Vertebrata ANCESTRAL SPECIES ENSGT00940000155104 #22 Gnathostomata ANCESTRAL SPECIES 24 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000156115 ENSGT00940000156139 ENSGT01000000214440.A.a.b.a ENSGT00940000155019.a.a ENSGT00940000157833 #34 ENSGT00530000063698.b #33 ENSGT00940000158264.b ENSGT00940000156213 #32 ENSGT00940000154347.b.b Euteleostomi ANCESTRAL SPECIES 76 ENSGT00410000025596.a.b #37 ENSGT00940000156761 #36 ENSGT00940000167209 ENSGT00940000160504 ENSGT00940000160992 ENSGT00940000165326 ENSGT00940000157034 ENSGT00940000155393.d ENSGT00940000157669 #35 ENSGT00940000155543 ENSGT00940000157582 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000156139 ENSGT01000000214440.A.a.b.a ENSGT00940000155019.a.a ENSGT00960000189438 ENSGT00940000157833 #34 ENSGT00530000063698.b #33 ENSGT00940000158264.b ENSGT00940000156213 #32 ENSGT00940000154347.b.b Sarcopterygii ANCESTRAL SPECIES 34 ENSGT00940000154164.d ENSGT00940000163807 ENSGT00950000182963.b.a ENSGT00940000158080 ENSGT00940000154748.C ENSGT00940000155463 ENSGT00390000007662 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00940000157218.C ENSGT00950000183053.A ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000154347.b.b ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000156139 ENSGT00940000167907 ENSGT00940000158264.b Tetrapoda ANCESTRAL SPECIES 38 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000154347.b.b ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 Amniota ANCESTRAL SPECIES 47 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000154347.b.b ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 Mammalia ANCESTRAL SPECIES 126 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 Theria ANCESTRAL SPECIES 16 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT01100000263839 Eutheria ANCESTRAL SPECIES ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT01100000263839 Boreoeutheria ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT01100000263839 Euarchontoglires ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Glires ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Rodentia ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Rodentia_A ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Sciuridae ANCESTRAL SPECIES 3 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.y.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Marmotini_b ANCESTRAL SPECIES ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00900000142807 #15 ENSGT00980000198702 #16 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.y.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Squirrel MODERN SPECIES 74 CCDC28B (ENSSTOG00000012044) #7 TXLNA (ENSSTOG00000019412) #8 KPNA6 (ENSSTOG00000012014) #9 TMEM39B (ENSSTOG00000012007) #10 KHDRBS1 (ENSSTOG00000014138) #11 PTP4A2 (ENSSTOG00000002775) #12 ENSSTOG00000001962 #13 ADGRB2 (ENSSTOG00000005617) #14 ENSSTOG00000005523 #15 ENSSTOG00000032249 #16 PEF1 (ENSSTOG00000026429) #17 HCRTR1 (ENSSTOG00000005508) #18 TINAGL1 (ENSSTOG00000024715) #19 ENSSTOG00000020547 #20 SERINC2 (ENSSTOG00000001504) #21 Fabp3 (ENSSTOG00000003842) #22 ZCCHC17 (ENSSTOG00000003825) #23 SNRNP40 (ENSSTOG00000003798) #24 NKAIN1 (ENSSTOG00000033908) #25 PUM1 (ENSSTOG00000010757) #26 SDC3 (ENSSTOG00000027125) #27 LAPTM5 (ENSSTOG00000021660) #28 MATN1 (ENSSTOG00000014709) #29 PTPRU (ENSSTOG00000015915) #30 MECR (ENSSTOG00000026575) #31 SRSF4 (ENSSTOG00000015908) #32 TMEM200B (ENSSTOG00000034064) #33 EPB41 (ENSSTOG00000032103) #34 OPRD1 (ENSSTOG00000011943) #35 YTHDF2 (ENSSTOG00000025075) #36 GMEB1 (ENSSTOG00000000088) #37 Arctic ground squirrel MODERN SPECIES 92 TMEM39B (ENSUPAG00010018807) #10 KHDRBS1 (ENSUPAG00010018830) #11 ENSUPAG00010018849 PTP4A2 (ENSUPAG00010018860) #12 ENSUPAG00010018876 #13 ADGRB2 (ENSUPAG00010018905) #14 COL16A1 (ENSUPAG00010019281) PEF1 (ENSUPAG00010019416) #17 HCRTR1 (ENSUPAG00010019430) #18 TINAGL1 (ENSUPAG00010019451) #19 ENSUPAG00010019492 #20 SERINC2 (ENSUPAG00010019553) #21 ENSUPAG00010019566 #22 ZCCHC17 (ENSUPAG00010019575) #23 SNRNP40 (ENSUPAG00010019580) #24 NKAIN1 (ENSUPAG00010019587) #25 PUM1 (ENSUPAG00010019620) #26 SDC3 (ENSUPAG00010019810) #27 LAPTM5 (ENSUPAG00010019820) #28 MATN1 (ENSUPAG00010019827) #29 PTPRU (ENSUPAG00010019842) #30 MECR (ENSUPAG00010019905) #31 SRSF4 (ENSUPAG00010019922) #32 TMEM200B (ENSUPAG00010019926) #33 EPB41 (ENSUPAG00010019935) #34 OPRD1 (ENSUPAG00010020681) #35 YTHDF2 (ENSUPAG00010020684) #36 GMEB1 (ENSUPAG00010020697) #37 Alpin marmot MODERN SPECIES 15 CCDC28B (ENSMMMG00000009026) #7 TXLNA (ENSMMMG00000009034) #8 KPNA6 (ENSMMMG00000009064) #9 TMEM39B (ENSMMMG00000009100) #10 KHDRBS1 (ENSMMMG00000009128) #11 PTP4A2 (ENSMMMG00000009225) #12 ENSMMMG00000009241 #13 ADGRB2 (ENSMMMG00000009281) #14 COL16A1 (ENSMMMG00000010975) ENSMMMG00000011120 #17 ENSMMMG00000011137 HCRTR1 (ENSMMMG00000011144) #18 TINAGL1 (ENSMMMG00000011199) #19 ENSMMMG00000011266 #20 SERINC2 (ENSMMMG00000011290) #21 ENSMMMG00000011348 #22 ZCCHC17 (ENSMMMG00000011356) #23 ENSMMMG00000011373 SNRNP40 (ENSMMMG00000011381) #24 NKAIN1 (ENSMMMG00000011409) #25 PUM1 (ENSMMMG00000011433) #26 SDC3 (ENSMMMG00000011746) #27 LAPTM5 (ENSMMMG00000011800) #28 PTPRU (ENSMMMG00000011811) #30 MECR (ENSMMMG00000011938) #31 SRSF4 (ENSMMMG00000011951) #32 TMEM200B (ENSMMMG00000011965) #33 EPB41 (ENSMMMG00000011984) #34 OPRD1 (ENSMMMG00000012823) #35 YTHDF2 (ENSMMMG00000012863) #36 GMEB1 (ENSMMMG00000012888) #37 Marmotini ANCESTRAL SPECIES ENSGT00940000155104.y.b ##22 Alpin marmot MODERN SPECIES 8 CFLAR (ENSMMMG00000012269) CASP10 (ENSMMMG00000012307) CASP8 (ENSMMMG00000012315) FLACC1 (ENSMMMG00000012333) TRAK2 (ENSMMMG00000012358) STRADB (ENSMMMG00000012410) ENSMMMG00000012437 TMEM237 (ENSMMMG00000012468) MPP4 (ENSMMMG00000012482) ENSMMMG00000012669 ALS2 (ENSMMMG00000012683) CDK15 (ENSMMMG00000012752) KIAA2012 (ENSMMMG00000012837) SUMO1 (ENSMMMG00000012871) NOP58 (ENSMMMG00000012922) ENSMMMG00000012982 ##22 ENSMMMG00000012991 BMPR2 (ENSMMMG00000012999) ENSMMMG00000013017 ENSMMMG00000013051 ENSMMMG00000013060 ICA1L (ENSMMMG00000013064) WDR12 (ENSMMMG00000013110) CARF (ENSMMMG00000013161) NBEAL1 (ENSMMMG00000013229) CYP20A1 (ENSMMMG00000013312) ABI2 (ENSMMMG00000013329) ENSMMMG00000013568 CD28 (ENSMMMG00000013599) CTLA4 (ENSMMMG00000013609) ICOS (ENSMMMG00000013624) Marmotini_b ANCESTRAL SPECIES ENSGT00940000155104.y.b ##22 Squirrel MODERN SPECIES 98 SPCS2 (ENSSTOG00000012647) XRRA1 (ENSSTOG00000000466) ENSSTOG00000034261 RNF169 (ENSSTOG00000000462) CHRDL2 (ENSSTOG00000000457) POLD3 (ENSSTOG00000000455) LIPT2 (ENSSTOG00000026720) KCNE3 (ENSSTOG00000012391) PGM2L1 (ENSSTOG00000012379) P4HA3 (ENSSTOG00000007908) PPME1 (ENSSTOG00000007881) C2CD3 (ENSSTOG00000004903) UCP3 (ENSSTOG00000004880) UCP2 (ENSSTOG00000010715) DNAJB13 (ENSSTOG00000010709) ENSSTOG00000031455 ##22 PAAF1 (ENSSTOG00000010701) COA4 (ENSSTOG00000010697) MRPL48 (ENSSTOG00000010694) ENSSTOG00000023497 PLEKHB1 (ENSSTOG00000022422) FAM168A (ENSSTOG00000014507) RELT (ENSSTOG00000014491) ARHGEF17 (ENSSTOG00000014476) P2RY6 (ENSSTOG00000024044) P2RY2 (ENSSTOG00000029054) FCHSD2 (ENSSTOG00000003831) ATG16L2 (ENSSTOG00000003790) STARD10 (ENSSTOG00000020779) ARAP1 (ENSSTOG00000014711) PDE2A (ENSSTOG00000004792) Marmotini ANCESTRAL SPECIES ENSGT00940000155104.z ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00940000155104.z ##22 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 317 CFLAR (ENSUPAG00010014940) CASP10 (ENSUPAG00010014765) CASP8 (ENSUPAG00010014705) FLACC1 (ENSUPAG00010014658) TRAK2 (ENSUPAG00010014606) STRADB (ENSUPAG00010014591) ENSUPAG00010014524 TMEM237 (ENSUPAG00010014479) MPP4 (ENSUPAG00010014266) ALS2 (ENSUPAG00010014184) CDK15 (ENSUPAG00010014153) FZD7 (ENSUPAG00010014150) KIAA2012 (ENSUPAG00010014115) SUMO1 (ENSUPAG00010014098) NOP58 (ENSUPAG00010014015) ENSUPAG00010014007 ##22 ENSUPAG00010014004 BMPR2 (ENSUPAG00010013984) FAM117B (ENSUPAG00010013968) ICA1L (ENSUPAG00010013914) WDR12 (ENSUPAG00010013907) CARF (ENSUPAG00010013873) NBEAL1 (ENSUPAG00010013702) Arctic ground squirrel MODERN SPECIES 680 ENSUPAG00010023095 LIPT2 (ENSUPAG00010023099) KCNE3 (ENSUPAG00010023101) PGM2L1 (ENSUPAG00010023103) ENSUPAG00010023111 P4HA3 (ENSUPAG00010023112) PPME1 (ENSUPAG00010023113) C2CD3 (ENSUPAG00010023114) UCP3 (ENSUPAG00010023118) UCP2 (ENSUPAG00010023121) DNAJB13 (ENSUPAG00010023122) ENSUPAG00010023124 ##22 PAAF1 (ENSUPAG00010023126) COA4 (ENSUPAG00010023131) ENSUPAG00010023132 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES ENSSVLG00005020761 CCDC28B (ENSSVLG00005020735) #7 TXLNA (ENSSVLG00005020708) #8 KPNA6 (ENSSVLG00005020665) #9 TMEM39B (ENSSVLG00005020611) #10 KHDRBS1 (ENSSVLG00005020568) #11 PTP4A2 (ENSSVLG00005020371) #12 ENSSVLG00005020176 #13 ADGRB2 (ENSSVLG00005019143) #14 COL16A1 (ENSSVLG00005018905) PEF1 (ENSSVLG00005018866) #17 HCRTR1 (ENSSVLG00005018697) #18 TINAGL1 (ENSSVLG00005018633) #19 ENSSVLG00005018517 #20 SERINC2 (ENSSVLG00005018336) #21 ENSSVLG00005018275 #22 ENSSVLG00005017969 #23 SNRNP40 (ENSSVLG00005017915) #24 NKAIN1 (ENSSVLG00005017873) #25 ENSSVLG00005017810 PUM1 (ENSSVLG00005017124) #26 SDC3 (ENSSVLG00005016980) #27 LAPTM5 (ENSSVLG00005016884) #28 MATN1 (ENSSVLG00005016798) #29 PTPRU (ENSSVLG00005016704) #30 MECR (ENSSVLG00005016630) #31 SRSF4 (ENSSVLG00005016599) #32 TMEM200B (ENSSVLG00005016580) #33 EPB41 (ENSSVLG00005014395) #34 OPRD1 (ENSSVLG00005012967) #35 ENSSVLG00005012949 Eurasian red squirrel MODERN SPECIES 3 ENSSVLG00005017780 ENSSVLG00005017761 ENSSVLG00005017706 ENSSVLG00005017467 ENSSVLG00005017010 FAM177B (ENSSVLG00005016899) DISP1 (ENSSVLG00005016863) TLR5 (ENSSVLG00005016843) ENSSVLG00005016801 SUSD4 (ENSSVLG00005016664) CCDC185 (ENSSVLG00005016646) CAPN8 (ENSSVLG00005016359) CAPN2 (ENSSVLG00005016131) TP53BP2 (ENSSVLG00005015950) FBXO28 (ENSSVLG00005015889) ENSSVLG00005015831 #22 ENSSVLG00005015789 DEGS1 (ENSSVLG00005015737) NVL (ENSSVLG00005014283) CNIH4 (ENSSVLG00005013000) WDR26 (ENSSVLG00005012677) CNIH3 (ENSSVLG00005012576) ENSSVLG00005012453 ENSSVLG00005012320 ENSSVLG00005012197 LBR (ENSSVLG00005012135) ENSSVLG00005011796 ENSSVLG00005011720 ENSSVLG00005011663 ENSSVLG00005011588 BOP1 (ENSSVLG00005011521) Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.t #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761.j #36 ENSGT00410000025596.a.b #37 Long-tailed chinchilla MODERN SPECIES 159 DCDC2B (ENSCLAG00000007816) IQCC (ENSCLAG00000008687) CCDC28B (ENSCLAG00000007795) #7 TXLNA (ENSCLAG00000011184) #8 KPNA6 (ENSCLAG00000014985) #9 TMEM39B (ENSCLAG00000015108) #10 KHDRBS1 (ENSCLAG00000015761) #11 PTP4A2 (ENSCLAG00000012319) #12 ADGRB2 (ENSCLAG00000008574) #14 COL16A1 (ENSCLAG00000009542) ENSCLAG00000013223 #15 PEF1 (ENSCLAG00000009480) #17 HCRTR1 (ENSCLAG00000015340) #18 TINAGL1 (ENSCLAG00000009256) #19 SERINC2 (ENSCLAG00000014936) #21 FABP3 (ENSCLAG00000009015) #22 ZCCHC17 (ENSCLAG00000008794) #23 SNRNP40 (ENSCLAG00000007507) #24 NKAIN1 (ENSCLAG00000007310) #25 PUM1 (ENSCLAG00000007662) #26 SDC3 (ENSCLAG00000010987) #27 LAPTM5 (ENSCLAG00000009573) #28 MATN1 (ENSCLAG00000008049) #29 PTPRU (ENSCLAG00000014778) #30 MECR (ENSCLAG00000010792) #31 ENSCLAG00000017721 SRSF4 (ENSCLAG00000009008) #32 EPB41 (ENSCLAG00000008568) #34 OPRD1 (ENSCLAG00000010788) #35 YTHDF2 (ENSCLAG00000007438) #36 GMEB1 (ENSCLAG00000006804) #37 Degu MODERN SPECIES 204 TXLNA (ENSODEG00000003515) #8 KPNA6 (ENSODEG00000003468) #9 TMEM39B (ENSODEG00000003418) #10 KHDRBS1 (ENSODEG00000003368) #11 ENSODEG00000003337 ENSODEG00000018961 ENSODEG00000004690 #12 ENSODEG00000004659 ENSODEG00000004641 #13 ADGRB2 (ENSODEG00000004337) #14 COL16A1 (ENSODEG00000004050) PEF1 (ENSODEG00000003947) #17 HCRTR1 (ENSODEG00000003919) #18 TINAGL1 (ENSODEG00000003816) #19 SERINC2 (ENSODEG00000003724) #21 FABP3 (ENSODEG00000003694) #22 ENSODEG00000003683 #23 SNRNP40 (ENSODEG00000003666) #24 NKAIN1 (ENSODEG00000003633) #25 ENSODEG00000003597 PUM1 (ENSODEG00000003465) #26 SDC3 (ENSODEG00000003364) #27 ENSODEG00000003328 LAPTM5 (ENSODEG00000003300) #28 MATN1 (ENSODEG00000003275) #29 PTPRU (ENSODEG00000003405) #30 MECR (ENSODEG00000003260) #31 SRSF4 (ENSODEG00000003230) #32 TMEM200B (ENSODEG00000003209) #33 ENSODEG00000003196 #34 ENSODEG00000003178 Guinea pig MODERN SPECIES 25 ENSCPOG00000034197 CCDC28B (ENSCPOG00000011980) #7 TXLNA (ENSCPOG00000011977) #8 KPNA6 (ENSCPOG00000011972) #9 TMEM39B (ENSCPOG00000006494) #10 KHDRBS1 (ENSCPOG00000024148) #11 ENSCPOG00000020765 #12 ENSCPOG00000007225 #13 ADGRB2 (ENSCPOG00000007198) #14 ENSCPOG00000007157 #15 COL16A1 (ENSCPOG00000040230) PEF1 (ENSCPOG00000007151) #17 HCRTR1 (ENSCPOG00000007144) #18 TINAGL1 (ENSCPOG00000022228) #19 SERINC2 (ENSCPOG00000004531) #21 FABP3 (ENSCPOG00000031850) #22 ENSCPOG00000000106 #23 SNRNP40 (ENSCPOG00000004486) #24 NKAIN1 (ENSCPOG00000005407) #25 PUM1 (ENSCPOG00000031613) #26 SDC3 (ENSCPOG00000022452) #27 LAPTM5 (ENSCPOG00000007128) #28 MATN1 (ENSCPOG00000010146) #29 ENSCPOG00000001380 PTPRU (ENSCPOG00000000424) #30 MECR (ENSCPOG00000037475) #31 SRSF4 (ENSCPOG00000036234) #32 TMEM200B (ENSCPOG00000020258) #33 EPB41 (ENSCPOG00000007254) #34 OPRD1 (ENSCPOG00000039511) #35 YTHDF2 (ENSCPOG00000019907) #36 Naked mole-rat female MODERN SPECIES 26 DCDC2B (ENSHGLG00000011118) ENSHGLG00000038406 CCDC28B (ENSHGLG00000012406) #7 TXLNA (ENSHGLG00000011869) #8 KPNA6 (ENSHGLG00000011028) #9 TMEM39B (ENSHGLG00000012355) #10 KHDRBS1 (ENSHGLG00000011935) #11 PTP4A2 (ENSHGLG00000037737) #12 SPOCD1 (ENSHGLG00000017620) #13 ADGRB2 (ENSHGLG00000019091) #14 COL16A1 (ENSHGLG00000012914) PEF1 (ENSHGLG00000043182) #17 HCRTR1 (ENSHGLG00000013949) #18 TINAGL1 (ENSHGLG00000012932) #19 SERINC2 (ENSHGLG00000011176) #21 FABP3 (ENSHGLG00000010081) #22 ENSHGLG00000019323 #23 ENSHGLG00000016092 #24 NKAIN1 (ENSHGLG00000036969) #25 Pum1 (ENSHGLG00000013819) #26 SDC3 (ENSHGLG00000033191) #27 LAPTM5 (ENSHGLG00000011268) #28 ENSHGLG00000018463 #29 ENSHGLG00000040884 ENSHGLG00000034685 ENSHGLG00000045877 ENSHGLG00000014761 #30 MECR (ENSHGLG00000012855) #31 SRSF4 (ENSHGLG00000011842) #32 TMEM200B (ENSHGLG00000049796) #33 EPB41 (ENSHGLG00000012118) #34 Rodentia_B ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Kangaroo rat MODERN SPECIES 370 Ccdc28b (ENSDORG00000029193) #7 Txlna (ENSDORG00000000197) #8 Kpna6 (ENSDORG00000007257) #9 Tmem39b (ENSDORG00000015092) #10 Khdrbs1 (ENSDORG00000011530) #11 Ptp4a2 (ENSDORG00000029587) ##12 ENSDORG00000014399 #13 Adgrb2 (ENSDORG00000014398) #14 ENSDORG00000026075 #15 ENSDORG00000014393 Pef1 (ENSDORG00000014391) #17 Hcrtr1 (ENSDORG00000014389) #18 Tinagl1 (ENSDORG00000014387) #19 Ldc1 (ENSDORG00000029290) #20 Serinc2 (ENSDORG00000001817) #21 Fabp3 (ENSDORG00000024318) #22 Zcchc17 (ENSDORG00000004128) #23 Snrnp40 (ENSDORG00000004126) #24 ENSDORG00000029852 Usp1 (ENSDORG00000008268) Dock7 (ENSDORG00000008269) Angptl3 (ENSDORG00000008279) Atg4c (ENSDORG00000027209) Alg6 (ENSDORG00000013729) Efcab7 (ENSDORG00000013731) Pgm1 (ENSDORG00000006501) Ror1 (ENSDORG00000014715) Cachd1 (ENSDORG00000011104) Raver2 (ENSDORG00000002498) Jak1 (ENSDORG00000013462) Ak4 (ENSDORG00000023966) Myomorpha ANCESTRAL SPECIES 3 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Muroidea ANCESTRAL SPECIES 3 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Upper Galilee mountains blind mole rat MODERN SPECIES 480 Dcdc2b (ENSNGAG00000012094) Iqcc (ENSNGAG00000016738) Ccdc28b (ENSNGAG00000013903) #7 Txlna (ENSNGAG00000005336) #8 Kpna6 (ENSNGAG00000019228) #9 Tmem39b (ENSNGAG00000003422) #10 Khdrbs1 (ENSNGAG00000021015) #11 ENSNGAG00000017009 ##12 ENSNGAG00000017658 #13 Adgrb2 (ENSNGAG00000015374) #14 Col16a1 (ENSNGAG00000018680) Pef1 (ENSNGAG00000020163) #17 Hcrtr1 (ENSNGAG00000021551) #18 Tinagl1 (ENSNGAG00000010974) #19 ENSNGAG00000021891 #21 Fabp3 (ENSNGAG00000022125) #22 Zcchc17 (ENSNGAG00000022689) #23 Snrnp40 (ENSNGAG00000023014) #24 Nkain1 (ENSNGAG00000010072) #25 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Cricetinae ANCESTRAL SPECIES 5 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Chinese hamster chok1gshd MODERN SPECIES 111 Iqcc (ENSCGRG00001015818) Ccdc28b (ENSCGRG00001015232) #7 Txlna (ENSCGRG00001000523) #8 Kpna6 (ENSCGRG00001024507) #9 Tmem39b (ENSCGRG00001017232) #10 Khdrbs1 (ENSCGRG00001018212) #11 Ptp4a2 (ENSCGRG00001017228) ##12 ENSCGRG00001015782 #13 Adgrb2 (ENSCGRG00001008451) #14 Col16a1 (ENSCGRG00001016090) Pef1 (ENSCGRG00001012610) #17 Hcrtr1 (ENSCGRG00001011434) #18 Tinagl1 (ENSCGRG00001024931) #19 ENSCGRG00001023178 #20 Serinc2 (ENSCGRG00001018501) #21 Fabp3 (ENSCGRG00001015716) #22 Zcchc17 (ENSCGRG00001014387) #23 Snrnp40 (ENSCGRG00001004488) #24 Nkain1 (ENSCGRG00001009372) #25 ENSCGRG00001012052 Pum1 (ENSCGRG00001024949) #26 Sdc3 (ENSCGRG00001023681) #27 Laptm5 (ENSCGRG00001021108) #28 Matn1 (ENSCGRG00001019479) #29 Ptpru (ENSCGRG00001023937) #30 Mecr (ENSCGRG00001024597) #31 Srsf4 (ENSCGRG00001021115) #32 Tmem200b (ENSCGRG00001010757) #33 Epb41 (ENSCGRG00001021983) #34 ENSCGRG00001024915 Oprd1 (ENSCGRG00001010255) #35 Golden Hamster MODERN SPECIES 709 Ccdc28b (ENSMAUG00000008126) #7 Txlna (ENSMAUG00000017494) #8 Kpna6 (ENSMAUG00000015502) #9 Tmem39b (ENSMAUG00000012747) #10 Khdrbs1 (ENSMAUG00000014931) #11 ENSMAUG00000021254 ##12 ENSMAUG00000014337 #13 Adgrb2 (ENSMAUG00000013391) #14 ENSMAUG00000019908 #15 ENSMAUG00000017808 #16 ENSMAUG00000016866 #17 Hcrtr1 (ENSMAUG00000011268) #18 Tinagl1 (ENSMAUG00000001156) #19 Ldc1 (ENSMAUG00000021361) #20 Serinc2 (ENSMAUG00000012888) #21 Fabp3 (ENSMAUG00000003807) #22 Zcchc17 (ENSMAUG00000005269) #23 Snrnp40 (ENSMAUG00000016062) #24 Nkain1 (ENSMAUG00000010811) #25 Pum1 (ENSMAUG00000022090) #26 Laptm5 (ENSMAUG00000013566) #28 Matn1 (ENSMAUG00000019156) #29 Ptpru (ENSMAUG00000016330) #30 Mecr (ENSMAUG00000021996) #31 Srsf4 (ENSMAUG00000021940) #32 Tmem200b (ENSMAUG00000021672) #33 ENSMAUG00000001636 #34 Oprd1 (ENSMAUG00000012704) #35 ENSMAUG00000010032 #36 Gmeb1 (ENSMAUG00000008912) #37 Taf12 (ENSMAUG00000019991) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Prairie vole MODERN SPECIES 1 Ccdc28b (ENSMOCG00000017821) #7 Txlna (ENSMOCG00000012537) #8 Kpna6 (ENSMOCG00000014850) #9 Tmem39b (ENSMOCG00000001707) #10 Khdrbs1 (ENSMOCG00000022233) #11 ENSMOCG00000011243 Ptp4a2 (ENSMOCG00000009816) ##12 ENSMOCG00000013559 #13 Adgrb2 (ENSMOCG00000000435) #14 Col16a1 (ENSMOCG00000009865) ENSMOCG00000016846 #17 Hcrtr1 (ENSMOCG00000015876) #18 Tinagl1 (ENSMOCG00000021429) #19 Ldc1 (ENSMOCG00000014529) #20 Serinc2 (ENSMOCG00000002463) #21 Fabp3 (ENSMOCG00000021759) #22 Zcchc17 (ENSMOCG00000014937) #23 Snrnp40 (ENSMOCG00000000680) #24 Nkain1 (ENSMOCG00000019951) #25 Pum1 (ENSMOCG00000015463) #26 Sdc3 (ENSMOCG00000020345) #27 Laptm5 (ENSMOCG00000014297) #28 Matn1 (ENSMOCG00000011816) #29 Ptpru (ENSMOCG00000019862) #30 Mecr (ENSMOCG00000017926) #31 Srsf4 (ENSMOCG00000013319) #32 Tmem200b (ENSMOCG00000014010) #33 Epb41 (ENSMOCG00000022373) #34 Oprd1 (ENSMOCG00000018388) #35 Ythdf2 (ENSMOCG00000018361) #36 Gmeb1 (ENSMOCG00000012332) #37 Northern American deer mouse DUPLICATION Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 21 Ebf1 (ENSPEMG00000022652) Clint1 (ENSPEMG00000022779) Lsm11 (ENSPEMG00000028614) Thg1l (ENSPEMG00000022707) Sox30 (ENSPEMG00000000554) Adam19 (ENSPEMG00000011893) Nipal4 (ENSPEMG00000030993) Cyfip2 (ENSPEMG00000013244) Fndc9 (ENSPEMG00000030039) Itk (ENSPEMG00000014168) Garin3 (ENSPEMG00000007819) Med7 (ENSPEMG00000019778) Havcr2 (ENSPEMG00000019286) ENSPEMG00000029530 ENSPEMG00000019712 ENSPEMG00000028909 #22 ENSPEMG00000025066 ENSPEMG00000024940 ENSPEMG00000030816 Timd4 (ENSPEMG00000012210) Sgcd (ENSPEMG00000011649) ENSPEMG00000027931 Rack1 (ENSPEMG00000011124) Trim41 (ENSPEMG00000017879) Trim7 (ENSPEMG00000012640) Irgm1 (ENSPEMG00000018645) ENSPEMG00000028500 ENSPEMG00000015679 ENSPEMG00000018053 ENSPEMG00000029540 Ifi47 (ENSPEMG00000017464) Northern American deer mouse MODERN SPECIES 389 ENSPEMG00000030321 #22 Northern American deer mouse MODERN SPECIES 11 Dcdc2b (ENSPEMG00000024085) Iqcc (ENSPEMG00000022559) Ccdc28b (ENSPEMG00000026808) #7 Txlna (ENSPEMG00000017204) #8 Kpna6 (ENSPEMG00000011504) #9 Tmem39b (ENSPEMG00000024093) #10 Khdrbs1 (ENSPEMG00000024209) #11 Ptp4a2 (ENSPEMG00000026135) ##12 Adgrb2 (ENSPEMG00000002482) #14 Col16a1 (ENSPEMG00000003734) Pef1 (ENSPEMG00000015241) #17 Hcrtr1 (ENSPEMG00000001404) #18 Tinagl1 (ENSPEMG00000009430) #19 Ldc1 (ENSPEMG00000018044) #20 Serinc2 (ENSPEMG00000005498) #21 ENSPEMG00000015403 #22 Zcchc17 (ENSPEMG00000015853) #23 Snrnp40 (ENSPEMG00000016783) #24 Nkain1 (ENSPEMG00000000116) #25 Pum1 (ENSPEMG00000010009) #26 Sdc3 (ENSPEMG00000015709) #27 Laptm5 (ENSPEMG00000016483) #28 Matn1 (ENSPEMG00000017513) #29 Ptpru (ENSPEMG00000010874) #30 Mecr (ENSPEMG00000009582) #31 Srsf4 (ENSPEMG00000003365) #32 Tmem200b (ENSPEMG00000012688) #33 Epb41 (ENSPEMG00000016438) #34 Oprd1 (ENSPEMG00000007805) #35 Ythdf2 (ENSPEMG00000014903) #36 Taf12 (ENSPEMG00000015879) Murinae ANCESTRAL SPECIES 2 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Mus ANCESTRAL SPECIES 3 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Mus_A ANCESTRAL SPECIES 3 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00860000135801 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Mus_B ANCESTRAL SPECIES 5 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00860000135801 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Mouse MODERN SPECIES 13 Iqcc (ENSMUSG00000040795) Ccdc28b (ENSMUSG00000028795) #7 Txlna (ENSMUSG00000053841) #8 Kpna6 (ENSMUSG00000003731) #9 Tmem39b (ENSMUSG00000053730) #10 Khdrbs1 (ENSMUSG00000028790) #11 Ptp4a2 (ENSMUSG00000028788) ##12 Spocd1 (ENSMUSG00000028784) #13 Adgrb2 (ENSMUSG00000028782) #14 Col16a1 (ENSMUSG00000040690) Pef1 (ENSMUSG00000028779) #17 Hcrtr1 (ENSMUSG00000028778) #18 Tinagl1 (ENSMUSG00000028776) #19 Ldc1 (ENSMUSG00000023120) #20 Serinc2 (ENSMUSG00000023232) #21 Fabp3 (ENSMUSG00000028773) #22 Zcchc17 (ENSMUSG00000028772) #23 Snrnp40 (ENSMUSG00000074088) #24 Nkain1 (ENSMUSG00000078532) #25 Pum1 (ENSMUSG00000028580) #26 Sdc3 (ENSMUSG00000025743) #27 Laptm5 (ENSMUSG00000028581) #28 Matn1 (ENSMUSG00000040533) #29 Ptpru (ENSMUSG00000028909) #30 Mecr (ENSMUSG00000028910) #31 Srsf4 (ENSMUSG00000028911) #32 Tmem200b (ENSMUSG00000070720) #33 Epb41 (ENSMUSG00000028906) #34 Oprd1 (ENSMUSG00000050511) #35 Ythdf2 (ENSMUSG00000040025) #36 Gmeb1 (ENSMUSG00000028901) #37 Mus_C ANCESTRAL SPECIES 2 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.s.b.b.c ##12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00860000135801 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00860000135912 ENSGT00940000157669 #35 ENSGT00940000156761 #36 spretus MODERN SPECIES 13 Ccdc28b (MGP_SPRETEiJ_G0027510) #7 Txlna (MGP_SPRETEiJ_G0027511) #8 Kpna6 (MGP_SPRETEiJ_G0027512) #9 Tmem39b (MGP_SPRETEiJ_G0027513) #10 Khdrbs1 (MGP_SPRETEiJ_G0027514) #11 Ptp4a2 (MGP_SPRETEiJ_G0027515) ##12 MGP_SPRETEiJ_G0027516 #13 Adgrb2 (MGP_SPRETEiJ_G0027517) #14 Col16a1 (MGP_SPRETEiJ_G0027518) Pef1 (MGP_SPRETEiJ_G0027519) #17 Hcrtr1 (MGP_SPRETEiJ_G0027520) #18 Tinagl1 (MGP_SPRETEiJ_G0027521) #19 Ldc1 (MGP_SPRETEiJ_G0027522) #20 Serinc2 (MGP_SPRETEiJ_G0027523) #21 MGP_SPRETEiJ_G0027524 Fabp3 (MGP_SPRETEiJ_G0027525) #22 Zcchc17 (MGP_SPRETEiJ_G0027526) #23 Snrnp40 (MGP_SPRETEiJ_G0027527) #24 Nkain1 (MGP_SPRETEiJ_G0027528) #25 Pum1 (MGP_SPRETEiJ_G0027529) #26 Sdc3 (MGP_SPRETEiJ_G0027530) #27 Laptm5 (MGP_SPRETEiJ_G0027531) #28 Matn1 (MGP_SPRETEiJ_G0027532) #29 Ptpru (MGP_SPRETEiJ_G0027533) #30 MGP_SPRETEiJ_G0027534 #31 Srsf4 (MGP_SPRETEiJ_G0027535) #32 Tmem200b (MGP_SPRETEiJ_G0027536) #33 Epb41 (MGP_SPRETEiJ_G0027537) #34 MGP_SPRETEiJ_G0027538 Oprd1 (MGP_SPRETEiJ_G0027539) #35 MGP_SPRETEiJ_G0027540 #36 Steppe mouse MODERN SPECIES 3021 Ldc1 (ENSMSIG00000031904) #20 Serinc2 (ENSMSIG00000031905) #21 Fabp3 (ENSMSIG00000031907) #22 Zcchc17 (ENSMSIG00000031908) #23 Snrnp40 (ENSMSIG00000031909) #24 Nkain1 (ENSMSIG00000031910) #25 Pum1 (ENSMSIG00000031911) #26 Sdc3 (ENSMSIG00000031914) #27 Laptm5 (ENSMSIG00000031916) #28 Matn1 (ENSMSIG00000031917) #29 ENSMSIG00000031920 Ptpru (ENSMSIG00000031924) #30 Mecr (ENSMSIG00000031925) #31 Srsf4 (ENSMSIG00000031926) #32 Ryukyu mouse MODERN SPECIES 13 Ccdc28b (MGP_CAROLIEiJ_G0026530) #7 MGP_CAROLIEiJ_G0026531 #8 Kpna6 (MGP_CAROLIEiJ_G0026532) #9 Tmem39b (MGP_CAROLIEiJ_G0026533) #10 Khdrbs1 (MGP_CAROLIEiJ_G0026534) #11 Ptp4a2 (MGP_CAROLIEiJ_G0026535) ##12 MGP_CAROLIEiJ_G0026536 #13 Adgrb2 (MGP_CAROLIEiJ_G0026537) #14 Col16a1 (MGP_CAROLIEiJ_G0026538) Pef1 (MGP_CAROLIEiJ_G0026539) #17 Hcrtr1 (MGP_CAROLIEiJ_G0026540) #18 Tinagl1 (MGP_CAROLIEiJ_G0026541) #19 MGP_CAROLIEiJ_G0026542 #20 Serinc2 (MGP_CAROLIEiJ_G0026543) #21 MGP_CAROLIEiJ_G0026544 Fabp3 (MGP_CAROLIEiJ_G0026545) #22 Zcchc17 (MGP_CAROLIEiJ_G0026546) #23 Snrnp40 (MGP_CAROLIEiJ_G0026547) #24 Nkain1 (MGP_CAROLIEiJ_G0026548) #25 Pum1 (MGP_CAROLIEiJ_G0026549) #26 Sdc3 (MGP_CAROLIEiJ_G0026550) #27 Laptm5 (MGP_CAROLIEiJ_G0026551) #28 Matn1 (MGP_CAROLIEiJ_G0026552) #29 Ptpru (MGP_CAROLIEiJ_G0026553) #30 Mecr (MGP_CAROLIEiJ_G0026554) #31 Srsf4 (MGP_CAROLIEiJ_G0026555) #32 Tmem200b (MGP_CAROLIEiJ_G0026556) #33 Epb41 (MGP_CAROLIEiJ_G0026557) #34 MGP_CAROLIEiJ_G0026558 Oprd1 (MGP_CAROLIEiJ_G0026559) #35 Gmeb1 (MGP_CAROLIEiJ_G0026561) #37 Shrew mouse MODERN SPECIES 19 Ccdc28b (MGP_PahariEiJ_G0028862) #7 MGP_PahariEiJ_G0028863 #8 Kpna6 (MGP_PahariEiJ_G0028864) #9 MGP_PahariEiJ_G0028865 #10 Khdrbs1 (MGP_PahariEiJ_G0028866) #11 Ptp4a2 (MGP_PahariEiJ_G0028867) ##12 MGP_PahariEiJ_G0028868 #13 Adgrb2 (MGP_PahariEiJ_G0028869) #14 Col16a1 (MGP_PahariEiJ_G0028870) Pef1 (MGP_PahariEiJ_G0028871) #17 Hcrtr1 (MGP_PahariEiJ_G0028872) #18 Tinagl1 (MGP_PahariEiJ_G0028873) #19 Ldc1 (MGP_PahariEiJ_G0028874) #20 Serinc2 (MGP_PahariEiJ_G0028875) #21 MGP_PahariEiJ_G0028876 Fabp3 (MGP_PahariEiJ_G0028877) #22 Zcchc17 (MGP_PahariEiJ_G0028878) #23 Snrnp40 (MGP_PahariEiJ_G0028879) #24 Nkain1 (MGP_PahariEiJ_G0028880) #25 Pum1 (MGP_PahariEiJ_G0028881) #26 Sdc3 (MGP_PahariEiJ_G0028882) #27 Laptm5 (MGP_PahariEiJ_G0028883) #28 Matn1 (MGP_PahariEiJ_G0028884) #29 Ptpru (MGP_PahariEiJ_G0028885) #30 Mecr (MGP_PahariEiJ_G0028886) #31 Srsf4 (MGP_PahariEiJ_G0028887) #32 Tmem200b (MGP_PahariEiJ_G0028888) #33 Epb41 (MGP_PahariEiJ_G0028889) #34 MGP_PahariEiJ_G0028890 Oprd1 (MGP_PahariEiJ_G0028891) #35 Ythdf2 (MGP_PahariEiJ_G0028892) #36 Rat DUPLICATION Rat MODERN SPECIES 15 Penk (ENSRNOG00000008943) Sdr16c6 (ENSRNOG00000067216) Sdr16c6 (ENSRNOG00000040151) Sdr16c5 (ENSRNOG00000008871) Chchd7 (ENSRNOG00000031769) Plag1 (ENSRNOG00000008846) LOC100364265 (ENSRNOG00000012088) Mos (ENSRNOG00000008567) Rps20-ps10 (ENSRNOG00000008555) Lyn (ENSRNOG00000008180) Tgs1 (ENSRNOG00000008156) Tmem68 (ENSRNOG00000008872) Xkr4 (ENSRNOG00000027276) Cyld-ps1 (ENSRNOG00000008861) Rp1 (ENSRNOG00000008807) ENSRNOG00000065942 #22 Sumo4 (ENSRNOG00000069967) Sox17 (ENSRNOG00000027357) Mrpl15 (ENSRNOG00000008566) Lypla1 (ENSRNOG00000008320) Tcea1 (ENSRNOG00000022323) Rgs20 (ENSRNOG00000008100) Atp6v1h (ENSRNOG00000030862) Oprk1 (ENSRNOG00000007647) Npbwr1 (ENSRNOG00000007640) Rb1cc1 (ENSRNOG00000006833) Alkal1 (ENSRNOG00000048703) St18 (ENSRNOG00000006200) AABR07046956.1 (ENSRNOG00000040219) Pcmtd1 (ENSRNOG00000005730) ENSRNOG00000064844 Rat MODERN SPECIES 15 Iqcc (ENSRNOG00000048553) Ccdc28b (ENSRNOG00000047578) #7 Txlna (ENSRNOG00000048242) #8 Kpna6 (ENSRNOG00000000127) #9 Tmem39b (ENSRNOG00000023746) #10 Khdrbs1 (ENSRNOG00000046794) #11 Ptp4a2 (ENSRNOG00000050044) ##12 ENSRNOG00000064683 #13 Adgrb2 (ENSRNOG00000014375) #14 Col16a1 (ENSRNOG00000031475) Pef1 (ENSRNOG00000013972) #17 Hcrtr1 (ENSRNOG00000013838) #18 Tinagl1 (ENSRNOG00000013179) #19 Ldc1 (ENSRNOG00000024788) #20 Serinc2 (ENSRNOG00000012989) #21 Fabp3 (ENSRNOG00000012879) #22 Zcchc17 (ENSRNOG00000012266) #23 Snrnp40 (ENSRNOG00000012219) #24 Nkain1 (ENSRNOG00000011445) #25 Pum1 (ENSRNOG00000011709) #26 Sdc3 (ENSRNOG00000011927) #27 Laptm5 (ENSRNOG00000011054) #28 Matn1 (ENSRNOG00000010932) #29 Ptpru (ENSRNOG00000013515) #30 Mecr (ENSRNOG00000028047) #31 Srsf4 (ENSRNOG00000010007) #32 Tmem200b (ENSRNOG00000065288) #33 Epb41 (ENSRNOG00000010037) #34 Oprd1 (ENSRNOG00000010531) #35 Ythdf2 (ENSRNOG00000010892) #36 Gmeb1 (ENSRNOG00000010910) #37 Lagomorpha ANCESTRAL SPECIES 21 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Pika MODERN SPECIES 10054 FABP3 (ENSOPRG00000002661) #22 Rabbit MODERN SPECIES 4 NBL1 (ENSOCUG00000008065) MICOS10 (ENSOCUG00000030087) CAPZB (ENSOCUG00000014711) SLC66A1 (ENSOCUG00000027668) AKR7L (ENSOCUG00000000153) ENSOCUG00000029709 ENSOCUG00000014622 MRTO4 (ENSOCUG00000000274) EMC1 (ENSOCUG00000000272) UBR4 (ENSOCUG00000000264) IFFO2 (ENSOCUG00000021074) ALDH4A1 (ENSOCUG00000015315) TAS1R2 (ENSOCUG00000010652) PAX7 (ENSOCUG00000006146) IGSF21 (ENSOCUG00000022332) FABP3 (ENSOCUG00000014608) #22 ENSOCUG00000014599 #23 SNRNP40 (ENSOCUG00000014588) #24 ENSOCUG00000004783 #25 PUM1 (ENSOCUG00000008641) #26 SDC3 (ENSOCUG00000006838) #27 MATN1 (ENSOCUG00000008153) #29 PTPRU (ENSOCUG00000012661) #30 MECR (ENSOCUG00000012645) #31 SRSF4 (ENSOCUG00000001837) #32 TMEM200B (ENSOCUG00000025757) #33 EPB41 (ENSOCUG00000006641) #34 ENSOCUG00000030120 OPRD1 (ENSOCUG00000001033) #35 YTHDF2 (ENSOCUG00000010612) #36 GMEB1 (ENSOCUG00000010893) #37 Tree shrew MODERN SPECIES 2167 FABP3 (ENSTBEG00000009632) #22 ZCCHC17 (ENSTBEG00000009625) #23 SNRNP40 (ENSTBEG00000009621) #24 Primates ANCESTRAL SPECIES 4 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00910000147199 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00910000147199 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Tarsier MODERN SPECIES 4040 FABP3 (ENSTSYG00000000492) #22 ZCCHC17 (ENSTSYG00000000490) #23 SNRNP40 (ENSTSYG00000010363) #24 NKAIN1 (ENSTSYG00000030800) #25 Simiiformes ANCESTRAL SPECIES 3 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.u #12 ENSGT01090000263471 ENSGT00940000154383.v.a.b #12 ENSGT00910000147199 ENSGT00940000154383.v.a.