Vertebrata ANCESTRAL SPECIES 3 ENSGT00940000157602 #17 ENSGT00940000164516 ENSGT00390000016607 #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 Gnathostomata ANCESTRAL SPECIES 61 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000164516 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 Euteleostomi ANCESTRAL SPECIES 6 ENSGT00940000176052 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000164516 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 Sarcopterygii ANCESTRAL SPECIES 98 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000164516 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B Tetrapoda ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000166322 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000154969.a ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.b ENSGT00940000153941.a.a Amniota ANCESTRAL SPECIES 15 ENSGT00940000163854.b ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000166322 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 Mammalia ANCESTRAL SPECIES 68 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000166322 ENSGT00940000157011 ENSGT00940000159103 Theria ANCESTRAL SPECIES 22 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000166322 ENSGT00940000157011 ENSGT00510000050001 ENSGT00940000159103 ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000162591 ENSGT00390000005362 Eutheria ANCESTRAL SPECIES 8 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00390000014572 ENSGT00940000159331.b #26 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257 #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Primates ANCESTRAL SPECIES 2 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 Haplorrhini ANCESTRAL SPECIES 17 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 2 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 ENSGT00910000147045 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Catarrhini ANCESTRAL SPECIES 20 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 ENSGT00910000147045 Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00940000154384.h.b ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00940000154384.h.b ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 Vervet Monkey MODERN SPECIES 18 TEX9 (ENSCSAG00000011830) #7 MNS1 (ENSCSAG00000011864) #8 ZNF280D (ENSCSAG00000011884) #9 TCF12 (ENSCSAG00000011901) #10 CGNL1 (ENSCSAG00000011914) #11 MYZAP (ENSCSAG00000011923) #12 POLR2M (ENSCSAG00000011931) #13 ENSCSAG00000011949 #14 ALDH1A2 (ENSCSAG00000011956) #15 AQP9 (ENSCSAG00000011963) #16 LIPC (ENSCSAG00000011971) #17 ADAM10 (ENSCSAG00000011980) #18 MINDY2 (ENSCSAG00000011994) #19 SLTM (ENSCSAG00000012004) #20 RNF111 (ENSCSAG00000012015) #21 CCNB2 (ENSCSAG00000012024) #22 LDHAL6B (ENSCSAG00000019742) #23 MYO1E (ENSCSAG00000012036) #24 FAM81A (ENSCSAG00000012043) #25 GCNT3 (ENSCSAG00000019741) #26 BNIP2 (ENSCSAG00000012052) #27 FOXB1 (ENSCSAG00000019740) #28 ANXA2 (ENSCSAG00000012062) #29 ICE2 (ENSCSAG00000012073) #30 RORA (ENSCSAG00000012081) #31 VPS13C (ENSCSAG00000012132) #32 C2CD4A (ENSCSAG00000019739) #33 C2CD4B (ENSCSAG00000019738) #34 ENSCSAG00000012210 #35 ENSCSAG00000012237 #36 TLN2 (ENSCSAG00000012262) #37 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000163242.e #23 ENSGT00940000157461 #24 ENSGT00390000018706.m.a ENSGT00940000154384.h.b ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00910000147045 Macaca ANCESTRAL SPECIES 1 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00390000018706.m.a ENSGT00940000154384.h.b ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00910000147045 ENSGT00940000154699 #37 Pig-tailed macaque MODERN SPECIES 77 MNS1 (ENSMNEG00000041140) #8 ZNF280D (ENSMNEG00000042755) #9 ENSMNEG00000038740 TCF12 (ENSMNEG00000034483) #10 CGNL1 (ENSMNEG00000036681) #11 MYZAP (ENSMNEG00000036884) #12 ENSMNEG00000031595 #14 AQP9 (ENSMNEG00000041178) #16 ALDH1A2 (ENSMNEG00000035893) #15 LIPC (ENSMNEG00000034628) #17 ADAM10 (ENSMNEG00000040922) #18 MINDY2 (ENSMNEG00000042969) #19 ENSMNEG00000021451 SLTM (ENSMNEG00000025105) #20 RNF111 (ENSMNEG00000004287) #21 CCNB2 (ENSMNEG00000038718) #22 MYO1E (ENSMNEG00000002815) #24 ENSMNEG00000041217 ENSMNEG00000038663 FAM81A (ENSMNEG00000029984) #25 GCNT3 (ENSMNEG00000013859) #26 GTF2A2 (ENSMNEG00000030439) BNIP2 (ENSMNEG00000033516) #27 FOXB1 (ENSMNEG00000015910) #28 ANXA2 (ENSMNEG00000043015) #29 ICE2 (ENSMNEG00000034514) #30 RORA (ENSMNEG00000020975) #31 VPS13C (ENSMNEG00000030758) #32 ENSMNEG00000013327 TLN2 (ENSMNEG00000028802) #37 ENSMNEG00000034201 Macaca_a ANCESTRAL SPECIES 2 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00390000004985.b #25 ENSGT00940000154384.h.b ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00940000164709.a.b.b.a.b.b.b.b.a.a.d.b ENSGT00940000164709.a.b.b.a.a.a.a.a.b.a ENSGT00950000183083.a.d.a #32 ENSGT00390000008820.e.b.a.a.a Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000055870 RFX7 (ENSMFAG00000033176) TEX9 (ENSMFAG00000037934) #7 MNS1 (ENSMFAG00000027011) #8 ZNF280D (ENSMFAG00000036502) #9 TCF12 (ENSMFAG00000031115) #10 CGNL1 (ENSMFAG00000036711) #11 MYZAP (ENSMFAG00000035568) #12 ALDH1A2 (ENSMFAG00000037327) #15 AQP9 (ENSMFAG00000039733) #16 LIPC (ENSMFAG00000034000) #17 ADAM10 (ENSMFAG00000003773) #18 MINDY2 (ENSMFAG00000033162) #19 SLTM (ENSMFAG00000033354) #20 RNF111 (ENSMFAG00000031221) #21 CCNB2 (ENSMFAG00000042779) #22 MYO1E (ENSMFAG00000032366) #24 LDHAL6B (ENSMFAG00000049071) #23 ENSMFAG00000048877 FAM81A (ENSMFAG00000044204) #25 ENSMFAG00000045407 GCNT3 (ENSMFAG00000038485) #26 ENSMFAG00000034656 BNIP2 (ENSMFAG00000033391) #27 ENSMFAG00000063104 FOXB1 (ENSMFAG00000013645) #28 ANXA2 (ENSMFAG00000030479) #29 ICE2 (ENSMFAG00000036919) #30 RORA (ENSMFAG00000043163) #31 ENSMFAG00000055173 ENSMFAG00000058783 Rhesus MODERN SPECIES 17 TEX9 (ENSMMUG00000019484) #7 MNS1 (ENSMMUG00000019485) #8 ZNF280D (ENSMMUG00000008718) #9 TCF12 (ENSMMUG00000004091) #10 CGNL1 (ENSMMUG00000005179) #11 MYZAP (ENSMMUG00000012690) #12 ALDH1A2 (ENSMMUG00000019504) #15 AQP9 (ENSMMUG00000011225) #16 LIPC (ENSMMUG00000009566) #17 ADAM10 (ENSMMUG00000017507) #18 MINDY2 (ENSMMUG00000018109) #19 ENSMMUG00000061679 SLTM (ENSMMUG00000022200) #20 RNF111 (ENSMMUG00000013089) #21 ENSMMUG00000063524 CCNB2 (ENSMMUG00000029628) #22 MYO1E (ENSMMUG00000012933) #24 LDHAL6B (ENSMMUG00000060242) #23 FAM81A (ENSMMUG00000016390) #25 GCNT3 (ENSMMUG00000018426) #26 GTF2A2 (ENSMMUG00000039935) BNIP2 (ENSMMUG00000020348) #27 FOXB1 (ENSMMUG00000001379) #28 ANXA2 (ENSMMUG00000012000) #29 ICE2 (ENSMMUG00000021320) #30 RORA (ENSMMUG00000018192) #31 ENSMMUG00000050503 ENSMMUG00000054271 ENSMMUG00000058446 ENSMMUG00000058418 ENSMMUG00000063453 Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000163242.e #23 ENSGT00940000157461 #24 ENSGT00390000018706.m.a ENSGT00940000154384.h.b ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00440000034918.r.i ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 Olive baboon DUPLICATION Olive baboon MODERN SPECIES 80 ENSPANG00000039559 #21 ENSPANG00000017195 #22 ENSPANG00000046812 #23 ENSPANG00000048292 #24 Olive baboon MODERN SPECIES 88 ENSPANG00000047271 #21 ENSPANG00000043704 #22 ENSPANG00000017196 #24 ENSPANG00000049121 #23 Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00390000018706.m.a ENSGT00940000154384.h.b ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00390000008820.e.b.a.a.a.a ENSGT00910000147045 Sooty mangabey MODERN SPECIES 336 RFX7 (ENSCATG00000041703) TEX9 (ENSCATG00000030510) #7 MNS1 (ENSCATG00000038230) #8 ZNF280D (ENSCATG00000012535) #9 ENSCATG00000042348 TCF12 (ENSCATG00000014938) #10 CGNL1 (ENSCATG00000036319) #11 MYZAP (ENSCATG00000041308) #12 AQP9 (ENSCATG00000044019) #16 ALDH1A2 (ENSCATG00000044324) #15 LIPC (ENSCATG00000039767) #17 ADAM10 (ENSCATG00000041125) #18 MINDY2 (ENSCATG00000043333) #19 SLTM (ENSCATG00000030254) #20 RNF111 (ENSCATG00000040370) #21 CCNB2 (ENSCATG00000037096) #22 MYO1E (ENSCATG00000034350) #24 ENSCATG00000030798 ENSCATG00000043413 FAM81A (ENSCATG00000031214) #25 GCNT3 (ENSCATG00000040930) #26 ENSCATG00000040454 BNIP2 (ENSCATG00000039445) #27 ENSCATG00000033079 FOXB1 (ENSCATG00000021214) #28 ENSCATG00000034012 ANXA2 (ENSCATG00000043236) #29 ICE2 (ENSCATG00000043106) #30 RORA (ENSCATG00000041834) #31 VPS13C (ENSCATG00000041944) #32 ENSCATG00000020724 Drill MODERN SPECIES 868 TCF12 (ENSMLEG00000028923) #10 ENSMLEG00000037759 CGNL1 (ENSMLEG00000028818) #11 ENSMLEG00000038639 MYZAP (ENSMLEG00000005112) #12 ALDH1A2 (ENSMLEG00000036167) #15 AQP9 (ENSMLEG00000041087) #16 LIPC (ENSMLEG00000030869) #17 ADAM10 (ENSMLEG00000044106) #18 MINDY2 (ENSMLEG00000032776) #19 ENSMLEG00000028041 SLTM (ENSMLEG00000043355) #20 RNF111 (ENSMLEG00000043927) #21 CCNB2 (ENSMLEG00000032744) #22 MYO1E (ENSMLEG00000028117) #24 ENSMLEG00000014742 FAM81A (ENSMLEG00000041731) #25 ENSMLEG00000035811 GCNT3 (ENSMLEG00000027511) #26 GTF2A2 (ENSMLEG00000037560) BNIP2 (ENSMLEG00000043321) #27 ENSMLEG00000029597 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 281 ENSGT00910000148328 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00910000147762 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb.a #22 ENSGT00390000016228.o ENSGT00940000157461 #24 ENSGT00940000154384.h.b ENSGT00390000004985.b #25 Golden snub-nosed monkey MODERN SPECIES 1781 TEX9 (ENSRROG00000017857) #7 MNS1 (ENSRROG00000030941) #8 ZNF280D (ENSRROG00000045252) #9 TCF12 (ENSRROG00000038864) #10 CGNL1 (ENSRROG00000038869) #11 MYZAP (ENSRROG00000042851) #12 AQP9 (ENSRROG00000036711) #16 ALDH1A2 (ENSRROG00000038404) #15 LIPC (ENSRROG00000034862) #17 ADAM10 (ENSRROG00000040154) #18 MINDY2 (ENSRROG00000029314) #19 ENSRROG00000017628 SLTM (ENSRROG00000045301) #20 RNF111 (ENSRROG00000042594) #21 ENSRROG00000031107 #22 ENSRROG00000031519 MYO1E (ENSRROG00000033829) #24 ENSRROG00000041714 FAM81A (ENSRROG00000042062) #25 ENSRROG00000039634 GCNT3 (ENSRROG00000010325) #26 GTF2A2 (ENSRROG00000042120) BNIP2 (ENSRROG00000039446) #27 FOXB1 (ENSRROG00000002054) #28 ANXA2 (ENSRROG00000044822) #29 ICE2 (ENSRROG00000043475) #30 RORA (ENSRROG00000044355) #31 VPS13C (ENSRROG00000031121) #32 C2CD4B (ENSRROG00000040328) #34 ENSRROG00000038361 Black snub-nosed monkey MODERN SPECIES 128 ENSRBIG00000033708 TEX9 (ENSRBIG00000029670) #7 MNS1 (ENSRBIG00000040030) #8 ZNF280D (ENSRBIG00000044744) #9 TCF12 (ENSRBIG00000028241) #10 CGNL1 (ENSRBIG00000037972) #11 MYZAP (ENSRBIG00000039531) #12 AQP9 (ENSRBIG00000044874) #16 ALDH1A2 (ENSRBIG00000032417) #15 LIPC (ENSRBIG00000044876) #17 ADAM10 (ENSRBIG00000029485) #18 MINDY2 (ENSRBIG00000041728) #19 ENSRBIG00000017789 SLTM (ENSRBIG00000029226) #20 RNF111 (ENSRBIG00000044491) #21 ENSRBIG00000034154 #22 ENSRBIG00000037017 MYO1E (ENSRBIG00000011941) #24 ENSRBIG00000038080 FAM81A (ENSRBIG00000010649) #25 GTF2A2 (ENSRBIG00000043992) BNIP2 (ENSRBIG00000038818) #27 FOXB1 (ENSRBIG00000022907) #28 Rhinopithecus ANCESTRAL SPECIES ENSGT00940000155405.jb.b #22 Golden snub-nosed monkey MODERN SPECIES 774 ENSRROG00000029152 #22 Black snub-nosed monkey MODERN SPECIES 316 OTOGL (ENSRBIG00000041963) ENSRBIG00000036936 #22 PPP1R12A (ENSRBIG00000039895) PAWR (ENSRBIG00000029572) SYT1 (ENSRBIG00000027508) Hominoidea ANCESTRAL SPECIES 20 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000154355.e.b #14 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00680000100037.g.a.b.a.a ENSGT00910000148040 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 Hominidae ANCESTRAL SPECIES 22 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000154355.e.b #14 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 ENSGT00910000147045 ENSGT00940000154699 #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000154355.e.b #14 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a.e #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000163242.e #23 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00440000034918.r.i ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 ENSGT00910000147045 Gorilla MODERN SPECIES 6 TEX9 (ENSGGOG00000015030) #7 MNS1 (ENSGGOG00000004668) #8 ZNF280D (ENSGGOG00000006070) #9 TCF12 (ENSGGOG00000008166) #10 ENSGGOG00000040721 CGNL1 (ENSGGOG00000026524) #11 GCOM1 (ENSGGOG00000012125) #12 ALDH1A2 (ENSGGOG00000007661) #15 ENSGGOG00000040043 #14 AQP9 (ENSGGOG00000012151) #16 LIPC (ENSGGOG00000008125) #17 ADAM10 (ENSGGOG00000010649) #18 MINDY2 (ENSGGOG00000000256) #19 SLTM (ENSGGOG00000015866) #20 RNF111 (ENSGGOG00000017000) #21 CCNB2 (ENSGGOG00000007644) #22 MYO1E (ENSGGOG00000007653) #24 LDHAL6B (ENSGGOG00000022172) #23 ENSGGOG00000036165 ENSGGOG00000042225 ENSGGOG00000027194 FAM81A (ENSGGOG00000015899) #25 GCNT3 (ENSGGOG00000015222) #26 GTF2A2 (ENSGGOG00000024127) ENSGGOG00000005147 #27 ENSGGOG00000042348 ENSGGOG00000040675 FOXB1 (ENSGGOG00000024062) #28 ENSGGOG00000009738 #29 ICE2 (ENSGGOG00000022206) #30 ENSGGOG00000040146 Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000154355.e.b #14 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a.e #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000163242.e #23 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00440000034918.r.i ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.e.a #33 ENSGT00940000163765.e.b #34 ENSGT00910000147045 Human MODERN SPECIES 6 MNS1 (ENSG00000138587) #8 ZNF280D (ENSG00000137871) #9 ENSG00000285253 TCF12 (ENSG00000140262) #10 CGNL1 (ENSG00000128849) #11 MYZAP (ENSG00000263155) #12 GCOM1 (ENSG00000137878) POLR2M (ENSG00000255529) #13 ALDH1A2 (ENSG00000128918) #15 AQP9 (ENSG00000103569) #16 LIPC (ENSG00000166035) #17 ADAM10 (ENSG00000137845) #18 MINDY2 (ENSG00000128923) #19 RNF111 (ENSG00000157450) #21 SLTM (ENSG00000137776) #20 CCNB2 (ENSG00000157456) #22 MYO1E (ENSG00000157483) #24 LDHAL6B (ENSG00000171989) #23 FAM81A (ENSG00000157470) #25 GCNT3 (ENSG00000140297) #26 GTF2A2 (ENSG00000140307) BNIP2 (ENSG00000140299) #27 FOXB1 (ENSG00000171956) #28 ANXA2 (ENSG00000182718) #29 ICE2 (ENSG00000128915) #30 RORA (ENSG00000069667) #31 VPS13C (ENSG00000129003) #32 C2CD4A (ENSG00000198535) #33 C2CD4B (ENSG00000205502) #34 TLN2 (ENSG00000171914) #37 TPM1 (ENSG00000140416) Pan ANCESTRAL SPECIES 20 ENSGT00940000158889 #9 ENSGT00940000153147.m.a.b.i.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00390000017491.s.a.b.a ENSGT00950000183065.A #12 ENSGT00940000158898 #15 ENSGT00940000154355.e.b #14 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a.f #19 ENSGT00390000016607.a.e #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00940000163242.e #23 ENSGT00390000018706.m.b.b.l.a ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000167633 ENSGT00680000100037.g.a.b.a.a ENSGT00910000148040 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 Chimpanzee MODERN SPECIES 6 ZNF280D (ENSPTRG00000007107) #9 TCF12 (ENSPTRG00000007109) #10 ENSPTRG00000051354 CGNL1 (ENSPTRG00000007110) #11 ENSPTRG00000003397 ENSPTRG00000007112 #12 ALDH1A2 (ENSPTRG00000007113) #15 ENSPTRG00000045953 #14 AQP9 (ENSPTRG00000007114) #16 LIPC (ENSPTRG00000007115) #17 ADAM10 (ENSPTRG00000007116) #18 ENSPTRG00000040458 MINDY2 (ENSPTRG00000044903) #19 SLTM (ENSPTRG00000007121) #20 RNF111 (ENSPTRG00000007122) #21 CCNB2 (ENSPTRG00000007123) #22 MYO1E (ENSPTRG00000007124) #24 LDHAL6B (ENSPTRG00000007125) #23 ENSPTRG00000045531 FAM81A (ENSPTRG00000007127) #25 GCNT3 (ENSPTRG00000007128) #26 GTF2A2 (ENSPTRG00000007129) BNIP2 (ENSPTRG00000007130) #27 ENSPTRG00000049013 ENSPTRG00000047092 ENSPTRG00000048257 FOXB1 (ENSPTRG00000007131) #28 ANXA2 (ENSPTRG00000007132) #29 ENSPTRG00000042801 ICE2 (ENSPTRG00000007133) #30 RORA (ENSPTRG00000052707) #31 Bonobo MODERN SPECIES 6 ZNF280D (ENSPPAG00000034034) #9 TCF12 (ENSPPAG00000035109) #10 ENSPPAG00000040384 CGNL1 (ENSPPAG00000031337) #11 ENSPPAG00000044087 ENSPPAG00000006446 #12 ALDH1A2 (ENSPPAG00000033733) #15 ENSPPAG00000027982 #14 AQP9 (ENSPPAG00000043955) #16 LIPC (ENSPPAG00000000168) #17 ADAM10 (ENSPPAG00000040346) #18 ENSPPAG00000006779 MINDY2 (ENSPPAG00000040407) #19 SLTM (ENSPPAG00000029308) #20 RNF111 (ENSPPAG00000023370) #21 CCNB2 (ENSPPAG00000037736) #22 MYO1E (ENSPPAG00000042211) #24 LDHAL6B (ENSPPAG00000017634) #23 ENSPPAG00000042872 FAM81A (ENSPPAG00000034650) #25 GCNT3 (ENSPPAG00000006538) #26 GTF2A2 (ENSPPAG00000037230) ENSPPAG00000040483 #27 ENSPPAG00000036328 ENSPPAG00000004248 FOXB1 (ENSPPAG00000014279) #28 ANXA2 (ENSPPAG00000043943) #29 ICE2 (ENSPPAG00000004647) #30 RORA (ENSPPAG00000038168) #31 VPS13C (ENSPPAG00000029152) #32 ENSPPAG00000002371 Orangutan MODERN SPECIES 6 ENSPPYG00000035319 TEX9 (ENSPPYG00000006503) #7 MNS1 (ENSPPYG00000037143) #8 ZNF280D (ENSPPYG00000006504) #9 TCF12 (ENSPPYG00000006505) #10 CGNL1 (ENSPPYG00000006506) #11 MYZAP (ENSPPYG00000006507) #12 POLR2M (ENSPPYG00000032331) #13 ALDH1A2 (ENSPPYG00000006508) #15 AQP9 (ENSPPYG00000006510) #16 LIPC (ENSPPYG00000006511) #17 ADAM10 (ENSPPYG00000006512) #18 MINDY2 (ENSPPYG00000006514) #19 SLTM (ENSPPYG00000006515) #20 RNF111 (ENSPPYG00000006516) #21 CCNB2 (ENSPPYG00000006517) #22 MYO1E (ENSPPYG00000006518) #24 LDHAL6B (ENSPPYG00000006520) #23 FAM81A (ENSPPYG00000006521) #25 GTF2A2 (ENSPPYG00000006523) ENSPPYG00000006524 #27 FOXB1 (ENSPPYG00000006525) #28 ANXA2 (ENSPPYG00000006526) #29 ICE2 (ENSPPYG00000006527) #30 RORA (ENSPPYG00000006528) #31 VPS13C (ENSPPYG00000006529) #32 C2CD4A (ENSPPYG00000006530) #33 C2CD4B (ENSPPYG00000006531) #34 ENSPPYG00000033556 TLN2 (ENSPPYG00000006533) #37 TPM1 (ENSPPYG00000006534) Gibbon MODERN SPECIES 21 TUBGCP5 (ENSNLEG00000010987) CYFIP1 (ENSNLEG00000011085) NIPA2 (ENSNLEG00000035813) NIPA1 (ENSNLEG00000030666) ENSNLEG00000028832 ENSNLEG00000032090 ##35 ENSNLEG00000026899 #12 ALDH1A2 (ENSNLEG00000011260) #15 ENSNLEG00000028949 #14 AQP9 (ENSNLEG00000011318) #16 LIPC (ENSNLEG00000011332) #17 ADAM10 (ENSNLEG00000011378) #18 MINDY2 (ENSNLEG00000011420) #19 SLTM (ENSNLEG00000011440) #20 RNF111 (ENSNLEG00000011505) #21 CCNB2 (ENSNLEG00000011543) #22 MYO1E (ENSNLEG00000011582) #24 LDHAL6B (ENSNLEG00000018898) #23 FAM81A (ENSNLEG00000011636) #25 GCNT3 (ENSNLEG00000011644) #26 GTF2A2 (ENSNLEG00000030007) ENSNLEG00000011659 #27 ENSNLEG00000027282 ENSNLEG00000028766 FOXB1 (ENSNLEG00000011675) #28 ANXA2 (ENSNLEG00000011678) #29 ICE2 (ENSNLEG00000011832) #30 RORA (ENSNLEG00000011865) #31 VPS13C (ENSNLEG00000011894) #32 C2CD4A (ENSNLEG00000012098) #33 ENSNLEG00000031415 #34 Platyrrhini ANCESTRAL SPECIES 27 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.f ##33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 ENSGT00950000182891.a.a.a Cebidae ANCESTRAL SPECIES 29 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a ENSGT00940000155363 ENSGT00390000002049.c.b Cebidae_a ANCESTRAL SPECIES 39 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000163568.h ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.jb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.b #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00390000015930.w ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a ENSGT00940000155363 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 73 MNS1 (ENSSBOG00000022774) #8 ZNF280D (ENSSBOG00000000088) #9 ENSSBOG00000028904 TCF12 (ENSSBOG00000030977) #10 CGNL1 (ENSSBOG00000034321) #11 MYZAP (ENSSBOG00000034819) #12 POLR2M (ENSSBOG00000033956) #13 ALDH1A2 (ENSSBOG00000033307) #15 AQP9 (ENSSBOG00000033895) #16 LIPC (ENSSBOG00000025703) #17 ADAM10 (ENSSBOG00000032599) #18 MINDY2 (ENSSBOG00000020545) #19 ENSSBOG00000036232 SLTM (ENSSBOG00000018883) #20 RNF111 (ENSSBOG00000024466) #21 ENSSBOG00000032233 #22 MYO1E (ENSSBOG00000033519) #24 FAM81A (ENSSBOG00000036216) #25 GTF2A2 (ENSSBOG00000029949) BNIP2 (ENSSBOG00000020953) #27 ENSSBOG00000035928 FOXB1 (ENSSBOG00000004847) #28 ANXA2 (ENSSBOG00000019958) #29 ICE2 (ENSSBOG00000031514) #30 RORA (ENSSBOG00000018968) #31 VPS13C (ENSSBOG00000028193) #32 ENSSBOG00000020451 C2CD4A (ENSSBOG00000022275) #33 ENSSBOG00000024933 Bolivian squirrel monkey MODERN SPECIES 68 ENSSBOG00000020157 ENSSBOG00000021229 REELD1 (ENSSBOG00000016008) SLC10A7 (ENSSBOG00000026776) POU4F2 (ENSSBOG00000029758) TTC29 (ENSSBOG00000018366) EDNRA (ENSSBOG00000034230) ENSSBOG00000024941 PRMT9 (ENSSBOG00000030455) ARHGAP10 (ENSSBOG00000026002) NR3C2 (ENSSBOG00000020377) ENSSBOG00000023349 IQCM (ENSSBOG00000032471) DCLK2 (ENSSBOG00000032668) MAB21L2 (ENSSBOG00000013535) ENSSBOG00000032936 #22 ENSSBOG00000031656 ENSSBOG00000034372 LRBA (ENSSBOG00000032154) ENSSBOG00000023852 PRSS48 (ENSSBOG00000035708) SH3D19 (ENSSBOG00000029208) FHIP1A (ENSSBOG00000025309) GATB (ENSSBOG00000022495) ENSSBOG00000013483 FBXW7 (ENSSBOG00000028715) TMEM154 (ENSSBOG00000020640) TIGD4 (ENSSBOG00000019445) ENSSBOG00000034828 ARFIP1 (ENSSBOG00000029200) ENSSBOG00000022577 Capuchin MODERN SPECIES 74 TNFAIP8 (ENSCCAG00000031642) DMXL1 (ENSCCAG00000027240) ENSCCAG00000026798 ENSCCAG00000036816 DTWD2 (ENSCCAG00000035289) ENSCCAG00000034575 ALDH1A2 (ENSCCAG00000032827) #15 AQP9 (ENSCCAG00000028790) #16 LIPC (ENSCCAG00000000841) #17 ADAM10 (ENSCCAG00000037950) #18 ENSCCAG00000019132 MINDY2 (ENSCCAG00000027011) #19 ENSCCAG00000034613 SLTM (ENSCCAG00000022982) #20 RNF111 (ENSCCAG00000036251) #21 CCNB2 (ENSCCAG00000022599) #22 MYO1E (ENSCCAG00000037233) #24 FAM81A (ENSCCAG00000036641) #25 GTF2A2 (ENSCCAG00000027372) BNIP2 (ENSCCAG00000018887) #27 FOXB1 (ENSCCAG00000012040) #28 ENSCCAG00000033751 ENSCCAG00000018850 ENSCCAG00000022577 #29 ICE2 (ENSCCAG00000038126) #30 Marmoset MODERN SPECIES 1 MNS1 (ENSCJAG00000046558) #8 ZNF280D (ENSCJAG00000045928) #9 ENSCJAG00000079886 TCF12 (ENSCJAG00000043084) #10 CGNL1 (ENSCJAG00000040972) #11 POLR2M (ENSCJAG00000047453) #13 ALDH1A2 (ENSCJAG00000002282) #15 AQP9 (ENSCJAG00000085239) #16 LIPC (ENSCJAG00000080400) #17 ENSCJAG00000072076 ADAM10 (ENSCJAG00000020430) #18 MINDY2 (ENSCJAG00000020424) #19 ENSCJAG00000075320 SLTM (ENSCJAG00000020395) #20 RNF111 (ENSCJAG00000020373) #21 CCNB2 (ENSCJAG00000047995) #22 MYO1E (ENSCJAG00000001979) #24 LDHAL6B (ENSCJAG00000054541) #23 ENSCJAG00000073399 FAM81A (ENSCJAG00000044349) #25 GTF2A2 (ENSCJAG00000015225) GCNT3 (ENSCJAG00000022726) #26 ENSCJAG00000082299 ENSCJAG00000014722 #27 FOXB1 (ENSCJAG00000023331) #28 ENSCJAG00000082396 ANXA2 (ENSCJAG00000003888) #29 ICE2 (ENSCJAG00000003977) #30 RORA (ENSCJAG00000003989) #31 ENSCJAG00000083525 ENSCJAG00000077316 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1045 TEX9 (ENSANAG00000033184) #7 MNS1 (ENSANAG00000037519) #8 ZNF280D (ENSANAG00000036601) #9 ENSANAG00000025937 TCF12 (ENSANAG00000034734) #10 CGNL1 (ENSANAG00000009430) #11 MYZAP (ENSANAG00000037003) #12 POLR2M (ENSANAG00000023616) #13 AQP9 (ENSANAG00000025076) #16 ALDH1A2 (ENSANAG00000021292) #15 LIPC (ENSANAG00000032517) #17 ADAM10 (ENSANAG00000024000) #18 MINDY2 (ENSANAG00000028968) #19 SLTM (ENSANAG00000037031) #20 RNF111 (ENSANAG00000030291) #21 ENSANAG00000034564 #22 MYO1E (ENSANAG00000031231) #24 ENSANAG00000024145 FAM81A (ENSANAG00000030930) #25 ENSANAG00000033630 BNIP2 (ENSANAG00000036618) #27 FOXB1 (ENSANAG00000004930) #28 ENSANAG00000014778 ANXA2 (ENSANAG00000023201) #29 ICE2 (ENSANAG00000029936) #30 ENSANAG00000028963 RORA (ENSANAG00000024475) #31 ENSANAG00000035524 VPS13C (ENSANAG00000028331) #32 ENSANAG00000030627 ##33 TLN2 (ENSANAG00000038172) #37 Mas night monkey MODERN SPECIES 729 ENSANAG00000032384 ZNF572 (ENSANAG00000019228) MTSS1 (ENSANAG00000020239) ENSANAG00000029867 TATDN1 (ENSANAG00000032344) RNF139 (ENSANAG00000019348) TMEM65 (ENSANAG00000025471) FER1L6 (ENSANAG00000025928) FAM91A1 (ENSANAG00000032395) ANXA13 (ENSANAG00000025536) KLHL38 (ENSANAG00000020814) FBXO32 (ENSANAG00000034454) ENSANAG00000025283 NTAQ1 (ENSANAG00000027919) ATAD2 (ENSANAG00000021145) ENSANAG00000016355 #22 ZHX1 (ENSANAG00000019585) C8orf76 (ENSANAG00000021417) FAM83A (ENSANAG00000009236) TBC1D31 (ENSANAG00000029181) ENSANAG00000023748 DERL1 (ENSANAG00000032815) ZHX2 (ENSANAG00000015127) ENSANAG00000029823 ENSANAG00000030853 Simiiformes ANCESTRAL SPECIES ENSGT00940000155405.kb ##22 Catarrhini ANCESTRAL SPECIES 6 ENSGT00440000033807 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00850000133584 ENSGT00830000128380.q.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000010029 ENSGT00940000159188 ENSGT00910000147039 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00850000133584 ENSGT00830000128380.q.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.o ENSGT00940000154268.f.p.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029.u ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994.u ENSGT00390000002457 ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 Hominidae ANCESTRAL SPECIES 11 ENSGT00440000033807 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00850000133584 ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.o ENSGT00940000154268.f.p.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029.u ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00390000001994.u ENSGT00390000002457 ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000162732 ENSGT00940000159344 Homo/Pan/Gorilla group ANCESTRAL SPECIES 25 ENSGT00940000154018.b ENSGT00440000033807 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00850000133584 ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.o ENSGT00950000182883.a.b.a.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029.u ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT01060000248928.A.b Homo/Pan group ANCESTRAL SPECIES 24 ENSGT00940000154018.b ENSGT00440000033807 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00850000133584 ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.o ENSGT00950000182883.a.b.a.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029.u ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT01060000248928.A.b Pan ANCESTRAL SPECIES 25 ENSGT00940000159770 ENSGT00940000157123 ENSGT00940000154546 ENSGT00940000159083 ENSGT00850000133584 ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00940000154268.f.o ENSGT00950000183206.b.c.a.b.a.b.c.b ENSGT00940000162399.d ENSGT00950000182883.a.b.a.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029.u ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT01060000248928.A.b Chimpanzee MODERN SPECIES 20 ENSPTRG00000048701 SCIN (ENSPTRG00000018941) ENSPTRG00000051820 VWDE (ENSPTRG00000018938) TMEM106B (ENSPTRG00000018937) ENSPTRG00000052365 ENSPTRG00000051987 THSD7A (ENSPTRG00000018936) PHF14 (ENSPTRG00000018935) NDUFA4 (ENSPTRG00000048565) ENSPTRG00000043057 ENSPTRG00000046649 NXPH1 (ENSPTRG00000018932) ICA1 (ENSPTRG00000018931) GLCCI1 (ENSPTRG00000018929) ENSPTRG00000051825 ##22 UMAD1 (ENSPTRG00000051077) RPA3 (ENSPTRG00000018927) MIOS (ENSPTRG00000018926) COL28A1 (ENSPTRG00000034434) C1GALT1 (ENSPTRG00000048932) ENSPTRG00000047119 ENSPTRG00000049642 ENSPTRG00000046263 CCZ1 (ENSPTRG00000051931) ENSPTRG00000018921 PMS2 (ENSPTRG00000018902) AIMP2 (ENSPTRG00000018903) ANKRD61 (ENSPTRG00000018905) EIF2AK1 (ENSPTRG00000018904) USP42 (ENSPTRG00000018906) Bonobo MODERN SPECIES 20 ENSPPAG00000020570 DGKB (ENSPPAG00000036481) ETV1 (ENSPPAG00000017100) ENSPPAG00000022226 SCIN (ENSPPAG00000043890) ENSPPAG00000013831 ENSPPAG00000036870 TMEM106B (ENSPPAG00000030504) THSD7A (ENSPPAG00000028160) PHF14 (ENSPPAG00000041166) ENSPPAG00000037083 ENSPPAG00000035236 NXPH1 (ENSPPAG00000035580) ICA1 (ENSPPAG00000031312) ENSPPAG00000040691 ENSPPAG00000039829 ##22 UMAD1 (ENSPPAG00000030417) RPA3 (ENSPPAG00000037814) MIOS (ENSPPAG00000027157) COL28A1 (ENSPPAG00000011821) ENSPPAG00000010276 C1GALT1 (ENSPPAG00000029814) ENSPPAG00000033611 ENSPPAG00000038462 ENSPPAG00000008012 ENSPPAG00000038166 ENSPPAG00000033351 ZNF12 (ENSPPAG00000029109) ZNF853 (ENSPPAG00000036068) ENSPPAG00000027476 ENSPPAG00000018724 Gorilla MODERN SPECIES 20 ETV1 (ENSGGOG00000005918) ENSGGOG00000044019 ENSGGOG00000039058 SCIN (ENSGGOG00000015597) ENSGGOG00000036373 VWDE (ENSGGOG00000006434) TMEM106B (ENSGGOG00000040053) ENSGGOG00000036858 THSD7A (ENSGGOG00000008011) PHF14 (ENSGGOG00000006206) NDUFA4 (ENSGGOG00000001437) ENSGGOG00000041547 NXPH1 (ENSGGOG00000012360) ICA1 (ENSGGOG00000007090) ENSGGOG00000011819 ENSGGOG00000024483 ##22 UMAD1 (ENSGGOG00000008291) RPA3 (ENSGGOG00000022464) MIOS (ENSGGOG00000000652) COL28A1 (ENSGGOG00000010238) C1GALT1 (ENSGGOG00000036533) ENSGGOG00000037468 ENSGGOG00000036515 ENSGGOG00000002464 ENSGGOG00000043211 ENSGGOG00000036794 ZNF12 (ENSGGOG00000037007) ZNF316 (ENSGGOG00000040823) ZNF853 (ENSGGOG00000042292) INTS15 (ENSGGOG00000026416) GRID2IP (ENSGGOG00000008503) Gibbon MODERN SPECIES 1 DGKB (ENSNLEG00000016331) ETV1 (ENSNLEG00000016296) ARL4A (ENSNLEG00000016295) SCIN (ENSNLEG00000016265) ENSNLEG00000035206 ENSNLEG00000028754 VWDE (ENSNLEG00000016235) TMEM106B (ENSNLEG00000016225) THSD7A (ENSNLEG00000016197) PHF14 (ENSNLEG00000016184) ENSNLEG00000033241 ENSNLEG00000032207 NXPH1 (ENSNLEG00000016182) ICA1 (ENSNLEG00000016162) ENSNLEG00000016158 ENSNLEG00000035067 ##22 UMAD1 (ENSNLEG00000016155) RPA3 (ENSNLEG00000033298) MIOS (ENSNLEG00000016134) COL28A1 (ENSNLEG00000016093) C1GALT1 (ENSNLEG00000016087) ENSNLEG00000033587 ASNS (ENSNLEG00000016044) TAC1 (ENSNLEG00000016015) SDHAF3 (ENSNLEG00000016014) ENSNLEG00000016010 DLX6 (ENSNLEG00000016008) ENSNLEG00000032740 ENSNLEG00000016002 ENSNLEG00000015998 SLC25A13 (ENSNLEG00000015945) Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000159083 ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b ENSGT00850000133584 ENSGT00950000182767.b.b.d.hb.b.a.b.a.b ENSGT00830000128380.q.a.