	Galnt11 (ENSMOCG00000005276) #36	Galntl5 (ENSMOCG00000013714) #37	Prkag2 (ENSMOCG00000001286)
Northern American deer mouse	MODERN SPECIES	16	ENSPEMG00000020458	Gpnmb (ENSPEMG00000001851)	Nupl2 (ENSPEMG00000009593)	Klhl7 (ENSPEMG00000017307)	ENSPEMG00000015269	ENSPEMG00000025402	Il6 (ENSPEMG00000020620)	ENSPEMG00000028907	ENSPEMG00000021036 #14	Ube3c (ENSPEMG00000022332) #16	Mnx1 (ENSPEMG00000013095) #17	Nom1 (ENSPEMG00000024180) #19	Lmbr1 (ENSPEMG00000000837) #20	Rnf32 (ENSPEMG00000023063) #21	ENSPEMG00000028888	Shh (ENSPEMG00000027532) #22	Rbm33 (ENSPEMG00000017918) #24	ENSPEMG00000016430 #25	En2 (ENSPEMG00000027515) #26	Insig1 (ENSPEMG00000022295) #27	Htr5a (ENSPEMG00000030608) #28	Paxip1 (ENSPEMG00000024228) #29	Dpp6 (ENSPEMG00000025609) #30	Actr3b (ENSPEMG00000018361) #32	Xrcc2 (ENSPEMG00000019759) #33	Cct8l1 (ENSPEMG00000026242) #34	Kmt2c (ENSPEMG00000030774)	Galnt11 (ENSPEMG00000019403) #36	Galntl5 (ENSPEMG00000013005) #37	Prkag2 (ENSPEMG00000023670)	Rheb (ENSPEMG00000023193)
Murinae	ANCESTRAL SPECIES	31									ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Mus	ANCESTRAL SPECIES	24							ENSGT00390000014786	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00860000136054	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00800000125329	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Mus_A	ANCESTRAL SPECIES	6	ENSGT00950000183117.b	ENSGT00940000161541	ENSGT01030000234626.A.b	ENSGT00940000154677	ENSGT00530000063834.e.b	ENSGT00700000106164	ENSGT00390000014786	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00860000136054	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00800000125329	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Ryukyu mouse	MODERN SPECIES	14	MGP_CAROLIEiJ_G0027055	Adgrf3 (MGP_CAROLIEiJ_G0027054)	Hadhb (MGP_CAROLIEiJ_G0027053)	Hadha (MGP_CAROLIEiJ_G0027052)	Garem2 (MGP_CAROLIEiJ_G0027051)	MGP_CAROLIEiJ_G0027050	MGP_CAROLIEiJ_G0027049	Il6 (MGP_CAROLIEiJ_G0027048)	MGP_CAROLIEiJ_G0027047 #14	MGP_CAROLIEiJ_G0027046	Ube3c (MGP_CAROLIEiJ_G0027045) #16	Mnx1 (MGP_CAROLIEiJ_G0027044) #17	MGP_CAROLIEiJ_G0027043 #19	Lmbr1 (MGP_CAROLIEiJ_G0027042) #20	Rnf32 (MGP_CAROLIEiJ_G0027041) #21	Shh (MGP_CAROLIEiJ_G0027040) #22	Rbm33 (MGP_CAROLIEiJ_G0027039) #24	Cnpy1 (MGP_CAROLIEiJ_G0027038) #25	En2 (MGP_CAROLIEiJ_G0027037) #26	Insig1 (MGP_CAROLIEiJ_G0027036) #27	Htr5a (MGP_CAROLIEiJ_G0027035) #28	Paxip1 (MGP_CAROLIEiJ_G0027034) #29	Dpp6 (MGP_CAROLIEiJ_G0027033) #30	Xrcc2 (MGP_CAROLIEiJ_G0027031) #33	Cct8l1 (MGP_CAROLIEiJ_G0027030) #34	Kmt2c (MGP_CAROLIEiJ_G0027029)	E130116L18Rik (MGP_CAROLIEiJ_G0027028)	Galnt11 (MGP_CAROLIEiJ_G0027027) #36	Galntl5 (MGP_CAROLIEiJ_G0027026) #37	Prkag2 (MGP_CAROLIEiJ_G0027025)	Rheb (MGP_CAROLIEiJ_G0027024)
Mus_B	ANCESTRAL SPECIES	4	ENSGT00950000183117.b	ENSGT00940000161541	ENSGT01030000234626.A.b	ENSGT00940000154677	ENSGT00530000063834.e.b	ENSGT00700000106164	ENSGT00390000014786	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00860000136054	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00800000125329	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Mouse	MODERN SPECIES	14	Otof (ENSMUSG00000062372)	Drc1 (ENSMUSG00000073102)	Selenoi (ENSMUSG00000075703)	Adgrf3 (ENSMUSG00000067642)	Hadhb (ENSMUSG00000059447)	Hadha (ENSMUSG00000025745)	Garem2 (ENSMUSG00000044576)	Tyms (ENSMUSG00000025747)	Il6 (ENSMUSG00000025746)	Dnajb6 (ENSMUSG00000029131) #14	Ube3c (ENSMUSG00000039000) #16	Mnx1 (ENSMUSG00000001566) #17	Nom1 (ENSMUSG00000001569) #19	Lmbr1 (ENSMUSG00000010721) #20	Rnf32 (ENSMUSG00000029130) #21	Shh (ENSMUSG00000002633) #22	Rbm33 (ENSMUSG00000048271) #24	Cnpy1 (ENSMUSG00000044681) #25	En2 (ENSMUSG00000039095) #26	Insig1 (ENSMUSG00000045294) #27	Htr5a (ENSMUSG00000039106) #28	Paxip1 (ENSMUSG00000002221) #29	Speer4b (ENSMUSG00000048703)	Dpp6 (ENSMUSG00000061576) #30	Gm7361 (ENSMUSG00000059645)	Gm10220 (ENSMUSG00000067698)	5031410I06Rik (ENSMUSG00000051940)	Gm10471 (ENSMUSG00000073116)	Gm7347 (ENSMUSG00000073117)	Speer4a (ENSMUSG00000073119)	Gm5862 (ENSMUSG00000067700)
Mus_C	ANCESTRAL SPECIES	4	ENSGT00950000183117.b	ENSGT00940000161541	ENSGT01030000234626.A.b	ENSGT00940000154677	ENSGT00530000063834.e.b	ENSGT00700000106164	ENSGT00390000014786	ENSGT00390000000878	ENSGT00940000154205.h #14	ENSGT00860000136054	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00800000125329	ENSGT00940000162156 #37	ENSGT00950000183019.f.a
Steppe mouse	MODERN SPECIES	15	Garem2 (ENSMSIG00000012700)	ENSMSIG00000012679	Tyms (ENSMSIG00000012655)	Il6 (ENSMSIG00000012630)	ENSMSIG00000012620	Rfk (ENSMSIG00000012617)	ENSMSIG00000012609	ENSMSIG00000012602	ENSMSIG00000012364 #14	Ube3c (ENSMSIG00000012285) #16	Mnx1 (ENSMSIG00000012250) #17	Nom1 (ENSMSIG00000012221) #19	Lmbr1 (ENSMSIG00000012080) #20	Rnf32 (ENSMSIG00000012044) #21	ENSMSIG00000012025	Shh (ENSMSIG00000012010) #22
spretus	MODERN SPECIES	14	Selenoi (MGP_SPRETEiJ_G0028051)	Adgrf3 (MGP_SPRETEiJ_G0028050)	Hadhb (MGP_SPRETEiJ_G0028049)	Hadha (MGP_SPRETEiJ_G0028048)	Garem2 (MGP_SPRETEiJ_G0028047)	MGP_SPRETEiJ_G0028046	MGP_SPRETEiJ_G0028045	Il6 (MGP_SPRETEiJ_G0028044)	MGP_SPRETEiJ_G0028043 #14	MGP_SPRETEiJ_G0028042	MGP_SPRETEiJ_G0028041 #16	Mnx1 (MGP_SPRETEiJ_G0028040) #17	MGP_SPRETEiJ_G0028039 #19	Lmbr1 (MGP_SPRETEiJ_G0028038) #20	MGP_SPRETEiJ_G0028037 #21	Shh (MGP_SPRETEiJ_G0028036) #22	Rbm33 (MGP_SPRETEiJ_G0028035) #24	MGP_SPRETEiJ_G0028034 #25	En2 (MGP_SPRETEiJ_G0028033) #26	Insig1 (MGP_SPRETEiJ_G0028032) #27	Htr5a (MGP_SPRETEiJ_G0028031) #28	Paxip1 (MGP_SPRETEiJ_G0028030) #29	Dpp6 (MGP_SPRETEiJ_G0028029) #30	Actr3b (MGP_SPRETEiJ_G0028028) #32	Xrcc2 (MGP_SPRETEiJ_G0028027) #33	Cct8l1 (MGP_SPRETEiJ_G0028026) #34	Kmt2c (MGP_SPRETEiJ_G0028025)	E130116L18Rik (MGP_SPRETEiJ_G0028024)	Galnt11 (MGP_SPRETEiJ_G0028023) #36	Galntl5 (MGP_SPRETEiJ_G0028022) #37	Prkag2 (MGP_SPRETEiJ_G0028021)