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000169281 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Platyrrhini ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b.g.a #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00390000012430.d ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000169281 ENSGT00940000155058.c #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Mas night monkey MODERN SPECIES 1281 TMEM39B (ENSANAG00000023084) #10 KHDRBS1 (ENSANAG00000026939) #11 ENSANAG00000026331 ENSANAG00000025612 PTP4A2 (ENSANAG00000030836) #12 SPOCD1 (ENSANAG00000031653) #13 ADGRB2 (ENSANAG00000029461) #14 COL16A1 (ENSANAG00000024652) ENSANAG00000032316 #17 HCRTR1 (ENSANAG00000025201) #18 TINAGL1 (ENSANAG00000025062) #19 ENSANAG00000024434 SERINC2 (ENSANAG00000026109) #21 FABP3 (ENSANAG00000023651) #22 ZCCHC17 (ENSANAG00000024208) #23 ENSANAG00000021594 SNRNP40 (ENSANAG00000024470) #24 NKAIN1 (ENSANAG00000021249) #25 ENSANAG00000021771 PUM1 (ENSANAG00000027865) #26 SDC3 (ENSANAG00000024425) #27 LAPTM5 (ENSANAG00000020926) #28 MATN1 (ENSANAG00000001841) #29 PTPRU (ENSANAG00000021332) #30 MECR (ENSANAG00000022014) #31 SRSF4 (ENSANAG00000037134) #32 TMEM200B (ENSANAG00000021732) #33 EPB41 (ENSANAG00000020638) #34 OPRD1 (ENSANAG00000036570) #35 Cebidae DUPLICATION Cebidae DUPLICATION Cebidae ANCESTRAL SPECIES ENSGT00940000155104.`b.a #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155104.`b.a #22 Capuchin MODERN SPECIES 31 ENSCCAG00000001577 ENSCCAG00000024189 ENSCCAG00000035629 CNGA3 (ENSCCAG00000036994) INPP4A (ENSCCAG00000032743) COA5 (ENSCCAG00000031470) UNC50 (ENSCCAG00000028599) MGAT4A (ENSCCAG00000025882) CRACDL (ENSCCAG00000029992) C2orf15 (ENSCCAG00000027023) TSGA10 (ENSCCAG00000029564) LIPT1 (ENSCCAG00000018953) MITD1 (ENSCCAG00000031759) RASSF2 (ENSCCAG00000034388) SLC23A2 (ENSCCAG00000027857) ENSCCAG00000019801 #22 ENSCCAG00000028801 PCNA (ENSCCAG00000037224) CDS2 (ENSCCAG00000026795) ENSCCAG00000032595 PROKR2 (ENSCCAG00000037325) ENSCCAG00000030115 ENSCCAG00000023107 ENSCCAG00000030617 GPCPD1 (ENSCCAG00000025356) SHLD1 (ENSCCAG00000029838) CHGB (ENSCCAG00000026987) TRMT6 (ENSCCAG00000026939) MCM8 (ENSCCAG00000026974) CRLS1 (ENSCCAG00000037351) LRRN4 (ENSCCAG00000030748) Marmoset MODERN SPECIES 19 CCDC28B (ENSCJAG00000006747) #7 TXLNA (ENSCJAG00000006728) #8 KPNA6 (ENSCJAG00000006669) #9 TMEM39B (ENSCJAG00000006630) #10 ENSCJAG00000076153 ENSCJAG00000006580 #11 PTP4A2 (ENSCJAG00000044384) #12 ENSCJAG00000006536 #13 ADGRB2 (ENSCJAG00000006434) #14 COL16A1 (ENSCJAG00000006371) ENSCJAG00000006355 #17 HCRTR1 (ENSCJAG00000006342) #18 TINAGL1 (ENSCJAG00000006317) #19 ENSCJAG00000075483 SERINC2 (ENSCJAG00000006312) #21 ENSCJAG00000067643 #22 ENSCJAG00000065200 ENSCJAG00000006259 #23 ENSCJAG00000006212 #24 NKAIN1 (ENSCJAG00000038268) #25 ENSCJAG00000075386 PUM1 (ENSCJAG00000006035) #26 ENSCJAG00000073130 SDC3 (ENSCJAG00000085360) #27 LAPTM5 (ENSCJAG00000062185) #28 MATN1 (ENSCJAG00000005964) #29 PTPRU (ENSCJAG00000010031) #30 MECR (ENSCJAG00000009994) #31 SRSF4 (ENSCJAG00000047192) #32 EPB41 (ENSCJAG00000009831) #34 OPRD1 (ENSCJAG00000009824) #35 Cebidae ANCESTRAL SPECIES ENSGT00940000155104.`b.b #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155104.`b.b #22 Capuchin MODERN SPECIES 51 CCDC28B (ENSCCAG00000022531) #7 TXLNA (ENSCCAG00000034796) #8 ENSCCAG00000034188 #9 TMEM39B (ENSCCAG00000030953) #10 KHDRBS1 (ENSCCAG00000034524) #11 ENSCCAG00000015641 ENSCCAG00000035514 #12 SPOCD1 (ENSCCAG00000035023) #13 ADGRB2 (ENSCCAG00000024219) #14 COL16A1 (ENSCCAG00000034225) PEF1 (ENSCCAG00000034817) #17 HCRTR1 (ENSCCAG00000034394) #18 TINAGL1 (ENSCCAG00000035538) #19 ENSCCAG00000028620 SERINC2 (ENSCCAG00000022777) #21 FABP3 (ENSCCAG00000037665) #22 ZCCHC17 (ENSCCAG00000033666) #23 SNRNP40 (ENSCCAG00000030763) #24 NKAIN1 (ENSCCAG00000033899) #25 ENSCCAG00000003174 ENSCCAG00000032489 ENSCCAG00000029909 #26 TMOD1 (ENSCCAG00000032163) TSTD2 (ENSCCAG00000036487) NCBP1 (ENSCCAG00000032297) XPA (ENSCCAG00000033822) FOXE1 (ENSCCAG00000019725) TRMO (ENSCCAG00000031902) HEMGN (ENSCCAG00000032925) ANP32B (ENSCCAG00000003754) NANS (ENSCCAG00000025455) Cebidae ANCESTRAL SPECIES 1 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b.g.a #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00390000012430.d ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.ab #22 ENSGT00510000047363 #23 ENSGT00940000155058.c #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Cebidae_a ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b.g.a #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00390000012430.d ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.ab #22 ENSGT00510000047363 #23 ENSGT00940000155058.c #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Capuchin MODERN SPECIES 96 LACC1 (ENSCCAG00000036612) CCDC122 (ENSCCAG00000031193) ENOX1 (ENSCCAG00000033756) DNAJC15 (ENSCCAG00000032014) EPSTI1 (ENSCCAG00000028457) FAM216B (ENSCCAG00000020670) TNFSF11 (ENSCCAG00000021412) ENSCCAG00000031208 ENSCCAG00000031576 #22 AKAP11 (ENSCCAG00000021435) DGKH (ENSCCAG00000033754) ERBB3 (ENSCCAG00000034488) ENSCCAG00000030569 ENSCCAG00000038067 ENSCCAG00000027265 ENSCCAG00000020214 ESYT1 (ENSCCAG00000037028) ENSCCAG00000028306 MYL6 (ENSCCAG00000034648) SMARCC2 (ENSCCAG00000023462) ENSCCAG00000029583 NABP2 (ENSCCAG00000030372) SLC39A5 (ENSCCAG00000037965) ANKRD52 (ENSCCAG00000020543) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 106 KCTD4 (ENSSBOG00000019746) ENSSBOG00000021983 NUFIP1 (ENSSBOG00000028111) TSC22D1 (ENSSBOG00000021407) SERP2 (ENSSBOG00000023986) SMIM2 (ENSSBOG00000025045) LACC1 (ENSSBOG00000032664) CCDC122 (ENSSBOG00000024643) ENOX1 (ENSSBOG00000035177) DNAJC15 (ENSSBOG00000033169) EPSTI1 (ENSSBOG00000034834) ENSSBOG00000031675 FAM216B (ENSSBOG00000028998) TNFSF11 (ENSSBOG00000027654) ENSSBOG00000033805 ENSSBOG00000024102 #22 AKAP11 (ENSSBOG00000013175) DGKH (ENSSBOG00000019023) VWA8 (ENSSBOG00000031026) ENSSBOG00000016579 RGCC (ENSSBOG00000034616) NAA16 (ENSSBOG00000030176) MTRF1 (ENSSBOG00000004572) ENSSBOG00000025048 KBTBD7 (ENSSBOG00000011075) KBTBD6 (ENSSBOG00000008935) WBP4 (ENSSBOG00000026978) ELF1 (ENSSBOG00000024356) ENSSBOG00000024617 SLC25A15 (ENSSBOG00000003370) MRPS31 (ENSSBOG00000034159) Bolivian squirrel monkey MODERN SPECIES 135 IQCC (ENSSBOG00000028040) CCDC28B (ENSSBOG00000025914) #7 TXLNA (ENSSBOG00000035001) #8 KPNA6 (ENSSBOG00000026463) #9 TMEM39B (ENSSBOG00000029137) #10 KHDRBS1 (ENSSBOG00000031548) #11 ENSSBOG00000022787 ENSSBOG00000030499 #12 SPOCD1 (ENSSBOG00000028069) #13 ADGRB2 (ENSSBOG00000032588) #14 COL16A1 (ENSSBOG00000031855) ENSSBOG00000035586 #17 HCRTR1 (ENSSBOG00000036269) #18 TINAGL1 (ENSSBOG00000036278) #19 SERINC2 (ENSSBOG00000029623) #21 FABP3 (ENSSBOG00000024843) #22 ZCCHC17 (ENSSBOG00000029249) #23 SNRNP40 (ENSSBOG00000019987) #24 NKAIN1 (ENSSBOG00000000522) #25 PUM1 (ENSSBOG00000032037) #26 ENSSBOG00000021400 SDC3 (ENSSBOG00000034809) #27 LAPTM5 (ENSSBOG00000036012) #28 MATN1 (ENSSBOG00000025737) #29 PTPRU (ENSSBOG00000032299) #30 MECR (ENSSBOG00000035605) #31 SRSF4 (ENSSBOG00000027098) #32 EPB41 (ENSSBOG00000034516) #34 OPRD1 (ENSSBOG00000018704) #35 ENSSBOG00000028922 YTHDF2 (ENSSBOG00000034045) #36 Catarrhini ANCESTRAL SPECIES 3 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.u #12 ENSGT01090000263471 ENSGT00940000154383.v.a.b #12 ENSGT00940000154383.v.a.a #12 ENSGT00910000147199 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.f #24 ENSGT00940000169281 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Cercopithecinae ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b.c #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Vervet Monkey MODERN SPECIES 12 TMEM234 (ENSCSAG00000001049) IQCC (ENSCSAG00000001048) CCDC28B (ENSCSAG00000001047) #7 TXLNA (ENSCSAG00000001046) #8 KPNA6 (ENSCSAG00000001045) #9 TMEM39B (ENSCSAG00000001044) #10 KHDRBS1 (ENSCSAG00000001043) #11 ENSCSAG00000001042 #12 SPOCD1 (ENSCSAG00000001041) #13 ADGRB2 (ENSCSAG00000001040) #14 ENSCSAG00000001039 PEF1 (ENSCSAG00000001038) #17 HCRTR1 (ENSCSAG00000001037) #18 TINAGL1 (ENSCSAG00000001036) #19 SERINC2 (ENSCSAG00000001035) #21 FABP3 (ENSCSAG00000001033) #22 ZCCHC17 (ENSCSAG00000001032) #23 SNRNP40 (ENSCSAG00000001031) #24 NKAIN1 (ENSCSAG00000001030) #25 ENSCSAG00000001029 PUM1 (ENSCSAG00000001028) #26 SDC3 (ENSCSAG00000001027) #27 LAPTM5 (ENSCSAG00000001026) #28 MATN1 (ENSCSAG00000001025) #29 PTPRU (ENSCSAG00000001024) #30 MECR (ENSCSAG00000001023) #31 SRSF4 (ENSCSAG00000001022) #32 TMEM200B (ENSCSAG00000000655) #33 EPB41 (ENSCSAG00000001021) #34 OPRD1 (ENSCSAG00000001020) #35 ENSCSAG00000001019 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b.c #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000164617 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b.c #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000164617 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Olive baboon MODERN SPECIES CCDC28B (ENSPANG00000015080) #7 TXLNA (ENSPANG00000020220) #8 KPNA6 (ENSPANG00000007649) #9 TMEM39B (ENSPANG00000016297) #10 KHDRBS1 (ENSPANG00000023230) #11 ENSPANG00000040456 PTP4A2 (ENSPANG00000008254) #12 SPOCD1 (ENSPANG00000017826) #13 ADGRB2 (ENSPANG00000005575) #14 COL16A1 (ENSPANG00000025216) ENSPANG00000005576 #17 HCRTR1 (ENSPANG00000019532) #18 ENSPANG00000002587 TINAGL1 (ENSPANG00000017800) #19 ENSPANG00000021935 #20 FABP3 (ENSPANG00000000127) #22 ZCCHC17 (ENSPANG00000016167) #23 SNRNP40 (ENSPANG00000017889) #24 NKAIN1 (ENSPANG00000037021) #25 ENSPANG00000043235 ENSPANG00000036631 ENSPANG00000038636 ENSPANG00000046354 PUM1 (ENSPANG00000016338) #26 SDC3 (ENSPANG00000008025) #27 LAPTM5 (ENSPANG00000016018) #28 MATN1 (ENSPANG00000016577) #29 ENSPANG00000038388 PTPRU (ENSPANG00000011555) #30 MECR (ENSPANG00000007687) #31 SRSF4 (ENSPANG00000021937) #32 Cercopithecinae_d ANCESTRAL SPECIES 1 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b.c #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Sooty mangabey MODERN SPECIES 227 IQCC (ENSCATG00000033168) CCDC28B (ENSCATG00000033193) #7 TXLNA (ENSCATG00000043679) #8 KPNA6 (ENSCATG00000035399) #9 TMEM39B (ENSCATG00000033795) #10 KHDRBS1 (ENSCATG00000044448) #11 PTP4A2 (ENSCATG00000029937) #12 SPOCD1 (ENSCATG00000044230) #13 ADGRB2 (ENSCATG00000036238) #14 COL16A1 (ENSCATG00000044173) ENSCATG00000043554 #17 HCRTR1 (ENSCATG00000044141) #18 TINAGL1 (ENSCATG00000044434) #19 SERINC2 (ENSCATG00000044118) #21 ENSCATG00000020444 FABP3 (ENSCATG00000043604) #22 ZCCHC17 (ENSCATG00000044586) #23 SNRNP40 (ENSCATG00000027459) #24 NKAIN1 (ENSCATG00000033203) #25 PUM1 (ENSCATG00000017991) #26 SDC3 (ENSCATG00000043852) #27 LAPTM5 (ENSCATG00000043956) #28 MATN1 (ENSCATG00000044560) #29 PTPRU (ENSCATG00000036995) #30 MECR (ENSCATG00000043979) #31 SRSF4 (ENSCATG00000031440) #32 TMEM200B (ENSCATG00000005039) #33 EPB41 (ENSCATG00000028944) #34 ENSCATG00000006297 OPRD1 (ENSCATG00000027331) #35 YTHDF2 (ENSCATG00000044332) #36 Drill DUPLICATION Drill MODERN SPECIES 465 GTF2F2 (ENSMLEG00000014777) KCTD4 (ENSMLEG00000023023) ENSMLEG00000038702 NUFIP1 (ENSMLEG00000027383) ENSMLEG00000031148 TSC22D1 (ENSMLEG00000033850) SERP2 (ENSMLEG00000028135) SMIM2 (ENSMLEG00000044402) LACC1 (ENSMLEG00000035433) CCDC122 (ENSMLEG00000034489) ENOX1 (ENSMLEG00000027764) DNAJC15 (ENSMLEG00000035648) EPSTI1 (ENSMLEG00000042839) FAM216B (ENSMLEG00000029691) TNFSF11 (ENSMLEG00000043519) ENSMLEG00000036105 #22 AKAP11 (ENSMLEG00000042723) DGKH (ENSMLEG00000018820) ENSMLEG00000030444 Drill MODERN SPECIES 426 CCDC28B (ENSMLEG00000035364) #7 TXLNA (ENSMLEG00000035260) #8 KPNA6 (ENSMLEG00000043272) #9 TMEM39B (ENSMLEG00000042460) #10 KHDRBS1 (ENSMLEG00000032825) #11 ENSMLEG00000038580 #12 SPOCD1 (ENSMLEG00000016232) #13 ADGRB2 (ENSMLEG00000036379) #14 COL16A1 (ENSMLEG00000033357) ENSMLEG00000027504 #17 HCRTR1 (ENSMLEG00000039071) #18 ENSMLEG00000027924 TINAGL1 (ENSMLEG00000038929) #19 ENSMLEG00000040265 SERINC2 (ENSMLEG00000036834) #21 FABP3 (ENSMLEG00000035716) #22 ZCCHC17 (ENSMLEG00000040817) #23 ENSMLEG00000027010 SNRNP40 (ENSMLEG00000035197) #24 NKAIN1 (ENSMLEG00000044395) #25 PUM1 (ENSMLEG00000038743) #26 SDC3 (ENSMLEG00000032383) #27 LAPTM5 (ENSMLEG00000034084) #28 MATN1 (ENSMLEG00000042029) #29 Macaca ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b.c #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b.d.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000164617 ENSGT00940000160023 #19 ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00390000010721.a.a.b ENSGT00940000157669 #35 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 180 KCTD4 (ENSMNEG00000025133) GPALPP1 (ENSMNEG00000033610) NUFIP1 (ENSMNEG00000033299) ENSMNEG00000004676 ENSMNEG00000035585 TSC22D1 (ENSMNEG00000000209) SERP2 (ENSMNEG00000042638) SMIM2 (ENSMNEG00000042675) LACC1 (ENSMNEG00000045105) CCDC122 (ENSMNEG00000039888) ENOX1 (ENSMNEG00000040967) DNAJC15 (ENSMNEG00000039087) EPSTI1 (ENSMNEG00000027227) FAM216B (ENSMNEG00000040597) TNFSF11 (ENSMNEG00000031662) ENSMNEG00000036293 #22 AKAP11 (ENSMNEG00000045160) DGKH (ENSMNEG00000038131) VWA8 (ENSMNEG00000039926) RGCC (ENSMNEG00000036862) NAA16 (ENSMNEG00000036159) MTRF1 (ENSMNEG00000035487) KBTBD7 (ENSMNEG00000018279) KBTBD6 (ENSMNEG00000038336) WBP4 (ENSMNEG00000039992) ELF1 (ENSMNEG00000044466) SLC25A15 (ENSMNEG00000042783) MRPS31 (ENSMNEG00000031161) ENSMNEG00000030680 FOXO1 (ENSMNEG00000031472) COG6 (ENSMNEG00000042440) Pig-tailed macaque MODERN SPECIES 217 CCDC28B (ENSMNEG00000041534) #7 TXLNA (ENSMNEG00000042689) #8 KPNA6 (ENSMNEG00000044554) #9 TMEM39B (ENSMNEG00000020570) #10 KHDRBS1 (ENSMNEG00000035607) #11 PTP4A2 (ENSMNEG00000030559) #12 SPOCD1 (ENSMNEG00000028459) #13 ADGRB2 (ENSMNEG00000033277) #14 COL16A1 (ENSMNEG00000030754) PEF1 (ENSMNEG00000039313) #17 HCRTR1 (ENSMNEG00000042588) #18 ENSMNEG00000014998 TINAGL1 (ENSMNEG00000013230) #19 ENSMNEG00000033066 SERINC2 (ENSMNEG00000034138) #21 FABP3 (ENSMNEG00000028162) #22 ZCCHC17 (ENSMNEG00000032021) #23 ENSMNEG00000030407 SNRNP40 (ENSMNEG00000033437) #24 NKAIN1 (ENSMNEG00000041535) #25 PUM1 (ENSMNEG00000034639) #26 SDC3 (ENSMNEG00000030268) #27 LAPTM5 (ENSMNEG00000012765) #28 MATN1 (ENSMNEG00000031564) #29 PTPRU (ENSMNEG00000044104) #30 MECR (ENSMNEG00000042809) #31 SRSF4 (ENSMNEG00000034931) #32 TMEM200B (ENSMNEG00000025032) #33 EPB41 (ENSMNEG00000029961) #34 ENSMNEG00000002799 OPRD1 (ENSMNEG00000039650) #35 Macaca_a ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.v.a.b.c #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b.d.a #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000164617 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00910000147267 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.b.a.b.a.b.a.b.a.a.a ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00390000010721.a.a.b Crab-eating macaque MODERN SPECIES CCDC28B (ENSMFAG00000031708) #7 TXLNA (ENSMFAG00000041015) #8 KPNA6 (ENSMFAG00000000429) #9 TMEM39B (ENSMFAG00000036558) #10 KHDRBS1 (ENSMFAG00000001194) #11 PTP4A2 (ENSMFAG00000038041) #12 SPOCD1 (ENSMFAG00000030849) #13 ADGRB2 (ENSMFAG00000028460) #14 COL16A1 (ENSMFAG00000042878) PEF1 (ENSMFAG00000030472) #17 HCRTR1 (ENSMFAG00000044224) #18 ENSMFAG00000033663 TINAGL1 (ENSMFAG00000001721) #19 SERINC2 (ENSMFAG00000042146) #21 ZCCHC17 (ENSMFAG00000039045) #23 FABP3 (ENSMFAG00000031211) #22 SNRNP40 (ENSMFAG00000031418) #24 NKAIN1 (ENSMFAG00000036574) #25 PUM1 (ENSMFAG00000010291) #26 ENSMFAG00000051031 SDC3 (ENSMFAG00000045826) #27 LAPTM5 (ENSMFAG00000022085) #28 MATN1 (ENSMFAG00000031992) #29 ENSMFAG00000044095 ENSMFAG00000063061 PTPRU (ENSMFAG00000001608) #30 MECR (ENSMFAG00000000155) #31 SRSF4 (ENSMFAG00000041784) #32 TMEM200B (ENSMFAG00000038738) #33 ENSMFAG00000062308 EPB41 (ENSMFAG00000046344) #34 Rhesus MODERN SPECIES CCDC28B (ENSMMUG00000015066) #7 TXLNA (ENSMMUG00000015580) #8 KPNA6 (ENSMMUG00000008455) #9 TMEM39B (ENSMMUG00000015650) #10 KHDRBS1 (ENSMMUG00000023438) #11 PTP4A2 (ENSMMUG00000046901) #12 SPOCD1 (ENSMMUG00000005466) #13 ADGRB2 (ENSMMUG00000023401) #14 COL16A1 (ENSMMUG00000023398) ENSMMUG00000023397 #17 HCRTR1 (ENSMMUG00000023396) #18 ENSMMUG00000023395 SERINC2 (ENSMMUG00000013188) #19 ENSMMUG00000049574 #20 ZCCHC17 (ENSMMUG00000012156) #23 FABP3 (ENSMMUG00000064353) #22 SNRNP40 (ENSMMUG00000019406) #24 NKAIN1 (ENSMMUG00000019884) #25 PUM1 (ENSMMUG00000013520) #26 ENSMMUG00000063979 SDC3 (ENSMMUG00000013519) #27 LAPTM5 (ENSMMUG00000008744) #28 MATN1 (ENSMMUG00000054963) #29 ENSMMUG00000051737 ENSMMUG00000057173 PTPRU (ENSMMUG00000015661) #30 MECR (ENSMMUG00000015659) #31 SRSF4 (ENSMMUG00000007110) #32 TMEM200B (ENSMMUG00000011378) #33 EPB41 (ENSMMUG00000011377) #34 YTHDF2 (ENSMMUG00000011391) #36 Rhinopithecus ANCESTRAL SPECIES 156 ENSGT00940000159552 ENSGT00390000012569.b ENSGT00390000003758 ENSGT00390000003628.b.c.b.a.a.a ENSGT00940000159144.B ENSGT00940000163647 ENSGT00940000162467.b ENSGT00390000014262 ENSGT00390000000693 ENSGT00390000005130 ENSGT00390000006788.a.b ENSGT00940000159907 ENSGT00390000013820 ENSGT00940000154512.a ENSGT01070000253816.a.a.b ENSGT00940000155104 #22 ENSGT00510000047363 #23 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 1507 ENSRBIG00000028379 MAGEL2 (ENSRBIG00000007801) NDN (ENSRBIG00000009280) TNFSF11 (ENSRBIG00000036386) ENSRBIG00000037894 #22 AKAP11 (ENSRBIG00000036023) DGKH (ENSRBIG00000030309) VWA8 (ENSRBIG00000034278) RGCC (ENSRBIG00000031991) NAA16 (ENSRBIG00000037675) ENSRBIG00000026954 ENSRBIG00000043748 MTRF1 (ENSRBIG00000007069) ENSRBIG00000030206 ENSRBIG00000035054 KBTBD6 (ENSRBIG00000037297) WBP4 (ENSRBIG00000041962) ELF1 (ENSRBIG00000028865) ENSRBIG00000000771 SLC25A15 (ENSRBIG00000037546) Black snub-nosed monkey MODERN SPECIES 1873 DCDC2B (ENSRBIG00000039126) IQCC (ENSRBIG00000027307) CCDC28B (ENSRBIG00000022149) #7 TXLNA (ENSRBIG00000044142) #8 KPNA6 (ENSRBIG00000036564) #9 TMEM39B (ENSRBIG00000026786) #10 KHDRBS1 (ENSRBIG00000028373) #11 ENSRBIG00000044763 #12 SPOCD1 (ENSRBIG00000035234) #13 ADGRB2 (ENSRBIG00000039470) #14 COL16A1 (ENSRBIG00000031525) PEF1 (ENSRBIG00000044431) #17 HCRTR1 (ENSRBIG00000029068) #18 TINAGL1 (ENSRBIG00000037828) #19 SERINC2 (ENSRBIG00000035929) #21 FABP3 (ENSRBIG00000007191) #22 ZCCHC17 (ENSRBIG00000033939) #23 ENSRBIG00000007354 SNRNP40 (ENSRBIG00000027853) #24 NKAIN1 (ENSRBIG00000037899) #25 PUM1 (ENSRBIG00000042521) #26 SDC3 (ENSRBIG00000029710) #27 LAPTM5 (ENSRBIG00000036618) #28 MATN1 (ENSRBIG00000043616) #29 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1793 ENSRROG00000034426 FAM216B (ENSRROG00000003798) TNFSF11 (ENSRROG00000028662) ENSRROG00000025518 #22 AKAP11 (ENSRROG00000030390) DGKH (ENSRROG00000030004) VWA8 (ENSRROG00000043191) RGCC (ENSRROG00000029679) NAA16 (ENSRROG00000031116) ENSRROG00000024797 ENSRROG00000015827 MTRF1 (ENSRROG00000035345) KBTBD7 (ENSRROG00000028641) ENSRROG00000037292 KBTBD6 (ENSRROG00000026268) WBP4 (ENSRROG00000044405) ELF1 (ENSRROG00000037511) ENSRROG00000043031 SLC25A15 (ENSRROG00000041123) Golden snub-nosed monkey MODERN SPECIES 783 DCDC2B (ENSRROG00000031886) IQCC (ENSRROG00000029490) CCDC28B (ENSRROG00000027591) #7 TXLNA (ENSRROG00000004597) #8 KPNA6 (ENSRROG00000045186) #9 TMEM39B (ENSRROG00000043561) #10 KHDRBS1 (ENSRROG00000043518) #11 ENSRROG00000030559 #12 SPOCD1 (ENSRROG00000044215) #13 ADGRB2 (ENSRROG00000038153) #14 COL16A1 (ENSRROG00000041136) PEF1 (ENSRROG00000042803) #17 HCRTR1 (ENSRROG00000031014) #18 TINAGL1 (ENSRROG00000029462) #19 SERINC2 (ENSRROG00000045551) #21 FABP3 (ENSRROG00000042992) #22 ZCCHC17 (ENSRROG00000028866) #23 ENSRROG00000042063 SNRNP40 (ENSRROG00000028537) #24 NKAIN1 (ENSRROG00000038223) #25 ENSRROG00000005322 PUM1 (ENSRROG00000020156) #26 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000167695.b ENSGT00940000154383.v.a.b #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000158302.d.b ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000169281 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Gibbon MODERN SPECIES 2 ENSNLEG00000002386 #7 TXLNA (ENSNLEG00000002301) #8 KPNA6 (ENSNLEG00000026894) #9 TMEM39B (ENSNLEG00000002175) #10 ENSNLEG00000002148 #11 ENSNLEG00000018196 PTP4A2 (ENSNLEG00000002137) #12 SPOCD1 (ENSNLEG00000002098) #13 ADGRB2 (ENSNLEG00000002059) #14 ENSNLEG00000036165 PEF1 (ENSNLEG00000001979) #17 HCRTR1 (ENSNLEG00000001953) #18 TINAGL1 (ENSNLEG00000001808) #19 ENSNLEG00000018195 SERINC2 (ENSNLEG00000001605) #21 FABP3 (ENSNLEG00000035320) #22 ZCCHC17 (ENSNLEG00000001493) #23 ENSNLEG00000034052 SNRNP40 (ENSNLEG00000034156) #24 NKAIN1 (ENSNLEG00000001297) #25 ENSNLEG00000032088 ENSNLEG00000032957 PUM1 (ENSNLEG00000001151) #26 SDC3 (ENSNLEG00000001148) #27 LAPTM5 (ENSNLEG00000032538) #28 MATN1 (ENSNLEG00000001107) #29 Hominidae ANCESTRAL SPECIES 3 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000167695.b ENSGT00940000154383.v.a.b #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00550000076338 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000169281 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000167695.b ENSGT00940000154383.v.a.b #12 ENSGT00910000147199.b ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000169281 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Gorilla MODERN SPECIES TXLNA (ENSGGOG00000001571) #8 KPNA6 (ENSGGOG00000004016) #9 TMEM39B (ENSGGOG00000008638) #10 KHDRBS1 (ENSGGOG00000008633) #11 ENSGGOG00000043990 PTP4A2 (ENSGGOG00000013057) #12 ENSGGOG00000038353 SPOCD1 (ENSGGOG00000016748) #13 ADGRB2 (ENSGGOG00000016616) #14 COL16A1 (ENSGGOG00000015740) PEF1 (ENSGGOG00000015897) #17 HCRTR1 (ENSGGOG00000015894) #18 TINAGL1 (ENSGGOG00000015888) #19 ENSGGOG00000027763 SERINC2 (ENSGGOG00000008227) #21 FABP3 (ENSGGOG00000014432) #22 ZCCHC17 (ENSGGOG00000009126) #23 ENSGGOG00000037147 SNRNP40 (ENSGGOG00000001034) #24 NKAIN1 (ENSGGOG00000009189) #25 ENSGGOG00000041055 PUM1 (ENSGGOG00000011983) #26 SDC3 (ENSGGOG00000027183) #27 LAPTM5 (ENSGGOG00000017026) #28 MATN1 (ENSGGOG00000007826) #29 PTPRU (ENSGGOG00000006305) #30 ENSGGOG00000003122 #31 SRSF4 (ENSGGOG00000002444) #32 TMEM200B (ENSGGOG00000036267) #33 EPB41 (ENSGGOG00000004272) #34 OPRD1 (ENSGGOG00000002157) #35 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000167695.b ENSGT00940000154383.v.a.b #12 ENSGT00910000147199.b ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Human MODERN SPECIES IQCC (ENSG00000160051) CCDC28B (ENSG00000160050) #7 TXLNA (ENSG00000084652) #8 KPNA6 (ENSG00000025800) #9 TMEM39B (ENSG00000121775) #10 KHDRBS1 (ENSG00000121774) #11 ENSG00000288678 PTP4A2 (ENSG00000184007) #12 SPOCD1 (ENSG00000134668) #13 ADGRB2 (ENSG00000121753) #14 COL16A1 (ENSG00000084636) PEF1 (ENSG00000162517) #17 HCRTR1 (ENSG00000121764) #18 TINAGL1 (ENSG00000142910) #19 SERINC2 (ENSG00000168528) #21 FABP3 (ENSG00000121769) #22 ZCCHC17 (ENSG00000121766) #23 SNRNP40 (ENSG00000060688) #24 NKAIN1 (ENSG00000084628) #25 PUM1 (ENSG00000134644) #26 SDC3 (ENSG00000162512) #27 LAPTM5 (ENSG00000162511) #28 MATN1 (ENSG00000162510) #29 ENSG00000289710 PTPRU (ENSG00000060656) #30 MECR (ENSG00000116353) #31 SRSF4 (ENSG00000116350) #32 TMEM200B (ENSG00000253304) #33 EPB41 (ENSG00000159023) #34 OPRD1 (ENSG00000116329) #35 YTHDF2 (ENSG00000198492) #36 Pan ANCESTRAL SPECIES ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000167695.b ENSGT00940000154383.v.a.b #12 ENSGT00910000147199.b ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.m.b #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058.e.a #24 ENSGT00940000159949 #25 ENSGT00940000161069.e.a ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 4 KCTD4 (ENSPTRG00000047173) GTF2F2 (ENSPTRG00000005840) GPALPP1 (ENSPTRG00000024388) NUFIP1 (ENSPTRG00000005838) ENSPTRG00000048209 TSC22D1 (ENSPTRG00000005837) SERP2 (ENSPTRG00000049445) SMIM2 (ENSPTRG00000045031) LACC1 (ENSPTRG00000005834) CCDC122 (ENSPTRG00000005833) ENOX1 (ENSPTRG00000005832) DNAJC15 (ENSPTRG00000047723) EPSTI1 (ENSPTRG00000045006) FAM216B (ENSPTRG00000050984) TNFSF11 (ENSPTRG00000005827) ENSPTRG00000050423 #22 AKAP11 (ENSPTRG00000005824) ENSPTRG00000042691 DGKH (ENSPTRG00000005823) VWA8 (ENSPTRG00000005820) RGCC (ENSPTRG00000005819) ENSPTRG00000048809 NAA16 (ENSPTRG00000005816) MTRF1 (ENSPTRG00000005815) KBTBD7 (ENSPTRG00000045760) ENSPTRG00000050292 KBTBD6 (ENSPTRG00000044355) WBP4 (ENSPTRG00000005812) ELF1 (ENSPTRG00000005811) SLC25A15 (ENSPTRG00000044827) MRPS31 (ENSPTRG00000005808) Chimpanzee MODERN SPECIES TXLNA (ENSPTRG00000000472) #8 KPNA6 (ENSPTRG00000000471) #9 TMEM39B (ENSPTRG00000000470) #10 KHDRBS1 (ENSPTRG00000000469) #11 ENSPTRG00000052338 PTP4A2 (ENSPTRG00000047405) #12 ENSPTRG00000047303 SPOCD1 (ENSPTRG00000000466) #13 ADGRB2 (ENSPTRG00000000465) #14 COL16A1 (ENSPTRG00000000464) PEF1 (ENSPTRG00000000463) #17 HCRTR1 (ENSPTRG00000000462) #18 TINAGL1 (ENSPTRG00000000461) #19 ENSPTRG00000048355 SERINC2 (ENSPTRG00000000458) #21 FABP3 (ENSPTRG00000000457) #22 ZCCHC17 (ENSPTRG00000000456) #23 SNRNP40 (ENSPTRG00000000455) #24 ENSPTRG00000051686 NKAIN1 (ENSPTRG00000000454) #25 ENSPTRG00000034023 PUM1 (ENSPTRG00000000453) #26 SDC3 (ENSPTRG00000000451) #27 LAPTM5 (ENSPTRG00000000450) #28 MATN1 (ENSPTRG00000000449) #29 PTPRU (ENSPTRG00000000447) #30 MECR (ENSPTRG00000000446) #31 SRSF4 (ENSPTRG00000000445) #32 TMEM200B (ENSPTRG00000000444) #33 EPB41 (ENSPTRG00000000442) #34 OPRD1 (ENSPTRG00000000440) #35 Bonobo DUPLICATION Bonobo MODERN SPECIES 317 ENOX1 (ENSPPAG00000026244) DNAJC15 (ENSPPAG00000023934) EPSTI1 (ENSPPAG00000020892) FAM216B (ENSPPAG00000000821) TNFSF11 (ENSPPAG00000034988) ENSPPAG00000034821 #22 AKAP11 (ENSPPAG00000034496) DGKH (ENSPPAG00000026670) Bonobo MODERN SPECIES ENSPPAG00000033019 #7 TXLNA (ENSPPAG00000003695) #8 KPNA6 (ENSPPAG00000017972) #9 TMEM39B (ENSPPAG00000031146) #10 KHDRBS1 (ENSPPAG00000035456) #11 ENSPPAG00000018477 PTP4A2 (ENSPPAG00000032126) #12 ENSPPAG00000010696 #13 ADGRB2 (ENSPPAG00000031666) #14 ENSPPAG00000035093 PEF1 (ENSPPAG00000035001) #17 HCRTR1 (ENSPPAG00000029321) #18 TINAGL1 (ENSPPAG00000036194) #19 ENSPPAG00000015380 SERINC2 (ENSPPAG00000003963) #21 FABP3 (ENSPPAG00000029757) #22 ZCCHC17 (ENSPPAG00000030937) #23 SNRNP40 (ENSPPAG00000017296) #24 ENSPPAG00000042046 NKAIN1 (ENSPPAG00000022775) #25 ENSPPAG00000041563 PUM1 (ENSPPAG00000044003) #26 SDC3 (ENSPPAG00000032002) #27 LAPTM5 (ENSPPAG00000030829) #28 MATN1 (ENSPPAG00000003456) #29 ENSPPAG00000022035 PTPRU (ENSPPAG00000001262) #30 MECR (ENSPPAG00000038550) #31 SRSF4 (ENSPPAG00000028357) #32 EPB41 (ENSPPAG00000038163) #34 OPRD1 (ENSPPAG00000041756) #35 Orangutan DUPLICATION Orangutan MODERN SPECIES 4 ENSPPYG00000005335 KCTD4 (ENSPPYG00000005334) GTF2F2 (ENSPPYG00000005333) GPALPP1 (ENSPPYG00000005332) NUFIP1 (ENSPPYG00000005331) TSC22D1 (ENSPPYG00000005330) SERP2 (ENSPPYG00000014205) SMIM2 (ENSPPYG00000005328) LACC1 (ENSPPYG00000005327) CCDC122 (ENSPPYG00000005326) ENOX1 (ENSPPYG00000005324) DNAJC15 (ENSPPYG00000005323) ENSPPYG00000005322 FAM216B (ENSPPYG00000005321) TNFSF11 (ENSPPYG00000005320) ENSPPYG00000034024 #22 AKAP11 (ENSPPYG00000005319) DGKH (ENSPPYG00000005318) VWA8 (ENSPPYG00000005317) RGCC (ENSPPYG00000005316) NAA16 (ENSPPYG00000005314) MTRF1 (ENSPPYG00000005313) KBTBD7 (ENSPPYG00000032922) KBTBD6 (ENSPPYG00000037658) WBP4 (ENSPPYG00000005310) ELF1 (ENSPPYG00000005309) SLC25A15 (ENSPPYG00000005307) MRPS31 (ENSPPYG00000005306) FOXO1 (ENSPPYG00000005304) ENSPPYG00000005302 COG6 (ENSPPYG00000005301) Orangutan MODERN SPECIES TXLNA (ENSPPYG00000001602) #8 KPNA6 (ENSPPYG00000001603) #9 TMEM39B (ENSPPYG00000001604) #10 KHDRBS1 (ENSPPYG00000001605) #11 PTP4A2 (ENSPPYG00000001606) #12 ENSPPYG00000001607 SPOCD1 (ENSPPYG00000001608) #13 ADGRB2 (ENSPPYG00000001609) #14 COL16A1 (ENSPPYG00000001610) PEF1 (ENSPPYG00000001611) #17 HCRTR1 (ENSPPYG00000001612) #18 TINAGL1 (ENSPPYG00000001613) #19 ENSPPYG00000034280 SERINC2 (ENSPPYG00000001615) #21 ENSPPYG00000001614 FABP3 (ENSPPYG00000038558) #22 ZCCHC17 (ENSPPYG00000001617) #23 SNRNP40 (ENSPPYG00000001618) #24 NKAIN1 (ENSPPYG00000001619) #25 PUM1 (ENSPPYG00000001621) #26 SDC3 (ENSPPYG00000001623) #27 LAPTM5 (ENSPPYG00000001624) #28 MATN1 (ENSPPYG00000001625) #29 PTPRU (ENSPPYG00000001627) #30 ENSPPYG00000041302 ENSPPYG00000001628 #31 SRSF4 (ENSPPYG00000001629) #32 TMEM200B (ENSPPYG00000001630) #33 EPB41 (ENSPPYG00000001631) #34 OPRD1 (ENSPPYG00000001633) #35 YTHDF2 (ENSPPYG00000001634) #36 Strepsirrhini ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00910000147199 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Bushbaby MODERN SPECIES 299 ENSOGAG00000004583 #10 KHDRBS1 (ENSOGAG00000004582) #11 ENSOGAG00000026969 PTP4A2 (ENSOGAG00000029603) #12 SPOCD1 (ENSOGAG00000016702) #13 ADGRB2 (ENSOGAG00000006787) #14 COL16A1 (ENSOGAG00000004599) PEF1 (ENSOGAG00000004597) #17 HCRTR1 (ENSOGAG00000004595) #18 TINAGL1 (ENSOGAG00000004594) #19 SERINC2 (ENSOGAG00000013759) #21 PGAM1 (ENSOGAG00000027180) FABP3 (ENSOGAG00000013757) #22 ZCCHC17 (ENSOGAG00000013749) #23 ENSOGAG00000004538 #24 NKAIN1 (ENSOGAG00000004537) #25 PUM1 (ENSOGAG00000011063) #26 SDC3 (ENSOGAG00000031276) #27 ENSOGAG00000033118 LAPTM5 (ENSOGAG00000014958) #28 MATN1 (ENSOGAG00000014950) #29 PTPRU (ENSOGAG00000015523) #30 MECR (ENSOGAG00000015520) #31 SRSF4 (ENSOGAG00000015515) #32 TMEM200B (ENSOGAG00000025912) #33 EPB41 (ENSOGAG00000001603) #34 ENSOGAG00000025718 OPRD1 (ENSOGAG00000025601) #35 Lemuriformes ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00910000147199 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Lemuriformes_a ANCESTRAL SPECIES 58 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00910000147199 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 Greater bamboo lemur MODERN SPECIES 1298 PTP4A2 (ENSPSMG00000002248) #12 ENSPSMG00000002141 SPOCD1 (ENSPSMG00000002126) #13 ADGRB2 (ENSPSMG00000001920) #14 COL16A1 (ENSPSMG00000001723) PEF1 (ENSPSMG00000001687) #17 HCRTR1 (ENSPSMG00000001664) #18 TINAGL1 (ENSPSMG00000001632) #19 SERINC2 (ENSPSMG00000001571) #21 FABP3 (ENSPSMG00000001498) #22 ZCCHC17 (ENSPSMG00000001472) #23 SNRNP40 (ENSPSMG00000001390) #24 NKAIN1 (ENSPSMG00000001353) #25 Coquerels sifaka MODERN SPECIES 257 DCDC2B (ENSPCOG00000014846) IQCC (ENSPCOG00000018338) CCDC28B (ENSPCOG00000020784) #7 TXLNA (ENSPCOG00000023840) #8 KPNA6 (ENSPCOG00000002597) #9 TMEM39B (ENSPCOG00000013093) #10 ENSPCOG00000019588 #11 PTP4A2 (ENSPCOG00000014261) #12 SPOCD1 (ENSPCOG00000023602) #13 ADGRB2 (ENSPCOG00000020386) #14 COL16A1 (ENSPCOG00000018868) PEF1 (ENSPCOG00000023703) #17 HCRTR1 (ENSPCOG00000000086) #18 TINAGL1 (ENSPCOG00000022206) #19 SERINC2 (ENSPCOG00000017242) #21 FABP3 (ENSPCOG00000014637) #22 ZCCHC17 (ENSPCOG00000024007) #23 SNRNP40 (ENSPCOG00000019627) #24 NKAIN1 (ENSPCOG00000025478) #25 PUM1 (ENSPCOG00000004398) #26 SDC3 (ENSPCOG00000021485) #27 LAPTM5 (ENSPCOG00000017689) #28 MATN1 (ENSPCOG00000022136) #29 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 11 TMEM234 (ENSMICG00000017799) DCDC2B (ENSMICG00000017798) CCDC28B (ENSMICG00000017797) #7 TXLNA (ENSMICG00000043957) #8 KPNA6 (ENSMICG00000001434) #9 TMEM39B (ENSMICG00000001430) #10 KHDRBS1 (ENSMICG00000001428) #11 PTP4A2 (ENSMICG00000001424) #12 SPOCD1 (ENSMICG00000001411) #13 ADGRB2 (ENSMICG00000001400) #14 COL16A1 (ENSMICG00000001377) PEF1 (ENSMICG00000001374) #17 HCRTR1 (ENSMICG00000001367) #18 TINAGL1 (ENSMICG00000001362) #19 SERINC2 (ENSMICG00000009364) #21 ENSMICG00000009359 #22 ENSMICG00000009354 #23 GUCA2B (ENSMICG00000011582) GUCA2A (ENSMICG00000010437) FOXJ3 (ENSMICG00000010441) RIMKLA (ENSMICG00000014895) ZMYND12 (ENSMICG00000043809) PPCS (ENSMICG00000014936) CCDC30 (ENSMICG00000014950) PPIH (ENSMICG00000014971) ENSMICG00000014984 ENSMICG00000033725 CLDN19 (ENSMICG00000029190) P3H1 (ENSMICG00000015012) C1orf50 (ENSMICG00000015041) TMEM269 (ENSMICG00000044647) Mouse lemur MODERN SPECIES 7 MRPL38 (ENSMICG00000045774) FBF1 (ENSMICG00000007674) ACOX1 (ENSMICG00000033103) TEN1 (ENSMICG00000042402) CDK3 (ENSMICG00000045151) EVPL (ENSMICG00000007705) SRP68 (ENSMICG00000007726) GALR2 (ENSMICG00000038284) ZACN (ENSMICG00000007743) EXOC7 (ENSMICG00000007750) FOXJ1 (ENSMICG00000030811) RNF157 (ENSMICG00000013253) UBALD2 (ENSMICG00000034419) ENSMICG00000013287 PRPSAP1 (ENSMICG00000013330) ENSMICG00000036750 #22 SPHK1 (ENSMICG00000013341) UBE2O (ENSMICG00000013365) AANAT (ENSMICG00000047145) RHBDF2 (ENSMICG00000013408) CYGB (ENSMICG00000013429) ENSMICG00000037981 PRCD (ENSMICG00000046674) ENSMICG00000033881 ST6GALNAC2 (ENSMICG00000007518) ST6GALNAC1 (ENSMICG00000030490) ENSMICG00000032525 JMJD6 (ENSMICG00000016945) METTL23 (ENSMICG00000016953) SRSF2 (ENSMICG00000016956) MFSD11 (ENSMICG00000016959) Laurasiatheria ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT01100000263839 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Carnivora ANCESTRAL SPECIES 1 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Caniformia ANCESTRAL SPECIES 2 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Mustelinae ANCESTRAL SPECIES ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Ferret MODERN SPECIES 167 IQCC (ENSMPUG00000015298) CCDC28B (ENSMPUG00000015300) #7 TXLNA (ENSMPUG00000015304) #8 KPNA6 (ENSMPUG00000015306) #9 TMEM39B (ENSMPUG00000015352) #10 KHDRBS1 (ENSMPUG00000015353) #11 ENSMPUG00000015354 PTP4A2 (ENSMPUG00000015355) #12 SPOCD1 (ENSMPUG00000015359) #13 ADGRB2 (ENSMPUG00000015362) #14 COL16A1 (ENSMPUG00000015420) PEF1 (ENSMPUG00000015427) #17 HCRTR1 (ENSMPUG00000015430) #18 TINAGL1 (ENSMPUG00000015431) #19 SERINC2 (ENSMPUG00000015434) #21 FABP3 (ENSMPUG00000015436) #22 ZCCHC17 (ENSMPUG00000015442) #23 SNRNP40 (ENSMPUG00000015451) #24 NKAIN1 (ENSMPUG00000015453) #25 PUM1 (ENSMPUG00000015454) #26 SDC3 (ENSMPUG00000015458) #27 LAPTM5 (ENSMPUG00000015459) #28 MATN1 (ENSMPUG00000015461) #29 ENSMPUG00000015464 PTPRU (ENSMPUG00000015467) #30 MECR (ENSMPUG00000015468) #31 SRSF4 (ENSMPUG00000015470) #32 EPB41 (ENSMPUG00000015472) #34 OPRD1 (ENSMPUG00000015498) #35 ENSMPUG00000015500 YTHDF2 (ENSMPUG00000015501) #36 American mink MODERN SPECIES 9 IQCC (ENSNVIG00000024263) CCDC28B (ENSNVIG00000024262) #7 TXLNA (ENSNVIG00000024259) #8 KPNA6 (ENSNVIG00000024252) #9 TMEM39B (ENSNVIG00000024249) #10 ENSNVIG00000024246 #10 KHDRBS1 (ENSNVIG00000024241) #11 PTP4A2 (ENSNVIG00000024240) #12 ENSNVIG00000024238 #13 ADGRB2 (ENSNVIG00000024172) #14 COL16A1 (ENSNVIG00000024163) PEF1 (ENSNVIG00000024162) #17 HCRTR1 (ENSNVIG00000024161) #18 TINAGL1 (ENSNVIG00000024159) #19 SERINC2 (ENSNVIG00000024153) #21 FABPH (ENSNVIG00000024151) #22 ZCCHC17 (ENSNVIG00000024150) #23 SNR40 (ENSNVIG00000024147) #24 NKAIN1 (ENSNVIG00000024142) #25 PUM1 (ENSNVIG00000024082) #26 SDC3 (ENSNVIG00000024078) #27 LAPM5 (ENSNVIG00000024073) #28 MATN1 (ENSNVIG00000024071) #29 ENSNVIG00000024069 PTPRU (ENSNVIG00000024060) #30 MECR (ENSNVIG00000024055) #31 SRSF4 (ENSNVIG00000024050) #32 TMEM200B (ENSNVIG00000024049) #33 EPB41 (ENSNVIG00000023862) #34 OPRD1 (ENSNVIG00000023851) #35 YTHDF2 (ENSNVIG00000023849) #36 Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00940000155104.k #22 Giant Panda MODERN SPECIES 1343 ENSAMEG00000026188 #22 Ursidae ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718.l #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.l #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00390000000885.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Ursus ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718.l #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.l #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079.o #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00390000000885.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000156761 #36 Polar bear MODERN SPECIES 189 ENSUMAG00000008447 CCDC28B (ENSUMAG00000008448) #7 TXLNA (ENSUMAG00000008458) #8 KPNA6 (ENSUMAG00000008518) #9 TMEM39B (ENSUMAG00000008531) #10 KHDRBS1 (ENSUMAG00000008568) #11 PTP4A2 (ENSUMAG00000008574) #12 ENSUMAG00000008598 #13 ADGRB2 (ENSUMAG00000008682) #14 COL16A1 (ENSUMAG00000009136) PEF1 (ENSUMAG00000009169) #17 HCRTR1 (ENSUMAG00000009171) #18 TINAGL1 (ENSUMAG00000009176) #19 ENSUMAG00000009179 #20 SERINC2 (ENSUMAG00000009183) #21 FABP3 (ENSUMAG00000009186) #22 ENSUMAG00000009188 #23 SNRNP40 (ENSUMAG00000009191) #24 NKAIN1 (ENSUMAG00000009198) #25 PUM1 (ENSUMAG00000009211) #26 LAPTM5 (ENSUMAG00000009235) #28 MATN1 (ENSUMAG00000009240) #29 PTPRU (ENSUMAG00000009390) #30 MECR (ENSUMAG00000010949) #31 ENSUMAG00000010957 ENSUMAG00000010964 EPB41 (ENSUMAG00000010982) #34 YTHDF2 (ENSUMAG00000011040) #36 GMEB1 (ENSUMAG00000011042) #37 TAF12 (ENSUMAG00000011046) RAB42 (ENSUMAG00000011052) American black bear MODERN SPECIES 213 FABP3 (ENSUAMG00000018257) #22 ENSUAMG00000018258 #23 SNRNP40 (ENSUAMG00000018260) #24 NKAIN1 (ENSUAMG00000018261) #25 ENSUAMG00000018262 #26 ENSUAMG00000018266 #26 SDC3 (ENSUAMG00000018267) #27 LAPTM5 (ENSUAMG00000018268) #28 MATN1 (ENSUAMG00000018269) #29 Giant Panda MODERN SPECIES 11 DCDC2B (ENSAMEG00000007821) IQCC (ENSAMEG00000007823) TXLNA (ENSAMEG00000007842) #8 KPNA6 (ENSAMEG00000007879) #9 TMEM39B (ENSAMEG00000007943) #10 KHDRBS1 (ENSAMEG00000007969) #11 PTP4A2 (ENSAMEG00000025118) #12 SPOCD1 (ENSAMEG00000017802) #13 ADGRB2 (ENSAMEG00000017786) #14 COL16A1 (ENSAMEG00000027160) PEF1 (ENSAMEG00000017781) #17 HCRTR1 (ENSAMEG00000017770) #18 TINAGL1 (ENSAMEG00000017754) #19 ENSAMEG00000017744 #20 SERINC2 (ENSAMEG00000017719) #21 ENSAMEG00000017717 #22 ZCCHC17 (ENSAMEG00000017710) #23 SNRNP40 (ENSAMEG00000017689) #24 NKAIN1 (ENSAMEG00000017682) #25 PUM1 (ENSAMEG00000017656) #26 SDC3 (ENSAMEG00000024696) #27 LAPTM5 (ENSAMEG00000017647) #28 PTPRU (ENSAMEG00000000455) #30 MECR (ENSAMEG00000000564) #31 SRSF4 (ENSAMEG00000025913) #32 ENSAMEG00000020210 TMEM200B (ENSAMEG00000030570) #33 EPB41 (ENSAMEG00000011446) #34 OPRD1 (ENSAMEG00000011437) #35 YTHDF2 (ENSAMEG00000011429) #36 GMEB1 (ENSAMEG00000011405) #37 Canidae ANCESTRAL SPECIES 14 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00390000013067.a.a ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Red fox MODERN SPECIES 103 ENSVVUG00000015100 DCDC2B (ENSVVUG00000015092) IQCC (ENSVVUG00000015085) CCDC28B (ENSVVUG00000015064) #7 TXLNA (ENSVVUG00000015057) #8 KPNA6 (ENSVVUG00000015050) #9 TMEM39B (ENSVVUG00000015039) #10 KHDRBS1 (ENSVVUG00000015032) #11 PTP4A2 (ENSVVUG00000015025) #12 ENSVVUG00000015008 #13 ADGRB2 (ENSVVUG00000014710) #14 PEF1 (ENSVVUG00000014698) #17 HCRTR1 (ENSVVUG00000014694) #18 TINAGL1 (ENSVVUG00000014683) #19 SERINC2 (ENSVVUG00000014676) #21 FABP3 (ENSVVUG00000014673) #22 ENSVVUG00000014670 #23 ENSVVUG00000014666 SNRNP40 (ENSVVUG00000014661) #24 NKAIN1 (ENSVVUG00000014660) #25 PUM1 (ENSVVUG00000014631) #26 SDC3 (ENSVVUG00000014622) #27 LAPTM5 (ENSVVUG00000014616) #28 MATN1 (ENSVVUG00000014610) #29 ENSVVUG00000014580 PTPRU (ENSVVUG00000012797) #30 MECR (ENSVVUG00000012707) #31 ENSVVUG00000012696 SRSF4 (ENSVVUG00000012690) #32 TMEM200B (ENSVVUG00000012687) #33 EPB41 (ENSVVUG00000012664) #34 Canis_lupus ANCESTRAL SPECIES 6 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363.w #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00390000013067.a.a ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Dog MODERN SPECIES 11 DCDC2B (ENSCAFG00845005026) ENSCAFG00845005039 CCDC28B (ENSCAFG00845005050) #7 TXLNA (ENSCAFG00845005054) #8 KPNA6 (ENSCAFG00845005057) #9 TMEM39B (ENSCAFG00845005063) #10 KHDRBS1 (ENSCAFG00845005081) #11 PTP4A2 (ENSCAFG00845005093) #12 ENSCAFG00845005129 #13 ADGRB2 (ENSCAFG00845005333) #14 COL16A1 (ENSCAFG00845005746) PEF1 (ENSCAFG00845005805) #17 HCRTR1 (ENSCAFG00845005853) #18 TINAGL1 (ENSCAFG00845005917) #19 SERINC2 (ENSCAFG00845005979) #21 FABP3 (ENSCAFG00845006076) #22 ZCCHC17 (ENSCAFG00845006145) #23 SNRNP40 (ENSCAFG00845006219) #24 NKAIN1 (ENSCAFG00845006311) #25 PUM1 (ENSCAFG00845006517) #26 SDC3 (ENSCAFG00845007282) #27 LAPTM5 (ENSCAFG00845007384) #28 MATN1 (ENSCAFG00845007456) #29 PTPRU (ENSCAFG00845007699) #30 MECR (ENSCAFG00845008187) #31 ENSCAFG00845008272 SRSF4 (ENSCAFG00845008307) #32 TMEM200B (ENSCAFG00845008383) #33 EPB41 (ENSCAFG00845008658) #34 OPRD1 (ENSCAFG00845009543) #35 YTHDF2 (ENSCAFG00845009574) #36 Dingo MODERN SPECIES 41 TMEM234 (ENSCAFG00020025349) DCDC2B (ENSCAFG00020025344) IQCC (ENSCAFG00020025342) CCDC28B (ENSCAFG00020025340) #7 TXLNA (ENSCAFG00020025332) #8 KPNA6 (ENSCAFG00020025180) #9 TMEM39B (ENSCAFG00020025156) #10 KHDRBS1 (ENSCAFG00020025153) #11 PTP4A2 (ENSCAFG00020025152) #12 ADGRB2 (ENSCAFG00020024936) #14 COL16A1 (ENSCAFG00020024875) PEF1 (ENSCAFG00020024871) #17 HCRTR1 (ENSCAFG00020024868) #18 TINAGL1 (ENSCAFG00020024850) #19 SERINC2 (ENSCAFG00020024846) #21 FABP3 (ENSCAFG00020024841) #22 ENSCAFG00020024828 #23 SNRNP40 (ENSCAFG00020024822) #24 NKAIN1 (ENSCAFG00020024820) #25 PUM1 (ENSCAFG00020024616) #26 SDC3 (ENSCAFG00020024595) #27 LAPTM5 (ENSCAFG00020024579) #28 MATN1 (ENSCAFG00020024574) #29 ENSCAFG00020024568 PTPRU (ENSCAFG00020024014) #30 MECR (ENSCAFG00020023972) #31 ENSCAFG00020023966 SRSF4 (ENSCAFG00020023963) #32 TMEM200B (ENSCAFG00020023960) #33 EPB41 (ENSCAFG00020023692) #34 OPRD1 (ENSCAFG00020023627) #35 Felidae ANCESTRAL SPECIES 18 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Cat MODERN SPECIES 239 IQCC (ENSFCAG00000012479) CCDC28B (ENSFCAG00000012478) #7 TXLNA (ENSFCAG00000027741) #8 KPNA6 (ENSFCAG00000000456) #9 TMEM39B (ENSFCAG00000003036) #10 KHDRBS1 (ENSFCAG00000006511) #11 PTP4A2 (ENSFCAG00000044159) #12 SPOCD1 (ENSFCAG00000052810) #13 ADGRB2 (ENSFCAG00000015677) #14 COL16A1 (ENSFCAG00000015669) PEF1 (ENSFCAG00000022785) #17 HCRTR1 (ENSFCAG00000015666) #18 TINAGL1 (ENSFCAG00000015664) #19 ENSFCAG00000025357 #20 SERINC2 (ENSFCAG00000004198) #21 FABP3 (ENSFCAG00000028555) #22 ZCCHC17 (ENSFCAG00000004196) #23 SNRNP40 (ENSFCAG00000004195) #24 NKAIN1 (ENSFCAG00000045405) #25 PUM1 (ENSFCAG00000010374) #26 SDC3 (ENSFCAG00000010378) #27 LAPTM5 (ENSFCAG00000022721) #28 MATN1 (ENSFCAG00000028893) #29 PTPRU (ENSFCAG00000002203) #30 MECR (ENSFCAG00000002202) #31 SRSF4 (ENSFCAG00000027821) #32 TMEM200B (ENSFCAG00000026969) #33 EPB41 (ENSFCAG00000007752) #34 YTHDF2 (ENSFCAG00000012446) #36 GMEB1 (ENSFCAG00000018209) #37 TAF12 (ENSFCAG00000029658) Panthera ANCESTRAL SPECIES 4 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT01030000238400 Tiger MODERN SPECIES 383 DCDC2B (ENSPTIG00000016307) IQCC (ENSPTIG00000015691) CCDC28B (ENSPTIG00000013947) #7 TXLNA (ENSPTIG00000011523) #8 KPNA6 (ENSPTIG00000011029) #9 TMEM39B (ENSPTIG00000010261) #10 KHDRBS1 (ENSPTIG00000007835) #11 PTP4A2 (ENSPTIG00000001830) #12 ADGRB2 (ENSPTIG00000019491) #14 COL16A1 (ENSPTIG00000008255) PEF1 (ENSPTIG00000000902) #17 HCRTR1 (ENSPTIG00000020803) #18 TINAGL1 (ENSPTIG00000019282) #19 ENSPTIG00000017797 #20 SERINC2 (ENSPTIG00000013724) #21 FABP3 (ENSPTIG00000013482) #22 ZCCHC17 (ENSPTIG00000010650) #23 SNRNP40 (ENSPTIG00000009045) #24 NKAIN1 (ENSPTIG00000008164) #25 PUM1 (ENSPTIG00000010798) #26 SDC3 (ENSPTIG00000009773) #27 LAPTM5 (ENSPTIG00000008231) #28 MATN1 (ENSPTIG00000004971) #29 Panthera_a ANCESTRAL SPECIES 14 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT01030000238400 leopard MODERN SPECIES 127 IQCC (ENSPPRG00000010633) CCDC28B (ENSPPRG00000010624) #7 TXLNA (ENSPPRG00000010535) #8 KPNA6 (ENSPPRG00000010224) #9 TMEM39B (ENSPPRG00000009830) #10 KHDRBS1 (ENSPPRG00000009461) #11 PTP4A2 (ENSPPRG00000008367) #12 ENSPPRG00000008092 #13 ADGRB2 (ENSPPRG00000007298) #14 COL16A1 (ENSPPRG00000005381) PEF1 (ENSPPRG00000004793) #17 HCRTR1 (ENSPPRG00000004639) #18 TINAGL1 (ENSPPRG00000004222) #19 ENSPPRG00000004049 #20 SERINC2 (ENSPPRG00000003681) #21 FABP3 (ENSPPRG00000003186) #22 ENSPPRG00000003044 #23 SNRNP40 (ENSPPRG00000001741) #24 NKAIN1 (ENSPPRG00000001569) #25 PUM1 (ENSPPRG00000001370) #26 SDC3 (ENSPPRG00000023387) #27 LAPTM5 (ENSPPRG00000024111) #28 MATN1 (ENSPPRG00000024148) #29 lion MODERN SPECIES 8 IQCC (ENSPLOG00000006445) CCDC28B (ENSPLOG00000006486) #7 TXLNA (ENSPLOG00000006509) #8 KPNA6 (ENSPLOG00000006524) #9 TMEM39B (ENSPLOG00000006558) #10 KHDRBS1 (ENSPLOG00000006616) #11 PTP4A2 (ENSPLOG00000006684) #12 ENSPLOG00000006734 #13 ADGRB2 (ENSPLOG00000007005) #14 COL16A1 (ENSPLOG00000007816) PEF1 (ENSPLOG00000008094) #17 HCRTR1 (ENSPLOG00000008121) #18 TINAGL1 (ENSPLOG00000008299) #19 ENSPLOG00000008479 #20 SERINC2 (ENSPLOG00000008596) #21 FABP3 (ENSPLOG00000008749) #22 ZCCHC17 (ENSPLOG00000008804) #23 SNRNP40 (ENSPLOG00000008874) #24 NKAIN1 (ENSPLOG00000008936) #25 ENSPLOG00000008981 PUM1 (ENSPLOG00000009086) #26 SDC3 (ENSPLOG00000009532) #27 LAPTM5 (ENSPLOG00000009567) #28 MATN1 (ENSPLOG00000009594) #29 PTPRU (ENSPLOG00000009674) #30 MECR (ENSPLOG00000010095) #31 SRSF4 (ENSPLOG00000010130) #32 TMEM200B (ENSPLOG00000010145) #33 EPB41 (ENSPLOG00000010573) #34 OPRD1 (ENSPLOG00000012612) #35 YTHDF2 (ENSPLOG00000012653) #36 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Chiroptera ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Megabat MODERN SPECIES 3493 SERINC2 (ENSPVAG00000014749) #21 FABP3 (ENSPVAG00000014748) #22 ZCCHC17 (ENSPVAG00000014747) #23 SNRNP40 (ENSPVAG00000014746) #24 NKAIN1 (ENSPVAG00000014745) #25 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Greater horseshoe bat MODERN SPECIES 27 TMEM234 (ENSRFEG00010013438) ENSRFEG00010013228 TXLNA (ENSRFEG00010013068) #8 KPNA6 (ENSRFEG00010013020) #9 TMEM39B (ENSRFEG00010012978) #10 KHDRBS1 (ENSRFEG00010012885) #11 PRL-2 (ENSRFEG00010012695) #12 SPOCD1 (ENSRFEG00010012355) #13 ADGRB2 (ENSRFEG00010010464) #14 COL16A1 (ENSRFEG00010010120) PEF1 (ENSRFEG00010010072) #17 HCRTR1 (ENSRFEG00010009916) #18 TINAGL1 (ENSRFEG00010009829) #19 ENSRFEG00010009671 #20 SERINC2 (ENSRFEG00010009481) #21 FABP3 (ENSRFEG00010009426) #22 ZCCHC17 (ENSRFEG00010009305) #23 SNRNP40 (ENSRFEG00010009229) #24 NKAIN1 (ENSRFEG00010009190) #25 PUM1 (ENSRFEG00010008671) #26 SDC3 (ENSRFEG00010008579) #27 LAPTM5 (ENSRFEG00010008534) #28 MATN1 (ENSRFEG00010008435) #29 PTPRU (ENSRFEG00010008351) #30 MECR (ENSRFEG00010008283) #31 SRSF4 (ENSRFEG00010008251) #32 TMEM200B (ENSRFEG00010008234) #33 ENSRFEG00010008226 EPB41 (ENSRFEG00010007813) #34 OPRD1 (ENSRFEG00010007729) #35 ENSRFEG00010007704 Microbat DUPLICATION Microbat MODERN SPECIES 1247 MISP3 (ENSMLUG00000017771) C19orf67 (ENSMLUG00000024756) PRKACA (ENSMLUG00000008255) ASF1B (ENSMLUG00000000537) ADGRL1 (ENSMLUG00000000503) ADGRE5 (ENSMLUG00000009235) ENSMLUG00000009280 PKN1 (ENSMLUG00000008347) PTGER1 (ENSMLUG00000008382) GIPC1 (ENSMLUG00000008387) DNAJB1 (ENSMLUG00000012065) TECR (ENSMLUG00000008415) ENSMLUG00000008446 CLEC17A (ENSMLUG00000008456) ADGRE3 (ENSMLUG00000010862) ENSMLUG00000022362 #22 ENSMLUG00000010883 ENSMLUG00000025927 ENSMLUG00000028398 ENSMLUG00000028004 ENSMLUG00000022908 ENSMLUG00000024262 ENSMLUG00000024081 Microbat MODERN SPECIES 1374 ENSMLUG00000027317 #20 SERINC2 (ENSMLUG00000000597) #21 FABP3 (ENSMLUG00000013609) #22 ZCCHC17 (ENSMLUG00000000594) #23 ENSMLUG00000000586 #24 NKAIN1 (ENSMLUG00000006038) #25 PUM1 (ENSMLUG00000006490) #26 SDC3 (ENSMLUG00000006485) #27 LAPTM5 (ENSMLUG00000001194) #28 MATN1 (ENSMLUG00000001190) #29 Equus ANCESTRAL SPECIES 2 ENSGT00390000017195 ENSGT00500000044870.b.a.b ##7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT01090000263471 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Donkey MODERN SPECIES 25 ENSEASG00005023676 ENSEASG00005028960 ##7 TXLNA (ENSEASG00005010943) #8 KPNA6 (ENSEASG00005010939) #9 TMEM39B (ENSEASG00005010933) #10 KHDRBS1 (ENSEASG00005010927) #11 ENSEASG00005037968 PTP4A2 (ENSEASG00005028274) #12 SPOCD1 (ENSEASG00005010908) #13 ADGRB2 (ENSEASG00005010827) #14 COL16A1 (ENSEASG00005010825) PEF1 (ENSEASG00005010824) #17 HCRTR1 (ENSEASG00005010823) #18 TINAGL1 (ENSEASG00005010822) #19 SERINC2 (ENSEASG00005010821) #21 FABP3 (ENSEASG00005033124) #22 ZCCHC17 (ENSEASG00005010819) #23 SNRNP40 (ENSEASG00005010818) #24 NKAIN1 (ENSEASG00005010817) #25 PUM1 (ENSEASG00005010813) #26 SDC3 (ENSEASG00005010812) #27 LAPTM5 (ENSEASG00005010811) #28 MATN1 (ENSEASG00005010809) #29 PTPRU (ENSEASG00005010255) #30 MECR (ENSEASG00005010173) #31 ENSEASG00005024193 SRSF4 (ENSEASG00005010168) #32 TMEM200B (ENSEASG00005030825) #33 EPB41 (ENSEASG00005010160) #34 OPRD1 (ENSEASG00005010156) #35 YTHDF2 (ENSEASG00005010152) #36 Horse DUPLICATION Horse MODERN SPECIES 11 TMEM234 (ENSECAG00000014363) IQCC (ENSECAG00000015656) TXLNA (ENSECAG00000019321) #8 KPNA6 (ENSECAG00000004549) #9 TMEM39B (ENSECAG00000013603) #10 KHDRBS1 (ENSECAG00000019346) #11 PTP4A2 (ENSECAG00000005653) #12 SPOCD1 (ENSECAG00000009300) #13 ADGRB2 (ENSECAG00000009739) #14 COL16A1 (ENSECAG00000024119) PEF1 (ENSECAG00000021283) #17 HCRTR1 (ENSECAG00000008995) #18 TINAGL1 (ENSECAG00000014247) #19 SERINC2 (ENSECAG00000020956) #21 ZCCHC17 (ENSECAG00000025040) #23 FABP3 (ENSECAG00000024852) #22 SNRNP40 (ENSECAG00000006955) #24 NKAIN1 (ENSECAG00000016649) #25 PUM1 (ENSECAG00000021369) #26 LAPTM5 (ENSECAG00000000686) #28 MATN1 (ENSECAG00000008747) #29 PTPRU (ENSECAG00000012344) #30 MECR (ENSECAG00000015370) #31 ENSECAG00000045698 SRSF4 (ENSECAG00000021350) #32 EPB41 (ENSECAG00000022255) #34 TMEM200B (ENSECAG00000040505) #33 OPRD1 (ENSECAG00000022616) #35 YTHDF2 (ENSECAG00000023108) #36 GMEB1 (ENSECAG00000009764) #37 TAF12 (ENSECAG00000012688) Horse MODERN SPECIES 11 ENSECAG00000014997 ENSECAG00000030364 TRIM61 (ENSECAG00000014985) ENSECAG00000038371 ENSECAG00000042205 ENSECAG00000034596 ENSECAG00000014971 ENSECAG00000042254 TRIM75 (ENSECAG00000036019) TMEM192 (ENSECAG00000014003) KLHL2 (ENSECAG00000010727) MSMO1 (ENSECAG00000010554) CPE (ENSECAG00000009256) TLL1 (ENSECAG00000002251) SPOCK3 (ENSECAG00000024906) ENSECAG00000032479 #22 ANXA10 (ENSECAG00000024897) ENSECAG00000048862 ENSECAG00000032492 DDX60 (ENSECAG00000053648) DDX60L (ENSECAG00000024062) ENSECAG00000036595 PALLD (ENSECAG00000023122) CBR4 (ENSECAG00000022089) ENSECAG00000034250 SH3RF1 (ENSECAG00000021240) NEK1 (ENSECAG00000017058) CLCN3 (ENSECAG00000014556) HPF1 (ENSECAG00000013735) MFAP3L (ENSECAG00000002425) AADAT (ENSECAG00000013400) Artiodactyla DUPLICATION Artiodactyla DUPLICATION Artiodactyla ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Suina ANCESTRAL SPECIES 10 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Pig DUPLICATION Pig MODERN SPECIES 14 IQCC (ENSSSCG00000003610) CCDC28B (ENSSSCG00000031514) #7 TXLNA (ENSSSCG00000003617) #8 KPNA6 (ENSSSCG00000034017) #9 TMEM39B (ENSSSCG00000032563) #10 KHDRBS1 (ENSSSCG00000023122) #11 PTP4A2 (ENSSSCG00000039885) #12 SPOCD1 (ENSSSCG00000003606) #13 ADGRB2 (ENSSSCG00000003604) #14 COL16A1 (ENSSSCG00000003603) PEF1 (ENSSSCG00000034810) #17 HCRTR1 (ENSSSCG00000003601) #18 TINAGL1 (ENSSSCG00000003600) #19 ENSSSCG00000003599 #20 SERINC2 (ENSSSCG00000023585) #21 FABP3 (ENSSSCG00000036883) #22 ZCCHC17 (ENSSSCG00000031639) #23 SNRNP40 (ENSSSCG00000003596) #24 NKAIN1 (ENSSSCG00000032193) #25 PUM1 (ENSSSCG00000003591) #26 SDC3 (ENSSSCG00000003592) #27 LAPTM5 (ENSSSCG00000025034) #28 MATN1 (ENSSSCG00000022554) #29 ENSSSCG00000049560 PTPRU (ENSSSCG00000003590) #30 MECR (ENSSSCG00000003589) #31 SRSF4 (ENSSSCG00000051929) #32 TMEM200B (ENSSSCG00000058017) #33 ENSSSCG00000059283 EPB41 (ENSSSCG00000003586) #34 OPRD1 (ENSSSCG00000047080) #35 Pig MODERN SPECIES 13 DDX23 (ENSSSCG00000000176) CACNB3 (ENSSSCG00000032967) ADCY6 (ENSSSCG00000000175) TEX49 (ENSSSCG00000000174) CCNT1 (ENSSSCG00000038181) C12orf75 (ENSSSCG00000031661) NUAK1 (ENSSSCG00000032861) CKAP4 (ENSSSCG00000000171) TCP11L2 (ENSSSCG00000024881) POLR3B (ENSSSCG00000057209) RFX4 (ENSSSCG00000052141) RIC8B (ENSSSCG00000000167) TMEM263 (ENSSSCG00000038968) MTERF2 (ENSSSCG00000039109) CRY1 (ENSSSCG00000000164) ENSSSCG00000036971 #22 ABTB3 (ENSSSCG00000000162) PWP1 (ENSSSCG00000000161) PRDM4 (ENSSSCG00000000160) ASCL4 (ENSSSCG00000000159) RTCB (ENSSSCG00000000158) BPIFC (ENSSSCG00000000157) FBXO7 (ENSSSCG00000000156) SYN3 (ENSSSCG00000040453) TIMP3 (ENSSSCG00000031866) ENSSSCG00000000151 ENSSSCG00000046062 RBFOX2 (ENSSSCG00000000152) ENSSSCG00000039706 ENSSSCG00000000148 MYH9 (ENSSSCG00000000145) Chacoan peccary MODERN SPECIES 192 VPS13C (ENSCWAG00000000579) ENSCWAG00000000676 ENSCWAG00000000689 #22 ENSCWAG00000000701 ENSCWAG00000000707 ENSCWAG00000000712 TLN2 (ENSCWAG00000000763) ENSCWAG00000000960 TPM1 (ENSCWAG00000001033) LACTB (ENSCWAG00000001493) RPS27L (ENSCWAG00000001510) RAB8B (ENSCWAG00000001533) APH1B (ENSCWAG00000001558) CA12 (ENSCWAG00000001590) USP3 (ENSCWAG00000001654) FBXL22 (ENSCWAG00000001746) HERC1 (ENSCWAG00000001772) DAPK2 (ENSCWAG00000001815) Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Pecora ANCESTRAL SPECIES 16 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Yarkand deer MODERN SPECIES 31 IQCC (ENSCHYG00000013128) TXLNA (ENSCHYG00000013058) #8 KPNA6 (ENSCHYG00000013007) #9 TMEM39B (ENSCHYG00000012917) #10 KHDRBS1 (ENSCHYG00000012801) #11 ENSCHYG00000012576 #12 SPOCD1 (ENSCHYG00000012395) #13 ADGRB2 (ENSCHYG00000010702) #14 COL16A1 (ENSCHYG00000009055) PEF1 (ENSCHYG00000008877) #17 HCRTR1 (ENSCHYG00000008769) #18 ENSCHYG00000008740 TINAGL1 (ENSCHYG00000008643) #19 ENSCHYG00000008439 #20 SERINC2 (ENSCHYG00000008301) #21 ENSCHYG00000008252 #22 ENSCHYG00000008153 ZCCHC17 (ENSCHYG00000007996) #23 SNRNP40 (ENSCHYG00000007905) #24 NKAIN1 (ENSCHYG00000007858) #25 ENSCHYG00000007839 PUM1 (ENSCHYG00000007161) #26 SDC3 (ENSCHYG00000007038) #27 LAPTM5 (ENSCHYG00000006997) #28 MATN1 (ENSCHYG00000006958) #29 PTPRU (ENSCHYG00000006797) #30 MECR (ENSCHYG00000006636) #31 SRSF4 (ENSCHYG00000006560) #32 TMEM200B (ENSCHYG00000006532) #33 EPB41 (ENSCHYG00000006045) #34 OPRD1 (ENSCHYG00000005893) #35 Percora_a ANCESTRAL SPECIES 5 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Bovidae ANCESTRAL SPECIES 8 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Caprinae ANCESTRAL SPECIES 5 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Rambouillet Sheep MODERN SPECIES 11 IQCC (ENSOARG00020021634) CCDC28B (ENSOARG00020021703) #7 TXLNA (ENSOARG00020021753) #8 