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000153375.lb.pb.a ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000010029 ENSGT00940000159188 ENSGT00910000147039 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000159083 ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b ENSGT00850000133584 ENSGT00950000182767.b.b.d.hb.b.a.b.a.b ENSGT00830000128380.q.a.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000153375.lb.pb.a ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00940000162732 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00940000154546.gb ENSGT00940000159083 ENSGT00850000133584 ENSGT00950000182767.b.b.d.hb.b.a.b.a.b ENSGT00830000128380.q.a.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000153375.lb.pb.a ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00910000148269 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000159083 ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b ENSGT00850000133584 ENSGT00950000182767.b.b.d.hb.b.a.b.a.b ENSGT00830000128380.q.a.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000153375.lb.pb.a ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00940000164236 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00940000154546.fb.a.b ENSGT00940000159083 ENSGT00850000133584 ENSGT00950000182767.b.b.d.hb.b.a.b.a.b ENSGT00830000128380.q.a.a ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000153375.lb.pb.a ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00940000164236 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000163409 ENSGT00390000002695 ENSGT00940000159344 Sooty mangabey MODERN SPECIES 185 ENSCATG00000044948 NXPH1 (ENSCATG00000037000) ICA1 (ENSCATG00000043201) GLCCI1 (ENSCATG00000044892) ENSCATG00000030314 ##22 UMAD1 (ENSCATG00000033366) RPA3 (ENSCATG00000028204) MIOS (ENSCATG00000011011) ENSCATG00000001666 COL28A1 (ENSCATG00000031059) C1GALT1 (ENSCATG00000030704) ENSCATG00000043335 ASNS (ENSCATG00000038317) TAC1 (ENSCATG00000034795) ENSCATG00000043998 ENSCATG00000032188 DLX5 (ENSCATG00000044853) DLX6 (ENSCATG00000036157) ENSCATG00000041545 ENSCATG00000014825 Macaca ANCESTRAL SPECIES 3 ENSGT00940000159083 ENSGT00850000133584 ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.a.a ENSGT01100000263477.F ENSGT00390000005569.x.a.a.b ENSGT00940000160835 ENSGT00940000158360 ENSGT00940000155427 ENSGT00940000156923 ENSGT00950000182901.a.a.b.b.a.b.a.a.a.b ENSGT00940000154268.f.k.a ENSGT00940000153095.g.b.a.a.a.b.a.a.b ENSGT00950000182883.a.b.a ENSGT00390000005530.a.b ENSGT00950000183046.b ENSGT00940000155405.kb ##22 ENSGT00390000003051 ENSGT00390000008029 ENSGT00390000015038 ENSGT00940000161647 ENSGT00940000155000.u ENSGT00760000119441.b ENSGT00390000001994 ENSGT00390000002457 ENSGT00390000008610.a.b.a.b ENSGT00510000046985.h.b.a.b ENSGT00390000010029 ENSGT00940000159188 ENSGT00940000157683 ENSGT00910000146930 ENSGT00940000162732 Pig-tailed macaque MODERN SPECIES 534 ENSMNEG00000042009 ENSMNEG00000044560 ENSMNEG00000017088 ENSMNEG00000026112 VWDE (ENSMNEG00000026368) TMEM106B (ENSMNEG00000030547) THSD7A (ENSMNEG00000044846) ENSMNEG00000033652 ENSMNEG00000041084 PHF14 (ENSMNEG00000031850) ENSMNEG00000030955 ENSMNEG00000029668 NXPH1 (ENSMNEG00000039744) ICA1 (ENSMNEG00000044278) GLCCI1 (ENSMNEG00000040369) ENSMNEG00000032658 ##22 UMAD1 (ENSMNEG00000044071) RPA3 (ENSMNEG00000044584) MIOS (ENSMNEG00000036023) COL28A1 (ENSMNEG00000035662) C1GALT1 (ENSMNEG00000029681) ENSMNEG00000031471 ASNS (ENSMNEG00000043217) TAC1 (ENSMNEG00000040665) ENSMNEG00000030799 ENSMNEG00000031425 DLX5 (ENSMNEG00000021136) DLX6 (ENSMNEG00000041272) ENSMNEG00000029391 ENSMNEG00000045375 ENSMNEG00000045345 Tarsier MODERN SPECIES 5046 ENSTSYG00000034109 MINDY2 (ENSTSYG00000000460) #19 SLTM (ENSTSYG00000013581) #20 RNF111 (ENSTSYG00000003352) #21 CCNB2 (ENSTSYG00000013818) #22 MYO1E (ENSTSYG00000007383) #24 FAM81A (ENSTSYG00000035068) #25 ENSTSYG00000027778 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Lemuriformes ANCESTRAL SPECIES 8 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Coquerels sifaka MODERN SPECIES 729 RFX7 (ENSPCOG00000018306) TEX9 (ENSPCOG00000010225) #7 MNS1 (ENSPCOG00000026806) #8 ZNF280D (ENSPCOG00000005546) #9 TCF12 (ENSPCOG00000018347) #10 CGNL1 (ENSPCOG00000027665) #11 MYZAP (ENSPCOG00000024273) #12 ENSPCOG00000024884 #13 ALDH1A2 (ENSPCOG00000025133) #15 AQP9 (ENSPCOG00000022893) #16 LIPC (ENSPCOG00000020000) #17 ADAM10 (ENSPCOG00000022185) #18 MINDY2 (ENSPCOG00000027791) #19 SLTM (ENSPCOG00000010624) #20 RNF111 (ENSPCOG00000025013) #21 CCNB2 (ENSPCOG00000023161) #22 MYO1E (ENSPCOG00000013210) #24 FAM81A (ENSPCOG00000008691) #25 ENSPCOG00000017610 BNIP2 (ENSPCOG00000013836) #27 FOXB1 (ENSPCOG00000006338) #28 ENSPCOG00000019595 ##29 ICE2 (ENSPCOG00000021818) #30 RORA (ENSPCOG00000023514) #31 Greater bamboo lemur MODERN SPECIES 100 AQP9 (ENSPSMG00000020531) #16 LIPC (ENSPSMG00000020516) #17 ADAM10 (ENSPSMG00000020455) #18 ENSPSMG00000020351 MINDY2 (ENSPSMG00000020335) #19 SLTM (ENSPSMG00000020294) #20 RNF111 (ENSPSMG00000020183) #21 CCNB2 (ENSPSMG00000020142) #22 MYO1E (ENSPSMG00000020103) #24 ENSPSMG00000020076 FAM81A (ENSPSMG00000020067) #25 GCNT3 (ENSPSMG00000020054) #26 GTF2A2 (ENSPSMG00000020045) BNIP2 (ENSPSMG00000020023) #27 FOXB1 (ENSPSMG00000019998) #28 ANXA2 (ENSPSMG00000019989) ##29 ICE2 (ENSPSMG00000019964) #30 RORA (ENSPSMG00000019899) #31 VPS13C (ENSPSMG00000019390) #32 ENSPSMG00000018733 #33 Mouse lemur MODERN SPECIES 22 TEX9 (ENSMICG00000028185) #7 MNS1 (ENSMICG00000002649) #8 ZNF280D (ENSMICG00000013140) #9 TCF12 (ENSMICG00000009110) #10 CGNL1 (ENSMICG00000002354) #11 MYZAP (ENSMICG00000012910) #12 POLR2M (ENSMICG00000047017) #13 AQP9 (ENSMICG00000038252) #16 ALDH1A2 (ENSMICG00000006105) #15 ENSMICG00000038169 LIPC (ENSMICG00000005871) #17 ADAM10 (ENSMICG00000005882) #18 MINDY2 (ENSMICG00000038206) #19 SLTM (ENSMICG00000013069) #20 RNF111 (ENSMICG00000036162) #21 CCNB2 (ENSMICG00000011608) #22 MYO1E (ENSMICG00000011619) #24 FAM81A (ENSMICG00000011130) #25 ENSMICG00000031559 BNIP2 (ENSMICG00000011145) #27 FOXB1 (ENSMICG00000017700) #28 ANXA2 (ENSMICG00000017701) ##29 ICE2 (ENSMICG00000043974) #30 RORA (ENSMICG00000010861) #31 VPS13C (ENSMICG00000015617) #32 ENSMICG00000042306 ENSMICG00000032839 #33 TLN2 (ENSMICG00000002620) #37 TPM1 (ENSMICG00000028096) LACTB (ENSMICG00000007103) ENSMICG00000007109 Bushbaby MODERN SPECIES 126 MNS1 (ENSOGAG00000001813) #8 ZNF280D (ENSOGAG00000001816) #9 TCF12 (ENSOGAG00000006485) #10 CGNL1 (ENSOGAG00000004011) #11 MYZAP (ENSOGAG00000004013) #12 POLR2M (ENSOGAG00000025752) #13 ALDH1A2 (ENSOGAG00000007796) #15 ENSOGAG00000031619 AQP9 (ENSOGAG00000000483) #16 ENSOGAG00000027328 LIPC (ENSOGAG00000033011) #17 ADAM10 (ENSOGAG00000004350) #18 ENSOGAG00000029975 #19 SLTM (ENSOGAG00000011297) #20 RNF111 (ENSOGAG00000009278) #21 CCNB2 (ENSOGAG00000012885) #22 MYO1E (ENSOGAG00000012887) #24 FAM81A (ENSOGAG00000012897) #25 GCNT3 (ENSOGAG00000014633) #26 GTF2A2 (ENSOGAG00000007061) BNIP2 (ENSOGAG00000007065) #27 FOXB1 (ENSOGAG00000007643) #28 ENSOGAG00000025065 ENSOGAG00000027159 ENSOGAG00000009952 ##29 ICE2 (ENSOGAG00000007354) #30 RORA (ENSOGAG00000007357) #31 VPS13C (ENSOGAG00000002114) #32 ENSOGAG00000028784 #33 ENSOGAG00000032289 #33 TLN2 (ENSOGAG00000016126) #37 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Tree shrew MODERN SPECIES 2806 RNF111 (ENSTBEG00000001600) #21 CCNB2 (ENSTBEG00000002739) #22 MYO1E (ENSTBEG00000003262) #24 ENSTBEG00000004904 Glires ANCESTRAL SPECIES 15 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Lagomorpha ANCESTRAL SPECIES 7 ENSGT00940000158905 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a ENSGT00940000155363 Rabbit MODERN SPECIES 8 ZNF280D (ENSOCUG00000015094) #9 ENSOCUG00000025662 ENSOCUG00000023894 TCF12 (ENSOCUG00000017812) #10 ENSOCUG00000036890 CGNL1 (ENSOCUG00000003637) #11 MYZAP (ENSOCUG00000002296) #12 POLR2M (ENSOCUG00000036974) #13 ALDH1A2 (ENSOCUG00000016942) #15 AQP9 (ENSOCUG00000009796) #16 LIPC (ENSOCUG00000001647) #17 ADAM10 (ENSOCUG00000016023) #18 ENSOCUG00000006171 #19 SLTM (ENSOCUG00000003327) #20 RNF111 (ENSOCUG00000003338) #21 CCNB2 (ENSOCUG00000001652) #22 MYO1E (ENSOCUG00000015835) #24 FAM81A (ENSOCUG00000005790) #25 GCNT3 (ENSOCUG00000006282) #26 GTF2A2 (ENSOCUG00000011347) BNIP2 (ENSOCUG00000006277) #27 ICE2 (ENSOCUG00000004153) #30 RORA (ENSOCUG00000012900) #31 VPS13C (ENSOCUG00000002801) #32 ENSOCUG00000010276 #33 ENSOCUG00000031516 ENSOCUG00000038392 TLN2 (ENSOCUG00000013064) #37 TPM1 (ENSOCUG00000014122) ENSOCUG00000030711 LACTB (ENSOCUG00000009995) Rodentia ANCESTRAL SPECIES 3 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Rodentia_B ANCESTRAL SPECIES 11 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Kangaroo rat MODERN SPECIES 330 Nedd4 (ENSDORG00000008857) Rfx7 (ENSDORG00000024632) ENSDORG00000004539 #7 Mns1 (ENSDORG00000004541) #8 Zfp280d (ENSDORG00000010891) #9 Tcf12 (ENSDORG00000007054) #10 Cgnl1 (ENSDORG00000026162) #11 Myzap (ENSDORG00000015312) #12 ENSDORG00000026281 Aldh1a2 (ENSDORG00000011893) #15 Aqp9 (ENSDORG00000007593) #16 Adam10 (ENSDORG00000007459) #18 Mindy2 (ENSDORG00000007461) #19 Sltm (ENSDORG00000007463) #20 Rnf111 (ENSDORG00000006942) #21 Ccnb2 (ENSDORG00000006944) #22 Myo1e (ENSDORG00000008506) #24 ENSDORG00000008945 #25 Gcnt3 (ENSDORG00000005165) #26 Gtf2a2 (ENSDORG00000007867) Bnip2 (ENSDORG00000009318) #27 ENSDORG00000029842 Foxb1 (ENSDORG00000027835) #28 ENSDORG00000024092 Anxa2 (ENSDORG00000015726) ##29 ENSDORG00000001443 #30 Rora (ENSDORG00000001826) #31 Vps13c (ENSDORG00000005969) #32 Tln2 (ENSDORG00000001561) #37 Tpm1 (ENSDORG00000002438) Lactb (ENSDORG00000028713) Myomorpha ANCESTRAL SPECIES 25 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Muroidea ANCESTRAL SPECIES 23 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Muroidea_A ANCESTRAL SPECIES 6 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Cricetidae ANCESTRAL SPECIES 4 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.c #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579.c #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Cricetinae ANCESTRAL SPECIES 6 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.c #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579.c #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00390000003710.c.a.b.a.b ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Chinese hamster chok1gshd MODERN SPECIES 284 Zfp280d (ENSCGRG00001015255) #9 Tcf12 (ENSCGRG00001017769) #10 Cgnl1 (ENSCGRG00001010637) #11 ENSCGRG00001020102 Myzap (ENSCGRG00001022094) #12 Polr2m (ENSCGRG00001022054) #13 Aldh1a2 (ENSCGRG00001024783) #15 Aqp9 (ENSCGRG00001002590) #16 Lipc (ENSCGRG00001023377) #17 ENSCGRG00001006102 #18 Adam10 (ENSCGRG00001024542) #18 Mindy2 (ENSCGRG00001009624) #19 ENSCGRG00001005799 Sltm (ENSCGRG00001022009) #20 Rnf111 (ENSCGRG00001012805) #21 Ccnb2 (ENSCGRG00001015914) #22 Myo1e (ENSCGRG00001015678) #24 Fam81a (ENSCGRG00001023777) #25 Gcnt3 (ENSCGRG00001010296) #26 ENSCGRG00001010848 Bnip2 (ENSCGRG00001022198) #27 Foxb1 (ENSCGRG00001010230) #28 ENSCGRG00001011336 Anxa2 (ENSCGRG00001011233) ##29 Ice2 (ENSCGRG00001014356) #30 Rora (ENSCGRG00001017588) #31 Vps13c (ENSCGRG00001011049) #32 C2cd4a (ENSCGRG00001012662) C2cd4b (ENSCGRG00001010530) Tln2 (ENSCGRG00001010300) #37 Tpm1 (ENSCGRG00001021042) Golden Hamster MODERN SPECIES 672 Cgnl1 (ENSMAUG00000021955) #11 Myzap (ENSMAUG00000022034) #12 Polr2m (ENSMAUG00000013480) #13 Aldh1a2 (ENSMAUG00000016151) #15 Aqp9 (ENSMAUG00000003309) #16 Lipc (ENSMAUG00000013594) #17 Adam10 (ENSMAUG00000014886) #18 Mindy2 (ENSMAUG00000022175) #19 Sltm (ENSMAUG00000014391) #20 Rnf111 (ENSMAUG00000012803) #21 Ccnb2 (ENSMAUG00000017817) #22 ENSMAUG00000008399 #24 ENSMAUG00000008961 #24 Fam81a (ENSMAUG00000020147) #25 Gcnt3 (ENSMAUG00000005994) #26 ENSMAUG00000018634 Bnip2 (ENSMAUG00000002456) #27 Foxb1 (ENSMAUG00000020300) #28 ENSMAUG00000008646 ENSMAUG00000004371 Anxa2 (ENSMAUG00000018332) ##29 Ice2 (ENSMAUG00000013954) #30 Rora (ENSMAUG00000018718) #31 Vps13c (ENSMAUG00000013205) #32 C2cd4a (ENSMAUG00000001316) C2cd4b (ENSMAUG00000011284) Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.c #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579.c #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Northern American deer mouse MODERN SPECIES 20 Mns1 (ENSPEMG00000022047) #8 Zfp280d (ENSPEMG00000020404) #9 Tcf12 (ENSPEMG00000016404) #10 Cgnl1 (ENSPEMG00000021122) #11 Myzap (ENSPEMG00000021267) #12 ENSPEMG00000029794 Polr2m (ENSPEMG00000027979) #13 Aldh1a2 (ENSPEMG00000017997) #15 Aqp9 (ENSPEMG00000020420) #16 Lipc (ENSPEMG00000021222) #17 Adam10 (ENSPEMG00000023786) #18 ENSPEMG00000028321 Mindy2 (ENSPEMG00000030187) #19 Sltm (ENSPEMG00000013263) #20 Rnf111 (ENSPEMG00000011827) #21 Ccnb2 (ENSPEMG00000010693) #22 Myo1e (ENSPEMG00000020628) #24 Fam81a (ENSPEMG00000020609) #25 ENSPEMG00000026494 Gcnt3 (ENSPEMG00000009036) #26 Gtf2a2 (ENSPEMG00000012295) Bnip2 (ENSPEMG00000008159) #27 Foxb1 (ENSPEMG00000026372) #28 Anxa2 (ENSPEMG00000020921) ##29 Ice2 (ENSPEMG00000023148) #30 Rora (ENSPEMG00000021178) #31 Vps13c (ENSPEMG00000016724) #32 C2cd4a (ENSPEMG00000013754) C2cd4b (ENSPEMG00000016908) ENSPEMG00000031152 Tln2 (ENSPEMG00000021042) #37 Prairie vole MODERN SPECIES 13 Rfx7 (ENSMOCG00000002168) Tex9 (ENSMOCG00000006358) #7 Mns1 (ENSMOCG00000012560) #8 Zfp280d (ENSMOCG00000022695) #9 Tcf12 (ENSMOCG00000022170) #10 Cgnl1 (ENSMOCG00000011190) #11 ENSMOCG00000021256 #12 ENSMOCG00000008322 Aldh1a2 (ENSMOCG00000015827) #15 Aqp9 (ENSMOCG00000019598) #16 Lipc (ENSMOCG00000021852) #17 Adam10 (ENSMOCG00000016984) #18 Mindy2 (ENSMOCG00000007504) #19 Sltm (ENSMOCG00000012419) #20 Rnf111 (ENSMOCG00000002746) #21 Ccnb2 (ENSMOCG00000014442) #22 Myo1e (ENSMOCG00000013989) #24 Fam81a (ENSMOCG00000021727) #25 Gcnt3 (ENSMOCG00000000478) #26 Gtf2a2 (ENSMOCG00000012789) Bnip2 (ENSMOCG00000021145) #27 Foxb1 (ENSMOCG00000003704) #28 Anxa2 (ENSMOCG00000003789) ##29 Ice2 (ENSMOCG00000000614) #30 Rora (ENSMOCG00000016886) #31 Vps13c (ENSMOCG00000000853) #32 C2cd4a (ENSMOCG00000002214) ENSMOCG00000002742 ENSMOCG00000012230 #37 ENSMOCG00000001381 #37 Tpm1 (ENSMOCG00000021399) Murinae ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Mus ANCESTRAL SPECIES 4 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Mus_A ANCESTRAL SPECIES 4 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Mus_B ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Mus_C ANCESTRAL SPECIES 8 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A.d.a #12 ENSGT00950000183065.A.d.b #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00520000062301 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.nd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.p ENSGT00940000162206.o ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Steppe mouse MODERN SPECIES 3341 Lipc (ENSMSIG00000024928) #17 Adam10 (ENSMSIG00000024905) #18 ENSMSIG00000024899 Mindy2 (ENSMSIG00000024872) #19 ENSMSIG00000024868 Sltm (ENSMSIG00000024797) #20 Rnf111 (ENSMSIG00000024613) #21 Ccnb2 (ENSMSIG00000024583) #22 Myo1e (ENSMSIG00000024480) #24 Fam81a (ENSMSIG00000024458) #25 Gcnt3 (ENSMSIG00000024447) #26 Gtf2a2 (ENSMSIG00000024440) Bnip2 (ENSMSIG00000024382) #27 Foxb1 (ENSMSIG00000024373) #28 ENSMSIG00000024362 ENSMSIG00000024328 ##29 Ice2 (ENSMSIG00000024296) #30 Rora (ENSMSIG00000024229) #31 Vps13c (ENSMSIG00000023921) #32 C2cd4a (ENSMSIG00000023906) C2cd4b (ENSMSIG00000023890) Tln2 (ENSMSIG00000023708) #37 ENSMSIG00000023676 spretus MODERN SPECIES 18 Mns1 (MGP_SPRETEiJ_G0033555) #8 Zfp280d (MGP_SPRETEiJ_G0033554) #9 Tcf12 (MGP_SPRETEiJ_G0033553) #10 Cgnl1 (MGP_SPRETEiJ_G0033552) #11 Myzap (MGP_SPRETEiJ_G0033551) #12 MGP_SPRETEiJ_G0033550 #12 MGP_SPRETEiJ_G0033549 #13 Aldh1a2 (MGP_SPRETEiJ_G0033548) #15 Aqp9 (MGP_SPRETEiJ_G0033547) #16 Lipc (MGP_SPRETEiJ_G0033546) #17 Adam10 (MGP_SPRETEiJ_G0033545) #18 MGP_SPRETEiJ_G0033544 Mindy2 (MGP_SPRETEiJ_G0033543) #19 Sltm (MGP_SPRETEiJ_G0033542) #20 Rnf111 (MGP_SPRETEiJ_G0033541) #21 Ccnb2 (MGP_SPRETEiJ_G0033540) #22 Myo1e (MGP_SPRETEiJ_G0033539) #24 Fam81a (MGP_SPRETEiJ_G0033538) #25 Gcnt3 (MGP_SPRETEiJ_G0033537) #26 Gtf2a2 (MGP_SPRETEiJ_G0033536) Bnip2 (MGP_SPRETEiJ_G0033535) #27 Foxb1 (MGP_SPRETEiJ_G0033534) #28 Anxa2 (MGP_SPRETEiJ_G0033533) ##29 Ice2 (MGP_SPRETEiJ_G0033532) #30 Rora (MGP_SPRETEiJ_G0033531) #31 Vps13c (MGP_SPRETEiJ_G0033530) #32 C2cd4a (MGP_SPRETEiJ_G0033529) MGP_SPRETEiJ_G0033528 Tln2 (MGP_SPRETEiJ_G0033527) #37 Tpm1 (MGP_SPRETEiJ_G0033526) Lactb (MGP_SPRETEiJ_G0033525) Mouse MODERN SPECIES 18 Rfx7 (ENSMUSG00000037674) Tex9 (ENSMUSG00000090626) #7 Mns1 (ENSMUSG00000032221) #8 Zfp280d (ENSMUSG00000038535) #9 Tcf12 (ENSMUSG00000032228) #10 Cgnl1 (ENSMUSG00000032232) #11 Myzap (ENSMUSG00000041361) #12 Polr2m (ENSMUSG00000032199) #13 Aldh1a2 (ENSMUSG00000013584) #15 Aqp9 (ENSMUSG00000032204) #16 Lipc (ENSMUSG00000032207) #17 Adam10 (ENSMUSG00000054693) #18 Mindy2 (ENSMUSG00000042444) #19 Sltm (ENSMUSG00000032212) #20 Rnf111 (ENSMUSG00000032217) #21 Ccnb2 (ENSMUSG00000032218) #22 Myo1e (ENSMUSG00000032220) #24 Fam81a (ENSMUSG00000032224) #25 Gcnt3 (ENSMUSG00000032226) #26 Gtf2a2 (ENSMUSG00000033543) Bnip2 (ENSMUSG00000011958) #27 Foxb1 (ENSMUSG00000059246) #28 Anxa2 (ENSMUSG00000032231) ##29 Ice2 (ENSMUSG00000032235) #30 Rora (ENSMUSG00000032238) #31 Vps13c (ENSMUSG00000035284) #32 C2cd4a (ENSMUSG00000047990) C2cd4b (ENSMUSG00000091956) Tln2 (ENSMUSG00000052698) #37 Tpm1 (ENSMUSG00000032366) Lactb (ENSMUSG00000032370) Ryukyu mouse MODERN SPECIES 18 Mns1 (MGP_CAROLIEiJ_G0032417) #8 Zfp280d (MGP_CAROLIEiJ_G0032416) #9 Tcf12 (MGP_CAROLIEiJ_G0032415) #10 Cgnl1 (MGP_CAROLIEiJ_G0032414) #11 Myzap (MGP_CAROLIEiJ_G0032413) #12 MGP_CAROLIEiJ_G0032412 #12 Polr2m (MGP_CAROLIEiJ_G0032411) #13 Aldh1a2 (MGP_CAROLIEiJ_G0032410) #15 Aqp9 (MGP_CAROLIEiJ_G0032409) #16 Lipc (MGP_CAROLIEiJ_G0032408) #17 Adam10 (MGP_CAROLIEiJ_G0032407) #18 MGP_CAROLIEiJ_G0032406 Mindy2 (MGP_CAROLIEiJ_G0032405) #19 Sltm (MGP_CAROLIEiJ_G0032404) #20 Rnf111 (MGP_CAROLIEiJ_G0032403) #21 Ccnb2 (MGP_CAROLIEiJ_G0032402) #22 Myo1e (MGP_CAROLIEiJ_G0032401) #24 Fam81a (MGP_CAROLIEiJ_G0032400) #25 Gcnt3 (MGP_CAROLIEiJ_G0032399) #26 Gtf2a2 (MGP_CAROLIEiJ_G0032398) Bnip2 (MGP_CAROLIEiJ_G0032397) #27 Foxb1 (MGP_CAROLIEiJ_G0032396) #28 Anxa2 (MGP_CAROLIEiJ_G0032395) ##29 Ice2 (MGP_CAROLIEiJ_G0032394) #30 Rora (MGP_CAROLIEiJ_G0032393) #31 Vps13c (MGP_CAROLIEiJ_G0032392) #32 C2cd4a (MGP_CAROLIEiJ_G0032391) C2cd4b (MGP_CAROLIEiJ_G0032390) Tln2 (MGP_CAROLIEiJ_G0032389) #37 Tpm1 (MGP_CAROLIEiJ_G0032388) Lactb (MGP_CAROLIEiJ_G0032387) Shrew mouse MODERN SPECIES 1 Mns1 (MGP_PahariEiJ_G0015281) #8 Zfp280d (MGP_PahariEiJ_G0015280) #9 Tcf12 (MGP_PahariEiJ_G0015279) #10 Cgnl1 (MGP_PahariEiJ_G0015278) #11 Myzap (MGP_PahariEiJ_G0015277) #12 MGP_PahariEiJ_G0015276 #12 Polr2m (MGP_PahariEiJ_G0015275) #13 Aldh1a2 (MGP_PahariEiJ_G0015274) #15 MGP_PahariEiJ_G0015273 #16 Lipc (MGP_PahariEiJ_G0015272) #17 Adam10 (MGP_PahariEiJ_G0015271) #18 MGP_PahariEiJ_G0015270 Mindy2 (MGP_PahariEiJ_G0015269) #19 Sltm (MGP_PahariEiJ_G0015268) #20 Rnf111 (MGP_PahariEiJ_G0015267) #21 Ccnb2 (MGP_PahariEiJ_G0015266) #22 Myo1e (MGP_PahariEiJ_G0015265) #24 Fam81a (MGP_PahariEiJ_G0015264) #25 Gcnt3 (MGP_PahariEiJ_G0015263) #26 Gtf2a2 (MGP_PahariEiJ_G0015262) Bnip2 (MGP_PahariEiJ_G0015261) #27 Foxb1 (MGP_PahariEiJ_G0015260) #28 Anxa2 (MGP_PahariEiJ_G0015259) ##29 Ice2 (MGP_PahariEiJ_G0015258) #30 Rora (MGP_PahariEiJ_G0015257) #31 Vps13c (MGP_PahariEiJ_G0015256) #32 C2cd4a (MGP_PahariEiJ_G0015255) C2cd4b (MGP_PahariEiJ_G0015254) Tln2 (MGP_PahariEiJ_G0015253) #37 MGP_PahariEiJ_G0015252 Lactb (MGP_PahariEiJ_G0015251) Rat DUPLICATION Rat MODERN SPECIES Taar7d (ENSRNOG00000068797) Taar7e (ENSRNOG00000064447) Taar7h (ENSRNOG00000063959) ENSRNOG00000067484 Taar8a (ENSRNOG00000070320) Taar8c (ENSRNOG00000062917) Taar9 (ENSRNOG00000026096) LOC108349831 (ENSRNOG00000068524) Stx7 (ENSRNOG00000015670) Moxd1 (ENSRNOG00000015321) Ccn2 (ENSRNOG00000015036) Enpp1 (ENSRNOG00000013994) Enpp3 (ENSRNOG00000013791) Med23 (ENSRNOG00000013422) Arg1 (ENSRNOG00000013304) Ccnb2-ps2 (ENSRNOG00000055111) #22 Akap7 (ENSRNOG00000013202) Epb41l2 (ENSRNOG00000012346) ENSRNOG00000067501 Hmgb2-ps6 (ENSRNOG00000026462) Tmem200a (ENSRNOG00000047783) LOC100360791 (ENSRNOG00000033517) Samd3 (ENSRNOG00000039955) L3mbtl3 (ENSRNOG00000011720) AABR07004232.1 (ENSRNOG00000048904) LOC120097699 (ENSRNOG00000063903) Arhgap18 (ENSRNOG00000011245) AABR07000583.1 (ENSRNOG00000046438) Lama2 (ENSRNOG00000011134) ENSRNOG00000069014 Ptprk (ENSRNOG00000047605) Rat MODERN SPECIES 18 ENSRNOG00000070052 Zfp280d (ENSRNOG00000055631) #9 Tcf12 (ENSRNOG00000057754) #10 Cgnl1 (ENSRNOG00000054080) #11 Polr2m (ENSRNOG00000057676) #12 Aldh1a2 (ENSRNOG00000055049) #15 Aqp9 (ENSRNOG00000061883) #16 ENSRNOG00000070532 AABR07038881.1 (ENSRNOG00000038181) Lipc (ENSRNOG00000060338) #17 Adam10 (ENSRNOG00000054257) #18 AABR07070609.1 (ENSRNOG00000061240) Mindy2 (ENSRNOG00000061337) #19 Sltm (ENSRNOG00000054446) #20 Rnf111 (ENSRNOG00000060750) #21 Ccnb2 (ENSRNOG00000063216) #22 ENSRNOG00000071086 Myo1e (ENSRNOG00000061928) #24 Fam81a (ENSRNOG00000057501) #25 Gcnt3 (ENSRNOG00000059540) #26 LOC103695118 (ENSRNOG00000056701) Bnip2 (ENSRNOG00000056024) #27 Foxb1 (ENSRNOG00000068150) Anxa2 (ENSRNOG00000010362) ##29 Ice2 (ENSRNOG00000010160) #30 Rora (ENSRNOG00000027145) #31 Vps13c (ENSRNOG00000030213) #32 C2cd4a (ENSRNOG00000034236) C2cd4b (ENSRNOG00000065921) Tln2 (ENSRNOG00000018373) #37 Tpm1 (ENSRNOG00000018184) Upper Galilee mountains blind mole rat MODERN SPECIES 972 Lipc (ENSNGAG00000010841) #17 Adam10 (ENSNGAG00000014635) #18 Mindy2 (ENSNGAG00000003074) #19 Sltm (ENSNGAG00000012328) #20 Rnf111 (ENSNGAG00000002795) #21 Ccnb2 (ENSNGAG00000009381) #22 Myo1e (ENSNGAG00000000794) #24 ENSNGAG00000002054 #25 Gcnt3 (ENSNGAG00000016220) #26 ENSNGAG00000006170 Bnip2 (ENSNGAG00000013361) #27 Foxb1 (ENSNGAG00000019195) #28 Anxa2 (ENSNGAG00000019852) ##29 Ice2 (ENSNGAG00000000786) #30 Rora (ENSNGAG00000001226) #31 Lesser Egyptian jerboa MODERN SPECIES 92 Nedd4 (ENSJJAG00000023014) Rfx7 (ENSJJAG00000004499) ENSJJAG00000008835 #7 Mns1 (ENSJJAG00000006548) #8 Zfp280d (ENSJJAG00000010802) #9 Tcf12 (ENSJJAG00000014280) #10 Cgnl1 (ENSJJAG00000002516) #11 Myzap (ENSJJAG00000003683) #12 Aldh1a2 (ENSJJAG00000019176) #15 Aqp9 (ENSJJAG00000003289) #16 Lipc (ENSJJAG00000016366) #17 Adam10 (ENSJJAG00000020483) #18 Mindy2 (ENSJJAG00000015879) #19 Sltm (ENSJJAG00000006970) #20 Rnf111 (ENSJJAG00000013647) #21 Ccnb2 (ENSJJAG00000022154) #22 Myo1e (ENSJJAG00000010416) #24 Fam81a (ENSJJAG00000021870) #25 ENSJJAG00000016236 Bnip2 (ENSJJAG00000012193) #27 Foxb1 (ENSJJAG00000010310) #28 Anxa2 (ENSJJAG00000008193) ##29 ENSJJAG00000019838 #30 Rora (ENSJJAG00000018794) #31 Vps13c (ENSJJAG00000012718) #32 Tln2 (ENSJJAG00000016766) #37 Tpm1 (ENSJJAG00000022370) Lactb (ENSJJAG00000009980) ENSJJAG00000021616 Rab8b (ENSJJAG00000016477) ENSJJAG00000018987 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Sciuridae ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.g #33 ENSGT00940000163765.h #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 11 TEX9 (ENSSVLG00005009884) #7 MNS1 (ENSSVLG00005010076) #8 ZNF280D (ENSSVLG00005010148) #9 TCF12 (ENSSVLG00005010240) #10 CGNL1 (ENSSVLG00005010468) #11 MYZAP (ENSSVLG00005010520) #12 ENSSVLG00005010581 #13 ALDH1A2 (ENSSVLG00005010692) #15 AQP9 (ENSSVLG00005011049) #16 LIPC (ENSSVLG00005011202) #17 ENSSVLG00005011609 #18 MINDY2 (ENSSVLG00005011765) #19 ENSSVLG00005011970 SLTM (ENSSVLG00005012027) #20 RNF111 (ENSSVLG00005012286) #21 ENSSVLG00005012381 #22 MYO1E (ENSSVLG00005012637) #24 FAM81A (ENSSVLG00005012717) #25 ENSSVLG00005012768 GCNT3 (ENSSVLG00005012791) #26 GTF2A2 (ENSSVLG00005012828) BNIP2 (ENSSVLG00005012971) #27 FOXB1 (ENSSVLG00005013050) #28 ENSSVLG00005013204 ##29 ICE2 (ENSSVLG00005013300) #30 RORA (ENSSVLG00005013514) #31 VPS13C (ENSSVLG00005014425) #32 ENSSVLG00005017686 #33 ENSSVLG00005017744 #33 TLN2 (ENSSVLG00005017833) #37 TPM1 (ENSSVLG00005018158) Eurasian red squirrel MODERN SPECIES 2 OR52N4 (ENSSVLG00005008147) ENSSVLG00005008162 ENSSVLG00005008174 ENSSVLG00005008186 ENSSVLG00005008212 ENSSVLG00005008237 ENSSVLG00005008274 ENSSVLG00005008286 OR52P1 (ENSSVLG00005008317) ENSSVLG00005008332 ENSSVLG00005008341 ENSSVLG00005008355 TRIM5 (ENSSVLG00005004894) ENSSVLG00005005152 TRIM34 (ENSSVLG00005005182) ENSSVLG00005005208 #22 TRIM6 (ENSSVLG00005005234) OR52B6 (ENSSVLG00005005287) ENSSVLG00005005301 OR52H1 (ENSSVLG00005005309) ENSSVLG00005005326 UBQLNL (ENSSVLG00005005398) UBQLN3 (ENSSVLG00005005427) ENSSVLG00005005439 ENSSVLG00005005452 ENSSVLG00005005482 ENSSVLG00005005502 ENSSVLG00005005517 ENSSVLG00005005539 ENSSVLG00005005551 ENSSVLG00005005572 Eurasian red squirrel MODERN SPECIES 13 WAPL (ENSSVLG00005003658) OPN4 (ENSSVLG00005003591) LDB3 (ENSSVLG00005003371) ENSSVLG00005003290 BMPR1A (ENSSVLG00005003269) MMRN2 (ENSSVLG00005003238) SNCG (ENSSVLG00005003209) ADIRF (ENSSVLG00005003188) ENSSVLG00005003177 ENSSVLG00005003158 ENSSVLG00005003124 ENSSVLG00005003056 ENSSVLG00005003008 GPRIN2 (ENSSVLG00005002992) ENSSVLG00005002980 ENSSVLG00005002964 #22 CH25H (ENSSVLG00005002954) ENSSVLG00005002938 LIPA (ENSSVLG00005002910) ENSSVLG00005002898 IFIT2 (ENSSVLG00005002885) ENSSVLG00005002871 ENSSVLG00005002858 ENSSVLG00005002836 ENSSVLG00005002818 ENSSVLG00005002790 ENSSVLG00005002769 IFIT5 (ENSSVLG00005002741) SLC16A12 (ENSSVLG00005002727) PANK1 (ENSSVLG00005002658) KIF20B (ENSSVLG00005002566) Marmotini ANCESTRAL SPECIES 9 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.g #33 ENSGT00940000163765.h #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES 4 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.pb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765.g #33 ENSGT00940000163765.h #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Arctic ground squirrel MODERN SPECIES 33 MNS1 (ENSUPAG00010019137) #8 ZNF280D (ENSUPAG00010019149) #9 ENSUPAG00010019221 TCF12 (ENSUPAG00010019230) #10 ENSUPAG00010019275 CGNL1 (ENSUPAG00010019308) #11 MYZAP (ENSUPAG00010019369) #12 POLR2M (ENSUPAG00010019395) #13 ALDH1A2 (ENSUPAG00010019398) #15 AQP9 (ENSUPAG00010019410) #16 LIPC (ENSUPAG00010019417) #17 ADAM10 (ENSUPAG00010019425) #18 MINDY2 (ENSUPAG00010019437) #19 SLTM (ENSUPAG00010019462) #20 RNF111 (ENSUPAG00010019547) #21 ENSUPAG00010019571 #22 MYO1E (ENSUPAG00010019578) #24 FAM81A (ENSUPAG00010019613) #25 GCNT3 (ENSUPAG00010019625) #26 GTF2A2 (ENSUPAG00010019628) BNIP2 (ENSUPAG00010019641) #27 FOXB1 (ENSUPAG00010019648) #28 ENSUPAG00010019652 ##29 ICE2 (ENSUPAG00010019658) #30 RORA (ENSUPAG00010019675) #31 VPS13C (ENSUPAG00010019706) #32 ENSUPAG00010019880 #33 ENSUPAG00010019882 #33 TLN2 (ENSUPAG00010019892) #37 TPM1 (ENSUPAG00010020041) LACTB (ENSUPAG00010020113) Squirrel MODERN SPECIES 71 TEX9 (ENSSTOG00000003051) #7 MNS1 (ENSSTOG00000006850) #8 ZNF280D (ENSSTOG00000003775) #9 ENSSTOG00000001523 #10 CGNL1 (ENSSTOG00000015855) #11 MYZAP (ENSSTOG00000027285) #12 POLR2M (ENSSTOG00000026874) #13 ALDH1A2 (ENSSTOG00000000292) #15 AQP9 (ENSSTOG00000014131) #16 LIPC (ENSSTOG00000000547) #17 ADAM10 (ENSSTOG00000000561) #18 MINDY2 (ENSSTOG00000000569) #19 ENSSTOG00000030471 SLTM (ENSSTOG00000000584) #20 RNF111 (ENSSTOG00000001267) #21 ENSSTOG00000001275 #22 MYO1E (ENSSTOG00000001282) #24 FAM81A (ENSSTOG00000005017) #25 GCNT3 (ENSSTOG00000004004) #26 GTF2A2 (ENSSTOG00000004010) BNIP2 (ENSSTOG00000020930) #27 FOXB1 (ENSSTOG00000020458) #28 ENSSTOG00000023376 ##29 ENSSTOG00000032826 #30 RORA (ENSSTOG00000012400) #31 VPS13C (ENSSTOG00000003166) #32 ENSSTOG00000003290 #33 TLN2 (ENSSTOG00000014824) #37 TPM1 (ENSSTOG00000009955) LACTB (ENSSTOG00000009971) RPS27L (ENSSTOG00000014532) Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000155187.B ENSGT00390000015984 ENSGT00940000158117 ENSGT00940000159194 ENSGT00390000002661.b.w ENSGT00390000011922 ENSGT00530000063880.b ENSGT01100000263484.B.b.b ENSGT00390000007776 ENSGT00390000011748 ENSGT00940000157594 ENSGT00390000004040.b ENSGT00520000055634.a ENSGT00940000159740 ENSGT00940000155549.b ENSGT00940000155405.qb #22 ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000154655.a ENSGT01070000253911 ENSGT00390000007815 ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321 ENSGT00390000008161.a.b ENSGT00940000155167.b.b ENSGT00940000159374 ENSGT00940000159514 ENSGT00940000159963 ENSGT00940000155778.A Squirrel MODERN SPECIES 70 ABRA (ENSSTOG00000011664) ANGPT1 (ENSSTOG00000008023) RSPO2 (ENSSTOG00000021427) EIF3E (ENSSTOG00000008976) EMC2 (ENSSTOG00000007594) TMEM74 (ENSSTOG00000001096) TRHR (ENSSTOG00000015264) NUDCD1 (ENSSTOG00000015266) ENY2 (ENSSTOG00000027768) PKHD1L1 (ENSSTOG00000015273) EBAG9 (ENSSTOG00000015326) SYBU (ENSSTOG00000015331) KCNV1 (ENSSTOG00000020827) ENSSTOG00000031426 CSMD3 (ENSSTOG00000013255) ENSSTOG00000032777 #22 TRPS1 (ENSSTOG00000026496) EIF3H (ENSSTOG00000001403) UTP23 (ENSSTOG00000001411) RAD21 (ENSSTOG00000014316) AARD (ENSSTOG00000030141) SLC30A8 (ENSSTOG00000010500) MED30 (ENSSTOG00000000638) EXT1 (ENSSTOG00000015593) SAMD12 (ENSSTOG00000021964) TNFRSF11B (ENSSTOG00000009482) COLEC10 (ENSSTOG00000001872) MAL2 (ENSSTOG00000010053) CCN3 (ENSSTOG00000010067) ENPP2 (ENSSTOG00000001935) TAF2 (ENSSTOG00000013027) Arctic ground squirrel MODERN SPECIES 30 ABRA (ENSUPAG00010014421) ANGPT1 (ENSUPAG00010014401) RSPO2 (ENSUPAG00010014385) EIF3E (ENSUPAG00010014351) EMC2 (ENSUPAG00010014324) TMEM74 (ENSUPAG00010014313) TRHR (ENSUPAG00010014305) NUDCD1 (ENSUPAG00010014294) ENY2 (ENSUPAG00010014269) PKHD1L1 (ENSUPAG00010014083) EBAG9 (ENSUPAG00010014065) SYBU (ENSUPAG00010014018) ENSUPAG00010014010 KCNV1 (ENSUPAG00010014000) CSMD3 (ENSUPAG00010013720) ENSUPAG00010013682 #22 Alpin marmot MODERN SPECIES 7 MNS1 (ENSMMMG00000015043) #8 ZNF280D (ENSMMMG00000014982) #9 ENSMMMG00000014979 TCF12 (ENSMMMG00000014657) #10 CGNL1 (ENSMMMG00000014543) #11 MYZAP (ENSMMMG00000014508) #12 POLR2M (ENSMMMG00000014496) #13 ALDH1A2 (ENSMMMG00000014471) #15 AQP9 (ENSMMMG00000014447) #16 LIPC (ENSMMMG00000014432) #17 ADAM10 (ENSMMMG00000014417) #18 ENSMMMG00000014410 MINDY2 (ENSMMMG00000014393) #19 SLTM (ENSMMMG00000011563) #20 RNF111 (ENSMMMG00000011515) #21 CCNB2 (ENSMMMG00000011506) #22 MYO1E (ENSMMMG00000011477) #24 ENSMMMG00000011444 FAM81A (ENSMMMG00000011428) #25 GCNT3 (ENSMMMG00000011425) #26 GTF2A2 (ENSMMMG00000011388) BNIP2 (ENSMMMG00000011312) #27 FOXB1 (ENSMMMG00000011291) #28 ENSMMMG00000011269 ##29 ENSMMMG00000011237 #30 ENSMMMG00000011212 #30 RORA (ENSMMMG00000011194) #31 VPS13C (ENSMMMG00000011042) #32 ENSMMMG00000011035 #33 ENSMMMG00000011024 #33 ENSMMMG00000011016 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.dd ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.i.a ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a ENSGT00940000155363 Long-tailed chinchilla MODERN SPECIES 157 TEX9 (ENSCLAG00000010721) #7 MNS1 (ENSCLAG00000009111) #8 ENSCLAG00000008975 ZNF280D (ENSCLAG00000010749) #9 TCF12 (ENSCLAG00000009457) #10 CGNL1 (ENSCLAG00000007046) #11 MYZAP (ENSCLAG00000006426) #12 POLR2M (ENSCLAG00000006251) #13 ALDH1A2 (ENSCLAG00000008024) #15 AQP9 (ENSCLAG00000007276) #16 LIPC (ENSCLAG00000009019) #17 ADAM10 (ENSCLAG00000008259) #18 MINDY2 (ENSCLAG00000007672) #19 SLTM (ENSCLAG00000007160) #20 RNF111 (ENSCLAG00000008225) #21 CCNB2 (ENSCLAG00000008353) #22 MYO1E (ENSCLAG00000008802) #24 FAM81A (ENSCLAG00000008454) #25 GCNT3 (ENSCLAG00000017684) #26 ENSCLAG00000007616 BNIP2 (ENSCLAG00000010658) #27 FOXB1 (ENSCLAG00000009811) #28 ENSCLAG00000007067 ##29 ENSCLAG00000008269 #30 ENSCLAG00000012071 #30 RORA (ENSCLAG00000012113) #31 VPS13C (ENSCLAG00000006472) #32 ENSCLAG00000016591 TLN2 (ENSCLAG00000009840) #37 TPM1 (ENSCLAG00000008921) LACTB (ENSCLAG00000007519) Degu MODERN SPECIES 67 ZNF280D (ENSODEG00000017105) #9 ENSODEG00000017238 ENSODEG00000017113 ENSODEG00000017233 #10 ENSODEG00000017285 #10 CGNL1 (ENSODEG00000017187) #11 ENSODEG00000020457 MYZAP (ENSODEG00000017200) #12 ALDH1A2 (ENSODEG00000017335) #15 AQP9 (ENSODEG00000016950) #16 LIPC (ENSODEG00000017170) #17 ADAM10 (ENSODEG00000017007) #18 MINDY2 (ENSODEG00000017214) #19 SLTM (ENSODEG00000017077) #20 RNF111 (ENSODEG00000017237) #21 CCNB2 (ENSODEG00000016886) #22 ENSODEG00000017886 MYO1E (ENSODEG00000016979) #24 ENSODEG00000016827 #25 ENSODEG00000017154 ENSODEG00000017110 #27 FOXB1 (ENSODEG00000016892) #28 ENSODEG00000017529 ##29 ICE2 (ENSODEG00000017266) #30 RORA (ENSODEG00000016932) #31 VPS13C (ENSODEG00000017192) #32 ENSODEG00000020499 ENSODEG00000016956 TLN2 (ENSODEG00000016531) #37 TPM1 (ENSODEG00000017042) LACTB (ENSODEG00000016877) Guinea pig MODERN SPECIES 101 MEGF11 (ENSCPOG00000006468) RAB11A (ENSCPOG00000037599) DENND4A (ENSCPOG00000013602) SLC24A1 (ENSCPOG00000013596) INTS14 (ENSCPOG00000000764) HACD3 (ENSCPOG00000013593) DPP8 (ENSCPOG00000014124) IGDCC4 (ENSCPOG00000004519) IGDCC3 (ENSCPOG00000006751) PARP16 (ENSCPOG00000025232) CILP (ENSCPOG00000036223) CLPX (ENSCPOG00000003391) MINDY2 (ENSCPOG00000002287) #19 SLTM (ENSCPOG00000026109) #20 RNF111 (ENSCPOG00000010550) #21 CCNB2 (ENSCPOG00000026977) #22 MYO1E (ENSCPOG00000002570) #24 FAM81A (ENSCPOG00000015628) #25 GCNT3 (ENSCPOG00000022353) #26 GTF2A2 (ENSCPOG00000035441) BNIP2 (ENSCPOG00000004962) #27 FOXB1 (ENSCPOG00000020128) #28 ENSCPOG00000006400 ##29 ICE2 (ENSCPOG00000008486) #30 RORA (ENSCPOG00000008494) #31 VPS13C (ENSCPOG00000000102) #32 Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000010333 #9 ENSHGLG00000038848 #10 ENSHGLG00000017862 #10 CGNL1 (ENSHGLG00000014971) #11 ENSHGLG00000032585 MYZAP (ENSHGLG00000012877) #12 ENSHGLG00000011124 #13 ALDH1A2 (ENSHGLG00000006822) #15 AQP9 (ENSHGLG00000040651) #16 LIPC (ENSHGLG00000017247) #17 ENSHGLG00000042059 ADAM10 (ENSHGLG00000008761) #18 MINDY2 (ENSHGLG00000005567) #19 ENSHGLG00000018512 #20 RNF111 (ENSHGLG00000017832) #21 ENSHGLG00000015169 #22 MYO1E (ENSHGLG00000015124) #24 ENSHGLG00000042902 FAM81A (ENSHGLG00000013990) #25 GCNT3 (ENSHGLG00000048945) #26 GTF2A2 (ENSHGLG00000037685) ENSHGLG00000045803 ENSHGLG00000006545 #27 FOXB1 (ENSHGLG00000018464) #28 ENSHGLG00000038903 ENSHGLG00000008172 ##29 NARG2 (ENSHGLG00000041744) #30 RORA (ENSHGLG00000010547) #31 ENSHGLG00000005786 #32 ENSHGLG00000048789 ENSHGLG00000032199 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00910000147045 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00930000152855 ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 Suina ANCESTRAL SPECIES 12 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00930000152855 ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 Pig MODERN SPECIES TCF12 (ENSSSCG00000004600) #10 CGNL1 (ENSSSCG00000035038) #11 MYZAP (ENSSSCG00000004598) #12 POLR2M (ENSSSCG00000030605) #13 ALDH1A2 (ENSSSCG00000025578) #15 ENSSSCG00000046774 AQP9 (ENSSSCG00000004597) #16 ENSSSCG00000055556 LIPC (ENSSSCG00000004596) #17 ENSSSCG00000024660 ADAM10 (ENSSSCG00000004595) #18 MINDY2 (ENSSSCG00000024131) #19 ENSSSCG00000034769 SLTM (ENSSSCG00000004592) #20 RNF111 (ENSSSCG00000004589) #21 CCNB2 (ENSSSCG00000004588) #22 MYO1E (ENSSSCG00000004587) #24 FAM81A (ENSSSCG00000004586) #25 ENSSSCG00000063018 GCNT3 (ENSSSCG00000004584) #26 ENSSSCG00000004583 BNIP2 (ENSSSCG00000004582) #27 FOXB1 (ENSSSCG00000035244) #28 ENSSSCG00000048426 ANXA2 (ENSSSCG00000004578) ##29 ICE2 (ENSSSCG00000004577) #30 RORA (ENSSSCG00000004576) #31 VPS13C (ENSSSCG00000036431) #32 ENSSSCG00000004573 ENSSSCG00000035016 ENSSSCG00000004572 Chacoan peccary MODERN SPECIES 190 ALDH1A2 (ENSCWAG00000007109) #15 AQP9 (ENSCWAG00000007410) #16 LIPC (ENSCWAG00000007495) #17 ADAM10 (ENSCWAG00000007713) #18 MINDY2 (ENSCWAG00000000066) #19 SLTM (ENSCWAG00000000113) #20 RNF111 (ENSCWAG00000000151) #21 CCNB2 (ENSCWAG00000000194) #22 MYO1E (ENSCWAG00000000231) #24 FAM81A (ENSCWAG00000000260) #25 GCNT3 (ENSCWAG00000000278) #26 GTF2A2 (ENSCWAG00000000294) BNIP2 (ENSCWAG00000000316) #27 FOXB1 (ENSCWAG00000000336) #28 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Cetacea ANCESTRAL SPECIES 2 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.fb ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00390000015537.v.a.b.b ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 Odontoceti ANCESTRAL SPECIES 2 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00960000192699 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.fb ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00390000015537.v.a.b.b ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 Sperm whale DUPLICATION Sperm whale DUPLICATION Sperm whale MODERN SPECIES 2 MNS1 (ENSPCTG00005004828) #8 ZNF280D (ENSPCTG00005004865) #9 ENSPCTG00005004946 TCF12 (ENSPCTG00005005020) #10 CGNL1 (ENSPCTG00005005300) #11 MYZAP (ENSPCTG00005005348) #12 POLR2M (ENSPCTG00005005433) #13 ALDH1A2 (ENSPCTG00005005493) #15 AQP9 (ENSPCTG00005005660) #16 LIPC (ENSPCTG00005005721) #17 ADAM10 (ENSPCTG00005005786) #18 MINDY2 (ENSPCTG00005006000) #19 ENSPCTG00005006055 SLTM (ENSPCTG00005006094) #20 RNF111 (ENSPCTG00005006164) #21 CCNB2 (ENSPCTG00005008748) #22 MYO1E (ENSPCTG00005008840) #24 FAM81A (ENSPCTG00005009006) #25 GCNT3 (ENSPCTG00005009050) #26 GTF2A2 (ENSPCTG00005009084) BNIP2 (ENSPCTG00005009246) #27 FOXB1 (ENSPCTG00005009501) #28 ANXA2 (ENSPCTG00005009521) ##29 ICE2 (ENSPCTG00005009584) #30 RORA (ENSPCTG00005009731) #31 ENSPCTG00005009916 VPS13C (ENSPCTG00005010003) #32 ENSPCTG00005010262 ENSPCTG00005010311 TLN2 (ENSPCTG00005010395) #37 TPM1 (ENSPCTG00005010565) Sperm whale MODERN SPECIES 11 MBD3 (ENSPCTG00005019289) MRPL54 (ENSPCTG00005019236) APBA3 (ENSPCTG00005019206) ENSPCTG00005019177 ENSPCTG00005019154 PIP5K1C (ENSPCTG00005019009) TLE2 (ENSPCTG00005018210) TLE5 (ENSPCTG00005018020) ENSPCTG00005017955 DOHH (ENSPCTG00005017916) SMIM24 (ENSPCTG00005017813) NFIC (ENSPCTG00005017610) ENSPCTG00005017573 ENSPCTG00005017562 ZNF555 (ENSPCTG00005017508) ENSPCTG00005017499 #22 RAX2 (ENSPCTG00005017465) MATK (ENSPCTG00005017055) ENSPCTG00005017007 ENSPCTG00005016973 ATCAY (ENSPCTG00005016906) NMRK2 (ENSPCTG00005016732) DAPK3 (ENSPCTG00005016679) EEF2 (ENSPCTG00005016617) PIAS4 (ENSPCTG00005016559) CREB3L3 (ENSPCTG00005016528) SIRT6 (ENSPCTG00005016278) ENSPCTG00005016256 YJU2 (ENSPCTG00005016179) SHD (ENSPCTG00005016052) FSD1 (ENSPCTG00005015759) Sperm whale MODERN SPECIES 5 MAP3K14 (ENSPCTG00005014939) ARHGAP27 (ENSPCTG00005014993) ENSPCTG00005015310 RDM1 (ENSPCTG00005015356) LYZL6 (ENSPCTG00005015532) ENSPCTG00005015570 RPRML (ENSPCTG00005015584) GOSR2 (ENSPCTG00005015631) WNT9B (ENSPCTG00005016233) WNT3 (ENSPCTG00005016337) NSF (ENSPCTG00005016413) ENSPCTG00005016474 ENSPCTG00005016519 ENSPCTG00005016576 KANSL1 (ENSPCTG00005016850) ENSPCTG00005017051 #22 ENSPCTG00005017099 CDC27 (ENSPCTG00005017181) MYL4 (ENSPCTG00005017300) ITGB3 (ENSPCTG00005017389) ENSPCTG00005017460 EFCAB3 (ENSPCTG00005017505) METTL2A (ENSPCTG00005017723) TLK2 (ENSPCTG00005017878) ENSPCTG00005008823 MARCH10 (ENSPCTG00005008874) TANC2 (ENSPCTG00005009102) CYB561 (ENSPCTG00005009445) ACE (ENSPCTG00005009598) ENSPCTG00005009761 TACO1 (ENSPCTG00005009791) Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00910000148328 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.fb ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00390000015537.v.a.b.b ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00910000147045 ENSGT00940000154699 #37 Dolphin MODERN SPECIES 3213 AQP9 (ENSTTRG00000005159) #16 LIPC (ENSTTRG00000005183) #17 ADAM10 (ENSTTRG00000005205) #18 MINDY2 (ENSTTRG00000005227) #19 SLTM (ENSTTRG00000005246) #20 RNF111 (ENSTTRG00000005259) #21 CCNB2 (ENSTTRG00000005262) #22 MYO1E (ENSTTRG00000005265) #24 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00500000044920.h ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.fb ENSGT00940000158531 #27 ENSGT00940000154576.s.b ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00940000153096.b.c.b.a.b.b.a.a.a ENSGT00390000015537.v.a.b.b ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g Vaquita MODERN SPECIES 11 TEX9 (ENSPSNG00000002550) #7 MNS1 (ENSPSNG00000002522) #8 ZNF280D (ENSPSNG00000002413) #9 TCF12 (ENSPSNG00000002365) #10 CGNL1 (ENSPSNG00000002273) #11 MYZAP (ENSPSNG00000002163) #12 POLR2M (ENSPSNG00000002108) #13 ALDH1A2 (ENSPSNG00000002037) #15 AQP9 (ENSPSNG00000001984) #16 LIPC (ENSPSNG00000001932) #17 ADAM10 (ENSPSNG00000001884) #18 MINDY2 (ENSPSNG00000001818) #19 SLTM (ENSPSNG00000001794) #20 RNF111 (ENSPSNG00000001766) #21 ENSPSNG00000001751 CCNB2 (ENSPSNG00000001729) #22 MYO1E (ENSPSNG00000001661) #24 FAM81A (ENSPSNG00000001585) #25 GCNT3 (ENSPSNG00000001564) #26 ENSPSNG00000001542 BNIP2 (ENSPSNG00000001478) #27 ENSPSNG00000001436 FOXB1 (ENSPSNG00000001422) #28 ANXA2 (ENSPSNG00000001393) ##29 ICE2 (ENSPSNG00000001344) #30 ENSPSNG00000001324 RORA (ENSPSNG00000001296) #31 ENSPSNG00000001268 VPS13C (ENSPSNG00000001057) #32 ENSPSNG00000000958 ENSPSNG00000000941 Monodontidae ANCESTRAL SPECIES 27 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00500000044920.h ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572.fb ENSGT00940000158531 #27 ENSGT00940000154576.s.b ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00940000153096.b.c.b.a.b.b.a.a.a ENSGT00390000015537.v.a.b.b ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g Narwhal MODERN SPECIES 308 TEX9 (ENSMMNG00015008497) #7 MNS1 (ENSMMNG00015008552) #8 ZNF280D (ENSMMNG00015008588) #9 TCF12 (ENSMMNG00015008652) #10 CGNL1 (ENSMMNG00015008737) #11 MYZAP (ENSMMNG00015008782) #12 POLR2M (ENSMMNG00015008834) #13 ALDH1A2 (ENSMMNG00015008867) #15 AQP9 (ENSMMNG00015008896) #16 LIPC (ENSMMNG00015008926) #17 ADAM10 (ENSMMNG00015008952) #18 MINDY2 (ENSMMNG00015008982) #19 SLTM (ENSMMNG00015009010) #20 RNF111 (ENSMMNG00015009033) #21 ENSMMNG00015009045 CCNB2 (ENSMMNG00015009062) #22 MYO1E (ENSMMNG00015009083) #24 FAM81A (ENSMMNG00015009117) #25 GCNT3 (ENSMMNG00015009131) #26 ENSMMNG00015009139 BNIP2 (ENSMMNG00015009206) #27 ENSMMNG00015009251 FOXB1 (ENSMMNG00015009255) #28 ANXA2 (ENSMMNG00015009260) ##29 ICE2 (ENSMMNG00015009274) #30 RORA (ENSMMNG00015009290) #31 ENSMMNG00015009303 ENSMMNG00015009305 VPS13C (ENSMMNG00015009472) #32 ENSMMNG00015009789 TLN2 (ENSMMNG00015009817) #37 Beluga whale MODERN SPECIES 20 MNS1 (ENSDLEG00000011429) #8 ZNF280D (ENSDLEG00000011456) #9 TCF12 (ENSDLEG00000011499) #10 CGNL1 (ENSDLEG00000011635) #11 MYZAP (ENSDLEG00000011677) #12 POLR2M (ENSDLEG00000011717) #13 ALDH1A2 (ENSDLEG00000011724) #15 AQP9 (ENSDLEG00000011745) #16 LIPC (ENSDLEG00000011760) #17 ADAM10 (ENSDLEG00000011799) #18 MINDY2 (ENSDLEG00000011823) #19 ENSDLEG00000011841 SLTM (ENSDLEG00000011855) #20 RNF111 (ENSDLEG00000011891) #21 ENSDLEG00000011930 CCNB2 (ENSDLEG00000011945) #22 MYO1E (ENSDLEG00000011982) #24 FAM81A (ENSDLEG00000012090) #25 ENSDLEG00000012103 GCNT3 (ENSDLEG00000012113) #26 GTF2A2 (ENSDLEG00000012117) BNIP2 (ENSDLEG00000012134) #27 ENSDLEG00000012193 FOXB1 (ENSDLEG00000012206) #28 ANXA2 (ENSDLEG00000012217) ##29 ENSDLEG00000012242 ICE2 (ENSDLEG00000000261) #30 RORA (ENSDLEG00000000324) #31 ENSDLEG00000000365 ENSDLEG00000000383 VPS13C (ENSDLEG00000000606) #32 Blue whale MODERN SPECIES 11 MNS1 (ENSBMSG00010002770) #8 ENSBMSG00010002765 ENSBMSG00010002756 #9 ENSBMSG00010002738 TCF12 (ENSBMSG00010002642) #10 CGNL1 (ENSBMSG00010002567) #11 MYZAP (ENSBMSG00010002466) #12 ENSBMSG00010002414 #13 ALDH1A2 (ENSBMSG00010002264) #15 AQP9 (ENSBMSG00010002216) #16 LIPC (ENSBMSG00010002097) #17 ADAM10 (ENSBMSG00010002053) #18 MINDY2 (ENSBMSG00010002021) #19 SLTM (ENSBMSG00010001996) #20 RNF111 (ENSBMSG00010001868) #21 CCNB2 (ENSBMSG00010001737) #22 MYO1E (ENSBMSG00010001489) #24 FAM81A (ENSBMSG00010001446) #25 ENSBMSG00010001413 BNIP2 (ENSBMSG00010001392) #27 FOXB1 (ENSBMSG00010001373) #28 ENSBMSG00010001360 ##29 ICE2 (ENSBMSG00010001345) #30 RORA (ENSBMSG00010001304) #31 ENSBMSG00010001281 VPS13C (ENSBMSG00010001188) #32 ENSBMSG00010001099 ENSBMSG00010001086 TLN2 (ENSBMSG00010001027) #37 TPM1 (ENSBMSG00010000776) LACTB (ENSBMSG00010000701) Pecora DUPLICATION Pecora ANCESTRAL SPECIES 6 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Percora_a ANCESTRAL SPECIES 8 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Bovidae ANCESTRAL SPECIES 7 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000012916.y.a.b Bovinae ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000015813.g.d ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT00390000001062.e ENSGT00950000182891.a.a.a Bos ANCESTRAL SPECIES 13 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000015813.g.d ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT00390000012916.y.a.b Bos_a ANCESTRAL SPECIES 53 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000015813.g.d ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT00390000012916.y.a.b Wild yak MODERN SPECIES 283 LIPC (ENSBMUG00000004247) #17 ADAM10 (ENSBMUG00000004283) #18 ENSBMUG00000004290 MINDY2 (ENSBMUG00000004308) #19 SLTM (ENSBMUG00000004937) #20 RNF111 (ENSBMUG00000005930) #21 CCNB2 (ENSBMUG00000005975) #22 MYO1E (ENSBMUG00000005995) #24 Domestic yak MODERN SPECIES 2 TCF12 (ENSBGRG00000012739) #10 CGNL1 (ENSBGRG00000012540) #11 MYZAP (ENSBGRG00000011974) #12 POLR2M (ENSBGRG00000011811) #13 ALDH1A2 (ENSBGRG00000011324) #15 AQP9 (ENSBGRG00000011032) #16 LIPC (ENSBGRG00000010472) #17 ADAM10 (ENSBGRG00000010308) #18 ENSBGRG00000010264 MINDY2 (ENSBGRG00000010110) #19 SLTM (ENSBGRG00000009817) #20 ENSBGRG00000009782 ENSBGRG00000009765 ENSBGRG00000009750 RNF111 (ENSBGRG00000009659) #21 ENSBGRG00000009460 #22 ENSBGRG00000009430 MYO1E (ENSBGRG00000008828) #24 FAM81A (ENSBGRG00000008720) #25 ENSBGRG00000008693 GCNT3 (ENSBGRG00000008683) #26 ENSBGRG00000008564 BNIP2 (ENSBGRG00000008392) #27 FOXB1 (ENSBGRG00000008353) #28 ANXA2 (ENSBGRG00000008299) ##29 ICE2 (ENSBGRG00000008178) #30 ENSBGRG00000008149 ENSBGRG00000008135 RORA (ENSBGRG00000007990) #31 ENSBGRG00000007967 VPS13C (ENSBGRG00000004877) #32 Bos_b ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000015813.g.d ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT00390000012916.y.a.b Cow MODERN SPECIES 1 ENSBTAG00000052391 #9 ENSBTAG00000053119 #10 TCF12 (ENSBTAG00000002586) #10 CGNL1 (ENSBTAG00000008575) #11 MYZAP (ENSBTAG00000002194) #12 POLR2M (ENSBTAG00000040384) #13 ALDH1A2 (ENSBTAG00000010119) #15 AQP9 (ENSBTAG00000013452) #16 ENSBTAG00000049039 LIPC (ENSBTAG00000005479) #17 ADAM10 (ENSBTAG00000005481) #18 ENSBTAG00000049189 MINDY2 (ENSBTAG00000012391) #19 SLTM (ENSBTAG00000011319) #20 RNF111 (ENSBTAG00000014181) #21 CCNB2 (ENSBTAG00000005269) #22 MYO1E (ENSBTAG00000021538) #24 FAM81A (ENSBTAG00000014699) #25 GCNT3 (ENSBTAG00000009443) #26 GTF2A2 (ENSBTAG00000010298) BNIP2 (ENSBTAG00000013493) #27 FOXB1 (ENSBTAG00000019114) #28 ANXA2 (ENSBTAG00000009615) ##29 ICE2 (ENSBTAG00000005328) #30 RORA (ENSBTAG00000015904) #31 VPS13C (ENSBTAG00000038920) #32 ENSBTAG00000010952 C2CD4B (ENSBTAG00000020814) TLN2 (ENSBTAG00000003667) #37 ENSBTAG00000040590 TPM1 (ENSBTAG00000005373) Hybrid Bos Indicus MODERN SPECIES 1 MNS1 (ENSBIXG00005018404) #8 ENSBIXG00005018423 ZNF280D (ENSBIXG00005018538) #9 TCF12 (ENSBIXG00005018770) #10 CGNL1 (ENSBIXG00005018869) #11 MYZAP (ENSBIXG00005019030) #12 POLR2M (ENSBIXG00005019093) #13 ALDH1A2 (ENSBIXG00005019214) #15 AQP9 (ENSBIXG00005019291) #16 LIPC (ENSBIXG00005003152) #17 ADAM10 (ENSBIXG00005019471) #18 ENSBIXG00005019503 MINDY2 (ENSBIXG00005019539) #19 SLTM (ENSBIXG00005003196) #20 RNF111 (ENSBIXG00005019694) #21 CCNB2 (ENSBIXG00005019754) #22 MYO1E (ENSBIXG00005019811) #24 FAM81A (ENSBIXG00005005864) #25 ENSBIXG00005019886 GCNT3 (ENSBIXG00005019900) #26 GTF2A2 (ENSBIXG00005003264) BNIP2 (ENSBIXG00005020028) #27 FOXB1 (ENSBIXG00005003289) #28 ANXA2 (ENSBIXG00005020120) ##29 ENSBIXG00005020130 ICE2 (ENSBIXG00005020165) #30 RORA (ENSBIXG00005020235) #31 VPS13C (ENSBIXG00005020334) #32 ENSBIXG00005020414 ENSBIXG00005003454 TLN2 (ENSBIXG00005020508) #37 American bison MODERN SPECIES 3000 ENSBBBG00000014604 MNS1 (ENSBBBG00000014599) #8 ZNF280D (ENSBBBG00000014586) #9 TCF12 (ENSBBBG00000009128) #10 CGNL1 (ENSBBBG00000014380) #11 MYZAP (ENSBBBG00000014366) #12 POLR2M (ENSBBBG00000014311) #13 ALDH1A2 (ENSBBBG00000014299) #15 AQP9 (ENSBBBG00000014231) #16 LIPC (ENSBBBG00000002888) #17 ADAM10 (ENSBBBG00000014183) #18 ENSBBBG00000014172 MINDY2 (ENSBBBG00000014166) #19 SLTM (ENSBBBG00000003203) #20 RNF111 (ENSBBBG00000003193) #21 CCNB2 (ENSBBBG00000014120) #22 MYO1E (ENSBBBG00000014100) #24 FAM81A (ENSBBBG00000003145) #25 GCNT3 (ENSBBBG00000003138) #26 GTF2A2 (ENSBBBG00000014065) BNIP2 (ENSBBBG00000003121) #27 Caprinae ANCESTRAL SPECIES 11 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.hb #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.h ENSGT00940000162206.g ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000012916.y.a.b Goat MODERN SPECIES 1 TEX9 (ENSCHIG00000016001) #7 MNS1 (ENSCHIG00000011779) #8 ZNF280D (ENSCHIG00000021583) #9 TCF12 (ENSCHIG00000008569) #10 CGNL1 (ENSCHIG00000012395) #11 MYZAP (ENSCHIG00000010101) #12 POLR2M (ENSCHIG00000000701) #13 ALDH1A2 (ENSCHIG00000025960) #15 AQP9 (ENSCHIG00000018286) #16 LIPC (ENSCHIG00000026829) #17 ADAM10 (ENSCHIG00000007232) #18 ENSCHIG00000004124 MINDY2 (ENSCHIG00000008343) #19 SLTM (ENSCHIG00000008780) #20 RNF111 (ENSCHIG00000023723) #21 CCNB2 (ENSCHIG00000014721) #22 MYO1E (ENSCHIG00000013110) #24 FAM81A (ENSCHIG00000015814) #25 GCNT3 (ENSCHIG00000009946) #26 GTF2A2 (ENSCHIG00000015247) ENSCHIG00000004630 BNIP2 (ENSCHIG00000025922) #27 FOXB1 (ENSCHIG00000008336) #28 ENSCHIG00000017509 ENSCHIG00000006134 ##29 ICE2 (ENSCHIG00000025114) #30 RORA (ENSCHIG00000025775) #31 VPS13C (ENSCHIG00000021131) #32 ENSCHIG00000026417 ENSCHIG00000009551 ENSCHIG00000024274 Rambouillet Sheep MODERN SPECIES 23 MNS1 (ENSOARG00020023210) #8 ZNF280D (ENSOARG00020022968) #9 TCF12 (ENSOARG00020022679) #10 ENSOARG00020022647 CGNL1 (ENSOARG00020022386) #11 MYZAP (ENSOARG00020022259) #12 POLR2M (ENSOARG00020022191) #13 ALDH1A2 (ENSOARG00020021892) #15 AQP9 (ENSOARG00020021823) #16 ENSOARG00020021759 LIPC (ENSOARG00020021564) #17 ADAM10 (ENSOARG00020021312) #18 MINDY2 (ENSOARG00020021211) #19 SLTM (ENSOARG00020021163) #20 RNF111 (ENSOARG00020021012) #21 CCNB2 (ENSOARG00020020879) #22 MYO1E (ENSOARG00020020182) #24 FAM81A (ENSOARG00020020134) #25 GCNT3 (ENSOARG00020020115) #26 GTF2A2 (ENSOARG00020019984) BNIP2 (ENSOARG00020019895) #27 FOXB1 (ENSOARG00020019859) #28 ANXA2 (ENSOARG00020019713) ##29 ICE2 (ENSOARG00020019537) #30 RORA (ENSOARG00020019090) #31 VPS13C (ENSOARG00020011169) #32 ENSOARG00020010758 TLN2 (ENSOARG00020009618) #37 TPM1 (ENSOARG00020009011) LACTB (ENSOARG00020008870) RPS27L (ENSOARG00020008837) Siberian musk deer MODERN SPECIES 257 MNS1 (ENSMMSG00000020858) #8 ZNF280D (ENSMMSG00000020750) #9 TCF12 (ENSMMSG00000020389) #10 CGNL1 (ENSMMSG00000020305) #11 MYZAP (ENSMMSG00000020205) #12 POLR2M (ENSMMSG00000020150) #13 ALDH1A2 (ENSMMSG00000019982) #15 AQP9 (ENSMMSG00000019948) #16 LIPC (ENSMMSG00000019830) #17 ADAM10 (ENSMMSG00000019713) #18 ENSMMSG00000019695 MINDY2 (ENSMMSG00000019661) #19 SLTM (ENSMMSG00000019627) #20 ENSMMSG00000019602 RNF111 (ENSMMSG00000019565) #21 ENSMMSG00000019489 #22 ENSMMSG00000019472 MYO1E (ENSMMSG00000019415) #24 FAM81A (ENSMMSG00000019367) #25 GCNT3 (ENSMMSG00000019356) #26 GTF2A2 (ENSMMSG00000019278) BNIP2 (ENSMMSG00000019237) #27 ENSMMSG00000019221 ENSMMSG00000019194 FOXB1 (ENSMMSG00000019181) #28 ENSMMSG00000019123 ##29 ICE2 (ENSMMSG00000019040) #30 RORA (ENSMMSG00000018934) #31 VPS13C (ENSMMSG00000016146) #32 ENSMMSG00000015819 ENSMMSG00000015806 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 3 ZNF280D (ENSCHYG00000017379) #9 ENSCHYG00000017295 TCF12 (ENSCHYG00000016611) #10 ENSCHYG00000016552 ENSCHYG00000016531 CGNL1 (ENSCHYG00000016114) #11 MYZAP (ENSCHYG00000015583) #12 ALDH1A2 (ENSCHYG00000014768) #15 ENSCHYG00000014708 AQP9 (ENSCHYG00000014576) #16 LIPC (ENSCHYG00000014377) #17 ADAM10 (ENSCHYG00000014132) #18 MINDY2 (ENSCHYG00000013931) #19 SLTM (ENSCHYG00000013792) #20 RNF111 (ENSCHYG00000013657) #21 ENSCHYG00000013470 #22 MYO1E (ENSCHYG00000013289) #24 FAM81A (ENSCHYG00000013193) #25 GCNT3 (ENSCHYG00000013172) #26 GTF2A2 (ENSCHYG00000013080) BNIP2 (ENSCHYG00000012834) #27 FOXB1 (ENSCHYG00000012800) #28 ANXA2 (ENSCHYG00000012695) ##29 ICE2 (ENSCHYG00000012586) #30 RORA (ENSCHYG00000012326) #31 VPS13C (ENSCHYG00000008027) #32 ENSCHYG00000007764 ENSCHYG00000007733 ENSCHYG00000007706 TLN2 (ENSCHYG00000007530) #37 TPM1 (ENSCHYG00000007247) Yarkand deer MODERN SPECIES 1323 ENSCHYG00000013676 RBM10 (ENSCHYG00000013228) NDUFB11 (ENSCHYG00000013137) ENSCHYG00000013120 RGN (ENSCHYG00000012997) JADE3 (ENSCHYG00000012941) RP2 (ENSCHYG00000012920) ENSCHYG00000012899 SLC9A7 (ENSCHYG00000012816) CHST7 (ENSCHYG00000012799) EDA2R (ENSCHYG00000012702) ENSCHYG00000012671 ENSCHYG00000012635 ENSCHYG00000012623 AR (ENSCHYG00000012242) ENSCHYG00000012187 #22 OPHN1 (ENSCHYG00000011647) STARD8 (ENSCHYG00000011208) EFNB1 (ENSCHYG00000011013) ENSCHYG00000010871 ENSCHYG00000010850 EDA (ENSCHYG00000010808) OTUD6A (ENSCHYG00000010784) AWAT2 (ENSCHYG00000010677) ENSCHYG00000010617 DGAT2L6 (ENSCHYG00000010532) ENSCHYG00000010515 AWAT1 (ENSCHYG00000010414) ARR3 (ENSCHYG00000010125) P2RY4 (ENSCHYG00000009899) KIF4A (ENSCHYG00000009559) Pecora ANCESTRAL SPECIES ENSGT00940000155405.ib #22 Percora_a ANCESTRAL SPECIES ENSGT00940000159531 ENSGT00390000009693.c.a ENSGT00390000002292.b ENSGT00940000163112 ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00940000156944 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT01030000240140 ENSGT00950000182859.A.a.b.b ENSGT00940000155405.ib #22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00390000013517 ENSGT00500000044831.a.a.b.k ENSGT00940000158850 ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.d.b ENSGT00940000159345.c.a ENSGT00940000159345.c.b.a Bovidae ANCESTRAL SPECIES ENSGT00940000154245.A ENSGT00940000159531 ENSGT00390000009693.c.a ENSGT00390000002292.b ENSGT00940000163112 ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00940000156944 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ENSGT00940000155405.ib #22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00390000013517 ENSGT00500000044831.a.a.b.k ENSGT00940000158850.j ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.d.b ENSGT00940000159345.c.a ENSGT00940000159345.c.b.a Bovinae ANCESTRAL SPECIES 2 ENSGT00950000185146 ENSGT00940000159531 ENSGT00390000009693.c.a.a.b ENSGT00390000002292.b ENSGT00940000163112 ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00940000156944 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ENSGT00940000155405.ib #22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00390000013517 ENSGT00500000044831.a.a.b.k ENSGT00940000158850.j ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A ENSGT00940000159345.d.a.b ENSGT00940000159345.d.b ENSGT00940000159345.c.a Bos ANCESTRAL SPECIES 3 ENSGT00950000185146 ENSGT00940000159531 ENSGT00390000009693.c.a.a.b ENSGT00390000002292.b ENSGT00940000163112 ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00940000156944 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ENSGT00940000155405.ib #22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00500000044831.a.a.b.k ENSGT00390000013517 ENSGT00940000158850.j ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A.g.b ENSGT00940000159345.d.a.b ENSGT00940000159345.d.b ENSGT00940000159345.c.a Bos_a ANCESTRAL SPECIES 2 ENSGT01030000234975 ENSGT00940000159531 ENSGT00390000009693.c.a.a.b ENSGT00390000002292.b ENSGT00940000163112 ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00940000156944 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ENSGT00940000155405.ib #22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00390000013517 ENSGT00500000044831.a.a.b.k ENSGT00940000158850.j ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000159345.c.a ENSGT00940000159345.c.b.a ENSGT00940000161609 ENSGT00940000159345.c.b.b Domestic yak MODERN SPECIES 27 ENSBGRG00000000592 ATP10B (ENSBGRG00000000552) ENSBGRG00000000492 SLU7 (ENSBGRG00000000435) FAM200C (ENSBGRG00000017873) C1QTNF2 (ENSBGRG00000017808) FABP6 (ENSBGRG00000017725) PWWP2A (ENSBGRG00000017485) TTC1 (ENSBGRG00000017355) ADRA1B (ENSBGRG00000017305) ENSBGRG00000017048 IL12B (ENSBGRG00000016956) UBLCP1 (ENSBGRG00000016766) RNF145 (ENSBGRG00000016333) EBF1 (ENSBGRG00000015942) ENSBGRG00000015864 #22 CLINT1 (ENSBGRG00000015659) LSM11 (ENSBGRG00000015580) THG1L (ENSBGRG00000015516) SOX30 (ENSBGRG00000015400) ADAM19 (ENSBGRG00000015117) NIPAL4 (ENSBGRG00000015077) FNDC9 (ENSBGRG00000015053) CYFIP2 (ENSBGRG00000014210) ITK (ENSBGRG00000013958) GARIN3 (ENSBGRG00000013910) MED7 (ENSBGRG00000013891) ENSBGRG00000013868 ENSBGRG00000013840 ENSBGRG00000013748 ENSBGRG00000013704 Bos_b ANCESTRAL SPECIES 2 ENSGT00950000185146 ENSGT00940000159531 ENSGT00390000009693.c.a.a.b ENSGT00390000002292.b ENSGT00940000163112 ENSGT00940000159591 ENSGT00940000159349 ENSGT00940000157139 ENSGT00940000157692 ENSGT00940000157213 ENSGT00940000156944 ENSGT00390000012630.A ENSGT00390000010107 ENSGT00940000157281 ENSGT00950000182859.A.a.b.b ENSGT00940000155405.ib #22 ENSGT00940000155650 ENSGT00390000012944 ENSGT00390000011705 ENSGT00940000161042 ENSGT00940000159624 ENSGT00940000159087 ENSGT00500000044831.a.a.b.k ENSGT00390000013517 ENSGT00940000158850.j ENSGT00940000162063 ENSGT00940000154444.B ENSGT00940000154444.A.g.b ENSGT00940000159345.d.a.b.a ENSGT00940000159345.d.a.b.b ENSGT00940000159345.d.b Cow MODERN SPECIES 26 PTTG1 (ENSBTAG00000012184) SLU7 (ENSBTAG00000008457) FAM200C (ENSBTAG00000030282) C1QTNF2 (ENSBTAG00000054287) CCNJL (ENSBTAG00000046343) FABP6 (ENSBTAG00000010632) ENSBTAG00000053260 PWWP2A (ENSBTAG00000010341) TTC1 (ENSBTAG00000010321) ADRA1B (ENSBTAG00000040253) ENSBTAG00000050222 IL12B (ENSBTAG00000004741) UBLCP1 (ENSBTAG00000009103) RNF145 (ENSBTAG00000025099) EBF1 (ENSBTAG00000037508) ENSBTAG00000050321 #22 CLINT1 (ENSBTAG00000016199) LSM11 (ENSBTAG00000010363) THG1L (ENSBTAG00000010359) SOX30 (ENSBTAG00000020491) ADAM19 (ENSBTAG00000003836) NIPAL4 (ENSBTAG00000020213) CYFIP2 (ENSBTAG00000008916) ITK (ENSBTAG00000000306) GARIN3 (ENSBTAG00000013450) MED7 (ENSBTAG00000050263) HAVCR2 (ENSBTAG00000000495) ENSBTAG00000036102 ENSBTAG00000052849 TIMD4 (ENSBTAG00000013185) ENSBTAG00000030297 Siberian musk deer MODERN SPECIES 64 FAM200C (ENSMMSG00000005473) ENSMMSG00000005454 C1QTNF2 (ENSMMSG00000005413) CCNJL (ENSMMSG00000005397) FABP6 (ENSMMSG00000005362) PWWP2A (ENSMMSG00000005304) TTC1 (ENSMMSG00000005250) ADRA1B (ENSMMSG00000005230) ENSMMSG00000005198 ENSMMSG00000005162 IL12B (ENSMMSG00000005127) UBLCP1 (ENSMMSG00000005080) RNF145 (ENSMMSG00000004942) ENSMMSG00000004886 EBF1 (ENSMMSG00000004757) ENSMMSG00000004165 #22 CLINT1 (ENSMMSG00000004140) LSM11 (ENSMMSG00000004127) THG1L (ENSMMSG00000004121) SOX30 (ENSMMSG00000004081) ADAM19 (ENSMMSG00000004015) NIPAL4 (ENSMMSG00000003992) FNDC9 (ENSMMSG00000003985) CYFIP2 (ENSMMSG00000003916) ITK (ENSMMSG00000003869) GARIN3 (ENSMMSG00000003849) MED7 (ENSMMSG00000003843) HAVCR2 (ENSMMSG00000003829) ENSMMSG00000003817 ENSMMSG00000003800 ENSMMSG00000003791 Camelidae ANCESTRAL SPECIES 23 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Arabian camel MODERN SPECIES 32 TEX9 (ENSCDRG00005014221) #7 MNS1 (ENSCDRG00005014157) #8 ZNF280D (ENSCDRG00005013979) #9 TCF12 (ENSCDRG00005013440) #10 CGNL1 (ENSCDRG00005013208) #11 MYZAP (ENSCDRG00005012933) #12 POLR2M (ENSCDRG00005012854) #13 AQP9 (ENSCDRG00005012783) #16 ALDH1A2 (ENSCDRG00005012276) #15 LIPC (ENSCDRG00005012154) #17 ADAM10 (ENSCDRG00005011988) #18 ENSCDRG00005011957 MINDY2 (ENSCDRG00005011843) #19 SLTM (ENSCDRG00005011603) #20 RNF111 (ENSCDRG00005011330) #21 CCNB2 (ENSCDRG00005011168) #22 MYO1E (ENSCDRG00005010981) #24 FAM81A (ENSCDRG00005010891) #25 GCNT3 (ENSCDRG00005010851) #26 GTF2A2 (ENSCDRG00005010692) BNIP2 (ENSCDRG00005010618) #27 FOXB1 (ENSCDRG00005010590) #28 ENSCDRG00005010380 ##29 ICE2 (ENSCDRG00005010259) #30 RORA (ENSCDRG00005010112) #31 VPS13C (ENSCDRG00005009482) #32 ENSCDRG00005009161 TLN2 (ENSCDRG00005008648) #37 TPM1 (ENSCDRG00005006508) ENSCDRG00005006370 ENSCDRG00005004006 Alpaca MODERN SPECIES 1313 RNF111 (ENSVPAG00000012478) #21 CCNB2 (ENSVPAG00000012481) #22 MYO1E (ENSVPAG00000012482) #24 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 Carnivora ANCESTRAL SPECIES ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 ENSGT00390000001062 Caniformia ANCESTRAL SPECIES 12 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT01070000253911 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921 Caniformia_b ANCESTRAL SPECIES 15 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j.mb ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT01070000253911 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Ursidae ANCESTRAL SPECIES 21 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898.j.a #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j.mb ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT01070000253911 ENSGT00950000183083.a.d.a #32 ENSGT00940000154699.f #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Ursus ANCESTRAL SPECIES 73 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898.j.a #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000161970 ENSGT00940000154257.j.mb ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT01070000253911 ENSGT00950000183083.a.d.a #32 ENSGT00940000154699.f #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a American black bear MODERN SPECIES 2332 ENSUAMG00000006773 #20 RNF111 (ENSUAMG00000006769) #21 CCNB2 (ENSUAMG00000006755) #22 MYO1E (ENSUAMG00000006435) #24 Polar bear MODERN SPECIES 282 RFX7 (ENSUMAG00000023577) TEX9 (ENSUMAG00000023578) #7 MNS1 (ENSUMAG00000023585) #8 ZNF280D (ENSUMAG00000023594) #9 TCF12 (ENSUMAG00000023601) #10 CGNL1 (ENSUMAG00000023607) #11 MYZAP (ENSUMAG00000023621) #12 POLR2M (ENSUMAG00000023632) #13 ALDH1A2 (ENSUMAG00000023636) #15 AQP9 (ENSUMAG00000023641) #16 LIPC (ENSUMAG00000023645) #17 ADAM10 (ENSUMAG00000023649) #18 MINDY2 (ENSUMAG00000023650) #19 SLTM (ENSUMAG00000023678) #20 RNF111 (ENSUMAG00000023950) #21 CCNB2 (ENSUMAG00000023954) #22 MYO1E (ENSUMAG00000023955) #24 FAM81A (ENSUMAG00000023957) #25 GCNT3 (ENSUMAG00000023958) #26 GTF2A2 (ENSUMAG00000023959) BNIP2 (ENSUMAG00000023960) #27 ENSUMAG00000023966 ENSUMAG00000023968 ##29 ICE2 (ENSUMAG00000023974) #30 RORA (ENSUMAG00000023981) #31 ENSUMAG00000023995 VPS13C (ENSUMAG00000024057) #32 TLN2 (ENSUMAG00000024313) #37 TPM1 (ENSUMAG00000024489) LACTB (ENSUMAG00000024551) ENSUMAG00000024552 Giant Panda MODERN SPECIES 15 MNS1 (ENSAMEG00000003083) #8 ZNF280D (ENSAMEG00000003065) #9 ENSAMEG00000026462 TCF12 (ENSAMEG00000010612) #10 CGNL1 (ENSAMEG00000010575) #11 MYZAP (ENSAMEG00000010550) #12 ENSAMEG00000026876 #13 AQP9 (ENSAMEG00000010516) #16 ENSAMEG00000010508 ENSAMEG00000010535 #15 LIPC (ENSAMEG00000003097) #17 ADAM10 (ENSAMEG00000003056) #18 MINDY2 (ENSAMEG00000026245) #19 SLTM (ENSAMEG00000004537) #20 RNF111 (ENSAMEG00000004568) #21 CCNB2 (ENSAMEG00000004603) #22 MYO1E (ENSAMEG00000004643) #24 FAM81A (ENSAMEG00000004782) #25 GCNT3 (ENSAMEG00000018673) #26 GTF2A2 (ENSAMEG00000005744) BNIP2 (ENSAMEG00000005709) #27 FOXB1 (ENSAMEG00000019472) #28 ENSAMEG00000008055 ##29 ICE2 (ENSAMEG00000008039) #30 RORA (ENSAMEG00000008017) #31 ENSAMEG00000017453 VPS13C (ENSAMEG00000017363) #32 TLN2 (ENSAMEG00000012004) #37 ENSAMEG00000007224 LACTB (ENSAMEG00000007262) RPS27L (ENSAMEG00000007270) Mustelinae ANCESTRAL SPECIES 57 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 American mink MODERN SPECIES 132 ENSNVIG00000001115 TCF12 (ENSNVIG00000000931) #10 CGNL1 (ENSNVIG00000000923) #11 MYZAP (ENSNVIG00000000857) #12 GRL1A (ENSNVIG00000000834) #13 AQP9 (ENSNVIG00000000811) #16 AL1A2 (ENSNVIG00000000690) #15 LIPC (ENSNVIG00000000464) #17 ADA10 (ENSNVIG00000000408) #18 ENSNVIG00000000402 MINDY2 (ENSNVIG00000000373) #19 SLTM (ENSNVIG00000000365) #20 ENSNVIG00000000361 #20 ENSNVIG00000000355 RNF111 (ENSNVIG00000000316) #21 CCNB2 (ENSNVIG00000000283) #22 MYO1E (ENSNVIG00000000225) #24 FAM81A (ENSNVIG00000000188) #25 ENSNVIG00000000181 Ferret MODERN SPECIES 403 TCF12 (ENSMPUG00000004438) #10 CGNL1 (ENSMPUG00000004423) #11 MYZAP (ENSMPUG00000004417) #12 POLR2M (ENSMPUG00000004414) #13 ALDH1A2 (ENSMPUG00000004407) #15 AQP9 (ENSMPUG00000004398) #16 ENSMPUG00000004389 LIPC (ENSMPUG00000004381) #17 ADAM10 (ENSMPUG00000004375) #18 MINDY2 (ENSMPUG00000004320) #19 SLTM (ENSMPUG00000004229) #20 RNF111 (ENSMPUG00000004214) #21 CCNB2 (ENSMPUG00000004129) #22 MYO1E (ENSMPUG00000004116) #24 FAM81A (ENSMPUG00000004110) #25 Canidae ANCESTRAL SPECIES 15 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT01070000253911 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921.b Canis_lupus ANCESTRAL SPECIES 17 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00390000006696.bb ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j.ob ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT01070000253911 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00950000184921.b Dingo MODERN SPECIES 205 ZNF280D (ENSCAFG00020012271) #9 ENSCAFG00020012249 #10 ENSCAFG00020012159 #10 CGNL1 (ENSCAFG00020011993) #11 ENSCAFG00020011988 MYZAP (ENSCAFG00020011984) #12 POLR2M (ENSCAFG00020011980) #13 ALDH1A2 (ENSCAFG00020011975) #15 ENSCAFG00020011974 AQP9 (ENSCAFG00020011973) #16 LIPC (ENSCAFG00020011968) #17 ADAM10 (ENSCAFG00020011960) #18 MINDY2 (ENSCAFG00020011948) #19 SLTM (ENSCAFG00020011253) #20 RNF111 (ENSCAFG00020011102) #21 CCNB2 (ENSCAFG00020011050) #22 MYO1E (ENSCAFG00020011013) #24 FAM81A (ENSCAFG00020010984) #25 GCNT3 (ENSCAFG00020010978) #26 GTF2A2 (ENSCAFG00020010969) BNIP2 (ENSCAFG00020010953) #27 FOXB1 (ENSCAFG00020010944) #28 ENSCAFG00020010905 ##29 ICE2 (ENSCAFG00020010796) #30 RORA (ENSCAFG00020010743) #31 ENSCAFG00020010727 VPS13C (ENSCAFG00020010673) #32 TLN2 (ENSCAFG00020009609) #37 ENSCAFG00020009531 TPM1 (ENSCAFG00020009521) LACTB (ENSCAFG00020009493) Dog MODERN SPECIES 23 TEX9 (ENSCAFG00845029502) #7 MNS1 (ENSCAFG00845029645) #8 ZNF280D (ENSCAFG00845029677) #9 TCF12 (ENSCAFG00845029773) #10 CGNL1 (ENSCAFG00845029856) #11 ENSCAFG00845029942 ENSCAFG00845030020 #12 ALDH1A2 (ENSCAFG00845030136) #15 ENSCAFG00845030206 AQP9 (ENSCAFG00845015193) #16 LIPC (ENSCAFG00845015307) #17 ADAM10 (ENSCAFG00845015520) #18 MINDY2 (ENSCAFG00845015725) #19 SLTM (ENSCAFG00845015853) #20 RNF111 (ENSCAFG00845016023) #21 CCNB2 (ENSCAFG00845016098) #22 MYO1E (ENSCAFG00845016229) #24 ENSCAFG00845016391 FAM81A (ENSCAFG00845016440) #25 ENSCAFG00845016556 #26 GTF2A2 (ENSCAFG00845016636) BNIP2 (ENSCAFG00845016807) #27 FOXB1 (ENSCAFG00845016929) #28 ANXA2 (ENSCAFG00845017171) ##29 ICE2 (ENSCAFG00845017491) #30 RORA (ENSCAFG00845017841) #31 ENSCAFG00845018067 VPS13C (ENSCAFG00845018323) #32 ENSCAFG00845019202 TLN2 (ENSCAFG00845019529) #37 TPM1 (ENSCAFG00845019944) Red fox MODERN SPECIES TEX9 (ENSVVUG00000000942) #7 MNS1 (ENSVVUG00000000969) #8 ZNF280D (ENSVVUG00000001009) #9 ENSVVUG00000001065 #10 TCF12 (ENSVVUG00000001081) #10 CGNL1 (ENSVVUG00000001119) #11 MYZAP (ENSVVUG00000001200) #12 POLR2M (ENSVVUG00000001253) #13 ALDH1A2 (ENSVVUG00000001283) #15 AQP9 (ENSVVUG00000001306) #16 LIPC (ENSVVUG00000001352) #17 ADAM10 (ENSVVUG00000001386) #18 MINDY2 (ENSVVUG00000001426) #19 SLTM (ENSVVUG00000001450) #20 RNF111 (ENSVVUG00000001485) #21 CCNB2 (ENSVVUG00000001497) #22 MYO1E (ENSVVUG00000001541) #24 ENSVVUG00000001567 FAM81A (ENSVVUG00000001584) #25 GCNT3 (ENSVVUG00000001601) #26 GTF2A2 (ENSVVUG00000001625) BNIP2 (ENSVVUG00000001765) #27 FOXB1 (ENSVVUG00000001836) #28 ENSVVUG00000001864 ANXA2 (ENSVVUG00000001871) ##29 ICE2 (ENSVVUG00000001884) #30 RORA (ENSVVUG00000001910) #31 ENSVVUG00000001953 ENSVVUG00000001972 ENSVVUG00000002002 VPS13C (ENSVVUG00000002780) #32 Felidae ANCESTRAL SPECIES 1 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00940000164336 Panthera ANCESTRAL SPECIES 3 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00930000152855 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Tiger MODERN SPECIES 204 ENSPTIG00000009862 #9 TCF12 (ENSPTIG00000010407) #10 CGNL1 (ENSPTIG00000016583) #11 MYZAP (ENSPTIG00000017186) #12 POLR2M (ENSPTIG00000019395) #13 ALDH1A2 (ENSPTIG00000021049) #15 AQP9 (ENSPTIG00000016760) #16 LIPC (ENSPTIG00000017416) #17 ADAM10 (ENSPTIG00000020483) #18 MINDY2 (ENSPTIG00000021426) #19 SLTM (ENSPTIG00000021933) #20 RNF111 (ENSPTIG00000022057) #21 CCNB2 (ENSPTIG00000022086) #22 MYO1E (ENSPTIG00000002391) #24 FAM81A (ENSPTIG00000007107) #25 GTF2A2 (ENSPTIG00000008342) BNIP2 (ENSPTIG00000010345) #27 FOXB1 (ENSPTIG00000011045) #28 ANXA2 (ENSPTIG00000011256) ##29 ICE2 (ENSPTIG00000013570) #30 RORA (ENSPTIG00000015398) #31 VPS13C (ENSPTIG00000020414) #32 TLN2 (ENSPTIG00000013165) #37 TPM1 (ENSPTIG00000020687) LACTB (ENSPTIG00000021953) ENSPTIG00000000664 RAB8B (ENSPTIG00000005636) ENSPTIG00000007292 Panthera_a ANCESTRAL SPECIES 15 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00960000187413 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206.j ENSGT00930000152855 ENSGT00940000162206.i ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a leopard MODERN SPECIES 7 ENSPPRG00000004158 TCF12 (ENSPPRG00000006795) #10 ENSPPRG00000007010 CGNL1 (ENSPPRG00000007520) #11 MYZAP (ENSPPRG00000008038) #12 ENSPPRG00000008155 #13 ENSPPRG00000008593 AQP9 (ENSPPRG00000008797) #16 ALDH1A2 (ENSPPRG00000009754) #15 LIPC (ENSPPRG00000010248) #17 ADAM10 (ENSPPRG00000010697) #18 MINDY2 (ENSPPRG00000011830) #19 SLTM (ENSPPRG00000012400) #20 ENSPPRG00000022159 RNF111 (ENSPPRG00000012896) #21 CCNB2 (ENSPPRG00000013358) #22 MYO1E (ENSPPRG00000013746) #24 FAM81A (ENSPPRG00000014412) #25 GCNT3 (ENSPPRG00000022210) #26 GTF2A2 (ENSPPRG00000015117) BNIP2 (ENSPPRG00000015819) #27 FOXB1 (ENSPPRG00000014358) #28 ANXA2 (ENSPPRG00000017032) ##29 ICE2 (ENSPPRG00000019966) #30 RORA (ENSPPRG00000025030) #31 VPS13C (ENSPPRG00000024819) #32 ENSPPRG00000014483 ENSPPRG00000024744 ENSPPRG00000024704 TLN2 (ENSPPRG00000024152) #37 ENSPPRG00000023820 lion MODERN SPECIES 6 RFX7 (ENSPLOG00000001487) TEX9 (ENSPLOG00000001413) #7 MNS1 (ENSPLOG00000001293) #8 ZNF280D (ENSPLOG00000001244) #9 TCF12 (ENSPLOG00000001054) #10 CGNL1 (ENSPLOG00000000873) #11 MYZAP (ENSPLOG00000000827) #12 POLR2M (ENSPLOG00000000778) #13 AQP9 (ENSPLOG00000000752) #16 ALDH1A2 (ENSPLOG00000000630) #15 LIPC (ENSPLOG00000000384) #17 ADAM10 (ENSPLOG00000020025) #18 MINDY2 (ENSPLOG00000019972) #19 SLTM (ENSPLOG00000019866) #20 RNF111 (ENSPLOG00000019792) #21 CCNB2 (ENSPLOG00000019712) #22 MYO1E (ENSPLOG00000019658) #24 FAM81A (ENSPLOG00000019602) #25 GCNT3 (ENSPLOG00000019578) #26 GTF2A2 (ENSPLOG00000019533) BNIP2 (ENSPLOG00000019485) #27 FOXB1 (ENSPLOG00000019463) #28 ANXA2 (ENSPLOG00000019362) ##29 ICE2 (ENSPLOG00000019330) #30 RORA (ENSPLOG00000019217) #31 VPS13C (ENSPLOG00000016750) #32 ENSPLOG00000016384 ENSPLOG00000016368 TLN2 (ENSPLOG00000015663) #37 TPM1 (ENSPLOG00000015292) LACTB (ENSPLOG00000015093) Cat MODERN SPECIES 237 RFX7 (ENSFCAG00000029408) ENSFCAG00000045000 TEX9 (ENSFCAG00000008935) #7 MNS1 (ENSFCAG00000042011) #8 ZNF280D (ENSFCAG00000030645) #9 TCF12 (ENSFCAG00000031674) #10 CGNL1 (ENSFCAG00000018538) #11 MYZAP (ENSFCAG00000014906) #12 POLR2M (ENSFCAG00000041205) #13 AQP9 (ENSFCAG00000028244) #16 ALDH1A2 (ENSFCAG00000033553) #15 LIPC (ENSFCAG00000008009) #17 MINDY2 (ENSFCAG00000025467) #19 ADAM10 (ENSFCAG00000023688) #20 RNF111 (ENSFCAG00000009412) #21 CCNB2 (ENSFCAG00000009413) #22 MYO1E (ENSFCAG00000009414) #24 FAM81A (ENSFCAG00000022356) #25 GCNT3 (ENSFCAG00000012912) #26 GTF2A2 (ENSFCAG00000012914) BNIP2 (ENSFCAG00000012916) #27 FOXB1 (ENSFCAG00000026520) #28 ANXA2 (ENSFCAG00000007862) ##29 ICE2 (ENSFCAG00000024442) #30 RORA (ENSFCAG00000013642) #31 VPS13C (ENSFCAG00000026881) #32 ENSFCAG00000040967 TLN2 (ENSFCAG00000007306) #37 TPM1 (ENSFCAG00000037855) LACTB (ENSFCAG00000027796) ENSFCAG00000033932 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.b.l ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Chiroptera ANCESTRAL SPECIES 17 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Microchiroptera ANCESTRAL SPECIES 20 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00960000192699 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00930000152855 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a Greater horseshoe bat MODERN SPECIES 24 MNS1 (ENSRFEG00010015563) #8 ZNF280D (ENSRFEG00010015417) #9 TCF12 (ENSRFEG00010015112) #10 CGNL1 (ENSRFEG00010015008) #11 MYZAP (ENSRFEG00010014850) #12 POLR2M (ENSRFEG00010014706) #13 AQP9 (ENSRFEG00010014557) #16 ALDH1A2 (ENSRFEG00010014030) #15 LIPC (ENSRFEG00010013904) #17 ADAM10 (ENSRFEG00010013728) #18 ENSRFEG00010013690 MINDY2 (ENSRFEG00010013660) #19 SLTM (ENSRFEG00010013490) #20 ENSRFEG00010013430 RNF111 (ENSRFEG00010013280) #21 CCNB2 (ENSRFEG00010013118) #22 MYO1E (ENSRFEG00010013049) #24 FAM81A (ENSRFEG00010012996) #25 GCNT3 (ENSRFEG00010012952) #26 ENSRFEG00010012833 BNIP2 (ENSRFEG00010012661) #27 FOXB1 (ENSRFEG00010012632) #28 ENSRFEG00010012585 ENSRFEG00010012519 ANXA2 (ENSRFEG00010012337) ##29 ICE2 (ENSRFEG00010012249) #30 RORA (ENSRFEG00010011929) #31 VPS13C (ENSRFEG00010011688) #32 ENSRFEG00010011647 ENSRFEG00010011606 ENSRFEG00010011581 Microbat MODERN SPECIES 960 ZNF280D (ENSMLUG00000001958) #9 TCF12 (ENSMLUG00000006205) #10 ENSMLUG00000028449 ENSMLUG00000028181 CGNL1 (ENSMLUG00000006276) #11 MYZAP (ENSMLUG00000010564) #12 POLR2M (ENSMLUG00000016026) #13 ALDH1A2 (ENSMLUG00000002098) #15 ENSMLUG00000001108 #16 LIPC (ENSMLUG00000027865) #17 ENSMLUG00000022615 ADAM10 (ENSMLUG00000005663) #18 MINDY2 (ENSMLUG00000000733) #19 SLTM (ENSMLUG00000000742) #20 RNF111 (ENSMLUG00000013496) #21 CCNB2 (ENSMLUG00000013505) #22 Megabat MODERN SPECIES 1585 RNF111 (ENSPVAG00000000604) #21 CCNB2 (ENSPVAG00000000605) #22 MYO1E (ENSPVAG00000000606) #24 Equus ANCESTRAL SPECIES 4 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257.j ##29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000163765 #33 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.b.l ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 Horse MODERN SPECIES ZNF280D (ENSECAG00000008139) #9 ENSECAG00000055172 ENSECAG00000045013 TCF12 (ENSECAG00000011678) #10 CGNL1 (ENSECAG00000011325) #11 ALDH1A2 (ENSECAG00000014750) #15 ENSECAG00000046764 AQP9 (ENSECAG00000012789) #16 LIPC (ENSECAG00000020896) #17 ADAM10 (ENSECAG00000007963) #18 ENSECAG00000052250 ENSECAG00000059129 MINDY2 (ENSECAG00000019456) #19 SLTM (ENSECAG00000011267) #20 RNF111 (ENSECAG00000024602) #21 CCNB2 (ENSECAG00000014813) #22 MYO1E (ENSECAG00000024352) #24 ENSECAG00000038907 FAM81A (ENSECAG00000012692) #25 GTF2A2 (ENSECAG00000012182) GCNT3 (ENSECAG00000004325) #26 BNIP2 (ENSECAG00000022557) #27 FOXB1 (ENSECAG00000004144) #28 ANXA2 (ENSECAG00000012670) ##29 ICE2 (ENSECAG00000008412) #30 RORA (ENSECAG00000016384) #31 VPS13C (ENSECAG00000017182) #32 ENSECAG00000038352 #33 ENSECAG00000035298 #33 ENSECAG00000052463 TLN2 (ENSECAG00000020488) #37 Donkey MODERN SPECIES 11 MNS1 (ENSEASG00005009763) #8 ENSEASG00005024241 ENSEASG00005025175 #9 ENSEASG00005009750 #10 ENSEASG00005006845 #10 CGNL1 (ENSEASG00005006838) #11 MYZAP (ENSEASG00005006833) #12 POLR2M (ENSEASG00005006830) #13 ALDH1A2 (ENSEASG00005006828) #15 AQP9 (ENSEASG00005006825) #16 LIPC (ENSEASG00005006810) #17 ADAM10 (ENSEASG00005006804) #18 MINDY2 (ENSEASG00005006799) #19 SLTM (ENSEASG00005006792) #20 RNF111 (ENSEASG00005006789) #21 CCNB2 (ENSEASG00005006782) #22 MYO1E (ENSEASG00005006777) #24 FAM81A (ENSEASG00005006773) #25 GCNT3 (ENSEASG00005006772) #26 GTF2A2 (ENSEASG00005006771) BNIP2 (ENSEASG00005006764) #27 FOXB1 (ENSEASG00005006761) #28 ANXA2 (ENSEASG00005006755) ##29 ICE2 (ENSEASG00005006725) #30 RORA (ENSEASG00005006718) #31 VPS13C (ENSEASG00005006073) #32 ENSEASG00005030086 ENSEASG00005032205 ENSEASG00005032522 TLN2 (ENSEASG00005005435) #37 ENSEASG00005024602 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155405 #22 Hedgehog MODERN SPECIES 5124 ENSEEUG00000001143 #22 Common shrew MODERN SPECIES 3964 CCNB2 (ENSSARG00000008300) #22 Atlantogenata ANCESTRAL SPECIES 2 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000159331.b #26 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000160522 #28 ENSGT00940000154257 #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a Afrotheria ANCESTRAL SPECIES 58 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000154257 #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a ENSGT00940000155363 ENSGT00390000002049.c.b Afrotheria_a ANCESTRAL SPECIES 56 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00390000014572 ENSGT00940000158531 #27 ENSGT00940000154257 #29 ENSGT00390000006883 #30 ENSGT00940000157387 #31 ENSGT00950000183083.a.d.a #32 ENSGT00940000162206 ENSGT00940000154699 #37 ENSGT01030000234542.b.a.a.b.a.a ENSGT00390000001062 ENSGT00950000182891.a.a.a ENSGT00940000155363 ENSGT00390000002049.c.b Elephant MODERN SPECIES 466 TEX9 (ENSLAFG00000016272) #7 MNS1 (ENSLAFG00000013495) #8 ZNF280D (ENSLAFG00000005060) #9 TCF12 (ENSLAFG00000010546) #10 CGNL1 (ENSLAFG00000015742) #11 MYZAP (ENSLAFG00000013840) #12 POLR2M (ENSLAFG00000028328) #13 ALDH1A2 (ENSLAFG00000018094) #15 AQP9 (ENSLAFG00000012160) #16 ENSLAFG00000028987 LIPC (ENSLAFG00000003533) #17 ADAM10 (ENSLAFG00000003535) #18 MINDY2 (ENSLAFG00000026046) #19 SLTM (ENSLAFG00000017922) #20 RNF111 (ENSLAFG00000004816) #21 CCNB2 (ENSLAFG00000004822) #22 MYO1E (ENSLAFG00000004825) #24 FAM81A (ENSLAFG00000014758) #25 GTF2A2 (ENSLAFG00000010773) BNIP2 (ENSLAFG00000014187) #27 ANXA2 (ENSLAFG00000011404) #29 ICE2 (ENSLAFG00000017637) #30 RORA (ENSLAFG00000000577) #31 ENSLAFG00000012810 #32 ENSLAFG00000027908 #32 ENSLAFG00000013413 TLN2 (ENSLAFG00000000520) #37 TPM1 (ENSLAFG00000004960) LACTB (ENSLAFG00000015480) RPS27L (ENSLAFG00000015475) RAB8B (ENSLAFG00000001771) Hyrax MODERN SPECIES 4206 RNF111 (ENSPCAG00000016268) #21 ENSPCAG00000016371 #22 ENSPCAG00000016411 #24 Tenrec MODERN SPECIES 4952 CCNB2 (ENSETEG00000015475) #22 Xenarthra ANCESTRAL SPECIES 307 ENSGT00940000155047 #10 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 Sloth MODERN SPECIES 4586 ENSCHOG00000005150 #22 Armadillo MODERN SPECIES 959 ENSDNOG00000003182 #10 MYZAP (ENSDNOG00000003966) #12 ENSDNOG00000042909 #13 ENSDNOG00000044354 ALDH1A2 (ENSDNOG00000010541) #15 AQP9 (ENSDNOG00000044325) #16 LIPC (ENSDNOG00000040890) #17 ENSDNOG00000036584 ADAM10 (ENSDNOG00000040738) #18 MINDY2 (ENSDNOG00000013776) #19 SLTM (ENSDNOG00000002975) #20 RNF111 (ENSDNOG00000002542) #21 CCNB2 (ENSDNOG00000033547) #22 MYO1E (ENSDNOG00000003626) #24 ENSDNOG00000032898 FAM81A (ENSDNOG00000034819) #25 Marsupialia ANCESTRAL SPECIES ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00510000050001 ENSGT00940000159103 ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00550000074698.l ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000162591 ENSGT00950000182907.a.b.b.b Marsupialia_b ANCESTRAL SPECIES ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B.r ENSGT00940000156594 ENSGT00940000157011 ENSGT00510000050001 ENSGT00940000159103 ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00550000074698.l ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000162591 ENSGT00950000182907.a.b.b.b Diprotodontia ANCESTRAL SPECIES ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B.r ENSGT00940000156594 ENSGT00940000157011 ENSGT00510000050001 ENSGT00940000159103 ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00550000074698.l.d ENSGT00550000074698.l.c.a ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000162591 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B.r ENSGT00940000156594 ENSGT00940000157011 ENSGT00510000050001 ENSGT00940000159103 ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00550000074698.l.d ENSGT00550000074698.l.c.a.a.b.a.a ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000162591 koala MODERN SPECIES TEX9 (ENSPCIG00000018498) #7 MNS1 (ENSPCIG00000018499) #8 ZNF280D (ENSPCIG00000018502) #9 TCF12 (ENSPCIG00000026273) #10 CGNL1 (ENSPCIG00000026263) #11 MYZAP (ENSPCIG00000032158) #12 POLR2M (ENSPCIG00000026255) #13 ALDH1A2 (ENSPCIG00000026253) #15 AQP9 (ENSPCIG00000036207) #16 LIPC (ENSPCIG00000028345) #17 ADAM10 (ENSPCIG00000028347) #18 MINDY2 (ENSPCIG00000028352) #19 SLTM (ENSPCIG00000028356) #20 ENSPCIG00000028362 RNF111 (ENSPCIG00000023892) #21 CCNB2 (ENSPCIG00000023888) #22 MYO1E (ENSPCIG00000023881) #24 FAM81A (ENSPCIG00000023876) #25 ENSPCIG00000023869 THSD4 (ENSPCIG00000009624) LRRC49 (ENSPCIG00000020753) THAP10 (ENSPCIG00000020763) LARP6 (ENSPCIG00000020765) UACA (ENSPCIG00000020484) TLE3 (ENSPCIG00000020857) ENSPCIG00000034041 ENSPCIG00000020777 KIF23 (ENSPCIG00000013844) PAQR5 (ENSPCIG00000013860) GLCE (ENSPCIG00000013869) NOX5 (ENSPCIG00000013880) Common wonbat MODERN SPECIES 581 LIPC (ENSVURG00010018727) #17 ADAM10 (ENSVURG00010018710) #18 MINDY2 (ENSVURG00010018700) #19 SLTM (ENSVURG00010018693) #20 RNF111 (ENSVURG00010018682) #21 CCNB2 (ENSVURG00010018670) #22 MYO1E (ENSVURG00010018655) #24 FAM81A (ENSVURG00010018639) #25 ENSVURG00010018634 ENSVURG00010018625 THSD4 (ENSVURG00010018583) ENSVURG00010018573 LRRC49 (ENSVURG00010018538) LARP6 (ENSVURG00010018515) UACA (ENSVURG00010018458) TLE3 (ENSVURG00010018378) ENSVURG00010018359 ENSVURG00010018348 KIF23 (ENSVURG00010018250) GLCE (ENSVURG00010018222) NOX5 (ENSVURG00010018209) Wallaby MODERN SPECIES 6261 ENSMEUG00000016283 #22 MYO1E (ENSMEUG00000016292) #24 Tasmanian devil MODERN SPECIES 1 TEX9 (ENSSHAG00000017749) #7 MNS1 (ENSSHAG00000017711) #8 ZNF280D (ENSSHAG00000017405) #9 ENSSHAG00000023900 #10 ENSSHAG00000015935 #10 CGNL1 (ENSSHAG00000014820) #11 MYZAP (ENSSHAG00000014214) #12 POLR2M (ENSSHAG00000013954) #13 ALDH1A2 (ENSSHAG00000012217) #15 AQP9 (ENSSHAG00000011444) #16 LIPC (ENSSHAG00000006097) #17 ADAM10 (ENSSHAG00000025847) #18 MINDY2 (ENSSHAG00000029720) #19 SLTM (ENSSHAG00000015395) #20 RNF111 (ENSSHAG00000014920) #21 CCNB2 (ENSSHAG00000014698) #22 MYO1E (ENSSHAG00000014042) #24 ENSSHAG00000012883 #25 ENSSHAG00000011727 LRRC49 (ENSSHAG00000023183) THAP10 (ENSSHAG00000030659) LARP6 (ENSSHAG00000018495) UACA (ENSSHAG00000018301) TLE3 (ENSSHAG00000017102) ENSSHAG00000022254 RPLP1 (ENSSHAG00000014818) KIF23 (ENSSHAG00000014701) ENSSHAG00000014510 GLCE (ENSSHAG00000023440) NOX5 (ENSSHAG00000012412) ENSSHAG00000010906 Opossum MODERN SPECIES ENSMODG00000051438 TCF12 (ENSMODG00000008311) #10 CGNL1 (ENSMODG00000008365) #11 MYZAP (ENSMODG00000008437) #12 ENSMODG00000008459 #13 ENSMODG00000048733 ALDH1A2 (ENSMODG00000008641) #15 ENSMODG00000008662 #16 ENSMODG00000038854 LIPC (ENSMODG00000008689) #17 ADAM10 (ENSMODG00000008735) #18 ENSMODG00000039109 MINDY2 (ENSMODG00000008761) #19 ENSMODG00000008794 #20 RNF111 (ENSMODG00000008829) #21 CCNB2 (ENSMODG00000008862) #22 MYO1E (ENSMODG00000008886) #24 ENSMODG00000008897 #25 ENSMODG00000048044 ENSMODG00000008920 THSD4 (ENSMODG00000008931) LRRC49 (ENSMODG00000009017) THAP10 (ENSMODG00000009022) LARP6 (ENSMODG00000046230) UACA (ENSMODG00000009133) TLE3 (ENSMODG00000009200) ENSMODG00000009209 ENSMODG00000009218 KIF23 (ENSMODG00000009242) PAQR5 (ENSMODG00000009253) ENSMODG00000038950 Platypus MODERN SPECIES 19 RFX7 (ENSOANG00000008526) ENSOANG00000008525 #7 MNS1 (ENSOANG00000009459) #8 ZNF280D (ENSOANG00000046608) #9 TCF12 (ENSOANG00000009462) #10 CGNL1 (ENSOANG00000042911) #11 MYZAP (ENSOANG00000007558) #12 ENSOANG00000044862 #13 ALDH1A2 (ENSOANG00000047195) #15 AQP9 (ENSOANG00000041403) #16 LIPC (ENSOANG00000048492) #17 ADAM10 (ENSOANG00000009151) #18 ENSOANG00000038536 #19 SLTM (ENSOANG00000012311) #20 RNF111 (ENSOANG00000012312) #21 CCNB2 (ENSOANG00000012313) #22 MYO1E (ENSOANG00000031114) #24 FAM81A (ENSOANG00000009485) #25 ENSOANG00000038164 THSD4 (ENSOANG00000039575) LRRC49 (ENSOANG00000014128) ENSOANG00000041385 ENSOANG00000037386 ENSOANG00000038197 IQGAP1 (ENSOANG00000000671) ENSOANG00000011894 ENSOANG00000050958 SEC11A (ENSOANG00000015254) ENSOANG00000039259 ENSOANG00000036605 ENSOANG00000011884 Sauria ANCESTRAL SPECIES 10 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Archelosauria ANCESTRAL SPECIES 13 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Archosauria ANCESTRAL SPECIES 9 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Aves ANCESTRAL SPECIES 14 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Neognathae ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Galloanserae ANCESTRAL SPECIES 10 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Anatidae ANCESTRAL SPECIES 23 ENSGT00730000111210 #8 ENSGT00940000158889.b.b #9 ENSGT00940000175332 ENSGT00940000158889.b.a #9 ENSGT00940000158889.a #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Pink-footed goose MODERN SPECIES 21 NEDD4 (ENSABRG00000020096) RFX7 (ENSABRG00000020057) ENSABRG00000020051 MNS1 (ENSABRG00000020045) #8 ENSABRG00000019932 #9 TCF12 (ENSABRG00000019704) #10 CGNL1 (ENSABRG00000019633) #11 MYZAP (ENSABRG00000019604) #12 ALDH1A2 (ENSABRG00000017236) #15 AQP9 (ENSABRG00000016918) #16 LIPC (ENSABRG00000016671) #17 ADAM10 (ENSABRG00000016551) #18 MINDY2 (ENSABRG00000016495) #19 SLTM (ENSABRG00000016347) #20 RNF111 (ENSABRG00000016214) #21 CCNB2 (ENSABRG00000016184) #22 MYO1E (ENSABRG00000015343) #24 FAM81A (ENSABRG00000015310) #25 ENSABRG00000015306 THSD4 (ENSABRG00000015299) LRRC49 (ENSABRG00000015293) LARP6 (ENSABRG00000015287) ADAL (ENSABRG00000015282) TM2D3 (ENSABRG00000015279) TARS3 (ENSABRG00000015273) TJP1 (ENSABRG00000015240) ENTREP2 (ENSABRG00000015223) APBA2 (ENSABRG00000015217) MCEE (ENSABRG00000015215) MPHOSPH10 (ENSABRG00000015211) FAN1 (ENSABRG00000015206) Duck MODERN SPECIES 2 MNS1 (ENSAPLG00000006558) #8 ENSAPLG00000021149 ENSAPLG00000006903 #9 ENSAPLG00000025642 #9 ENSAPLG00000024067 #10 ENSAPLG00000007225 #10 CGNL1 (ENSAPLG00000007650) #11 MYZAP (ENSAPLG00000008051) #12 ALDH1A2 (ENSAPLG00000008541) #15 AQP9 (ENSAPLG00000010168) #16 LIPC (ENSAPLG00000014018) #17 ADAM10 (ENSAPLG00000013495) #18 MINDY2 (ENSAPLG00000013166) #19 SLTM (ENSAPLG00000013025) #20 RNF111 (ENSAPLG00000012549) #21 CCNB2 (ENSAPLG00000011947) #22 MYO1E (ENSAPLG00000010820) #24 FAM81A (ENSAPLG00000010722) #25 ENSAPLG00000010434 THSD4 (ENSAPLG00000010423) LRRC49 (ENSAPLG00000009920) ENSAPLG00000030560 LARP6 (ENSAPLG00000009914) ADAL (ENSAPLG00000009775) TM2D3 (ENSAPLG00000009696) TARS3 (ENSAPLG00000008485) TJP1 (ENSAPLG00000007911) ENTREP2 (ENSAPLG00000007880) APBA2 (ENSAPLG00000007575) MCEE (ENSAPLG00000007573) FAN1 (ENSAPLG00000007284) Phasianidae ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461.s #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Japanese quail MODERN SPECIES 1 TEX9 (ENSCJPG00005016240) #7 MNS1 (ENSCJPG00005016239) #8 ENSCJPG00005016238 ZNF280D (ENSCJPG00005016237) #9 TCF12 (ENSCJPG00005016236) #10 CGNL1 (ENSCJPG00005016235) #11 MYZAP (ENSCJPG00005016234) #12 POLR2M (ENSCJPG00005016233) #13 ALDH1A2 (ENSCJPG00005012931) #15 AQP9 (ENSCJPG00005012926) #16 LIPC (ENSCJPG00005012746) #17 ADAM10 (ENSCJPG00005012732) #18 MINDY2 (ENSCJPG00005012730) #19 SLTM (ENSCJPG00005012727) #20 RNF111 (ENSCJPG00005012724) #21 CCNB2 (ENSCJPG00005012721) #22 MYO1E (ENSCJPG00005012713) #24 FAM81A (ENSCJPG00005012711) #25 CHRNA7 (ENSCJPG00005012710) THSD4 (ENSCJPG00005012708) LRRC49 (ENSCJPG00005012706) LARP6 (ENSCJPG00005012705) ADAL (ENSCJPG00005012704) TM2D3 (ENSCJPG00005012703) TARS3 (ENSCJPG00005012702) ENSCJPG00005012701 TJP1 (ENSCJPG00005012700) ENTREP2 (ENSCJPG00005012699) APBA2 (ENSCJPG00005012698) MCEE (ENSCJPG00005012697) MPHOSPH10 (ENSCJPG00005012696) Phasianidae_b ANCESTRAL SPECIES 11 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461.s #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Chicken MODERN SPECIES 1 ENSGALG00010023226 TEX9 (ENSGALG00010023219) #7 MNS1 (ENSGALG00010023207) #8 ZNF280D (ENSGALG00010023201) #9 TCF12 (ENSGALG00010023170) #10 CGNL1 (ENSGALG00010023126) #11 MYZAP (ENSGALG00010023113) #12 POLR2M (ENSGALG00010023071) #13 ALDH1A2 (ENSGALG00010023060) #15 AQP9 (ENSGALG00010023054) #16 LIPC (ENSGALG00010022994) #17 ADAM10 (ENSGALG00010025336) #18 FAM63B (ENSGALG00010022976) #19 SLTM (ENSGALG00010022957) #20 RNF111 (ENSGALG00010022928) #21 CCNB1 (ENSGALG00010022881) #22 FAM81A (ENSGALG00010022863) #25 CHRNA7 (ENSGALG00010022834) MYO1E (ENSGALG00010022809) #24 THSD4 (ENSGALG00010022759) LRRC49 (ENSGALG00010022711) LARP6 (ENSGALG00010024902) ADAL (ENSGALG00010024897) TM2D3 (ENSGALG00010024867) TARSL2 (ENSGALG00010024859) TJP1 (ENSGALG00010024853) FAM189A1 (ENSGALG00010024835) APBA2 (ENSGALG00010024814) MCEE (ENSGALG00010024785) MPHOSPH10 (ENSGALG00010024776) FAN1 (ENSGALG00010024762) Turkey MODERN SPECIES 3 ENSMGAG00000004865 ENSMGAG00000004922 ENSMGAG00000020668 ENSMGAG00000017675 ENSMGAG00000019431 ENSMGAG00000004951 ENSMGAG00000005044 ENSMGAG00000005077 ENSMGAG00000005055 ENSMGAG00000005083 ENSMGAG00000005112 ENSMGAG00000005132 ENSMGAG00000005177 #25 ENSMGAG00000005190 #24 ENSMGAG00000016492 #24 CCNB2 (ENSMGAG00000005262) #22 ENSMGAG00000005286 #21 ENSMGAG00000005313 #20 ENSMGAG00000005379 #18 ENSMGAG00000005444 #17 ENSMGAG00000019744 ENSMGAG00000005501 #16 ENSMGAG00000005523 #15 ENSMGAG00000005643 #13 ENSMGAG00000005658 #12 ENSMGAG00000005589 #11 ENSMGAG00000005667 #10 ENSMGAG00000016556 #10 ENSMGAG00000017930 ENSMGAG00000005701 #9 ENSMGAG00000019860 #9 Neognathae_b ANCESTRAL SPECIES 13 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Neognathae_c ANCESTRAL SPECIES 15 ENSGT01050000244970.b ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Golden eagle MODERN SPECIES 21 RFX7 (ENSACCG00020005717) TEX9 (ENSACCG00020005705) #7 MNS1 (ENSACCG00020005685) #8 ZNF280D (ENSACCG00020005610) #9 TCF12 (ENSACCG00020005493) #10 CGNL1 (ENSACCG00020005435) #11 MYZAP (ENSACCG00020005410) #12 POLR2M (ENSACCG00020005396) #13 ALDH1A2 (ENSACCG00020005373) #15 AQP9 (ENSACCG00020005336) #16 LIPC (ENSACCG00020005327) #17 ADAM10 (ENSACCG00020005313) #18 MINDY2 (ENSACCG00020005299) #19 SLTM (ENSACCG00020005275) #20 RNF111 (ENSACCG00020005250) #21 CCNB2 (ENSACCG00020005235) #22 MYO1E (ENSACCG00020005196) #24 FAM81A (ENSACCG00020005161) #25 ENSACCG00020005149 THSD4 (ENSACCG00020005122) LRRC49 (ENSACCG00020005084) LARP6 (ENSACCG00020005075) ADAL (ENSACCG00020005067) TM2D3 (ENSACCG00020005060) TARS3 (ENSACCG00020004893) TJP1 (ENSACCG00020004652) ENTREP2 (ENSACCG00020004606) APBA2 (ENSACCG00020004579) MCEE (ENSACCG00020004567) MPHOSPH10 (ENSACCG00020004552) FAN1 (ENSACCG00020004537) Kakapo MODERN SPECIES 1 RFX7 (ENSSHBG00005020120) TEX9 (ENSSHBG00005020129) #7 MNS1 (ENSSHBG00005020137) #8 ZNF280D (ENSSHBG00005020145) #9 TCF12 (ENSSHBG00005020169) #10 CGNL1 (ENSSHBG00005020183) #11 MYZAP (ENSSHBG00005020198) #12 POLR2M (ENSSHBG00005020207) #13 ALDH1A2 (ENSSHBG00005020211) #15 AQP9 (ENSSHBG00005020214) #16 LIPC (ENSSHBG00005020219) #17 ADAM10 (ENSSHBG00005020223) #18 MINDY2 (ENSSHBG00005020225) #19 SLTM (ENSSHBG00005020230) #20 RNF111 (ENSSHBG00005020234) #21 CCNB2 (ENSSHBG00005020237) #22 MYO1E (ENSSHBG00005020280) #24 FAM81A (ENSSHBG00005020350) #25 ENSSHBG00005020354 THSD4 (ENSSHBG00005020365) LRRC49 (ENSSHBG00005020392) LARP6 (ENSSHBG00005020407) ADAL (ENSSHBG00005020410) TM2D3 (ENSSHBG00005020416) TARS3 (ENSSHBG00005020419) TJP1 (ENSSHBG00005020432) ENTREP2 (ENSSHBG00005020454) APBA2 (ENSSHBG00005020461) MCEE (ENSSHBG00005020465) MPHOSPH10 (ENSSHBG00005020469) FAN1 (ENSSHBG00005020475) Passeriformes ANCESTRAL SPECIES 12 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Medium ground finch MODERN SPECIES 16 RFX7 (ENSGFOG00000011617) TEX9 (ENSGFOG00000011623) #7 MNS1 (ENSGFOG00000011632) #8 ZNF280D (ENSGFOG00000011637) #9 TCF12 (ENSGFOG00000011648) #10 CGNL1 (ENSGFOG00000011668) #11 MYZAP (ENSGFOG00000011676) #12 POLR2M (ENSGFOG00000011689) #13 ALDH1A2 (ENSGFOG00000011695) #15 AQP9 (ENSGFOG00000011700) #16 LIPC (ENSGFOG00000011709) #17 ADAM10 (ENSGFOG00000011720) #18 MINDY2 (ENSGFOG00000011738) #19 SLTM (ENSGFOG00000011769) #20 RNF111 (ENSGFOG00000011985) #21 CCNB2 (ENSGFOG00000011997) #22 MYO1E (ENSGFOG00000012007) #24 FAM81A (ENSGFOG00000012019) #25 ENSGFOG00000012024 THSD4 (ENSGFOG00000012032) LRRC49 (ENSGFOG00000012037) LARP6 (ENSGFOG00000012041) ADAL (ENSGFOG00000012044) TM2D3 (ENSGFOG00000012048) TARS3 (ENSGFOG00000012098) TJP1 (ENSGFOG00000012759) ENTREP2 (ENSGFOG00000012797) APBA2 (ENSGFOG00000012815) MCEE (ENSGFOG00000012820) MPHOSPH10 (ENSGFOG00000012821) FAN1 (ENSGFOG00000012829) Passeroidea ANCESTRAL SPECIES 12 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Zebra finch MODERN SPECIES 1 RFX7 (ENSTGUG00000025950) TEX9 (ENSTGUG00000006348) #7 MNS1 (ENSTGUG00000006330) #8 ZNF280D (ENSTGUG00000006310) #9 TCF12 (ENSTGUG00000006270) #10 CGNL1 (ENSTGUG00000006242) #11 MYZAP (ENSTGUG00000006225) #12 POLR2M (ENSTGUG00000023181) #13 ALDH1A2 (ENSTGUG00000006178) #15 AQP9 (ENSTGUG00000006153) #16 LIPC (ENSTGUG00000006120) #17 ADAM10 (ENSTGUG00000006081) #18 MINDY2 (ENSTGUG00000006043) #19 SLTM (ENSTGUG00000006017) #20 RNF111 (ENSTGUG00000005994) #21 CCNB2 (ENSTGUG00000005982) #22 MYO1E (ENSTGUG00000005894) #24 FAM81A (ENSTGUG00000005890) #25 ENSTGUG00000005850 THSD4 (ENSTGUG00000005809) LARP6 (ENSTGUG00000024859) LRRC49 (ENSTGUG00000005700) TM2D3 (ENSTGUG00000005792) TARS3 (ENSTGUG00000005726) TJP1 (ENSTGUG00000005653) ENTREP2 (ENSTGUG00000005645) APBA2 (ENSTGUG00000005613) MPHOSPH10 (ENSTGUG00000005578) MCEE (ENSTGUG00000027488) FAN1 (ENSTGUG00000005575) MTMR10 (ENSTGUG00000005555) Common canary MODERN SPECIES 12 TEX9 (ENSSCAG00000000461) #7 MNS1 (ENSSCAG00000000435) #8 ENSSCAG00000000416 ZNF280D (ENSSCAG00000000400) #9 TCF12 (ENSSCAG00000000350) #10 CGNL1 (ENSSCAG00000000325) #11 MYZAP (ENSSCAG00000000309) #12 POLR2M (ENSSCAG00000000300) #13 ALDH1A2 (ENSSCAG00000000270) #15 AQP9 (ENSSCAG00000000247) #16 LIPC (ENSSCAG00000000234) #17 ADAM10 (ENSSCAG00000000209) #18 MINDY2 (ENSSCAG00000000187) #19 SLTM (ENSSCAG00000000153) #20 RNF111 (ENSSCAG00000016558) #21 CCNB2 (ENSSCAG00000016552) #22 MYO1E (ENSSCAG00000016544) #24 FAM81A (ENSSCAG00000016543) #25 ENSSCAG00000016541 THSD4 (ENSSCAG00000016540) LRRC49 (ENSSCAG00000016537) LARP6 (ENSSCAG00000016536) ADAL (ENSSCAG00000016534) TM2D3 (ENSSCAG00000016533) TARS3 (ENSSCAG00000016522) TJP1 (ENSSCAG00000016515) ENTREP2 (ENSSCAG00000016512) APBA2 (ENSSCAG00000016510) MCEE (ENSSCAG00000016508) MPHOSPH10 (ENSSCAG00000016507) FAN1 (ENSSCAG00000016504) Flycatcher MODERN SPECIES 1 ENSFALG00000025884 TEX9 (ENSFALG00000025263) #7 MNS1 (ENSFALG00000012101) #8 ZNF280D (ENSFALG00000012113) #9 TCF12 (ENSFALG00000012146) #10 CGNL1 (ENSFALG00000012171) #11 MYZAP (ENSFALG00000028894) #12 POLR2M (ENSFALG00000024129) #13 ALDH1A2 (ENSFALG00000012199) #15 AQP9 (ENSFALG00000024121) #16 LIPC (ENSFALG00000012245) #17 ADAM10 (ENSFALG00000012254) #18 MINDY2 (ENSFALG00000012269) #19 SLTM (ENSFALG00000012285) #20 RNF111 (ENSFALG00000012315) #21 CCNB2 (ENSFALG00000012342) #22 MYO1E (ENSFALG00000012355) #24 FAM81A (ENSFALG00000027686) #25 ENSFALG00000026917 THSD4 (ENSFALG00000012368) ENSFALG00000012375 ENSFALG00000012395 LARP6 (ENSFALG00000025422) ENSFALG00000012412 ENSFALG00000012444 TJP1 (ENSFALG00000012482) ENSFALG00000012512 APBA2 (ENSFALG00000012520) ENSFALG00000028553 ENSFALG00000012524 FAN1 (ENSFALG00000012528) Great tit MODERN SPECIES 1 RFX7 (ENSPMJG00000018467) TEX9 (ENSPMJG00000018466) #7 MNS1 (ENSPMJG00000018465) #8 ZNF280D (ENSPMJG00000018464) #9 TCF12 (ENSPMJG00000018462) #10 CGNL1 (ENSPMJG00000018460) #11 MYZAP (ENSPMJG00000018458) #12 POLR2M (ENSPMJG00000018457) #13 ALDH1A2 (ENSPMJG00000016819) #15 AQP9 (ENSPMJG00000016818) #16 LIPC (ENSPMJG00000016726) #17 ADAM10 (ENSPMJG00000016725) #18 MINDY2 (ENSPMJG00000016724) #19 SLTM (ENSPMJG00000016582) #20 RNF111 (ENSPMJG00000016570) #21 CCNB2 (ENSPMJG00000016564) #22 MYO1E (ENSPMJG00000015983) #24 FAM81A (ENSPMJG00000015957) #25 CHRFAM7A (ENSPMJG00000015956) THSD4 (ENSPMJG00000015955) LRRC49 (ENSPMJG00000015954) LARP6 (ENSPMJG00000015953) ADAL (ENSPMJG00000015952) TM2D3 (ENSPMJG00000015951) TARS3 (ENSPMJG00000015950) TJP1 (ENSPMJG00000015946) ENTREP2 (ENSPMJG00000015944) APBA2 (ENSPMJG00000015942) MCEE (ENSPMJG00000015941) MPHOSPH10 (ENSPMJG00000015940) FAN1 (ENSPMJG00000015939) African ostrich MODERN SPECIES 834 RFX7 (ENSSCUG00000014399) TEX9 (ENSSCUG00000014401) #7 MNS1 (ENSSCUG00000014403) #8 ZNF280D (ENSSCUG00000014412) #9 TCF12 (ENSSCUG00000014425) #10 CGNL1 (ENSSCUG00000014437) #11 MYZAP (ENSSCUG00000014440) #12 POLR2M (ENSSCUG00000014446) #13 ALDH1A2 (ENSSCUG00000014587) #15 AQP9 (ENSSCUG00000014737) #16 LIPC (ENSSCUG00000014743) #17 ADAM10 (ENSSCUG00000014747) #18 MINDY2 (ENSSCUG00000014754) #19 SLTM (ENSSCUG00000014764) #20 RNF111 (ENSSCUG00000014769) #21 CCNB2 (ENSSCUG00000014772) #22 MYO1E (ENSSCUG00000014780) #24 FAM81A (ENSSCUG00000014814) #25 ENSSCUG00000014822 ENSSCUG00000014824 THSD4 (ENSSCUG00000014830) LRRC49 (ENSSCUG00000014845) LARP6 (ENSSCUG00000014858) ADAL (ENSSCUG00000014865) TM2D3 (ENSSCUG00000014869) TARS3 (ENSSCUG00000014877) TJP1 (ENSSCUG00000014899) ENSSCUG00000014950 APBA2 (ENSSCUG00000014957) MCEE (ENSSCUG00000014963) MPHOSPH10 (ENSSCUG00000014973) Australian saltwater crocodile MODERN SPECIES 31 ENSCPRG00005009661 ENSCPRG00005009644 ENSCPRG00005009638 ENSCPRG00005009570 ENSCPRG00005009560 ENSCPRG00005009557 ENSCPRG00005009555 ENSCPRG00005009538 ENSCPRG00005009533 ENSCPRG00005009529 LIPC (ENSCPRG00005009476) #17 ADAM10 (ENSCPRG00005009466) #18 MINDY2 (ENSCPRG00005009458) #19 SLTM (ENSCPRG00005009446) #20 RNF111 (ENSCPRG00005009440) #21 CCNB2 (ENSCPRG00005009430) #22 MYO1E (ENSCPRG00005009420) #24 FAM81A (ENSCPRG00005009418) #25 ENSCPRG00005009402 ENSCPRG00005009390 THSD4 (ENSCPRG00005009367) LRRC49 (ENSCPRG00005009349) LARP6 (ENSCPRG00005009342) ADAL (ENSCPRG00005009337) TM2D3 (ENSCPRG00005009334) TARS3 (ENSCPRG00005009190) TJP1 (ENSCPRG00005009117) ENTREP2 (ENSCPRG00005009096) ENSCPRG00005009073 ENSCPRG00005009066 ENSCPRG00005008952 Cryptodira ANCESTRAL SPECIES 13 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Emydidae ANCESTRAL SPECIES 21 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 painted turtle MODERN SPECIES 2410 TEX9 (ENSCPBG00000004273) #7 MNS1 (ENSCPBG00000004298) #8 ENSCPBG00000004327 ENSCPBG00000004363 #9 ENSCPBG00000004803 #9 TCF12 (ENSCPBG00000004845) #10 CGNL1 (ENSCPBG00000004924) #11 MYZAP (ENSCPBG00000004950) #12 POLR2M (ENSCPBG00000004965) #13 ALDH1A2 (ENSCPBG00000004982) #15 AQP9 (ENSCPBG00000004992) #16 ENSCPBG00000005016 #18 MINDY2 (ENSCPBG00000005835) #19 SLTM (ENSCPBG00000006045) #20 RNF111 (ENSCPBG00000010682) #21 CCNB2 (ENSCPBG00000010694) #22 MYO1E (ENSCPBG00000010702) #24 FAM81A (ENSCPBG00000010724) #25 ENSCPBG00000010732 ENSCPBG00000010741 ENSCPBG00000010742 THSD4 (ENSCPBG00000010747) LRRC49 (ENSCPBG00000010765) LARP6 (ENSCPBG00000010771) ADAL (ENSCPBG00000010776) TM2D3 (ENSCPBG00000010781) TARS3 (ENSCPBG00000010792) TJP1 (ENSCPBG00000010820) ENTREP2 (ENSCPBG00000010857) APBA2 (ENSCPBG00000010888) MCEE (ENSCPBG00000010926) Three-toed box turtle MODERN SPECIES 27 TEX9 (ENSTMTG00000022905) #7 MNS1 (ENSTMTG00000022902) #8 ZNF280D (ENSTMTG00000022895) #9 ENSTMTG00000022894 #10 ENSTMTG00000022893 #10 CGNL1 (ENSTMTG00000022891) #11 MYZAP (ENSTMTG00000022878) #12 POLR2M (ENSTMTG00000022874) #13 ALDH1A2 (ENSTMTG00000022845) #15 AQP9 (ENSTMTG00000022831) #16 LIPC (ENSTMTG00000022828) #17 ADAM10 (ENSTMTG00000022823) #18 MINDY2 (ENSTMTG00000022818) #19 SLTM (ENSTMTG00000022776) #20 RNF111 (ENSTMTG00000022740) #21 CCNB2 (ENSTMTG00000022735) #22 MYO1E (ENSTMTG00000022631) #24 ENSTMTG00000022596 THSD4 (ENSTMTG00000022590) LRRC49 (ENSTMTG00000022586) LARP6 (ENSTMTG00000022584) ADAL (ENSTMTG00000022581) TM2D3 (ENSTMTG00000022578) TARS3 (ENSTMTG00000022451) TJP1 (ENSTMTG00000022342) ENTREP2 (ENSTMTG00000022331) APBA2 (ENSTMTG00000022324) MCEE (ENSTMTG00000022321) MPHOSPH10 (ENSTMTG00000022316) FAN1 (ENSTMTG00000022309) MTMR10 (ENSTMTG00000022303) Testudinidae ANCESTRAL SPECIES 3 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a.b #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000154617.B ENSGT00940000156594 ENSGT00940000157011 ENSGT00940000159103 ENSGT00950000183113.b.a ENSGT00940000158389 ENSGT00940000159348.f ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 Abingdon island giant tortoise MODERN SPECIES 964 ENSCABG00000007421 #19 SLTM (ENSCABG00000007446) #20 RNF111 (ENSCABG00000008433) #21 CCNB2 (ENSCABG00000008441) #22 MYO1E (ENSCABG00000008446) #24 FAM81A (ENSCABG00000008452) #25 ENSCABG00000008458 Goode s thornscrub tortoise MODERN SPECIES 1 ENSGEVG00005005592 #7 MNS1 (ENSGEVG00005005603) #8 ZNF280D (ENSGEVG00005005673) #9 ENSGEVG00005005841 #10 TCF12 (ENSGEVG00005005908) #10 CGNL1 (ENSGEVG00005006058) #11 MYZAP (ENSGEVG00005006307) #12 POLR2M (ENSGEVG00005006362) #13 ALDH1A2 (ENSGEVG00005006412) #15 AQP9 (ENSGEVG00005006552) #16 LIPC (ENSGEVG00005006594) #17 ADAM10 (ENSGEVG00005006648) #18 MINDY2 (ENSGEVG00005006676) #19 SLTM (ENSGEVG00005006854) #20 RNF111 (ENSGEVG00005007444) #21 CCNB2 (ENSGEVG00005007484) #22 MYO1E (ENSGEVG00005007601) #24 FAM81A (ENSGEVG00005007916) #25 ENSGEVG00005007968 ENSGEVG00005007998 THSD4 (ENSGEVG00005008026) LRRC49 (ENSGEVG00005008116) LARP6 (ENSGEVG00005008172) ADAL (ENSGEVG00005008188) TM2D3 (ENSGEVG00005008215) TARS3 (ENSGEVG00005008239) TJP1 (ENSGEVG00005008329) ENTREP2 (ENSGEVG00005008482) APBA2 (ENSGEVG00005008523) MCEE (ENSGEVG00005008574) MPHOSPH10 (ENSGEVG00005008583) Chinese turtle MODERN SPECIES 755 CCNB2 (ENSPSIG00000010738) #22 ENSPSIG00000010733 FAM81A (ENSPSIG00000010670) #25 ENSPSIG00000010525 ENSPSIG00000010105 Lepidosauria ANCESTRAL SPECIES 19 ENSGT00940000163854.b ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 Episquamata ANCESTRAL SPECIES 9 ENSGT00940000163854.b ENSGT00940000175332 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 #37 ENSGT00940000162206 ENSGT00950000183083.a.d.a #32 Laterata ANCESTRAL SPECIES 33 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000158889 #9 ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 ENSGT00950000182891.a.a.a ENSGT00390000001062 ENSGT01030000234542.b.a.a.b.a.a ENSGT00940000154699 #37 ENSGT00940000162206 Common wall lizard MODERN SPECIES 5 TEX9 (ENSPMRG00000023481) #7 MNS1 (ENSPMRG00000023479) #8 ZNF280D (ENSPMRG00000023475) #9 TCF12 (ENSPMRG00000023467) #10 ENSPMRG00000023461 #13 ENSPMRG00000023457 #15 ENSPMRG00000023456 #15 AQP9 (ENSPMRG00000023453) #16 ENSPMRG00000023449 ENSPMRG00000023445 LIPC (ENSPMRG00000023441) #17 ADAM10 (ENSPMRG00000023435) #18 MINDY2 (ENSPMRG00000023430) #19 SLTM (ENSPMRG00000023425) #20 RNF111 (ENSPMRG00000023421) #21 CCNB2 (ENSPMRG00000023416) #22 MYO1E (ENSPMRG00000023361) #24 FAM81A (ENSPMRG00000023319) #25 TBC1D2B (ENSPMRG00000023313) DAPK2 (ENSPMRG00000023290) HERC1 (ENSPMRG00000023186) FBXL22 (ENSPMRG00000023165) USP3 (ENSPMRG00000023033) CA12 (ENSPMRG00000022998) RAB8B (ENSPMRG00000022969) RPS27L (ENSPMRG00000022964) LACTB (ENSPMRG00000022956) TPM1 (ENSPMRG00000022870) TLN2 (ENSPMRG00000022537) #37 ENSPMRG00000022445 VPS13C (ENSPMRG00000021841) #32 Argentine black and white tegu MODERN SPECIES 95 ENSSMRG00000022672 STRA6 (ENSSMRG00000022671) ISLR (ENSSMRG00000022670) ISLR2 (ENSSMRG00000022669) ENSSMRG00000022667 ENSSMRG00000022666 MYZAP (ENSSMRG00000022665) #12 POLR2M (ENSSMRG00000022664) #13 ALDH1A2 (ENSSMRG00000022663) #15 AQP9 (ENSSMRG00000022662) #16 LIPC (ENSSMRG00000022661) #17 ADAM10 (ENSSMRG00000022660) #18 MINDY2 (ENSSMRG00000022659) #19 SLTM (ENSSMRG00000022658) #20 RNF111 (ENSSMRG00000022657) #21 CCNB2 (ENSSMRG00000022656) #22 MYO1E (ENSSMRG00000022655) #24 FAM81A (ENSSMRG00000022654) #25 TBC1D2B (ENSSMRG00000022653) DAPK2 (ENSSMRG00000022652) HERC1 (ENSSMRG00000022651) FBXL22 (ENSSMRG00000022650) USP3 (ENSSMRG00000022392) CA12 (ENSSMRG00000022390) RAB8B (ENSSMRG00000022389) LACTB (ENSSMRG00000022388) TPM1 (ENSSMRG00000022387) TLN2 (ENSSMRG00000016377) #37 ENSSMRG00000016374 VPS13C (ENSSMRG00000016373) #32 RORA (ENSSMRG00000016372) #31 tuatara MODERN SPECIES 1492 LIPC (ENSSPUG00000000810) #17 ADAM10 (ENSSPUG00000000910) #18 MINDY2 (ENSSPUG00000000924) #19 ENSSPUG00000001006 #20 RNF111 (ENSSPUG00000001030) #21 CCNB2 (ENSSPUG00000001035) #22 MYO1E (ENSSPUG00000001059) #24 FAM81A (ENSSPUG00000001101) #25 ENSSPUG00000001115 Anura DUPLICATION Anura DUPLICATION Anura ANCESTRAL SPECIES ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.rb.a #22 ENSGT00940000155405.rb.b #22 ENSGT00940000157461 #24 ENSGT00940000154617.B Frog MODERN SPECIES 3 adal (ENSXETG00000020337) larp6 (ENSXETG00000020340) zdhhc12 (ENSXETG00000024739) lrrc49 (ENSXETG00000020342) thsd4 (ENSXETG00000016384) bmp7.2 (ENSXETG00000016386) chrna7 (ENSXETG00000016395) ENSXETG00000043220 myo1e.1 (ENSXETG00000016402) #24 ENSXETG00000042363 ENSXETG00000048015 ENSXETG00000043724 sltm (ENSXETG00000010840) #20 ENSXETG00000039400 rnf111 (ENSXETG00000010842) #21 ccnb2 (ENSXETG00000010845) #22 mindy2 (ENSXETG00000010848) #19 adam10 (ENSXETG00000010850) #18 lipc (ENSXETG00000032604) #17 ENSXETG00000044321 ENSXETG00000042238 aqp9 (ENSXETG00000010861) #16 aldh1a2 (ENSXETG00000010865) #15 polr2m (ENSXETG00000036763) #13 myzap (ENSXETG00000040770) #12 cgnl1 (ENSXETG00000010876) #11 tcf12 (ENSXETG00000016563) #10 ENSXETG00000040376 ENSXETG00000039109 znf280d (ENSXETG00000016560) mns1 (ENSXETG00000016556) #8 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000006151 POLR2M (ENSLLEG00000006174) #13 ENSLLEG00000006200 ALDH1A2 (ENSLLEG00000006213) #15 ENSLLEG00000006275 AQP9 (ENSLLEG00000006293) #16 ENSLLEG00000006332 ENSLLEG00000006365 LIPC (ENSLLEG00000006398) #17 ENSLLEG00000006525 ADAM10 (ENSLLEG00000006661) #18 ENSLLEG00000008265 MINDY2 (ENSLLEG00000008298) #19 SLTM (ENSLLEG00000008552) #20 RNF111 (ENSLLEG00000009389) #21 ENSLLEG00000009565 #22 ENSLLEG00000009801 ENSLLEG00000009845 #22 MYO1E (ENSLLEG00000010104) #24 TMEM215 (ENSLLEG00000010622) TOPORS (ENSLLEG00000010643) ENSLLEG00000010672 ENSLLEG00000010744 ARPP19 (ENSLLEG00000010920) ATOSA (ENSLLEG00000011009) ENSLLEG00000011333 ENSLLEG00000011351 ONECUT1 (ENSLLEG00000011369) ENSLLEG00000004990 ENSLLEG00000004998 WDR72 (ENSLLEG00000005110) Anura ANCESTRAL SPECIES ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000160582 #16 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000160579 #18 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405.rb.a #22 ENSGT00940000155405.rb.b #22 ENSGT00940000157461 #24 ENSGT00940000154617.B Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000006200 ALDH1A2 (ENSLLEG00000006213) #15 ENSLLEG00000006275 AQP9 (ENSLLEG00000006293) #16 ENSLLEG00000006332 ENSLLEG00000006365 LIPC (ENSLLEG00000006398) #17 ENSLLEG00000006525 ADAM10 (ENSLLEG00000006661) #18 ENSLLEG00000008265 MINDY2 (ENSLLEG00000008298) #19 SLTM (ENSLLEG00000008552) #20 RNF111 (ENSLLEG00000009389) #21 ENSLLEG00000009565 #22 ENSLLEG00000009801 ENSLLEG00000009845 #22 MYO1E (ENSLLEG00000010104) #24 TMEM215 (ENSLLEG00000010622) TOPORS (ENSLLEG00000010643) ENSLLEG00000010672 ENSLLEG00000010744 ARPP19 (ENSLLEG00000010920) ATOSA (ENSLLEG00000011009) ENSLLEG00000011333 ENSLLEG00000011351 ONECUT1 (ENSLLEG00000011369) ENSLLEG00000004990 ENSLLEG00000004998 WDR72 (ENSLLEG00000005110) ENSLLEG00000005323 ENSLLEG00000005339 Anura ANCESTRAL SPECIES ENSGT00940000155405.sb #22 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES ERBIN (ENSLLEG00000003789) SREK1 (ENSLLEG00000003835) ENSLLEG00000003847 ENSLLEG00000003859 ENSLLEG00000003865 ENSLLEG00000003869 MAST4 (ENSLLEG00000003905) CD180 (ENSLLEG00000003942) ENSLLEG00000003951 ENSLLEG00000003956 PIK3R1 (ENSLLEG00000003972) ENSLLEG00000004004 ENSLLEG00000004011 ENSLLEG00000004015 SLC30A5 (ENSLLEG00000004028) ENSLLEG00000004054 #22 ENSLLEG00000004074 ENSLLEG00000004089 CENPH (ENSLLEG00000004101) MRPS36 (ENSLLEG00000004122) CDK7 (ENSLLEG00000004131) SERINC5 (ENSLLEG00000004144) THBS4 (ENSLLEG00000004155) ENSLLEG00000004171 ENSLLEG00000004174 ENSLLEG00000004177 MTX3 (ENSLLEG00000013473) ENSLLEG00000013548 ENSLLEG00000013699 TENT2 (ENSLLEG00000013728) HOMER1 (ENSLLEG00000013917) Leishan spiny toad MODERN SPECIES 833 ENSLLEG00000015686 ENSLLEG00000015726 #22 Coelacanth MODERN SPECIES 695 TCF12 (ENSLACG00000014145) #10 CGNL1 (ENSLACG00000013518) #11 MYZAP (ENSLACG00000012652) #12 ALDH1A2 (ENSLACG00000011494) #15 AQP9 (ENSLACG00000022342) #16 ENSLACG00000010253 LIPC (ENSLACG00000009964) #17 adam10a (ENSLACG00000007565) MINDY2 (ENSLACG00000006574) #19 SLTM (ENSLACG00000005234) #20 RNF111 (ENSLACG00000003109) #21 ccnb2 (ENSLACG00000002466) #22 Actinopterygii ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000164516 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00940000156639 ENSGT00940000157654 ENSGT00390000005250 ENSGT00940000158126 ENSGT00940000157140.a ENSGT00640000091523 Neopterygii ANCESTRAL SPECIES 11 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919 ENSGT00940000166061.a ENSGT00940000157602 #17 ENSGT00940000164516 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00390000004985.b #25 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00390000012336 ENSGT00550000074781 ENSGT00940000160291.d ENSGT00940000163963 ENSGT00390000008240 Osteoglossocephalai ANCESTRAL SPECIES 10 ENSGT00940000176052 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047 #10 ENSGT00940000154489.A #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602 #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943 ENSGT00390000008240 ENSGT00940000163963 ENSGT00940000155164.a.a ENSGT00550000074781 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A ENSGT00530000063675.a ENSGT01040000240503.A.a.a Clupeocephala ANCESTRAL SPECIES 15 ENSGT00940000176052 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047.ac.a #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602 #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00940000163916 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A ENSGT00530000063675.a ENSGT01040000240503.A.a.a.d.a ENSGT00990000204739 ENSGT01040000240503.A.a.a.c ENSGT00950000182957.a.a.b Otomorpha ANCESTRAL SPECIES 73 ENSGT00940000156912.c.a ENSGT00950000182885.A.a.e ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047.bc #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00940000163916 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A ENSGT00530000063675.a ENSGT01040000240503.A.a.a.d.a ENSGT00390000018400.d ENSGT00660000097073 ENSGT00990000204739 Otophysi ANCESTRAL SPECIES 114 ENSGT01030000235224 ENSGT00390000009048.a.a.g ENSGT00390000017828 ENSGT00940000163854.b ENSGT00940000155047.bc #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00940000163916 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A ENSGT00530000063675.a ENSGT01040000240503.A.a.a.c ENSGT00950000182957.a.a.b ENSGT00940000157220.a ENSGT00390000018400.c Characiphysae ANCESTRAL SPECIES 6 ENSGT01030000235224 ENSGT00390000009048.a.a.g ENSGT00390000017828 ENSGT00940000163854.b ENSGT00940000155047.bc #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00940000163916 ENSGT00940000165300.b.a.a.a ENSGT00940000159757 ENSGT00940000165234 ENSGT00940000159836 ENSGT00940000154848.b ENSGT00940000154511.a ENSGT00390000017697.b ENSGT00940000156038.a.a Characiphysae_b ANCESTRAL SPECIES 5 ENSGT01030000235224 ENSGT00390000009048.a.a.g ENSGT00390000017828 ENSGT00940000163854.b ENSGT00940000155047.bc #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00940000163916 ENSGT00940000165300.a ENSGT00940000159757 ENSGT00940000165234 ENSGT00940000159836 ENSGT00940000154848.b ENSGT00390000017697.b ENSGT00940000156038.a.a ENSGT00940000157042.c.b Characoidei ANCESTRAL SPECIES 4 ENSGT01030000235224 ENSGT00390000009048.a.a.g ENSGT00390000017828 ENSGT00940000163854.b ENSGT00940000155047.bc #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781.x ENSGT00550000074781.w ENSGT00940000163916 ENSGT00940000165300.a ENSGT00940000159757 ENSGT00940000165234 ENSGT00940000159836 ENSGT00940000154848.b ENSGT00390000017697.b ENSGT00940000156038.a.a Red-bellied piranha MODERN SPECIES 189 MAP1A (ENSPNAG00000021411) PPIP5K1 (ENSPNAG00000021348) mtfmt (ENSPNAG00000021080) ENSPNAG00000021069 tcf12 (ENSPNAG00000020969) #10 CGNL1 (ENSPNAG00000020821) #11 MYZAP (ENSPNAG00000020797) #12 polr2m (ENSPNAG00000003658) #13 aldh1a2 (ENSPNAG00000020770) #15 aqp9b (ENSPNAG00000020715) lipca (ENSPNAG00000020703) #17 adam10a (ENSPNAG00000020673) MINDY2 (ENSPNAG00000020596) #19 sltm (ENSPNAG00000020563) #20 rnf111 (ENSPNAG00000020539) #21 ccnb2 (ENSPNAG00000020437) #22 MYO1E (ENSPNAG00000020407) #24 Mexicana tetra MODERN SPECIES 46 cart3 (ENSAMXG00000030222) ENSAMXG00000038097 cdkn2aip (ENSAMXG00000025082) tubgcp4 (ENSAMXG00000017984) tp53bp1 (ENSAMXG00000017999) MAP1A (ENSAMXG00000029574) ENSAMXG00000030202 PPIP5K1 (ENSAMXG00000008287) mtfmt (ENSAMXG00000038555) ENSAMXG00000039713 ENSAMXG00000035092 tcf12 (ENSAMXG00000030769) #10 rnf111 (ENSAMXG00000012431) #21 ccnb2 (ENSAMXG00000012440) #22 ENSAMXG00000012455 ENSAMXG00000037707 MYO1E (ENSAMXG00000012478) #24 mtmr10 (ENSAMXG00000011964) mphosph10 (ENSAMXG00000005318) mcee (ENSAMXG00000033887) ENSAMXG00000043929 APBA2 (ENSAMXG00000005296) sord (ENSAMXG00000043919) sord (ENSAMXG00000005287) ca7 (ENSAMXG00000005270) ENSAMXG00000037925 ENSAMXG00000039437 rrad (ENSAMXG00000037769) ciao2b (ENSAMXG00000038216) Electric eel MODERN SPECIES 108 PPIP5K1 (ENSEEEG00000017814) ENSEEEG00000017815 mtfmt (ENSEEEG00000017817) ENSEEEG00000017822 tcf12 (ENSEEEG00000017827) #10 CGNL1 (ENSEEEG00000017837) #11 MYZAP (ENSEEEG00000017838) #12 polr2m (ENSEEEG00000017839) #13 aldh1a2 (ENSEEEG00000017851) #15 aqp9b (ENSEEEG00000018122) lipca (ENSEEEG00000018189) #17 adam10a (ENSEEEG00000018192) MINDY2 (ENSEEEG00000018217) #19 sltm (ENSEEEG00000018219) #20 rnf111 (ENSEEEG00000018220) #21 ccnb2 (ENSEEEG00000018221) #22 MYO1E (ENSEEEG00000018229) #24 mtmr10 (ENSEEEG00000018401) mphosph10 (ENSEEEG00000018436) mcee (ENSEEEG00000018489) APBA2 (ENSEEEG00000018492) sord (ENSEEEG00000018497) ca7 (ENSEEEG00000018563) rrad (ENSEEEG00000018685) ciao2b (ENSEEEG00000018689) ENSEEEG00000018701 LOXL4 (ENSEEEG00000018713) ATL2 (ENSEEEG00000018850) SLC22A31 (ENSEEEG00000019391) ANKRD11 (ENSEEEG00000019392) SPG7 (ENSEEEG00000019401) Channel catfish MODERN SPECIES 19 mtfmt (ENSIPUG00000022976) znf280d (ENSIPUG00000022987) tcf12 (ENSIPUG00000023017) #10 cgnl1 (ENSIPUG00000023094) #11 myzap (ENSIPUG00000023098) #12 polr2m (ENSIPUG00000023112) #13 aldh1a2 (ENSIPUG00000023122) #15 aqp9b (ENSIPUG00000023133) lipca (ENSIPUG00000023135) #17 ADAM10 (ENSIPUG00000023145) fam63b (ENSIPUG00000023190) #19 sltm (ENSIPUG00000023201) #20 ENSIPUG00000023207 ENSIPUG00000023209 RNF111 (ENSIPUG00000023212) #21 ccnb2 (ENSIPUG00000023228) #22 myo1e (ENSIPUG00000023240) #24 ENSIPUG00000023270 mtmr10 (ENSIPUG00000023273) mphosph10 (ENSIPUG00000023294) MCEE (ENSIPUG00000023298) apba2 (ENSIPUG00000023407) sord (ENSIPUG00000023442) ENSIPUG00000023466 ca7 (ENSIPUG00000023469) ENSIPUG00000023479 RRAD (ENSIPUG00000023484) FAM96B (ENSIPUG00000023490) ENSIPUG00000023500 LOXL4 (ENSIPUG00000023503) ATL2 (ENSIPUG00000023517) Cyprinoidei ANCESTRAL SPECIES 3 ENSGT00940000172895 ENSGT00940000156346.c.a.d ENSGT00940000159833 ENSGT00940000165857.a ENSGT00510000048144 ENSGT00940000161170.c ENSGT00940000164082.a.b.b ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00940000163916 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A ENSGT00530000063675.a ENSGT01040000240503.A.a.a.c ENSGT00390000018400.c ENSGT00390000008152.B.b ENSGT00940000156969 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 641 ENSGT00950000183065.D.d #13 ENSGT00940000158898.d.a.a #15 ENSGT00940000164919.b.b ENSGT00940000157602.e.b #17 ENSGT00940000164516.a.a ENSGT00390000016607.a.l #19 ENSGT00940000156573.b #20 ENSGT00940000157691.e #21 ENSGT00940000155405.a #22 ENSGT00940000157461.e.b #24 ENSGT00940000156900.r ENSGT00390000011359.n ENSGT00940000153941.b.f ENSGT00940000158943.c.b ENSGT00550000074781.z Goldfish DUPLICATION Goldfish MODERN SPECIES 25 aldh1a3 (ENSCARG00000036263) asb7 (ENSCARG00000036155) ADAMTS17 (ENSCARG00000035908) MINAR1 (ENSCARG00000035854) mthfs (ENSCARG00000035838) fah (ENSCARG00000035462) ARNT2 (ENSCARG00000035177) aldh1a2 (ENSCARG00000035139) #15 aqp9b (ENSCARG00000035100) adam10a (ENSCARG00000034889) ENSCARG00000034843 #19 sltm (ENSCARG00000034820) #20 rnf111 (ENSCARG00000034772) #21 ENSCARG00000034758 