Shrew mouse	MODERN SPECIES	11	Gngt1 (MGP_PahariEiJ_G0021828)	Tfpi2 (MGP_PahariEiJ_G0021827)	Calcr (MGP_PahariEiJ_G0021826)	Vps50 (MGP_PahariEiJ_G0021825)	Hepacam2 (MGP_PahariEiJ_G0021824)	Samd9l (MGP_PahariEiJ_G0021823)	MGP_PahariEiJ_G0021822	Il6 (MGP_PahariEiJ_G0021821)	MGP_PahariEiJ_G0021820 #14	MGP_PahariEiJ_G0021819	Ube3c (MGP_PahariEiJ_G0021818) #16	Mnx1 (MGP_PahariEiJ_G0021817) #17	MGP_PahariEiJ_G0021816 ##19	Lmbr1 (MGP_PahariEiJ_G0021815) #20	Rnf32 (MGP_PahariEiJ_G0021814) #21	Shh (MGP_PahariEiJ_G0021813) #22	Rbm33 (MGP_PahariEiJ_G0021812) #24	MGP_PahariEiJ_G0021811 #25	En2 (MGP_PahariEiJ_G0021810) #26	Insig1 (MGP_PahariEiJ_G0021809) #27	Htr5a (MGP_PahariEiJ_G0021808) #28	Paxip1 (MGP_PahariEiJ_G0021807) #29	Dpp6 (MGP_PahariEiJ_G0021806) #30	MGP_PahariEiJ_G0021805 #32	MGP_PahariEiJ_G0021804	Cct8l1 (MGP_PahariEiJ_G0021803) #34	Kmt2c (MGP_PahariEiJ_G0021802)	MGP_PahariEiJ_G0021801	Galnt11 (MGP_PahariEiJ_G0021800) #36	Galntl5 (MGP_PahariEiJ_G0021799) #37	Prkag2 (MGP_PahariEiJ_G0021798)
Rat	MODERN SPECIES	14							ENSRNOG00000067309	Il6 (ENSRNOG00000010278)	Dnajb6 (ENSRNOG00000010353) #14	Ube3c (ENSRNOG00000010702) #16	LOC681193 (ENSRNOG00000042507)	Mnx1 (ENSRNOG00000046959) #17	Nom1 (ENSRNOG00000048969) #19	Lmbr1 (ENSRNOG00000059589) #20	Rnf32 (ENSRNOG00000005691) #21	Shh (ENSRNOG00000006120) #22	Rbm33 (ENSRNOG00000006718) #24	Cnpy1 (ENSRNOG00000028311) #25	En2 (ENSRNOG00000006846) #26	Insig1 (ENSRNOG00000006859) #27	Htr5a (ENSRNOG00000007066) #28	Paxip1 (ENSRNOG00000007131) #29	Dpp6 (ENSRNOG00000030547) #30	Actr3b (ENSRNOG00000031855) #32	Xrcc2 (ENSRNOG00000007493) #33	AABR07059161.1 (ENSRNOG00000051942)	Rpl10a-ps9 (ENSRNOG00000047067)	Cct8l2 (ENSRNOG00000047114) #34	Kmt2c (ENSRNOG00000061080)	Galnt11 (ENSRNOG00000008117) #36	Galntl5 (ENSRNOG00000040301) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1374								ENSNGAG00000017993 #14	ENSNGAG00000021692	Ube3c (ENSNGAG00000021724) #16	ENSNGAG00000020250	Mnx1 (ENSNGAG00000002892) #17	Lmbr1 (ENSNGAG00000021357) #20	Rnf32 (ENSNGAG00000017198) #21	ENSNGAG00000013870	Shh (ENSNGAG00000024336) #22	ENSNGAG00000015914 #24	ENSNGAG00000012731 #24	ENSNGAG00000014003 #25	En2 (ENSNGAG00000019365) #26	Insig1 (ENSNGAG00000018486) #27	ENSNGAG00000001402	Htr5a (ENSNGAG00000023507) #28	Paxip1 (ENSNGAG00000022525) #29	Dpp6 (ENSNGAG00000001967) #30	Actr3b (ENSNGAG00000022250) #32	Xrcc2 (ENSNGAG00000015889) #33	Cct8l1 (ENSNGAG00000024263) #34	ENSNGAG00000008770 #35	ENSNGAG00000024244	Galnt11 (ENSNGAG00000016540) #36
Lesser Egyptian jerboa	MODERN SPECIES	172									ENSJJAG00000016951 #14	Ube3c (ENSJJAG00000021300) #16	Mnx1 (ENSJJAG00000009088) #17	Nom1 (ENSJJAG00000011716) #19	ENSJJAG00000011947	Lmbr1 (ENSJJAG00000012968) #20	Rnf32 (ENSJJAG00000017940) #21	Shh (ENSJJAG00000019136) #22	ENSJJAG00000020415 #24	ENSJJAG00000015197	ENSJJAG00000015641 #24	ENSJJAG00000016791 #25	En2 (ENSJJAG00000016874) #26	Insig1 (ENSJJAG00000018289) #27	Htr5a (ENSJJAG00000019192) #28	Paxip1 (ENSJJAG00000023948) #29	Dpp6 (ENSJJAG00000013246) #30	Actr3b (ENSJJAG00000018668) #32	ENSJJAG00000019172	ENSJJAG00000019327	Galnt11 (ENSJJAG00000024147) #36	Galntl5 (ENSJJAG00000004070) #37	ENSJJAG00000006959
Rodentia_A	ANCESTRAL SPECIES	12			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Hystricomorpha	ANCESTRAL SPECIES	35					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000042205 #30	ENSHGLG00000019103 #8	DYNC2I1 (ENSHGLG00000006228) #9	ESYT2 (ENSHGLG00000004302) #10	NCAPG2 (ENSHGLG00000005951) #11	ENSHGLG00000036053	ENSHGLG00000050437	ENSHGLG00000050124 #13	DNAJB6 (ENSHGLG00000018860) #14	UBE3C (ENSHGLG00000008254) #16	MNX1 (ENSHGLG00000006212) #17	NOM1 (ENSHGLG00000007392) #19	LMBR1 (ENSHGLG00000010444) #20	RNF32 (ENSHGLG00000037782) #21	ENSHGLG00000033097	SHH (ENSHGLG00000005693) #22	RBM33 (ENSHGLG00000008580) #24	ENSHGLG00000003981 #25	EN2 (ENSHGLG00000050255) #26	ENSHGLG00000018944 #27	HTR5A (ENSHGLG00000013321) #28	ENSHGLG00000038895	ENSHGLG00000010566 #30	ENSHGLG00000007949	ENSHGLG00000034272	ENSHGLG00000037188	TPK1 (ENSHGLG00000034976)	ENSHGLG00000042656	NOBOX (ENSHGLG00000047619)	ARHGEF5 (ENSHGLG00000013088)	ENSHGLG00000021206
Hystricomorpha_a	ANCESTRAL SPECIES	40					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Guinea pig	MODERN SPECIES	32	PPM1E (ENSCPOG00000037064)	RAD51C (ENSCPOG00000004586)	ENSCPOG00000001249	ENSCPOG00000027402	Vipr2 (ENSCPOG00000006143) #8	DYNC2I1 (ENSCPOG00000036377) #9	ESYT2 (ENSCPOG00000009970) #10	NCAPG2 (ENSCPOG00000009954) #11	ENSCPOG00000022941	DNAJB6 (ENSCPOG00000031435) #14	UBE3C (ENSCPOG00000013408) #16	ENSCPOG00000022207 #17	NOM1 (ENSCPOG00000025538) #19	LMBR1 (ENSCPOG00000003305) #20	RNF32 (ENSCPOG00000012026) #21	SHH (ENSCPOG00000023638) #22	RBM33 (ENSCPOG00000011852) #24	ENSCPOG00000009846 #25	EN2 (ENSCPOG00000024572) #26	INSIG1 (ENSCPOG00000014739) #27	HTR5A (ENSCPOG00000007970) #28	PAXIP1 (ENSCPOG00000001303) #29	DPP6 (ENSCPOG00000003511) #30	ENSCPOG00000003695 #32	XRCC2 (ENSCPOG00000012263) #33	CCT8L2 (ENSCPOG00000020546) #34	KMT2C (ENSCPOG00000001857)	GALNT11 (ENSCPOG00000005174) #36	GALNTL5 (ENSCPOG00000005168) #37	ENSCPOG00000022472	PRKAG2 (ENSCPOG00000015691)