KPNA6 (ENSOARG00020021837) #9 TMEM39B (ENSOARG00020006564) #10 KHDRBS1 (ENSOARG00020006608) #11 PTP4A2 (ENSOARG00020006704) #12 SPOCD1 (ENSOARG00020006930) #13 ADGRB2 (ENSOARG00020007152) #14 COL16A1 (ENSOARG00020008158) PEF1 (ENSOARG00020010058) #17 HCRTR1 (ENSOARG00020010140) #18 TINAGL1 (ENSOARG00020010269) #19 ENSOARG00020010572 #20 SERINC2 (ENSOARG00020010687) #21 FABP3 (ENSOARG00020010991) #22 ZCCHC17 (ENSOARG00020011140) #23 SNRNP40 (ENSOARG00020011614) #24 PUM1 (ENSOARG00020011853) #26 SDC3 (ENSOARG00020013780) #27 LAPTM5 (ENSOARG00020013915) #28 MATN1 (ENSOARG00020013966) #29 PTPRU (ENSOARG00020014061) #30 MECR (ENSOARG00020015587) #31 SRSF4 (ENSOARG00020015684) #32 TMEM200B (ENSOARG00020015783) #33 EPB41 (ENSOARG00020015888) #34 OPRD1 (ENSOARG00020017834) #35 YTHDF2 (ENSOARG00020017875) #36 GMEB1 (ENSOARG00020017971) #37 ENSOARG00020018054 Goat MODERN SPECIES 11 IQCC (ENSCHIG00000020479) CCDC28B (ENSCHIG00000011414) #7 TXLNA (ENSCHIG00000026604) #8 KPNA6 (ENSCHIG00000016075) #9 TMEM39B (ENSCHIG00000018445) #10 KHDRBS1 (ENSCHIG00000013092) #11 PTP4A2 (ENSCHIG00000025158) #12 SPOCD1 (ENSCHIG00000022249) #13 ADGRB2 (ENSCHIG00000024973) #14 COL16A1 (ENSCHIG00000023822) PEF1 (ENSCHIG00000018305) #17 HCRTR1 (ENSCHIG00000011364) #18 TINAGL1 (ENSCHIG00000021015) #19 ENSCHIG00000006579 #20 SERINC2 (ENSCHIG00000008007) #21 FABP3 (ENSCHIG00000014068) #22 ZCCHC17 (ENSCHIG00000015629) #23 SNRNP40 (ENSCHIG00000009344) #24 NKAIN1 (ENSCHIG00000026515) #25 PUM1 (ENSCHIG00000012952) #26 ENSCHIG00000015655 #27 LAPTM5 (ENSCHIG00000013968) #28 MATN1 (ENSCHIG00000008350) #29 PTPRU (ENSCHIG00000018867) #30 MECR (ENSCHIG00000007022) #31 SRSF4 (ENSCHIG00000022096) #32 TMEM200B (ENSCHIG00000005464) #33 EPB41 (ENSCHIG00000014338) #34 OPRD1 (ENSCHIG00000016495) #35 YTHDF2 (ENSCHIG00000022985) #36 GMEB1 (ENSCHIG00000000629) #37 Bovinae ANCESTRAL SPECIES 5 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT00390000008767.b.d.b.a ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.a #22 ENSGT00510000047363.c #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Bos ANCESTRAL SPECIES 6 ENSGT00940000158303 #8 ENSGT00390000008767.b.d.b.a ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00960000191283 ENSGT00940000155104.q.a #22 ENSGT00510000047363.c #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.b.a ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Bos_a ANCESTRAL SPECIES 4 ENSGT00940000158303 #8 ENSGT00390000008767.b.d.b.a ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00960000191283 ENSGT00940000155104.q.a #22 ENSGT00510000047363.c #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.b.a ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Domestic yak MODERN SPECIES 11 ENSBGRG00000011364 KPNA6 (ENSBGRG00000011110) #9 TMEM39B (ENSBGRG00000011031) #10 KHDRBS1 (ENSBGRG00000010825) #11 ENSBGRG00000010792 PTP4A2 (ENSBGRG00000010487) #12 SPOCD1 (ENSBGRG00000010336) #13 ADGRB2 (ENSBGRG00000009144) #14 COL16A1 (ENSBGRG00000008612) PEF1 (ENSBGRG00000008534) #17 HCRTR1 (ENSBGRG00000008440) #18 TINAGL1 (ENSBGRG00000008317) #19 ENSBGRG00000008192 #20 SERINC2 (ENSBGRG00000007968) #21 ENSBGRG00000007937 H-FABP (ENSBGRG00000007849) #22 ENSBGRG00000007511 #23 SNRNP40 (ENSBGRG00000007293) #24 ENSBGRG00000007229 #25 ENSBGRG00000007212 PUM1 (ENSBGRG00000022335) #26 SDC3 (ENSBGRG00000022187) #27 LAPTM5 (ENSBGRG00000022099) #28 MATN1 (ENSBGRG00000022057) #29 PTPRU (ENSBGRG00000021855) #30 MECR (ENSBGRG00000021789) #31 SRSF4 (ENSBGRG00000021699) #32 TMEM200B (ENSBGRG00000021675) #33 EPB41 (ENSBGRG00000016000) #34 OPRD1 (ENSBGRG00000015656) #35 YTHDF2 (ENSBGRG00000015573) #36 Wild yak MODERN SPECIES 1876 TXLNA (ENSBMUG00000008713) #8 ENSBMUG00000008700 KPNA6 (ENSBMUG00000008689) #9 TMEM39B (ENSBMUG00000008680) #10 KHDRBS1 (ENSBMUG00000008662) #11 PTP4A2 (ENSBMUG00000008583) #12 ENSBMUG00000008539 #13 ADGRB2 (ENSBMUG00000008460) #14 COL16A1 (ENSBMUG00000008384) PEF1 (ENSBMUG00000008334) #17 HCRTR1 (ENSBMUG00000008325) #18 TINAGL1 (ENSBMUG00000008291) #19 ENSBMUG00000008184 #20 ENSBMUG00000008171 SERINC2 (ENSBMUG00000008159) #21 ENSBMUG00000008083 #22 ZCCHC17 (ENSBMUG00000008010) #23 SNRNP40 (ENSBMUG00000007915) #24 NKAIN1 (ENSBMUG00000007902) #25 PUM1 (ENSBMUG00000007497) #26 SDC3 (ENSBMUG00000007334) #27 LAPTM5 (ENSBMUG00000007307) #28 MATN1 (ENSBMUG00000007280) #29 Bos_b ANCESTRAL SPECIES 20 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT01030000234623.a.a.b #21 ENSGT00960000191283 ENSGT00940000155104.q.a #22 ENSGT00510000047363.c #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.b.a ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00390000007797.a.a ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 Hybrid Bos Indicus MODERN SPECIES 11 TMEM39B (ENSBIXG00005013001) #10 KHDRBS1 (ENSBIXG00005012974) #11 ENSBIXG00005012926 ENSBIXG00005001439 PTP4A2 (ENSBIXG00005012848) #12 SPOCD1 (ENSBIXG00005001401) #13 ADGRB2 (ENSBIXG00005012674) #14 COL16A1 (ENSBIXG00005007002) ENSBIXG00005001345 PEF1 (ENSBIXG00005012479) #17 HCRTR1 (ENSBIXG00005012446) #18 TINAGL1 (ENSBIXG00005012419) #19 ENSBIXG00005001320 #20 SERINC2 (ENSBIXG00005012372) #21 ENSBIXG00005001298 ENSBIXG00005012303 #22 ZCCHC17 (ENSBIXG00005001280) #23 SNRNP40 (ENSBIXG00005001257) #24 NKAIN1 (ENSBIXG00005012157) #25 ENSBIXG00005012110 PUM1 (ENSBIXG00005006792) #26 ENSBIXG00005011490 SDC3 (ENSBIXG00005011445) #27 LAPTM5 (ENSBIXG00005011398) #28 MATN1 (ENSBIXG00005001095) #29 ENSBIXG00005011338 PTPRU (ENSBIXG00005001071) #30 MECR (ENSBIXG00005007751) #31 SRSF4 (ENSBIXG00005011082) #32 TMEM200B (ENSBIXG00005007469) #33 EPB41 (ENSBIXG00005010985) #34 Cow MODERN SPECIES 11 ENSBTAG00000048869 #8 CLDN12 (ENSBTAG00000019486) SHOX (ENSBTAG00000026788) ENSBTAG00000051364 ENSBTAG00000040518 PTP4A2 (ENSBTAG00000039121) #12 SPOCD1 (ENSBTAG00000015715) #13 ADGRB2 (ENSBTAG00000010657) #14 COL16A1 (ENSBTAG00000010050) PEF1 (ENSBTAG00000010378) #17 HCRTR1 (ENSBTAG00000010366) #18 TINAGL1 (ENSBTAG00000013235) #19 ENSBTAG00000039994 #20 SERINC2 (ENSBTAG00000035081) #21 ENSBTAG00000052286 FABP3 (ENSBTAG00000016819) #22 ZCCHC17 (ENSBTAG00000016818) #23 SNRNP40 (ENSBTAG00000016817) #24 NKAIN1 (ENSBTAG00000020159) #25 ENSBTAG00000053976 PUM1 (ENSBTAG00000018979) #26 SDC3 (ENSBTAG00000026676) #27 LAPTM5 (ENSBTAG00000005477) #28 MATN1 (ENSBTAG00000003479) #29 ENSBTAG00000053024 PTPRU (ENSBTAG00000012848) #30 MECR (ENSBTAG00000017253) #31 SRSF4 (ENSBTAG00000013309) #32 TMEM200B (ENSBTAG00000047524) #33 EPB41 (ENSBTAG00000006667) #34 OPRD1 (ENSBTAG00000003202) #35 American bison MODERN SPECIES 3002 TXLNA (ENSBBBG00000012545) #8 ENSBBBG00000012551 KPNA6 (ENSBBBG00000002406) #9 TMEM39B (ENSBBBG00000012580) #10 KHDRBS1 (ENSBBBG00000001836) #11 ENSBBBG00000012624 PTP4A2 (ENSBBBG00000012700) #12 ENSBBBG00000002452 #13 ADGRB2 (ENSBBBG00000013079) #14 COL16A1 (ENSBBBG00000013173) PEF1 (ENSBBBG00000013178) #17 HCRTR1 (ENSBBBG00000013200) #18 TINAGL1 (ENSBBBG00000013245) #19 ENSBBBG00000001634 #20 SERINC2 (ENSBBBG00000013269) #21 ENSBBBG00000002689 #22 ZCCHC17 (ENSBBBG00000013338) #23 SNRNP40 (ENSBBBG00000013361) #24 NKAIN1 (ENSBBBG00000001589) #25 PUM1 (ENSBBBG00000013598) #26 SDC3 (ENSBBBG00000002842) #27 LAPTM5 (ENSBBBG00000013658) #28 MATN1 (ENSBBBG00000013670) #29 Siberian musk deer MODERN SPECIES 353 TXLNA (ENSMMSG00000004929) #8 KPNA6 (ENSMMSG00000004973) #9 TMEM39B (ENSMMSG00000005031) #10 KHDRBS1 (ENSMMSG00000005091) #11 PTP4A2 (ENSMMSG00000005170) #12 ENSMMSG00000005352 ENSMMSG00000005389 #13 ADGRB2 (ENSMMSG00000005621) #14 COL16A1 (ENSMMSG00000007557) PEF1 (ENSMMSG00000007893) #17 HCRTR1 (ENSMMSG00000007936) #18 ENSMMSG00000007956 TINAGL1 (ENSMMSG00000007995) #19 ENSMMSG00000008074 #20 SERINC2 (ENSMMSG00000008124) #21 FABP3 (ENSMMSG00000008209) #22 ENSMMSG00000008249 #23 SNRNP40 (ENSMMSG00000008462) #24 NKAIN1 (ENSMMSG00000008509) #25 PUM1 (ENSMMSG00000008579) #26 SDC3 (ENSMMSG00000009056) #27 LAPTM5 (ENSMMSG00000009109) #28 MATN1 (ENSMMSG00000009155) #29 ENSMMSG00000009209 PTPRU (ENSMMSG00000009248) #30 MECR (ENSMMSG00000009362) #31 SRSF4 (ENSMMSG00000009418) #32 TMEM200B (ENSMMSG00000009448) #33 EPB41 (ENSMMSG00000009727) #34 OPRD1 (ENSMMSG00000017354) #35 YTHDF2 (ENSMMSG00000017379) #36 Artiodactyla ANCESTRAL SPECIES ENSGT00940000155104.q.b #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000155104.q.b #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000155104.q.b #22 Cetacea ANCESTRAL SPECIES ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.v #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT00390000006225.d ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.b #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00960000190201 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Odontoceti ANCESTRAL SPECIES ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.v #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT00390000006225.d ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.b #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.v #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT00390000006225.d ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.q.b #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Odontoceti_b ANCESTRAL SPECIES 22 ENSGT00940000156607.a.a ENSGT00390000014753 ENSGT00950000183120.e.b.a.b ENSGT00940000161153 ENSGT00940000162022 ENSGT00440000033720.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000016722 ENSGT00940000155212 ENSGT00410000025556.a.b ENSGT00940000154399.a.b ENSGT00940000158265 ENSGT00940000155821 ENSGT00390000004175 ENSGT00940000153904.a ENSGT00940000155104.q.b #22 ENSGT00510000047363 #23 ENSGT00390000009151 ENSGT00950000182965.b.`b.b ENSGT00950000183035.a.b.a ENSGT00950000182803.B.d.b ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b.n ENSGT00940000162067 ENSGT00940000158619.k ENSGT00510000047168 ENSGT00940000165039 ENSGT00390000001798 ENSGT00390000006915.c.c.b ENSGT00390000013608 Monodontidae ANCESTRAL SPECIES ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383.h.a #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722.v #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT00950000182995.e.a.b #20 ENSGT00390000006225.d ENSGT00550000076338 ENSGT01030000234623.a.a.b #21 ENSGT01030000236649 ENSGT00940000155104.q.b #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00390000014084.ab.b.b ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Beluga whale MODERN SPECIES 74 IQCC (ENSDLEG00000016388) TXLNA (ENSDLEG00000016350) #8 KPNA6 (ENSDLEG00000016316) #9 TMEM39B (ENSDLEG00000016227) #10 KHDRBS1 (ENSDLEG00000016203) #11 PTP4A2 (ENSDLEG00000016188) #12 ENSDLEG00000016158 #13 ADGRB2 (ENSDLEG00000015967) #14 PEF1 (ENSDLEG00000015936) #17 HCRTR1 (ENSDLEG00000015922) #18 TINAGL1 (ENSDLEG00000021843) #19 ENSDLEG00000021842 ENSDLEG00000021841 SERINC2 (ENSDLEG00000021837) #21 ENSDLEG00000021835 FABP3 (ENSDLEG00000021833) #22 ZCCHC17 (ENSDLEG00000021831) #23 SNRNP40 (ENSDLEG00000021828) #24 NKAIN1 (ENSDLEG00000021826) #25 PUM1 (ENSDLEG00000021801) #26 SDC3 (ENSDLEG00000021797) #27 LAPTM5 (ENSDLEG00000021794) #28 MATN1 (ENSDLEG00000021791) #29 Narwhal MODERN SPECIES 304 KPNA6 (ENSMMNG00015010896) #9 TMEM39B (ENSMMNG00015010925) #10 KHDRBS1 (ENSMMNG00015010948) #11 ENSMMNG00015010999 #12 ENSMMNG00015011068 #13 ADGRB2 (ENSMMNG00015011149) #14 COL16A1 (ENSMMNG00015011287) PEF1 (ENSMMNG00015011366) #17 HCRTR1 (ENSMMNG00015011382) #18 TINAGL1 (ENSMMNG00015011411) #19 ENSMMNG00015011437 #20 ENSMMNG00015011457 SERINC2 (ENSMMNG00015011481) #21 ENSMMNG00015011517 ENSMMNG00015011537 FABP3 (ENSMMNG00015011554) #22 ZCCHC17 (ENSMMNG00015011615) #23 SNRNP40 (ENSMMNG00015011699) #24 NKAIN1 (ENSMMNG00015011715) #25 PUM1 (ENSMMNG00015011776) #26 SDC3 (ENSMMNG00015011885) #27 LAPTM5 (ENSMMNG00015011902) #28 MATN1 (ENSMMNG00015011923) #29 ENSMMNG00015011944 PTPRU (ENSMMNG00015011976) #30 MECR (ENSMMNG00015012012) #31 SRSF4 (ENSMMNG00015012035) #32 TMEM200B (ENSMMNG00015012047) #33 EPB41 (ENSMMNG00015012190) #34 OPRD1 (ENSMMNG00015012577) #35 YTHDF2 (ENSMMNG00015012587) #36 Dolphin MODERN SPECIES 2955 SERINC2 (ENSTTRG00000014874) #21 FABP3 (ENSTTRG00000014872) #22 ZCCHC17 (ENSTTRG00000014870) #23 SNRNP40 (ENSTTRG00000014868) #24 NKAIN1 (ENSTTRG00000014866) #25 Sperm whale MODERN SPECIES 1081 SERINC2 (ENSPCTG00005017054) #21 FABP3 (ENSPCTG00005017306) #22 Blue whale MODERN SPECIES IQCC (ENSBMSG00010005059) CCDC28B (ENSBMSG00010005052) #7 TXLNA (ENSBMSG00010005044) #8 ENSBMSG00010005038 #9 TMEM39B (ENSBMSG00010005017) #10 KHDRBS1 (ENSBMSG00010005001) #11 PTP4A2 (ENSBMSG00010004970) #12 ENSBMSG00010004953 #13 COL16A1 (ENSBMSG00010004723) ENSBMSG00010004691 #17 HCRTR1 (ENSBMSG00010004674) #18 TINAGL1 (ENSBMSG00010004633) #19 ENSBMSG00010004611 ENSBMSG00010004596 SERINC2 (ENSBMSG00010004567) #21 FABP3 (ENSBMSG00010004517) #22 ZCCHC17 (ENSBMSG00010004489) #23 SNRNP40 (ENSBMSG00010004466) #24 NKAIN1 (ENSBMSG00010004451) #25 PUM1 (ENSBMSG00010004270) #26 SDC3 (ENSBMSG00010004227) #27 LAPTM5 (ENSBMSG00010004217) #28 MATN1 (ENSBMSG00010004210) #29 ENSBMSG00010004192 PTPRU (ENSBMSG00010004130) #30 ENSBMSG00010004108 MECR (ENSBMSG00010004086) #31 SRSF4 (ENSBMSG00010004066) #32 TMEM200B (ENSBMSG00010004052) #33 EPB41 (ENSBMSG00010001365) #34 OPRD1 (ENSBMSG00010000919) #35 Pecora ANCESTRAL SPECIES 15 ENSGT00940000160757 ENSGT00940000162749 ENSGT00940000162559 ENSGT00940000163368 ENSGT00940000155233.bb.b ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00550000076374 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355 ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620 ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Percora_a ANCESTRAL SPECIES 18 ENSGT00940000162559 ENSGT00940000163368 ENSGT00940000155233.bb.a ENSGT00940000163666 ENSGT00940000155233.bb.b ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00550000076374 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355 ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620 ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Bovidae ANCESTRAL SPECIES 18 ENSGT00940000162559 ENSGT00940000163368 ENSGT00940000155233.bb.a ENSGT00940000163666 ENSGT00940000155233.bb.b ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00550000076374 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355 ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620 ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Bovinae ANCESTRAL SPECIES 15 ENSGT00940000162559 ENSGT00940000163666 ENSGT00940000155233.bb.b.b ENSGT00940000163368 ENSGT00940000155233.bb.a ENSGT00940000155233.bb.b.a ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355 ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620.a ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Bos ANCESTRAL SPECIES 15 ENSGT00940000162559 ENSGT00940000163666 ENSGT00940000155233.bb.b.b ENSGT00940000163368 ENSGT00940000155233.bb.a ENSGT00940000155233.bb.b.a ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355 ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620.a ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Bos_b ANCESTRAL SPECIES 14 ENSGT00940000155233.bb.b.a ENSGT00940000177749 ENSGT00390000012959.b.u ENSGT00940000162749 ENSGT00940000163368 ENSGT00940000155233.bb.b.b ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355.g ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620.a ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Cow MODERN SPECIES 25 CXCL5 (ENSBTAG00000009812) ENSBTAG00000011961 CXCL2 (ENSBTAG00000027513) ENSBTAG00000051891 CXCL3 (ENSBTAG00000037778) GRO1 (ENSBTAG00000037558) MTHFD2L (ENSBTAG00000043960) EPGN (ENSBTAG00000004052) EREG (ENSBTAG00000010273) AREG (ENSBTAG00000018134) BTC (ENSBTAG00000004237) PARM1 (ENSBTAG00000015919) RCHY1 (ENSBTAG00000007189) THAP6 (ENSBTAG00000007190) ODAPH (ENSBTAG00000050403) ENSBTAG00000046788 #22 CDKL2 (ENSBTAG00000014038) G3BP2 (ENSBTAG00000014041) USO1 (ENSBTAG00000017028) PPEF2 (ENSBTAG00000015449) NAAA (ENSBTAG00000019478) SDAD1 (ENSBTAG00000007639) CXCL9 (ENSBTAG00000050852) ART3 (ENSBTAG00000010954) CXCL10 (ENSBTAG00000001725) CXCL11 (ENSBTAG00000005603) NUP54 (ENSBTAG00000010955) SCARB2 (ENSBTAG00000010956) ENSBTAG00000053885 ENSBTAG00000004921 STBD1 (ENSBTAG00000010389) Hybrid Bos Indicus MODERN SPECIES 25 CXCL8 (ENSBIXG00005025908) ENSBIXG00005025852 CXCL6 (ENSBIXG00005025825) ENSBIXG00005005893 ENSBIXG00005025724 ENSBIXG00005025636 MTHFD2L (ENSBIXG00005025607) EPGN (ENSBIXG00005025481) EREG (ENSBIXG00005025352) AREG (ENSBIXG00005025328) BTC (ENSBIXG00005004302) PARM1 (ENSBIXG00005025268) RCHY1 (ENSBIXG00005025176) THAP6 (ENSBIXG00005024993) ODAPH (ENSBIXG00005024923) ENSBIXG00005024906 #22 CDKL2 (ENSBIXG00005004240) G3BP2 (ENSBIXG00005024751) ENSBIXG00005004190 USO1 (ENSBIXG00005024502) PPEF2 (ENSBIXG00005024385) NAAA (ENSBIXG00005004158) ENSBIXG00005024245 CXCL9 (ENSBIXG00005024192) ART3 (ENSBIXG00005024126) CXCL10 (ENSBIXG00005006677) CXCL11 (ENSBIXG00005023964) SCARB2 (ENSBIXG00005023859) ENSBIXG00005023711 CCDC158 (ENSBIXG00005023597) ENSBIXG00005004011 Bos_a ANCESTRAL SPECIES 21 ENSGT00940000162749 ENSGT00940000162559 ENSGT00940000163666 ENSGT00940000155233.bb.b.b ENSGT00940000163368 ENSGT00940000155233.bb.a ENSGT00940000160901 ENSGT00510000048556 ENSGT00510000048748 ENSGT00940000160696 ENSGT00940000160508 ENSGT00390000014545 ENSGT00390000008853 ENSGT00940000162692 ENSGT00390000005348 ENSGT00940000155104.q.b #22 ENSGT00940000160368 ENSGT00390000011365.b ENSGT00390000017018.b ENSGT00940000157870 ENSGT00530000063548.A ENSGT00390000010355 ENSGT00940000161751 ENSGT00940000161759 ENSGT00530000064263 ENSGT01030000234601.c.b.a ENSGT00390000013620.a ENSGT00940000153372.A.e.a.a ENSGT00940000162425 ENSGT00390000007731 ENSGT00390000013339 Wild yak MODERN SPECIES 2356 ENSBMUG00000017128 ODAPH (ENSBMUG00000017110) ENSBMUG00000017095 #22 CDKL2 (ENSBMUG00000017084) G3BP2 (ENSBMUG00000017057) USO1 (ENSBMUG00000017017) PPEF2 (ENSBMUG00000016959) NAAA (ENSBMUG00000016913) SDAD1 (ENSBMUG00000016860) CXCL9 (ENSBMUG00000016804) CXCL10 (ENSBMUG00000016790) Domestic yak MODERN SPECIES 25 ENSBGRG00000020336 ENSBGRG00000020322 CXCL6 (ENSBGRG00000020220) ENSBGRG00000020163 ENSBGRG00000019854 ENSBGRG00000019815 MTHFD2L (ENSBGRG00000019648) EPGN (ENSBGRG00000019518) EREG (ENSBGRG00000019471) AREG (ENSBGRG00000019294) BTC (ENSBGRG00000019197) PARM1 (ENSBGRG00000019090) RCHY1 (ENSBGRG00000018556) THAP6 (ENSBGRG00000018407) ODAPH (ENSBGRG00000018359) ENSBGRG00000018233 #22 CDKL2 (ENSBGRG00000018088) ENSBGRG00000018049 G3BP2 (ENSBGRG00000017795) USO1 (ENSBGRG00000017022) PPEF2 (ENSBGRG00000016818) NAAA (ENSBGRG00000016644) SDAD1 (ENSBGRG00000015906) CXCL9 (ENSBGRG00000015837) CXCL10 (ENSBGRG00000015786) CXCL11 (ENSBGRG00000015719) ART3 (ENSBGRG00000014983) NUP54 (ENSBGRG00000014836) ENSBGRG00000014820 SCARB2 (ENSBGRG00000014740) FAM47E (ENSBGRG00000014524) American bison MODERN SPECIES 3021 CXCL6 (ENSBBBG00000017224) PPBP (ENSBBBG00000004261) ENSBBBG00000017239 ENSBBBG00000017247 ENSBBBG00000004273 ENSBBBG00000017266 MTHFD2L (ENSBBBG00000017281) EPGN (ENSBBBG00000017336) EREG (ENSBBBG00000008931) AREG (ENSBBBG00000017367) BTC (ENSBBBG00000017380) PARM1 (ENSBBBG00000007577) ENSBBBG00000008602 THAP6 (ENSBBBG00000004316) ODAPH (ENSBBBG00000004321) ENSBBBG00000017475 #22 CDKL2 (ENSBBBG00000007268) G3BP2 (ENSBBBG00000004352) USO1 (ENSBBBG00000017656) PPEF2 (ENSBBBG00000017723) NAAA (ENSBBBG00000004382) SDAD1 (ENSBBBG00000017820) CXCL9 (ENSBBBG00000017829) CXCL10 (ENSBBBG00000007950) CXCL11 (ENSBBBG00000008603) ENSBBBG00000017857 ENSBBBG00000017862 ENSBBBG00000004403 SCARB2 (ENSBBBG00000018067) ENSBBBG00000018082 STBD1 (ENSBBBG00000018090) Yarkand deer MODERN SPECIES 29 CXCL6 (ENSCHYG00000002113) PPBP (ENSCHYG00000002134) ENSCHYG00000002148 ENSCHYG00000002180 ENSCHYG00000002199 ENSCHYG00000002206 MTHFD2L (ENSCHYG00000002226) EPGN (ENSCHYG00000002264) EREG (ENSCHYG00000002301) AREG (ENSCHYG00000002308) BTC (ENSCHYG00000002331) PARM1 (ENSCHYG00000002352) RCHY1 (ENSCHYG00000002396) THAP6 (ENSCHYG00000002523) ODAPH (ENSCHYG00000002541) ENSCHYG00000002546 #22 CDKL2 (ENSCHYG00000002564) G3BP2 (ENSCHYG00000002607) USO1 (ENSCHYG00000002656) PPEF2 (ENSCHYG00000002796) NAAA (ENSCHYG00000002828) SDAD1 (ENSCHYG00000002887) CXCL9 (ENSCHYG00000003003) CXCL10 (ENSCHYG00000003012) CXCL11 (ENSCHYG00000003024) ART3 (ENSCHYG00000003055) NUP54 (ENSCHYG00000003162) SCARB2 (ENSCHYG00000003217) FAM47E (ENSCHYG00000003357) STBD1 (ENSCHYG00000003378) ENSCHYG00000003398 Suina ANCESTRAL SPECIES ENSGT00940000155104.q.b #22 Chacoan peccary MODERN SPECIES 808 SERINC2 (ENSCWAG00000016891) #21 ENSCWAG00000016856 #22 ZCCHC17 (ENSCWAG00000016769) #23 SNRNP40 (ENSCWAG00000016660) #24 NKAIN1 (ENSCWAG00000016631) #25 PUM1 (ENSCWAG00000016294) #26 SDC3 (ENSCWAG00000016221) #27 LAPTM5 (ENSCWAG00000016188) #28 MATN1 (ENSCWAG00000016130) #29 PTPRU (ENSCWAG00000016058) #30 MECR (ENSCWAG00000016005) #31 SRSF4 (ENSCWAG00000015977) #32 TMEM200B (ENSCWAG00000015967) #33 EPB41 (ENSCWAG00000007295) #34 OPRD1 (ENSCWAG00000007029) #35 YTHDF2 (ENSCWAG00000007018) #36 GMEB1 (ENSCWAG00000006958) #37 Artiodactyla ANCESTRAL SPECIES ENSGT00940000155104.r #22 Suina ANCESTRAL SPECIES ENSGT00940000155104.r #22 Pig MODERN SPECIES 1 ENSSSCG00000053351 ENSSSCG00000010952 ENSSSCG00000055078 ENSSSCG00000063532 GAS1 (ENSSSCG00000056862) ENSSSCG00000044562 DAPK1 (ENSSSCG00000010949) CTSL (ENSSSCG00000010948) FBP2 (ENSSSCG00000010947) FBP1 (ENSSSCG00000031174) ENSSSCG00000010943 FANCC (ENSSSCG00000033654) PTCH1 (ENSSSCG00000027312) ERCC6L2 (ENSSSCG00000010941) HSD17B3 (ENSSSCG00000010937) ENSSSCG00000010936 #22 SLC35D2 (ENSSSCG00000039368) ZNF367 (ENSSSCG00000028981) ENSSSCG00000039643 HABP4 (ENSSSCG00000035956) ENSSSCG00000027557 PRXL2C (ENSSSCG00000011169) ZNF510 (ENSSSCG00000011168) ZNF782 (ENSSSCG00000011167) ENSSSCG00000031186 CTSV (ENSSSCG00000011171) FAM240B (ENSSSCG00000032993) CYB5R1 (ENSSSCG00000010929) ADIPOR1 (ENSSSCG00000010931) ENSSSCG00000034258 KLHL12 (ENSSSCG00000022787) Chacoan peccary MODERN SPECIES 104 ENSCWAG00000014446 PSMC4 (ENSCWAG00000014489) ENSCWAG00000014583 FBL (ENSCWAG00000014924) DYRK1B (ENSCWAG00000014960) CLC (ENSCWAG00000015077) EID2 (ENSCWAG00000015148) ENSCWAG00000015158 #22 DLL3 (ENSCWAG00000015192) TIMM50 (ENSCWAG00000015276) SUPT5H (ENSCWAG00000015358) ENSCWAG00000015528 ENSCWAG00000015564 PLEKHG2 (ENSCWAG00000015656) ZFP36 (ENSCWAG00000015894) MED29 (ENSCWAG00000015904) PAF1 (ENSCWAG00000015941) SAMD4B (ENSCWAG00000016071) GMFG (ENSCWAG00000016145) LRFN1 (ENSCWAG00000016323) ENSCWAG00000016366 ENSCWAG00000016418 ENSCWAG00000016462 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000155104.r #22 Camelidae ANCESTRAL SPECIES 3 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.r #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.f #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00950000185227 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 Arabian camel MODERN SPECIES 4 DCDC2B (ENSCDRG00005020450) IQCC (ENSCDRG00005020440) CCDC28B (ENSCDRG00005020426) #7 TXLNA (ENSCDRG00005020412) #8 KPNA6 (ENSCDRG00005020401) #9 TMEM39B (ENSCDRG00005020379) #10 KHDRBS1 (ENSCDRG00005020356) #11 PTP4A2 (ENSCDRG00005020308) #12 ENSCDRG00005020288 #13 ADGRB2 (ENSCDRG00005017991) #14 COL16A1 (ENSCDRG00005017669) PEF1 (ENSCDRG00005017625) #17 HCRTR1 (ENSCDRG00005017596) #18 TINAGL1 (ENSCDRG00005017474) #19 SERINC2 (ENSCDRG00005016957) #21 FABP3 (ENSCDRG00005016894) #22 ZCCHC17 (ENSCDRG00005016796) #23 SNRNP40 (ENSCDRG00005016675) #24 NKAIN1 (ENSCDRG00005016643) #25 PUM1 (ENSCDRG00005015603) #26 SDC3 (ENSCDRG00005015511) #27 LAPTM5 (ENSCDRG00005015458) #28 MATN1 (ENSCDRG00005015422) #29 PTPRU (ENSCDRG00005015095) #30 MECR (ENSCDRG00005014978) #31 ENSCDRG00005014957 SRSF4 (ENSCDRG00005014921) #32 TMEM200B (ENSCDRG00005014903) #33 EPB41 (ENSCDRG00005007158) #34 OPRD1 (ENSCDRG00005006966) #35 YTHDF2 (ENSCDRG00005006917) #36 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000155104.r #22 Cetacea ANCESTRAL SPECIES ENSGT00940000155104.r #22 Odontoceti ANCESTRAL SPECIES ENSGT00940000155104.r #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000155104.r #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155104.r #22 Vaquita MODERN SPECIES CCDC28B (ENSPSNG00000011624) #7 TXLNA (ENSPSNG00000011587) #8 KPNA6 (ENSPSNG00000011526) #9 KHDRBS1 (ENSPSNG00000011403) #11 ENSPSNG00000011229 #12 ENSPSNG00000011074 #13 ADGRB2 (ENSPSNG00000009546) #14 COL16A1 (ENSPSNG00000008940) PEF1 (ENSPSNG00000008855) #17 HCRTR1 (ENSPSNG00000008808) #18 TINAGL1 (ENSPSNG00000008736) #19 ENSPSNG00000008678 ENSPSNG00000008655 SERINC2 (ENSPSNG00000008544) #21 ENSPSNG00000008491 FABP3 (ENSPSNG00000008448) #22 ZCCHC17 (ENSPSNG00000008363) #23 SNRNP40 (ENSPSNG00000008336) #24 NKAIN1 (ENSPSNG00000008300) #25 PUM1 (ENSPSNG00000007980) #26 SDC3 (ENSPSNG00000007871) #27 LAPTM5 (ENSPSNG00000007821) #28 MATN1 (ENSPSNG00000007748) #29 ENSPSNG00000007731 PTPRU (ENSPSNG00000007606) #30 MECR (ENSPSNG00000007523) #31 SRSF4 (ENSPSNG00000007490) #32 TMEM200B (ENSPSNG00000007470) #33 EPB41 (ENSPSNG00000006874) #34 OPRD1 (ENSPSNG00000006621) #35 ENSPSNG00000006599 Eulipotyphla ANCESTRAL SPECIES 2121 ENSGT00940000155104 #22 ENSGT00510000047363 #23 Common shrew MODERN SPECIES 12155 FABP3 (ENSSARG00000013720) #22 Hedgehog MODERN SPECIES 2207 FABP3 (ENSEEUG00000014876) #22 ZCCHC17 (ENSEEUG00000014855) #23 Atlantogenata ANCESTRAL SPECIES 4 ENSGT00940000161946 ENSGT00390000017195 ENSGT00500000044870.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Xenarthra ANCESTRAL SPECIES 561 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 Sloth MODERN SPECIES 1916 FABP3 (ENSCHOG00000001585) #22 ZCCHC17 (ENSCHOG00000001581) #23 Armadillo MODERN SPECIES 2273 SERINC2 (ENSDNOG00000014636) #21 FABP3 (ENSDNOG00000045861) #22 ENSDNOG00000000509 #23 SNRNP40 (ENSDNOG00000005077) #24 NKAIN1 (ENSDNOG00000043368) #25 PUM1 (ENSDNOG00000010939) #26 SDC3 (ENSDNOG00000039142) #27 LAPTM5 (ENSDNOG00000048917) #28 MATN1 (ENSDNOG00000042938) #29 Afrotheria ANCESTRAL SPECIES 15 ENSGT00940000162781 ENSGT00390000017195 ENSGT00500000044870.