si:dkey-58f10.11 (ENSCARG00000034746) ccnb2 (ENSCARG00000034712) #22 MYO1E (ENSCARG00000034495) #24 ENSCARG00000034448 ZNF536 (ENSCARG00000034400) ENSCARG00000034367 tshz3b (ENSCARG00000034343) DPY19L3 (ENSCARG00000034255) ZNF507 (ENSCARG00000034235) ENSCARG00000034221 syt13 (ENSCARG00000034209) fbxo3 (ENSCARG00000034135) cd59 (ENSCARG00000034110) cdh15 (ENSCARG00000034014) SPG7 (ENSCARG00000032831) ANKRD11 (ENSCARG00000032705) SLC22A31 (ENSCARG00000032690) Goldfish MODERN SPECIES 25 pop4 (ENSCARG00000056005) shcbp1 (ENSCARG00000056081) ENSCARG00000056419 ENSCARG00000056424 uqcrfs1 (ENSCARG00000056432) SEMA4B (ENSCARG00000056456) ENSCARG00000056549 polr2m (ENSCARG00000056592) #13 aldh1a2 (ENSCARG00000056797) #15 aqp9b (ENSCARG00000063679) lipca (ENSCARG00000063720) #17 adam10a (ENSCARG00000063930) MINDY2 (ENSCARG00000065957) #19 sltm (ENSCARG00000065967) #20 rnf111 (ENSCARG00000065980) #21 ccnb2 (ENSCARG00000066013) #22 MYO1E (ENSCARG00000066074) #24 mtmr10 (ENSCARG00000066338) mphosph10 (ENSCARG00000067143) mcee (ENSCARG00000067173) APBA2 (ENSCARG00000067288) ENSCARG00000067832 TJP1 (ENSCARG00000068018) ENTREP2 (ENSCARG00000069419) GOLM2 (ENSCARG00000069428) ctdspl2b (ENSCARG00000069441) eif3jb (ENSCARG00000069450) cilp (ENSCARG00000069457) IGDCC3 (ENSCARG00000069461) IGDCC4 (ENSCARG00000069466) nap1l4b (ENSCARG00000069487) Cyprininae_a ANCESTRAL SPECIES 336 ENSGT00940000164516.a.a ENSGT00390000016607.a.l #19 ENSGT00940000156573.b #20 ENSGT00940000157691.e #21 ENSGT00940000155405.a #22 ENSGT00940000157461.e.b #24 ENSGT00940000156900.r ENSGT00390000011359.n ENSGT00940000153941.b.f ENSGT00940000158943.c.b ENSGT00550000074781.z ENSGT00390000012336.a ENSGT00940000155164.a.b.c ENSGT00530000063335.A.u.b ENSGT00530000063675.a.l ENSGT01040000240503.A.a.a.c.a ENSGT00390000018400.c.b ENSGT00390000008152.B.b.a ENSGT00940000156969.rc ENSGT00940000159637.o Common carp reference MODERN SPECIES 6 ENSCCRG00000040695 tmed3 (ENSCCRG00000073666) si:ch211-107o10.3 (ENSCCRG00000079347) wdr76 (ENSCCRG00000055293) ENSCCRG00000071874 ENSCCRG00000054634 polr2m (ENSCCRG00000004210) #13 aldh1a2 (ENSCCRG00000079174) #15 aqp9b (ENSCCRG00000004218) lipca (ENSCCRG00000004227) #17 adam10a (ENSCCRG00000005104) MINDY2 (ENSCCRG00000010622) #19 sltm (ENSCCRG00000058133) #20 ENSCCRG00000074487 rnf111 (ENSCCRG00000073179) #21 ccnb2 (ENSCCRG00000011816) #22 MYO1E (ENSCCRG00000024799) #24 mtmr10 (ENSCCRG00000029389) mphosph10 (ENSCCRG00000064530) mcee (ENSCCRG00000080275) ENSCCRG00000015086 terb2 (ENSCCRG00000015089) ENSCCRG00000025262 ENSCCRG00000046323 GOLM2 (ENSCCRG00000062777) ctdspl2b (ENSCCRG00000077724) ENSCCRG00000073663 eif3jb (ENSCCRG00000046436) cilp (ENSCCRG00000066636) IGDCC3 (ENSCCRG00000067987) IGDCC4 (ENSCCRG00000046156) Golden-line barbel MODERN SPECIES 195 aqp9b (ENSSGRG00000027882) adam10a (ENSSGRG00000027819) ENSSGRG00000027810 #19 sltm (ENSSGRG00000027704) #20 rnf111 (ENSSGRG00000027667) #21 ccnb2 (ENSSGRG00000027666) #22 MYO1E (ENSSGRG00000026861) #24 mtmr10 (ENSSGRG00000026532) mphosph10 (ENSSGRG00000026523) mcee (ENSSGRG00000026521) APBA2 (ENSSGRG00000026359) sord (ENSSGRG00000026328) ENSSGRG00000026327 terb2 (ENSSGRG00000026326) TJP1 (ENSSGRG00000021735) ENSSGRG00000021690 GOLM2 (ENSSGRG00000021689) ctdspl2b (ENSSGRG00000021561) eif3jb (ENSSGRG00000021556) cilp (ENSSGRG00000021553) IGDCC3 (ENSSGRG00000021548) Cyprininae ANCESTRAL SPECIES 1 ENSGT00940000165857.a.c.a ENSGT00940000165857.a.c.b ENSGT00510000048144.g ENSGT00940000161170.c.b ENSGT00940000154870.D.b.b ENSGT00940000154348.c.b.b.a.b.d ENSGT00940000164082.a.a ENSGT00950000183065.D.c #13 ENSGT00940000158898.d.a.b #15 ENSGT00940000164919.b.a ENSGT00940000157602.e.a #17 ENSGT00940000164516.a.b ENSGT00390000016607.a.k #19 ENSGT00940000156573.a #20 ENSGT00940000157691.f #21 ENSGT00940000155405.b #22 ENSGT00940000157461.e.a #24 ENSGT00940000156900.q ENSGT00390000011359.m ENSGT00940000153941.b.e ENSGT00940000158943.c.a ENSGT00550000074781.y ENSGT00390000012336.b ENSGT00940000155164.a.b.d ENSGT00530000063335.A.v ENSGT00530000063675.a.k ENSGT01040000240503.A.a.a.c.b ENSGT00950000182957.a.a.b.gc ENSGT00390000018400.c.a ENSGT00390000008152.B.b.b ENSGT00940000156969.sc Goldfish MODERN SPECIES 47 tmed3 (ENSCARG00000017600) si:ch211-107o10.3 (ENSCARG00000017607) si:ch211-107o10.3 (ENSCARG00000017616) wdr76 (ENSCARG00000017640) ZNF710 (ENSCARG00000017671) SEMA4B (ENSCARG00000017701) SERF2 (ENSCARG00000017791) polr2m (ENSCARG00000017812) #13 aldh1a2 (ENSCARG00000018091) #15 aqp9b (ENSCARG00000023192) lipca (ENSCARG00000023231) #17 adam10a (ENSCARG00000023608) MINDY2 (ENSCARG00000024401) #19 sltm (ENSCARG00000024427) #20 rnf111 (ENSCARG00000024555) #21 ccnb2 (ENSCARG00000024656) #22 MYO1E (ENSCARG00000024997) #24 mtmr10 (ENSCARG00000031805) ENSCARG00000033266 mphosph10 (ENSCARG00000033287) mcee (ENSCARG00000033411) APBA2 (ENSCARG00000033571) sord (ENSCARG00000036183) terb2 (ENSCARG00000036204) TJP1 (ENSCARG00000036423) ENSCARG00000040474 ENTREP2 (ENSCARG00000040497) ENSCARG00000040617 GOLM2 (ENSCARG00000040640) ctdspl2b (ENSCARG00000040694) ENSCARG00000040766 Cyprininae_a ANCESTRAL SPECIES 2 ENSGT00940000165857.a.c.a ENSGT00510000048144.g ENSGT00940000161170.c.b ENSGT00940000154870.D.b.b ENSGT00940000154348.c.b.b.a.b.d ENSGT00940000164082.a.a ENSGT00950000183065.D.c #13 ENSGT00940000158898.d.a.b #15 ENSGT00940000158898.c #15 ENSGT00940000164919.b.a ENSGT00940000157602.e.a #17 ENSGT00940000164516.a.b ENSGT00390000016607.a.k #19 ENSGT00940000156573.a #20 ENSGT00940000157691.f #21 ENSGT00940000155405.b #22 ENSGT00940000157461.e.a #24 ENSGT00940000156900.q ENSGT00390000011359.m ENSGT00940000153941.b.e ENSGT00940000158943.c.a ENSGT00550000074781.y ENSGT00390000012336.b ENSGT00940000155164.a.b.d ENSGT00530000063335.A.v ENSGT00530000063675.a.k ENSGT01040000240503.A.a.a.c.b ENSGT00950000182957.a.a.b.gc ENSGT00390000018400.c.a ENSGT00390000008152.B.b.b ENSGT00940000156969.sc Common carp reference MODERN SPECIES si:ch211-107o10.3 (ENSCCRG00000080342) si:ch211-107o10.3 (ENSCCRG00000040927) wdr76 (ENSCCRG00000073048) ENSCCRG00000040942 ENSCCRG00000040968 harbi2 (ENSCCRG00000053179) ENSCCRG00000062434 polr2m (ENSCCRG00000040997) #13 aldh1a2 (ENSCCRG00000071215) #15 aqp9b (ENSCCRG00000069561) lipca (ENSCCRG00000049516) #17 adam10a (ENSCCRG00000049562) MINDY2 (ENSCCRG00000059173) #19 sltm (ENSCCRG00000010698) #20 rnf111 (ENSCCRG00000010706) #21 ccnb2 (ENSCCRG00000071996) #22 MYO1E (ENSCCRG00000034708) #24 mtmr10 (ENSCCRG00000034720) mphosph10 (ENSCCRG00000077895) mcee (ENSCCRG00000061291) ENSCCRG00000041297 sord (ENSCCRG00000046309) terb2 (ENSCCRG00000064709) ENSCCRG00000030902 ENSCCRG00000082755 GOLM2 (ENSCCRG00000046343) ctdspl2b (ENSCCRG00000046426) ENSCCRG00000056375 eif3jb (ENSCCRG00000080311) cilp (ENSCCRG00000076695) IGDCC3 (ENSCCRG00000031867) Golden-line barbel MODERN SPECIES 75 tmed3 (ENSSGRG00000034162) si:ch211-107o10.3 (ENSSGRG00000034163) wdr76 (ENSSGRG00000034165) ZNF710 (ENSSGRG00000034166) SEMA4B (ENSSGRG00000034167) harbi2 (ENSSGRG00000034169) ENSSGRG00000034170 polr2m (ENSSGRG00000034171) #13 aldh1a2 (ENSSGRG00000034181) #15 lipca (ENSSGRG00000034777) #17 adam10a (ENSSGRG00000034831) ENSSGRG00000036200 MINDY2 (ENSSGRG00000036205) #19 sltm (ENSSGRG00000036228) #20 rnf111 (ENSSGRG00000036229) #21 ccnb2 (ENSSGRG00000036231) #22 MYO1E (ENSSGRG00000036318) #24 mtmr10 (ENSSGRG00000036412) mphosph10 (ENSSGRG00000036432) mcee (ENSSGRG00000036692) ENSSGRG00000036695 APBA2 (ENSSGRG00000036701) sord (ENSSGRG00000036719) ENSSGRG00000036743 terb2 (ENSSGRG00000036744) TJP1 (ENSSGRG00000036774) ENSSGRG00000039435 ENSSGRG00000039436 ENSSGRG00000039437 Zebrafish MODERN SPECIES 22 tmed3 (ENSDARG00000028816) si:ch211-107o10.3 (ENSDARG00000008491) wdr76 (ENSDARG00000053554) ZNF710 (ENSDARG00000005549) SEMA4B (ENSDARG00000076104) harbi2 (ENSDARG00000028815) serf2b (ENSDARG00000074340) polr2m (ENSDARG00000074968) #13 aldh1a2 (ENSDARG00000053493) #15 aqp9b (ENSDARG00000053480) lipca (ENSDARG00000053476) #17 adam10a (ENSDARG00000053468) mindy2 (ENSDARG00000017431) #19 sltm (ENSDARG00000052728) #20 rnf111 (ENSDARG00000078802) #21 ccnb2 (ENSDARG00000036180) #22 MYO1E (ENSDARG00000036179) #24 mtmr10 (ENSDARG00000010601) mphosph10 (ENSDARG00000012495) mcee (ENSDARG00000045428) APBA2 (ENSDARG00000060639) sord (ENSDARG00000053405) ENSDARG00000105548 terb2 (ENSDARG00000039477) TJP1 (ENSDARG00000077506) ENTREP2 (ENSDARG00000053380) ENSDARG00000109937 GOLM2 (ENSDARG00000074490) ctdspl2b (ENSDARG00000060586) ENSDARG00000079336 eif3jb (ENSDARG00000053370) Clupeiformes ANCESTRAL SPECIES 64 ENSGT00940000158805.a ENSGT00940000156912.c.a ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047.ac.a #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602.e #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.c ENSGT00550000074781 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A ENSGT00530000063675.a ENSGT01040000240503.A.a.a.d.a.b ENSGT00990000204739 ENSGT00950000182957.a.a.b ENSGT00390000018400.c ENSGT00390000008152.B.b Denticle herring MODERN SPECIES 7 dnaaf4 (ENSDCDG00000034405) ENSDCDG00000034400 ENSDCDG00000034398 pigb (ENSDCDG00000034390) rab27a (ENSDCDG00000034381) UNC13C (ENSDCDG00000033157) onecut1 (ENSDCDG00000033074) MYZAP (ENSDCDG00000033072) #12 polr2m (ENSDCDG00000033070) #13 aldh1a2 (ENSDCDG00000031371) #15 aqp9b (ENSDCDG00000031264) adam10a (ENSDCDG00000029942) MINDY2 (ENSDCDG00000029905) #19 sltm (ENSDCDG00000029895) #20 rnf111 (ENSDCDG00000029884) #21 ccnb2 (ENSDCDG00000029879) #22 MYO1E (ENSDCDG00000028046) #24 mtmr10 (ENSDCDG00000027611) mphosph10 (ENSDCDG00000027577) mcee (ENSDCDG00000027571) APBA2 (ENSDCDG00000027276) TJP1 (ENSDCDG00000027118) ENTREP2 (ENSDCDG00000027109) GOLM2 (ENSDCDG00000027107) CTDSPL2 (ENSDCDG00000027086) ENSDCDG00000027084 eif3jb (ENSDCDG00000027083) cilp (ENSDCDG00000027081) IGDCC3 (ENSDCDG00000026980) IGDCC4 (ENSDCDG00000026976) SCAMP5 (ENSDCDG00000026970) Atlantic herring MODERN SPECIES 12 ENSCHAG00000011694 ENSCHAG00000011701 spon2b (ENSCHAG00000011706) zgc:136929 (ENSCHAG00000011734) BRCC3 (ENSCHAG00000012002) maea (ENSCHAG00000012183) uvssa (ENSCHAG00000012252) nkx1.2lb (ENSCHAG00000012264) ENSCHAG00000012281 ENSCHAG00000012296 ENSCHAG00000012311 ENSCHAG00000012362 #19 ENSCHAG00000012390 ENSCHAG00000012410 #20 rnf111 (ENSCHAG00000012427) #21 ccnb2 (ENSCHAG00000012731) #22 MYO1E (ENSCHAG00000012807) #24 ENSCHAG00000012906 ENSCHAG00000012914 ENSCHAG00000012926 fgfrl1b (ENSCHAG00000012943) FBXO38 (ENSCHAG00000013026) csnk1a1 (ENSCHAG00000013177) ENSCHAG00000013324 ENSCHAG00000013344 SIL1 (ENSCHAG00000013374) spdl1 (ENSCHAG00000013386) ENSCHAG00000013478 ENSCHAG00000013489 ENSCHAG00000013680 ENSCHAG00000013699 Euteleosteomorpha ANCESTRAL SPECIES 48 ENSGT00940000176052 ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047.ac.a #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000157602 #17 ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000005939.b ENSGT00940000159421 ENSGT00950000182838.B.a.a ENSGT00970000193520 ENSGT00940000159841 ENSGT00950000183102.A.b.b ENSGT00550000074994 ENSGT00940000157410 ENSGT00940000165027 ENSGT00940000157965.c ENSGT00940000156149.B ENSGT00390000012700 ENSGT00940000156898 Acanthomorphata ANCESTRAL SPECIES 139 ENSGT00950000182839.B.b.a ENSGT00950000183205.a ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 Euacanthomorphacea ANCESTRAL SPECIES 84 ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e ENSGT01030000235215 ENSGT00940000155010.a ENSGT00940000156563.a Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01010000230193 ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e ENSGT01030000235215 ENSGT00940000155010.a Ovalentaria ANCESTRAL SPECIES 17 ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Cichlidae ANCESTRAL SPECIES 40 ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 Pseudocrenilabrinae ANCESTRAL SPECIES 28 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000155333.A.a.d.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00920000150778 ENSGT01050000244942.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 32 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00920000150778 ENSGT01050000244942.a ENSGT00940000159159 Haplochromini ANCESTRAL SPECIES 34 ENSGT00940000157661.e.b.e ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00920000150778 ENSGT01050000244942.a ENSGT00940000159159 Burton s mouthbrooder MODERN SPECIES 792 ENSHBUG00000014328 ENSHBUG00000014312 CTTN (ENSHBUG00000014301) ppfia1 (ENSHBUG00000014217) ENSHBUG00000013852 arfgap2 (ENSHBUG00000013839) pex16 (ENSHBUG00000013764) cars1 (ENSHBUG00000013664) ccnb2 (ENSHBUG00000013482) #22 lctla (ENSHBUG00000013442) Haplochromini_A ANCESTRAL SPECIES 39 ENSGT00940000157661.e.b.e ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764.r ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00920000150778 ENSGT01050000244942.a ENSGT00940000159159 Haplochromini_B ANCESTRAL SPECIES 56 ENSGT00940000157661.e.b.e ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b Zebra mbuna MODERN SPECIES 1091 ENSMZEG00005016643 BRSK2 (ENSMZEG00005016650) ENSMZEG00005016671 rdh14a (ENSMZEG00005016676) ENSMZEG00005016685 guca1g (ENSMZEG00005016688) ENSMZEG00005016700 ENSMZEG00005016723 SHANK2 (ENSMZEG00005016728) CTTN (ENSMZEG00005016735) ppfia1 (ENSMZEG00005016744) ENSMZEG00005016762 arfgap2 (ENSMZEG00005016778) pex16 (ENSMZEG00005016810) cars1 (ENSMZEG00005016834) ccnb2 (ENSMZEG00005016859) #22 crybgx (ENSMZEG00005016862) lctla (ENSMZEG00005016870) npsn (ENSMZEG00005016894) ENSMZEG00005016898 STARD5 (ENSMZEG00005016903) ENSMZEG00005016917 ENSMZEG00005016921 pole3 (ENSMZEG00005016930) kmt5b (ENSMZEG00005016943) cd82a (ENSMZEG00005016958) HERC1 (ENSMZEG00005016974) ENSMZEG00005017030 ENSMZEG00005017035 dapk2a (ENSMZEG00005017043) ENSMZEG00005017054 Eastern happy MODERN SPECIES ENSACLG00000003624 BRSK2 (ENSACLG00000003501) rassf7b (ENSACLG00000003005) rdh14a (ENSACLG00000003000) ENSACLG00000002978 guca1g (ENSACLG00000002954) ENSACLG00000002620 ENSACLG00000002570 SHANK2 (ENSACLG00000002556) CTTN (ENSACLG00000002506) ppfia1 (ENSACLG00000002291) ENSACLG00000002271 arfgap2 (ENSACLG00000002202) pex16 (ENSACLG00000002118) cars1 (ENSACLG00000001993) ccnb2 (ENSACLG00000001980) #22 crybgx (ENSACLG00000001945) lctla (ENSACLG00000001883) ENSACLG00000001865 ENSACLG00000001862 ENSACLG00000001812 rab11a (ENSACLG00000001775) ENSACLG00000001756 dapk2a (ENSACLG00000001586) HERC1 (ENSACLG00000001328) cd82a (ENSACLG00000001316) kmt5b (ENSACLG00000001197) pole3 (ENSACLG00000001171) TMC3 (ENSACLG00000001076) STARD5 (ENSACLG00000001028) ENSACLG00000001020 P. nyererei MODERN SPECIES 495 BRSK2 (ENSPNYG00000009547) ENSPNYG00000009534 rdh14a (ENSPNYG00000009530) ENSPNYG00000009504 guca1g (ENSPNYG00000009478) ENSPNYG00000009392 ENSPNYG00000009355 ENSPNYG00000009319 ENSPNYG00000009307 CTTN (ENSPNYG00000009291) ppfia1 (ENSPNYG00000009231) ENSPNYG00000009215 arfgap2 (ENSPNYG00000009178) pex16 (ENSPNYG00000009118) cars1 (ENSPNYG00000009008) ccnb2 (ENSPNYG00000008956) #22 crybgx (ENSPNYG00000008928) lctla (ENSPNYG00000008886) Lyretail cichlid MODERN SPECIES 507 ENSNBRG00000016141 ENSNBRG00000016179 ENSNBRG00000016198 ENSNBRG00000016258 ENSNBRG00000016271 ppfia1 (ENSNBRG00000016292) arfgap2 (ENSNBRG00000016368) pex16 (ENSNBRG00000016393) ENSNBRG00000016417 ccnb2 (ENSNBRG00000016430) #22 crybgx (ENSNBRG00000016448) lctla (ENSNBRG00000016496) Nile tilapia MODERN SPECIES TLNRD1 (ENSONIG00000007320) mtch2 (ENSONIG00000007321) ENSONIG00000038545 tollip (ENSONIG00000008316) ENSONIG00000008311 ENSONIG00000028129 ENSONIG00000027350 ppfia1 (ENSONIG00000015649) ENSONIG00000040534 ENSONIG00000015659 arfgap2 (ENSONIG00000015660) ENSONIG00000030524 pex16 (ENSONIG00000015670) ENSONIG00000028006 cars1 (ENSONIG00000015673) ccnb2 (ENSONIG00000015677) #22 crybgx (ENSONIG00000015680) lctla (ENSONIG00000015683) tipin (ENSONIG00000029040) dis3l (ENSONIG00000015695) ENSONIG00000042241 SHANK2 (ENSONIG00000039450) ENSONIG00000015636 guca1g (ENSONIG00000033758) ENSONIG00000030957 rdh14a (ENSONIG00000015633) ENSONIG00000036551 BRSK2 (ENSONIG00000015626) ABTB2 (ENSONIG00000015618) ENSONIG00000015616 ENSONIG00000015615 Midas cichlid MODERN SPECIES 844 fgf4 (ENSACIG00000002347) fgf3 (ENSACIG00000002356) lto1 (ENSACIG00000002375) ccnd1 (ENSACIG00000002470) vstm2b (ENSACIG00000002484) uqcrfs1 (ENSACIG00000002502) rasl12 (ENSACIG00000002516) KBTBD13 (ENSACIG00000002547) pdcd7 (ENSACIG00000002556) ENSACIG00000002605 cars1 (ENSACIG00000002614) crybgx (ENSACIG00000002669) lctla (ENSACIG00000002686) pole3 (ENSACIG00000002711) kmt5b (ENSACIG00000002725) ccnb2 (ENSACIG00000002751) #22 cd82a (ENSACIG00000002769) tspan18a (ENSACIG00000002818) HERC1 (ENSACIG00000002866) dapk2a (ENSACIG00000003048) ENSACIG00000003069 rab11a (ENSACIG00000003092) ENSACIG00000003103 dis3l (ENSACIG00000003161) tipin (ENSACIG00000003205) TMC3 (ENSACIG00000003243) ENSACIG00000003308 Pomacentridae ANCESTRAL SPECIES 15 ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00940000155491.d ENSGT00940000159422.a.b ENSGT00940000155399.a ENSGT00550000074827.gb ENSGT00940000158086.b ENSGT00940000155524.f ENSGT00390000006548.a.a ENSGT00940000155628.ab ENSGT00940000155889.c ENSGT00940000156684.o.b ENSGT00940000158166 ENSGT00940000156476.g ENSGT00940000154905.i.a Pomacentridae_A ANCESTRAL SPECIES 161 ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00940000155491.d ENSGT00940000159422.a.b ENSGT00940000155399.a ENSGT00550000074827.gb ENSGT00940000158086.b ENSGT00940000155524.f ENSGT00390000006548.a.a ENSGT00940000155628.ab ENSGT00940000155889.c ENSGT00940000156684.o.b ENSGT00940000158166 ENSGT00940000156476.g ENSGT00940000154905.i.a Amphiprion ANCESTRAL SPECIES 88 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00940000155491.d ENSGT00940000159422.a.b ENSGT00940000155399.a ENSGT00550000074827.gb ENSGT00940000158086.b ENSGT00940000155524.f Clown anemonefish MODERN SPECIES 3603 kif23 (ENSAOCG00000003685) paqr5a (ENSAOCG00000003704) glceb (ENSAOCG00000003715) arfgap2 (ENSAOCG00000003742) pex16 (ENSAOCG00000003768) cars1 (ENSAOCG00000003813) ccnb2 (ENSAOCG00000002382) #22 crybgx (ENSAOCG00000003835) lctla (ENSAOCG00000003849) ENSAOCG00000003876 CRABP1 (ENSAOCG00000003883) slc25a44b (ENSAOCG00000003890) PSMA4 (ENSAOCG00000003905) rbpms2a (ENSAOCG00000000105) cpeb1b (ENSAOCG00000000107) polr3a (ENSAOCG00000003949) QRFPR (ENSAOCG00000003958) Orange clownfish MODERN SPECIES map2k5 (ENSAPEG00000000578) ENSAPEG00000000686 skor1a (ENSAPEG00000000759) PIAS1 (ENSAPEG00000000768) ENSAPEG00000000820 ENSAPEG00000000905 UACA (ENSAPEG00000000937) TLE3 (ENSAPEG00000000988) kif23 (ENSAPEG00000001068) paqr5a (ENSAPEG00000001179) glceb (ENSAPEG00000001226) arfgap2 (ENSAPEG00000001255) pex16 (ENSAPEG00000001278) cars1 (ENSAPEG00000001363) ENSAPEG00000001429 ccnb2 (ENSAPEG00000001449) #22 crybgx (ENSAPEG00000001473) lctla (ENSAPEG00000001509) ENSAPEG00000001542 ENSAPEG00000001549 CRABP1 (ENSAPEG00000001621) cmc1 (ENSAPEG00000001643) slc25a44b (ENSAPEG00000001657) PSMA4 (ENSAPEG00000001679) rbpms2a (ENSAPEG00000001705) cpeb1b (ENSAPEG00000001756) polr3a (ENSAPEG00000001966) ENSAPEG00000002071 itga11a (ENSAPEG00000002166) CORO2B (ENSAPEG00000002500) anp32a (ENSAPEG00000002578) Spiny chromis MODERN SPECIES 1766 arfgap2 (ENSAPOG00000009666) pex16 (ENSAPOG00000009733) cars1 (ENSAPOG00000009873) ccnb2 (ENSAPOG00000009899) #22 crybgx (ENSAPOG00000009932) lctla (ENSAPOG00000009988) ENSAPOG00000010067 Bicolor damselfish MODERN SPECIES 1439 ENSSPAG00000001407 arfgap2 (ENSSPAG00000001417) pex16 (ENSSPAG00000001554) cars1 (ENSSPAG00000001606) ccnb2 (ENSSPAG00000001756) #22 crybgx (ENSSPAG00000001774) lctla (ENSSPAG00000001793) ENSSPAG00000001831 CRABP1 (ENSSPAG00000001915) slc25a44b (ENSSPAG00000001928) PSMA4 (ENSSPAG00000001953) rbpms2a (ENSSPAG00000001979) Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000162283.b ENSGT00940000154257.b #29 ENSGT00940000160522.c.b #28 ENSGT00390000014572 ENSGT00940000157136.a ENSGT00940000159860.f ENSGT01030000234838 ENSGT00940000156618.c.b ENSGT01030000234597.a.b.a.a ENSGT00950000183172.C ENSGT01030000234633.A.a.a ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT01060000249384 ENSGT00940000154914 ENSGT00940000155333.A.a ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00390000017790 Oryzias ANCESTRAL SPECIES 51 ENSGT00940000157816.a.b ENSGT00940000159716 ENSGT00940000159191 ENSGT00940000153875.d.b ENSGT00940000155024.a.b.d ENSGT00940000159286.b ENSGT00940000153216.a.a.c.a ENSGT00940000153216.a.a.c.b.h ENSGT00940000154258.b ENSGT00950000183083.a.d.a #32 ENSGT01030000234633.A.a.a ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d Oryzias_b ANCESTRAL SPECIES 81 ENSGT00940000160333 ENSGT00530000062962.b.a.e ENSGT01030000234532.B.e.b.e ENSGT00940000155836.B ENSGT00390000013481.c.a ENSGT00390000002030 ENSGT00940000166202 ENSGT00940000153875.d.b ENSGT00940000155024.a.b.d ENSGT00940000153216.a.a.c.a ENSGT00940000153216.a.a.c.b.h ENSGT00940000154258.b ENSGT00950000183083.a.d.a #32 ENSGT01030000234633.A.a.a ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e ENSGT00390000001014.`b.a ENSGT00940000161629.a ENSGT00390000008092.b.a.b ENSGT00390000017392 Indian medaka MODERN SPECIES 26 ENSOMEG00000002907 ENSOMEG00000002913 mtch2 (ENSOMEG00000002928) npsn (ENSOMEG00000002945) ENSOMEG00000002963 ENSOMEG00000002974 ano1a (ENSOMEG00000003000) ENSOMEG00000003019 zgc:153993 (ENSOMEG00000003033) fgf19 (ENSOMEG00000003048) fgf4 (ENSOMEG00000003060) fgf3 (ENSOMEG00000000784) lto1 (ENSOMEG00000003119) ENSOMEG00000003183 kmt5b (ENSOMEG00000003244) ccnb2 (ENSOMEG00000003281) #22 cd82a (ENSOMEG00000003303) pole3 (ENSOMEG00000003317) rpl12 (ENSOMEG00000003330) ENSOMEG00000003350 e2f8 (ENSOMEG00000003361) NAV2 (ENSOMEG00000003514) dbx1a (ENSOMEG00000003559) ENSOMEG00000003567 htatip2 (ENSOMEG00000003594) prmt3 (ENSOMEG00000003641) slc6a5 (ENSOMEG00000003689) NELL1 (ENSOMEG00000003767) lrp4 (ENSOMEG00000003967) ENSOMEG00000004083 ENSOMEG00000004105 Javanese ricefish MODERN SPECIES 17 gch1 (ENSOJAG00000001275) wdhd1 (ENSOJAG00000001255) socs4 (ENSOJAG00000001249) tppp3 (ENSOJAG00000001244) ENSOJAG00000001238 trpm1a (ENSOJAG00000001224) ENSOJAG00000001203 ENSOJAG00000001193 ENSOJAG00000001189 ENSOJAG00000001186 ctrb.3 (ENSOJAG00000001170) ctrb.2 (ENSOJAG00000001162) ENSOJAG00000001150 ENSOJAG00000000827 kmt5b (ENSOJAG00000000820) ccnb2 (ENSOJAG00000000817) #22 cd82a (ENSOJAG00000000806) pole3 (ENSOJAG00000000804) rpl12 (ENSOJAG00000000797) KCNG4 (ENSOJAG00000000784) uqcrfs1 (ENSOJAG00000000773) KBTBD13 (ENSOJAG00000000767) ENSOJAG00000000757 PDCD7 (ENSOJAG00000000752) zdhhc1 (ENSOJAG00000000742) hsd11b2 (ENSOJAG00000000729) ENSOJAG00000000705 ENSOJAG00000000696 ccnd1 (ENSOJAG00000000683) lto1 (ENSOJAG00000000672) fgf3 (ENSOJAG00000000659) Oryzias_a ANCESTRAL SPECIES 63 ENSGT00940000153875.d.b ENSGT00940000155024.a.b.d ENSGT00940000159286.b ENSGT00940000157017.b ENSGT00940000153216.a.a.c.a ENSGT00940000153216.a.a.c.b.h ENSGT00940000154258.b ENSGT00950000183083.a.d.a #32 ENSGT01030000234633.A.a.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00390000001014.`b.a ENSGT00940000160167 ENSGT00940000161629.a ENSGT00390000008092.b.a.b ENSGT00390000017392 Japanese Medaka HdrR MODERN SPECIES 17 ENSORLG00000000365 ENSORLG00000000371 ctrb.3 (ENSORLG00000025188) ctrb.1 (ENSORLG00000000391) ENSORLG00000000398 ENSORLG00000029522 #32 ENSORLG00000000514 #32 ENSORLG00000000542 GABARAPL2 (ENSORLG00000023154) ENSORLG00000027300 ENSORLG00000021829 ENSORLG00000000553 rpl12 (ENSORLG00000000565) ENSORLG00000000576 kmt5b (ENSORLG00000000600) ccnb2 (ENSORLG00000000615) #22 ENSORLG00000000626 uqcrfs1 (ENSORLG00000030309) rasl12 (ENSORLG00000000642) KBTBD13 (ENSORLG00000000645) ENSORLG00000022494 pdcd7 (ENSORLG00000000656) ENSORLG00000024579 ENSORLG00000026583 ENSORLG00000026435 ENSORLG00000026176 ENSORLG00000030602 ENSORLG00000022554 ENSORLG00000000708 ENSORLG00000022721 mpped2a (ENSORLG00000000727) Chinese medaka MODERN SPECIES 514 ENSOSIG00000000551 kmt5b (ENSOSIG00000000544) ccnb2 (ENSOSIG00000000536) #22 ENSOSIG00000000533 uqcrfs1 (ENSOSIG00000000532) KBTBD13 (ENSOSIG00000000531) ENSOSIG00000000530 PDCD7 (ENSOSIG00000000528) mpped2a (ENSOSIG00000000520) zdhhc13 (ENSOSIG00000000262) csrp3 (ENSOSIG00000000204) e2f8 (ENSOSIG00000000180) Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00940000154257.b #29 ENSGT00940000160522.c.b #28 ENSGT00390000014572 ENSGT00940000157136.a ENSGT00940000159860.f ENSGT01030000234838 ENSGT00940000156618.c.b ENSGT01030000234597.a.b.a.a ENSGT00950000183172.C ENSGT01030000234633.A.a.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT01060000249384 ENSGT00940000154914 ENSGT00940000155333.A.a ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00390000017790 Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00390000014572 ENSGT00940000157136.a ENSGT00940000159860.f ENSGT01030000234838 ENSGT00940000156618.c.b ENSGT01030000234597.a.b.a.a ENSGT00950000183172.C ENSGT01030000234633.A.a.a ENSGT00940000166375 ENSGT00940000159150 ENSGT00940000155010.a ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT01060000249384 ENSGT00940000154914 ENSGT00940000155333.A.a ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00390000017790 Poeciliinae ANCESTRAL SPECIES 35 ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a.c ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000166375 ENSGT00940000159150 Poecilia ANCESTRAL SPECIES 4 ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.eb ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a.c ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000159150 ENSGT00940000155010.a NAME_6 ANCESTRAL SPECIES 157 ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.eb ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a.c ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 Amazon molly MODERN SPECIES 522 ENSPFOG00000018140 ENSPFOG00000018127 ENSPFOG00000023350 SHANK2 (ENSPFOG00000018026) CTTN (ENSPFOG00000017981) ppfia1 (ENSPFOG00000017857) ENSPFOG00000017827 ENSPFOG00000024362 ENSPFOG00000024837 ENSPFOG00000017817 ENSPFOG00000022719 ENSPFOG00000022358 arfgap2 (ENSPFOG00000017810) pex16 (ENSPFOG00000017774) cars1 (ENSPFOG00000017710) ccnb2 (ENSPFOG00000017659) #22 crybgx (ENSPFOG00000017644) lctla (ENSPFOG00000017589) tipin (ENSPFOG00000017558) dis3l (ENSPFOG00000017504) ENSPFOG00000017485 Sailfin molly MODERN SPECIES 150 ENSPLAG00000016776 CTTN (ENSPLAG00000016804) ppfia1 (ENSPLAG00000016939) ENSPLAG00000016957 ENSPLAG00000016962 arfgap2 (ENSPLAG00000016994) pex16 (ENSPLAG00000017043) ENSPLAG00000017063 cars1 (ENSPLAG00000017097) ccnb2 (ENSPLAG00000017104) #22 crybgx (ENSPLAG00000017115) lctla (ENSPLAG00000017147) tipin (ENSPLAG00000017154) dis3l (ENSPLAG00000017167) ENSPLAG00000017185 Platyfish MODERN SPECIES 18 ENSXMAG00000013779 ENSXMAG00000025723 SHANK2 (ENSXMAG00000013801) CTTN (ENSXMAG00000013851) ppfia1 (ENSXMAG00000013883) ENSXMAG00000029728 ENSXMAG00000002822 ENSXMAG00000027729 ENSXMAG00000024033 ENSXMAG00000028478 arfgap2 (ENSXMAG00000014012) pex16 (ENSXMAG00000014054) ENSXMAG00000026369 ENSXMAG00000027007 ENSXMAG00000014089 ccnb2 (ENSXMAG00000014222) #22 ENSXMAG00000014300 BRSK2 (ENSXMAG00000013347) ENSXMAG00000029426 ENSXMAG00000024041 ENSXMAG00000005760 ENSXMAG00000027318 ENSXMAG00000026811 ENSXMAG00000029872 large2 (ENSXMAG00000000708) ENSXMAG00000018442 #31 zgc:194679 (ENSXMAG00000029680) zgc:194679 (ENSXMAG00000019967) MATCAP1 (ENSXMAG00000018435) csnk2a2a (ENSXMAG00000018419) ZNF319 (ENSXMAG00000018417) NAME_4 ANCESTRAL SPECIES 189 ENSGT00940000166375 ENSGT00940000159150 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000169428 ENSGT00940000171177 ENSGT00980000198667 ENSGT00940000177441 ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 ENSGT00940000155333.A.a ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 Mummichog MODERN SPECIES 2450 kmt5b (ENSFHEG00000020073) ccnb2 (ENSFHEG00000020062) #22 cd82a (ENSFHEG00000020049) TSPAN18 (ENSFHEG00000019916) ENSFHEG00000019840 ENSFHEG00000019825 ENSFHEG00000019811 ENSFHEG00000019784 ENSFHEG00000019750 ENSFHEG00000019737 ENSFHEG00000019717 dapk2a (ENSFHEG00000019702) ENSFHEG00000019681 rab11a (ENSFHEG00000019668) ENSFHEG00000019649 ENSFHEG00000019580 nme6 (ENSFHEG00000019568) Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 226 lrp3 (ENSCVAG00000001338) slc7a10a (ENSCVAG00000023322) rhpn2 (ENSCVAG00000023287) cep89 (ENSCVAG00000023276) zgc:165481 (ENSCVAG00000023263) ABCC12 (ENSCVAG00000023256) ENSCVAG00000023155 ENSCVAG00000023122 ENSCVAG00000022997 SLCO3A1 (ENSCVAG00000022977) ENSCVAG00000022953 KCNG4 (ENSCVAG00000022911) rpl12 (ENSCVAG00000022902) pole3 (ENSCVAG00000022885) kmt5b (ENSCVAG00000022875) ccnb2 (ENSCVAG00000022861) #22 cd82a (ENSCVAG00000022849) TSPAN18 (ENSCVAG00000022839) ENSCVAG00000022762 ENSCVAG00000022749 ENSCVAG00000022723 ENSCVAG00000022703 ENSCVAG00000022696 ENSCVAG00000022679 ENSCVAG00000022665 dapk2a (ENSCVAG00000022652) Sheepshead minnow MODERN SPECIES 428 CHMP6 (ENSCVAG00000013448) ccnb2 (ENSCVAG00000013463) #22 ENSCVAG00000013564 KANSL1 (ENSCVAG00000013590) ENSCVAG00000013676 lrrc59 (ENSCVAG00000013693) nat9 (ENSCVAG00000013699) ENSCVAG00000013721 ENSCVAG00000013724 zgc:112285 (ENSCVAG00000013737) timm23a (ENSCVAG00000013769) qki2 (ENSCVAG00000013803) prph2a (ENSCVAG00000013820) tbcc (ENSCVAG00000013831) BICRAL (ENSCVAG00000013844) ENSCVAG00000013870 n4bp1 (ENSCVAG00000013900) Aplocheiloidei ANCESTRAL SPECIES 146 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000175971 ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000166122 ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT01010000230193 Mangrove rivulus MODERN SPECIES 645 ccnb2 (ENSKMAG00000013007) #22 cd82a (ENSKMAG00000012976) cars1 (ENSKMAG00000012871) ENSKMAG00000012827 Turquoise killifish MODERN SPECIES 1616 dpep1 (ENSNFUG00015017308) SLC22A31 (ENSNFUG00015017299) ANKRD11 (ENSNFUG00015017283) SPG7 (ENSNFUG00015014730) cdh15 (ENSNFUG00015014522) ENSNFUG00015014504 ENSNFUG00015014325 SHANK2 (ENSNFUG00015014285) CTTN (ENSNFUG00015014016) ppfia1 (ENSNFUG00015010516) ENSNFUG00015010316 ENSNFUG00015010302 ENSNFUG00015010288 arfgap2 (ENSNFUG00015010223) PEX16 (ENSNFUG00015010190) CCNB2 (ENSNFUG00015009080) #22 cd82a (ENSNFUG00015009058) tspan18a (ENSNFUG00015009010) ENSNFUG00015006967 RASGRF1 (ENSNFUG00015006520) OLA.11922 (ENSNFUG00015006420) idh2 (ENSNFUG00015005613) ENSNFUG00015005475 ZNF710 (ENSNFUG00015005470) GPN1 (ENSNFUG00015005389) stmn4l (ENSNFUG00015005339) il17a/f1 (ENSNFUG00015005322) ENSNFUG00015005295 gtf2a2 (ENSNFUG00015005283) FOXB1 (ENSNFUG00015005277) #28 anxa2b (ENSNFUG00015005270) #29 Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 ENSGT00940000155333.A.a.h ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00390000017790 ENSGT00940000155568.l Carangaria ANCESTRAL SPECIES 11 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 ENSGT00940000155333.A.a.h ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00390000017790 ENSGT00940000155568.l Carangaria_A ANCESTRAL SPECIES 19 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 ENSGT00940000155333.A.a.h ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 100 ENSLCAG00010004275 ZNF319 (ENSLCAG00010004277) csnk2a2a (ENSLCAG00010004282) MATCAP1 (ENSLCAG00010004294) zgc:194679 (ENSLCAG00010004295) ENSLCAG00010004297 zgc:194679 (ENSLCAG00010004301) ENSLCAG00010004303 GABARAPL2 (ENSLCAG00010004310) ENSLCAG00010004321 ENSLCAG00010004337 ENSLCAG00010004346 rpl12 (ENSLCAG00010004367) pole3 (ENSLCAG00010004399) kmt5b (ENSLCAG00010004407) ccnb2 (ENSLCAG00010004421) #22 crybgx (ENSLCAG00010004435) lctla (ENSLCAG00010004446) tipin (ENSLCAG00010004459) dis3l (ENSLCAG00010004501) ENSLCAG00010004683 rab11a (ENSLCAG00010004697) ENSLCAG00010004701 dapk2a (ENSLCAG00010004706) ENSLCAG00010004716 TSPAN18 (ENSLCAG00010004718) cd82a (ENSLCAG00010004720) ccnb2 (ENSLCAG00010004723) #22 cars1 (ENSLCAG00010004799) pex16 (ENSLCAG00010005280) arfgap2 (ENSLCAG00010005307) Barramundi perch MODERN SPECIES 100 hsd11b2 (ENSLCAG00010007090) zdhhc1 (ENSLCAG00010007088) tppp3 (ENSLCAG00010007080) ENSLCAG00010007075 ENSLCAG00010007051 trpm1a (ENSLCAG00010006810) galr1b (ENSLCAG00010006750) ENSLCAG00010006746 VPS13C (ENSLCAG00010005593) #32 shcbp1 (ENSLCAG00010005362) mtfmt (ENSLCAG00010005345) celf1 (ENSLCAG00010005339) arfgap2 (ENSLCAG00010005307) pex16 (ENSLCAG00010005280) cars1 (ENSLCAG00010004799) ccnb2 (ENSLCAG00010004723) #22 cd82a (ENSLCAG00010004720) TSPAN18 (ENSLCAG00010004718) ENSLCAG00010004716 dapk2a (ENSLCAG00010004706) ENSLCAG00010004701 rab11a (ENSLCAG00010004697) ENSLCAG00010004683 dis3l (ENSLCAG00010004501) tipin (ENSLCAG00010004459) lctla (ENSLCAG00010004446) crybgx (ENSLCAG00010004435) ccnb2 (ENSLCAG00010004421) #22 kmt5b (ENSLCAG00010004407) pole3 (ENSLCAG00010004399) rpl12 (ENSLCAG00010004367) Seriola ANCESTRAL SPECIES 30 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000171177 ENSGT00980000198667 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a ENSGT00940000159819 ENSGT00940000157859.a.a ENSGT00400000022240 ENSGT00940000154617.B.c ENSGT00390000005300 Greater amberjack MODERN SPECIES 3 sirt3 (ENSSDUG00000019866) psmd13 (ENSSDUG00000019878) ENSSDUG00000019920 ZNF319 (ENSSDUG00000019932) csnk2a2a (ENSSDUG00000019939) MATCAP1 (ENSSDUG00000019964) zgc:194679 (ENSSDUG00000019991) ENSSDUG00000019995 ENSSDUG00000020005 GABARAPL2 (ENSSDUG00000020014) ENSSDUG00000020031 KCNG4 (ENSSDUG00000020040) rpl12 (ENSSDUG00000020052) pole3 (ENSSDUG00000020085) kmt5b (ENSSDUG00000020097) ccnb2 (ENSSDUG00000020128) #22 cd82a (ENSSDUG00000020277) tspan18a (ENSSDUG00000020293) HERC1 (ENSSDUG00000020323) glceb (ENSSDUG00000020455) anp32a (ENSSDUG00000020495) CORO2B (ENSSDUG00000000059) itga11a (ENSSDUG00000000114) ENSSDUG00000000131 ADAMTS7 (ENSSDUG00000000146) calml4a (ENSSDUG00000000158) ENSSDUG00000000170 chrna7a (ENSSDUG00000000208) trip4 (ENSSDUG00000000225) ENSSDUG00000000248 ENSSDUG00000000263 Yellowtail amberjack MODERN SPECIES 2787 sirt3 (ENSSLDG00000024345) psmd13 (ENSSLDG00000024316) ENSSLDG00000024300 ZNF319 (ENSSLDG00000024295) csnk2a2a (ENSSLDG00000024279) MATCAP1 (ENSSLDG00000024257) zgc:194679 (ENSSLDG00000024252) ENSSLDG00000024247 ENSSLDG00000024241 GABARAPL2 (ENSSLDG00000024233) ENSSLDG00000024230 KCNG4 (ENSSLDG00000024228) pole3 (ENSSLDG00000024205) rpl12 (ENSSLDG00000024199) kmt5b (ENSSLDG00000024174) ccnb2 (ENSSLDG00000024163) #22 cd82a (ENSSLDG00000024159) tspan18a (ENSSLDG00000024143) Pleuronectoidei ANCESTRAL SPECIES 52 ENSGT00940000157462.C.c.a ENSGT00940000154390.E.c ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000155333.A.a.g.b ENSGT00940000154914 ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d Tongue sole MODERN SPECIES 15 ENSCSEG00000008343 ENSCSEG00000008354 ENSCSEG00000008379 KRTCAP3 (ENSCSEG00000008447) ENSCSEG00000008465 esrrga (ENSCSEG00000008474) ENSCSEG00000008482 ENSCSEG00000008491 ENSCSEG00000008495 lpin1a (ENSCSEG00000008518) ENSCSEG00000008552 ENSCSEG00000008566 ENSCSEG00000008573 gfod2 (ENSCSEG00000008579) kmt5b (ENSCSEG00000008591) ccnb2 (ENSCSEG00000008610) #22 zgc:92818 (ENSCSEG00000008634) vps35 (ENSCSEG00000008642) mtfmt (ENSCSEG00000008666) celf1 (ENSCSEG00000008675) tollip (ENSCSEG00000008694) ENSCSEG00000008707 ENSCSEG00000008715 ENSCSEG00000008723 snrpa1 (ENSCSEG00000008758) selenos (ENSCSEG00000008771) chsy1 (ENSCSEG00000008810) ENSCSEG00000008836 aldh1a3 (ENSCSEG00000008999) asb7 (ENSCSEG00000009020) cd81a (ENSCSEG00000009033) Turbot DUPLICATION Turbot MODERN SPECIES 17 ENSSMAG00000032043 rassf7b (ENSSMAG00000005710) ENSSMAG00000005724 ENSSMAG00000005741 ENSSMAG00000005753 ENSSMAG00000005764 SHANK2 (ENSSMAG00000027423) ENSSMAG00000030149 PPFIA1 (ENSSMAG00000026619) ENSSMAG00000026740 ENSSMAG00000003524 ENSSMAG00000003550 ENSSMAG00000003662 ENSSMAG00000035843 ENSSMAG00000003803 ENSSMAG00000004225 #22 ENSSMAG00000003951 ENSSMAG00000033814 ENSSMAG00000030745 ENSSMAG00000003980 ENSSMAG00000031269 RAB11A (ENSSMAG00000033097) ENSSMAG00000030576 ENSSMAG00000035419 dis3l (ENSSMAG00000004147) tipin (ENSSMAG00000004166) lctla (ENSSMAG00000004176) crybgx (ENSSMAG00000004208) ENSSMAG00000003908 #22 ENSSMAG00000004238 ENSSMAG00000037704 Turbot MODERN SPECIES 17 ENSSMAG00000002365 ENSSMAG00000002391 ENSSMAG00000002397 ENSSMAG00000035986 ENSSMAG00000002421 ENSSMAG00000023491 ENSSMAG00000002480 zgc:194679 (ENSSMAG00000002484) ENSSMAG00000004356 ENSSMAG00000004346 ENSSMAG00000004326 ENSSMAG00000004313 ENSSMAG00000004282 ENSSMAG00000037704 ENSSMAG00000004238 ENSSMAG00000003908 #22 crybgx (ENSSMAG00000004208) lctla (ENSSMAG00000004176) tipin (ENSSMAG00000004166) dis3l (ENSSMAG00000004147) ENSSMAG00000035419 ENSSMAG00000030576 RAB11A (ENSSMAG00000033097) ENSSMAG00000031269 ENSSMAG00000003980 ENSSMAG00000030745 ENSSMAG00000033814 ENSSMAG00000003951 ENSSMAG00000004225 #22 ENSSMAG00000003803 ENSSMAG00000035843 Anabantaria ANCESTRAL SPECIES 11 ENSGT01030000234532.B.e.b.e ENSGT00940000155836.B ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Anabantoidei ANCESTRAL SPECIES 8 ENSGT01030000234532.B.e.b.e ENSGT00940000155836.B ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Climbing perch DUPLICATION Climbing perch MODERN SPECIES 16 HACD3 (ENSATEG00000021866) SLC24A1 (ENSATEG00000021887) DENND4A (ENSATEG00000021908) socs4 (ENSATEG00000021970) wdhd1 (ENSATEG00000021986) gch1 (ENSATEG00000022027) SAMD4A (ENSATEG00000022040) ero1a (ENSATEG00000022081) ENSATEG00000022101 ENSATEG00000022132 ENSATEG00000022204 ENSATEG00000022233 ENSATEG00000022248 ENSATEG00000022262 ENSATEG00000022291 ENSATEG00000022355 #22 crybgx (ENSATEG00000022426) lctla (ENSATEG00000022437) tipin (ENSATEG00000022453) dis3l (ENSATEG00000022464) ENSATEG00000022505 RAB11A (ENSATEG00000023730) ENSATEG00000022546 ENSATEG00000022559 ENSATEG00000022577 ENSATEG00000022648 ENSATEG00000022662 ENSATEG00000022675 #22 ENSATEG00000022688 ENSATEG00000026022 ENSATEG00000022706 Climbing perch MODERN SPECIES 16 ENSATEG00000022854 ENSATEG00000022843 ENSATEG00000022839 ENSATEG00000022820 ENSATEG00000022807 ENSATEG00000022803 ENSATEG00000022791 ENSATEG00000025456 ENSATEG00000022749 ENSATEG00000022743 ENSATEG00000022729 ENSATEG00000022724 ENSATEG00000022706 ENSATEG00000026022 ENSATEG00000022688 ENSATEG00000022675 #22 ENSATEG00000022662 ENSATEG00000022648 ENSATEG00000022577 ENSATEG00000022559 ENSATEG00000022546 RAB11A (ENSATEG00000023730) ENSATEG00000022505 dis3l (ENSATEG00000022464) tipin (ENSATEG00000022453) lctla (ENSATEG00000022437) crybgx (ENSATEG00000022426) ENSATEG00000022355 #22 ENSATEG00000022291 ENSATEG00000022262 ENSATEG00000022248 Siamese fighting fish MODERN SPECIES 14 abhd17c (ENSBSLG00000013888) arnt2 (ENSBSLG00000013944) slc39a1 (ENSBSLG00000015065) tmem208 (ENSBSLG00000015071) smad6a (ENSBSLG00000015189) SMAD3 (ENSBSLG00000015371) map2k5 (ENSBSLG00000015497) skor1a (ENSBSLG00000015827) PIAS1 (ENSBSLG00000015831) ENSBSLG00000015843 ENSBSLG00000015851 UACA (ENSBSLG00000015891) TLE3 (ENSBSLG00000015954) ENSBSLG00000016193 kif23 (ENSBSLG00000016203) ccnb2 (ENSBSLG00000003737) #22 crybgx (ENSBSLG00000003749) lctla (ENSBSLG00000003847) tipin (ENSBSLG00000003982) dis3l (ENSBSLG00000003997) ENSBSLG00000004040 ENSBSLG00000004060 ENSBSLG00000004066 ENSBSLG00000004076 ENSBSLG00000004079 HERC1 (ENSBSLG00000004100) ENSBSLG00000004779 ZNF710 (ENSBSLG00000004830) idh2 (ENSBSLG00000004876) si:ch211-107o10.3 (ENSBSLG00000005247) RASGRF1 (ENSBSLG00000005365) Zig-zag eel DUPLICATION Zig-zag eel MODERN SPECIES 17 ENSMAMG00000017932 ENSMAMG00000017913 ENSMAMG00000017911 ENSMAMG00000017859 ENSMAMG00000025305 ENSMAMG00000017844 ENSMAMG00000017839 ENSMAMG00000017831 ENSMAMG00000017751 ENSMAMG00000028301 ENSMAMG00000025929 ENSMAMG00000017664 ENSMAMG00000025257 ENSMAMG00000024511 ENSMAMG00000027922 ENSMAMG00000017556 #22 ENSMAMG00000024446 ENSMAMG00000017520 ENSMAMG00000026774 ENSMAMG00000017358 ENSMAMG00000025603 ENSMAMG00000017337 RAB11A (ENSMAMG00000027414) ENSMAMG00000017293 dis3l (ENSMAMG00000017229) tipin (ENSMAMG00000017203) lctla (ENSMAMG00000017174) crybgx (ENSMAMG00000017150) ENSMAMG00000017121 #22 ENSMAMG00000017073 ENSMAMG00000017043 Zig-zag eel MODERN SPECIES 17 HACD3 (ENSMAMG00000016477) SLC24A1 (ENSMAMG00000016511) DENND4A (ENSMAMG00000016577) socs4 (ENSMAMG00000016740) wdhd1 (ENSMAMG00000016742) gch1 (ENSMAMG00000016761) SAMD4A (ENSMAMG00000016799) ero1a (ENSMAMG00000016859) ENSMAMG00000016868 ENSMAMG00000016896 TNNI2 (ENSMAMG00000027039) ENSMAMG00000016992 ENSMAMG00000017001 ENSMAMG00000017043 ENSMAMG00000017073 ENSMAMG00000017121 #22 crybgx (ENSMAMG00000017150) lctla (ENSMAMG00000017174) tipin (ENSMAMG00000017203) dis3l (ENSMAMG00000017229) ENSMAMG00000017293 RAB11A (ENSMAMG00000027414) ENSMAMG00000017337 ENSMAMG00000025603 ENSMAMG00000017358 ENSMAMG00000026774 ENSMAMG00000017520 ENSMAMG00000024446 ENSMAMG00000017556 #22 ENSMAMG00000027922 ENSMAMG00000024511 Eupercaria ANCESTRAL SPECIES 14 ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00940000175971 ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.f.a ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Fugu DUPLICATION Fugu MODERN SPECIES 4 large2 (ENSTRUG00000004599) rassf7b (ENSTRUG00000005851) ENSTRUG00000031974 guca1g (ENSTRUG00000006030) ENSTRUG00000028465 ENSTRUG00000031361 SHANK2 (ENSTRUG00000006508) CTTN (ENSTRUG00000007235) ppfia1 (ENSTRUG00000007699) ENSTRUG00000025667 ENSTRUG00000026832 ENSTRUG00000008059 arfgap2 (ENSTRUG00000008070) pex16 (ENSTRUG00000008505) cars1 (ENSTRUG00000008686) ccnb2 (ENSTRUG00000021973) #22 crybgx (ENSTRUG00000009403) lctla (ENSTRUG00000009494) tipin (ENSTRUG00000024319) ENSTRUG00000009956 rab11a (ENSTRUG00000020792) ENSTRUG00000024673 dapk2a (ENSTRUG00000010609) HERC1 (ENSTRUG00000029848) ENSTRUG00000029860 tspan18a (ENSTRUG00000020577) ENSTRUG00000029380 cd82a (ENSTRUG00000011027) ube2g1a (ENSTRUG00000011134) ccnb2 (ENSTRUG00000011147) #22 kmt5b (ENSTRUG00000022914) Fugu MODERN SPECIES 4 psmd13 (ENSTRUG00000012282) ENSTRUG00000012196 ZNF319 (ENSTRUG00000012157) ENSTRUG00000020629 csnk2a2a (ENSTRUG00000012041) MATCAP1 (ENSTRUG00000011981) zgc:194679 (ENSTRUG00000024839) zgc:194679 (ENSTRUG00000028025) ENSTRUG00000021071 ENSTRUG00000011870 GABARAPL2 (ENSTRUG00000022747) ENSTRUG00000011767 rpl12 (ENSTRUG00000021921) pole3 (ENSTRUG00000032058) kmt5b (ENSTRUG00000022914) ccnb2 (ENSTRUG00000011147) #22 ube2g1a (ENSTRUG00000011134) cd82a (ENSTRUG00000011027) ENSTRUG00000029380 tspan18a (ENSTRUG00000020577) ENSTRUG00000029860 HERC1 (ENSTRUG00000029848) dapk2a (ENSTRUG00000010609) ENSTRUG00000024673 rab11a (ENSTRUG00000020792) ENSTRUG00000009956 tipin (ENSTRUG00000024319) lctla (ENSTRUG00000009494) crybgx (ENSTRUG00000009403) ccnb2 (ENSTRUG00000021973) #22 cars1 (ENSTRUG00000008686) Tetraodon MODERN SPECIES 20 BRSK2 (ENSTNIG00000003396) ENSTNIG00000003395 RASSF7 (ENSTNIG00000003302) guca1g (ENSTNIG00000003301) ENSTNIG00000003300 ENSTNIG00000003299 SHANK2 (ENSTNIG00000004751) CTTN (ENSTNIG00000004752) ppfia1 (ENSTNIG00000004753) ENSTNIG00000004754 ENSTNIG00000004755 ENSTNIG00000004756 arfgap2 (ENSTNIG00000004757) pex16 (ENSTNIG00000004758) cars1 (ENSTNIG00000004759) ccnb2 (ENSTNIG00000004760) #22 crybgx (ENSTNIG00000004761) lctla (ENSTNIG00000004762) tipin (ENSTNIG00000004763) dis3l (ENSTNIG00000004764) ENSTNIG00000004765 ENSTNIG00000003434 dapk2a (ENSTNIG00000003435) HERC1 (ENSTNIG00000003436) tspan18a (ENSTNIG00000003437) cd82a (ENSTNIG00000003438) ube2g1a (ENSTNIG00000015331) cd82a (ENSTNIG00000003439) ube2g1a (ENSTNIG00000000903) kmt5b (ENSTNIG00000003440) pole3 (ENSTNIG00000003441) Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000155333.A.a.g.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 696 arfgap2 (ENSLBEG00000019751) pex16 (ENSLBEG00000019715) cars1 (ENSLBEG00000019633) ccnb2 (ENSLBEG00000019592) #22 crybgx (ENSLBEG00000019567) lctla (ENSLBEG00000019525) tipin (ENSLBEG00000019500) dis3l (ENSLBEG00000019430) Ballan wrasse MODERN SPECIES 799 zgc:194679 (ENSLBEG00000028436) ENSLBEG00000028439 NQO2 (ENSLBEG00000028441) GABARAPL2 (ENSLBEG00000028443) ENSLBEG00000028444 rpl12 (ENSLBEG00000005393) pole3 (ENSLBEG00000005478) kmt5b (ENSLBEG00000005503) ccnb2 (ENSLBEG00000005585) #22 Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 ENSGT00940000155333.A.a.g.a ENSGT00940000155333.A.a.h ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00390000017790 ENSGT00940000155568 Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000155907.b.b ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 ENSGT00940000155333.A.a.g.a ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00390000017790 ENSGT00940000155568 ENSGT00940000163723.A.e Gilthead seabream DUPLICATION Gilthead seabream MODERN SPECIES 18 ENSSAUG00010018244 ZNF319 (ENSSAUG00010018245) csnk2a2a (ENSSAUG00010018259) MATCAP1 (ENSSAUG00010018624) zgc:194679 (ENSSAUG00010018642) zgc:194679 (ENSSAUG00010018643) ENSSAUG00010018644 NQO2 (ENSSAUG00010018647) GABARAPL2 (ENSSAUG00010018669) ENSSAUG00010018675 ENSSAUG00010018679 ENSSAUG00010018681 rpl12 (ENSSAUG00010018685) pole3 (ENSSAUG00010018691) kmt5b (ENSSAUG00010018693) ccnb2 (ENSSAUG00010018695) #22 cd82a (ENSSAUG00010018700) tspan18a (ENSSAUG00010018721) HERC1 (ENSSAUG00010018739) dapk2a (ENSSAUG00010018803) ENSSAUG00010019086 rab11a (ENSSAUG00010019089) ENSSAUG00010019106 ENSSAUG00010019213 dis3l (ENSSAUG00010019226) tipin (ENSSAUG00010019272) lctla (ENSSAUG00010019278) crybgx (ENSSAUG00010019299) ENSSAUG00010019302 ccnb2 (ENSSAUG00010019305) #22 cars1 (ENSSAUG00010019318) Gilthead seabream MODERN SPECIES 18 ENSSAUG00010022232 ENSSAUG00010022231 guca1g (ENSSAUG00010022229) ENSSAUG00010022228 ENSSAUG00010022227 SHANK2 (ENSSAUG00010022223) CTTN (ENSSAUG00010022156) PPFIA1 (ENSSAUG00010019804) ENSSAUG00010019730 ENSSAUG00010019719 ENSSAUG00010019716 ENSSAUG00010019710 arfgap2 (ENSSAUG00010019616) pex16 (ENSSAUG00010019614) cars1 (ENSSAUG00010019318) ccnb2 (ENSSAUG00010019305) #22 ENSSAUG00010019302 crybgx (ENSSAUG00010019299) lctla (ENSSAUG00010019278) tipin (ENSSAUG00010019272) dis3l (ENSSAUG00010019226) ENSSAUG00010019213 ENSSAUG00010019106 rab11a (ENSSAUG00010019089) ENSSAUG00010019086 dapk2a (ENSSAUG00010018803) HERC1 (ENSSAUG00010018739) tspan18a (ENSSAUG00010018721) cd82a (ENSSAUG00010018700) ccnb2 (ENSSAUG00010018695) #22 kmt5b (ENSSAUG00010018693) Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT01030000235215 ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000153424.a.a.c.a.b ENSGT00940000154914 ENSGT00940000155333.A.a.g.a ENSGT00530000063106.B ENSGT00390000005764 ENSGT00940000157369.b ENSGT00940000165890 ENSGT00390000006347.a ENSGT00390000017790 ENSGT00940000155568 ENSGT00940000163723.A.e ENSGT00940000163723.A.f.a.d ENSGT00940000163723.A.f.a.c European seabass DUPLICATION European seabass MODERN SPECIES 18 ENSDLAG00005034294 csnk2a2a (ENSDLAG00005022316) ENSDLAG00005022415 ENSDLAG00005027886 ENSDLAG00005034364 ENSDLAG00005034465 zgc:194679 (ENSDLAG00005033847) ENSDLAG00005022437 ENSDLAG00005022501 ENSDLAG00005030498 ENSDLAG00005033959 ENSDLAG00005022504 ENSDLAG00005022516 ENSDLAG00005027740 ENSDLAG00005022538 ENSDLAG00005022562 #22 ENSDLAG00005022573 ENSDLAG00005022575 ENSDLAG00005031844 ENSDLAG00005022632 ENSDLAG00005032472 ENSDLAG00005030332 RAB11A (ENSDLAG00005030246) ENSDLAG00005023499 dis3l (ENSDLAG00005008734) tipin (ENSDLAG00005008836) lctla (ENSDLAG00005008857) crybgx (ENSDLAG00005009036) ENSDLAG00005009046 #22 ENSDLAG00005009095 ENSDLAG00005010168 European seabass MODERN SPECIES 18 ENSDLAG00005029805 ENSDLAG00005016051 ENSDLAG00005034685 ENSDLAG00005028852 ENSDLAG00005034398 SHANK2 (ENSDLAG00005015925) ENSDLAG00005015464 PPFIA1 (ENSDLAG00005010588) ENSDLAG00005003584 ENSDLAG00005034599 ENSDLAG00005003125 ENSDLAG00005010448 ENSDLAG00005010356 ENSDLAG00005010168 ENSDLAG00005009095 ENSDLAG00005009046 #22 crybgx (ENSDLAG00005009036) lctla (ENSDLAG00005008857) tipin (ENSDLAG00005008836) dis3l (ENSDLAG00005008734) ENSDLAG00005023499 RAB11A (ENSDLAG00005030246) ENSDLAG00005030332 ENSDLAG00005032472 ENSDLAG00005022632 ENSDLAG00005031844 ENSDLAG00005022575 ENSDLAG00005022573 ENSDLAG00005022562 #22 ENSDLAG00005022538 ENSDLAG00005027740 Large yellow croaker MODERN SPECIES 480 ero1a (ENSLCRG00005002944) pacsin3 (ENSLCRG00005002960) glg1b (ENSLCRG00005002969) tnni2b.1 (ENSLCRG00005003007) aph1b (ENSLCRG00005003009) aph1b (ENSLCRG00005003014) OTOG (ENSLCRG00005003017) nqo1 (ENSLCRG00005003029) ENSLCRG00005003039 ENSLCRG00005003042 ENSLCRG00005003045 ENSLCRG00005003048 rpl12 (ENSLCRG00005003051) pole3 (ENSLCRG00005003071) kmt5b (ENSLCRG00005003072) ccnb2 (ENSLCRG00005003075) #22 cd82a (ENSLCRG00005003078) tspan18a (ENSLCRG00005003082) ENSLCRG00005003084 dapk2a (ENSLCRG00005003886) rab11a (ENSLCRG00005003890) tacr1b (ENSLCRG00005003894) SLC4A5 (ENSLCRG00005003912) ENSLCRG00005005760 SEZ6L (ENSLCRG00005005778) grk3 (ENSLCRG00005006651) cryba4 (ENSLCRG00005006673) crybb1 (ENSLCRG00005006674) acads (ENSLCRG00005006677) cldn5b (ENSLCRG00005006728) SEPTIN5 (ENSLCRG00005006734) Perciformes ANCESTRAL SPECIES 15 ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000166122 ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e ENSGT01030000235215 Cottioidei DUPLICATION Cottioidei ANCESTRAL SPECIES 13 ENSGT00940000160974.b.d ENSGT00940000159464 ENSGT00390000001802 ENSGT00940000158707.a.a ENSGT00940000160309.e.b ENSGT00390000004215.a.b.b.c.a.b.a.c ENSGT00390000004417.b ENSGT00940000163421.a.d.a ENSGT00940000166375 ENSGT00940000156563.a ENSGT00940000155010.a ENSGT00940000156938.e.e ENSGT00390000006922 ENSGT00940000164386 ENSGT00940000156431 ENSGT00940000155405.u #22 ENSGT00940000158481.d ENSGT00940000155524.f ENSGT00940000158086.b ENSGT00550000074827.gb ENSGT00940000155399.a ENSGT00940000159422.a.b ENSGT00940000155491.d ENSGT00940000166875.b ENSGT00390000017361 ENSGT00940000160434 ENSGT00950000183151.a.a.a ENSGT00390000013319 ENSGT00390000018587.e ENSGT00940000157760.g.a ENSGT00940000162248 Stickleback MODERN SPECIES 1 ENSGACG00000017523 rab8b (ENSGACG00000017522) idh3a (ENSGACG00000017520) CIB2 (ENSGACG00000017516) hsd11b2 (ENSGACG00000017514) ENSGACG00000017513 tppp3 (ENSGACG00000017512) ENSGACG00000017511 trpm1a (ENSGACG00000017508) ENSGACG00000017506 GABARAPL2 (ENSGACG00000017500) ENSGACG00000017498 rpl12 (ENSGACG00000017491) pole3 (ENSGACG00000017490) kmt5b (ENSGACG00000017488) ccnb2 (ENSGACG00000017487) #22 cd82a (ENSGACG00000017479) cpeb1b (ENSGACG00000017476) rbpms2b (ENSGACG00000017472) PSMA4 (ENSGACG00000017471) slc25a44b (ENSGACG00000017469) ENSGACG00000017468 ENSGACG00000017465 ENSGACG00000017464 MAP1A (ENSGACG00000017459) ENSGACG00000017456 ENSGACG00000017453 tubgcp4 (ENSGACG00000017448) cdkn2aip (ENSGACG00000017445) iqgap1 (ENSGACG00000017438) ENSGACG00000017436 Lumpfish MODERN SPECIES 18 psmd13 (ENSCLMG00005001116) ENSCLMG00005001110 ZNF319 (ENSCLMG00005001108) ENSCLMG00005001106 csnk2a2a (ENSCLMG00005000988) MATCAP1 (ENSCLMG00005000977) zgc:194679 (ENSCLMG00005000975) ENSCLMG00005000972 NQO2 (ENSCLMG00005000970) GABARAPL2 (ENSCLMG00005000967) ENSCLMG00005000965 ENSCLMG00005000964 rpl12 (ENSCLMG00005000956) pole3 (ENSCLMG00005000948) kmt5b (ENSCLMG00005000945) ccnb2 (ENSCLMG00005000940) #22 cd82a (ENSCLMG00005000937) cpeb1b (ENSCLMG00005000928) rbpms2a (ENSCLMG00005000906) PSMA4 (ENSCLMG00005000897) slc25a44b (ENSCLMG00005000896) CRABP1 (ENSCLMG00005000895) ENSCLMG00005000885 taldo1 (ENSCLMG00005000880) tspan4a (ENSCLMG00005000879) ddb1 (ENSCLMG00005000875) ENSCLMG00005000873 ENSCLMG00005000872 TMEM138 (ENSCLMG00005000871) cd151l (ENSCLMG00005000870) KCNA4 (ENSCLMG00005000869) Cottioidei ANCESTRAL SPECIES 72 ENSGT00940000161238.l ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000166122 ENSGT00940000163723.A.e ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405.v #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b Stickleback MODERN SPECIES 1 ENSGACG00000017236 ENSGACG00000017240 ENSGACG00000017242 ENSGACG00000017243 ENSGACG00000017245 ctsd (ENSGACG00000017247) ENSGACG00000017254 ENSGACG00000017256 ENSGACG00000017259 ENSGACG00000017261 ENSGACG00000017264 ENSGACG00000017266 arfgap2 (ENSGACG00000017267) pex16 (ENSGACG00000017273) cars1 (ENSGACG00000017279) ccnb2 (ENSGACG00000017292) #22 crybgx (ENSGACG00000017294) ENSGACG00000017296 ENSGACG00000017297 ENSGACG00000017302 dapk2a (ENSGACG00000017307) ENSGACG00000017310 ENSGACG00000017313 dis3l (ENSGACG00000017315) socs4 (ENSGACG00000017319) wdhd1 (ENSGACG00000017321) gch1 (ENSGACG00000017325) ENSGACG00000017331 pacsin3 (ENSGACG00000017333) GLG1 (ENSGACG00000017337) tnni2b.1 (ENSGACG00000017338) Lumpfish MODERN SPECIES 18 ENSCLMG00005003412 ENSCLMG00005003428 TSPAN18 (ENSCLMG00005003451) ENSCLMG00005003975 ENSCLMG00005003976 RASSF7 (ENSCLMG00005003977) ENSCLMG00005003978 ENSCLMG00005003980 ENSCLMG00005003986 CTTN (ENSCLMG00005004094) PPFIA1 (ENSCLMG00005004167) ENSCLMG00005009443 arfgap2 (ENSCLMG00005009444) pex16 (ENSCLMG00005009449) cars1 (ENSCLMG00005009487) ENSCLMG00005012023 #22 crybgx (ENSCLMG00005012024) lctla (ENSCLMG00005012029) ENSCLMG00005012144 tipin (ENSCLMG00005012145) dis3l (ENSCLMG00005012152) ENSCLMG00005012638 ENSCLMG00005012640 ENSCLMG00005012658 ENSCLMG00005012659 rab11a (ENSCLMG00005012660) ENSCLMG00005012674 ENSCLMG00005012717 ENSCLMG00005012720 #31 large2 (ENSCLMG00005012736) ENSCLMG00005014425 Perciformes_a ANCESTRAL SPECIES 55 ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.a.d ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000156431 ENSGT00940000155405 #22 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d Channel bull blenny DUPLICATION Channel bull blenny DUPLICATION Channel bull blenny MODERN SPECIES 17 sirt3 (ENSCGOG00000010852) psmd13 (ENSCGOG00000010247) ENSCGOG00000010237 ZNF319 (ENSCGOG00000010236) csnk2a2a (ENSCGOG00000007895) MATCAP1 (ENSCGOG00000007863) zgc:194679 (ENSCGOG00000007862) ENSCGOG00000007860 ENSCGOG00000007776 GABARAPL2 (ENSCGOG00000007767) ENSCGOG00000007766 ENSCGOG00000007763 rpl12 (ENSCGOG00000007669) pole3 (ENSCGOG00000007661) kmt5b (ENSCGOG00000007635) ccnb2 (ENSCGOG00000007619) #22 kmt5b (ENSCGOG00000007614) ccnb2 (ENSCGOG00000007613) #22 cd82a (ENSCGOG00000007609) tspan18a (ENSCGOG00000007545) ENSCGOG00000007543 HERC1 (ENSCGOG00000006815) dapk2a (ENSCGOG00000006770) ENSCGOG00000006769 rab11a (ENSCGOG00000006701) ENSCGOG00000005992 dis3l (ENSCGOG00000005362) tipin (ENSCGOG00000005347) lctla (ENSCGOG00000005318) crybgx (ENSCGOG00000005309) ccnb2 (ENSCGOG00000005301) #22 Channel bull blenny MODERN SPECIES 17 ENSCGOG00000000959 SLCO3A1 (ENSCGOG00000000962) ENSCGOG00000001000 ENSCGOG00000001003 ENSCGOG00000001011 ENSCGOG00000001014 GLO1 (ENSCGOG00000001016) eprs1 (ENSCGOG00000001039) TDP1 (ENSCGOG00000001479) hmbox1a (ENSCGOG00000001525) KIF13B (ENSCGOG00000001573) ENSCGOG00000003070 arfgap2 (ENSCGOG00000003096) pex16 (ENSCGOG00000003590) cars1 (ENSCGOG00000003638) ccnb2 (ENSCGOG00000005301) #22 crybgx (ENSCGOG00000005309) lctla (ENSCGOG00000005318) tipin (ENSCGOG00000005347) dis3l (ENSCGOG00000005362) ENSCGOG00000005992 rab11a (ENSCGOG00000006701) ENSCGOG00000006769 dapk2a (ENSCGOG00000006770) HERC1 (ENSCGOG00000006815) ENSCGOG00000007543 tspan18a (ENSCGOG00000007545) cd82a (ENSCGOG00000007609) ccnb2 (ENSCGOG00000007613) #22 kmt5b (ENSCGOG00000007614) ccnb2 (ENSCGOG00000007619) #22 Channel bull blenny MODERN SPECIES 17 ENSCGOG00000010237 ZNF319 (ENSCGOG00000010236) csnk2a2a (ENSCGOG00000007895) MATCAP1 (ENSCGOG00000007863) zgc:194679 (ENSCGOG00000007862) ENSCGOG00000007860 ENSCGOG00000007776 GABARAPL2 (ENSCGOG00000007767) ENSCGOG00000007766 ENSCGOG00000007763 rpl12 (ENSCGOG00000007669) pole3 (ENSCGOG00000007661) kmt5b (ENSCGOG00000007635) ccnb2 (ENSCGOG00000007619) #22 kmt5b (ENSCGOG00000007614) ccnb2 (ENSCGOG00000007613) #22 cd82a (ENSCGOG00000007609) tspan18a (ENSCGOG00000007545) ENSCGOG00000007543 HERC1 (ENSCGOG00000006815) dapk2a (ENSCGOG00000006770) ENSCGOG00000006769 rab11a (ENSCGOG00000006701) ENSCGOG00000005992 dis3l (ENSCGOG00000005362) tipin (ENSCGOG00000005347) lctla (ENSCGOG00000005318) crybgx (ENSCGOG00000005309) ccnb2 (ENSCGOG00000005301) #22 cars1 (ENSCGOG00000003638) pex16 (ENSCGOG00000003590) Pike perch DUPLICATION Pike perch MODERN SPECIES 42 URGCP (ENSSLUG00000020857) ENSSLUG00000020853 ENSSLUG00000020850 ENSSLUG00000020848 guca1g (ENSSLUG00000020844) ENSSLUG00000020807 ENSSLUG00000020780 ENSSLUG00000020774 SHANK2 (ENSSLUG00000020771) CTTN (ENSSLUG00000020629) ppfia1 (ENSSLUG00000014829) ENSSLUG00000014557 arfgap2 (ENSSLUG00000014518) pex16 (ENSSLUG00000014500) cars1 (ENSSLUG00000009586) ccnb2 (ENSSLUG00000009411) #22 crybgx (ENSSLUG00000009402) lctla (ENSSLUG00000009393) tipin (ENSSLUG00000009385) dis3l (ENSSLUG00000009340) ENSSLUG00000009292 rab11a (ENSSLUG00000009263) ENSSLUG00000009257 dapk2a (ENSSLUG00000009254) ENSSLUG00000009230 TSPAN18 (ENSSLUG00000009223) cd82a (ENSSLUG00000009215) ccnb2 (ENSSLUG00000009207) #22 kmt5b (ENSSLUG00000009202) kmt5b (ENSSLUG00000009197) pole3 (ENSSLUG00000009195) Pike perch MODERN SPECIES 42 psmd13 (ENSSLUG00000008927) ENSSLUG00000008954 ZNF319 (ENSSLUG00000008957) csnk2a2a (ENSSLUG00000008968) MATCAP1 (ENSSLUG00000008988) zgc:194679 (ENSSLUG00000008992) ENSSLUG00000008994 nqo1 (ENSSLUG00000008999) GABARAPL2 (ENSSLUG00000009005) ENSSLUG00000009015 ENSSLUG00000009020 rpl12 (ENSSLUG00000009043) pole3 (ENSSLUG00000009195) kmt5b (ENSSLUG00000009197) kmt5b (ENSSLUG00000009202) ccnb2 (ENSSLUG00000009207) #22 cd82a (ENSSLUG00000009215) TSPAN18 (ENSSLUG00000009223) ENSSLUG00000009230 dapk2a (ENSSLUG00000009254) ENSSLUG00000009257 rab11a (ENSSLUG00000009263) ENSSLUG00000009292 dis3l (ENSSLUG00000009340) tipin (ENSSLUG00000009385) lctla (ENSSLUG00000009393) crybgx (ENSSLUG00000009402) ccnb2 (ENSSLUG00000009411) #22 cars1 (ENSSLUG00000009586) pex16 (ENSSLUG00000014500) arfgap2 (ENSSLUG00000014518) Tiger tail seahorse MODERN SPECIES 136 psmd13 (ENSHCOG00000006339) ENSHCOG00000006302 ZNF319 (ENSHCOG00000006286) csnk2a2a (ENSHCOG00000006280) MATCAP1 (ENSHCOG00000006239) zgc:194679 (ENSHCOG00000006231) ENSHCOG00000006226 ENSHCOG00000006213 GABARAPL2 (ENSHCOG00000006062) ENSHCOG00000006007 ENSHCOG00000005994 rpl12 (ENSHCOG00000005990) pole3 (ENSHCOG00000005972) kmt5b (ENSHCOG00000005960) nxpe3 (ENSHCOG00000005947) ccnb2 (ENSHCOG00000005943) #22 cd82a (ENSHCOG00000005923) tspan18a (ENSHCOG00000005835) HERC1 (ENSHCOG00000005794) dapk2a (ENSHCOG00000005672) ENSHCOG00000005661 rab11a (ENSHCOG00000005652) ENSHCOG00000005631 ENSHCOG00000005626 dis3l (ENSHCOG00000000183) tipin (ENSHCOG00000005560) lctla (ENSHCOG00000005554) crybgx (ENSHCOG00000005524) cars1 (ENSHCOG00000005493) pex16 (ENSHCOG00000005418) arfgap2 (ENSHCOG00000005405) Pinecone sodierfish MODERN SPECIES 17 ENSMMDG00005002136 ENSMMDG00005002134 ENSMMDG00005002131 ENSMMDG00005002127 ENSMMDG00005002126 ENSMMDG00005002122 ENSMMDG00005002116 nadsyn1 (ENSMMDG00005002098) ENSMMDG00005002083 DOK4 (ENSMMDG00005002052) ENSMMDG00005002045 ccdc102a (ENSMMDG00005002043) arfgap2 (ENSMMDG00005002034) pex16 (ENSMMDG00005002018) cars1 (ENSMMDG00005000850) ccnb2 (ENSMMDG00005000795) #22 crybgx (ENSMMDG00005000793) lctla (ENSMMDG00005000784) BNC1 (ENSMMDG00005000777) HDGFL3 (ENSMMDG00005000775) rbb4l (ENSMMDG00005000718) txlng (ENSMMDG00005000463) ENSMMDG00005000425 ENSMMDG00005000416 ENSMMDG00005000198 orc1 (ENSMMDG00005024438) ENSMMDG00005024437 ENSMMDG00005024436 ENSMMDG00005024435 ENSMMDG00005024393 ENSMMDG00005024388 Cod DUPLICATION Cod MODERN SPECIES 5 ENSGMOG00000016135 ENSGMOG00000012783 ENSGMOG00000010935 ENSGMOG00000010892 ENSGMOG00000029806 ENSGMOG00000022909 ENSGMOG00000028784 ENSGMOG00000010812 ENSGMOG00000018344 ENSGMOG00000033701 ENSGMOG00000005408 ENSGMOG00000014850 ENSGMOG00000014867 ENSGMOG00000014900 ENSGMOG00000014942 ENSGMOG00000014993 #22 crybgx (ENSGMOG00000015010) ENSGMOG00000015022 dis3l (ENSGMOG00000003012) ENSGMOG00000011768 ENSGMOG00000004096 ENSGMOG00000004071 ENSGMOG00000004049 ENSGMOG00000035369 ENSGMOG00000035938 ENSGMOG00000001565 cdh15 (ENSGMOG00000001534) ACSF3 (ENSGMOG00000001508) CBFA2T3 (ENSGMOG00000001484) PABPN1L (ENSGMOG00000001475) trappc2l (ENSGMOG00000001406) Cod MODERN SPECIES 8 ENSGMOG00000034838 ENSGMOG00000030791 ENSGMOG00000013464 tnfsf10l (ENSGMOG00000035908) ccnb3 (ENSGMOG00000028821) ENSGMOG00000034325 htr2cl1 (ENSGMOG00000032489) zgc:109889 (ENSGMOG00000027049) ENSGMOG00000028135 ENSGMOG00000030446 zgc:92429 (ENSGMOG00000015367) ENSGMOG00000027328 zgc:162171 (ENSGMOG00000015340) ENSGMOG00000008450 vbp1 (ENSGMOG00000008449) ENSGMOG00000008448 #22 ENSGMOG00000034541 ENSGMOG00000008447 ENSGMOG00000033065 ENSGMOG00000024226 ENSGMOG00000036768 ENSGMOG00000029798 ENSGMOG00000017572 ENSGMOG00000032743 ENSGMOG00000004421 ENSGMOG00000024744 emc4 (ENSGMOG00000004554) ENSGMOG00000025081 lpcat4 (ENSGMOG00000004565) ENSGMOG00000033571 nop10 (ENSGMOG00000027298) Protacanthopterygii ANCESTRAL SPECIES 2 ENSGT01050000244970.b.j.a ENSGT00390000018333 #7 ENSGT00730000111210 #8 ENSGT00940000163854.b ENSGT00940000155047.ac.a #10 ENSGT00940000154489.A.c #11 ENSGT00950000183065.A #12 ENSGT00950000183065.D #13 ENSGT00940000158898 #15 ENSGT00940000164919.b ENSGT00940000164516.a ENSGT00940000157602 #17 ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 ENSGT00940000156900 ENSGT00390000005939.b ENSGT00940000159421 ENSGT00950000182838.B.a.a ENSGT00970000193520 ENSGT00940000159841 ENSGT00950000183102.A.b.b ENSGT00550000074994 ENSGT00940000157410 ENSGT00940000165027 ENSGT00940000156149.B ENSGT00390000012700 ENSGT00940000156898 ENSGT00940000155584 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 421 ENSGT00390000018333.b #7 ENSGT00940000175584 ENSGT00940000163854.b.f ENSGT00940000155047.ac.a.a.b #10 ENSGT00940000154489.A.c.d #11 ENSGT00950000183065.A.k #12 ENSGT00950000183065.D.a #13 ENSGT00940000158898.e #15 ENSGT00940000158898.f.a.b #15 ENSGT00940000164919.b.c.a ENSGT00940000157602.c #17 ENSGT00940000164516.a.g ENSGT00390000016607.a.o.b #19 ENSGT00940000156573.g #20 ENSGT00940000157691.g #21 ENSGT00940000155405.bb #22 ENSGT00940000157461.c.a #24 ENSGT00940000156900.m ENSGT00390000005939.b ENSGT00940000159421.j.b ENSGT00950000182838.B.a.a.g Salmoninae_a ANCESTRAL SPECIES 73 ENSGT00390000018333.b #7 ENSGT00730000111210.g #8 ENSGT00940000163854.b.f ENSGT00940000155047.ac.a.a.b #10 ENSGT00940000154489.A.c.d #11 ENSGT00950000183065.A.k #12 ENSGT00950000183065.D.a #13 ENSGT00940000158898.e #15 ENSGT00940000158898.f.a.b #15 ENSGT00940000164919.b.c.a ENSGT00940000157602.c #17 ENSGT00940000164516.a.g ENSGT00390000016607.a.o.b #19 ENSGT00940000156573.g #20 ENSGT00940000157691.g #21 ENSGT00940000155405.bb #22 ENSGT00940000157461.c.a #24 ENSGT00940000156900.m ENSGT00390000005939.b.l ENSGT00940000159421.j.b ENSGT00950000182838.B.a.a.g ENSGT00940000159841.e ENSGT01060000252214 ENSGT00550000074994.f ENSGT00940000157410.d.b ENSGT00940000165027.g.b ENSGT00940000156149.B.h.a ENSGT00940000156898.i ENSGT00940000155584.z.a ENSGT00940000164556.l ENSGT00940000160442.g.a Salmo ANCESTRAL SPECIES 30 ENSGT00940000175584 ENSGT00730000111210.g #8 ENSGT00940000163854.b.f ENSGT00940000155047.ac.a.a.b #10 ENSGT00940000154489.A.c.d #11 ENSGT00950000183065.A.k #12 ENSGT00950000183065.D.a #13 ENSGT00940000158898.f.a.b #15 ENSGT00940000164919.b.c.a ENSGT00940000157602.c #17 ENSGT00940000164516.a.h.a ENSGT01030000234641.b.a.b.a.a.h.b.b ENSGT00390000016607.a.o.b #19 ENSGT00940000156573.g #20 ENSGT00940000157691.g #21 ENSGT00940000155405.bb #22 ENSGT00940000157461.c.a #24 ENSGT00940000156900.m ENSGT00390000005939.b.l ENSGT00940000159421.j.b ENSGT00950000182838.B.a.a.g ENSGT00940000159841.e ENSGT01060000252214 ENSGT00550000074994.f ENSGT00940000157410.d.b ENSGT00940000165027.g.b ENSGT00940000156149.B.h.a ENSGT00940000156898.i ENSGT00940000155584.z.a ENSGT00940000164556.l ENSGT00940000160442.g.a Atlantic salmon MODERN SPECIES 18 RFX7 (ENSSSAG00000092049) MNS1 (ENSSSAG00000081198) #8 ENSSSAG00000100955 ENSSSAG00000110564 ENSSSAG00000080956 #10 CGNL1 (ENSSSAG00000080952) #11 MYZAP (ENSSSAG00000080949) #12 aldh1a2 (ENSSSAG00000080896) #15 aqp9b (ENSSSAG00000080852) lipca (ENSSSAG00000080816) #17 ENSSSAG00000080797 adam10a (ENSSSAG00000090727) MINDY2 (ENSSSAG00000073871) #19 sltm (ENSSSAG00000080371) #20 rnf111 (ENSSSAG00000080348) #21 ccnb2 (ENSSSAG00000080343) #22 MYO1E (ENSSSAG00000072531) #24 mtmr10 (ENSSSAG00000079079) ENSSSAG00000085762 ENSSSAG00000081179 ap1g1 (ENSSSAG00000081077) ENSSSAG00000081015 ENSSSAG00000108510 ENSSSAG00000080975 crld2 (ENSSSAG00000080970) ENSSSAG00000118554 ENSSSAG00000116226 zfhx3b (ENSSSAG00000085345) dhx38 (ENSSSAG00000076393) ENSSSAG00000107970 zgc:162592 (ENSSSAG00000076340) River trout MODERN SPECIES 21 ENSSTUG00000038641 mns1 (ENSSTUG00000038649) #8 ENSSTUG00000038668 TCF12 (ENSSTUG00000038698) #10 CGNL1 (ENSSTUG00000038821) #11 MYZAP (ENSSTUG00000038920) #12 polr2m (ENSSTUG00000038935) #13 aldh1a2 (ENSSTUG00000039031) #15 aqp9b (ENSSTUG00000044458) lipca (ENSSTUG00000044466) #17 adam10a (ENSSTUG00000044578) ENSSTUG00000046648 MINDY2 (ENSSTUG00000046651) #19 sltm (ENSSTUG00000046659) #20 rnf111 (ENSSTUG00000046670) #21 ccnb2 (ENSSTUG00000046707) #22 MYO1E (ENSSTUG00000046820) #24 mtmr10 (ENSSTUG00000048851) ATXN1L (ENSSTUG00000049223) ZNF821 (ENSSTUG00000049227) ap1g1 (ENSSTUG00000049248) PHLPP2 (ENSSTUG00000049376) ENSSTUG00000049411 USP10 (ENSSTUG00000049427) CRISPLD2 (ENSSTUG00000049553) ENSSTUG00000049600 ENSSTUG00000049603 zfhx3b (ENSSTUG00000049607) dhx38 (ENSSTUG00000049641) cyb5b (ENSSTUG00000049860) zgc:162592 (ENSSTUG00000049861) Oncorhynchus ANCESTRAL SPECIES ENSGT01050000244970.b.j.a.c ENSGT00390000018333.b #7 ENSGT00730000111210.g #8 ENSGT00940000163854.b.f ENSGT00940000155047.ac.a.a.b #10 ENSGT00940000154489.A.c.d #11 ENSGT00950000183065.A.k #12 ENSGT00950000183065.D.a #13 ENSGT00940000158898.e #15 ENSGT00940000164919.b.d.a ENSGT00940000157602.c #17 ENSGT00940000164516.a.g ENSGT00390000016607.a.o.b #19 ENSGT00940000156573.g #20 ENSGT00940000157691.g #21 ENSGT00940000155405.bb #22 ENSGT00940000157461.c.a #24 ENSGT00940000156900.m ENSGT00390000005939.b.l ENSGT00940000159421.j.b ENSGT00950000182838.B.a.a.g ENSGT00940000159841.e ENSGT01060000252214 ENSGT00550000074994.f ENSGT00940000157410.d.b ENSGT00940000165027.h.a ENSGT00940000156149.B.h.a ENSGT00940000156898.j.b ENSGT00940000155584.`b ENSGT00940000160442.h ENSGT00390000007818.fc Oncorhynchus_a ANCESTRAL SPECIES ENSGT01050000244970.b.j.a.c ENSGT00390000018333.b #7 ENSGT00730000111210.g #8 ENSGT00940000163854.b.f ENSGT00940000155047.ac.a.a.b #10 ENSGT00940000154489.A.c.d #11 ENSGT00950000183065.A.k #12 ENSGT00950000183065.D.a #13 ENSGT00940000158898.e #15 ENSGT00940000164919.b.d.a ENSGT00940000157602.c #17 ENSGT00940000164516.a.g ENSGT00390000016607.a.o.b #19 ENSGT00940000156573.g #20 ENSGT00940000157691.g #21 ENSGT00940000155405.bb #22 ENSGT00940000157461.c.a #24 ENSGT00940000156900.m ENSGT00390000005939.b.l ENSGT00940000159421.j.b ENSGT00950000182838.B.a.a.g ENSGT00940000159841.e ENSGT01060000252214 ENSGT00550000074994.f ENSGT00940000157410.d.b ENSGT00940000165027.h.a ENSGT00940000156149.B.h.a ENSGT00940000156898.j.b ENSGT00940000155584.`b ENSGT00940000160442.g.a ENSGT00390000007818.fc Coho salmon MODERN SPECIES 22 ENSOKIG00005050717 mns1 (ENSOKIG00005050712) #8 ENSOKIG00005050708 TCF12 (ENSOKIG00005050695) #10 CGNL1 (ENSOKIG00005050688) #11 MYZAP (ENSOKIG00005050682) #12 polr2m (ENSOKIG00005050678) #13 aldh1a2 (ENSOKIG00005050499) #15 aqp9b (ENSOKIG00005050431) lipca (ENSOKIG00005050427) #17 adam10a (ENSOKIG00005050317) MINDY2 (ENSOKIG00005050280) #19 sltm (ENSOKIG00005050256) #20 ENSOKIG00005050250 rnf111 (ENSOKIG00005050243) #21 ccnb2 (ENSOKIG00005050238) #22 MYO1E (ENSOKIG00005049948) #24 mtmr10 (ENSOKIG00005049846) ATXN1L (ENSOKIG00005049840) ZNF821 (ENSOKIG00005049833) ap1g1 (ENSOKIG00005049761) PHLPP2 (ENSOKIG00005049636) ENSOKIG00005049608 ENSOKIG00005049099 CRISPLD2 (ENSOKIG00005049007) ENSOKIG00005048995 ENSOKIG00005048993 ENSOKIG00005048991 zfhx3b (ENSOKIG00005048985) dhx38 (ENSOKIG00005048694) ENSOKIG00005048633 Chinook salmon MODERN SPECIES 28 RFX7 (ENSOTSG00005012072) tex9 (ENSOTSG00005012067) #7 mns1 (ENSOTSG00005011913) #8 ENSOTSG00005011909 TCF12 (ENSOTSG00005011905) #10 CGNL1 (ENSOTSG00005011902) #11 MYZAP (ENSOTSG00005011898) #12 polr2m (ENSOTSG00005011895) #13 aldh1a2 (ENSOTSG00005007244) #15 aqp9b (ENSOTSG00005007214) lipca (ENSOTSG00005007154) #17 adam10a (ENSOTSG00005007129) MINDY2 (ENSOTSG00005007127) #19 sltm (ENSOTSG00005007124) #20 rnf111 (ENSOTSG00005007097) #21 ccnb2 (ENSOTSG00005007096) #22 MYO1E (ENSOTSG00005000449) #24 mtmr10 (ENSOTSG00005000411) ATXN1L (ENSOTSG00005000399) ZNF821 (ENSOTSG00005000397) ap1g1 (ENSOTSG00005000385) PHLPP2 (ENSOTSG00005000345) USP10 (ENSOTSG00005032644) CRISPLD2 (ENSOTSG00005032621) ENSOTSG00005032619 dhx38 (ENSOTSG00005029898) ENSOTSG00005029892 CPNE7 (ENSOTSG00005029612) rpl13 (ENSOTSG00005029606) gcshb (ENSOTSG00005029605) kars1 (ENSOTSG00005029476) Rainbow trout MODERN SPECIES 27 TCF12 (ENSOMYG00000019525) #10 CGNL1 (ENSOMYG00000019496) #11 MYZAP (ENSOMYG00000019482) #12 polr2m (ENSOMYG00000019474) #13 aldh1a2 (ENSOMYG00000011624) #15 aqp9b (ENSOMYG00000011272) lipca (ENSOMYG00000010986) #17 ENSOMYG00000071926 adam10a (ENSOMYG00000010593) ENSOMYG00000060295 MINDY2 (ENSOMYG00000010416) #19 sltm (ENSOMYG00000010350) #20 ENSOMYG00000010339 ENSOMYG00000070282 rnf111 (ENSOMYG00000010301) #21 ccnb2 (ENSOMYG00000010271) #22 MYO1E (ENSOMYG00000006417) #24 mtmr10 (ENSOMYG00000003067) ENSOMYG00000002869 ENSOMYG00000002861 ap1g1 (ENSOMYG00000002772) ENSOMYG00000002330 ENSOMYG00000048310 ENSOMYG00000001594 ENSOMYG00000001707 ENSOMYG00000001287 ENSOMYG00000067960 ENSOMYG00000059983 zfhx3b (ENSOMYG00000001205) dhx38 (ENSOMYG00000046456) cyb5b (ENSOMYG00000046389) Huchen MODERN SPECIES 149 tex9 (ENSHHUG00000038953) #7 mns1 (ENSHHUG00000038986) #8 ENSHHUG00000038993 TCF12 (ENSHHUG00000039004) #10 CGNL1 (ENSHHUG00000039040) #11 MYZAP (ENSHHUG00000039058) #12 polr2m (ENSHHUG00000039087) #13 aldh1a2 (ENSHHUG00000039119) #15 aqp9b (ENSHHUG00000040749) lipca (ENSHHUG00000040751) #17 adam10a (ENSHHUG00000040774) MINDY2 (ENSHHUG00000040831) #19 ENSHHUG00000040837 sltm (ENSHHUG00000040842) #20 rnf111 (ENSHHUG00000040848) #21 ccnb2 (ENSHHUG00000040871) #22 MYO1E (ENSHHUG00000040892) #24 mtmr10 (ENSHHUG00000041229) ATXN1L (ENSHHUG00000041262) ZNF821 (ENSHHUG00000041268) ap1g1 (ENSHHUG00000041273) phlpp2 (ENSHHUG00000041384) ENSHHUG00000041390 PHLPP2 (ENSHHUG00000041392) ENSHHUG00000041406 CRISPLD2 (ENSHHUG00000041518) ENSHHUG00000041540 ENSHHUG00000041547 Salmoninae ANCESTRAL SPECIES 67 ENSGT01050000244970.b.j.a.d ENSGT00390000018333.a #7 ENSGT00730000111210 #8 ENSGT00940000163854.b.e ENSGT00940000155047.ac.a.a.a #10 ENSGT00940000154489.A.c.c #11 ENSGT00950000183065.A.l #12 ENSGT00950000183065.D.b #13 ENSGT00940000158898.f.a.a.a #15 ENSGT00940000164919.b.c.b ENSGT00940000157602.d #17 ENSGT00940000164516.a.h ENSGT00390000016607.a.o.a #19 ENSGT00940000156573.h #20 ENSGT00940000157691.h #21 ENSGT00940000155405.cb #22 ENSGT00940000157461.c.b #24 ENSGT00940000156900.n.b.a.b ENSGT00940000159421.j.a ENSGT00950000182838.B.a.a.h ENSGT00970000193520 ENSGT00940000159841 ENSGT00950000183102.A.b.b ENSGT00550000074994.e ENSGT00940000157410.c ENSGT00940000165027.g.a ENSGT00550000074994.f ENSGT00940000157410.d ENSGT00940000165027.h ENSGT00940000156149.B.h.b ENSGT00390000012700 Salmoninae_a ANCESTRAL SPECIES 72 ENSGT00730000111210.h #8 ENSGT00940000163854.b.e ENSGT00940000155047.ac.a.a.a #10 ENSGT00940000154489.A.c.c #11 ENSGT00950000183065.A.l #12 ENSGT00950000183065.D.b #13 ENSGT00940000158898.f.a.a.a #15 ENSGT00940000164919.b.c.b ENSGT00940000158898.f.b #15 ENSGT00940000164919.b.d ENSGT00940000157602.d #17 ENSGT00940000164516.a.h.a ENSGT00390000016607.a.o.a #19 ENSGT00940000156573.h #20 ENSGT00940000157691.h #21 ENSGT00940000155405.cb #22 ENSGT00940000157461.c.b #24 ENSGT00940000156900.n.b.a.a ENSGT00390000005939.b.k ENSGT00940000159421.i ENSGT00950000182838.B.a.a.h ENSGT00940000159841.f ENSGT00950000183102.A.b.b ENSGT00550000074994.e ENSGT00940000157410.d.a ENSGT00940000165027.g.a ENSGT00940000165027.h ENSGT00940000156149.B.h.b ENSGT00390000012700 ENSGT00940000156898.j.a ENSGT00940000155584.z.b Oncorhynchus ANCESTRAL SPECIES 32 ENSGT01050000244970.b.j.a.d ENSGT00390000018333.a #7 ENSGT00730000111210.h #8 ENSGT00940000163854.b.e ENSGT00940000155047.ac.a.a.a #10 ENSGT00940000154489.A.c.c #11 ENSGT00950000183065.A.l #12 ENSGT00950000183065.D.b #13 ENSGT00940000158898.f.b #15 ENSGT00940000164919.b.d.b ENSGT00940000157602.d #17 ENSGT00940000164516.a.h.a ENSGT00390000016607.a.o.a #19 ENSGT00940000156573.h #20 ENSGT00940000157691.h #21 ENSGT00940000155405.cb #22 ENSGT00940000157461.c.b #24 ENSGT00940000156900.n.b.a.a ENSGT00390000005939.b.k ENSGT00940000159421.i ENSGT00950000182838.B.a.a.h ENSGT00940000159841.f ENSGT00950000183102.A.b.b ENSGT00550000074994.e ENSGT00940000157410.d.a ENSGT00940000165027.h.b ENSGT00940000156149.B.h.b ENSGT00390000012700 ENSGT00940000156898.j.a ENSGT00940000155584.z.b ENSGT00940000164556.k Rainbow trout MODERN SPECIES 18 RFX7 (ENSOMYG00000046895) TEX9 (ENSOMYG00000046885) #7 MNS1 (ENSOMYG00000048241) #8 ENSOMYG00000068994 TCF12 (ENSOMYG00000046858) #10 CGNL1 (ENSOMYG00000046818) #11 MYZAP (ENSOMYG00000046800) #12 polr2m (ENSOMYG00000046796) #13 aldh1a2 (ENSOMYG00000046040) #15 aqp9b (ENSOMYG00000045865) lipca (ENSOMYG00000071826) #17 ada10 (ENSOMYG00000045086) MINDY2 (ENSOMYG00000045005) #19 sltm (ENSOMYG00000044989) #20 RNF111 (ENSOMYG00000044959) #21 ccnb2 (ENSOMYG00000044948) #22 MYO1E (ENSOMYG00000042264) #24 mtmr10 (ENSOMYG00000041001) ENSOMYG00000040903 ENSOMYG00000040899 ap1g1 (ENSOMYG00000040726) ENSOMYG00000040591 marveld3 (ENSOMYG00000040502) ENSOMYG00000038644 ENSOMYG00000038231 zfhx3b (ENSOMYG00000038199) ENSOMYG00000072589 ENSOMYG00000038178 dhx38 (ENSOMYG00000037744) cyb5b (ENSOMYG00000053865) zgc:162592 (ENSOMYG00000037656) Oncorhynchus_a ANCESTRAL SPECIES 28 ENSGT00390000018333.a #7 ENSGT00730000111210.h #8 ENSGT00940000163854.b.e ENSGT00940000155047.ac.a.a.a #10 ENSGT00940000154489.A.c.c #11 ENSGT00950000183065.A.l #12 ENSGT00950000183065.D.b #13 ENSGT00940000158898.f.b #15 ENSGT00940000164919.b.d.b ENSGT00940000157602.d #17 ENSGT00940000164516.a.h.a ENSGT01030000234641.b.a.b.a.a.h.b.b ENSGT00390000016607.a.o.a #19 ENSGT00940000156573.h #20 ENSGT00940000157691.h #21 ENSGT00940000155405.cb #22 ENSGT00940000157461.c.b #24 ENSGT00940000156900.n.b.a.a ENSGT00390000005939.b.k ENSGT00940000159421.i ENSGT00940000159421.j.a ENSGT00950000182838.B.a.a.h ENSGT00940000159841.f ENSGT00950000183102.A.b.b ENSGT00550000074994.e ENSGT00940000157410.d.a ENSGT00940000165027.h.b ENSGT00940000156149.B.h.b ENSGT00390000012700 ENSGT00940000156898.j.a ENSGT00940000155584.z.b Coho salmon MODERN SPECIES 28 RFX7 (ENSOKIG00005050445) tex9 (ENSOKIG00005050435) #7 ENSOKIG00005050426 TCF12 (ENSOKIG00005050378) #10 CGNL1 (ENSOKIG00005050351) #11 MYZAP (ENSOKIG00005050342) #12 polr2m (ENSOKIG00005050337) #13 aldh1a2 (ENSOKIG00005049959) #15 aqp9b (ENSOKIG00005049859) lipca (ENSOKIG00005049855) #17 ENSOKIG00005049852 adam10a (ENSOKIG00005049779) MINDY2 (ENSOKIG00005049740) #19 sltm (ENSOKIG00005049690) #20 RNF111 (ENSOKIG00005049645) #21 ccnb2 (ENSOKIG00005049632) #22 MYO1E (ENSOKIG00005048322) #24 mtmr10 (ENSOKIG00005047761) ATXN1L (ENSOKIG00005047704) ZNF821 (ENSOKIG00005047701) ap1g1 (ENSOKIG00005047481) PHLPP2 (ENSOKIG00005047302) marveld3 (ENSOKIG00005047260) USP10 (ENSOKIG00005046233) CRISPLD2 (ENSOKIG00005046070) ENSOKIG00005046059 ENSOKIG00005046050 zfhx3b (ENSOKIG00005046031) ENSOKIG00005045972 dhx38 (ENSOKIG00005045471) cyb5b (ENSOKIG00005045418) Chinook salmon MODERN SPECIES 3 ogfod1 (ENSOTSG00005016758) tradd (ENSOTSG00005016756) ENSOTSG00005016755 TCF12 (ENSOTSG00005016743) #10 CGNL1 (ENSOTSG00005016713) #11 MYZAP (ENSOTSG00005016707) #12 ENSOTSG00005016678 aldh1a2 (ENSOTSG00005034114) #15 aqp9b (ENSOTSG00005034098) lipca (ENSOTSG00005034093) #17 ENSOTSG00005034091 adam10a (ENSOTSG00005033674) MINDY2 (ENSOTSG00005033664) #19 sltm (ENSOTSG00005033644) #20 rnf111 (ENSOTSG00005033594) #21 ccnb2 (ENSOTSG00005033591) #22 MYO1E (ENSOTSG00005033013) #24 mtmr10 (ENSOTSG00005031210) ATXN1L (ENSOTSG00005031205) ZNF821 (ENSOTSG00005031201) ap1g1 (ENSOTSG00005030641) PHLPP2 (ENSOTSG00005030566) marveld3 (ENSOTSG00005030563) ENSOTSG00005026388 CRISPLD2 (ENSOTSG00005026365) ENSOTSG00005026364 zfhx3b (ENSOTSG00005026361) dhx38 (ENSOTSG00005026324) cyb5b (ENSOTSG00005026317) zgc:162592 (ENSOTSG00005026316) CPNE7 (ENSOTSG00005024994) Salmo ANCESTRAL SPECIES 27 ENSGT00390000018333.a #7 ENSGT00730000111210.h #8 ENSGT00940000163854.b.e ENSGT00940000155047.ac.a.a.a #10 ENSGT00940000154489.A.c.c #11 ENSGT00950000183065.A.l #12 ENSGT00950000183065.D.b #13 ENSGT00940000158898.f.a.a.a #15 ENSGT00940000164919.b.c.b ENSGT00940000157602.d #17 ENSGT00940000164516.a.h.b ENSGT01030000234641.b.a.b.a.a.h.b.a ENSGT00390000016607.a.o.a #19 ENSGT00940000156573.h #20 ENSGT00940000157691.h #21 ENSGT00940000155405.cb #22 ENSGT00940000157461.c.b #24 ENSGT00940000156900.n.a ENSGT00390000005939.b.k ENSGT00940000159421.i ENSGT00940000159421.j.a ENSGT00950000182838.B.a.a.h ENSGT00940000159841.f ENSGT00950000183102.A.b.b ENSGT00550000074994.e ENSGT00940000157410.d.a ENSGT00940000165027.g.a ENSGT00940000156149.B.h.b ENSGT00390000012700 ENSGT00940000156898.j.a ENSGT00940000155584.z.b Atlantic salmon MODERN SPECIES 2 ENSSSAG00000004838 ENSSSAG00000004823 #10 ENSSSAG00000004152 #10 ENSSSAG00000098345 cgnl1 (ENSSSAG00000004092) #11 MYZAP (ENSSSAG00000080951) #12 polr2m (ENSSSAG00000004050) #13 aldh1a2 (ENSSSAG00000004552) #15 aqp9b (ENSSSAG00000094256) lipca (ENSSSAG00000003952) #17 ENSSSAG00000076061 adam10 (ENSSSAG00000080438) fam63b (ENSSSAG00000113578) #19 sltm (ENSSSAG00000073300) #20 rnf111 (ENSSSAG00000073003) #21 ccnb2 (ENSSSAG00000072975) #22 MYO1E (ENSSSAG00000079260) #24 mtmr10 (ENSSSAG00000072451) ENSSSAG00000102264 ENSSSAG00000111792 ap1g1 (ENSSSAG00000078554) ENSSSAG00000078444 ENSSSAG00000120225 marveld3 (ENSSSAG00000078415) ENSSSAG00000077429 ENSSSAG00000077236 ENSSSAG00000113547 ENSSSAG00000116559 zfhx3b (ENSSSAG00000101307) ENSSSAG00000072427 ENSSSAG00000072426 Huchen MODERN SPECIES 1646 adam10a (ENSHHUG00000037647) ENSHHUG00000037716 MINDY2 (ENSHHUG00000037724) #19 sltm (ENSHHUG00000037731) #20 rnf111 (ENSHHUG00000037753) #21 ccnb2 (ENSHHUG00000037769) #22 MYO1E (ENSHHUG00000037783) #24 ENSHHUG00000037846 Northern pike MODERN SPECIES 1 nedd4a (ENSELUG00000012706) ENSELUG00000012813 tex9 (ENSELUG00000012830) #7 mns1 (ENSELUG00000012842) #8 ENSELUG00000012864 TCF12 (ENSELUG00000013010) #10 CGNL1 (ENSELUG00000013069) #11 MYZAP (ENSELUG00000013126) #12 polr2m (ENSELUG00000013144) #13 aldh1a2 (ENSELUG00000013199) #15 aqp9b (ENSELUG00000013223) adam10a (ENSELUG00000013272) MINDY2 (ENSELUG00000013332) #19 sltm (ENSELUG00000013388) #20 rnf111 (ENSELUG00000013469) #21 ccnb2 (ENSELUG00000013642) #22 MYO1E (ENSELUG00000013729) #24 mtmr10 (ENSELUG00000013811) ATXN1L (ENSELUG00000013842) ZNF821 (ENSELUG00000013877) ap1g1 (ENSELUG00000013947) PHLPP2 (ENSELUG00000014020) marveld3 (ENSELUG00000014036) USP10 (ENSELUG00000014093) CRISPLD2 (ENSELUG00000014157) ENSELUG00000014242 zfhx3b (ENSELUG00000014311) ENSELUG00000014331 dhx38 (ENSELUG00000014379) cyb5b (ENSELUG00000014414) zgc:162592 (ENSELUG00000014432) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 37 ENSGT00940000155943.a ENSGT00940000158905 ENSGT01050000244970.b.j.a ENSGT00390000018333 #7 ENSGT00940000163854.b ENSGT00940000155047.yb #10 ENSGT00940000154489.A.e #11 ENSGT00950000183065.A.g #12 ENSGT00950000183065.D #13 ENSGT00940000158898.a #15 ENSGT00940000164919.a ENSGT00940000164516.a ENSGT00390000016607.a #19 ENSGT00940000156573 #20 ENSGT00940000157691.c #21 ENSGT00940000155405.db #22 ENSGT00940000157461.a.a #24 ENSGT00940000156900.t ENSGT00940000158943.e.a.a ENSGT00390000008240.c ENSGT00940000163963.a ENSGT00550000074781 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A.sb ENSGT00530000063675.a.n ENSGT01040000240503.A.a.a.e ENSGT00390000018400.a ENSGT00940000154914 ENSGT00940000155333.A ENSGT00530000063106.B P. kingsleyae MODERN SPECIES 14 PRTG (ENSPKIG00000021861) nedd4a (ENSPKIG00000021965) RFX7 (ENSPKIG00000022174) tex9 (ENSPKIG00000022193) #7 ENSPKIG00000022213 TCF12 (ENSPKIG00000022269) #10 CGNL1 (ENSPKIG00000022367) #11 MYZAP (ENSPKIG00000022410) #12 ENSPKIG00000022476 aldh1a2 (ENSPKIG00000022504) #15 ENSPKIG00000022537 adam10a (ENSPKIG00000022560) MINDY2 (ENSPKIG00000022684) #19 sltm (ENSPKIG00000022760) #20 rnf111 (ENSPKIG00000022818) #21 ccnb2 (ENSPKIG00000022862) #22 MYO1E (ENSPKIG00000022937) #24 Asian bonytongue MODERN SPECIES 2 PRTG (ENSSFOG00015024114) nedd4a (ENSSFOG00015024111) RFX7 (ENSSFOG00015024110) tex9 (ENSSFOG00015024108) #7 ENSSFOG00015024105 TCF12 (ENSSFOG00015024100) #10 CGNL1 (ENSSFOG00015024097) #11 MYZAP (ENSSFOG00015024096) #12 polr2m (ENSSFOG00015024095) #13 aldh1a2 (ENSSFOG00015024093) #15 ENSSFOG00015025649 adam10a (ENSSFOG00015024090) MINDY2 (ENSSFOG00015024089) #19 sltm (ENSSFOG00015024088) #20 rnf111 (ENSSFOG00015024085) #21 ccnb2 (ENSSFOG00015024081) #22 MYO1E (ENSSFOG00015024079) #24 MTMR10 (ENSSFOG00015024077) APBA2 (ENSSFOG00015024075) ENSSFOG00015024073 ENSSFOG00015024069 sord (ENSSFOG00015024067) terb2 (ENSSFOG00015024060) TJP1 (ENSSFOG00015024056) ENSSFOG00015027780 ENSSFOG00015024053 GOLM2 (ENSSFOG00015032150) ENSSFOG00015024048 eif3ja (ENSSFOG00015026344) rab11a (ENSSFOG00015024042) ENSSFOG00015024039 Osteoglossiformes ANCESTRAL SPECIES 132 ENSGT00950000183103.c.b ENSGT00940000155174 ENSGT00950000183105.B ENSGT00940000156218.e ENSGT00940000166643.b ENSGT00940000155943.b ENSGT01050000244970.b.j.b ENSGT00730000111210 #8 ENSGT00940000155047.`c #10 ENSGT00940000154489.A.f #11 ENSGT00950000183065.A.h #12 ENSGT00940000158898.b #15 ENSGT00940000157602 #17 ENSGT00940000164516.b ENSGT00940000157691.d #21 ENSGT00940000155405.eb #22 ENSGT00940000157461.a.b #24 ENSGT00940000156900.s ENSGT00390000018637 ENSGT00390000011359 ENSGT00940000153941.b ENSGT00940000158943.e.a.b ENSGT00390000008240.d ENSGT00940000163963.b ENSGT00940000155164.a.a ENSGT00530000063335.A.rb.a ENSGT00530000063675.a.m ENSGT01040000240503.A.a.a.f ENSGT00390000018400.b ENSGT00390000008152.B.b.e ENSGT00950000183129.a P. kingsleyae MODERN SPECIES 16 rsl24d1 (ENSPKIG00000017615) RAB27A (ENSPKIG00000017595) ENSPKIG00000017481 ENSPKIG00000017440 NEDD4 (ENSPKIG00000017397) RFX7 (ENSPKIG00000017349) mns1 (ENSPKIG00000017328) #8 TCF12 (ENSPKIG00000017260) #10 trmt2b (ENSPKIG00000017232) CGNL1 (ENSPKIG00000017200) #11 MYZAP (ENSPKIG00000017167) #12 aldh1a2 (ENSPKIG00000017102) #15 lipca (ENSPKIG00000017054) #17 ENSPKIG00000016991 rnf111 (ENSPKIG00000016836) #21 ccnb2 (ENSPKIG00000016757) #22 MYO1E (ENSPKIG00000016721) #24 ENSPKIG00000016706 ENSPKIG00000016684 mtmr10 (ENSPKIG00000016642) fan1 (ENSPKIG00000016611) mphosph10 (ENSPKIG00000016578) mcee (ENSPKIG00000016546) ENSPKIG00000016522 ENSPKIG00000016504 ENSPKIG00000016475 TJP1 (ENSPKIG00000016251) ENTREP2 (ENSPKIG00000016160) GOLM2 (ENSPKIG00000016137) CTDSPL2 (ENSPKIG00000016045) EIF3J (ENSPKIG00000016009) Asian bonytongue MODERN SPECIES 22 arfgap2 (ENSSFOG00015020216) ENSSFOG00015020264 large2 (ENSSFOG00015020290) thraa (ENSSFOG00015024188) DHX8 (ENSSFOG00015024187) etv4 (ENSSFOG00015024186) ENSSFOG00015029737 meox1 (ENSSFOG00015024185) SOST (ENSSFOG00015028325) ENSSFOG00015017054 ENSSFOG00015025744 aldh1a2 (ENSSFOG00015014089) #15 lipca (ENSSFOG00015014124) #17 ENSSFOG00015014145 rnf111 (ENSSFOG00015014203) #21 ccnb2 (ENSSFOG00015014264) #22 MYO1E (ENSSFOG00015014384) #24 mtmr10 (ENSSFOG00015014480) fan1 (ENSSFOG00015014516) mphosph10 (ENSSFOG00015014531) mcee (ENSSFOG00015025514) APBA2 (ENSSFOG00015014574) ENSSFOG00015028526 ENSSFOG00015014714 TJP1 (ENSSFOG00015014982) ENTREP2 (ENSSFOG00015015224) ENSSFOG00015030588 CTDSPL2 (ENSSFOG00015015311) cilp (ENSSFOG00015015411) parp16 (ENSSFOG00015015435) IGDCC3 (ENSSFOG00015015481) Spotted gar MODERN SPECIES 669 RFX7 (ENSLOCG00000013505) tex9 (ENSLOCG00000013508) #7 mns1 (ENSLOCG00000013519) #8 ENSLOCG00000013531 tcf12 (ENSLOCG00000013539) #10 CGNL1 (ENSLOCG00000013547) #11 MYZAP (ENSLOCG00000013563) #12 aldh1a2 (ENSLOCG00000013574) #15 aqp9b (ENSLOCG00000013583) ENSLOCG00000013591 lipca (ENSLOCG00000013598) #17 adam10a (ENSLOCG00000013609) MINDY2 (ENSLOCG00000013626) #19 sltm (ENSLOCG00000013629) #20 rnf111 (ENSLOCG00000013642) #21 ccnb2 (ENSLOCG00000013651) #22 MYO1E (ENSLOCG00000013657) #24 FAM81A (ENSLOCG00000013668) #25 mtmr10 (ENSLOCG00000013672) fan1 (ENSLOCG00000013674) mphosph10 (ENSLOCG00000013681) mcee (ENSLOCG00000013690) APBA2 (ENSLOCG00000013693) ENTREP2 (ENSLOCG00000013697) TJP1 (ENSLOCG00000013706) terb2 (ENSLOCG00000013718) ENSLOCG00000013720 sord (ENSLOCG00000013722) DUOX2 (ENSLOCG00000013727) DUOXA2 (ENSLOCG00000013747) GOLM2 (ENSLOCG00000013752) Reedfish MODERN SPECIES 8 ENSECRG00000020697 ENSECRG00000020717 tcf12 (ENSECRG00000020790) #10 CGNL1 (ENSECRG00000020873) #11 MYZAP (ENSECRG00000020923) #12 polr2m (ENSECRG00000020969) #13 aldh1a2 (ENSECRG00000020978) #15 aqp9b (ENSECRG00000020994) ENSECRG00000021021 lipca (ENSECRG00000021031) #17 adam10a (ENSECRG00000021057) MINDY2 (ENSECRG00000021090) #19 sltm (ENSECRG00000021115) #20 ENSECRG00000021138 #20 rnf111 (ENSECRG00000021147) #21 ccnb2 (ENSECRG00000021163) #22 MYO1E (ENSECRG00000021197) #24 FAM81A (ENSECRG00000021279) #25 mtmr10 (ENSECRG00000021307) fan1 (ENSECRG00000021339) mcee (ENSECRG00000021366) mphosph10 (ENSECRG00000021377) ENSECRG00000021395 TJP1 (ENSECRG00000021434) ENSECRG00000021492 ENSECRG00000021501 ENSECRG00000021516 ENSECRG00000021529 ENSECRG00000021550 ENSECRG00000021555 ENSECRG00000021568 Elephant shark MODERN SPECIES 1490 RFX7 (ENSCMIG00000000284) tex9 (ENSCMIG00000000268) #7 mns1 (ENSCMIG00000000250) #8 ENSCMIG00000000226 tcf12 (ENSCMIG00000020065) #10 CGNL1 (ENSCMIG00000020063) #11 ENSCMIG00000020061 #12 ENSCMIG00000020060 #13 aldh1a2 (ENSCMIG00000020000) #15 AQP9 (ENSCMIG00000019970) #16 lipca (ENSCMIG00000019965) #17 adam10a (ENSCMIG00000019962) MINDY2 (ENSCMIG00000019961) #19 sltm (ENSCMIG00000019960) #20 rnf111 (ENSCMIG00000019959) #21 ccnb2 (ENSCMIG00000019958) #22 MYO1E (ENSCMIG00000019954) #24 ENSCMIG00000019944 #25 ENSCMIG00000019943 ENSCMIG00000019941 SHC4 (ENSCMIG00000019940) SECISBP2L (ENSCMIG00000019938) cops2 (ENSCMIG00000019936) galk2 (ENSCMIG00000019932) fgf7 (ENSCMIG00000019928) ENSCMIG00000019927 DTWD1 (ENSCMIG00000019926) ENSCMIG00000019916 ATP8B4 (ENSCMIG00000019888) WDR72 (ENSCMIG00000019874) atosa (ENSCMIG00000019862) Cyclostomata ANCESTRAL SPECIES 4 ENSGT00940000157602.h #17 ENSGT00940000164516.d ENSGT00390000016607 #19 ENSGT00390000018830 ENSGT00940000157691 #21 ENSGT00940000155405 #22 ENSGT00940000157461 #24 Lamprey MODERN SPECIES 2364 ccnb2 (ENSPMAG00000000211) #22 Hagfish MODERN SPECIES 384 ENSEBUG00000008672 ENSEBUG00000011867 trpm1a (ENSEBUG00000007857) ENSEBUG00000007945 ENSEBUG00000015147 #17 ENSEBUG00000010601 ENSEBUG00000013030 MINDY1 (ENSEBUG00000005575) #19 ENSEBUG00000016643 ENSEBUG00000014108 ENSEBUG00000010161 #21 ENSEBUG00000008138 ccnb2 (ENSEBUG00000012841) #22 ENSEBUG00000015639 #24 CERS1 (ENSEBUG00000011580) ENSEBUG00000010988 ENSEBUG00000008718 ENSEBUG00000001531 ENSEBUG00000004427 ENSEBUG00000008346 ENSEBUG00000008270 ENSEBUG00000011810 ENSEBUG00000012678 ENSEBUG00000004323 ENSEBUG00000011412 ENSEBUG00000008920 ENSEBUG00000013979 ENSEBUG00000010410