Eutheria	ANCESTRAL SPECIES	30											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00940000167417 #33	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Boreoeutheria	ANCESTRAL SPECIES	7											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00940000167417 #33	ENSGT00390000011804
Laurasiatheria	ANCESTRAL SPECIES	7								ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162104	ENSGT00390000000706	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.wb.b ##32	ENSGT00940000175246	ENSGT00940000154150.xb #32	ENSGT00940000167417 #33
Laurasiatheria_a	ANCESTRAL SPECIES	7											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.wb.b ##32	ENSGT00940000175246	ENSGT00940000154150.xb #32	ENSGT00940000167417.a #33
Artiodactyla	ANCESTRAL SPECIES	15										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00940000154150.xb.s.b #32	ENSGT00940000167417.a #33	ENSGT00940000154150.xb.s.a ##32
Suina	ANCESTRAL SPECIES	8										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00940000154150.xb.s.b #32	ENSGT00940000167417.a.b #33	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Pig	MODERN SPECIES	15								DUSP22 (ENSSSCG00000031489) #14	IRF4 (ENSSSCG00000033381) #15	EXOC2 (ENSSSCG00000000985) #16	ENSSSCG00000041494 #17	ENSSSCG00000059227 #18	FOXQ1 (ENSSSCG00000000991) #19	FOXF2 (ENSSSCG00000037195) #20	GMDS (ENSSSCG00000000994) #21	FOXC1 (ENSSSCG00000039756) #22	ENSSSCG00000028777 #23	WRNIP1 (ENSSSCG00000001010) #24	SERPINB1 (ENSSSCG00000001011) #25	SERPINB9 (ENSSSCG00000031615) #26	ENSSSCG00000038404 #27	NQO2 (ENSSSCG00000020758) #28	RIPK1 (ENSSSCG00000001009) #29	BPHL (ENSSSCG00000001008) #30	TUBB2A (ENSSSCG00000062050) #31	TUBB2B (ENSSSCG00000033655) #32	ENSSSCG00000036988 #33	SLC22A23 (ENSSSCG00000001004) #34	PXDC1 (ENSSSCG00000025582) #35	FAM50B (ENSSSCG00000026323) #36	PRPF4B (ENSSSCG00000001002) #37
Chacoan peccary	MODERN SPECIES	779				PXDN (ENSCWAG00000009216)	TPO (ENSCWAG00000008328)	TMEM18 (ENSCWAG00000008176)	ENSCWAG00000008061	ACP1 (ENSCWAG00000007939)	SH3YL1 (ENSCWAG00000007682)	FAM110C (ENSCWAG00000007650)	DUSP22 (ENSCWAG00000007618) #14	IRF4 (ENSCWAG00000007584) #15	EXOC2 (ENSCWAG00000007537) #16	FOXQ1 (ENSCWAG00000007521) #19	FOXF2 (ENSCWAG00000007491) #20	FOXC1 (ENSCWAG00000007480) #22
Artiodactyla_a	ANCESTRAL SPECIES	27										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.s.a ##32	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34
Artiodactyla_b	ANCESTRAL SPECIES	15										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.s.a ##32	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Pecora	ANCESTRAL SPECIES	32										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.e #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.s.a ##32	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Percora_a	ANCESTRAL SPECIES	12										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.f.a.b.a #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.s.a ##32	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34