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Tenrec MODERN SPECIES 9100 FABP3 (ENSETEG00000007424) #22 ZCCHC17 (ENSETEG00000007421) #23 Afrotheria_a ANCESTRAL SPECIES 15 ENSGT00940000162781 ENSGT00390000017195 ENSGT00500000044870.b #7 ENSGT00940000158303 #8 ENSGT01050000244950.a.b #9 ENSGT00390000018895.b #10 ENSGT00940000155718 #11 ENSGT00940000154383 #12 ENSGT00940000162194 #13 ENSGT00940000160103 #14 ENSGT00940000161782 ENSGT00940000155722 #17 ENSGT01070000253744.a.a.b.a #18 ENSGT00940000160023 #19 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Hyrax MODERN SPECIES 1714 FABP3 (ENSPCAG00000011730) #22 ZCCHC17 (ENSPCAG00000011665) #23 Elephant MODERN SPECIES 332 EIF3I (ENSLAFG00000017026) TMEM234 (ENSLAFG00000017021) IQCC (ENSLAFG00000017012) CCDC28B (ENSLAFG00000027188) #7 TXLNA (ENSLAFG00000014937) #8 KPNA6 (ENSLAFG00000017005) #9 TMEM39B (ENSLAFG00000009415) #10 KHDRBS1 (ENSLAFG00000009414) #11 PTP4A2 (ENSLAFG00000008462) #12 ENSLAFG00000003350 #13 COL16A1 (ENSLAFG00000003775) PEF1 (ENSLAFG00000010012) #17 HCRTR1 (ENSLAFG00000010009) #18 TINAGL1 (ENSLAFG00000010005) #19 SERINC2 (ENSLAFG00000005871) #21 FABP3 (ENSLAFG00000022206) #22 ZCCHC17 (ENSLAFG00000015364) #23 SNRNP40 (ENSLAFG00000013976) #24 NKAIN1 (ENSLAFG00000017512) #25 PUM1 (ENSLAFG00000003178) #26 SDC3 (ENSLAFG00000013200) #27 LAPTM5 (ENSLAFG00000029640) #28 MATN1 (ENSLAFG00000012878) #29 ENSLAFG00000032386 PTPRU (ENSLAFG00000010090) #30 MECR (ENSLAFG00000002576) #31 SRSF4 (ENSLAFG00000002575) #32 TMEM200B (ENSLAFG00000031258) #33 EPB41 (ENSLAFG00000002571) #34 OPRD1 (ENSLAFG00000017219) #35 YTHDF2 (ENSLAFG00000030451) #36 Marsupialia ANCESTRAL SPECIES 10 ENSGT00940000158624 ENSGT00940000158725 ENSGT00390000003084 ENSGT00940000154169.B ENSGT00390000006113 ENSGT00940000160531 ENSGT00940000156792 ENSGT00940000160928 ENSGT01090000260044.A.a.b.a.b ENSGT01090000260044.A.a.b.a.a.a.b ENSGT00940000161580.a ENSGT00940000160840 ENSGT00940000156275 ENSGT00940000158433 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Opossum MODERN SPECIES 3 SVBP (ENSMODG00000039243) ERMAP (ENSMODG00000017153) SLC2A1 (ENSMODG00000017148) ENSMODG00000017141 ENSMODG00000050145 ENSMODG00000037229 ENSMODG00000023292 ENSMODG00000051065 ENSMODG00000017132 ZSCAN20 (ENSMODG00000017129) ENSMODG00000043984 PHC2 (ENSMODG00000017114) ZNF362 (ENSMODG00000017096) TRIM62 (ENSMODG00000017094) SERINC2 (ENSMODG00000017090) #21 ENSMODG00000017087 #22 ENSMODG00000017082 #23 SNRNP40 (ENSMODG00000017078) #24 ENSMODG00000040372 ENSMODG00000017074 #25 PUM1 (ENSMODG00000017067) #26 SDC3 (ENSMODG00000017056) #27 LAPTM5 (ENSMODG00000017054) #28 MATN1 (ENSMODG00000017050) #29 ENSMODG00000000992 SPSB1 (ENSMODG00000009234) H6PD (ENSMODG00000009247) GPR157 (ENSMODG00000009254) ENSMODG00000009329 ENSMODG00000050951 SLC2A7 (ENSMODG00000023285) Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000158624 ENSGT00940000158725 ENSGT00390000003084 ENSGT00390000006113 ENSGT00940000160531 ENSGT00940000156792 ENSGT00940000160928 ENSGT01090000260044.A.a.b.a.b ENSGT01090000260044.A.a.b.a.a.a.b ENSGT00940000161580.b ENSGT00940000161580.a ENSGT00940000160840 ENSGT00940000156275 ENSGT00940000158433 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000024511 ENSSHAG00000028636 ENSSHAG00000025510 ENSSHAG00000025392 ENSSHAG00000002107 ENSSHAG00000020871 ENSSHAG00000031166 ENSSHAG00000030601 ENSSHAG00000004699 ENSSHAG00000005539 ENSSHAG00000006099 ENSSHAG00000002109 ENSSHAG00000031403 ENSSHAG00000006975 ENSSHAG00000028124 #21 ENSSHAG00000008651 #22 ZCCHC17 (ENSSHAG00000020544) #23 SNRNP40 (ENSSHAG00000027894) #24 PUM1 (ENSSHAG00000010918) #26 SDC3 (ENSSHAG00000028518) #27 LAPTM5 (ENSSHAG00000013255) #28 ENSSHAG00000031333 PTPRU (ENSSHAG00000017352) #30 SRSF4 (ENSSHAG00000024879) #32 TMEM200B (ENSSHAG00000025196) #33 EPB41 (ENSSHAG00000011604) #34 OPRD1 (ENSSHAG00000024576) #35 YTHDF2 (ENSSHAG00000009502) #36 GMEB1 (ENSSHAG00000009099) #37 TAF12 (ENSSHAG00000008563) ENSSHAG00000030345 Diprotodontia ANCESTRAL SPECIES 3 ENSGT00940000158624 ENSGT00940000158725 ENSGT00390000003084 ENSGT00390000006113 ENSGT00940000160531 ENSGT00940000156792 ENSGT00940000160928 ENSGT01090000260044.A.a.b.a.b ENSGT01090000260044.A.a.b.a.a.a.b ENSGT00940000161580.b ENSGT00940000161580.a ENSGT00940000160840 ENSGT00940000156275 ENSGT00940000158433 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 Wallaby MODERN SPECIES 2984 ENSMEUG00000012501 #22 Diprotodontia_a DUPLICATION Diprotodontia_a DUPLICATION Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000155104.rb.a #22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1043 MIEF2 (ENSVURG00010010325) TOP3A (ENSVURG00010010334) SMCR8 (ENSVURG00010010376) SHMT1 (ENSVURG00010010383) ENSVURG00010010392 TMED7 (ENSVURG00010010397) CDO1 (ENSVURG00010010405) ATG12 (ENSVURG00010010412) AP3S1 (ENSVURG00010010420) LVRN (ENSVURG00010010448) ARL14EPL (ENSVURG00010010501) COMMD10 (ENSVURG00010010528) ENSVURG00010010548 SEMA6A (ENSVURG00010010569) ENSVURG00010010599 ENSVURG00010010642 #22 ENSVURG00010010654 DTWD2 (ENSVURG00010010691) DMXL1 (ENSVURG00010010777) TNFAIP8 (ENSVURG00010011274) HSD17B4 (ENSVURG00010011297) PRR16 (ENSVURG00010011319) ENSVURG00010011332 SRFBP1 (ENSVURG00010011339) LOX (ENSVURG00010011351) ENSVURG00010011370 SNCAIP (ENSVURG00010011390) SNX2 (ENSVURG00010011441) SNX24 (ENSVURG00010011487) PPIC (ENSVURG00010011501) PRDM6 (ENSVURG00010011514) Common wonbat MODERN SPECIES 1017 TTC7A (ENSVURG00010015349) STPG4 (ENSVURG00010015336) ENSVURG00010015322 EPCAM (ENSVURG00010015305) MSH2 (ENSVURG00010015285) KCNK12 (ENSVURG00010015272) MSH6 (ENSVURG00010015249) FBXO11 (ENSVURG00010015131) FOXN2 (ENSVURG00010015092) PPP1R21 (ENSVURG00010015035) STON1 (ENSVURG00010015010) GTF2A1L (ENSVURG00010014973) LHCGR (ENSVURG00010014953) FSHR (ENSVURG00010014932) ENSVURG00010014912 ENSVURG00010014902 #22 ENSVURG00010014807 ENSVURG00010014760 ENSVURG00010014727 ENSVURG00010014704 CHAC2 (ENSVURG00010014690) ASB3 (ENSVURG00010014669) ERLEC1 (ENSVURG00010014651) GPR75 (ENSVURG00010014637) PSME4 (ENSVURG00010014522) ENSVURG00010014502 ENSVURG00010014481 ENSVURG00010014468 SPTBN1 (ENSVURG00010014369) EML6 (ENSVURG00010014289) ENSVURG00010014197 koala MODERN SPECIES 130 ENSPCIG00000026500 #22 RORB (ENSPCIG00000028184) ENSPCIG00000030720 TRPM6 (ENSPCIG00000000057) ENSPCIG00000003968 CARNMT1 (ENSPCIG00000003974) NMRK1 (ENSPCIG00000019565) OSTF1 (ENSPCIG00000009252) ENSPCIG00000004091 ENSPCIG00000015817 GABBR2 (ENSPCIG00000015833) ENSPCIG00000015897 ENSPCIG00000015899 ENSPCIG00000015901 PRSS8 (ENSPCIG00000015904) KAT8 (ENSPCIG00000015907) Diprotodontia_a ANCESTRAL SPECIES 4 ENSGT00940000158725 ENSGT00390000003084 ENSGT00390000006113 ENSGT00940000160531 ENSGT00940000156792 ENSGT00940000160928 ENSGT01090000260044.A.a.b.a.b.n ENSGT01090000260044.A.a.b.a.b.m ENSGT01090000260044.A.a.b.a.a.a.b ENSGT00940000161580.b ENSGT00940000161580.a ENSGT00940000160840 ENSGT00940000156275 ENSGT00940000158433 ENSGT01030000234623.a.a.b #21 ENSGT00940000155104.rb.b #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000157669 #35 ENSGT00940000156761 #36 ENSGT00410000025596.a.b #37 koala DUPLICATION koala MODERN SPECIES 14 P3H1 (ENSPCIG00000009135) C1orf50 (ENSPCIG00000034770) SVBP (ENSPCIG00000028099) ENSPCIG00000000100 SLC2A1 (ENSPCIG00000000549) ENSPCIG00000027297 ENSPCIG00000003019 ENSPCIG00000005434 ENSPCIG00000034316 ENSPCIG00000014108 ENSPCIG00000014116 PHC2 (ENSPCIG00000014123) ZNF362 (ENSPCIG00000014128) TRIM62 (ENSPCIG00000014133) SERINC2 (ENSPCIG00000014138) #21 ENSPCIG00000034380 #22 ZCCHC17 (ENSPCIG00000014143) #23 SNRNP40 (ENSPCIG00000014145) #24 NKAIN1 (ENSPCIG00000014146) #25 PUM1 (ENSPCIG00000014151) #26 SDC3 (ENSPCIG00000014180) #27 LAPTM5 (ENSPCIG00000014169) #28 MATN1 (ENSPCIG00000017737) #29 ENSPCIG00000022449 PTPRU (ENSPCIG00000022440) #30 MECR (ENSPCIG00000022434) #31 ENSPCIG00000022430 TMEM200B (ENSPCIG00000022428) #33 EPB41 (ENSPCIG00000022421) #34 OPRD1 (ENSPCIG00000022418) #35 YTHDF2 (ENSPCIG00000022413) #36 koala MODERN SPECIES 223 USP35 (ENSPCIG00000011926) GAB2 (ENSPCIG00000011923) NARS2 (ENSPCIG00000004095) TENM4 (ENSPCIG00000001624) ENSPCIG00000015038 #22 ENSPCIG00000026467 Common wonbat MODERN SPECIES 1014 ENSVURG00010019578 PPIH (ENSVURG00010019557) ENSVURG00010019550 ENSVURG00010019501 ENSVURG00010019486 ENSVURG00010019479 ENSVURG00010019470 ENSVURG00010019459 ENSVURG00010019452 ENSVURG00010019447 ENSVURG00010019442 PHC2 (ENSVURG00010019423) ZNF362 (ENSVURG00010019416) TRIM62 (ENSVURG00010019411) SERINC2 (ENSVURG00010019394) #21 ENSVURG00010019386 #22 ZCCHC17 (ENSVURG00010019375) #23 SNRNP40 (ENSVURG00010019367) #24 NKAIN1 (ENSVURG00010019360) #25 PUM1 (ENSVURG00010019299) #26 SDC3 (ENSVURG00010019281) #27 ENSVURG00010019274 LAPTM5 (ENSVURG00010019267) #28 MATN1 (ENSVURG00010019256) #29 ENSVURG00010019248 PTPRU (ENSVURG00010019212) #30 MECR (ENSVURG00010019183) #31 SRSF4 (ENSVURG00010019175) #32 TMEM200B (ENSVURG00010019172) #33 EPB41 (ENSVURG00010019138) #34 OPRD1 (ENSVURG00010019102) #35 Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000155104.sb #22 koala MODERN SPECIES 5 MARVELD2 (ENSPCIG00000033113) RAD17 (ENSPCIG00000024704) ENSPCIG00000034861 CCDC125 (ENSPCIG00000005071) ENSPCIG00000013227 FAM151B (ENSPCIG00000013226) ENSPCIG00000032886 ENSPCIG00000013220 ENSPCIG00000013221 #22 MSH3 (ENSPCIG00000013216) RASGRF2 (ENSPCIG00000013213) CKMT2 (ENSPCIG00000013210) ZCCHC9 (ENSPCIG00000013208) ACOT12 (ENSPCIG00000013207) SSBP2 (ENSPCIG00000013205) ATG10 (ENSPCIG00000029907) ENSPCIG00000029909 RPS23 (ENSPCIG00000029904) ENSPCIG00000029902 ENSPCIG00000029901 ENSPCIG00000029899 ENSPCIG00000029898 ENSPCIG00000032700 XRCC4 (ENSPCIG00000029896) Platypus MODERN SPECIES 7 ENSOANG00000039990 ENSOANG00000051074 ENSOANG00000037029 SCMH1 (ENSOANG00000002846) ENSOANG00000040254 FABP3 (ENSOANG00000045885) #22 SERINC2 (ENSOANG00000048218) #21 SNRNP40 (ENSOANG00000011686) #24 PUM1 (ENSOANG00000004902) #26 SDC3 (ENSOANG00000038243) #27 ENSOANG00000012233 #28 MATN1 (ENSOANG00000006352) #29 PTPRU (ENSOANG00000000977) #30 MECR (ENSOANG00000003563) #31 ENSOANG00000046267 SRSF4 (ENSOANG00000015169) #32 ENSOANG00000042533 #33 EPB41 (ENSOANG00000003830) #34 ENSOANG00000003829 RPA2 (ENSOANG00000003828) SMPDL3B (ENSOANG00000011249) Sauria ANCESTRAL SPECIES 23 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000154347.b.b ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 Archelosauria ANCESTRAL SPECIES 25 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000154347.b.b ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 Cryptodira ANCESTRAL SPECIES 50 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000154347.b.b ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a Testudinoidea ANCESTRAL SPECIES 12 ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT00950000183010.a.a.a.a.a.a ENSGT00950000185703 ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213.l #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Emydidae ANCESTRAL SPECIES 8 ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT00950000183010.a.a.a.a.a.a ENSGT00950000185703 ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213.l #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Three-toed box turtle MODERN SPECIES 111 RPA2 (ENSTMTG00000004049) THEMIS2 (ENSTMTG00000004070) PPP1R8 (ENSTMTG00000004082) STX12 (ENSTMTG00000004113) CITED4 (ENSTMTG00000004137) CTPS1 (ENSTMTG00000004156) SLFNL1 (ENSTMTG00000004197) SCMH1 (ENSTMTG00000004250) FOXO6 (ENSTMTG00000004359) EDN2 (ENSTMTG00000004374) HIVEP3 (ENSTMTG00000004389) ENSTMTG00000004422 SERINC2 (ENSTMTG00000004444) #21 ENSTMTG00000004467 ENSTMTG00000004482 FABP3 (ENSTMTG00000004503) #22 ZCCHC17 (ENSTMTG00000004522) #23 SNRNP40 (ENSTMTG00000004552) #24 NKAIN1 (ENSTMTG00000004582) #25 PUM1 (ENSTMTG00000004615) #26 SDC3 (ENSTMTG00000004720) #27 LAPTM5 (ENSTMTG00000004850) #28 MATN1 (ENSTMTG00000004875) #29 PTPRU (ENSTMTG00000005283) #30 MECR (ENSTMTG00000009571) #31 ENSTMTG00000009603 #32 ENSTMTG00000009632 #32 ENSTMTG00000009650 TMEM200B (ENSTMTG00000009699) #33 EPB41 (ENSTMTG00000009904) #34 ENSTMTG00000011472 painted turtle MODERN SPECIES 2010 ENSCPBG00000002934 #22 Testudinidae ANCESTRAL SPECIES 63 ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT00950000183010.a.a.a.a.a.a ENSGT00950000185703 ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000158102.f ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 Goode s thornscrub tortoise MODERN SPECIES 12 RPA2 (ENSGEVG00005012601) THEMIS2 (ENSGEVG00005012576) PPP1R8 (ENSGEVG00005012540) STX12 (ENSGEVG00005012511) CITED4 (ENSGEVG00005012494) CTPS1 (ENSGEVG00005012454) SLFNL1 (ENSGEVG00005012193) SCMH1 (ENSGEVG00005012060) FOXO6 (ENSGEVG00005011996) EDN2 (ENSGEVG00005011954) HIVEP3 (ENSGEVG00005011926) ENSGEVG00005011841 ENSGEVG00005011799 SERINC2 (ENSGEVG00005011239) #21 ENSGEVG00005011122 FABP3 (ENSGEVG00005011101) #22 ZCCHC17 (ENSGEVG00005011062) #23 SNRNP40 (ENSGEVG00005011017) #24 ENSGEVG00005010885 NKAIN1 (ENSGEVG00005010814) #25 PUM1 (ENSGEVG00005010741) #26 ENSGEVG00005010702 SDC3 (ENSGEVG00005010583) #27 LAPTM5 (ENSGEVG00005010532) #28 MATN1 (ENSGEVG00005010444) #29 ENSGEVG00005010431 ENSGEVG00005010403 PTPRU (ENSGEVG00005006991) #30 MECR (ENSGEVG00005006427) #31 ENSGEVG00005006402 ENSGEVG00005006388 Chinese turtle MODERN SPECIES 1399 ENSPSIG00000000091 FABP3 (ENSPSIG00000007657) #22 ZCCHC17 (ENSPSIG00000007187) #23 SNRNP40 (ENSPSIG00000017063) #24 Archosauria ANCESTRAL SPECIES 22 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 ENSGT00940000155019.a.a Aves ANCESTRAL SPECIES 28 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 ENSGT00940000155019.a.a African ostrich MODERN SPECIES 142 FABP3 (ENSSCUG00000002406) #22 ZCCHC17 (ENSSCUG00000002403) #23 SNRNP40 (ENSSCUG00000002400) #24 PUM1 (ENSSCUG00000002393) #26 SDC3 (ENSSCUG00000002391) #27 LAPTM5 (ENSSCUG00000002386) #28 MATN1 (ENSSCUG00000002385) #29 PTPRU (ENSSCUG00000002334) #30 Neognathae ANCESTRAL SPECIES 26 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 ENSGT00940000155019.a.a Neognathae_b ANCESTRAL SPECIES 26 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Neognathae_c ANCESTRAL SPECIES 10 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Golden eagle MODERN SPECIES 7 ENSACCG00020009781 ENSACCG00020009763 RPA2 (ENSACCG00020009745) ENSACCG00020009729 PPP1R8 (ENSACCG00020009704) STX12 (ENSACCG00020009690) CITED4 (ENSACCG00020009679) CTPS1 (ENSACCG00020009651) SCMH1 (ENSACCG00020009587) FOXO6 (ENSACCG00020009522) EDN2 (ENSACCG00020009507) HIVEP3 (ENSACCG00020009487) ENSACCG00020009470 SERINC2 (ENSACCG00020009449) #21 ENSACCG00020009438 FABP3 (ENSACCG00020009430) #22 ZCCHC17 (ENSACCG00020009424) #23 SNRNP40 (ENSACCG00020009409) #24 NKAIN1 (ENSACCG00020009395) #25 PUM1 (ENSACCG00020009346) #26 SDC3 (ENSACCG00020009333) #27 LAPTM5 (ENSACCG00020009319) #28 MATN1 (ENSACCG00020009307) #29 PTPRU (ENSACCG00020009245) #30 MECR (ENSACCG00020009188) #31 ENSACCG00020009169 ENSACCG00020009155 SRSF4 (ENSACCG00020009138) #32 ENSACCG00020009092 TMEM200B (ENSACCG00020009062) #33 EPB41 (ENSACCG00020009007) #34 Kakapo MODERN SPECIES 6 ZBTB8A (ENSSHBG00005018893) ZBTB8B (ENSSHBG00005018899) BSDC1 (ENSSHBG00005018904) TSSK3 (ENSSHBG00005018909) ENSSHBG00005018915 KPNA6 (ENSSHBG00005018920) #9 TXLNA (ENSSHBG00005018924) #8 ENSSHBG00005018931 DCDC2B (ENSSHBG00005018936) CTPS1 (ENSSHBG00005018939) SCMH1 (ENSSHBG00005018952) FOXO6 (ENSSHBG00005000877) EDN2 (ENSSHBG00005005376) HIVEP3 (ENSSHBG00005005416) SERINC2 (ENSSHBG00005005445) #21 FABP3 (ENSSHBG00005005482) #22 ZCCHC17 (ENSSHBG00005005494) #23 SNRNP40 (ENSSHBG00005005515) #24 ENSSHBG00005005542 PUM1 (ENSSHBG00005005610) #26 SDC3 (ENSSHBG00005005657) #27 LAPTM5 (ENSSHBG00005005742) #28 MATN1 (ENSSHBG00005005761) #29 PTPRU (ENSSHBG00005006697) #30 MECR (ENSSHBG00005016650) #31 SRSF4 (ENSSHBG00005016655) #32 ENSSHBG00005016658 TMEM200B (ENSSHBG00005016664) #33 EPB41 (ENSSHBG00005016690) #34 ENSSHBG00005016738 HNRNPR (ENSSHBG00005016741) Passeriformes ANCESTRAL SPECIES 23 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00390000010045 ENSGT00950000183182.a.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT01030000237089 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Great tit MODERN SPECIES 15 RPA2 (ENSPMJG00000007097) SMPDL3B (ENSPMJG00000007106) PPP1R8 (ENSPMJG00000007111) STX12 (ENSPMJG00000007115) CITED4 (ENSPMJG00000007118) CTPS1 (ENSPMJG00000007127) SCMH1 (ENSPMJG00000007136) FOXO6 (ENSPMJG00000007153) ENSPMJG00000007156 ENSPMJG00000007158 ENSPMJG00000007160 EDN2 (ENSPMJG00000007167) HIVEP3 (ENSPMJG00000007179) ENSPMJG00000007182 SERINC2 (ENSPMJG00000007183) #21 FABP3 (ENSPMJG00000007187) #22 ENSPMJG00000007188 #23 ENSPMJG00000007189 NKAIN1 (ENSPMJG00000007190) #25 ENSPMJG00000007191 ENSPMJG00000007192 ENSPMJG00000007197 SDC3 (ENSPMJG00000007220) #27 ENSPMJG00000007221 PTPRU (ENSPMJG00000007228) #30 MECR (ENSPMJG00000007239) #31 SRSF4 (ENSPMJG00000007241) #32 ENSPMJG00000007242 TMEM200B (ENSPMJG00000007251) #33 EPB41 (ENSPMJG00000007254) #34 ENSPMJG00000007275 Passeriformes_d ANCESTRAL SPECIES 23 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00390000010045 ENSGT00950000183182.a.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401.j ENSGT01030000237089 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Flycatcher MODERN SPECIES 15 ENSFALG00000001127 ENSFALG00000026558 ENSFALG00000025447 CITED4 (ENSFALG00000014287) CTPS1 (ENSFALG00000001132) SCMH1 (ENSFALG00000001135) FOXO6 (ENSFALG00000001139) ENSFALG00000026814 EDN2 (ENSFALG00000023558) ENSFALG00000024276 HIVEP3 (ENSFALG00000001148) ENSFALG00000024170 ENSFALG00000023933 SERINC2 (ENSFALG00000001160) #21 ENSFALG00000027720 FABP3 (ENSFALG00000027224) #22 ZCCHC17 (ENSFALG00000001165) #23 ENSFALG00000001180 #24 SNRNP40 (ENSFALG00000026374) #24 NKAIN1 (ENSFALG00000001192) #25 PUM1 (ENSFALG00000001214) #26 ENSFALG00000027787 SDC3 (ENSFALG00000001253) #27 ENSFALG00000023518 LAPTM5 (ENSFALG00000001256) #28 MATN1 (ENSFALG00000023781) #29 ENSFALG00000026946 ENSFALG00000025415 PTPRU (ENSFALG00000001290) #30 MECR (ENSFALG00000001341) #31 SRSF4 (ENSFALG00000001346) #32 Passeriformes_g ANCESTRAL SPECIES 43 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00390000010045 ENSGT00950000183182.a.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401.j ENSGT01030000237089 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Medium ground finch MODERN SPECIES 131 ENSGFOG00000011097 ENSGFOG00000011092 ENSGFOG00000011086 HIVEP3 (ENSGFOG00000011079) ENSGFOG00000011067 ENSGFOG00000011063 SERINC2 (ENSGFOG00000011057) #21 FABP3 (ENSGFOG00000011047) #22 ZCCHC17 (ENSGFOG00000011042) #23 SNRNP40 (ENSGFOG00000011032) #24 NKAIN1 (ENSGFOG00000011018) #25 PUM1 (ENSGFOG00000010869) #26 ENSGFOG00000010825 #27 ENSGFOG00000010810 MATN1 (ENSGFOG00000010763) #29 PTPRU (ENSGFOG00000010192) #30 MECR (ENSGFOG00000010152) #31 ENSGFOG00000010147 SRSF4 (ENSGFOG00000010026) #32 ENSGFOG00000009992 TMEM200B (ENSGFOG00000009968) #33 EPB41 (ENSGFOG00000009863) #34 ENSGFOG00000009787 Passeroidea ANCESTRAL SPECIES 44 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00390000010045 ENSGT00950000183182.a.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401.j ENSGT01030000237089 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab Common canary MODERN SPECIES 49 CTPS1 (ENSSCAG00000014736) SCMH1 (ENSSCAG00000014716) ENSSCAG00000014707 FOXO6 (ENSSCAG00000014703) ENSSCAG00000014700 ENSSCAG00000014696 HIVEP3 (ENSSCAG00000014690) ENSSCAG00000014687 ENSSCAG00000014683 ENSSCAG00000014675 ENSSCAG00000014673 ENSSCAG00000014670 ENSSCAG00000014664 SERINC2 (ENSSCAG00000014661) #21 ENSSCAG00000014658 FABP3 (ENSSCAG00000014655) #22 ZCCHC17 (ENSSCAG00000014651) #23 SNRNP40 (ENSSCAG00000014646) #24 PUM1 (ENSSCAG00000014631) #26 SDC3 (ENSSCAG00000014620) #27 MATN1 (ENSSCAG00000014613) #29 ENSSCAG00000014609 TRNAU1AP (ENSSCAG00000014604) EPB41 (ENSSCAG00000014593) #34 TMEM200B (ENSSCAG00000014589) #33 ENSSCAG00000014579 ENSSCAG00000014571 MECR (ENSSCAG00000014567) #31 PTPRU (ENSSCAG00000013528) #30 RAB42 (ENSSCAG00000013064) ENSSCAG00000013058 Zebra finch MODERN SPECIES 16 PPP1R8 (ENSTGUG00000000851) STX12 (ENSTGUG00000000844) CITED4 (ENSTGUG00000000843) CTPS1 (ENSTGUG00000000831) SCMH1 (ENSTGUG00000000823) FOXO6 (ENSTGUG00000019479) ENSTGUG00000021166 ENSTGUG00000028799 ENSTGUG00000024101 EDN2 (ENSTGUG00000022016) HIVEP3 (ENSTGUG00000021215) ENSTGUG00000019007 ENSTGUG00000021754 SERINC2 (ENSTGUG00000014321) #21 ENSTGUG00000019512 ENSTGUG00000029247 #22 ZCCHC17 (ENSTGUG00000000817) #23 SNRNP40 (ENSTGUG00000000812) #24 NKAIN1 (ENSTGUG00000000810) #25 PUM1 (ENSTGUG00000024366) #26 SDC3 (ENSTGUG00000020924) #27 LAPTM5 (ENSTGUG00000000801) #28 MATN1 (ENSTGUG00000000798) #29 ENSTGUG00000019589 ENSTGUG00000019215 PTPRU (ENSTGUG00000000777) #30 MECR (ENSTGUG00000018775) #31 SRSF4 (ENSTGUG00000000765) #32 ENSTGUG00000000758 TMEM200B (ENSTGUG00000027325) #33 EPB41 (ENSTGUG00000000745) #34 Galloanserae ANCESTRAL SPECIES 25 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 ENSGT00940000155019.a.a Anatidae ANCESTRAL SPECIES 21 ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00960000189438 ENSGT00940000155019.a.a Duck MODERN SPECIES 15 RPA2 (ENSAPLG00000002616) THEMIS2 (ENSAPLG00000029421) PPP1R8 (ENSAPLG00000001009) CITED4 (ENSAPLG00000001420) ENSAPLG00000027766 ENSAPLG00000024549 ENSAPLG00000004280 CTPS1 (ENSAPLG00000016028) SCMH1 (ENSAPLG00000015777) FOXO6 (ENSAPLG00000017296) EDN2 (ENSAPLG00000022389) HIVEP3 (ENSAPLG00000030198) ENSAPLG00000024413 SERINC2 (ENSAPLG00000010195) #21 ENSAPLG00000024434 FABP3 (ENSAPLG00000010145) #22 ZCCHC17 (ENSAPLG00000021781) #23 SNRNP40 (ENSAPLG00000009767) #24 NKAIN1 (ENSAPLG00000029636) #25 PUM1 (ENSAPLG00000009351) #26 SDC3 (ENSAPLG00000020532) #27 LAPTM5 (ENSAPLG00000009157) #28 MATN1 (ENSAPLG00000008828) #29 PTPRU (ENSAPLG00000006899) #30 MECR (ENSAPLG00000006736) #31 SRSF4 (ENSAPLG00000006595) #32 ENSAPLG00000016290 TMEM200B (ENSAPLG00000023489) #33 EPB41 (ENSAPLG00000016409) #34 ENSAPLG00000002488 TRNAU1AP (ENSAPLG00000002606) Pink-footed goose MODERN SPECIES 107 EYA3 (ENSABRG00000008872) XKR8 (ENSABRG00000008945) SMPDL3B (ENSABRG00000008952) RPA2 (ENSABRG00000008960) THEMIS2 (ENSABRG00000008971) PPP1R8 (ENSABRG00000008978) STX12 (ENSABRG00000008993) CITED4 (ENSABRG00000009008) CTPS1 (ENSABRG00000009017) SCMH1 (ENSABRG00000009051) FOXO6 (ENSABRG00000009066) EDN2 (ENSABRG00000009087) HIVEP3 (ENSABRG00000009119) SERINC2 (ENSABRG00000009143) #21 ENSABRG00000009147 FABP3 (ENSABRG00000009162) #22 ZCCHC17 (ENSABRG00000009170) #23 SNRNP40 (ENSABRG00000009178) #24 NKAIN1 (ENSABRG00000009208) #25 PUM1 (ENSABRG00000009230) #26 SDC3 (ENSABRG00000009285) #27 LAPTM5 (ENSABRG00000009335) #28 MATN1 (ENSABRG00000009343) #29 PTPRU (ENSABRG00000009384) #30 MECR (ENSABRG00000009461) #31 ENSABRG00000009602 #32 ENSABRG00000009605 #32 ENSABRG00000009612 TMEM200B (ENSABRG00000009654) #33 EPB41 (ENSABRG00000009662) #34 ENSABRG00000009691 Phasianidae ANCESTRAL SPECIES 24 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00940000154265.bc.c.a.b ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00390000004173 ENSGT00940000159599 ENSGT00620000087993.a.b ENSGT00940000157260 ENSGT00520000055567.b ENSGT00940000157740 ENSGT00940000153295.a ENSGT00390000007879 Japanese quail MODERN SPECIES 15 SMPDL3B (ENSCJPG00005015568) RPA2 (ENSCJPG00005015567) ENSCJPG00005015566 PPP1R8 (ENSCJPG00005015564) STX12 (ENSCJPG00005015512) ENSCJPG00005015508 CITED4 (ENSCJPG00005015507) CTPS1 (ENSCJPG00005015504) SCMH1 (ENSCJPG00005015503) ENSCJPG00005015502 FOXO6 (ENSCJPG00005015500) EDN2 (ENSCJPG00005015495) HIVEP3 (ENSCJPG00005015494) SERINC2 (ENSCJPG00005015489) #21 ENSCJPG00005015488 FABP3 (ENSCJPG00005015487) #22 ZCCHC17 (ENSCJPG00005015486) #23 SNRNP40 (ENSCJPG00005015485) #24 NKAIN1 (ENSCJPG00005015483) #25 PUM1 (ENSCJPG00005015479) #26 SDC3 (ENSCJPG00005015477) #27 ENSCJPG00005015475 LAPTM5 (ENSCJPG00005015474) #28 MATN1 (ENSCJPG00005015473) #29 ZNF593 (ENSCJPG00005015472) CNKSR1 (ENSCJPG00005015471) CEP85 (ENSCJPG00005015470) SH3BGRL3 (ENSCJPG00005015469) UBXN11 (ENSCJPG00005015468) CRYBG2 (ENSCJPG00005015466) LIN28A (ENSCJPG00005015465) Phasianidae_b ANCESTRAL SPECIES 23 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00940000154265.bc.c.a.b ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000153446.a.b #28 ENSGT00940000159638 #29 ENSGT00390000004173 ENSGT00940000159599 ENSGT00620000087993.a.b ENSGT00940000157260 ENSGT00520000055567.b ENSGT00940000157740 ENSGT00940000153295.a ENSGT00390000007879 Turkey MODERN SPECIES 17 ENSMGAG00000018005 ENSMGAG00000007923 ENSMGAG00000003845 ENSMGAG00000022036 ENSMGAG00000009632 ENSMGAG00000001596 #35 ENSMGAG00000016573 ENSMGAG00000001699 ENSMGAG00000001535 SDC3 (ENSMGAG00000000717) #27 ENSMGAG00000021607 #26 ENSMGAG00000000724 #26 ENSMGAG00000019520 ENSMGAG00000021083 #25 SNRNP40 (ENSMGAG00000000765) #24 ENSMGAG00000000794 #22 ENSMGAG00000000777 #23 ENSMGAG00000018093 ENSMGAG00000019972 SERINC2 (ENSMGAG00000000799) #21 ENSMGAG00000018134 ENSMGAG00000000882 ENSMGAG00000018980 ENSMGAG00000022242 ENSMGAG00000000902 ENSMGAG00000000929 ENSMGAG00000021558 CITED4 (ENSMGAG00000021892) ENSMGAG00000001063 PPP1R8 (ENSMGAG00000001116) ENSMGAG00000001131 Chicken MODERN SPECIES 15 XKR8 (ENSGALG00010012773) SMPDL3B (ENSGALG00010012763) RPA2 (ENSGALG00010012756) ENSGALG00010012743 PPP1R8 (ENSGALG00010012709) STX12 (ENSGALG00010013257) ENSGALG00010013230 CITED4 (ENSGALG00010013227) CTPS1 (ENSGALG00010013047) SCMH1 (ENSGALG00010013017) FOXO6 (ENSGALG00010015084) EDN2 (ENSGALG00010015070) HIVEP3 (ENSGALG00010015050) SERINC2 (ENSGALG00010012995) #21 ENSGALG00010012971 FABP3 (ENSGALG00010012956) #22 ZCCHC17 (ENSGALG00010012933) #23 SNRNP40 (ENSGALG00010012922) #24 NKAIN1 (ENSGALG00010012905) #25 PUM1 (ENSGALG00010013453) #26 SDC3 (ENSGALG00010013435) #27 LAPTM5 (ENSGALG00010013414) #28 MATN1 (ENSGALG00010013397) #29 ZNF593 (ENSGALG00010013379) CNKSR1 (ENSGALG00010013370) CEP85 (ENSGALG00010013365) SH3BGRL3 (ENSGALG00010013334) UBXN11 (ENSGALG00010013315) CRYBG2 (ENSGALG00010016744) LIN28A (ENSGALG00010016718) DHDDS (ENSGALG00010014547) Australian saltwater crocodile MODERN SPECIES 58 XKR8 (ENSCPRG00005004560) SMPDL3B (ENSCPRG00005004553) RPA2 (ENSCPRG00005004551) THEMIS2 (ENSCPRG00005004536) PPP1R8 (ENSCPRG00005004527) STX12 (ENSCPRG00005004518) CITED4 (ENSCPRG00005004515) CTPS1 (ENSCPRG00005004496) SLFNL1 (ENSCPRG00005004487) SCMH1 (ENSCPRG00005004467) FOXO6 (ENSCPRG00005004459) EDN2 (ENSCPRG00005004450) HIVEP3 (ENSCPRG00005004442) SERINC2 (ENSCPRG00005004415) #21 ENSCPRG00005004409 FABP3 (ENSCPRG00005004406) #22 ZCCHC17 (ENSCPRG00005004404) #23 SNRNP40 (ENSCPRG00005004400) #24 NKAIN1 (ENSCPRG00005004391) #25 PUM1 (ENSCPRG00005004332) #26 SDC3 (ENSCPRG00005004325) #27 LAPTM5 (ENSCPRG00005004321) #28 MATN1 (ENSCPRG00005004313) #29 ENSCPRG00005004308 SLC30A2 (ENSCPRG00005004279) TRIM63 (ENSCPRG00005004274) PDIK1L (ENSCPRG00005004272) FAM110D (ENSCPRG00005004270) ENSCPRG00005004265 ZNF593 (ENSCPRG00005004261) CNKSR1 (ENSCPRG00005004249) Lepidosauria ANCESTRAL SPECIES 18 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT00940000162094 tuatara MODERN SPECIES 662 ENSSPUG00000006973 SERINC2 (ENSSPUG00000006953) #21 ENSSPUG00000006942 FABP3 (ENSSPUG00000006916) #22 ZCCHC17 (ENSSPUG00000006912) #23 SNRNP40 (ENSSPUG00000006897) #24 Episquamata ANCESTRAL SPECIES 7 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT00940000162094 Toxicofera ANCESTRAL SPECIES 24 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT00940000162094 Elapidae ANCESTRAL SPECIES 9 ENSGT00950000182978.B.k ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.h #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833.f #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT01010000229478 Elapidae_a ANCESTRAL SPECIES 15 ENSGT00950000182978.B.k ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.h #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833.f #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT01010000229478 Acanthophiinae ANCESTRAL SPECIES 22 ENSGT00950000182978.B.k ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209.h #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833.f #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT01010000229478 Mainland tiger snake MODERN SPECIES 117 PTAFR (ENSNSUG00000013243) EYA3 (ENSNSUG00000013242) XKR8 (ENSNSUG00000013241) SMPDL3B (ENSNSUG00000013240) RPA2 (ENSNSUG00000013239) PPP1R8 (ENSNSUG00000013237) STX12 (ENSNSUG00000013220) CITED4 (ENSNSUG00000013219) CTPS1 (ENSNSUG00000013131) SLFNL1 (ENSNSUG00000013130) SCMH1 (ENSNSUG00000013129) FOXO6 (ENSNSUG00000013128) ENSNSUG00000013127 HIVEP3 (ENSNSUG00000013126) SERINC2 (ENSNSUG00000013125) #21 FABP3 (ENSNSUG00000013124) #22 ZCCHC17 (ENSNSUG00000013123) #23 SNRNP40 (ENSNSUG00000013122) #24 ENSNSUG00000013121 NKAIN1 (ENSNSUG00000013119) #25 PUM1 (ENSNSUG00000011894) #26 SDC3 (ENSNSUG00000011893) #27 MATN1 (ENSNSUG00000011892) #29 PTPRU (ENSNSUG00000011891) #30 Eastern brown snake MODERN SPECIES 19 SMPDL3B (ENSPTXG00000009929) RPA2 (ENSPTXG00000009930) PPP1R8 (ENSPTXG00000009931) STX12 (ENSPTXG00000009933) CITED4 (ENSPTXG00000009934) CTPS1 (ENSPTXG00000009935) SLFNL1 (ENSPTXG00000009937) SCMH1 (ENSPTXG00000009938) ENSPTXG00000009939 ENSPTXG00000009940 ENSPTXG00000009942 ENSPTXG00000009944 ENSPTXG00000009945 SERINC2 (ENSPTXG00000009946) #21 ENSPTXG00000009948 FABP3 (ENSPTXG00000009949) #22 ZCCHC17 (ENSPTXG00000009950) #23 SNRNP40 (ENSPTXG00000009951) #24 NKAIN1 (ENSPTXG00000009953) #25 PUM1 (ENSPTXG00000009955) #26 SDC3 (ENSPTXG00000009958) #27 MATN1 (ENSPTXG00000009959) #29 PTPRU (ENSPTXG00000009987) #30 MECR (ENSPTXG00000016666) #31 