Hystricomorpha_b	ANCESTRAL SPECIES	40					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h.jc.a #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.e	ENSGT00950000183019.f.a
Degu	MODERN SPECIES	68			VIPR2 (ENSODEG00000009696) #8	DYNC2I1 (ENSODEG00000013131) #9	ENSODEG00000010339	ESYT2 (ENSODEG00000011842) #10	NCAPG2 (ENSODEG00000012038) #11	ENSODEG00000011519 #14	UBE3C (ENSODEG00000009899) #16	MNX1 (ENSODEG00000010950) #17	NOM1 (ENSODEG00000009399) #19	ENSODEG00000019843	ENSODEG00000010749 #20	RNF32 (ENSODEG00000010017) #21	ENSODEG00000019851	SHH (ENSODEG00000010106) #22	ENSODEG00000009918 #24	ENSODEG00000010830 #24	ENSODEG00000010168 #25	EN2 (ENSODEG00000010942) #26	INSIG1 (ENSODEG00000010315) #27	HTR5A (ENSODEG00000014269) #28	PAXIP1 (ENSODEG00000011288) #29	DPP6 (ENSODEG00000011104) #30	ENSODEG00000009981 #32	ENSODEG00000009802	ENSODEG00000010322	ENSODEG00000010160	GALNT11 (ENSODEG00000010700) #36	GALNTL5 (ENSODEG00000010884) #37	ENSODEG00000010230
Long-tailed chinchilla	MODERN SPECIES	198														ENSCLAG00000001407 #20	RNF32 (ENSCLAG00000001359) #21	ENSCLAG00000001349 #22	RBM33 (ENSCLAG00000001190) #24	ENSCLAG00000001129 #25	ENSCLAG00000001118 #26	INSIG1 (ENSCLAG00000001112) #27	HTR5A (ENSCLAG00000001100) #28	PAXIP1 (ENSCLAG00000000995) #29	ENSCLAG00000002985	DPP6 (ENSCLAG00000002591) #30	ENSCLAG00000002298 #32	XRCC2 (ENSCLAG00000002275) #33	CCT8L2 (ENSCLAG00000002244) #34	KMT2C (ENSCLAG00000001864)	GALNT11 (ENSCLAG00000001492) #36	GALNTL5 (ENSCLAG00000001429) #37	PRKAG2 (ENSCLAG00000001384)
Sciuridae	ANCESTRAL SPECIES	7		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00960000191470	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00960000189764.a	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227.e #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Eurasian red squirrel	MODERN SPECIES	17	ENSSVLG00005004583	VIPR2 (ENSSVLG00005004620) #8	ENSSVLG00005004685 #9	ENSSVLG00005004697	ESYT2 (ENSSVLG00005004730) #10	NCAPG2 (ENSSVLG00005004770) #11	ENSSVLG00005004918	ENSSVLG00005004938	ENSSVLG00005004992 #14	UBE3C (ENSSVLG00005005098) #16	MNX1 (ENSSVLG00005005127) #17	NOM1 (ENSSVLG00005005155) #19	LMBR1 (ENSSVLG00005005244) #20	RNF32 (ENSSVLG00005005337) #21	ENSSVLG00005005359	SHH (ENSSVLG00005005393) #22	ENSSVLG00005005430 #24	ENSSVLG00005005471 #24	ENSSVLG00005005541 #25	EN2 (ENSSVLG00005005587) #26	INSIG1 (ENSSVLG00005005612) #27	HTR5A (ENSSVLG00005005652) #28	PAXIP1 (ENSSVLG00005005680) #29	DPP6 (ENSSVLG00005005798) #30	ENSSVLG00005006154 #32	XRCC2 (ENSSVLG00005006214) #33	CCT8L2 (ENSSVLG00005006281) #34	KMT2C (ENSSVLG00005006324)	ENSSVLG00005006622 #36	GALNTL5 (ENSSVLG00005006658) #37	PRKAG2 (ENSSVLG00005006761)
Marmotini	ANCESTRAL SPECIES	32				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227.e #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Marmotini_b	ANCESTRAL SPECIES	45																ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227.e #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Arctic ground squirrel	MODERN SPECIES	331																SHH (ENSUPAG00010012371) #22	RBM33 (ENSUPAG00010012258) #24	ENSUPAG00010012244 #25	EN2 (ENSUPAG00010012234) #26	INSIG1 (ENSUPAG00010012228) #27	HTR5A (ENSUPAG00010012226) #28	PAXIP1 (ENSUPAG00010012177) #29	DPP6 (ENSUPAG00010012064) #30
Squirrel	MODERN SPECIES	127																SHH (ENSSTOG00000021031) #22	RBM33 (ENSSTOG00000023973) #24	ENSSTOG00000033276	EN2 (ENSSTOG00000025941) #26	INSIG1 (ENSSTOG00000024857) #27	HTR5A (ENSSTOG00000014566) #28	PAXIP1 (ENSSTOG00000021376) #29	DPP6 (ENSSTOG00000003823) #30	ENSSTOG00000000969 #32	XRCC2 (ENSSTOG00000002470) #33	CCT8L2 (ENSSTOG00000025875) #34	KMT2C (ENSSTOG00000013723)	GALNT11 (ENSSTOG00000005132) #36	GALNTL5 (ENSSTOG00000012361) #37	PRKAG2 (ENSSTOG00000021632)	RHEB (ENSSTOG00000004544)
Alpin marmot	MODERN SPECIES	81													NOM1 (ENSMMMG00000018772) #19	LMBR1 (ENSMMMG00000018812) #20	RNF32 (ENSMMMG00000018872) #21	ENSMMMG00000018886 #22	RBM33 (ENSMMMG00000018896) #24	ENSMMMG00000018993 #25	INSIG1 (ENSMMMG00000019001) #27	HTR5A (ENSMMMG00000019020) #28	PAXIP1 (ENSMMMG00000019027) #29	AKAP9 (ENSMMMG00000019079)	MTERF1 (ENSMMMG00000020406)	FZD1 (ENSMMMG00000020409)	CDK14 (ENSMMMG00000020433)	PTTG1IP2 (ENSMMMG00000020470)	CLDN12 (ENSMMMG00000020483)	GTPBP10 (ENSMMMG00000020487)	ENSMMMG00000020515	FAM237B (ENSMMMG00000020520)	CFAP69 (ENSMMMG00000020526)
Primates	ANCESTRAL SPECIES	12				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Strepsirrhini	ANCESTRAL SPECIES	9					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Bushbaby	MODERN SPECIES	168			ZBTB14 (ENSOGAG00000009683)	EPB41L3 (ENSOGAG00000009686)	TMEM200C (ENSOGAG00000027984)	L3MBTL4 (ENSOGAG00000006203)	ENSOGAG00000029999	ARHGAP28 (ENSOGAG00000000195)	ENSOGAG00000026299	LRRC30 (ENSOGAG00000015239)	ENSOGAG00000028007	ENSOGAG00000028060	ENSOGAG00000033163	LMBR1 (ENSOGAG00000002085) #20	RNF32 (ENSOGAG00000002082) #21	ENSOGAG00000030068 #22	RBM33 (ENSOGAG00000032262) #24	ENSOGAG00000024373	ENSOGAG00000029258	ENSOGAG00000005578 #25	EN2 (ENSOGAG00000005579) #26	INSIG1 (ENSOGAG00000033732) #27	HTR5A (ENSOGAG00000034672) #28	PAXIP1 (ENSOGAG00000000702) #29	DPP6 (ENSOGAG00000008443) #30	ENSOGAG00000003249 #32	XRCC2 (ENSOGAG00000025679) #33	CCT8L2 (ENSOGAG00000028124) #34	ENSOGAG00000006574	ENSOGAG00000034047	GALNT11 (ENSOGAG00000006571) #36