Siberian musk deer	MODERN SPECIES	96											DUSP22 (ENSMMSG00000002139) #14	IRF4 (ENSMMSG00000001999) #15	EXOC2 (ENSMMSG00000001872) #16	FOXQ1 (ENSMMSG00000001830) #19	FOXF2 (ENSMMSG00000001814) #20	FOXC1 (ENSMMSG00000001806) #22	GMDS (ENSMMSG00000001775) #21	MYLK4 (ENSMMSG00000001649) #23	WRNIP1 (ENSMMSG00000001591) #24	SERPINB1 (ENSMMSG00000001564) #25	SERPINB9 (ENSMMSG00000001536) #26	ENSMMSG00000001505 #27	ENSMMSG00000001478 #27	ENSMMSG00000001460 #27	ENSMMSG00000001423 #27	ENSMMSG00000000678 #27	ENSMMSG00000000568 #27	NQO2 (ENSMMSG00000000521) #28	RIPK1 (ENSMMSG00000000490) #29	BPHL (ENSMMSG00000000460) #30	TUBB2B (ENSMMSG00000000409) #31
Bovidae	ANCESTRAL SPECIES	13										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.f.a.b.a #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.s.a ##32	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34
Bovinae	ANCESTRAL SPECIES	9										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.e.a #27	ENSGT00940000154519.e.b.b.a #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
American bison	MODERN SPECIES	3235												ENSBBBG00000008241 #14	ENSBBBG00000006637 #14	IRF4 (ENSBBBG00000025076) #15	EXOC2 (ENSBBBG00000025059) #16	ENSBBBG00000006603 #22	GMDS (ENSBBBG00000024989) #21	MYLK4 (ENSBBBG00000024933) #23	ENSBBBG00000024867 #24	SERPINB1 (ENSBBBG00000007815) #25	SERPINB9 (ENSBBBG00000006536) #26	ENSBBBG00000024820 #27
Bos	ANCESTRAL SPECIES	37										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.e.a.a #27	ENSGT00940000154519.e.b.b.a.c #27	ENSGT00940000154519.e.b.b.b.a #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34
Bos_b	ANCESTRAL SPECIES	8										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT01070000257212 #18	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.e.a.b #27	ENSGT00940000154519.e.a.a #27	ENSGT00940000154519.e.b.b.a.c #27	ENSGT00940000154519.e.b.b.b.a #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804
Cow	MODERN SPECIES	15										DUSP22 (ENSBTAG00000027375) #14	IRF4 (ENSBTAG00000002929) #15	EXOC2 (ENSBTAG00000020215) #16	ENSBTAG00000051218 #18	FOXQ1 (ENSBTAG00000052132) #19	FOXF2 (ENSBTAG00000026896) #20	ENSBTAG00000050875 #22	GMDS (ENSBTAG00000012058) #21	MYLK4 (ENSBTAG00000012079) #23	WRNIP1 (ENSBTAG00000006166) #24	SERPINB1 (ENSBTAG00000011975) #25	SERPINB9 (ENSBTAG00000031267) #26	ENSBTAG00000053511 #27	SERPINB6 (ENSBTAG00000050155) #27	ENSBTAG00000054098 #27	ENSBTAG00000053741 #27	ENSBTAG00000049906 #27	NQO2 (ENSBTAG00000000786) #28	ENSBTAG00000051842	RIPK1 (ENSBTAG00000006378) #29	BPHL (ENSBTAG00000006379) #30	TUBB2A (ENSBTAG00000048485) #31
Bos_a	ANCESTRAL SPECIES	49											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.e.a.a #27	ENSGT00940000154519.e.b.b.a.c #27	ENSGT00940000154519.e.b.b.b.a #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00940000154150.xb.s.b #32	ENSGT00390000011804
Domestic yak	MODERN SPECIES	16										ENSBGRG00000012625 #14	IRF4 (ENSBGRG00000012510) #15	EXOC2 (ENSBGRG00000011992) #16	ENSBGRG00000011911	ENSBGRG00000011879 #19	FOXF2 (ENSBGRG00000011788) #20	FOXC1 (ENSBGRG00000011734) #22	GMDS (ENSBGRG00000011025) #21	MYLK4 (ENSBGRG00000010518) #23	WRNIP1 (ENSBGRG00000010299) #24	SERPINB1 (ENSBGRG00000010205) #25	SERPINB9 (ENSBGRG00000010171) #26	ENSBGRG00000010125 #27	ENSBGRG00000009409 #27	ENSBGRG00000009283 #27	ENSBGRG00000009235 #27	NQO2 (ENSBGRG00000009131) #28	RIPK1 (ENSBGRG00000009042) #29	BPHL (ENSBGRG00000008956) #30	TUBB2A (ENSBGRG00000008862) #31	ENSBGRG00000008779	SLC22A23 (ENSBGRG00000008663) #34
