Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Glires ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Rodentia ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Rodentia_B ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Muroidea ANCESTRAL SPECIES 3 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00940000165942 ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 Prairie vole MODERN SPECIES 1 Trappc3 (ENSMOCG00000013847) #7 Map7d1 (ENSMOCG00000019568) #8 ENSMOCG00000005500 #9 ENSMOCG00000015795 #10 Eva1b (ENSMOCG00000017606) #11 Stk40 (ENSMOCG00000019033) #12 Lsm10 (ENSMOCG00000021943) #13 Oscp1 (ENSMOCG00000001484) #14 Mrps15 (ENSMOCG00000004474) #15 Csf3r (ENSMOCG00000015592) #16 Grik3 (ENSMOCG00000009075) #17 ENSMOCG00000009417 #18 Zc3h12a (ENSMOCG00000001899) #19 Meaf6 (ENSMOCG00000019012) #20 Snip1 (ENSMOCG00000008716) #21 Dnali1 (ENSMOCG00000003328) #22 Gnl2 (ENSMOCG00000016365) #23 Rspo1 (ENSMOCG00000022465) #24 9930104L06Rik (ENSMOCG00000022276) #25 Cdca8 (ENSMOCG00000013240) #26 Epha10 (ENSMOCG00000022678) #27 Maneal (ENSMOCG00000021847) #28 ENSMOCG00000009295 #29 1110065P20Rik (ENSMOCG00000012877) #30 Mtf1 (ENSMOCG00000007669) #31 Inpp5b (ENSMOCG00000017902) #32 ENSMOCG00000019939 #33 Fhl3 (ENSMOCG00000013490) #34 Utp11 (ENSMOCG00000021894) #35 ENSMOCG00000012010 #36 Rragc (ENSMOCG00000014353) #37 Northern American deer mouse MODERN SPECIES 11 Col8a2 (ENSPEMG00000030728) Trappc3 (ENSPEMG00000017774) #7 Map7d1 (ENSPEMG00000018714) #8 Thrap3 (ENSPEMG00000023512) #9 Sh3d21 (ENSPEMG00000022518) Eva1b (ENSPEMG00000017056) #11 Stk40 (ENSPEMG00000010968) #12 Lsm10 (ENSPEMG00000029690) #13 Oscp1 (ENSPEMG00000021248) #14 Mrps15 (ENSPEMG00000022897) #15 Csf3r (ENSPEMG00000021902) #16 Grik3 (ENSPEMG00000020816) #17 Zc3h12a (ENSPEMG00000024080) #19 Meaf6 (ENSPEMG00000023877) #20 Snip1 (ENSPEMG00000021090) #21 Dnali1 (ENSPEMG00000020987) #22 Gnl2 (ENSPEMG00000021234) #23 Rspo1 (ENSPEMG00000021279) #24 9930104L06Rik (ENSPEMG00000022126) #25 Cdca8 (ENSPEMG00000022723) #26 ENSPEMG00000027637 #27 ENSPEMG00000020548 #27 Maneal (ENSPEMG00000021002) #28 Yrdc (ENSPEMG00000016985) ENSPEMG00000030619 Mtf1 (ENSPEMG00000021132) #31 Inpp5b (ENSPEMG00000021223) #32 Sf3a3 (ENSPEMG00000020805) #33 Fhl3 (ENSPEMG00000020662) #34 Utp11 (ENSPEMG00000020923) #35 Pou3f1 (ENSPEMG00000026905) Cricetinae ANCESTRAL SPECIES 5 ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b.e #12 ENSGT00950000182986.b.f #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Golden Hamster MODERN SPECIES 783 Adprs (ENSMAUG00000017195) Col8a2 (ENSMAUG00000000665) Trappc3 (ENSMAUG00000019950) #7 ENSMAUG00000016543 #8 Thrap3 (ENSMAUG00000019723) #9 Sh3d21 (ENSMAUG00000014506) Eva1b (ENSMAUG00000010494) #11 Stk40 (ENSMAUG00000014659) #12 Oscp1 (ENSMAUG00000004945) #14 Mrps15 (ENSMAUG00000021202) #15 Csf3r (ENSMAUG00000001404) #16 Grik3 (ENSMAUG00000018300) #17 