Lemuriformes	ANCESTRAL SPECIES	4					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Mouse lemur	MODERN SPECIES	2										UBE3C (ENSMICG00000013340) #16	MNX1 (ENSMICG00000028566) #17	NOM1 (ENSMICG00000017531) #19	LMBR1 (ENSMICG00000015471) #20	ENSMICG00000044577	RNF32 (ENSMICG00000015458) #21	SHH (ENSMICG00000027721) #22	RBM33 (ENSMICG00000037987) #24	ENSMICG00000028627 #25	EN2 (ENSMICG00000036243) #26	INSIG1 (ENSMICG00000031879) #27	ENSMICG00000030603	PAXIP1 (ENSMICG00000014321) #29	DPP6 (ENSMICG00000017845) #30	ENSMICG00000026837	ENSMICG00000031851 #32	XRCC2 (ENSMICG00000032376) #33	ENSMICG00000012707	KMT2C (ENSMICG00000001060)	ENSMICG00000001057 #36	GALNTL5 (ENSMICG00000046553) #37	PRKAG2 (ENSMICG00000008109)
Lemuriformes_a	ANCESTRAL SPECIES	182				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.g.a.b ##14	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32
Greater bamboo lemur	MODERN SPECIES	827														LMBR1 (ENSPSMG00000003776) #20	RNF32 (ENSPSMG00000003801) #21	SHH (ENSPSMG00000003814) #22	ENSPSMG00000003818 #24
Coquerels sifaka	MODERN SPECIES	590											ENSPCOG00000014030 #16	MNX1 (ENSPCOG00000018270) #17	NOM1 (ENSPCOG00000015222) #19	LMBR1 (ENSPCOG00000026906) #20	RNF32 (ENSPCOG00000013638) #21	ENSPCOG00000020875 #22	RBM33 (ENSPCOG00000020701) #24	ENSPCOG00000010434 #25	EN2 (ENSPCOG00000004831) #26	INSIG1 (ENSPCOG00000015911) #27	HTR5A (ENSPCOG00000009795) #28	PAXIP1 (ENSPCOG00000022955) #29	DPP6 (ENSPCOG00000027541) #30
Haplorrhini	ANCESTRAL SPECIES	8				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Tarsier	MODERN SPECIES	2834																SHH (ENSTSYG00000028157) #22
Simiiformes	ANCESTRAL SPECIES	12				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37
Catarrhini	ANCESTRAL SPECIES	6			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00940000166009.a	ENSGT00390000001958.t.b	ENSGT00390000020445 #33
Hominoidea	ANCESTRAL SPECIES	6			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000162392.f	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00940000166009.a	ENSGT00390000001958.t.b	ENSGT00390000020445 #33	ENSGT00940000155281
Hominidae	ANCESTRAL SPECIES	11			ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000162392.f	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00910000147683	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00940000166009.a	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000162392.f	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00520000055567.a.a.b.c.b	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280.e #30	ENSGT00910000147683	ENSGT00940000156280.f #30	ENSGT00940000158304.n #32	ENSGT00940000166009.a	ENSGT00390000020445 #33	ENSGT00940000163221 #34
Homo/Pan group	ANCESTRAL SPECIES	15		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000162392.f	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00520000055567.a.a.b.c.b	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280.e #30	ENSGT00910000147683	ENSGT00940000156280.f #30	ENSGT00940000158304.n #32	ENSGT00940000166009.a	ENSGT00390000020445 #33	ENSGT00940000155281
Pan	ANCESTRAL SPECIES	13		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000162392.f	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00520000055567.a.a.b.c.b	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757.u #29	ENSGT00940000156280.e #30	ENSGT00910000147683	ENSGT00940000156280.f #30	ENSGT00940000158304.n #32	ENSGT00940000166009.a	ENSGT00390000020445 #33	ENSGT00940000163221.b #34
Chimpanzee	MODERN SPECIES	20	NOC2L (ENSPTRG00000022530)	SAMD11 (ENSPTRG00000023092)	VIPR2 (ENSPTRG00000019929) #8	DYNC2I1 (ENSPTRG00000048748) #9	ESYT2 (ENSPTRG00000043595) #10	NCAPG2 (ENSPTRG00000047803) #11	ENSPTRG00000052784	DNAJB6 (ENSPTRG00000046598) #14	ENSPTRG00000044290	UBE3C (ENSPTRG00000019919) #16	MNX1 (ENSPTRG00000019918) #17	NOM1 (ENSPTRG00000019917) #19	LMBR1 (ENSPTRG00000019915) #20	RNF32 (ENSPTRG00000019914) #21	ENSPTRG00000049188	SHH (ENSPTRG00000019912) #22	ENSPTRG00000046066	RBM33 (ENSPTRG00000019911) #24	CNPY1 (ENSPTRG00000049992) #25	EN2 (ENSPTRG00000028339) #26	ENSPTRG00000034315	INSIG1 (ENSPTRG00000019905) #27	HTR5A (ENSPTRG00000019904) #28	PAXIP1 (ENSPTRG00000019903) #29	ENSPTRG00000045579	DPP6 (ENSPTRG00000019901) #30	ACTR3B (ENSPTRG00000019897) #32	ENSPTRG00000046331	XRCC2 (ENSPTRG00000024178) #33	ENSPTRG00000045711	KMT2C (ENSPTRG00000019892)
Bonobo	MODERN SPECIES	20	DYNC2I1 (ENSPPAG00000038122) #9	ESYT2 (ENSPPAG00000042353) #10	NCAPG2 (ENSPPAG00000041688) #11	ENSPPAG00000042952	PTPRN2 (ENSPPAG00000004528) #13	ENSPPAG00000007358	DNAJB6 (ENSPPAG00000037151) #14	ENSPPAG00000031175	UBE3C (ENSPPAG00000036105) #16	ENSPPAG00000018182 #17	ENSPPAG00000043587	NOM1 (ENSPPAG00000041374) #19	LMBR1 (ENSPPAG00000038337) #20	RNF32 (ENSPPAG00000041833) #21	ENSPPAG00000008090	SHH (ENSPPAG00000033504) #22	ENSPPAG00000023779	RBM33 (ENSPPAG00000041249) #24	ENSPPAG00000041663 #25	ENSPPAG00000025081	INSIG1 (ENSPPAG00000037183) #27	HTR5A (ENSPPAG00000040362) #28	PAXIP1 (ENSPPAG00000034234) #29	ENSPPAG00000042096	DPP6 (ENSPPAG00000005641) #30	ENSPPAG00000033620	XRCC2 (ENSPPAG00000033251) #33	ENSPPAG00000023013 #34	ENSPPAG00000031660	KMT2C (ENSPPAG00000030550)	GALNT11 (ENSPPAG00000030364) #36