Caprinae	ANCESTRAL SPECIES	41											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154519.f.a.b.a #27	ENSGT00940000154519.f.a.a.a.a.a #27	ENSGT00940000154931 #26	ENSGT00940000154519.f.a.a.a.b #27	ENSGT00940000154519.e.b.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150.xb.t #31	ENSGT00390000011804
Rambouillet Sheep	MODERN SPECIES	12												DUSP22 (ENSOARG00020010129) #14	IRF4 (ENSOARG00020010003) #15	EXOC2 (ENSOARG00020009424) #16	FOXF2 (ENSOARG00020009297) #20	ENSOARG00020009253 #22	GMDS (ENSOARG00020009159) #21	ENSOARG00020009120	ENSOARG00020008839 #23	WRNIP1 (ENSOARG00020008718) #24	SERPINB1 (ENSOARG00020008679) #25	ENSOARG00020008634 #27	SERPINB9 (ENSOARG00020008599) #26	ENSOARG00020008440 #27	ENSOARG00020008345 #27	ENSOARG00020008292	ENSOARG00020007031 #27	ENSOARG00020006863 #27	ENSOARG00020006784 #28	RIPK1 (ENSOARG00020006711) #29	RIPK1 (ENSOARG00020006661) #30
Goat	MODERN SPECIES	15											DUSP22 (ENSCHIG00000013023) #14	IRF4 (ENSCHIG00000017135) #15	EXOC2 (ENSCHIG00000013305) #16	FOXQ1 (ENSCHIG00000002934) #19	FOXF2 (ENSCHIG00000020355) #20	FOXC1 (ENSCHIG00000007582) #22	GMDS (ENSCHIG00000017697) #21	MYLK4 (ENSCHIG00000008115) #23	WRNIP1 (ENSCHIG00000014698) #24	SERPINB1 (ENSCHIG00000018405) #25	SERPINB9 (ENSCHIG00000016184) #26	ENSCHIG00000026893 #27	ENSCHIG00000014629 #27	LY86 (ENSCHIG00000000721)	RREB1 (ENSCHIG00000008467)	ENSCHIG00000012601	SSR1 (ENSCHIG00000021769)	CAGE1 (ENSCHIG00000021103)	RIOK1 (ENSCHIG00000001534)	DSP (ENSCHIG00000013613)	SNRNP48 (ENSCHIG00000015216)
Cetacea	ANCESTRAL SPECIES	7											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT01000000221719	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.c #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37
Blue whale	MODERN SPECIES	2											ENSBMSG00010006898 #14	IRF4 (ENSBMSG00010006934) #15	EXOC2 (ENSBMSG00010006978) #16	FOXQ1 (ENSBMSG00010007017) #19	FOXF2 (ENSBMSG00010007027) #20	FOXC1 (ENSBMSG00010007030) #22	GMDS (ENSBMSG00010007043) #21	ENSBMSG00010007069	MYLK4 (ENSBMSG00010007088) #23	WRNIP1 (ENSBMSG00010007123) #24	SERPINB1 (ENSBMSG00010007136) #25	SERPINB9 (ENSBMSG00010007151) #26	ENSBMSG00010007165 #27	NQO2 (ENSBMSG00010007187) #28	RIPK1 (ENSBMSG00010007199) #29	BPHL (ENSBMSG00010007209) #30	TUBB2A (ENSBMSG00010007239) #31	PSMG4 (ENSBMSG00010007269)	SLC22A23 (ENSBMSG00010007297) #34	PXDC1 (ENSBMSG00010007412) #35	PRPF4B (ENSBMSG00010007428) #37
Odontoceti	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT01000000221719	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.c #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37