Zc3h12a (ENSMAUG00000012893) #19 Meaf6 (ENSMAUG00000009391) #20 Snip1 (ENSMAUG00000015995) #21 Dnali1 (ENSMAUG00000008689) #22 Gnl2 (ENSMAUG00000018529) #23 Rspo1 (ENSMAUG00000017138) #24 9930104L06Rik (ENSMAUG00000001306) #25 Cdca8 (ENSMAUG00000001752) #26 Epha10 (ENSMAUG00000019172) #27 Maneal (ENSMAUG00000019065) #28 ENSMAUG00000003715 1110065P20Rik (ENSMAUG00000011358) #30 Mtf1 (ENSMAUG00000010101) #31 Inpp5b (ENSMAUG00000020871) #32 Sf3a3 (ENSMAUG00000013931) #33 Fhl3 (ENSMAUG00000013735) #34 Utp11 (ENSMAUG00000008360) #35 Pou3f1 (ENSMAUG00000014508) ENSMAUG00000005081 Chinese hamster chok1gshd MODERN SPECIES 111 ENSCGRG00001020476 Trappc3 (ENSCGRG00001020776) #7 Map7d1 (ENSCGRG00001022850) #8 Thrap3 (ENSCGRG00001003105) #9 Sh3d21 (ENSCGRG00001013521) Eva1b (ENSCGRG00001016486) #11 ENSCGRG00001000587 #12 ENSCGRG00001004317 #13 Oscp1 (ENSCGRG00001012967) #14 Mrps15 (ENSCGRG00001019050) #15 Csf3r (ENSCGRG00001021810) #16 Grik3 (ENSCGRG00001012192) #17 Zc3h12a (ENSCGRG00001015497) #19 Meaf6 (ENSCGRG00001006760) #20 Snip1 (ENSCGRG00001010414) #21 Dnali1 (ENSCGRG00001012511) #22 Gnl2 (ENSCGRG00001016733) #23 Rspo1 (ENSCGRG00001017490) #24 9930104L06Rik (ENSCGRG00001024913) #25 Cdca8 (ENSCGRG00001009411) #26 Epha10 (ENSCGRG00001016839) #27 Maneal (ENSCGRG00001013857) #28 ENSCGRG00001014496 1110065P20Rik (ENSCGRG00001015075) #30 Mtf1 (ENSCGRG00001011213) #31 Inpp5b (ENSCGRG00001013248) #32 Sf3a3 (ENSCGRG00001011320) #33 Fhl3 (ENSCGRG00001024120) #34 Utp11 (ENSCGRG00001024839) #35 Pou3f1 (ENSCGRG00001004375) ENSCGRG00001025020 Murinae ANCESTRAL SPECIES 2 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Mus ANCESTRAL SPECIES 3 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Mus_A ANCESTRAL SPECIES 3 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a.f #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Mus_B ANCESTRAL SPECIES 5 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a.f #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Mouse MODERN SPECIES 13 Col8a2 (ENSMUSG00000056174) Trappc3 (ENSMUSG00000028847) #7 Map7d1 (ENSMUSG00000028849) #8 Thrap3 (ENSMUSG00000043962) #9 Sh3d21 (ENSMUSG00000073758) Eva1b (ENSMUSG00000050212) #11 Stk40 (ENSMUSG00000042608) #12 Lsm10 (ENSMUSG00000050188) #13 Oscp1 (ENSMUSG00000042616) #14 Mrps15 (ENSMUSG00000028861) #15 Csf3r (ENSMUSG00000028859) #16 Grik3 (ENSMUSG00000001985) #17 Zc3h12a (ENSMUSG00000042677) #19 Meaf6 (ENSMUSG00000028863) #20 Snip1 (ENSMUSG00000050213) #21 Dnali1 (ENSMUSG00000042707) #22 Gnl2 (ENSMUSG00000028869) #23 Rspo1 (ENSMUSG00000028871) #24 9930104L06Rik (ENSMUSG00000044730) #25 Cdca8 (ENSMUSG00000028873) #26 Epha10 (ENSMUSG00000028876) #27 Maneal (ENSMUSG00000042763) #28 Yrdc (ENSMUSG00000028889) 1110065P20Rik (ENSMUSG00000078570) #30 Mtf1 (ENSMUSG00000028890) #31 Inpp5b (ENSMUSG00000028894) #32 Sf3a3 (ENSMUSG00000028902) #33 Fhl3 (ENSMUSG00000032643) #34 Utp11 (ENSMUSG00000028907) #35 Pou3f1 (ENSMUSG00000090125) Rragc (ENSMUSG00000028646) #37 Mus_C ANCESTRAL SPECIES 2 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a.f #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 spretus MODERN SPECIES 13 Col8a2 (MGP_SPRETEiJ_G0027453) Trappc3 (MGP_SPRETEiJ_G0027452) #7 Map7d1 (MGP_SPRETEiJ_G0027451) #8 Thrap3 (MGP_SPRETEiJ_G0027450) #9 Sh3d21 (MGP_SPRETEiJ_G0027449) Eva1b (MGP_SPRETEiJ_G0027448) #11 Stk40 (MGP_SPRETEiJ_G0027447) #12 Lsm10 (MGP_SPRETEiJ_G0027446) #13 Oscp1 (MGP_SPRETEiJ_G0027445) #14 Mrps15 (MGP_SPRETEiJ_G0027444) #15 Csf3r (MGP_SPRETEiJ_G0027443) #16 Grik3 (MGP_SPRETEiJ_G0027442) #17 Zc3h12a (MGP_SPRETEiJ_G0027441) #19 Meaf6 (MGP_SPRETEiJ_G0027440) #20 Snip1 (MGP_SPRETEiJ_G0027439) #21 Dnali1 (MGP_SPRETEiJ_G0027438) #22 Gnl2 (MGP_SPRETEiJ_G0027437) #23 Rspo1 (MGP_SPRETEiJ_G0027436) #24 Cdca8 (MGP_SPRETEiJ_G0027435) #26 Epha10 (MGP_SPRETEiJ_G0027434) #27 Maneal (MGP_SPRETEiJ_G0027433) #28 Yrdc (MGP_SPRETEiJ_G0027432) 1110065P20Rik (MGP_SPRETEiJ_G0027431) #30 Mtf1 (MGP_SPRETEiJ_G0027430) #31 Inpp5b (MGP_SPRETEiJ_G0027429) #32 Sf3a3 (MGP_SPRETEiJ_G0027428) #33 Fhl3 (MGP_SPRETEiJ_G0027427) #34 Utp11 (MGP_SPRETEiJ_G0027426) #35 Pou3f1 (MGP_SPRETEiJ_G0027425) MGP_SPRETEiJ_G0027424 Rragc (MGP_SPRETEiJ_G0027423) #37 Steppe mouse MODERN SPECIES 3362 Col8a2 (ENSMSIG00000016393) Trappc3 (ENSMSIG00000016379) #7 Map7d1 (ENSMSIG00000016217) #8 Thrap3 (ENSMSIG00000016164) #9 Sh3d21 (ENSMSIG00000016082) Eva1b (ENSMSIG00000016045) #11 Stk40 (ENSMSIG00000016008) #12 Lsm10 (ENSMSIG00000016001) #13 Oscp1 (ENSMSIG00000015894) #14 Mrps15 (ENSMSIG00000015874) #15 Csf3r (ENSMSIG00000015810) #16 Grik3 (ENSMSIG00000015725) #17 Zc3h12a (ENSMSIG00000015699) #19 Meaf6 (ENSMSIG00000015611) #20 Snip1 (ENSMSIG00000015594) #21 ENSMSIG00000015561 #22 Gnl2 (ENSMSIG00000015516) #23 Rspo1 (ENSMSIG00000015498) #24 9930104L06Rik (ENSMSIG00000015482) #25 Cdca8 (ENSMSIG00000015423) #26 Epha10 (ENSMSIG00000015368) #27 Maneal (ENSMSIG00000015357) #28 Yrdc (ENSMSIG00000015341) 1110065P20Rik (ENSMSIG00000015284) #30 Mtf1 (ENSMSIG00000015251) #31 Inpp5b (ENSMSIG00000015112) #32 Sf3a3 (ENSMSIG00000015045) #33 Fhl3 (ENSMSIG00000015008) #34 Utp11 (ENSMSIG00000014973) #35 Pou3f1 (ENSMSIG00000014969) ENSMSIG00000014950 Ryukyu mouse MODERN SPECIES 13 Col8a2 (MGP_CAROLIEiJ_G0026474) Trappc3 (MGP_CAROLIEiJ_G0026473) #7 Map7d1 (MGP_CAROLIEiJ_G0026472) #8 MGP_CAROLIEiJ_G0026471 #9 Sh3d21 (MGP_CAROLIEiJ_G0026470) Eva1b (MGP_CAROLIEiJ_G0026469) #11 Stk40 (MGP_CAROLIEiJ_G0026468) #12 Lsm10 (MGP_CAROLIEiJ_G0026467) #13 Oscp1 (MGP_CAROLIEiJ_G0026466) #14 Mrps15 (MGP_CAROLIEiJ_G0026465) #15 Csf3r (MGP_CAROLIEiJ_G0026464) #16 Grik3 (MGP_CAROLIEiJ_G0026463) #17 Zc3h12a (MGP_CAROLIEiJ_G0026462) #19 Meaf6 (MGP_CAROLIEiJ_G0026461) #20 Snip1 (MGP_CAROLIEiJ_G0026460) #21 Dnali1 (MGP_CAROLIEiJ_G0026459) #22 Gnl2 (MGP_CAROLIEiJ_G0026458) #23 Rspo1 (MGP_CAROLIEiJ_G0026457) #24 Cdca8 (MGP_CAROLIEiJ_G0026456) #26 Epha10 (MGP_CAROLIEiJ_G0026455) #27 Maneal (MGP_CAROLIEiJ_G0026454) #28 Yrdc (MGP_CAROLIEiJ_G0026453) 1110065P20Rik (MGP_CAROLIEiJ_G0026452) #30 Mtf1 (MGP_CAROLIEiJ_G0026451) #31 Inpp5b (MGP_CAROLIEiJ_G0026450) #32 Sf3a3 (MGP_CAROLIEiJ_G0026449) #33 Fhl3 (MGP_CAROLIEiJ_G0026448) #34 Utp11 (MGP_CAROLIEiJ_G0026447) #35 Pou3f1 (MGP_CAROLIEiJ_G0026446) MGP_CAROLIEiJ_G0026445 MGP_CAROLIEiJ_G0026444 Shrew mouse MODERN SPECIES 19 Col8a2 (MGP_PahariEiJ_G0028805) Trappc3 (MGP_PahariEiJ_G0028804) #7 Map7d1 (MGP_PahariEiJ_G0028803) #8 MGP_PahariEiJ_G0028802 #9 MGP_PahariEiJ_G0028801 Eva1b (MGP_PahariEiJ_G0028800) #11 Stk40 (MGP_PahariEiJ_G0028799) #12 Lsm10 (MGP_PahariEiJ_G0028798) #13 Oscp1 (MGP_PahariEiJ_G0028797) #14 Mrps15 (MGP_PahariEiJ_G0028796) #15 Csf3r (MGP_PahariEiJ_G0028795) #16 Grik3 (MGP_PahariEiJ_G0028794) #17 Zc3h12a (MGP_PahariEiJ_G0028793) #19 Meaf6 (MGP_PahariEiJ_G0028792) #20 Snip1 (MGP_PahariEiJ_G0028791) #21 Dnali1 (MGP_PahariEiJ_G0028790) #22 Gnl2 (MGP_PahariEiJ_G0028789) #23 Rspo1 (MGP_PahariEiJ_G0028788) #24 MGP_PahariEiJ_G0028787 #26 Epha10 (MGP_PahariEiJ_G0028786) #27 Maneal (MGP_PahariEiJ_G0028785) #28 Yrdc (MGP_PahariEiJ_G0028784) 1110065P20Rik (MGP_PahariEiJ_G0028783) #30 Mtf1 (MGP_PahariEiJ_G0028782) #31 Inpp5b (MGP_PahariEiJ_G0028781) #32 Sf3a3 (MGP_PahariEiJ_G0028780) #33 Fhl3 (MGP_PahariEiJ_G0028779) #34 Utp11 (MGP_PahariEiJ_G0028778) #35 Pou3f1 (MGP_PahariEiJ_G0028777) MGP_PahariEiJ_G0028776 MGP_PahariEiJ_G0028775 Rat MODERN SPECIES 15 Trappc3 (ENSRNOG00000010550) #7 Map7d1 (ENSRNOG00000010237) #8 Thrap3 (ENSRNOG00000009977) #9 Sh3d21 (ENSRNOG00000024566) Eva1b (ENSRNOG00000024818) #11 Stk40 (ENSRNOG00000025679) #12 Lsm10 (ENSRNOG00000068296) #13 Oscp1 (ENSRNOG00000026978) #14 Mrps15 (ENSRNOG00000008279) #15 Csf3r (ENSRNOG00000008759) #16 ENSRNOG00000063670 Grik3 (ENSRNOG00000008992) #17 Zc3h12a (ENSRNOG00000009131) #19 Meaf6 (ENSRNOG00000009309) #20 Snip1 (ENSRNOG00000024889) #21 Dnali1 (ENSRNOG00000024957) #22 Gnl2 (ENSRNOG00000009430) #23 Rspo1 (ENSRNOG00000009656) #24 C5h1orf109 (ENSRNOG00000025065) #25 Cdca8 (ENSRNOG00000031431) #26 Epha10 (ENSRNOG00000037340) #27 Maneal (ENSRNOG00000025349) #28 Yrdc (ENSRNOG00000025424) C5h1orf122 (ENSRNOG00000042421) #30 Mtf1 (ENSRNOG00000025724) #31 ENSRNOG00000066500 Inpp5b (ENSRNOG00000048506) #32 Sf3a3 (ENSRNOG00000007629) #33 Fhl3 (ENSRNOG00000007541) #34 Utp11 (ENSRNOG00000007174) #35 Pou3f1 (ENSRNOG00000047686) Upper Galilee mountains blind mole rat MODERN SPECIES 1518 Grik3 (ENSNGAG00000015131) #17 Zc3h12a (ENSNGAG00000018725) #19 Meaf6 (ENSNGAG00000017133) #20 Snip1 (ENSNGAG00000013435) #21 Dnali1 (ENSNGAG00000012187) #22 Gnl2 (ENSNGAG00000005990) #23 Rspo1 (ENSNGAG00000018477) #24 9930104L06Rik (ENSNGAG00000016862) #25 Cdca8 (ENSNGAG00000000618) #26 ENSNGAG00000012305 #27 ENSNGAG00000012338 #27 Maneal (ENSNGAG00000016106) #28 Yrdc (ENSNGAG00000019099) 1110065P20Rik (ENSNGAG00000020462) #30 Mtf1 (ENSNGAG00000007045) #31 Inpp5b (ENSNGAG00000002123) #32 Sf3a3 (ENSNGAG00000018032) #33 Fhl3 (ENSNGAG00000000445) #34 Utp11 (ENSNGAG00000013351) #35 Pou3f1 (ENSNGAG00000014834) Lesser Egyptian jerboa MODERN SPECIES 117 Col8a2 (ENSJJAG00000010113) Trappc3 (ENSJJAG00000021017) #7 Map7d1 (ENSJJAG00000018805) #8 ENSJJAG00000024064 #9 ENSJJAG00000013087 Eva1b (ENSJJAG00000000205) #11 Stk40 (ENSJJAG00000013773) #12 Oscp1 (ENSJJAG00000023834) #14 Mrps15 (ENSJJAG00000022198) #15 Csf3r (ENSJJAG00000017669) #16 Grik3 (ENSJJAG00000017762) #17 Zc3h12a (ENSJJAG00000004252) #19 ENSJJAG00000013630 #20 ENSJJAG00000000604 Snip1 (ENSJJAG00000023710) #21 Dnali1 (ENSJJAG00000002274) #22 Gnl2 (ENSJJAG00000010798) #23 Rspo1 (ENSJJAG00000001617) #24 Cdca8 (ENSJJAG00000020145) #26 Epha10 (ENSJJAG00000019817) #27 Maneal (ENSJJAG00000009404) #28 ENSJJAG00000023117 1110065P20Rik (ENSJJAG00000016651) #30 Mtf1 (ENSJJAG00000012657) #31 Inpp5b (ENSJJAG00000024109) #32 Sf3a3 (ENSJJAG00000012404) #33 Fhl3 (ENSJJAG00000002608) #34 Utp11 (ENSJJAG00000024043) #35 Rragc (ENSJJAG00000018398) #37 Mycbp (ENSJJAG00000015657) Akirin1 (ENSJJAG00000008584) Kangaroo rat MODERN SPECIES 352 Zc3h12a (ENSDORG00000012666) #19 Meaf6 (ENSDORG00000012668) #20 Snip1 (ENSDORG00000028338) #21 Dnali1 (ENSDORG00000028615) #22 Gnl2 (ENSDORG00000014429) #23 Rspo1 (ENSDORG00000028461) #24 Cdca8 (ENSDORG00000001551) #26 Epha10 (ENSDORG00000001556) #27 Maneal (ENSDORG00000008785) #28 Yrdc (ENSDORG00000008788) 1110065P20Rik (ENSDORG00000024380) #30 ENSDORG00000008791 Inpp5b (ENSDORG00000008793) #32 Sf3a3 (ENSDORG00000008798) #33 Utp11 (ENSDORG00000005348) #35 Fhl3 (ENSDORG00000029094) #34 Rragc (ENSDORG00000010231) #37 ENSDORG00000024713 Mycbp (ENSDORG00000010232) Rodentia_A ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Degu MODERN SPECIES 171 ENSODEG00000007410 #7 MAP7D1 (ENSODEG00000005198) #8 ENSODEG00000006090 #9 SH3D21 (ENSODEG00000005155) EVA1B (ENSODEG00000006459) #11 STK40 (ENSODEG00000005380) #12 LSM10 (ENSODEG00000019161) #13 OSCP1 (ENSODEG00000005227) #14 MRPS15 (ENSODEG00000005390) #15 CSF3R (ENSODEG00000006285) #16 GRIK3 (ENSODEG00000005952) #17 ENSODEG00000019238 ZC3H12A (ENSODEG00000005643) #19 ENSODEG00000007741 #20 SNIP1 (ENSODEG00000005648) #21 DNALI1 (ENSODEG00000006719) #22 ENSODEG00000005679 RSPO1 (ENSODEG00000005377) #24 CDCA8 (ENSODEG00000005939) #26 EPHA10 (ENSODEG00000005704) #27 ENSODEG00000008311 MANEAL (ENSODEG00000007218) #28 YRDC (ENSODEG00000007401) C1orf122 (ENSODEG00000006893) #30 ENSODEG00000007031 INPP5B (ENSODEG00000007989) #32 ENSODEG00000007470 #33 FHL3 (ENSODEG00000006118) #34 ENSODEG00000006050 #35 POU3F1 (ENSODEG00000006688) ENSODEG00000019423 Long-tailed chinchilla MODERN SPECIES 159 COL8A2 (ENSCLAG00000007777) TRAPPC3 (ENSCLAG00000007951) #7 MAP7D1 (ENSCLAG00000011145) #8 THRAP3 (ENSCLAG00000013043) #9 ENSCLAG00000014941 EVA1B (ENSCLAG00000012665) #11 STK40 (ENSCLAG00000008274) #12 LSM10 (ENSCLAG00000008633) #13 OSCP1 (ENSCLAG00000008808) #14 MRPS15 (ENSCLAG00000015562) #15 CSF3R (ENSCLAG00000013775) #16 GRIK3 (ENSCLAG00000012617) #17 ZC3H12A (ENSCLAG00000008722) #19 MEAF6 (ENSCLAG00000011410) #20 SNIP1 (ENSCLAG00000014140) #21 DNALI1 (ENSCLAG00000014051) #22 GNL2 (ENSCLAG00000012504) #23 RSPO1 (ENSCLAG00000016364) #24 C1orf109 (ENSCLAG00000008471) #25 CDCA8 (ENSCLAG00000010581) #26 ENSCLAG00000011620 #27 ENSCLAG00000008506 #27 MANEAL (ENSCLAG00000010901) #28 YRDC (ENSCLAG00000015012) C1orf122 (ENSCLAG00000007899) #30 MTF1 (ENSCLAG00000009885) #31 INPP5B (ENSCLAG00000009211) #32 SF3A3 (ENSCLAG00000010838) #33 FHL3 (ENSCLAG00000010530) #34 UTP11 (ENSCLAG00000012521) #35 RRAGC (ENSCLAG00000014225) #37 Guinea pig MODERN SPECIES 25 COL8A2 (ENSCPOG00000039740) TRAPPC3 (ENSCPOG00000038851) #7 MAP7D1 (ENSCPOG00000000559) #8 ENSCPOG00000037255 THRAP3 (ENSCPOG00000015742) #9 EVA1B (ENSCPOG00000020754) #11 STK40 (ENSCPOG00000027226) #12 LSM10 (ENSCPOG00000039302) #13 OSCP1 (ENSCPOG00000010874) #14 MRPS15 (ENSCPOG00000010877) #15 CSF3R (ENSCPOG00000010879) #16 GRIK3 (ENSCPOG00000025605) #17 ZC3H12A (ENSCPOG00000011081) #19 MEAF6 (ENSCPOG00000025988) #20 SNIP1 (ENSCPOG00000011083) #21 DNALI1 (ENSCPOG00000011086) #22 GNL2 (ENSCPOG00000026804) #23 RSPO1 (ENSCPOG00000038977) #24 C1orf109 (ENSCPOG00000001227) #25 CDCA8 (ENSCPOG00000001228) #26 ENSCPOG00000040734 #27 ENSCPOG00000004479 #27 Naked mole-rat female MODERN SPECIES 26 MAP7D1 (ENSHGLG00000014101) #8 THRAP3 (ENSHGLG00000019374) #9 ENSHGLG00000011928 #10 ENSHGLG00000035766 #11 STK40 (ENSHGLG00000010896) #12 ENSHGLG00000011625 #13 OSCP1 (ENSHGLG00000011822) #14 ENSHGLG00000047064 #15 ENSHGLG00000044262 CSF3R (ENSHGLG00000010743) #16 GRIK3 (ENSHGLG00000011776) #17 ENSHGLG00000046483 ZC3H12A (ENSHGLG00000012808) #19 MEAF6 (ENSHGLG00000013675) #20 SNIP1 (ENSHGLG00000045104) #21 DNALI1 (ENSHGLG00000012722) #22 GNL2 (ENSHGLG00000013728) #23 RSPO1 (ENSHGLG00000014006) #24 C1orf109 (ENSHGLG00000043434) #25 ENSHGLG00000012308 #26 ENSHGLG00000013051 #28 EPHA10 (ENSHGLG00000014075) #27 ENSHGLG00000014495 #30 MTF1 (ENSHGLG00000010430) #31 INPP5B (ENSHGLG00000011716) #32 SF3A3 (ENSHGLG00000012502) #33 FHL3 (ENSHGLG00000014086) #34 UTP11L (ENSHGLG00000037948) #35 POU3F1 (ENSHGLG00000034082) RRAGC (ENSHGLG00000016185) #37 MYCBP (ENSHGLG00000049839) Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Marmotini ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Alpin marmot MODERN SPECIES 15 COL8A2 (ENSMMMG00000007686) TRAPPC3 (ENSMMMG00000007674) #7 MAP7D1 (ENSMMMG00000006325) #8 THRAP3 (ENSMMMG00000006271) #9 SH3D21 (ENSMMMG00000006222) EVA1B (ENSMMMG00000006211) #11 STK40 (ENSMMMG00000006181) #12 LSM10 (ENSMMMG00000006179) #13 ENSMMMG00000006174 #14 MRPS15 (ENSMMMG00000006160) #15 CSF3R (ENSMMMG00000006145) #16 ENSMMMG00000006132 GRIK3 (ENSMMMG00000006114) #17 ZC3H12A (ENSMMMG00000006073) #19 SNIP1 (ENSMMMG00000006068) #21 DNALI1 (ENSMMMG00000006059) #22 GNL2 (ENSMMMG00000006031) #23 RSPO1 (ENSMMMG00000006021) #24 C1orf109 (ENSMMMG00000006007) #25 CDCA8 (ENSMMMG00000005956) #26 ENSMMMG00000005943 #27 ENSMMMG00000005932 #27 MANEAL (ENSMMMG00000005925) #28 YRDC (ENSMMMG00000005923) ENSMMMG00000005905 MTF1 (ENSMMMG00000005593) #31 INPP5B (ENSMMMG00000003529) #32 SF3A3 (ENSMMMG00000003437) #33 FHL3 (ENSMMMG00000003415) #34 UTP11 (ENSMMMG00000003393) #35 RRAGC (ENSMMMG00000003368) #37 Marmotini_b ANCESTRAL SPECIES ENSGT00940000154317.a.a ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752 #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 ENSGT00950000183031.A.a.a #37 Squirrel MODERN SPECIES 74 ADPRS (ENSSTOG00000010251) COL8A2 (ENSSTOG00000023344) TRAPPC3 (ENSSTOG00000010270) #7 MAP7D1 (ENSSTOG00000010274) #8 THRAP3 (ENSSTOG00000000602) #9 EVA1B (ENSSTOG00000023164) #11 STK40 (ENSSTOG00000027085) #12 LSM10 (ENSSTOG00000000606) #13 OSCP1 (ENSSTOG00000000607) #14 MRPS15 (ENSSTOG00000000608) #15 CSF3R (ENSSTOG00000000615) #16 GRIK3 (ENSSTOG00000010632) #17 ZC3H12A (ENSSTOG00000026842) #19 MEAF6 (ENSSTOG00000005166) #20 SNIP1 (ENSSTOG00000025511) #21 DNALI1 (ENSSTOG00000005196) #22 GNL2 (ENSSTOG00000005217) #23 RSPO1 (ENSSTOG00000005254) #24 C1orf109 (ENSSTOG00000000834) #25 CDCA8 (ENSSTOG00000000833) #26 ENSSTOG00000005714 #27 ENSSTOG00000031171 #27 MANEAL (ENSSTOG00000001640) #28 YRDC (ENSSTOG00000001643) C1orf122 (ENSSTOG00000024011) #30 MTF1 (ENSSTOG00000025276) #31 INPP5B (ENSSTOG00000001670) #32 SF3A3 (ENSSTOG00000001691) #33 FHL3 (ENSSTOG00000024538) #34 UTP11 (ENSSTOG00000022805) #35 RRAGC (ENSSTOG00000011043) #37 Arctic ground squirrel MODERN SPECIES 120 COL8A2 (ENSUPAG00010017659) TRAPPC3 (ENSUPAG00010017653) #7 MAP7D1 (ENSUPAG00010017568) #8 THRAP3 (ENSUPAG00010017531) #9 SH3D21 (ENSUPAG00010017516) EVA1B (ENSUPAG00010017508) #11 STK40 (ENSUPAG00010017491) #12 ENSUPAG00010017484 #13 OSCP1 (ENSUPAG00010017454) #14 MRPS15 (ENSUPAG00010017437) #15 CSF3R (ENSUPAG00010017417) #16 GRIK3 (ENSUPAG00010017396) #17 ZC3H12A (ENSUPAG00010017379) #19 MEAF6 (ENSUPAG00010017344) #20 SNIP1 (ENSUPAG00010017338) #21 DNALI1 (ENSUPAG00010017332) #22 ENSUPAG00010017290 RSPO1 (ENSUPAG00010017283) #24 C1orf109 (ENSUPAG00010017276) #25 CDCA8 (ENSUPAG00010017236) #26 ENSUPAG00010017225 #27 ENSUPAG00010017214 #27 MANEAL (ENSUPAG00010017206) #28 YRDC (ENSUPAG00010017183) C1orf122 (ENSUPAG00010017170) #30 MTF1 (ENSUPAG00010017110) #31 INPP5B (ENSUPAG00010016932) #32 SF3A3 (ENSUPAG00010016898) #33 FHL3 (ENSUPAG00010016892) #34 UTP11 (ENSUPAG00010016879) #35 POU3F1 (ENSUPAG00010016876) Eurasian red squirrel MODERN SPECIES TRAPPC3 (ENSSVLG00005002006) #7 MAP7D1 (ENSSVLG00005002056) #8 THRAP3 (ENSSVLG00005002113) #9 