Human	MODERN SPECIES	19					VIPR2 (ENSG00000106018) #8	DYNC2I1 (ENSG00000126870) #9	ESYT2 (ENSG00000117868) #10	NCAPG2 (ENSG00000146918) #11	PTPRN2 (ENSG00000155093) #13	DNAJB6 (ENSG00000105993) #14	UBE3C (ENSG00000009335) #16	MNX1 (ENSG00000130675) #17	NOM1 (ENSG00000146909) #19	LMBR1 (ENSG00000105983) #20	RNF32 (ENSG00000105982) #21	SHH (ENSG00000164690) #22	RBM33 (ENSG00000184863) #24	ENSG00000283128 #25	CNPY1 (ENSG00000146910) #25	EN2 (ENSG00000164778) #26	INSIG1 (ENSG00000186480) #27	HTR5A (ENSG00000157219) #28	PAXIP1 (ENSG00000157212) #29	DPP6 (ENSG00000130226) #30	ACTR3B (ENSG00000133627) #32	XRCC2 (ENSG00000196584) #33	KMT2C (ENSG00000055609)	GALNT11 (ENSG00000178234) #36	GALNTL5 (ENSG00000106648) #37	PRKAG2 (ENSG00000106617)	RHEB (ENSG00000106615)
Gorilla	MODERN SPECIES	20		ENSGGOG00000007385 #8	DYNC2I1 (ENSGGOG00000016646) #9	ESYT2 (ENSGGOG00000012310) #10	NCAPG2 (ENSGGOG00000001976) #11	ENSGGOG00000036294	PTPRN2 (ENSGGOG00000038577) #13	DNAJB6 (ENSGGOG00000004703) #14	ENSGGOG00000028527	UBE3C (ENSGGOG00000005173) #16	ENSGGOG00000005374	NOM1 (ENSGGOG00000010920) #19	LMBR1 (ENSGGOG00000015072) #20	RNF32 (ENSGGOG00000004368) #21	ENSGGOG00000028281	SHH (ENSGGOG00000014018) #22	ENSGGOG00000040294	RBM33 (ENSGGOG00000003382) #24	ENSGGOG00000022669 #25	ENSGGOG00000022981 #26	ENSGGOG00000013793	INSIG1 (ENSGGOG00000001908) #27	HTR5A (ENSGGOG00000015522) #28	PAXIP1 (ENSGGOG00000024871) #29	ENSGGOG00000036953	ENSGGOG00000040700	DPP6 (ENSGGOG00000011070) #30	XRCC2 (ENSGGOG00000005955) #33	ENSGGOG00000005964	ENSGGOG00000042866	KMT2C (ENSGGOG00000025173)
Orangutan	MODERN SPECIES	20				ENSPPYG00000018236 #8	DYNC2I1 (ENSPPYG00000018235) #9	ESYT2 (ENSPPYG00000018234) #10	NCAPG2 (ENSPPYG00000018233) #11	PTPRN2 (ENSPPYG00000018231) #13	DNAJB6 (ENSPPYG00000018228) #14	UBE3C (ENSPPYG00000018227) #16	MNX1 (ENSPPYG00000018223) #17	NOM1 (ENSPPYG00000018222) #19	LMBR1 (ENSPPYG00000018221) #20	RNF32 (ENSPPYG00000018220) #21	ENSPPYG00000034826	SHH (ENSPPYG00000018217) #22	RBM33 (ENSPPYG00000018216) #24	ENSPPYG00000038190 #25	EN2 (ENSPPYG00000018213) #26	ENSPPYG00000040637	INSIG1 (ENSPPYG00000018212) #27	HTR5A (ENSPPYG00000018211) #28	PAXIP1 (ENSPPYG00000018210) #29	DPP6 (ENSPPYG00000018209) #30	ACTR3B (ENSPPYG00000018206) #32	XRCC2 (ENSPPYG00000018205) #33	ENSPPYG00000031368 #34	ENSPPYG00000018202	ENSPPYG00000018200 #35	ENSPPYG00000032475	GALNT11 (ENSPPYG00000018199) #36
Gibbon	MODERN SPECIES	3			ENSNLEG00000001865 #8	DYNC2I1 (ENSNLEG00000001739) #9	ESYT2 (ENSNLEG00000001587) #10	NCAPG2 (ENSNLEG00000001335) #11	ENSNLEG00000035113	PTPRN2 (ENSNLEG00000001515) #13	ENSNLEG00000001380 #14	ENSNLEG00000027734	UBE3C (ENSNLEG00000000246) #16	ENSNLEG00000029418	NOM1 (ENSNLEG00000000238) #19	LMBR1 (ENSNLEG00000000212) #20	ENSNLEG00000000197 #21	SHH (ENSNLEG00000015404) #22	RBM33 (ENSNLEG00000015394) #24	ENSNLEG00000015390 #25	EN2 (ENSNLEG00000015389) #26	INSIG1 (ENSNLEG00000010599) #27	HTR5A (ENSNLEG00000027859) #28	PAXIP1 (ENSNLEG00000010566) #29	ENSNLEG00000034748	DPP6 (ENSNLEG00000010474) #30	ENSNLEG00000027247	ENSNLEG00000031087	XRCC2 (ENSNLEG00000004686) #33	KMT2C (ENSNLEG00000004634)	GALNT11 (ENSNLEG00000004613) #36	GALNTL5 (ENSNLEG00000004591) #37	PRKAG2 (ENSNLEG00000004532)
Cercopithecidae	ANCESTRAL SPECIES	31	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00940000164719	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00910000147683	ENSGT00940000158304.n #32	ENSGT00390000001958.t.b
Rhinopithecus	ANCESTRAL SPECIES	325												ENSGT01010000226103	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00910000147683
Black snub-nosed monkey	MODERN SPECIES	2121										DNAJB6 (ENSRBIG00000038676) #14	UBE3C (ENSRBIG00000035688) #16	ENSRBIG00000042652	NOM1 (ENSRBIG00000037042) #19	LMBR1 (ENSRBIG00000040125) #20	RNF32 (ENSRBIG00000034506) #21	SHH (ENSRBIG00000029453) #22	ENSRBIG00000004367	RBM33 (ENSRBIG00000024788) #24	ENSRBIG00000005943	ENSRBIG00000003945 #25	EN2 (ENSRBIG00000042453) #26	ENSRBIG00000037586	INSIG1 (ENSRBIG00000036477) #27	ENSRBIG00000028749	HTR5A (ENSRBIG00000038906) #28	PAXIP1 (ENSRBIG00000044349) #29	DPP6 (ENSRBIG00000013385) #30	ENSRBIG00000030481
Golden snub-nosed monkey	MODERN SPECIES	1381												ENSRROG00000044904	NOM1 (ENSRROG00000037293) #19	LMBR1 (ENSRROG00000040330) #20	RNF32 (ENSRROG00000033188) #21	ENSRROG00000032102 #22	ENSRROG00000002134	RBM33 (ENSRROG00000028061) #24	ENSRROG00000017596	ENSRROG00000033288 #25	EN2 (ENSRROG00000030628) #26	ENSRROG00000042064	INSIG1 (ENSRROG00000032862) #27	ENSRROG00000045398	HTR5A (ENSRROG00000029225) #28	PAXIP1 (ENSRROG00000040839) #29	DPP6 (ENSRROG00000033824) #30
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00940000164719	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00390000001958.t.b	ENSGT00390000020445 #33
Vervet Monkey	MODERN SPECIES	13			ENSCSAG00000006389	VIPR2 (ENSCSAG00000006393) #8	ESYT2 (ENSCSAG00000006400) #10	NCAPG2 (ENSCSAG00000006413) #11	ENSCSAG00000006417	ENSCSAG00000006420	ENSCSAG00000006423 #13	DNAJB6 (ENSCSAG00000006424) #14	UBE3C (ENSCSAG00000006430) #16	MNX1 (ENSCSAG00000006434) #17	ENSCSAG00000006438	LMBR1 (ENSCSAG00000006466) #20	RNF32 (ENSCSAG00000006474) #21	SHH (ENSCSAG00000006480) #22	RBM33 (ENSCSAG00000006489) #24	ENSCSAG00000006494	ENSCSAG00000006497 #25	EN2 (ENSCSAG00000006501) #26	INSIG1 (ENSCSAG00000006509) #27	HTR5A (ENSCSAG00000006516) #28	ENSCSAG00000006520	PAXIP1 (ENSCSAG00000006529) #29	DPP6 (ENSCSAG00000006540) #30	ACTR3B (ENSCSAG00000006554) #32	XRCC2 (ENSCSAG00000006557) #33	CCT8L2 (ENSCSAG00000019526) #34	KMT2C (ENSCSAG00000006581)	GALNT11 (ENSCSAG00000006587) #36	PRKAG2 (ENSCSAG00000006594)