Sperm whale	MODERN SPECIES	9												DUSP22 (ENSPCTG00005010689) #14	IRF4 (ENSPCTG00005010577) #15	EXOC2 (ENSPCTG00005010489) #16	FOXF2 (ENSPCTG00005010432) #20	ENSPCTG00005010376 #22	GMDS (ENSPCTG00005010205) #21	ENSPCTG00005010105	MYLK4 (ENSPCTG00005009809) #23	WRNIP1 (ENSPCTG00005009615) #24	ENSPCTG00005009581 #25	SERPINB9 (ENSPCTG00005009506) #26	ENSPCTG00005009401 #27	NQO2 (ENSPCTG00005009321) #28	RIPK1 (ENSPCTG00005009207) #29	BPHL (ENSPCTG00005009057) #30	TUBB2A (ENSPCTG00005009021) #31	TUBB2A (ENSPCTG00005008977) #31	PXDC1 (ENSPCTG00005008936) #35	PRPF4B (ENSPCTG00005008801) #37	FAM217A (ENSPCTG00005008731)
Odontoceti_a	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT01000000221719	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573.u #25	ENSGT00940000154519.c #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37	ENSGT00940000154543.b
Odontoceti_b	ANCESTRAL SPECIES	6											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT01000000221719	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573.u #25	ENSGT00940000154519.c #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37	ENSGT00940000154543.b
Vaquita	MODERN SPECIES	2											DUSP22 (ENSPSNG00000016848) #14	IRF4 (ENSPSNG00000016722) #15	EXOC2 (ENSPSNG00000016671) #16	FOXQ1 (ENSPSNG00000016632) #19	FOXF2 (ENSPSNG00000016588) #20	ENSPSNG00000016521 #22	GMDS (ENSPSNG00000016429) #21	ENSPSNG00000016357	MYLK4 (ENSPSNG00000016111) #23	WRNIP1 (ENSPSNG00000016040) #24	SERPINB1 (ENSPSNG00000015980) #25	ENSPSNG00000015836 #27	NQO2 (ENSPSNG00000015747) #28	RIPK1 (ENSPSNG00000015681) #29	BPHL (ENSPSNG00000015565) #30	TUBB2A (ENSPSNG00000015438) #31	PSMG4 (ENSPSNG00000015357)	SLC22A23 (ENSPSNG00000015233) #34	PXDC1 (ENSPSNG00000015171) #35	PRPF4B (ENSPSNG00000015086) #37	FAM217A (ENSPSNG00000014949)
Monodontidae	ANCESTRAL SPECIES	4												ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT01000000221719	ENSGT00940000156211.b #23	ENSGT01010000230145	ENSGT00390000008538 #24	ENSGT00940000154519.c #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb.t #31	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37	ENSGT00940000155105
Beluga whale	MODERN SPECIES	10										ENSDLEG00000000776 #14	ENSDLEG00000000793 #14	IRF4 (ENSDLEG00000000806) #15	EXOC2 (ENSDLEG00000000911) #16	ENSDLEG00000001130	FOXF2 (ENSDLEG00000001139) #20	FOXC1 (ENSDLEG00000001148) #22	GMDS (ENSDLEG00000001155) #21	ENSDLEG00000001169	ENSDLEG00000001175	WRNIP1 (ENSDLEG00000001184) #24	ENSDLEG00000001211 #27	NQO2 (ENSDLEG00000001236) #28	RIPK1 (ENSDLEG00000001254) #29	BPHL (ENSDLEG00000001285) #30	TUBB2A (ENSDLEG00000001358) #31	PSMG4 (ENSDLEG00000001383)	SLC22A23 (ENSDLEG00000001395) #34	ENSDLEG00000001426 #35	PRPF4B (ENSDLEG00000001431) #37	ECI2 (ENSDLEG00000001462)	ENSDLEG00000001490
Narwhal	MODERN SPECIES	310	MTCP1 (ENSMMNG00015013799)	BRCC3 (ENSMMNG00015013819)	ENSMMNG00015013846	VBP1 (ENSMMNG00015013861)	RAB39B (ENSMMNG00015013876)	CLIC2 (ENSMMNG00015013884)	ENSMMNG00015013897	TMLHE (ENSMMNG00015013910)	ENSMMNG00015013925	SPRY3 (ENSMMNG00015013931)	VAMP7 (ENSMMNG00015013948)	DUSP22 (ENSMMNG00015013987) #14	IRF4 (ENSMMNG00015014004) #15	EXOC2 (ENSMMNG00015014030) #16	FOXF2 (ENSMMNG00015014085) #20	FOXC1 (ENSMMNG00015014093) #22	GMDS (ENSMMNG00015014105) #21	ENSMMNG00015010189	MYLK4 (ENSMMNG00015010218) #23	ENSMMNG00015010243	WRNIP1 (ENSMMNG00015010266) #24	ENSMMNG00015010309 #27	NQO2 (ENSMMNG00015010357) #28	RIPK1 (ENSMMNG00015010383) #29	BPHL (ENSMMNG00015010397) #30	TUBB2B (ENSMMNG00015010464) #31	PSMG4 (ENSMMNG00015010506)	SLC22A23 (ENSMMNG00015010564) #34	PXDC1 (ENSMMNG00015010618) #35	PRPF4B (ENSMMNG00015010640) #37	ECI2 (ENSMMNG00015010653)