ENSSVLG00005002147 #10 ENSSVLG00005002157 EVA1B (ENSSVLG00005002184) #11 STK40 (ENSSVLG00005002214) #12 LSM10 (ENSSVLG00005002235) #13 OSCP1 (ENSSVLG00005002261) #14 MRPS15 (ENSSVLG00005002313) #15 CSF3R (ENSSVLG00005002340) #16 GRIK3 (ENSSVLG00005002397) #17 ZC3H12A (ENSSVLG00005002445) #19 MEAF6 (ENSSVLG00005002483) #20 SNIP1 (ENSSVLG00005002539) #21 DNALI1 (ENSSVLG00005002552) #22 GNL2 (ENSSVLG00005002574) #23 RSPO1 (ENSSVLG00005002610) #24 C1orf109 (ENSSVLG00005002644) #25 CDCA8 (ENSSVLG00005002670) #26 EPHA10 (ENSSVLG00005002692) #27 MANEAL (ENSSVLG00005002768) #28 YRDC (ENSSVLG00005002793) C1orf122 (ENSSVLG00005002816) #30 MTF1 (ENSSVLG00005002841) #31 ENSSVLG00005002913 #32 SF3A3 (ENSSVLG00005003142) #33 FHL3 (ENSSVLG00005003179) #34 UTP11 (ENSSVLG00005003193) #35 POU3F1 (ENSSVLG00005003210) ENSSVLG00005003228 #37 Lagomorpha ANCESTRAL SPECIES 36 ENSGT00390000003880.b.a #7 ENSGT00950000182941.a.a.b #8 ENSGT00950000183163.a.a #9 ENSGT00940000160627 ENSGT00940000168963 ENSGT00940000154096.b.b.b.b.a #11 ENSGT00950000182986.b #12 ENSGT00510000048364 #13 ENSGT00390000004808 #14 ENSGT00390000001737 #15 ENSGT00940000158915 #16 ENSGT00940000159465 #17 ENSGT00940000155107.a.a #19 ENSGT00390000015257 #20 ENSGT00940000156553 #21 ENSGT00390000003012 #22 ENSGT00810000125524 #23 ENSGT00940000158871 #24 ENSGT00390000008551 #25 ENSGT00390000011115 #26 ENSGT00940000160752.b #27 ENSGT00940000160752.a #27 ENSGT00390000016054.b #28 ENSGT00390000015364.b ENSGT00570000079623 #30 ENSGT00940000157291 #31 ENSGT00940000156762 #32 ENSGT00530000063402.a #33 ENSGT00950000183028.a.b #34 ENSGT00390000005813 #35 ENSGT00940000163458 Rabbit MODERN SPECIES 437 ADPRS (ENSOCUG00000011038) COL8A2 (ENSOCUG00000011042) TRAPPC3 (ENSOCUG00000011044) #7 MAP7D1 (ENSOCUG00000001551) #8 THRAP3 (ENSOCUG00000005323) #9 ENSOCUG00000003260 ENSOCUG00000002287 #11 STK40 (ENSOCUG00000005325) #12 OSCP1 (ENSOCUG00000005337) #14 MRPS15 (ENSOCUG00000005675) #15 CSF3R (ENSOCUG00000011231) #16 GRIK3 (ENSOCUG00000005581) #17 ZC3H12A (ENSOCUG00000010856) #19 MEAF6 (ENSOCUG00000010862) #20 SNIP1 (ENSOCUG00000010867) #21 DNALI1 (ENSOCUG00000010871) #22 GNL2 (ENSOCUG00000010877) #23 ENSOCUG00000010888 #24 ENSOCUG00000021550 #25 CDCA8 (ENSOCUG00000017043) #26 ENSOCUG00000030887 #27 ENSOCUG00000025671 #27 ENSOCUG00000037075 #27 MANEAL (ENSOCUG00000005375) #28 YRDC (ENSOCUG00000005384) C1orf122 (ENSOCUG00000008069) #30 MTF1 (ENSOCUG00000005389) #31 INPP5B (ENSOCUG00000005395) #32 SF3A3 (ENSOCUG00000005407) #33 FHL3 (ENSOCUG00000012459) #34 UTP11 (ENSOCUG00000007154) #35 Pika MODERN SPECIES 2813 SNIP1 (ENSOPRG00000002581) #21 DNALI1 (ENSOPRG00000002593) #22 GNL2 (ENSOPRG00000002625) #23 Tree shrew MODERN SPECIES 3157 DNALI1 (ENSTBEG00000002663) #22 GNL2 (ENSTBEG00000003443) #23 RSPO1 (ENSTBEG00000004539) #24 C1orf109 (ENSTBEG00000004732) #25 CDCA8 (ENSTBEG00000004883) #26 ENSTBEG00000005531 #27