SRSF4 (ENSPTXG00000016672) #32 ENSPTXG00000016678 TMEM200B (ENSPTXG00000016686) #33 EPB41 (ENSPTXG00000005359) #34 TRNAU1AP (ENSPTXG00000005360) ENSPTXG00000005364 ENSPTXG00000005365 Blue-lipped sea krait MODERN SPECIES 3297 ENSLLTG00000000964 FABP3 (ENSLLTG00000000951) #22 Indian cobra MODERN SPECIES 11 EYA3 (ENSNNAG00000006276) XKR8 (ENSNNAG00000006257) SMPDL3B (ENSNNAG00000006236) RPA2 (ENSNNAG00000006209) PPP1R8 (ENSNNAG00000006137) CITED4 (ENSNNAG00000006113) CTPS1 (ENSNNAG00000006037) SLFNL1 (ENSNNAG00000006020) SCMH1 (ENSNNAG00000005977) FOXO6 (ENSNNAG00000005966) EDN2 (ENSNNAG00000005949) HIVEP3 (ENSNNAG00000005931) ENSNNAG00000005902 SERINC2 (ENSNNAG00000005859) #21 ENSNNAG00000005844 FABP3 (ENSNNAG00000005836) #22 ZCCHC17 (ENSNNAG00000005812) #23 SNRNP40 (ENSNNAG00000005786) #24 NKAIN1 (ENSNNAG00000005764) #25 PUM1 (ENSNNAG00000005701) #26 SDC3 (ENSNNAG00000005676) #27 MATN1 (ENSNNAG00000005599) #29 PTPRU (ENSNNAG00000005457) #30 MECR (ENSNNAG00000005423) #31 SRSF4 (ENSNNAG00000005392) #32 ENSNNAG00000005357 TMEM200B (ENSNNAG00000005329) #33 ENSNNAG00000005305 #34 ENSNNAG00000005215 #34 ENSNNAG00000005058 TRNAU1AP (ENSNNAG00000005026) Laterata ANCESTRAL SPECIES 27 ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000157151 #30 ENSGT00940000156592 #31 ENSGT00940000156213 #32 ENSGT00940000158264.b ENSGT00530000063698.b #33 ENSGT00940000157833 #34 ENSGT00940000155019.a.a ENSGT00940000156139.ab ENSGT00940000162094 Argentine black and white tegu MODERN SPECIES 53 PPP1R8 (ENSSMRG00000003508) ENSSMRG00000003497 STX12 (ENSSMRG00000003493) CITED4 (ENSSMRG00000003480) ENSSMRG00000003474 ENSSMRG00000003462 ENSSMRG00000003459 CTPS1 (ENSSMRG00000003431) SLFNL1 (ENSSMRG00000003429) SCMH1 (ENSSMRG00000003421) FOXO6 (ENSSMRG00000003379) EDN2 (ENSSMRG00000003374) ENSSMRG00000003367 SERINC2 (ENSSMRG00000003354) #21 ENSSMRG00000003352 FABP3 (ENSSMRG00000003351) #22 ZCCHC17 (ENSSMRG00000003347) #23 SNRNP40 (ENSSMRG00000003344) #24 NKAIN1 (ENSSMRG00000003331) #25 PUM1 (ENSSMRG00000003312) #26 SDC3 (ENSSMRG00000003299) #27 MATN1 (ENSSMRG00000003296) #29 PTPRU (ENSSMRG00000003252) #30 MECR (ENSSMRG00000003204) #31 SRSF4 (ENSSMRG00000003199) #32 ENSSMRG00000003188 TMEM200B (ENSSMRG00000003175) #33 EPB41 (ENSSMRG00000003074) #34 ENSSMRG00000002872 TRNAU1AP (ENSSMRG00000002863) ENSSMRG00000002848 Common wall lizard MODERN SPECIES 16 XKR8 (ENSPMRG00000015639) SMPDL3B (ENSPMRG00000015642) RPA2 (ENSPMRG00000015653) ENSPMRG00000015658 PPP1R8 (ENSPMRG00000015663) STX12 (ENSPMRG00000015673) CITED4 (ENSPMRG00000015682) CTPS1 (ENSPMRG00000015688) SLFNL1 (ENSPMRG00000015724) SCMH1 (ENSPMRG00000015730) FOXO6 (ENSPMRG00000015755) EDN2 (ENSPMRG00000015758) ENSPMRG00000015763 ENSPMRG00000015768 SERINC2 (ENSPMRG00000015782) #21 FABP3 (ENSPMRG00000015812) #22 ZCCHC17 (ENSPMRG00000015825) #23 SNRNP40 (ENSPMRG00000015842) #24 PUM1 (ENSPMRG00000015869) #26 SDC3 (ENSPMRG00000006705) #27 MATN1 (ENSPMRG00000006711) #29 ENSPMRG00000006716 ENSPMRG00000006719 ENSPMRG00000006722 ENSPMRG00000006725 ENSPMRG00000006727 PTPRU (ENSPMRG00000007102) #30 MECR (ENSPMRG00000008579) #31 SRSF4 (ENSPMRG00000008594) #32 ENSPMRG00000008609 TMEM200B (ENSPMRG00000008642) #33 Anura ANCESTRAL SPECIES 82 ENSGT00940000164873 ENSGT00390000002144 ENSGT00410000025596.a.b #37 ENSGT00940000156761 #36 ENSGT00940000167209 ENSGT00940000160504 ENSGT00940000161085 ENSGT00940000155543 ENSGT00910000144179.b.b ENSGT00940000157999 ENSGT00940000161401 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00390000012569.a ENSGT01060000248589.D ENSGT00950000182978.B ENSGT01090000260093.b ENSGT00950000183182.a.a ENSGT00390000010045 ENSGT00530000063770.c.a ENSGT00940000156115 ENSGT01000000214440.A.a.b.a Leishan spiny toad MODERN SPECIES 9 ENSLLEG00000020047 TMEM17 (ENSLLEG00000019985) RTN4RL2 (ENSLLEG00000019875) ENSLLEG00000019838 ENSLLEG00000019533 ENSLLEG00000019492 ENSLLEG00000019406 KDM2A (ENSLLEG00000018947) ENSLLEG00000018570 ENSLLEG00000018527 ENSLLEG00000018016 ENSLLEG00000017772 ENSLLEG00000017724 ENSLLEG00000017709 ENSLLEG00000017471 ENSLLEG00000017441 #22 ENSLLEG00000017104 ENSLLEG00000017027 ENSLLEG00000016977 ENSLLEG00000016953 ENSLLEG00000016925 PARG (ENSLLEG00000016165) ENSLLEG00000016083 ENSLLEG00000016070 ENSLLEG00000016040 ENSLLEG00000016023 ENSLLEG00000016007 ENSLLEG00000015956 ENSLLEG00000015939 ENSLLEG00000015919 ENSLLEG00000015898 Frog MODERN SPECIES 2 rab39a (ENSXETG00000020622) taf12 (ENSXETG00000020616) ENSXETG00000020617 tcea3 (ENSXETG00000012975) oprd1 (ENSXETG00000033842) #35 rcc1 (ENSXETG00000012969) ctps1 (ENSXETG00000012949) scmh1 (ENSXETG00000012966) FOXO6 (ENSXETG00000012944) ENSXETG00000048943 ENSXETG00000042165 edn2 (ENSXETG00000041205) hivep3 (ENSXETG00000035857) serinc2 (ENSXETG00000012918) #21 ENSXETG00000037994 fabp3 (ENSXETG00000012916) #22 zcchc17 (ENSXETG00000012917) #23 snrnp40 (ENSXETG00000012910) #24 nkain1 (ENSXETG00000012908) #25 pum1 (ENSXETG00000012904) #26 dnajc8 (ENSXETG00000012902) ptafr (ENSXETG00000012892) eya3 (ENSXETG00000012888) xkr8 (ENSXETG00000030874) smpdl3b (ENSXETG00000012883) rpa2 (ENSXETG00000001834) ENSXETG00000048899 themis2 (ENSXETG00000001835) ppp1r8 (ENSXETG00000011507) maneal (ENSXETG00000011508) utp11 (ENSXETG00000023077) Coelacanth MODERN SPECIES 375 YTHDF2 (ENSLACG00000011489) #36 GMEB1 (ENSLACG00000011757) #37 ENSLACG00000012084 TAF12 (ENSLACG00000012470) rab42b (ENSLACG00000012674) rab42a (ENSLACG00000012755) ENSLACG00000012890 CITED4 (ENSLACG00000013269) CTPS1 (ENSLACG00000014319) SLFNL1 (ENSLACG00000014475) SCMH1 (ENSLACG00000014533) ENSLACG00000014955 ENSLACG00000015303 HIVEP3 (ENSLACG00000016032) SERINC2 (ENSLACG00000016809) #21 FABP3 (ENSLACG00000016920) #22 ZCCHC17 (ENSLACG00000016945) #23 SNRNP40 (ENSLACG00000016969) #24 NKAIN1 (ENSLACG00000017105) #25 PUM1 (ENSLACG00000017188) #26 SDC3 (ENSLACG00000017319) #27 LAPTM5 (ENSLACG00000017556) #28 MATN1 (ENSLACG00000017597) #29 Actinopterygii ANCESTRAL SPECIES 72 ENSGT00940000156761 #36 ENSGT00940000167209 ENSGT00940000160504 ENSGT00940000160992 ENSGT00940000155115.a.b ENSGT00940000165326 ENSGT00940000157034 ENSGT00940000155393.d ENSGT00940000157669 #35 ENSGT00940000155543 ENSGT00940000157582 ENSGT00950000183053.A ENSGT00940000157218.C ENSGT01030000234623.a.a.b #21 ENSGT01030000235111 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a Neopterygii ANCESTRAL SPECIES 107 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000160723 ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00530000063583.b ENSGT00950000182962.b.b ENSGT01060000248564.b.a.a.b ENSGT00550000074943 Osteoglossocephalai ANCESTRAL SPECIES 25 ENSGT00940000172951 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000160796 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160073 Clupeocephala ANCESTRAL SPECIES 219 ENSGT00940000172951 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000155462.ab ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Euteleosteomorpha ANCESTRAL SPECIES 83 ENSGT00940000172951 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000155462.ab ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Acanthomorphata ANCESTRAL SPECIES 55 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT01100000263491.a.a.c.b ENSGT00940000159968 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT01100000263491.a.a.c.b Tiger tail seahorse MODERN SPECIES 231 atp9b (ENSHCOG00000004727) sall3b (ENSHCOG00000004745) ENSHCOG00000004754 fkbp9 (ENSHCOG00000004765) crtap (ENSHCOG00000004794) ENSHCOG00000004809 fbxl2 (ENSHCOG00000004849) ENSHCOG00000004857 clasp2 (ENSHCOG00000004910) ubp1 (ENSHCOG00000004965) pdcd6ip (ENSHCOG00000004996) ENSHCOG00000005036 cyhr1 (ENSHCOG00000005045) ENSHCOG00000005054 ENSHCOG00000005061 fabp3 (ENSHCOG00000005071) #22 zcchc17 (ENSHCOG00000005075) #23 snrnp40 (ENSHCOG00000005094) #24 nkain1 (ENSHCOG00000005114) #25 ENSHCOG00000005122 pum1 (ENSHCOG00000005149) #26 SDC3 (ENSHCOG00000005166) #27 ENSHCOG00000005175 matn1 (ENSHCOG00000005192) #29 ENSHCOG00000005199 slc52a2 (ENSHCOG00000005205) ENSHCOG00000005215 ENSHCOG00000005247 ENSHCOG00000005259 pleca (ENSHCOG00000005410) eif3eb (ENSHCOG00000005454) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000165470 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000165470 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 Anabantaria ANCESTRAL SPECIES 16 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 Climbing perch MODERN SPECIES 2 ENSATEG00000014937 ENSATEG00000015023 ENSATEG00000015095 ENSATEG00000015157 ENSATEG00000015171 fkbp9 (ENSATEG00000015195) crtap (ENSATEG00000015226) ENSATEG00000029627 fbxl2 (ENSATEG00000015310) clasp2 (ENSATEG00000015363) ubp1 (ENSATEG00000015444) pdcd6ip (ENSATEG00000015499) ENSATEG00000015519 cyhr1 (ENSATEG00000015544) ENSATEG00000028692 fabp3 (ENSATEG00000015920) #22 zcchc17 (ENSATEG00000015942) #23 snrnp40 (ENSATEG00000015948) #24 nkain1 (ENSATEG00000015970) #25 pum1 (ENSATEG00000016004) #26 SDC3 (ENSATEG00000016076) #27 matn1 (ENSATEG00000016093) #29 sesn2 (ENSATEG00000016139) yrk (ENSATEG00000016203) ENSATEG00000016279 wasf2 (ENSATEG00000016290) gpr3 (ENSATEG00000016302) ENSATEG00000016326 ENSATEG00000016350 ENSATEG00000016388 pex1 (ENSATEG00000016418) Siamese fighting fish MODERN SPECIES 2 cfap300 (ENSBSLG00000025795) KCNQ4 (ENSBSLG00000025742) nfyc (ENSBSLG00000025658) RPRD1A (ENSBSLG00000025634) fkbp9 (ENSBSLG00000025558) crtap (ENSBSLG00000025539) ENSBSLG00000025522 fbxl2 (ENSBSLG00000025439) clasp2 (ENSBSLG00000022768) ubp1 (ENSBSLG00000022132) pdcd6ip (ENSBSLG00000021280) ENSBSLG00000020316 ENSBSLG00000020306 cyhr1 (ENSBSLG00000020292) ENSBSLG00000020135 fabp3 (ENSBSLG00000020056) #22 zcchc17 (ENSBSLG00000019979) #23 snrnp40 (ENSBSLG00000019830) #24 nkain1 (ENSBSLG00000019788) #25 pum1 (ENSBSLG00000019546) #26 SDC3 (ENSBSLG00000019515) #27 ENSBSLG00000019511 matn1 (ENSBSLG00000019476) #29 sesn2 (ENSBSLG00000019421) yrk (ENSBSLG00000018472) AHDC1 (ENSBSLG00000018433) wasf2 (ENSBSLG00000018375) gpr3 (ENSBSLG00000018363) ENSBSLG00000018356 sytl1 (ENSBSLG00000018316) efcab1 (ENSBSLG00000018291) Zig-zag eel MODERN SPECIES 2 ENSMAMG00000012384 #19 ENSMAMG00000012366 ENSMAMG00000012339 ENSMAMG00000012280 ENSMAMG00000012247 fkbp9 (ENSMAMG00000012223) crtap (ENSMAMG00000012213) ENSMAMG00000012197 fbxl2 (ENSMAMG00000012170) clasp2 (ENSMAMG00000011902) ubp1 (ENSMAMG00000011804) pdcd6ip (ENSMAMG00000011771) ENSMAMG00000011755 cyhr1 (ENSMAMG00000011735) ENSMAMG00000011727 fabp3 (ENSMAMG00000026283) #22 zcchc17 (ENSMAMG00000011701) #23 snrnp40 (ENSMAMG00000011680) #24 nkain1 (ENSMAMG00000011666) #25 pum1 (ENSMAMG00000011606) #26 ENSMAMG00000011597 SDC3 (ENSMAMG00000011593) #27 matn1 (ENSMAMG00000011559) #29 sesn2 (ENSMAMG00000011556) yrk (ENSMAMG00000011539) ENSMAMG00000011526 wasf2 (ENSMAMG00000011496) gpr3 (ENSMAMG00000011470) ENSMAMG00000011450 ENSMAMG00000011436 ENSMAMG00000026305 Carangaria ANCESTRAL SPECIES 14 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 Seriola ANCESTRAL SPECIES 12 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT01100000263710 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Greater amberjack MODERN SPECIES 48 KCNQ4 (ENSSDUG00000009542) nfyc (ENSSDUG00000009492) ENSSDUG00000009470 RPRD1A (ENSSDUG00000009440) fkbp9 (ENSSDUG00000009427) crtap (ENSSDUG00000009411) ENSSDUG00000009403 fbxl2 (ENSSDUG00000009383) ENSSDUG00000009369 clasp2 (ENSSDUG00000009311) ubp1 (ENSSDUG00000009258) ENSSDUG00000009214 ENSSDUG00000009188 cyhr1 (ENSSDUG00000009157) ENSSDUG00000009135 fabp3 (ENSSDUG00000009119) #22 zcchc17 (ENSSDUG00000009095) #23 snrnp40 (ENSSDUG00000009073) #24 nkain1 (ENSSDUG00000009061) #25 pum1 (ENSSDUG00000009021) #26 SDC3 (ENSSDUG00000009005) #27 matn1 (ENSSDUG00000008977) #29 sesn2 (ENSSDUG00000008919) yrk (ENSSDUG00000008865) AHDC1 (ENSSDUG00000008843) ENSSDUG00000008827 wasf2 (ENSSDUG00000008811) gpr3 (ENSSDUG00000008797) sytl1 (ENSSDUG00000008733) efcab1 (ENSSDUG00000008664) rbm48 (ENSSDUG00000008641) Yellowtail amberjack MODERN SPECIES 2890 nfyc (ENSSLDG00000010606) ENSSLDG00000010572 RPRD1A (ENSSLDG00000010537) fkbp9 (ENSSLDG00000010478) crtap (ENSSLDG00000010447) ENSSLDG00000010419 fbxl2 (ENSSLDG00000010355) ENSSLDG00000010321 clasp2 (ENSSLDG00000010239) ubp1 (ENSSLDG00000010188) ENSSLDG00000010078 ENSSLDG00000010034 cyhr1 (ENSSLDG00000009992) ENSSLDG00000009980 ENSSLDG00000009966 fabp3 (ENSSLDG00000009949) #22 zcchc17 (ENSSLDG00000009837) #23 snrnp40 (ENSSLDG00000009778) #24 nkain1 (ENSSLDG00000009742) #25 pum1 (ENSSLDG00000009667) #26 SDC3 (ENSSLDG00000009649) #27 matn1 (ENSSLDG00000009602) #29 sesn2 (ENSSLDG00000009540) yrk (ENSSLDG00000009505) AHDC1 (ENSSLDG00000009452) wasf2 (ENSSLDG00000009424) gpr3 (ENSSLDG00000009406) sytl1 (ENSSLDG00000009367) efcab1 (ENSSLDG00000009280) rbm48 (ENSSLDG00000009209) pex1 (ENSSLDG00000009178) Barramundi perch MODERN SPECIES 163 cfap300 (ENSLCAG00010009599) KCNQ4 (ENSLCAG00010009592) nfyc (ENSLCAG00010009584) ENSLCAG00010009576 RPRD1A (ENSLCAG00010009573) fkbp9 (ENSLCAG00010009525) crtap (ENSLCAG00010009497) ENSLCAG00010009488 fbxl2 (ENSLCAG00010009485) clasp2 (ENSLCAG00010008731) ubp1 (ENSLCAG00010008477) pdcd6ip (ENSLCAG00010008358) ENSLCAG00010008314 cyhr1 (ENSLCAG00010008295) ENSLCAG00010008219 fabp3 (ENSLCAG00010008193) #22 zcchc17 (ENSLCAG00010008172) #23 snrnp40 (ENSLCAG00010008123) #24 nkain1 (ENSLCAG00010008114) #25 pum1 (ENSLCAG00010008106) #26 ENSLCAG00010008092 #26 ENSLCAG00010008089 matn1 (ENSLCAG00010008083) #29 sesn2 (ENSLCAG00010008057) yrk (ENSLCAG00010008022) AHDC1 (ENSLCAG00010007997) wasf2 (ENSLCAG00010007987) gpr3 (ENSLCAG00010007985) ENSLCAG00010007981 sytl1 (ENSLCAG00010007948) efcab1 (ENSLCAG00010007937) Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 Tongue sole MODERN SPECIES 9 TINAGL1 (ENSCSEG00000017097) #19 lim2.4 (ENSCSEG00000017089) ENSCSEG00000017082 UBQLN4 (ENSCSEG00000017036) rab25a (ENSCSEG00000017026) ENSCSEG00000017005 ENSCSEG00000016989 kat2b (ENSCSEG00000016972) fbxl2 (ENSCSEG00000016957) ENSCSEG00000016948 clasp2 (ENSCSEG00000016910) ubp1 (ENSCSEG00000016364) pdcd6ip (ENSCSEG00000016266) cyhr1 (ENSCSEG00000016245) ENSCSEG00000016146 fabp3 (ENSCSEG00000016106) #22 zcchc17 (ENSCSEG00000016039) #23 snrnp40 (ENSCSEG00000016015) #24 nkain1 (ENSCSEG00000016008) #25 ENSCSEG00000016001 pum1 (ENSCSEG00000015981) #26 SDC3 (ENSCSEG00000015975) #27 matn1 (ENSCSEG00000015965) #29 sesn2 (ENSCSEG00000015952) yrk (ENSCSEG00000015945) AHDC1 (ENSCSEG00000015938) wasf2 (ENSCSEG00000015926) gpr3 (ENSCSEG00000015920) sytl1 (ENSCSEG00000015907) efcab1 (ENSCSEG00000015901) rbm48 (ENSCSEG00000015892) Turbot MODERN SPECIES 14 ENSSMAG00000009852 ENSSMAG00000009872 ENSSMAG00000009905 ENSSMAG00000009961 ENSSMAG00000010001 ubp1 (ENSSMAG00000010036) clasp2 (ENSSMAG00000010193) fbxl2 (ENSSMAG00000010521) ENSSMAG00000010596 crtap (ENSSMAG00000010631) fkbp9 (ENSSMAG00000010666) pdcd6ip (ENSSMAG00000010694) ENSSMAG00000010735 cyhr1 (ENSSMAG00000010771) ENSSMAG00000010800 fabp3 (ENSSMAG00000026107) #22 zcchc17 (ENSSMAG00000023280) #23 snrnp40 (ENSSMAG00000010857) #24 nkain1 (ENSSMAG00000010877) #25 pum1 (ENSSMAG00000010918) #26 SDC3 (ENSSMAG00000011055) #27 matn1 (ENSSMAG00000011096) #29 sesn2 (ENSSMAG00000011123) yrk (ENSSMAG00000011159) ENSSMAG00000011214 wasf2 (ENSSMAG00000011240) gpr3 (ENSSMAG00000011252) ENSSMAG00000011273 ENSSMAG00000011308 ENSSMAG00000011292 pex1 (ENSSMAG00000011321) Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000165470 ENSGT00940000154446.b.b.a Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000173087 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000165470 ENSGT00940000159968 Tetraodon MODERN SPECIES 15 cfap300 (ENSTNIG00000003181) ENSTNIG00000000586 KCNQ4 (ENSTNIG00000003182) nfyc (ENSTNIG00000016968) RPRD1A (ENSTNIG00000016969) fkbp9 (ENSTNIG00000016970) crtap (ENSTNIG00000016971) ENSTNIG00000000051 fbxl2 (ENSTNIG00000016972) clasp2 (ENSTNIG00000016973) ubp1 (ENSTNIG00000016974) pdcd6ip (ENSTNIG00000016975) ENSTNIG00000016976 cyhr1 (ENSTNIG00000016977) ENSTNIG00000016978 fabp3 (ENSTNIG00000016979) #22 zcchc17 (ENSTNIG00000016980) #23 snrnp40 (ENSTNIG00000016981) #24 nkain1 (ENSTNIG00000016982) #25 pum1 (ENSTNIG00000016983) #26 SDC3 (ENSTNIG00000016984) #27 matn1 (ENSTNIG00000016985) #29 yrk (ENSTNIG00000016986) ENSTNIG00000016987 wasf2 (ENSTNIG00000016988) sytl1 (ENSTNIG00000016989) efcab1 (ENSTNIG00000016990) rbm48 (ENSTNIG00000016991) pex1 (ENSTNIG00000016992) elmo1 (ENSTNIG00000016993) rp9 (ENSTNIG00000016994) Fugu MODERN SPECIES 3 cfap300 (ENSTRUG00000014398) KCNQ4 (ENSTRUG00000014313) nfyc (ENSTRUG00000014244) ENSTRUG00000023414 RPRD1A (ENSTRUG00000014193) fkbp9 (ENSTRUG00000014068) crtap (ENSTRUG00000014024) ENSTRUG00000020342 fbxl2 (ENSTRUG00000013949) clasp2 (ENSTRUG00000013726) ubp1 (ENSTRUG00000013570) pdcd6ip (ENSTRUG00000013431) ENSTRUG00000013414 cyhr1 (ENSTRUG00000013359) ENSTRUG00000025961 fabp3 (ENSTRUG00000022364) #22 zcchc17 (ENSTRUG00000013252) #23 snrnp40 (ENSTRUG00000013161) #24 nkain1 (ENSTRUG00000013140) #25 pum1 (ENSTRUG00000013121) #26 SDC3 (ENSTRUG00000024296) #27 ENSTRUG00000032188 sesn2 (ENSTRUG00000012703) yrk (ENSTRUG00000012570) AHDC1 (ENSTRUG00000021782) ENSTRUG00000021499 wasf2 (ENSTRUG00000012486) gpr3 (ENSTRUG00000030758) sytl1 (ENSTRUG00000012408) ENSTRUG00000012350 rbm48 (ENSTRUG00000012275) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000165470 ENSGT00940000154446.b.b.a Ballan wrasse MODERN SPECIES 42 vps28 (ENSLBEG00000003079) ENSLBEG00000003060 cap2 (ENSLBEG00000003042) rbm24a (ENSLBEG00000003025) ENSLBEG00000003003 nup153 (ENSLBEG00000002982) PTDSS1 (ENSLBEG00000002956) mterf3 (ENSLBEG00000002946) uqcrb (ENSLBEG00000002936) lrrc14b (ENSLBEG00000002930) ubp1 (ENSLBEG00000002852) pdcd6ip (ENSLBEG00000002824) ENSLBEG00000002779 cyhr1 (ENSLBEG00000002750) ENSLBEG00000002697 fabp3 (ENSLBEG00000002665) #22 zcchc17 (ENSLBEG00000002644) #23 snrnp40 (ENSLBEG00000002611) #24 nkain1 (ENSLBEG00000002584) #25 pum1 (ENSLBEG00000002527) #26 SDC3 (ENSLBEG00000002508) #27 ENSLBEG00000002497 matn1 (ENSLBEG00000002480) #29 sesn2 (ENSLBEG00000002464) yrk (ENSLBEG00000002440) AHDC1 (ENSLBEG00000002387) wasf2 (ENSLBEG00000002344) gpr3 (ENSLBEG00000002311) ENSLBEG00000002304 sytl1 (ENSLBEG00000001503) efcab1 (ENSLBEG00000001376) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT01100000263491.a.a.c.b ENSGT00940000159968 ENSGT00390000004541 Perciformes ANCESTRAL SPECIES 11 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 Cottioidei ANCESTRAL SPECIES 16 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT01100000263491.a.a.c.b ENSGT00940000159968 Stickleback MODERN SPECIES 9 PTDSS1 (ENSGACG00000005401) mterf3 (ENSGACG00000005407) uqcrb (ENSGACG00000005419) lrrc14b (ENSGACG00000005427) gatad1 (ENSGACG00000005433) ENSGACG00000005443 fbxl2 (ENSGACG00000005445) ENSGACG00000005492 clasp2 (ENSGACG00000005497) ubp1 (ENSGACG00000005520) pdcd6ip (ENSGACG00000005555) ENSGACG00000005581 ENSGACG00000005588 cyhr1 (ENSGACG00000005591) ENSGACG00000005594 fabp3 (ENSGACG00000005599) #22 zcchc17 (ENSGACG00000005616) #23 snrnp40 (ENSGACG00000005655) #24 nkain1 (ENSGACG00000005700) #25 pum1 (ENSGACG00000005717) #26 ENSGACG00000005736 ENSGACG00000005739 #27 matn1 (ENSGACG00000005741) #29 sesn2 (ENSGACG00000005748) yrk (ENSGACG00000005767) ENSGACG00000005776 wasf2 (ENSGACG00000005777) gpr3 (ENSGACG00000005789) sytl1 (ENSGACG00000005790) efcab1 (ENSGACG00000005798) rbm48 (ENSGACG00000005801) Lumpfish MODERN SPECIES 2 KCNQ4 (ENSCLMG00005003246) nfyc (ENSCLMG00005003265) ENSCLMG00005003294 RPRD1A (ENSCLMG00005003296) fkbp9 (ENSCLMG00005003305) crtap (ENSCLMG00005003578) ENSCLMG00005003579 fbxl2 (ENSCLMG00005003596) clasp2 (ENSCLMG00005004231) ubp1 (ENSCLMG00005017688) pdcd6ip (ENSCLMG00005019295) ENSCLMG00005019302 cyhr1 (ENSCLMG00005019303) ENSCLMG00005019310 ENSCLMG00005019396 fabp3 (ENSCLMG00005019399) #22 zcchc17 (ENSCLMG00005019406) #23 snrnp40 (ENSCLMG00005019417) #24 nkain1 (ENSCLMG00005019564) #25 pum1 (ENSCLMG00005019565) #26 SDC3 (ENSCLMG00005019981) #27 matn1 (ENSCLMG00005019983) #29 sesn2 (ENSCLMG00005019984) yrk (ENSCLMG00005019987) AHDC1 (ENSCLMG00005020023) ENSCLMG00005020044 wasf2 (ENSCLMG00005020047) gpr3 (ENSCLMG00005020049) sytl1 (ENSCLMG00005020051) ENSCLMG00005020054 efcab1 (ENSCLMG00005020057) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 Channel bull blenny MODERN SPECIES 2 TINAGL1 (ENSCGOG00000023343) #19 cfap300 (ENSCGOG00000023333) KCNQ4 (ENSCGOG00000023303) nfyc (ENSCGOG00000023296) ENSCGOG00000023288 RPRD1A (ENSCGOG00000023284) fkbp9 (ENSCGOG00000023235) crtap (ENSCGOG00000023232) fbxl2 (ENSCGOG00000023220) clasp2 (ENSCGOG00000018571) ubp1 (ENSCGOG00000018343) pdcd6ip (ENSCGOG00000017809) ENSCGOG00000017791 cyhr1 (ENSCGOG00000017786) ENSCGOG00000017573 fabp3 (ENSCGOG00000017548) #22 zcchc17 (ENSCGOG00000017543) #23 snrnp40 (ENSCGOG00000017491) #24 nkain1 (ENSCGOG00000017486) #25 pum1 (ENSCGOG00000013699) #26 SDC3 (ENSCGOG00000013609) #27 ENSCGOG00000013606 matn1 (ENSCGOG00000013600) #29 sesn2 (ENSCGOG00000013491) yrk (ENSCGOG00000012846) ENSCGOG00000012829 wasf2 (ENSCGOG00000012820) gpr3 (ENSCGOG00000012816) ENSCGOG00000012788 efcab1 (ENSCGOG00000012784) ENSCGOG00000012780 Pike perch MODERN SPECIES 41 cfap300 (ENSSLUG00000007927) KCNQ4 (ENSSLUG00000007900) nfyc (ENSSLUG00000007788) ENSSLUG00000007770 RPRD1A (ENSSLUG00000007758) fkbp9 (ENSSLUG00000007663) crtap (ENSSLUG00000007641) ENSSLUG00000007630 fbxl2 (ENSSLUG00000007401) clasp2 (ENSSLUG00000002212) ubp1 (ENSSLUG00000001764) pdcd6ip (ENSSLUG00000001521) ENSSLUG00000024666 cyhr1 (ENSSLUG00000024661) ENSSLUG00000024658 fabp3 (ENSSLUG00000024657) #22 zcchc17 (ENSSLUG00000024651) #23 snrnp40 (ENSSLUG00000024638) #24 nkain1 (ENSSLUG00000024629) #25 pum1 (ENSSLUG00000023878) #26 SDC3 (ENSSLUG00000023728) #27 ENSSLUG00000023723 matn1 (ENSSLUG00000023718) #29 sesn2 (ENSSLUG00000023699) yrk (ENSSLUG00000023653) AHDC1 (ENSSLUG00000023634) ENSSLUG00000023625 wasf2 (ENSSLUG00000023621) gpr3 (ENSSLUG00000023613) sytl1 (ENSSLUG00000023604) efcab1 (ENSSLUG00000023599) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT01100000263491.a.a.c.b ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT01100000263491.a.a.c.b ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 European seabass MODERN SPECIES 22 ENSDLAG00005015687 #19 ENSDLAG00005015683 ENSDLAG00005015234 ENSDLAG00005015069 ENSDLAG00005033520 fkbp9 (ENSDLAG00005014859) crtap (ENSDLAG00005030248) ENSDLAG00005035072 fbxl2 (ENSDLAG00005014392) clasp2 (ENSDLAG00005010646) ubp1 (ENSDLAG00005009655) pdcd6ip (ENSDLAG00005008436) ENSDLAG00005008391 cyhr1 (ENSDLAG00005034723) ENSDLAG00005008192 fabp3 (ENSDLAG00005008171) #22 zcchc17 (ENSDLAG00005030970) #23 snrnp40 (ENSDLAG00005007940) #24 nkain1 (ENSDLAG00005007922) #25 pum1 (ENSDLAG00005023846) #26 SDC3 (ENSDLAG00005023804) #27 ENSDLAG00005028332 matn1 (ENSDLAG00005023798) #29 yrk (ENSDLAG00005023223) AHDC1 (ENSDLAG00005029529) gpr3 (ENSDLAG00005027580) wasf2 (ENSDLAG00005029787) ENSDLAG00005023161 ENSDLAG00005033799 ENSDLAG00005023130 ENSDLAG00005023123 Large yellow croaker MODERN SPECIES 484 KCNQ4 (ENSLCRG00005016017) nfyc (ENSLCRG00005015798) ENSLCRG00005015764 ENSLCRG00005015755 ENSLCRG00005015754 fkbp9 (ENSLCRG00005015690) crtap (ENSLCRG00005015650) ENSLCRG00005015641 fbxl2 (ENSLCRG00005015042) clasp2 (ENSLCRG00005011275) ubp1 (ENSLCRG00005010163) pdcd6ip (ENSLCRG00005010076) ENSLCRG00005010047 cyhr1 (ENSLCRG00005010045) ENSLCRG00005009725 fabp3 (ENSLCRG00005009677) #22 zcchc17 (ENSLCRG00005009638) #23 snrnp40 (ENSLCRG00005009485) #24 nkain1 (ENSLCRG00005009472) #25 pum1 (ENSLCRG00005008849) #26 SDC3 (ENSLCRG00005008773) #27 ENSLCRG00005008754 matn1 (ENSLCRG00005008752) #29 sesn2 (ENSLCRG00005008731) yrk (ENSLCRG00005007845) ENSLCRG00005007783 ENSLCRG00005007780 wasf2 (ENSLCRG00005007773) gpr3 (ENSLCRG00005007770) sytl1 (ENSLCRG00005007769) efcab1 (ENSLCRG00005007765) Gilthead seabream MODERN SPECIES 17 cfap300 (ENSSAUG00010009123) KCNQ4 (ENSSAUG00010009139) nfyc (ENSSAUG00010009601) ENSSAUG00010009647 RPRD1A (ENSSAUG00010000139) fkbp9 (ENSSAUG00010000230) crtap (ENSSAUG00010000356) ENSSAUG00010000362 fbxl2 (ENSSAUG00010000374) clasp2 (ENSSAUG00010000585) ubp1 (ENSSAUG00010002759) pdcd6ip (ENSSAUG00010002858) ENSSAUG00010004265 cyhr1 (ENSSAUG00010004297) ENSSAUG00010004335 H-FABP (ENSSAUG00010004679) #22 zcchc17 (ENSSAUG00010004695) #23 snrnp40 (ENSSAUG00010004716) #24 nkain1 (ENSSAUG00010005024) #25 pum1 (ENSSAUG00010005028) #26 SDC3 (ENSSAUG00010005485) #27 ENSSAUG00010005491 matn1 (ENSSAUG00010005495) #29 sesn2 (ENSSAUG00010005510) yrk (ENSSAUG00010005555) ENSSAUG00010005575 AHDC1 (ENSSAUG00010005577) ENSSAUG00010005582 wasf2 (ENSSAUG00010005587) gpr3 (ENSSAUG00010005593) ENSSAUG00010005595 Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Midas cichlid MODERN SPECIES 1257 TINAGL1 (ENSACIG00000019865) #19 cfap300 (ENSACIG00000019886) KCNQ4 (ENSACIG00000019926) nfyc (ENSACIG00000019950) RPRD1A (ENSACIG00000019980) fkbp9 (ENSACIG00000019991) crtap (ENSACIG00000020022) ENSACIG00000020151 fbxl2 (ENSACIG00000020167) ENSACIG00000020193 clasp2 (ENSACIG00000020207) ubp1 (ENSACIG00000020276) pdcd6ip (ENSACIG00000020302) cyhr1 (ENSACIG00000020337) ENSACIG00000020355 fabp3 (ENSACIG00000020437) #22 zcchc17 (ENSACIG00000020915) #23 snrnp40 (ENSACIG00000020980) #24 nkain1 (ENSACIG00000020994) #25 pum1 (ENSACIG00000021013) #26 SDC3 (ENSACIG00000021045) #27 matn1 (ENSACIG00000021057) #29 sesn2 (ENSACIG00000021080) yrk (ENSACIG00000021107) AHDC1 (ENSACIG00000021132) wasf2 (ENSACIG00000021139) gpr3 (ENSACIG00000021155) ENSACIG00000021166 sytl1 (ENSACIG00000021196) rbm48 (ENSACIG00000021495) efcab1 (ENSACIG00000021546) Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445.e ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Nile tilapia MODERN SPECIES 13 cfap300 (ENSONIG00000002387) KCNQ4 (ENSONIG00000002385) nfyc (ENSONIG00000002373) ENSONIG00000040100 RPRD1A (ENSONIG00000002368) fkbp9 (ENSONIG00000002364) crtap (ENSONIG00000002363) ENSONIG00000002361 fbxl2 (ENSONIG00000002355) clasp2 (ENSONIG00000002323) ubp1 (ENSONIG00000002320) pdcd6ip (ENSONIG00000002317) ENSONIG00000002315 cyhr1 (ENSONIG00000002313) ENSONIG00000029139 fabp3 (ENSONIG00000040251) #22 zcchc17 (ENSONIG00000031036) #23 snrnp40 (ENSONIG00000002305) #24 nkain1 (ENSONIG00000002303) #25 pum1 (ENSONIG00000002290) #26 SDC3 (ENSONIG00000041022) #27 ENSONIG00000036823 matn1 (ENSONIG00000002278) #29 sesn2 (ENSONIG00000002274) yrk (ENSONIG00000002248) AHDC1 (ENSONIG00000022711) ENSONIG00000038803 wasf2 (ENSONIG00000002236) gpr3 (ENSONIG00000020846) ENSONIG00000038865 sytl1 (ENSONIG00000002228) Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445.e ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Haplochromini ANCESTRAL SPECIES 5 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445.e ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000160023 #19 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445.e ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.A ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445.e ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000155843 Zebra mbuna MODERN SPECIES 1104 KCNQ4 (ENSMZEG00005005425) nfyc (ENSMZEG00005005451) ENSMZEG00005005503 RPRD1A (ENSMZEG00005005518) ENSMZEG00005005529 fkbp9 (ENSMZEG00005005536) crtap (ENSMZEG00005005549) ENSMZEG00005005568 fbxl2 (ENSMZEG00005005587) ENSMZEG00005005615 clasp2 (ENSMZEG00005005622) ubp1 (ENSMZEG00005005665) pdcd6ip (ENSMZEG00005005702) cyhr1 (ENSMZEG00005005727) ENSMZEG00005005750 fabp3 (ENSMZEG00005005765) #22 zcchc17 (ENSMZEG00005005784) #23 snrnp40 (ENSMZEG00005005797) #24 nkain1 (ENSMZEG00005005810) #25 pum1 (ENSMZEG00005005834) #26 ENSMZEG00005005900 #27 ENSMZEG00005005916 matn1 (ENSMZEG00005005935) #29 sesn2 (ENSMZEG00005005978) yrk (ENSMZEG00005006002) AHDC1 (ENSMZEG00005006063) ENSMZEG00005006079 wasf2 (ENSMZEG00005006089) gpr3 (ENSMZEG00005006118) ENSMZEG00005006129 ENSMZEG00005006139 Eastern happy MODERN SPECIES 13 KCNQ4 (ENSACLG00000018427) nfyc (ENSACLG00000018486) ENSACLG00000018542 RPRD1A (ENSACLG00000018571) ENSACLG00000018626 fkbp9 (ENSACLG00000018661) crtap (ENSACLG00000018729) ENSACLG00000018751 fbxl2 (ENSACLG00000018784) ENSACLG00000018853 clasp2 (ENSACLG00000018864) ubp1 (ENSACLG00000018955) pdcd6ip (ENSACLG00000019017) cyhr1 (ENSACLG00000019052) ENSACLG00000019088 fabp3 (ENSACLG00000019164) #22 zcchc17 (ENSACLG00000019174) #23 snrnp40 (ENSACLG00000019198) #24 nkain1 (ENSACLG00000019271) #25 ENSACLG00000019342 pum1 (ENSACLG00000019354) #26 SDC3 (ENSACLG00000019403) #27 ENSACLG00000019430 matn1 (ENSACLG00000019461) #29 sesn2 (ENSACLG00000019538) yrk (ENSACLG00000019592) AHDC1 (ENSACLG00000019654) ENSACLG00000019695 wasf2 (ENSACLG00000019704) gpr3 (ENSACLG00000019717) ENSACLG00000019748 P. nyererei MODERN SPECIES 323 TINAGL1 (ENSPNYG00000010424) #19 cfap300 (ENSPNYG00000010375) KCNQ4 (ENSPNYG00000010332) nfyc (ENSPNYG00000010254) RPRD1A (ENSPNYG00000010221) fkbp9 (ENSPNYG00000010146) crtap (ENSPNYG00000010124) ENSPNYG00000010102 fbxl2 (ENSPNYG00000010086) ENSPNYG00000010075 clasp2 (ENSPNYG00000009999) ubp1 (ENSPNYG00000009934) pdcd6ip (ENSPNYG00000009865) cyhr1 (ENSPNYG00000009822) ENSPNYG00000009796 fabp3 (ENSPNYG00000009774) #22 zcchc17 (ENSPNYG00000009648) #23 snrnp40 (ENSPNYG00000009590) #24 nkain1 (ENSPNYG00000009573) #25 pum1 (ENSPNYG00000009518) #26 SDC3 (ENSPNYG00000009499) #27 matn1 (ENSPNYG00000009467) #29 sesn2 (ENSPNYG00000009443) yrk (ENSPNYG00000009397) AHDC1 (ENSPNYG00000009375) wasf2 (ENSPNYG00000009358) gpr3 (ENSPNYG00000009348) ENSPNYG00000009332 sytl1 (ENSPNYG00000009297) ENSPNYG00000009244 rbm48 (ENSPNYG00000009226) Burton s mouthbrooder MODERN SPECIES 420 fkbp9 (ENSHBUG00000018193) crtap (ENSHBUG00000018229) ENSHBUG00000018267 fbxl2 (ENSHBUG00000018295) ENSHBUG00000018307 clasp2 (ENSHBUG00000018396) ubp1 (ENSHBUG00000018427) pdcd6ip (ENSHBUG00000018493) ENSHBUG00000018525 cyhr1 (ENSHBUG00000018564) ENSHBUG00000018600 fabp3 (ENSHBUG00000018630) #22 zcchc17 (ENSHBUG00000018638) #23 snrnp40 (ENSHBUG00000018648) #24 nkain1 (ENSHBUG00000018655) #25 pum1 (ENSHBUG00000018718) #26 SDC3 (ENSHBUG00000018726) #27 ENSHBUG00000018741 matn1 (ENSHBUG00000018779) #29 sesn2 (ENSHBUG00000018793) yrk (ENSHBUG00000018891) AHDC1 (ENSHBUG00000018918) ENSHBUG00000018932 wasf2 (ENSHBUG00000018965) gpr3 (ENSHBUG00000018989) ENSHBUG00000018995 ENSHBUG00000019006 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 302 cfap300 (ENSNBRG00000011441) KCNQ4 (ENSNBRG00000011392) nfyc (ENSNBRG00000011317) ENSNBRG00000011302 RPRD1A (ENSNBRG00000011271) fkbp9 (ENSNBRG00000011237) crtap (ENSNBRG00000011216) ENSNBRG00000011187 fbxl2 (ENSNBRG00000011161) ENSNBRG00000011151 clasp2 (ENSNBRG00000011064) ubp1 (ENSNBRG00000010962) pdcd6ip (ENSNBRG00000010918) cyhr1 (ENSNBRG00000010900) ENSNBRG00000010843 fabp3 (ENSNBRG00000010816) #22 zcchc17 (ENSNBRG00000010797) #23 snrnp40 (ENSNBRG00000010763) #24 nkain1 (ENSNBRG00000010742) #25 pum1 (ENSNBRG00000010689) #26 SDC3 (ENSNBRG00000010675) #27 matn1 (ENSNBRG00000010639) #29 sesn2 (ENSNBRG00000010615) yrk (ENSNBRG00000010599) AHDC1 (ENSNBRG00000010575) wasf2 (ENSNBRG00000010545) gpr3 (ENSNBRG00000010526) ENSNBRG00000010509 ENSNBRG00000010494 rbm48 (ENSNBRG00000010483) efcab1 (ENSNBRG00000010436) Lyretail cichlid MODERN SPECIES 933 fabp3 (ENSNBRG00000007927) #22 Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Amphiprion ANCESTRAL SPECIES 16 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Orange clownfish MODERN SPECIES 8 KCNQ4 (ENSAPEG00000013703) nfyc (ENSAPEG00000013755) ENSAPEG00000013806 RPRD1A (ENSAPEG00000013832) fkbp9 (ENSAPEG00000013853) crtap (ENSAPEG00000013897) ENSAPEG00000013933 fbxl2 (ENSAPEG00000013957) ENSAPEG00000013984 clasp2 (ENSAPEG00000014025) ubp1 (ENSAPEG00000014146) pdcd6ip (ENSAPEG00000014219) ENSAPEG00000014325 cyhr1 (ENSAPEG00000014374) ENSAPEG00000014406 fabp3 (ENSAPEG00000014441) #22 zcchc17 (ENSAPEG00000014460) #23 snrnp40 (ENSAPEG00000014482) #24 nkain1 (ENSAPEG00000014505) #25 pum1 (ENSAPEG00000014550) #26 SDC3 (ENSAPEG00000014671) #27 matn1 (ENSAPEG00000014686) #29 sesn2 (ENSAPEG00000014729) yrk (ENSAPEG00000014809) ENSAPEG00000014881 ENSAPEG00000014957 wasf2 (ENSAPEG00000014969) gpr3 (ENSAPEG00000014986) ENSAPEG00000015000 efcab1 (ENSAPEG00000015021) rbm48 (ENSAPEG00000015063) Clown anemonefish MODERN SPECIES 1714 KCNQ4 (ENSAOCG00000003594) nfyc (ENSAOCG00000003630) ENSAOCG00000003645 RPRD1A (ENSAOCG00000003657) fkbp9 (ENSAOCG00000003677) crtap (ENSAOCG00000003683) ENSAOCG00000003703 fbxl2 (ENSAOCG00000003718) ENSAOCG00000002694 clasp2 (ENSAOCG00000003757) ubp1 (ENSAOCG00000003792) pdcd6ip (ENSAOCG00000003825) ENSAOCG00000003840 cyhr1 (ENSAOCG00000003852) ENSAOCG00000003865 fabp3 (ENSAOCG00000003875) #22 zcchc17 (ENSAOCG00000003880) #23 snrnp40 (ENSAOCG00000003898) #24 nkain1 (ENSAOCG00000003914) #25 pum1 (ENSAOCG00000003944) #26 Spiny chromis MODERN SPECIES 336 fbxl2 (ENSAPOG00000022354) clasp2 (ENSAPOG00000022260) ubp1 (ENSAPOG00000021986) pdcd6ip (ENSAPOG00000021926) ENSAPOG00000021873 cyhr1 (ENSAPOG00000021811) ENSAPOG00000021766 fabp3 (ENSAPOG00000021755) #22 zcchc17 (ENSAPOG00000021724) #23 snrnp40 (ENSAPOG00000021710) #24 nkain1 (ENSAPOG00000000615) #25 pum1 (ENSAPOG00000021632) #26 SDC3 (ENSAPOG00000021526) #27 matn1 (ENSAPOG00000021505) #29 sesn2 (ENSAPOG00000021467) yrk (ENSAPOG00000021415) AHDC1 (ENSAPOG00000021368) ENSAPOG00000021354 wasf2 (ENSAPOG00000021335) gpr3 (ENSAPOG00000021322) sytl1 (ENSAPOG00000021310) efcab1 (ENSAPOG00000021278) rbm48 (ENSAPOG00000021259) Bicolor damselfish MODERN SPECIES 910 pdcd6ip (ENSSPAG00000016883) ENSSPAG00000016856 cyhr1 (ENSSPAG00000016837) ENSSPAG00000016817 fabp3 (ENSSPAG00000016809) #22 zcchc17 (ENSSPAG00000016785) #23 snrnp40 (ENSSPAG00000016742) #24 nkain1 (ENSSPAG00000016711) #25 pum1 (ENSSPAG00000016636) #26 SDC3 (ENSSPAG00000016621) #27 matn1 (ENSSPAG00000016599) #29 sesn2 (ENSSPAG00000016579) yrk (ENSSPAG00000016541) AHDC1 (ENSSPAG00000016527) ENSSPAG00000016515 wasf2 (ENSSPAG00000016506) gpr3 (ENSSPAG00000016491) sytl1 (ENSSPAG00000016473) efcab1 (ENSSPAG00000016417) rbm48 (ENSSPAG00000016398) Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Oryzias ANCESTRAL SPECIES 22 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079.h #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 Oryzias_a ANCESTRAL SPECIES 18 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079.h #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 Japanese Medaka HdrR MODERN SPECIES 2 KCNQ4 (ENSORLG00000012041) nfyc (ENSORLG00000012000) ENSORLG00000011943 RPRD1A (ENSORLG00000011917) dnal1 (ENSORLG00000011890) fkbp9 (ENSORLG00000011880) crtap (ENSORLG00000011852) ENSORLG00000027239 fbxl2 (ENSORLG00000011797) clasp2 (ENSORLG00000011760) ubp1 (ENSORLG00000011706) pdcd6ip (ENSORLG00000011651) ENSORLG00000011606 cyhr1 (ENSORLG00000011594) ENSORLG00000011581 fabp3 (ENSORLG00000011573) #22 zcchc17 (ENSORLG00000011563) #23 snrnp40 (ENSORLG00000011539) #24 nkain1 (ENSORLG00000022267) #25 pum1 (ENSORLG00000011482) #26 SDC3 (ENSORLG00000026192) #27 ENSORLG00000028896 matn1 (ENSORLG00000011158) #29 sesn2 (ENSORLG00000011116) yrk (ENSORLG00000011084) AHDC1 (ENSORLG00000026505) ENSORLG00000029572 wasf2 (ENSORLG00000011056) gpr3 (ENSORLG00000011034) sytl1 (ENSORLG00000011030) efcab1 (ENSORLG00000011017) Chinese medaka MODERN SPECIES 13 ENSOSIG00000006483 RPRD1A (ENSOSIG00000006488) dnal1 (ENSOSIG00000006492) fkbp9 (ENSOSIG00000006497) crtap (ENSOSIG00000006684) ENSOSIG00000006685 ENSOSIG00000006686 fbxl2 (ENSOSIG00000006691) clasp2 (ENSOSIG00000006729) zcchc17 (ENSOSIG00000008189) #23 ubp1 (ENSOSIG00000008221) pdcd6ip (ENSOSIG00000011247) ENSOSIG00000011259 cyhr1 (ENSOSIG00000011264) ENSOSIG00000011279 fabp3 (ENSOSIG00000012052) #22 snrnp40 (ENSOSIG00000012057) #24 nkain1 (ENSOSIG00000012738) #25 pum1 (ENSOSIG00000012797) #26 SDC3 (ENSOSIG00000015985) #27 ENSOSIG00000015986 matn1 (ENSOSIG00000015987) #29 sesn2 (ENSOSIG00000015988) yrk (ENSOSIG00000016005) AHDC1 (ENSOSIG00000017214) ENSOSIG00000017215 wasf2 (ENSOSIG00000017216) gpr3 (ENSOSIG00000017218) sytl1 (ENSOSIG00000017220) efcab1 (ENSOSIG00000017221) rbm48 (ENSOSIG00000017223) Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000175655 ENSGT00940000158079.h #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 ENSGT00550000075032 Javanese ricefish MODERN SPECIES 2 KCNQ4 (ENSOJAG00000012989) nfyc (ENSOJAG00000013876) ENSOJAG00000014033 RPRD1A (ENSOJAG00000014045) dnal1 (ENSOJAG00000014068) fkbp9 (ENSOJAG00000014101) crtap (ENSOJAG00000014314) ENSOJAG00000014328 fbxl2 (ENSOJAG00000014384) clasp2 (ENSOJAG00000014769) ubp1 (ENSOJAG00000016569) pdcd6ip (ENSOJAG00000016848) ENSOJAG00000016911 cyhr1 (ENSOJAG00000016981) ENSOJAG00000017012 fabp3 (ENSOJAG00000017031) #22 zcchc17 (ENSOJAG00000001627) #23 snrnp40 (ENSOJAG00000001749) #24 nkain1 (ENSOJAG00000001884) #25 pum1 (ENSOJAG00000002521) #26 ENSOJAG00000005385 #27 matn1 (ENSOJAG00000005406) #29 sesn2 (ENSOJAG00000005447) yrk (ENSOJAG00000005571) ENSOJAG00000005716 wasf2 (ENSOJAG00000005733) gpr3 (ENSOJAG00000005759) sytl1 (ENSOJAG00000005794) efcab1 (ENSOJAG00000005836) rbm48 (ENSOJAG00000005852) ENSOJAG00000006233 Indian medaka MODERN SPECIES 3 KCNQ4 (ENSOMEG00000010348) nfyc (ENSOMEG00000010270) ENSOMEG00000010192 RPRD1A (ENSOMEG00000010157) ENSOMEG00000010121 fkbp9 (ENSOMEG00000010099) crtap (ENSOMEG00000010081) ENSOMEG00000010051 fbxl2 (ENSOMEG00000000241) clasp2 (ENSOMEG00000009947) ubp1 (ENSOMEG00000009863) pdcd6ip (ENSOMEG00000009710) ENSOMEG00000009631 cyhr1 (ENSOMEG00000009594) ENSOMEG00000009551 fabp3 (ENSOMEG00000009508) #22 zcchc17 (ENSOMEG00000009464) #23 snrnp40 (ENSOMEG00000009419) #24 nkain1 (ENSOMEG00000009358) #25 ENSOMEG00000009335 pum1 (ENSOMEG00000009312) #26 SDC3 (ENSOMEG00000009263) #27 ENSOMEG00000009228 matn1 (ENSOMEG00000009191) #29 sesn2 (ENSOMEG00000009161) yrk (ENSOMEG00000009132) AHDC1 (ENSOMEG00000009078) ENSOMEG00000009051 wasf2 (ENSOMEG00000009029) gpr3 (ENSOMEG00000009008) ENSOMEG00000008987 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000159968 Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000165470 Poecilia ANCESTRAL SPECIES 24 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000165470 NAME_6 ANCESTRAL SPECIES 21 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000165470 ENSGT00390000004541 Sailfin molly MODERN SPECIES 1458 pdcd6ip (ENSPLAG00000006937) ENSPLAG00000006973 cyhr1 (ENSPLAG00000007004) ENSPLAG00000007059 fabp3 (ENSPLAG00000007087) #22 zcchc17 (ENSPLAG00000007114) #23 snrnp40 (ENSPLAG00000007141) #24 nkain1 (ENSPLAG00000007162) #25 pum1 (ENSPLAG00000007256) #26 SDC3 (ENSPLAG00000007265) #27 ENSPLAG00000007273 matn1 (ENSPLAG00000007295) #29 Amazon molly MODERN SPECIES 273 nfyc (ENSPFOG00000009785) ENSPFOG00000009758 RPRD1A (ENSPFOG00000009698) ENSPFOG00000022972 dnal1 (ENSPFOG00000009636) fkbp9 (ENSPFOG00000009499) crtap (ENSPFOG00000009354) ENSPFOG00000009319 fbxl2 (ENSPFOG00000009205) clasp2 (ENSPFOG00000008615) ubp1 (ENSPFOG00000008378) pdcd6ip (ENSPFOG00000008147) ENSPFOG00000008096 cyhr1 (ENSPFOG00000008037) ENSPFOG00000008018 fabp3 (ENSPFOG00000007975) #22 zcchc17 (ENSPFOG00000007896) #23 snrnp40 (ENSPFOG00000007663) #24 nkain1 (ENSPFOG00000024013) #25 pum1 (ENSPFOG00000007289) #26 SDC3 (ENSPFOG00000007251) #27 ENSPFOG00000022548 ENSPFOG00000021771 matn1 (ENSPFOG00000007107) #29 sesn2 (ENSPFOG00000007014) yrk (ENSPFOG00000006894) ENSPFOG00000022762 ENSPFOG00000006884 wasf2 (ENSPFOG00000006805) gpr3 (ENSPFOG00000020064) sytl1 (ENSPFOG00000006726) Guppy MODERN SPECIES 441 cfap300 (ENSPREG00000005910) KCNQ4 (ENSPREG00000005859) nfyc (ENSPREG00000005805) ENSPREG00000005783 RPRD1A (ENSPREG00000005762) dnal1 (ENSPREG00000005740) fkbp9 (ENSPREG00000005728) crtap (ENSPREG00000005707) ENSPREG00000005667 fbxl2 (ENSPREG00000005611) clasp2 (ENSPREG00000005520) ubp1 (ENSPREG00000005474) pdcd6ip (ENSPREG00000005420) cyhr1 (ENSPREG00000005377) ENSPREG00000005350 fabp3 (ENSPREG00000005333) #22 zcchc17 (ENSPREG00000005325) #23 snrnp40 (ENSPREG00000005289) #24 nkain1 (ENSPREG00000005269) #25 pum1 (ENSPREG00000005195) #26 SDC3 (ENSPREG00000005172) #27 ENSPREG00000005136 matn1 (ENSPREG00000005069) #29 sesn2 (ENSPREG00000005042) yrk (ENSPREG00000005009) AHDC1 (ENSPREG00000004999) wasf2 (ENSPREG00000004977) gpr3 (ENSPREG00000004960) ENSPREG00000004949 sytl1 (ENSPREG00000004917) ENSPREG00000004820 Platyfish MODERN SPECIES 4 ENSXMAG00000003178 RPRD1A (ENSXMAG00000003172) dnal1 (ENSXMAG00000028736) fkbp9 (ENSXMAG00000003160) crtap (ENSXMAG00000003153) ENSXMAG00000029488 ENSXMAG00000026756 fbxl2 (ENSXMAG00000003112) ENSXMAG00000022442 clasp2 (ENSXMAG00000003043) ubp1 (ENSXMAG00000003023) pdcd6ip (ENSXMAG00000003000) ENSXMAG00000002994 cyhr1 (ENSXMAG00000002990) ENSXMAG00000002989 fabp3 (ENSXMAG00000002986) #22 zcchc17 (ENSXMAG00000002980) #23 snrnp40 (ENSXMAG00000002970) #24 nkain1 (ENSXMAG00000002965) #25 pum1 (ENSXMAG00000002945) #26 SDC3 (ENSXMAG00000026274) #27 ENSXMAG00000027994 matn1 (ENSXMAG00000002933) #29 sesn2 (ENSXMAG00000002916) yrk (ENSXMAG00000002890) AHDC1 (ENSXMAG00000029670) ENSXMAG00000002889 wasf2 (ENSXMAG00000002885) gpr3 (ENSXMAG00000020329) sytl1 (ENSXMAG00000002876) rbm48 (ENSXMAG00000002869) NAME_4 ANCESTRAL SPECIES 10 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b.f ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000160932 ENSGT00940000159968 ENSGT00390000004541 Mummichog MODERN SPECIES 270 ENSFHEG00000009208 clasp2 (ENSFHEG00000009148) ubp1 (ENSFHEG00000008116) pdcd6ip (ENSFHEG00000007980) ENSFHEG00000007936 cyhr1 (ENSFHEG00000007922) ENSFHEG00000007886 fabp3 (ENSFHEG00000007868) #22 ENSFHEG00000007859 zcchc17 (ENSFHEG00000007848) #23 snrnp40 (ENSFHEG00000007838) #24 nkain1 (ENSFHEG00000007803) #25 pum1 (ENSFHEG00000007765) #26 SDC3 (ENSFHEG00000007728) #27 ENSFHEG00000007720 matn1 (ENSFHEG00000007713) #29 sesn2 (ENSFHEG00000007656) yrk (ENSFHEG00000000198) ENSFHEG00000007617 ENSFHEG00000007610 ENSFHEG00000000750 gpr3 (ENSFHEG00000007599) ENSFHEG00000007594 Sheepshead minnow MODERN SPECIES 183 KCNQ4 (ENSCVAG00000007920) nfyc (ENSCVAG00000007788) ENSCVAG00000007740 RPRD1A (ENSCVAG00000007732) dnal1 (ENSCVAG00000007704) fkbp9 (ENSCVAG00000007686) crtap (ENSCVAG00000007675) ENSCVAG00000007654 fbxl2 (ENSCVAG00000007633) clasp2 (ENSCVAG00000007610) ubp1 (ENSCVAG00000000202) pdcd6ip (ENSCVAG00000007264) ENSCVAG00000007202 cyhr1 (ENSCVAG00000007158) ENSCVAG00000007135 fabp3 (ENSCVAG00000007119) #22 zcchc17 (ENSCVAG00000007112) #23 snrnp40 (ENSCVAG00000007097) #24 nkain1 (ENSCVAG00000007059) #25 pum1 (ENSCVAG00000007043) #26 SDC3 (ENSCVAG00000006999) #27 matn1 (ENSCVAG00000006992) #29 sesn2 (ENSCVAG00000006945) yrk (ENSCVAG00000006923) AHDC1 (ENSCVAG00000006908) ENSCVAG00000006898 wasf2 (ENSCVAG00000006891) gpr3 (ENSCVAG00000006879) sytl1 (ENSCVAG00000006868) efcab1 (ENSCVAG00000006841) rbm48 (ENSCVAG00000006833) Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 ENSGT00940000155843 Mangrove rivulus MODERN SPECIES 2 cfap300 (ENSKMAG00000004758) KCNQ4 (ENSKMAG00000004704) nfyc (ENSKMAG00000004636) RPRD1A (ENSKMAG00000004597) dnal1 (ENSKMAG00000004577) fkbp9 (ENSKMAG00000004544) crtap (ENSKMAG00000004531) ENSKMAG00000004514 fbxl2 (ENSKMAG00000004442) clasp2 (ENSKMAG00000004284) ubp1 (ENSKMAG00000004223) pdcd6ip (ENSKMAG00000004128) ENSKMAG00000004052 cyhr1 (ENSKMAG00000004026) ENSKMAG00000003756 fabp3 (ENSKMAG00000003677) #22 zcchc17 (ENSKMAG00000003662) #23 snrnp40 (ENSKMAG00000003625) #24 nkain1 (ENSKMAG00000003596) #25 pum1 (ENSKMAG00000003481) #26 SDC3 (ENSKMAG00000003443) #27 ENSKMAG00000003427 matn1 (ENSKMAG00000003359) #29 sesn2 (ENSKMAG00000003324) yrk (ENSKMAG00000003276) ENSKMAG00000003258 ENSKMAG00000003243 ENSKMAG00000003223 gpr3 (ENSKMAG00000003208) ENSKMAG00000003182 efcab1 (ENSKMAG00000003150) Turquoise killifish MODERN SPECIES 1628 NFYC (ENSNFUG00015020051) ENSNFUG00015020066 RPRD1A (ENSNFUG00015020073) ENSNFUG00015020094 DNAL1 (ENSNFUG00015020100) fkbp9 (ENSNFUG00015020111) crtap (ENSNFUG00015020158) ENSNFUG00015020165 fbxl2 (ENSNFUG00015020172) clasp2 (ENSNFUG00015020334) ubp1 (ENSNFUG00015021591) PDCD6IP (ENSNFUG00015021638) ARPP21 (ENSNFUG00015021713) CYHR1 (ENSNFUG00015021722) ENSNFUG00015021728 FABP3 (ENSNFUG00015021917) #22 zcchc17 (ENSNFUG00015021919) #23 SNRNP40 (ENSNFUG00015021920) #24 NKAIN1 (ENSNFUG00015021931) #25 pum1 (ENSNFUG00015021955) #26 SDC3 (ENSNFUG00015022277) #27 matn1 (ENSNFUG00015022282) #29 MATN1 (ENSNFUG00015022287) yrk (ENSNFUG00015022291) AHDC1 (ENSNFUG00015022322) WASF2 (ENSNFUG00015022325) gpr3 (ENSNFUG00015022328) ENSNFUG00015022332 sytl1 (ENSNFUG00015022342) CLEP (ENSNFUG00015022351) gnb3b (ENSNFUG00015022355) Pinecone sodierfish MODERN SPECIES 2 cfap300 (ENSMMDG00005004822) KCNQ4 (ENSMMDG00005004827) nfyc (ENSMMDG00005004862) ENSMMDG00005005350 RPRD1A (ENSMMDG00005005356) fkbp9 (ENSMMDG00005005387) crtap (ENSMMDG00005005477) ENSMMDG00005005478 fbxl2 (ENSMMDG00005005496) clasp2 (ENSMMDG00005006593) ubp1 (ENSMMDG00005023022) pdcd6ip (ENSMMDG00005023041) ENSMMDG00005023046 cyhr1 (ENSMMDG00005023048) ENSMMDG00005023051 fabp3 (ENSMMDG00005023052) #22 zcchc17 (ENSMMDG00005023054) #23 snrnp40 (ENSMMDG00005023056) #24 nkain1 (ENSMMDG00005023060) #25 pum1 (ENSMMDG00005023136) #26 SDC3 (ENSMMDG00005024225) #27 ENSMMDG00005024227 matn1 (ENSMMDG00005024230) #29 sesn2 (ENSMMDG00005024231) yrk (ENSMMDG00005024234) AHDC1 (ENSMMDG00005024241) wasf2 (ENSMMDG00005024242) gpr3 (ENSMMDG00005024243) sytl1 (ENSMMDG00005024244) ENSMMDG00005024247 efcab1 (ENSMMDG00005024248) Cod MODERN SPECIES 14 ENSGMOG00000017358 ENSGMOG00000000124 ENSGMOG00000000118 ENSGMOG00000027623 ENSGMOG00000000099 ENSGMOG00000027900 fkbp9 (ENSGMOG00000014984) crtap (ENSGMOG00000014964) ENSGMOG00000028998 fbxl2 (ENSGMOG00000010295) clasp2 (ENSGMOG00000010321) ubp1 (ENSGMOG00000010354) pdcd6ip (ENSGMOG00000010373) cyhr1 (ENSGMOG00000010429) ENSGMOG00000010440 fabp3 (ENSGMOG00000010446) #22 zcchc17 (ENSGMOG00000010452) #23 snrnp40 (ENSGMOG00000010466) #24 nkain1 (ENSGMOG00000010477) #25 pum1 (ENSGMOG00000010491) #26 ENSGMOG00000029918 #27 ENSGMOG00000031112 matn1 (ENSGMOG00000028455) #29 ENSGMOG00000015579 yrk (ENSGMOG00000036856) ENSGMOG00000006844 ENSGMOG00000006858 ENSGMOG00000026484 pex1 (ENSGMOG00000006887) elmo1 (ENSGMOG00000006928) rp9 (ENSGMOG00000000528) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000165758 ENSGT00940000164175.b ENSGT00940000159342.a ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00950000182824.a.b.b.d ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT01000000220517 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160932 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 572 ENSGT00940000163083.k.b ENSGT00390000018258.o.b ENSGT00950000182824.a.b.b.d.e ENSGT00940000155104.g #22 ENSGT00940000155058.t #24 ENSGT00940000159949.a #25 ENSGT00940000158079.d #26 ENSGT00940000160209.d.a #27 ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT01060000248564.b.a.a.a.c ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b ENSGT00390000016277.a.l.b ENSGT00390000007888.h Huchen MODERN SPECIES 2492 ENSHHUG00000036394 ENSHHUG00000036397 fabp3 (ENSHHUG00000036399) #22 snrnp40 (ENSHHUG00000036418) #24 nkain1 (ENSHHUG00000036436) #25 pum1 (ENSHHUG00000036441) #26 SDC3 (ENSHHUG00000036457) #27 Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.a ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00390000017352 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e ENSGT00390000009163.i.b ENSGT00940000153845.a.b.b ENSGT00940000155574.C.m.b ENSGT00940000156148.c.b ENSGT00940000163083.k.a.a ENSGT00940000163083.k.b ENSGT00390000018258.o.b ENSGT00940000155104.g #22 ENSGT00940000155058.t #24 ENSGT00940000159949.a #25 ENSGT00940000158079.d #26 ENSGT00940000160209.d.a #27 ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT01060000248564.b.a.a.a.c ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b ENSGT00390000016277.a.l.b ENSGT00390000007888.h ENSGT00940000156213.q.b.a #32 ENSGT00530000063698.b.k.b #33 Salmo ANCESTRAL SPECIES 2 ENSGT00390000013823.a.m.a.a ENSGT00390000018500.b.b.b.d ENSGT00500000045044.f ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.b ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00940000157125.e ENSGT00940000153814.a.e ENSGT00940000153845.a.b.b ENSGT00940000155574.C.m.b ENSGT00940000156148.c.b ENSGT00940000163083.k.b ENSGT00390000018258.o.b ENSGT00950000182824.a.b.b.d.e ENSGT00940000155104.g #22 ENSGT00940000155058.t #24 ENSGT00940000159949.a #25 ENSGT00940000158079.d #26 ENSGT00940000160209.d.a #27 ENSGT00940000157554.cb.a ENSGT00950000182962.b.a.d ENSGT01060000248564.b.a.a.a.c ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b ENSGT00390000016277.a.l.b ENSGT00390000007888.h ENSGT00940000156213.q.a.a.a.a #32 ENSGT00530000063698.b.k.b #33 ENSGT00940000157833.h.a.c.a #34 River trout MODERN SPECIES 29 ENSSTUG00000044703 ENSSTUG00000044693 mturn (ENSSTUG00000044686) znrf2a (ENSSTUG00000044673) snrpd1 (ENSSTUG00000044665) ENSSTUG00000044652 fam83hb (ENSSTUG00000044632) ENSSTUG00000044621 crtap (ENSSTUG00000044609) fbxl2 (ENSSTUG00000044488) clasp2 (ENSSTUG00000037990) pdcd6ip (ENSSTUG00000037612) cyhr1 (ENSSTUG00000037586) ENSSTUG00000037579 ENSSTUG00000037570 fabp3 (ENSSTUG00000037556) #22 snrnp40 (ENSSTUG00000037497) #24 nkain1 (ENSSTUG00000046468) #25 pum1 (ENSSTUG00000046179) #26 SDC3 (ENSSTUG00000046144) #27 yrk (ENSSTUG00000044851) TRIM71 (ENSSTUG00000044804) ABHD5 (ENSSTUG00000044794) rpl14 (ENSSTUG00000044741) ENSSTUG00000044734 #32 srsf4 (ENSSTUG00000044726) #32 ENSSTUG00000044720 #33 ENSSTUG00000044713 ENSSTUG00000044690 ccn2b (ENSSTUG00000044663) stx12 (ENSSTUG00000044639) Atlantic salmon MODERN SPECIES 5 ENSSSAG00000114663 znrf2a (ENSSSAG00000083850) snrpd1 (ENSSSAG00000082275) ENSSSAG00000116002 ENSSSAG00000054585 fkbp9 (ENSSSAG00000115283) ENSSSAG00000121713 fbxl2 (ENSSSAG00000081026) ENSSSAG00000094283 clasp2 (ENSSSAG00000080762) ENSSSAG00000086880 ubp1 (ENSSSAG00000080525) pdcd6ip (ENSSSAG00000054882) cyhr1 (ENSSSAG00000054923) ENSSSAG00000053914 FABPH (ENSSSAG00000054088) #22 snrnp40 (ENSSSAG00000080354) #24 nkain1 (ENSSSAG00000054108) #25 pum1 (ENSSSAG00000082549) #26 SDC3 (ENSSSAG00000107734) #27 ENSSSAG00000091499 FGR (ENSSSAG00000118016) ENSSSAG00000054933 GPR3 (ENSSSAG00000078324) ENSSSAG00000102061 ENSSSAG00000042781 ENSSSAG00000042788 ENSSSAG00000085335 ENSSSAG00000113631 ENSSSAG00000042831 ENSSSAG00000109031 #32 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.a ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00390000017352 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e ENSGT00390000009163.i.b ENSGT00940000153845.a.b.b ENSGT00940000155574.C.m.b ENSGT00940000156148.c.b ENSGT00940000163083.k.a.a ENSGT00390000018258.o.b ENSGT00940000159476.k ENSGT00940000155104.g #22 ENSGT00940000155058.t #24 ENSGT00940000159949.a #25 ENSGT00940000158079.d #26 ENSGT00940000160209.d.a #27 ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b ENSGT00390000016277.a.l.b ENSGT00390000007888.h ENSGT00940000156213.q.b.a #32 ENSGT00530000063698.b.k.b #33 ENSGT00940000157833.h.a.c.a #34 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.a ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00390000017352 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e ENSGT00390000009163.i.b ENSGT00940000153845.a.b.b ENSGT00940000155574.C.m.b ENSGT00940000156148.c.b ENSGT00940000163083.k.a.a ENSGT00390000018258.o.b ENSGT00940000159476.k ENSGT00940000155104.g #22 ENSGT00940000155058.t #24 ENSGT00940000159949.a #25 ENSGT00940000158079.d #26 ENSGT00940000160209.d.a #27 ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT00940000160932.c.b ENSGT00940000159099.l.b ENSGT00390000016277.a.l.b ENSGT00390000007888.h ENSGT00940000156213.q.a.b #32 ENSGT00940000158275.cb ENSGT00530000063698.b.k.b #33 ENSGT00940000157833.h.a.c.a #34 Coho salmon MODERN SPECIES 5 snrpd1 (ENSOKIG00005023834) ENSOKIG00005023863 fam83hb (ENSOKIG00005023877) ENSOKIG00005023928 fkbp9 (ENSOKIG00005023972) crtap (ENSOKIG00005024000) ENSOKIG00005024060 ENSOKIG00005024079 fbxl2 (ENSOKIG00005024103) clasp2 (ENSOKIG00005024353) ubp1 (ENSOKIG00005027216) pdcd6ip (ENSOKIG00005027371) cyhr1 (ENSOKIG00005027586) ENSOKIG00005027609 ENSOKIG00005027634 fabp3 (ENSOKIG00005027664) #22 snrnp40 (ENSOKIG00005027686) #24 nkain1 (ENSOKIG00005027849) #25 pum1 (ENSOKIG00005027892) #26 SDC3 (ENSOKIG00005028114) #27 yrk (ENSOKIG00005028174) ENSOKIG00005029681 wasf2 (ENSOKIG00005029684) ENSOKIG00005029691 ENSOKIG00005029733 ENSOKIG00005029738 TRIM71 (ENSOKIG00005029766) ABHD5 (ENSOKIG00005029874) rpl14 (ENSOKIG00005029882) ENSOKIG00005029901 #32 ENSOKIG00005029886 Chinook salmon MODERN SPECIES 24 gtf2h4 (ENSOTSG00005022198) ENSOTSG00005022212 mgat1b (ENSOTSG00005022213) ppp1r11 (ENSOTSG00005022214) ENSOTSG00005022218 ENSOTSG00005022219 sacm1la (ENSOTSG00005022236) TRNAU1AP (ENSOTSG00005024561) stx12 (ENSOTSG00005024566) ENSOTSG00005024568 ENSOTSG00005024570 ENSOTSG00005024571 ENSOTSG00005002682 #27 pum1 (ENSOTSG00005003241) #26 ENSOTSG00005003253 fabp3 (ENSOTSG00005003256) #22 snrnp40 (ENSOTSG00005003265) #24 nkain1 (ENSOTSG00005003549) #25 ENSOTSG00005003550 polr1f (ENSOTSG00005003551) ENSOTSG00005003554 ENSOTSG00005003555 hey1 (ENSOTSG00005003556) stmn2b (ENSOTSG00005003557) si:dkeyp-120h9.1 (ENSOTSG00005003559) ripor2 (ENSOTSG00005003564) gmnn (ENSOTSG00005003567) ENSOTSG00005003569 trappc3 (ENSOTSG00005003576) col8a2 (ENSOTSG00005003685) ptp4a2b (ENSOTSG00005003688) #12 Rainbow trout MODERN SPECIES 24 mturn (ENSOMYG00000061799) znrf2a (ENSOMYG00000049311) snrpd1 (ENSOMYG00000075625) ENSOMYG00000059745 ENSOMYG00000053846 ENSOMYG00000006186 ENSOMYG00000006150 fkbp9 (ENSOMYG00000072994) ENSOMYG00000071938 fbxl2 (ENSOMYG00000052860) ENSOMYG00000048555 clasp2 (ENSOMYG00000074294) ubp1 (ENSOMYG00000077660) pdcd6ip (ENSOMYG00000006025) cyhr1 (ENSOMYG00000005872) fabp3 (ENSOMYG00000005893) #22 snrnp40 (ENSOMYG00000005806) #24 nkain1 (ENSOMYG00000005739) #25 ENSOMYG00000074165 ENSOMYG00000069130 pum1 (ENSOMYG00000074731) #26 SDC3 (ENSOMYG00000061113) #27 ENSOMYG00000064715 yrk (ENSOMYG00000064825) ENSOMYG00000005608 wasf2 (ENSOMYG00000074056) ENSOMYG00000072438 ENSOMYG00000059604 cck-t (ENSOMYG00000005443) ENSOMYG00000056050 ENSOMYG00000050303 Salmoninae ANCESTRAL SPECIES 65 ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f ENSGT00390000009163.j.a ENSGT00990000210357 ENSGT00390000009163.j.b.a ENSGT00940000153845.a.b.a ENSGT00940000155574.C.m.a ENSGT00940000156148.c.a ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104.h #22 ENSGT00510000047363 #23 ENSGT00940000155058.s #24 ENSGT00940000159949.b #25 ENSGT00940000158079.c #26 ENSGT00940000160209.d.b #27 ENSGT00650000093445 ENSGT00940000159638.d #29 ENSGT00940000159638.c.a #29 ENSGT00950000183168.B.a ENSGT00940000157554.cb.b ENSGT00390000018883.f ENSGT00390000002881.gc ENSGT00950000182962.b.a.c ENSGT01060000248564.b.a.a.a.d ENSGT00940000160932.d Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f ENSGT00390000009163.i.a ENSGT00990000210357 ENSGT00390000009163.j.b.a ENSGT00940000153845.a.b.a ENSGT00940000155574.C.m.a ENSGT00940000156148.c.a ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476 ENSGT00940000155104.h #22 ENSGT00510000047363 #23 ENSGT00940000155058.s #24 ENSGT00940000159949.b #25 ENSGT00940000158079.c #26 ENSGT00940000160209.d.b #27 ENSGT00650000093445 ENSGT00940000159638.d #29 ENSGT00940000159638.c.a #29 ENSGT00950000183168.B.a ENSGT00940000157554.cb.b ENSGT00390000018883.f ENSGT00390000002881.gc ENSGT00950000182962.b.a.c ENSGT01060000248564.b.a.a.a.d ENSGT00940000177340 Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f ENSGT00390000009163.i.a ENSGT00940000153845.a.b.a ENSGT00940000155574.C.m.a ENSGT00940000156148.c.a ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476.l ENSGT00940000155104.h #22 ENSGT00510000047363 #23 ENSGT00940000155058.s #24 ENSGT00940000159949.b #25 ENSGT00940000158079.c #26 ENSGT00940000160209.d.b #27 ENSGT00650000093445 ENSGT00940000159638.c.a #29 ENSGT00950000183168.B.a ENSGT00940000157554.cb.b ENSGT00390000018883.f ENSGT00390000002881.gc ENSGT00950000182962.b.a.c ENSGT01060000248564.b.a.a.a.d ENSGT00940000160932.c.a ENSGT00940000163923 Rainbow trout MODERN SPECIES 9 ENSOMYG00000043140 ENSOMYG00000043136 ENSOMYG00000052526 fkbp9 (ENSOMYG00000043116) crtap (ENSOMYG00000043111) ENSOMYG00000043100 fbxl2 (ENSOMYG00000043022) clasp2 (ENSOMYG00000041281) ubp1 (ENSOMYG00000042996) pdcd6ip (ENSOMYG00000042822) ENSOMYG00000041136 ENSOMYG00000070500 cyhr1 (ENSOMYG00000041131) ENSOMYG00000041121 ENSOMYG00000041107 fabp3 (ENSOMYG00000041099) #22 zcchc17 (ENSOMYG00000041090) #23 snrnp40 (ENSOMYG00000041070) #24 nkain1 (ENSOMYG00000041062) #25 pum1 (ENSOMYG00000040426) #26 ENSOMYG00000048712 SDC3 (ENSOMYG00000062998) #27 matn1 (ENSOMYG00000040204) #29 sesn2 (ENSOMYG00000040195) ENSOMYG00000053522 yrk (ENSOMYG00000039567) ENSOMYG00000064452 ENSOMYG00000039288 wasf2 (ENSOMYG00000039277) gpr3 (ENSOMYG00000039270) sytl1 (ENSOMYG00000039238) Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f ENSGT00390000009163.i.a ENSGT00940000153845.a.b.a ENSGT00940000155574.C.m.a ENSGT00940000156148.c.a ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476.l ENSGT00940000155104.h #22 ENSGT00510000047363 #23 ENSGT00940000155058.s #24 ENSGT00940000159949.b #25 ENSGT00940000158079.c #26 ENSGT00940000160209.d.b #27 ENSGT00650000093445 ENSGT00940000159638.c.a #29 ENSGT00950000183168.B.a ENSGT00940000157554.cb.b ENSGT00390000018883.f ENSGT00390000002881.gc ENSGT00950000182962.b.a.c ENSGT01060000248564.b.a.a.a.d ENSGT00940000160932.c.a ENSGT00940000163923 Coho salmon MODERN SPECIES 8 ENSOKIG00005010191 ENSOKIG00005010245 ENSOKIG00005010260 ENSOKIG00005010292 fkbp9 (ENSOKIG00005010298) crtap (ENSOKIG00005010314) ENSOKIG00005010340 fbxl2 (ENSOKIG00005010388) clasp2 (ENSOKIG00005011098) ubp1 (ENSOKIG00005014375) pdcd6ip (ENSOKIG00005014448) ENSOKIG00005015282 cyhr1 (ENSOKIG00005015312) ENSOKIG00005015364 ENSOKIG00005015540 fabp3 (ENSOKIG00005015577) #22 zcchc17 (ENSOKIG00005015597) #23 snrnp40 (ENSOKIG00005015620) #24 nkain1 (ENSOKIG00005015660) #25 pum1 (ENSOKIG00005015820) #26 SDC3 (ENSOKIG00005018172) #27 ENSOKIG00005018175 matn1 (ENSOKIG00005018190) #29 sesn2 (ENSOKIG00005018257) yrk (ENSOKIG00005018339) AHDC1 (ENSOKIG00005019814) wasf2 (ENSOKIG00005019824) gpr3 (ENSOKIG00005019832) sytl1 (ENSOKIG00005019839) zgc:110239 (ENSOKIG00005019866) ENSOKIG00005004274 Chinook salmon MODERN SPECIES 4 snrpd1 (ENSOTSG00005004771) ankib1a (ENSOTSG00005004776) ENSOTSG00005004779 fam83hb (ENSOTSG00005004781) fkbp9 (ENSOTSG00005004794) crtap (ENSOTSG00005004867) ENSOTSG00005004871 fbxl2 (ENSOTSG00005004878) clasp2 (ENSOTSG00005004981) ubp1 (ENSOTSG00005006036) pdcd6ip (ENSOTSG00005006063) ENSOTSG00005009164 cyhr1 (ENSOTSG00005009166) ENSOTSG00005009167 ENSOTSG00005009168 ENSOTSG00005009169 #22 zcchc17 (ENSOTSG00005009170) #23 snrnp40 (ENSOTSG00005019033) #24 nkain1 (ENSOTSG00005019048) #25 pum1 (ENSOTSG00005019083) #26 ENSOTSG00005027004 ENSOTSG00005027008 #27 matn1 (ENSOTSG00005027010) #29 sesn2 (ENSOTSG00005027011) ENSOTSG00005027013 AHDC1 (ENSOTSG00005027015) ENSOTSG00005027016 wasf2 (ENSOTSG00005027018) gpr3 (ENSOTSG00005027019) sytl1 (ENSOTSG00005027029) zgc:103438 (ENSOTSG00005027032) Salmo ANCESTRAL SPECIES 2 ENSGT00940000159342.a.f ENSGT01100000265001.a ENSGT00940000157125.f ENSGT00940000153814.a.f ENSGT00390000009163.i.a ENSGT00990000210357 ENSGT00390000009163.j.b.a ENSGT00940000153845.a.b.a ENSGT00940000155574.C.m.a ENSGT00940000156148.c.a ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476 ENSGT00940000155104.h #22 ENSGT00510000047363 #23 ENSGT00940000155058.s #24 ENSGT00940000159949.b #25 ENSGT00940000158079.c #26 ENSGT00940000160209.d.b #27 ENSGT00650000093445 ENSGT00940000159638.d #29 ENSGT00950000183168.B.a ENSGT00940000157554.cb.b ENSGT00390000018883.f ENSGT00390000002881.gc ENSGT00950000182962.b.a.c ENSGT01060000248564.b.a.a.a.d ENSGT00940000177340 ENSGT00940000160932.c.a River trout MODERN SPECIES 27 fam83hb (ENSSTUG00000036246) ENSSTUG00000036210 fkbp9 (ENSSTUG00000035685) crtap (ENSSTUG00000035653) ENSSTUG00000035646 fbxl2 (ENSSTUG00000035110) ENSSTUG00000035085 clasp2 (ENSSTUG00000032034) ubp1 (ENSSTUG00000031888) pdcd6ip (ENSSTUG00000031012) ENSSTUG00000030987 ENSSTUG00000030974 cyhr1 (ENSSTUG00000030964) ARHGAP4 (ENSSTUG00000030329) ENSSTUG00000030262 fabp3 (ENSSTUG00000030245) #22 zcchc17 (ENSSTUG00000030228) #23 snrnp40 (ENSSTUG00000030117) #24 nkain1 (ENSSTUG00000030080) #25 pum1 (ENSSTUG00000021985) #26 yrk (ENSSTUG00000020545) AHDC1 (ENSSTUG00000020414) wasf2 (ENSSTUG00000020373) gpr3 (ENSSTUG00000020370) sytl1 (ENSSTUG00000020320) zgc:110239 (ENSSTUG00000020262) ENSSTUG00000020257 ENSSTUG00000020239 ENSSTUG00000020222 TRIM71 (ENSSTUG00000020162) ENSSTUG00000020106 Huchen MODERN SPECIES 3629 fabp3 (ENSHHUG00000048382) #22 zcchc17 (ENSHHUG00000048380) #23 snrnp40 (ENSHHUG00000048368) #24 nkain1 (ENSHHUG00000048359) #25 pum1 (ENSHHUG00000047011) #26 SDC3 (ENSHHUG00000046981) #27 ENSHHUG00000046964 Northern pike MODERN SPECIES 9 snrpd1 (ENSELUG00000026849) ankib1a (ENSELUG00000000082) rtp3 (ENSELUG00000002818) fam83hb (ENSELUG00000001087) fkbp9 (ENSELUG00000002808) crtap (ENSELUG00000002788) ENSELUG00000002771 fbxl2 (ENSELUG00000002746) clasp2 (ENSELUG00000002667) ubp1 (ENSELUG00000002570) pdcd6ip (ENSELUG00000002548) ENSELUG00000002532 cyhr1 (ENSELUG00000002515) ARHGAP4 (ENSELUG00000002498) ENSELUG00000002476 fabp3 (ENSELUG00000030686) #22 zcchc17 (ENSELUG00000002450) #23 snrnp40 (ENSELUG00000002438) #24 nkain1 (ENSELUG00000002423) #25 pum1 (ENSELUG00000002409) #26 SDC3 (ENSELUG00000002387) #27 ENSELUG00000002382 matn1 (ENSELUG00000002380) #29 sesn2 (ENSELUG00000002374) yrk (ENSELUG00000002361) ENSELUG00000002344 wasf2 (ENSELUG00000002334) gpr3 (ENSELUG00000002328) ENSELUG00000002319 zgc:103438 (ENSELUG00000002304) ENSELUG00000002298 Otomorpha ANCESTRAL SPECIES 241 ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 Clupeiformes ANCESTRAL SPECIES 281 ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000155574.C ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00940000159638 #29 ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 Denticle herring MODERN SPECIES 19 ENSDCDG00000032029 ENSDCDG00000032026 ENSDCDG00000032023 ENSDCDG00000032020 ENSDCDG00000032017 ENSDCDG00000032015 crtap (ENSDCDG00000032010) fkbp9 (ENSDCDG00000032006) ENSDCDG00000032003 zgc:103438 (ENSDCDG00000031999) ENSDCDG00000031995 clasp2 (ENSDCDG00000027979) pdcd6ip (ENSDCDG00000027567) cyhr1 (ENSDCDG00000027565) ENSDCDG00000027563 fabp3 (ENSDCDG00000027562) #22 zcchc17 (ENSDCDG00000027561) #23 snrnp40 (ENSDCDG00000027533) #24 nkain1 (ENSDCDG00000027531) #25 pum1 (ENSDCDG00000026845) #26 SDC3 (ENSDCDG00000026799) #27 matn1 (ENSDCDG00000026793) #29 yrk (ENSDCDG00000022794) ENSDCDG00000022721 AHDC1 (ENSDCDG00000022720) wasf2 (ENSDCDG00000022715) gpr3 (ENSDCDG00000022706) ENSDCDG00000022700 ENSDCDG00000022696 kat2b (ENSDCDG00000022584) ENSDCDG00000022563 Atlantic herring MODERN SPECIES 10 hpcal4 (ENSCHAG00000002790) fam49al (ENSCHAG00000002900) trit1 (ENSCHAG00000004147) mfsd2ab (ENSCHAG00000004248) glmp (ENSCHAG00000005787) ENSCHAG00000005801 ENSCHAG00000005921 ENSCHAG00000005931 msto1 (ENSCHAG00000005962) wdyhv1 (ENSCHAG00000005976) zgc:91910 (ENSCHAG00000005991) nup98 (ENSCHAG00000006088) serpinf1 (ENSCHAG00000007940) TMEM164 (ENSCHAG00000007957) ammecr1 (ENSCHAG00000007971) fabp3 (ENSCHAG00000008015) #22 slco2b1 (ENSCHAG00000008065) ENSCHAG00000008796 Otophysi ANCESTRAL SPECIES 39 ENSGT00390000000698 ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000159476.i ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 Characiphysae ANCESTRAL SPECIES 10 ENSGT00940000164843.b ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000159476.i ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 Channel catfish MODERN SPECIES 16 psmb4 (ENSIPUG00000021163) ENSIPUG00000021152 si:dkey-228a15.1 (ENSIPUG00000021138) sytl1 (ENSIPUG00000021122) fkbp9 (ENSIPUG00000021107) CRTAP (ENSIPUG00000021081) susd5 (ENSIPUG00000021074) fbxl2 (ENSIPUG00000021044) clasp2 (ENSIPUG00000020723) ubp1 (ENSIPUG00000020657) pdcd6ip (ENSIPUG00000020591) ENSIPUG00000020552 cyhr1 (ENSIPUG00000020546) ENSIPUG00000020535 ENSIPUG00000020530 fabp3 (ENSIPUG00000020525) #22 zcchc17 (ENSIPUG00000020511) #23 snrnp40 (ENSIPUG00000020472) #24 nkain1 (ENSIPUG00000020456) #25 pum1 (ENSIPUG00000020421) #26 sdc3 (ENSIPUG00000020392) #27 nobox (ENSIPUG00000020371) LAPTM4A (ENSIPUG00000020348) matn1 (ENSIPUG00000020337) #29 sesn2 (ENSIPUG00000020323) fgr (ENSIPUG00000020219) ahdc1 (ENSIPUG00000020214) ENSIPUG00000020205 wasf2 (ENSIPUG00000020198) gpr3 (ENSIPUG00000020193) cd164l2 (ENSIPUG00000020166) Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00390000000698 ENSGT00940000164843.b ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 Electric eel MODERN SPECIES 37 ubp1 (ENSEEEG00000007583) pdcd6ip (ENSEEEG00000007746) ENSEEEG00000007750 cyhr1 (ENSEEEG00000007751) ENSEEEG00000007752 fabp3 (ENSEEEG00000007764) #22 atoh1a (ENSEEEG00000007767) grid2 (ENSEEEG00000007769) CCSER1 (ENSEEEG00000007776) trim36 (ENSEEEG00000007779) pggt1b (ENSEEEG00000007780) CCDC112 (ENSEEEG00000007784) fem1c (ENSEEEG00000007787) tmed7 (ENSEEEG00000007790) cdo1 (ENSEEEG00000007791) AP3S1 (ENSEEEG00000007792) COMMD10 (ENSEEEG00000007793) sema6a (ENSEEEG00000007795) DMXL1 (ENSEEEG00000007796) hsd17b4 (ENSEEEG00000007800) prr16 (ENSEEEG00000007843) Characoidei ANCESTRAL SPECIES 3 ENSGT00390000000698 ENSGT00940000164843.b ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 Red-bellied piranha MODERN SPECIES 1 psmb4 (ENSPNAG00000028094) ENSPNAG00000028062 si:dkey-228a15.1 (ENSPNAG00000027998) sytl1 (ENSPNAG00000027953) fkbp9 (ENSPNAG00000006917) crtap (ENSPNAG00000005901) ENSPNAG00000005380 fbxl2 (ENSPNAG00000027462) ENSPNAG00000006481 clasp2 (ENSPNAG00000027362) ubp1 (ENSPNAG00000027222) pdcd6ip (ENSPNAG00000027171) ENSPNAG00000004162 cyhr1 (ENSPNAG00000005034) DCLK3 (ENSPNAG00000026847) fabp3 (ENSPNAG00000004117) #22 zcchc17 (ENSPNAG00000026780) #23 snrnp40 (ENSPNAG00000026769) #24 nkain1 (ENSPNAG00000026733) #25 pum1 (ENSPNAG00000026728) #26 SDC3 (ENSPNAG00000007081) #27 ENSPNAG00000026558 ENSPNAG00000026544 matn1 (ENSPNAG00000007138) #29 sesn2 (ENSPNAG00000006738) yrk (ENSPNAG00000004051) AHDC1 (ENSPNAG00000004726) ENSPNAG00000026358 wasf2 (ENSPNAG00000026345) gpr3 (ENSPNAG00000026328) ENSPNAG00000026316 Mexicana tetra MODERN SPECIES 15 psmb4 (ENSAMXG00000020525) ENSAMXG00000020532 si:dkey-228a15.1 (ENSAMXG00000032047) sytl1 (ENSAMXG00000031491) fkbp9 (ENSAMXG00000020542) crtap (ENSAMXG00000020548) ENSAMXG00000020553 fbxl2 (ENSAMXG00000042893) clasp2 (ENSAMXG00000020565) ubp1 (ENSAMXG00000020575) pdcd6ip (ENSAMXG00000020580) ENSAMXG00000020587 cyhr1 (ENSAMXG00000020589) ENSAMXG00000032506 ENSAMXG00000036806 fabp3 (ENSAMXG00000042510) #22 zcchc17 (ENSAMXG00000020595) #23 snrnp40 (ENSAMXG00000020599) #24 nkain1 (ENSAMXG00000042549) #25 pum1 (ENSAMXG00000020607) #26 SDC3 (ENSAMXG00000020610) #27 ENSAMXG00000037645 ENSAMXG00000037364 matn1 (ENSAMXG00000020612) #29 sesn2 (ENSAMXG00000020616) yrk (ENSAMXG00000020619) AHDC1 (ENSAMXG00000025287) wasf2 (ENSAMXG00000020622) gpr3 (ENSAMXG00000036140) ENSAMXG00000020624 si:ch211-199g17.9 (ENSAMXG00000041603) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT00940000164843.b ENSGT00940000163923.c ENSGT00940000163923.d ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j.b ENSGT00940000159476.i ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638.g #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 97 ENSGT00390000000698.a ENSGT00940000163923.c.a ENSGT00940000163923.d ENSGT00940000160932.f ENSGT00940000157125.h ENSGT00940000153814.a.h ENSGT00390000009163.h ENSGT00940000153845.a.b.d ENSGT00940000155574.C.p ENSGT00940000156148.a ENSGT00940000163083.g ENSGT00940000156095.n.a ENSGT00390000018258.n ENSGT00940000159476.j.b ENSGT00940000159476.i ENSGT00940000155104.i #22 ENSGT00510000047363.ec #23 ENSGT00940000155058.r #24 ENSGT00940000159949.d #25 ENSGT00940000158079.a #26 ENSGT00940000160209.a #27 ENSGT00650000093445.d ENSGT00940000175786.a ENSGT00940000159638.g.a #29 ENSGT00950000183168.B.a.a ENSGT00940000157554.s.a ENSGT00390000018883.c ENSGT00950000182962.b.a.a ENSGT00530000063929.a.b.h.a Goldfish MODERN SPECIES 38 si:ch211-191i18.2 (ENSCARG00000048557) anp32e (ENSCARG00000048578) plekho1a (ENSCARG00000048649) vps45 (ENSCARG00000048965) psmb4 (ENSCARG00000052384) zgc:110239 (ENSCARG00000052467) fkbp9 (ENSCARG00000052586) crtap (ENSCARG00000052603) ENSCARG00000052628 fbxl2 (ENSCARG00000052662) clasp2 (ENSCARG00000053032) ubp1 (ENSCARG00000060341) pdcd6ip (ENSCARG00000064352) ENSCARG00000065429 cyhr1 (ENSCARG00000065469) FABP-3 (ENSCARG00000065484) #22 zcchc17 (ENSCARG00000065499) #23 snrnp40 (ENSCARG00000065518) #24 nkain1 (ENSCARG00000065536) #25 pum1 (ENSCARG00000065574) #26 SDC3 (ENSCARG00000065809) #27 ENSCARG00000065818 ENSCARG00000065824 matn1 (ENSCARG00000065836) #29 sesn2 (ENSCARG00000018320) yrk (ENSCARG00000018346) AHDC1 (ENSCARG00000018410) wasf2 (ENSCARG00000018420) CD164L2 (ENSCARG00000018441) si:ch211-199g17.9 (ENSCARG00000018451) fam83hb (ENSCARG00000018473) Cyprininae_a ANCESTRAL SPECIES 124 ENSGT00390000000698.a ENSGT00940000163923.c.a ENSGT00940000163923.d.a ENSGT00940000160932.f ENSGT00940000157125.h ENSGT00940000153814.a.h ENSGT00390000009163.g.b ENSGT00940000153845.a.b.d ENSGT00940000155574.C.p ENSGT00940000156148.a ENSGT00940000163083.g ENSGT00940000156095.n.a ENSGT00390000018258.n ENSGT00940000159476.j.b ENSGT00940000159476.i ENSGT00940000155104.i #22 ENSGT00510000047363.ec #23 ENSGT00940000155058.r #24 ENSGT00940000159949.d #25 ENSGT00940000158079.a #26 ENSGT00940000160209.a #27 ENSGT00650000093445.d ENSGT00940000175786.a ENSGT00940000159638.g.a #29 ENSGT00950000183168.B.a.a ENSGT00940000157554.s.a ENSGT00390000018883.c ENSGT00950000182962.b.a.a ENSGT01060000248564.b.a.a.a.b ENSGT00530000063929.a.b.h.a ENSGT00940000177340 Common carp reference MODERN SPECIES 31 psmb4 (ENSCCRG00000044045) zgc:110239 (ENSCCRG00000002891) ENSCCRG00000081507 sytl1 (ENSCCRG00000035579) fkbp9 (ENSCCRG00000058661) crtap (ENSCCRG00000001962) ENSCCRG00000072043 fbxl2 (ENSCCRG00000002255) clasp2 (ENSCCRG00000055976) ubp1 (ENSCCRG00000042284) pdcd6ip (ENSCCRG00000041357) ENSCCRG00000050861 cyhr1 (ENSCCRG00000072599) ENSCCRG00000079492 ENSCCRG00000050856 fabp3 (ENSCCRG00000050853) #22 zcchc17 (ENSCCRG00000050846) #23 snrnp40 (ENSCCRG00000079296) #24 pum1 (ENSCCRG00000050733) #26 SDC3 (ENSCCRG00000042010) #27 ENSCCRG00000050201 ENSCCRG00000081784 matn1 (ENSCCRG00000079213) #29 sesn2 (ENSCCRG00000031091) yrk (ENSCCRG00000061987) AHDC1 (ENSCCRG00000062000) wasf2 (ENSCCRG00000071212) gpr3 (ENSCCRG00000077745) CD164L2 (ENSCCRG00000042396) si:ch211-199g17.9 (ENSCCRG00000050871) fam83hb (ENSCCRG00000050874) Golden-line barbel MODERN SPECIES 143 plekho1a (ENSSGRG00000000266) vps45 (ENSSGRG00000000381) zgc:153441 (ENSSGRG00000000737) pogza (ENSSGRG00000000740) psmb4 (ENSSGRG00000000741) zgc:110239 (ENSSGRG00000000783) fkbp9 (ENSSGRG00000000792) crtap (ENSSGRG00000000939) fbxl2 (ENSSGRG00000000940) clasp2 (ENSSGRG00000001095) ubp1 (ENSSGRG00000014216) pdcd6ip (ENSSGRG00000014905) ENSSGRG00000014977 cyhr1 (ENSSGRG00000014978) DCLK3 (ENSSGRG00000014979) fabp3 (ENSSGRG00000014983) #22 zcchc17 (ENSSGRG00000014987) #23 snrnp40 (ENSSGRG00000014990) #24 nkain1 (ENSSGRG00000015064) #25 pum1 (ENSSGRG00000015138) #26 SDC3 (ENSSGRG00000018132) #27 ENSSGRG00000018133 ENSSGRG00000018134 matn1 (ENSSGRG00000018135) #29 yrk (ENSSGRG00000018208) AHDC1 (ENSSGRG00000023178) wasf2 (ENSSGRG00000023179) gpr3 (ENSSGRG00000023180) ENSSGRG00000023181 si:ch211-199g17.9 (ENSSGRG00000023183) fam83hb (ENSSGRG00000023184) Cyprininae ANCESTRAL SPECIES 59 ENSGT00940000163854.a.b.d ENSGT00390000000698.b ENSGT00940000164843.b.h ENSGT00940000163923.c.b ENSGT00940000160932.e ENSGT00940000157125.g ENSGT00940000153814.a.g ENSGT00390000009163.g.a ENSGT00940000153845.a.b.c ENSGT00940000155574.C.o ENSGT00940000156148.b ENSGT00940000163083.h ENSGT00940000156095.n.b ENSGT00390000018258.m ENSGT00940000159476.j.a ENSGT00940000155104.j #22 ENSGT00510000047363.fc #23 ENSGT00940000155058.q #24 ENSGT00940000159949.c #25 ENSGT00940000158079.b #26 ENSGT00940000160209.b #27 ENSGT00650000093445.c ENSGT00940000175786.b ENSGT00940000159638.g.b #29 ENSGT00950000183168.B.a.b ENSGT00940000157554.s.b ENSGT00390000018883.d ENSGT00390000002881 ENSGT00530000063583.b.k ENSGT00950000182962.b.b.t.a ENSGT01060000248564.b.a.a.b.f Goldfish MODERN SPECIES 10 psmb4 (ENSCARG00000044987) ENSCARG00000044928 zgc:110239 (ENSCARG00000044749) sytl1 (ENSCARG00000044689) fkbp9 (ENSCARG00000044147) crtap (ENSCARG00000044077) ENSCARG00000044060 fbxl2 (ENSCARG00000043901) clasp2 (ENSCARG00000033627) ubp1 (ENSCARG00000031869) pdcd6ip (ENSCARG00000029920) ENSCARG00000029843 ENSCARG00000029833 cyhr1 (ENSCARG00000029823) DCLK3 (ENSCARG00000029807) fabp3 (ENSCARG00000029792) #22 zcchc17 (ENSCARG00000029769) #23 snrnp40 (ENSCARG00000029636) #24 nkain1 (ENSCARG00000029596) #25 pum1 (ENSCARG00000029238) #26 ENSCARG00000029181 ENSCARG00000029176 matn1 (ENSCARG00000029150) #29 sesn2 (ENSCARG00000029114) yrk (ENSCARG00000028409) AHDC1 (ENSCARG00000028377) wasf2 (ENSCARG00000028362) CD164L2 (ENSCARG00000028352) si:ch211-199g17.9 (ENSCARG00000028332) fam83hb (ENSCARG00000028324) KIAA0319L (ENSCARG00000027964) Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00390000000698.b ENSGT00940000164843.b.h ENSGT00940000163923.c.b ENSGT00940000163923.d.b ENSGT00940000160932.e ENSGT00940000157125.g ENSGT00940000153814.a.g ENSGT00390000009163.g.a ENSGT00940000153845.a.b.c ENSGT00940000155574.C.o ENSGT00940000156148.b ENSGT00940000163083.h ENSGT00940000156095.n.b ENSGT00390000018258.m ENSGT00940000159476.j.a ENSGT00940000155104.j #22 ENSGT00510000047363.fc #23 ENSGT00940000155058.q #24 ENSGT00940000159949.c #25 ENSGT00940000158079.b #26 ENSGT00940000160209.b #27 ENSGT00650000093445.c ENSGT00940000175786.b ENSGT00940000159638.g.b #29 ENSGT00950000183168.B.a.b ENSGT00940000157554.s.b ENSGT00390000018883.d ENSGT00950000182962.b.a.b ENSGT01060000248564.b.a.a.a.a ENSGT00530000063929.a.b.h.b ENSGT00940000159342.a.d Golden-line barbel MODERN SPECIES 172 psmb4 (ENSSGRG00000042745) ENSSGRG00000042784 zgc:110239 (ENSSGRG00000042785) sytl1 (ENSSGRG00000042790) fkbp9 (ENSSGRG00000042792) crtap (ENSSGRG00000042826) ENSSGRG00000042827 fbxl2 (ENSSGRG00000042830) clasp2 (ENSSGRG00000042883) ubp1 (ENSSGRG00000045392) pdcd6ip (ENSSGRG00000045411) ENSSGRG00000045526 cyhr1 (ENSSGRG00000045527) ENSSGRG00000045528 ENSSGRG00000045529 fabp3 (ENSSGRG00000045530) #22 zcchc17 (ENSSGRG00000045534) #23 snrnp40 (ENSSGRG00000045535) #24 nkain1 (ENSSGRG00000045553) #25 pum1 (ENSSGRG00000045643) #26 SDC3 (ENSSGRG00000047524) #27 ENSSGRG00000047526 ENSSGRG00000047527 matn1 (ENSSGRG00000047529) #29 sesn2 (ENSSGRG00000047531) yrk (ENSSGRG00000047533) AHDC1 (ENSSGRG00000047539) ENSSGRG00000047540 wasf2 (ENSSGRG00000047541) gpr3 (ENSSGRG00000047542) Common carp reference MODERN SPECIES 12 ENSCCRG00000002902 zgc:110239 (ENSCCRG00000068735) ENSCCRG00000051612 sytl1 (ENSCCRG00000051613) fkbp9 (ENSCCRG00000002002) crtap (ENSCCRG00000062249) ENSCCRG00000059505 fbxl2 (ENSCCRG00000051455) clasp2 (ENSCCRG00000061111) ubp1 (ENSCCRG00000047174) pdcd6ip (ENSCCRG00000042173) ENSCCRG00000042036 cyhr1 (ENSCCRG00000050859) ENSCCRG00000057137 ENSCCRG00000071079 fabp3 (ENSCCRG00000050276) #22 zcchc17 (ENSCCRG00000050274) #23 snrnp40 (ENSCCRG00000050273) #24 nkain1 (ENSCCRG00000050272) #25 pum1 (ENSCCRG00000050210) #26 SDC3 (ENSCCRG00000050207) #27 ENSCCRG00000075270 ENSCCRG00000050193 matn1 (ENSCCRG00000050188) #29 yrk (ENSCCRG00000028075) AHDC1 (ENSCCRG00000042824) ENSCCRG00000042892 wasf2 (ENSCCRG00000068336) gpr3 (ENSCCRG00000079101) CD164L2 (ENSCCRG00000042879) fam83hb (ENSCCRG00000062349) Zebrafish MODERN SPECIES 10 zgc:123103 (ENSDARG00000099200) ENSDARG00000035665 si:dkey-228a15.1 (ENSDARG00000095698) zgc:103438 (ENSDARG00000035663) sytl1 (ENSDARG00000070094) fkbp9 (ENSDARG00000005023) crtap (ENSDARG00000018010) ENSDARG00000088277 fbxl2 (ENSDARG00000012135) clasp2 (ENSDARG00000020345) ubp1 (ENSDARG00000018000) pdcd6ip (ENSDARG00000025269) ENSDARG00000061081 cyhr1 (ENSDARG00000061057) DCLK3 (ENSDARG00000078997) fabp3 (ENSDARG00000023290) #22 zcchc17 (ENSDARG00000018936) #23 snrnp40 (ENSDARG00000023160) #24 nkain1 (ENSDARG00000006859) #25 pum1 (ENSDARG00000099256) #26 eef1a1l1 (ENSDARG00000020850) ENSDARG00000109996 gnrhr1 (ENSDARG00000100593) DGKD (ENSDARG00000113111) ENSDARG00000101785 matn1 (ENSDARG00000030215) #29 sesn2 (ENSDARG00000070012) yrk (ENSDARG00000004378) AHDC1 (ENSDARG00000093453) ENSDARG00000100839 ENSDARG00000035657 Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00940000170872 ENSGT00940000164175.b ENSGT00940000159342.a.a ENSGT00940000172951 ENSGT00940000157125.j ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C.e ENSGT00940000156148 ENSGT00940000163083.m ENSGT00940000160796 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 #22 ENSGT00510000047363 #23 ENSGT00940000155058 #24 ENSGT00940000159949 #25 ENSGT00940000158079 #26 ENSGT00940000160209 #27 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 #29 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00940000160073 Asian bonytongue MODERN SPECIES 15 ppp1r8a (ENSSFOG00015020758) ugt2a6 (ENSSFOG00015020780) ENSSFOG00015020881 fam83hb (ENSSFOG00015020932) ENSSFOG00015020940 fkbp9 (ENSSFOG00015020951) crtap (ENSSFOG00015028221) ENSSFOG00015026417 fbxl2 (ENSSFOG00015020987) clasp2 (ENSSFOG00015021026) ubp1 (ENSSFOG00015021198) pdcd6ip (ENSSFOG00015021211) ARPP21 (ENSSFOG00015021262) cyhr1 (ENSSFOG00015031227) DCLK3 (ENSSFOG00015024444) fabp3 (ENSSFOG00015021320) #22 zcchc17 (ENSSFOG00015021334) #23 snrnp40 (ENSSFOG00015021344) #24 nkain1 (ENSSFOG00015021363) #25 pum1 (ENSSFOG00015021412) #26 SDC3 (ENSSFOG00015026152) #27 ENSSFOG00015026177 ENSSFOG00015021457 matn1 (ENSSFOG00015021478) #29 sesn2 (ENSSFOG00015021495) yrk (ENSSFOG00015021516) AHDC1 (ENSSFOG00015021553) ENSSFOG00015021560 wasf2 (ENSSFOG00015021571) gpr3 (ENSSFOG00015029053) ENSSFOG00015021585 P. kingsleyae MODERN SPECIES 72 fam83hb (ENSPKIG00000011416) ENSPKIG00000011395 fkbp9 (ENSPKIG00000011376) crtap (ENSPKIG00000011340) ENSPKIG00000011308 fbxl2 (ENSPKIG00000011241) ENSPKIG00000011209 clasp2 (ENSPKIG00000011150) ubp1 (ENSPKIG00000011105) pdcd6ip (ENSPKIG00000011051) ENSPKIG00000011035 ENSPKIG00000011024 ARPP21 (ENSPKIG00000010891) cyhr1 (ENSPKIG00000010818) DCLK3 (ENSPKIG00000010804) fabp3 (ENSPKIG00000010776) #22 zcchc17 (ENSPKIG00000010742) #23 snrnp40 (ENSPKIG00000010709) #24 nkain1 (ENSPKIG00000010673) #25 pum1 (ENSPKIG00000010578) #26 ENSPKIG00000010535 SDC3 (ENSPKIG00000010522) #27 ENSPKIG00000010479 ENSPKIG00000010428 matn1 (ENSPKIG00000010387) #29 sesn2 (ENSPKIG00000010367) yrk (ENSPKIG00000010342) AHDC1 (ENSPKIG00000010324) ENSPKIG00000010293 wasf2 (ENSPKIG00000010237) gpr3 (ENSPKIG00000010202) Spotted gar MODERN SPECIES 672 fam110d (ENSLOCG00000018288) dhdds (ENSLOCG00000005552) ENSLOCG00000018287 ENSLOCG00000018286 ENSLOCG00000005535 cnksr1 (ENSLOCG00000005495) rps6ka1 (ENSLOCG00000005457) asap3 (ENSLOCG00000005435) E2F2 (ENSLOCG00000005413) id3 (ENSLOCG00000005395) ENSLOCG00000005379 ythdf2 (ENSLOCG00000005362) #36 vgll2b (ENSLOCG00000005348) ctsl.1 (ENSLOCG00000005329) ctsl.1 (ENSLOCG00000005309) fabp3 (ENSLOCG00000005299) #22 zcchc17 (ENSLOCG00000005280) #23 snrnp40 (ENSLOCG00000005258) #24 nkain1 (ENSLOCG00000005227) #25 pum1 (ENSLOCG00000005210) #26 ENSLOCG00000005176 ENSLOCG00000005164 ENSLOCG00000018285 ENSLOCG00000005149 #28 matn1 (ENSLOCG00000005128) #29 SESN2 (ENSLOCG00000005106) ENSLOCG00000005086 ENSLOCG00000018284 ENSLOCG00000005054 ENSLOCG00000005034 ENSLOCG00000005016 Reedfish MODERN SPECIES 5 id3 (ENSECRG00000018578) ENSECRG00000018559 asap3 (ENSECRG00000018503) tcea3 (ENSECRG00000018452) ENSECRG00000018418 ENSECRG00000018410 oprd1a (ENSECRG00000018125) #35 rcc1 (ENSECRG00000018062) ENSECRG00000018041 ENSECRG00000018015 edn2 (ENSECRG00000018001) HIVEP3 (ENSECRG00000017985) serinc2 (ENSECRG00000017958) #21 ENSECRG00000017943 ENSECRG00000017926 fabp3 (ENSECRG00000017903) #22 zcchc17 (ENSECRG00000017887) #23 snrnp40 (ENSECRG00000017853) #24 nkain1 (ENSECRG00000017809) #25 pum1 (ENSECRG00000017752) #26 SDC3 (ENSECRG00000017726) #27 ENSECRG00000017702 LAPTM5 (ENSECRG00000017676) #28 matn1 (ENSECRG00000017618) #29 ENSECRG00000017575 ENSECRG00000017517 AHDC1 (ENSECRG00000017501) ENSECRG00000017480 wasf2 (ENSECRG00000017455) gpr3 (ENSECRG00000017389) ENSECRG00000017371 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1533 ENSCMIG00000001667 ##21 PKIA (ENSCMIG00000001660) ada (ENSCMIG00000001580) zc2hc1a (ENSCMIG00000001537) STMN2 (ENSCMIG00000001530) hey1 (ENSCMIG00000001524) mrps28 (ENSCMIG00000001515) TPD52 (ENSCMIG00000001501) ENSCMIG00000001492 ENSCMIG00000001488 znf704 (ENSCMIG00000001480) PAG1 (ENSCMIG00000001468) ENSCMIG00000001450 ENSCMIG00000001408 #22 ENSCMIG00000001391 IMPA1 (ENSCMIG00000001376) SLC10A5 (ENSCMIG00000001374) zfand1 (ENSCMIG00000001370) ENSCMIG00000001362 snx16 (ENSCMIG00000001357) ENSCMIG00000001351 ENSCMIG00000001347 FBXO43 (ENSCMIG00000001345) ENSCMIG00000001336 SPAG1 (ENSCMIG00000001331) ADGRB1 (ENSCMIG00000001012) ENSCMIG00000000900 sgk3 (ENSCMIG00000000609) VCPIP1 (ENSCMIG00000000495) Elephant shark MODERN SPECIES 1521 ENSCMIG00000017654 ENSCMIG00000017646 rcc1 (ENSCMIG00000017636) oprd1a (ENSCMIG00000017620) #35 tcea3 (ENSCMIG00000017608) asap3 (ENSCMIG00000017594) ENSCMIG00000017587 ENSCMIG00000017584 ENSCMIG00000017577 ENSCMIG00000017574 cited4b (ENSCMIG00000017572) ENSCMIG00000017549 rab42a (ENSCMIG00000017544) ENSCMIG00000017541 ENSCMIG00000017537 ENSCMIG00000017535 #22 zcchc17 (ENSCMIG00000017532) #23 snrnp40 (ENSCMIG00000017529) #24 nkain1 (ENSCMIG00000017526) #25 ENSCMIG00000017524 pum1 (ENSCMIG00000017449) #26 ENSCMIG00000017385 #27 ENSCMIG00000017370 ENSCMIG00000017356 matn1 (ENSCMIG00000017349) #29 ppp1r8 (ENSCMIG00000017344) trnau1apa (ENSCMIG00000017341) stx12 (ENSCMIG00000017328) ccn2b (ENSCMIG00000017312) EPB41 (ENSCMIG00000017073) #34 ENSCMIG00000016945 #33 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155104 #22 Hagfish DUPLICATION Hagfish MODERN SPECIES 1423 MOB2 (ENSEBUG00000011143) ppp6r3 (ENSEBUG00000016959) ENSEBUG00000006333 ddb1 (ENSEBUG00000014593) ENSEBUG00000005661 ENSEBUG00000007995 ENSEBUG00000001151 ENSEBUG00000004736 ENSEBUG00000005409 ENSEBUG00000012431 ENSEBUG00000001701 slc6a17 (ENSEBUG00000002806) ENSEBUG00000002834 guca1a (ENSEBUG00000014959) ENSEBUG00000002212 ENSEBUG00000007478 #22 ENSEBUG00000002993 ENSEBUG00000001916 mycn (ENSEBUG00000014234) ENSEBUG00000009800 ENSEBUG00000017017 ENSEBUG00000011694 ENSEBUG00000014040 ENSEBUG00000015576 Hagfish MODERN SPECIES 86 ENSEBUG00000011844 ENSEBUG00000008244 ENSEBUG00000008982 ENSEBUG00000014925 ENSEBUG00000012355 med17 (ENSEBUG00000012014) ENSEBUG00000011228 tm9sf3 (ENSEBUG00000015991) ENSEBUG00000012541 TLL2 (ENSEBUG00000016629) ENSEBUG00000008933 ENSEBUG00000016350 glud1b (ENSEBUG00000004797) ENSEBUG00000014595 ENSEBUG00000008432 fabp3 (ENSEBUG00000004219) #22 Lamprey DUPLICATION Lamprey MODERN SPECIES 981 ENSPMAG00000000817 fabp3 (ENSPMAG00000000821) #22 ergic3 (ENSPMAG00000000827) Lamprey MODERN SPECIES 73 ENSPMAG00000007571 ENSPMAG00000007582 KLHL29 (ENSPMAG00000007585) ENSPMAG00000007600 wdr35 (ENSPMAG00000007602) ENSPMAG00000007609 ENSPMAG00000007630 dtna (ENSPMAG00000007634) ENSPMAG00000007710 FABP3 (ENSPMAG00000007727) #22