Laurasiatheria_b	ANCESTRAL SPECIES	7											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00390000012138.a.b.t.bb.a.b	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00940000167417.a #33	ENSGT00390000011804	ENSGT00940000157354 #34
Carnivora	ANCESTRAL SPECIES	4	ENSGT00530000064035.a	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329	ENSGT00940000161804	ENSGT00940000158047	ENSGT00940000166358	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00390000012138.a.b.t.bb.a.b	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00940000167417.a #33	ENSGT00390000011804	ENSGT00940000157354 #34
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329	ENSGT00940000161804	ENSGT00940000158047	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00550000074840.z	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00390000009819.a.b.a.a.b.b.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00940000167417.a #33	ENSGT00390000011804
Cat	MODERN SPECIES	236	CB2H6orf136 (ENSFCAG00000007692)	ATAT1 (ENSFCAG00000007689)	MRPS18B (ENSFCAG00000007686)	PPP1R10 (ENSFCAG00000007682)	ABCF1 (ENSFCAG00000007680)	PRR3 (ENSFCAG00000025918)	GNL1 (ENSFCAG00000007676)	RPP21 (ENSFCAG00000034409)	TRIM39 (ENSFCAG00000002034)	ENSFCAG00000045054	DUSP22 (ENSFCAG00000037118) #14	IRF4 (ENSFCAG00000022941) #15	EXOC2 (ENSFCAG00000018670) #16	FOXQ1 (ENSFCAG00000036417) #19	FOXF2 (ENSFCAG00000005901) #20	FOXC1 (ENSFCAG00000043380) #22	GMDS (ENSFCAG00000004783) #21	MYLK4 (ENSFCAG00000034770) #23	ENSFCAG00000034906	ENSFCAG00000053862	WRNIP1 (ENSFCAG00000042833) #24	SERPINB1 (ENSFCAG00000008689) #25	SERPINB9 (ENSFCAG00000000807) #26	SERPINB6 (ENSFCAG00000000810) #27	NQO2 (ENSFCAG00000024592) #28	ENSFCAG00000026193	RIPK1 (ENSFCAG00000014625) #29	BPHL (ENSFCAG00000046730) #30	TUBB2B (ENSFCAG00000014626) #32	PSMG4 (ENSFCAG00000046735)	SLC22A23 (ENSFCAG00000025838) #34
Panthera	ANCESTRAL SPECIES	30	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329	ENSGT00940000161804.e	ENSGT00940000158047	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00550000074840.z	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00390000009819.a.b.a.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00940000167417.a #33	ENSGT00390000011804
Panthera_a	ANCESTRAL SPECIES	32	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329	ENSGT00940000161804.e	ENSGT00940000158047	ENSGT00390000003020	ENSGT00940000154126.h	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00550000074840.z	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00390000009819.a.b.a.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00940000167417.a #33	ENSGT00390000011804