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00940000164719	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00390000001958.t.b	ENSGT00390000020445 #33
Cercopithecinae_b	ANCESTRAL SPECIES	38	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00910000148164	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00940000164719	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00910000147741	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34
Olive baboon	MODERN SPECIES	14	NCAPG2 (ENSPANG00000006916) #11	ESYT2 (ENSPANG00000008927) #10	DYNC2I1 (ENSPANG00000014226) #9	VIPR2 (ENSPANG00000008527) #8	PTPRN2 (ENSPANG00000011573) #13	DNAJB6 (ENSPANG00000040922) #14	UBE3C (ENSPANG00000008928) #16	ENSPANG00000042777	ENSPANG00000042795	ENSPANG00000023831	NOM1 (ENSPANG00000007605) #19	ENSPANG00000049523	LMBR1 (ENSPANG00000018924) #20	RNF32 (ENSPANG00000021592) #21	ENSPANG00000048422	SHH (ENSPANG00000008528) #22	RBM33 (ENSPANG00000024167) #24	ENSPANG00000008929 #25	ENSPANG00000025756	EN2 (ENSPANG00000043821) #26	ENSPANG00000017185 #27	HTR5A (ENSPANG00000021639) #28	ENSPANG00000049230	PAXIP1 (ENSPANG00000007658) #29	DPP6 (ENSPANG00000015940) #30	ACTR3B (ENSPANG00000006816) #32	ENSPANG00000029546	ENSPANG00000044496	ENSPANG00000009335	ENSPANG00000046669	XRCC2 (ENSPANG00000015849) #33
Cercopithecinae_d	ANCESTRAL SPECIES	153	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00910000148164	ENSGT00910000147502	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT01010000226103	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00910000147741	ENSGT00940000155757 #29	ENSGT00940000156280 #30
Sooty mangabey	MODERN SPECIES	403																SHH (ENSCATG00000038726) #22	ENSCATG00000015797	ENSCATG00000016263	RBM33 (ENSCATG00000037104) #24	ENSCATG00000034391 #25	EN2 (ENSCATG00000029457) #26	ENSCATG00000013448	INSIG1 (ENSCATG00000037834) #27	ENSCATG00000023263	HTR5A (ENSCATG00000035923) #28	ENSCATG00000015887	PAXIP1 (ENSCATG00000030538) #29	DPP6 (ENSCATG00000031556) #30
Drill	MODERN SPECIES	372										UBE3C (ENSMLEG00000033468) #16	ENSMLEG00000000128	NOM1 (ENSMLEG00000037062) #19	LMBR1 (ENSMLEG00000031227) #20	RNF32 (ENSMLEG00000035860) #21	ENSMLEG00000032829	ENSMLEG00000042622 #22	ENSMLEG00000012115	ENSMLEG00000012175	RBM33 (ENSMLEG00000036889) #24	ENSMLEG00000031054 #25	ENSMLEG00000040055	ENSMLEG00000032842 #27	ENSMLEG00000032075	HTR5A (ENSMLEG00000040436) #28	ENSMLEG00000006011	PAXIP1 (ENSMLEG00000042366) #29	DPP6 (ENSMLEG00000033104) #30
Macaca	ANCESTRAL SPECIES	3		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00910000148164	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00860000136072	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00910000148142	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00500000045650	ENSGT00580000081600.c.a #27	ENSGT00940000154437.mc.a.a.b.a	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304.n #32	ENSGT00390000001958.t.b	ENSGT00390000020445 #33
Pig-tailed macaque	MODERN SPECIES	531		VIPR2 (ENSMNEG00000036368) #8	DYNC2I1 (ENSMNEG00000042730) #9	ESYT2 (ENSMNEG00000038312) #10	NCAPG2 (ENSMNEG00000045210) #11	ENSMNEG00000042891	ENSMNEG00000032268	ENSMNEG00000034438	DNAJB6 (ENSMNEG00000042040) #14	UBE3C (ENSMNEG00000033458) #16	MNX1 (ENSMNEG00000033207) #17	ENSMNEG00000043106	LMBR1 (ENSMNEG00000028893) #20	RNF32 (ENSMNEG00000045411) #21	ENSMNEG00000030713	SHH (ENSMNEG00000042217) #22	ENSMNEG00000015146	ENSMNEG00000005072	RBM33 (ENSMNEG00000034730) #24	ENSMNEG00000019992 #25	EN2 (ENSMNEG00000032127) #26	ENSMNEG00000032140	INSIG1 (ENSMNEG00000031299) #27	ENSMNEG00000032622	HTR5A (ENSMNEG00000037299) #28	ENSMNEG00000019461	PAXIP1 (ENSMNEG00000029988) #29	DPP6 (ENSMNEG00000034350) #30	ACTR3B (ENSMNEG00000033219) #32	ENSMNEG00000022342	XRCC2 (ENSMNEG00000043329) #33
Macaca_a	ANCESTRAL SPECIES	7		ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.b.b.a.a.a.a.a.b.a	ENSGT00490000043432 #11	ENSGT00910000148164	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00910000147542	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.b.b.b.b	ENSGT00940000161627.a.a.a.b.b.b.b.a.a.a.a.a.a.b.a.a.b.a.d.b	ENSGT00940000158304.n #32	ENSGT00390000001958.t.b	ENSGT00390000020445 #33	ENSGT00940000163221 #34
Rhesus	MODERN SPECIES	13		VIPR2 (ENSMMUG00000009611) #8	DYNC2I1 (ENSMMUG00000006973) #9	ENSMMUG00000063846	ESYT2 (ENSMMUG00000022361) #10	ENSMMUG00000065267	NCAPG2 (ENSMMUG00000013719) #11	ENSMMUG00000051283	PTPRN2 (ENSMMUG00000022806) #13	DNAJB6 (ENSMMUG00000003176) #14	UBE3C (ENSMMUG00000008733) #16	MNX1 (ENSMMUG00000056863) #17	NOM1 (ENSMMUG00000039033)	LMBR1 (ENSMMUG00000011750) #20	RNF32 (ENSMMUG00000011748) #21	SHH (ENSMMUG00000062128) #22	RBM33 (ENSMMUG00000007351) #24	CNPY1 (ENSMMUG00000007770) #25	EN2 (ENSMMUG00000061717) #26	INSIG1 (ENSMMUG00000062591) #27	HTR5A (ENSMMUG00000013084) #28	ENSMMUG00000062987	PAXIP1 (ENSMMUG00000006331) #29	ENSMMUG00000052584	ENSMMUG00000052833	DPP6 (ENSMMUG00000006328) #30	ENSMMUG00000065142	ENSMMUG00000065266	ENSMMUG00000061812	ACTR3B (ENSMMUG00000018920) #32	ENSMMUG00000049416