lion	MODERN SPECIES	28										DUSP22 (ENSPLOG00000017225) #14	IRF4 (ENSPLOG00000017300) #15	EXOC2 (ENSPLOG00000017341) #16	ENSPLOG00000017393	FOXQ1 (ENSPLOG00000017508) #19	FOXF2 (ENSPLOG00000017522) #20	ENSPLOG00000017561 #22	GMDS (ENSPLOG00000017599) #21	MYLK4 (ENSPLOG00000017722) #23	ENSPLOG00000017887	ENSPLOG00000017919	WRNIP1 (ENSPLOG00000017949) #24	SERPINB1 (ENSPLOG00000018010) #25	SERPINB9 (ENSPLOG00000018094) #26	NQO2 (ENSPLOG00000018239) #28	ENSPLOG00000018333	RIPK1 (ENSPLOG00000018363) #29	BPHL (ENSPLOG00000018383) #30	ENSPLOG00000018446 #32	TUBB2B (ENSPLOG00000018497) #32	ENSPLOG00000018533 #33	SLC22A23 (ENSPLOG00000018579) #34
leopard	MODERN SPECIES	79	ATAT1 (ENSPPRG00000003362)	MRPS18B (ENSPPRG00000003538)	PPP1R10 (ENSPPRG00000004557)	ABCF1 (ENSPPRG00000006388)	ENSPPRG00000006562	GNL1 (ENSPPRG00000007039)	RPP21 (ENSPPRG00000007503)	TRIM39 (ENSPPRG00000007764)	ENSPPRG00000007888	ENSPPRG00000008066	DUSP22 (ENSPPRG00000008570) #14	IRF4 (ENSPPRG00000009257) #15	EXOC2 (ENSPPRG00000010340) #16	FOXQ1 (ENSPPRG00000014349) #19	FOXF2 (ENSPPRG00000011053) #20	FOXC1 (ENSPPRG00000014362) #22	GMDS (ENSPPRG00000011992) #21	MYLK4 (ENSPPRG00000014341) #23	ENSPPRG00000015212	WRNIP1 (ENSPPRG00000018070) #24	SERPINB1 (ENSPPRG00000019499) #25	SERPINB9 (ENSPPRG00000020115) #26	ENSPPRG00000024624 #27	NQO2 (ENSPPRG00000024196) #28	ENSPPRG00000024159	RIPK1 (ENSPPRG00000024036) #29	BPHL (ENSPPRG00000023975) #30	TUBB2A (ENSPPRG00000023932) #32	TUBB2B (ENSPPRG00000023755) #32	ENSPPRG00000023661 #33	PSMG4 (ENSPPRG00000022994)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329	ENSGT00940000161804	ENSGT00940000158047	ENSGT00940000166358	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00390000012138.a.b.t.bb.a.b	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Caniformia_b	ANCESTRAL SPECIES	31	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329	ENSGT00940000161804	ENSGT00940000158047	ENSGT00940000166358	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00390000012138.a.b.t.bb.a.b	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Mustelinae	ANCESTRAL SPECIES	42											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00390000012138.a.b.t.bb.a.b	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36
American mink	MODERN SPECIES	158									DUS22 (ENSNVIG00000011177) #14	IRF4 (ENSNVIG00000011208) #15	ENSNVIG00000011228	EXOC2 (ENSNVIG00000011250) #16	ENSNVIG00000011347	ENSNVIG00000011350 #19	FOXF2 (ENSNVIG00000011356) #20	FOXC1 (ENSNVIG00000011358) #22	GMDS (ENSNVIG00000011372) #21	MYLK4 (ENSNVIG00000011396) #23	WRNIP1 (ENSNVIG00000011416) #24	ILEU (ENSNVIG00000011445) #25	SERPINB9 (ENSNVIG00000011466) #26	ENSNVIG00000011489 #27	NQO2 (ENSNVIG00000011533) #28	RIPK1 (ENSNVIG00000011579) #29	BPHL (ENSNVIG00000011595) #30	TUBB2B (ENSNVIG00000011631) #32	PSMG4 (ENSNVIG00000011643)	SLC22A23 (ENSNVIG00000011656) #34	PXDC1 (ENSNVIG00000011694) #35	ENSNVIG00000011710	FAM50B (ENSNVIG00000011720) #36
Ferret	MODERN SPECIES	202													ENSMPUG00000000390	FOXQ1 (ENSMPUG00000018966) #19	FOXF2 (ENSMPUG00000000392) #20	FOXC1 (ENSMPUG00000018449) #22	GMDS (ENSMPUG00000000399) #21	ENSMPUG00000018450	MYLK4 (ENSMPUG00000000408) #23	WRNIP1 (ENSMPUG00000000417) #24	SERPINB1 (ENSMPUG00000000421) #25	SERPINB9 (ENSMPUG00000000446) #26	ENSMPUG00000000447	ENSMPUG00000000448 #27	NQO2 (ENSMPUG00000000451) #28	RIPK1 (ENSMPUG00000000454) #29	BPHL (ENSMPUG00000000459) #30	TUBB2B (ENSMPUG00000000462) #32	SLC22A23 (ENSMPUG00000000466) #34	PXDC1 (ENSMPUG00000000491) #35	FAM50B (ENSMPUG00000000493) #36