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000048520	ESYT2 (ENSMFAG00000033330) #10	ENSMFAG00000057063	NCAPG2 (ENSMFAG00000040814) #11	ENSMFAG00000030774	ENSMFAG00000041948	ENSMFAG00000055786 #13	ENSMFAG00000057132	DNAJB6 (ENSMFAG00000036682) #14	UBE3C (ENSMFAG00000001035) #16	MNX1 (ENSMFAG00000043162) #17	ENSMFAG00000052766	ENSMFAG00000012538	LMBR1 (ENSMFAG00000031812) #20	RNF32 (ENSMFAG00000002920) #21	SHH (ENSMFAG00000064015) #22	ENSMFAG00000054556	RBM33 (ENSMFAG00000030258) #24	ENSMFAG00000060135	ENSMFAG00000040636 #25	EN2 (ENSMFAG00000049184) #26	INSIG1 (ENSMFAG00000038429) #27	ENSMFAG00000055379	HTR5A (ENSMFAG00000046388) #28	ENSMFAG00000063419	ENSMFAG00000060743	ENSMFAG00000048313	PAXIP1 (ENSMFAG00000035337) #29	ENSMFAG00000047760	DPP6 (ENSMFAG00000000652) #30	ENSMFAG00000049687
Platyrrhini	ANCESTRAL SPECIES	10				ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h.ab.a.a.a #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Mas night monkey	MODERN SPECIES	1050		VIPR2 (ENSANAG00000024103) #8	DYNC2I1 (ENSANAG00000030447) #9	ESYT2 (ENSANAG00000019778) #10	NCAPG2 (ENSANAG00000029627) #11	ENSANAG00000026104	ENSANAG00000026862 #13	ENSANAG00000029187 #14	UBE3C (ENSANAG00000030081) #16	MNX1 (ENSANAG00000031648) #17	ENSANAG00000020425	ENSANAG00000021639	LMBR1 (ENSANAG00000026160) #20	ENSANAG00000025885	RNF32 (ENSANAG00000035219) #21	ENSANAG00000030048 #22	RBM33 (ENSANAG00000032494) #24	ENSANAG00000024223 #25	EN2 (ENSANAG00000034609) #26	INSIG1 (ENSANAG00000026708) #27	HTR5A (ENSANAG00000027051) #28	PAXIP1 (ENSANAG00000030136) #29	DPP6 (ENSANAG00000023529) #30
Cebidae	ANCESTRAL SPECIES	9					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h.ab.a.a.a #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Marmoset	MODERN SPECIES	20	ANKRD7 (ENSCJAG00000004788)	VIPR2 (ENSCJAG00000014084) #8	DYNC2I1 (ENSCJAG00000014109) #9	ESYT2 (ENSCJAG00000014123) #10	NCAPG2 (ENSCJAG00000015156) #11	PTPRN2 (ENSCJAG00000005320) #13	DNAJB6 (ENSCJAG00000005288) #14	ENSCJAG00000085556	UBE3C (ENSCJAG00000004298) #16	ENSCJAG00000078997	ENSCJAG00000004336	ENSCJAG00000079983	LMBR1 (ENSCJAG00000004344) #20	RNF32 (ENSCJAG00000004357) #21	ENSCJAG00000080466	SHH (ENSCJAG00000020423) #22	RBM33 (ENSCJAG00000020427) #24	ENSCJAG00000053198	ENSCJAG00000045734 #25	EN2 (ENSCJAG00000080094) #26	INSIG1 (ENSCJAG00000018517) #27	ENSCJAG00000073273	HTR5A (ENSCJAG00000083175) #28	PAXIP1 (ENSCJAG00000000161) #29	DPP6 (ENSCJAG00000000167) #30	ENSCJAG00000082850 #30	ACTR3B (ENSCJAG00000019650) #32	ENSCJAG00000071228	ENSCJAG00000085430	XRCC2 (ENSCJAG00000032080) #33	KMT2C (ENSCJAG00000019672)
Cebidae_a	ANCESTRAL SPECIES	33					ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205.h.ab.a.a.a #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00500000045852	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Capuchin	MODERN SPECIES	20				VIPR2 (ENSCCAG00000022804) #8	DYNC2I1 (ENSCCAG00000028781) #9	ESYT2 (ENSCCAG00000035271) #10	NCAPG2 (ENSCCAG00000034720) #11	PTPRN2 (ENSCCAG00000035898) #13	ENSCCAG00000034700 #14	UBE3C (ENSCCAG00000020983) #16	MNX1 (ENSCCAG00000021938) #17	NOM1 (ENSCCAG00000014944) #19	LMBR1 (ENSCCAG00000025726) #20	RNF32 (ENSCCAG00000031451) #21	ENSCCAG00000025580	SHH (ENSCCAG00000034451) #22	RBM33 (ENSCCAG00000033957) #24	ENSCCAG00000026142 #25	EN2 (ENSCCAG00000035505) #26	INSIG1 (ENSCCAG00000028779) #27	HTR5A (ENSCCAG00000037605) #28	PAXIP1 (ENSCCAG00000032704) #29	DPP6 (ENSCCAG00000038118) #30	ACTR3B (ENSCCAG00000019061) #32	XRCC2 (ENSCCAG00000031051) #33	ENSCCAG00000029518	KMT2C (ENSCCAG00000035578)	GALNT11 (ENSCCAG00000026999) #36	GALNTL5 (ENSCCAG00000030227) #37	PRKAG2 (ENSCCAG00000029818)	RHEB (ENSCCAG00000030751)
Bolivian squirrel monkey	MODERN SPECIES	193			ENSSBOG00000025632	VIPR2 (ENSSBOG00000008700) #8	DYNC2I1 (ENSSBOG00000030479) #9	ESYT2 (ENSSBOG00000027315) #10	NCAPG2 (ENSSBOG00000023699) #11	PTPRN2 (ENSSBOG00000024253) #13	ENSSBOG00000021508	ENSSBOG00000019223 #14	UBE3C (ENSSBOG00000028621) #16	ENSSBOG00000017310 #17	ENSSBOG00000022284	LMBR1 (ENSSBOG00000024908) #20	RNF32 (ENSSBOG00000024131) #21	ENSSBOG00000019819 #22	RBM33 (ENSSBOG00000029765) #24	ENSSBOG00000025648 #25	ENSSBOG00000025158 #27	HTR5A (ENSSBOG00000018779) #28	ENSSBOG00000014188	PAXIP1 (ENSSBOG00000023365) #29	ENSSBOG00000024425 #30
Atlantogenata	ANCESTRAL SPECIES	90								ENSGT00940000154095.b.a #13	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000162156 #37	ENSGT00950000183019.f.a	ENSGT00940000159945
Afrotheria	ANCESTRAL SPECIES	214								ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22
Afrotheria_a	ANCESTRAL SPECIES	215								ENSGT00490000043432 #11	ENSGT00940000154095.b.a #13	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22
Elephant	MODERN SPECIES	634								NCAPG2 (ENSLAFG00000000690) #11	ENSLAFG00000011861 #13	ENSLAFG00000013384 #14	UBE3C (ENSLAFG00000003403) #16	ENSLAFG00000027756 #17	NOM1 (ENSLAFG00000007119) #19	LMBR1 (ENSLAFG00000017746) #20	RNF32 (ENSLAFG00000017742) #21	SHH (ENSLAFG00000022332) #22
Hyrax	MODERN SPECIES	11054																SHH (ENSPCAG00000001507) #22
Tenrec	MODERN SPECIES	5689																SHH (ENSETEG00000018605) #22
Xenarthra	ANCESTRAL SPECIES	343									ENSGT00940000154095.b.a #13	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000165657	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27
Armadillo	MODERN SPECIES	1583									ENSDNOG00000037872 #13	ENSDNOG00000006607 #14	UBE3C (ENSDNOG00000010852) #16	ENSDNOG00000040760 #17	ENSDNOG00000039421	LMBR1 (ENSDNOG00000015379) #20	RNF32 (ENSDNOG00000024887) #21	SHH (ENSDNOG00000049380) #22	RBM33 (ENSDNOG00000001637) #24	ENSDNOG00000042554 #25	EN2 (ENSDNOG00000037306) #26	INSIG1 (ENSDNOG00000049163) #27	ENSDNOG00000007044
Sloth	MODERN SPECIES	5203																ENSCHOG00000005004 #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00390000018475	ENSGT00940000157755	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00950000183019.f.a	ENSGT00940000159945	ENSGT00940000159301
Opossum	MODERN SPECIES	7	DIP2C (ENSMODG00000005692)	ZMYND11 (ENSMODG00000005572)	VIPR2 (ENSMODG00000005472) #8	DYNC2I1 (ENSMODG00000005458) #9	ESYT2 (ENSMODG00000005435) #10	NCAPG2 (ENSMODG00000005391) #11	ENSMODG00000041916	ENSMODG00000005254 #14	UBE3C (ENSMODG00000005239) #16	MNX1 (ENSMODG00000005191) #17	NOM1 (ENSMODG00000005177) #19	ENSMODG00000005104	ENSMODG00000049270	LMBR1 (ENSMODG00000005081) #20	RNF32 (ENSMODG00000005073) #21	SHH (ENSMODG00000005028) #22	RBM33 (ENSMODG00000005006) #24	ENSMODG00000004981 #25	EN2 (ENSMODG00000004978) #26	INSIG1 (ENSMODG00000004974) #27	ENSMODG00000042569	HTR5A (ENSMODG00000004969) #28	PAXIP1 (ENSMODG00000004929) #29	ENSMODG00000050513	DPP6 (ENSMODG00000004898) #30	ENSMODG00000004852 #32	XRCC2 (ENSMODG00000045998) #33	ENSMODG00000024163	ENSMODG00000038744	ENSMODG00000004745 #35	ENSMODG00000004731
Marsupialia_b	ANCESTRAL SPECIES	10	ENSGT00390000018475	ENSGT00940000157755	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000165471	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000165841	ENSGT00950000183019.f.a	ENSGT00940000159945
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000013392	DIP2C (ENSSHAG00000008932)	ENSSHAG00000007920	ENSSHAG00000026146	ENSSHAG00000030298 #8	DYNC2I1 (ENSSHAG00000013290) #9	ESYT2 (ENSSHAG00000012714) #10	NCAPG2 (ENSSHAG00000011995) #11	ENSSHAG00000028187	DNAJB6 (ENSSHAG00000024648) #14	UBE3C (ENSSHAG00000018274) #16	MNX1 (ENSSHAG00000018063) #17	NOM1 (ENSSHAG00000017998) #19	LMBR1 (ENSSHAG00000017702) #20	RNF32 (ENSSHAG00000017594) #21	SHH (ENSSHAG00000015579) #22	RBM33 (ENSSHAG00000015046) #24	ENSSHAG00000014325 #25	EN2 (ENSSHAG00000025988) #26	INSIG1 (ENSSHAG00000013105) #27	HTR5A (ENSSHAG00000011711) #28	PAXIP1 (ENSSHAG00000010983) #29	ENSSHAG00000031876 #30	ENSSHAG00000004913 #30	ENSSHAG00000030988	ENSSHAG00000026902	ENSSHAG00000014717 #32	XRCC2 (ENSSHAG00000014123) #33	ENSSHAG00000013137 #34	KMT2C (ENSSHAG00000011852)	ENSSHAG00000011660 #36
Diprotodontia	ANCESTRAL SPECIES	41	ENSGT00390000008527.k.a.a.a	ENSGT00390000018475	ENSGT00940000157755	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00950000183019.f.a	ENSGT00940000159945	ENSGT00940000159301
Wallaby	MODERN SPECIES	7063																SHH (ENSMEUG00000001695) #22
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT00390000018475	ENSGT00940000157755	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000158089 #8	ENSGT00390000013743 #9	ENSGT00940000156086 #10	ENSGT00490000043432 #11	ENSGT00940000154205 #14	ENSGT00940000156321 #16	ENSGT00940000160059.a.a #17	ENSGT00940000153458.A #19	ENSGT00390000008142.d	ENSGT00390000007809.b #20	ENSGT00390000003759 #21	ENSGT00940000159119.b #22	ENSGT00530000063891 #24	ENSGT00940000161119 #25	ENSGT00940000159935 #26	ENSGT00580000081600.c.a #27	ENSGT01010000222287.B.a.b.a #28	ENSGT00940000155757 #29	ENSGT00940000156280 #30	ENSGT00940000158304 #32	ENSGT00390000020445 #33	ENSGT00940000163221 #34	ENSGT00940000155281	ENSGT00940000158227 #36	ENSGT00940000161513	ENSGT00390000004986	ENSGT00950000183201.a
Common wonbat	MODERN SPECIES	1078	LARP4B (ENSVURG00010010223)	DIP2C (ENSVURG00010010133)	ZMYND11 (ENSVURG00010009627)	VIPR2 (ENSVURG00010009581) #8	DYNC2I1 (ENSVURG00010009431) #9	ESYT2 (ENSVURG00010009369) #10	NCAPG2 (ENSVURG00010009349) #11	ENSVURG00010009336	DNAJB6 (ENSVURG00010009313) #14	UBE3C (ENSVURG00010009275) #16	MNX1 (ENSVURG00010009257) #17	NOM1 (ENSVURG00010009225) #19	ENSVURG00010009217	LMBR1 (ENSVURG00010009194) #20	RNF32 (ENSVURG00010009165) #21	SHH (ENSVURG00010009153) #22	RBM33 (ENSVURG00010009090) #24	ENSVURG00010009059 #25	EN2 (ENSVURG00010009048) #26	INSIG1 (ENSVURG00010009036) #27	HTR5A (ENSVURG00010009022) #28	PAXIP1 (ENSVURG00010009000) #29	DPP6 (ENSVURG00010008370) #30	ENSVURG00010008306 #32	XRCC2 (ENSVURG00010008303) #33	CCT8L2 (ENSVURG00010008290) #34	KMT2C (ENSVURG00010008237)	ENSVURG00010008190 #36	ENSVURG00010008177 #36	ENSVURG00010008171	ENSVURG00010008159
koala	MODERN SPECIES	138								ENSPCIG00000027927	ENSPCIG00000027925 #14	UBE3C (ENSPCIG00000027933) #16	MNX1 (ENSPCIG00000027938) #17	NOM1 (ENSPCIG00000027941) #19	ENSPCIG00000027945	LMBR1 (ENSPCIG00000027948) #20	RNF32 (ENSPCIG00000027952) #21	SHH (ENSPCIG00000003301) #22	ENSPCIG00000003326 #24	ENSPCIG00000000432 #25	EN2 (ENSPCIG00000000313) #26	INSIG1 (ENSPCIG00000000292) #27	HTR5A (ENSPCIG00000017460) #28	PAXIP1 (ENSPCIG00000017461) #29	DPP6 (ENSPCIG00000017463) #30	ENSPCIG00000007563 #32	XRCC2 (ENSPCIG00000012386) #33	ENSPCIG00000031504	CCT8L2 (ENSPCIG00000012384) #34	KMT2C (ENSPCIG00000012259)	GALNT11 (ENSPCIG00000012247) #36	ENSPCIG00000028692	PRKAG2 (ENSPCIG00000028690)