Ursidae	ANCESTRAL SPECIES	39	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329.h	ENSGT00940000161804	ENSGT00940000158047	ENSGT00940000166358	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36
Giant Panda	MODERN SPECIES	15	PRR3 (ENSAMEG00000028054)	GNL1 (ENSAMEG00000013421)	ENSAMEG00000013405	ENSAMEG00000013448	ENSAMEG00000030310	ENSAMEG00000005967 #14	ENSAMEG00000005976 #15	ENSAMEG00000019338	ENSAMEG00000005656	ENSAMEG00000007436 #16	ENSAMEG00000007495	ENSAMEG00000027994 #19	FOXF2 (ENSAMEG00000029771) #20	ENSAMEG00000025252	ENSAMEG00000025085	ENSAMEG00000010931 #22	GMDS (ENSAMEG00000010935) #21	MYLK4 (ENSAMEG00000010940) #23	ENSAMEG00000025653	WRNIP1 (ENSAMEG00000027067) #24	SERPINB1 (ENSAMEG00000003580) #25	SERPINB9 (ENSAMEG00000003574) #26	ENSAMEG00000003548 #27	NQO2 (ENSAMEG00000014373) #28	RIPK1 (ENSAMEG00000014389) #29	BPHL (ENSAMEG00000014392) #30	ENSAMEG00000014416	ENSAMEG00000023499	ENSAMEG00000030040 #32	ENSAMEG00000014430	ENSAMEG00000014434 #34
Ursus	ANCESTRAL SPECIES	34	ENSGT00940000158480	ENSGT00390000008658	ENSGT00390000008276	ENSGT00390000010554	ENSGT00940000159263	ENSGT00940000158329.h	ENSGT00940000161804	ENSGT00940000158047	ENSGT00940000166358	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Polar bear	MODERN SPECIES	181	MDC1 (ENSUMAG00000019676)	NRM (ENSUMAG00000019672)	DHX16 (ENSUMAG00000019661)	C6orf136 (ENSUMAG00000019659)	MRPS18B (ENSUMAG00000019652)	PPP1R10 (ENSUMAG00000019567)	ABCF1 (ENSUMAG00000019024)	PRR3 (ENSUMAG00000018945)	GNL1 (ENSUMAG00000018935)	ENSUMAG00000018932	DUSP22 (ENSUMAG00000018924) #14	IRF4 (ENSUMAG00000018906) #15	ENSUMAG00000018902	EXOC2 (ENSUMAG00000018869) #16	ENSUMAG00000018847	ENSUMAG00000018836 #22	GMDS (ENSUMAG00000018823) #21	MYLK4 (ENSUMAG00000018791) #23	WRNIP1 (ENSUMAG00000018782) #24	SERPINB1 (ENSUMAG00000018779) #25	SERPINB9 (ENSUMAG00000018772) #26	ENSUMAG00000018764 #27	NQO2 (ENSUMAG00000018754) #28	RIPK1 (ENSUMAG00000018746) #29	BPHL (ENSUMAG00000018741) #30	ENSUMAG00000018737 ##32	ENSUMAG00000018735 #32	ENSUMAG00000018733 #32	PSMG4 (ENSUMAG00000018729)	SLC22A23 (ENSUMAG00000018716) #34	PXDC1 (ENSUMAG00000018711) #35
American black bear	MODERN SPECIES	768													ENSUAMG00000027969	FOXQ1 (ENSUAMG00000027970) #19	FOXF2 (ENSUAMG00000027971) #20	ENSUAMG00000027972 #22
Canidae	ANCESTRAL SPECIES	48											ENSGT00940000163032	ENSGT00390000014654	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37	ENSGT00940000154543.b
Red fox	MODERN SPECIES	173												ENSVVUG00000019165	ENSVVUG00000019160	ENSVVUG00000019147	ENSVVUG00000019144	ENSVVUG00000019136 #22	GMDS (ENSVVUG00000019130) #21	RPLP2 (ENSVVUG00000019125)	MYLK4 (ENSVVUG00000019119) #23	WRNIP1 (ENSVVUG00000019115) #24	SERPINB1 (ENSVVUG00000019110) #25	SERPINB9 (ENSVVUG00000019101) #26	ENSVVUG00000019088 #27	NQO2 (ENSVVUG00000019083) #28	RIPK1 (ENSVVUG00000019070) #29	ENSVVUG00000019068	ENSVVUG00000019060 #30	ENSVVUG00000019059 #30	TUBB2B (ENSVVUG00000019054) #32	SLC22A23 (ENSVVUG00000019044) #34	PXDC1 (ENSVVUG00000019041) #35
Canis_lupus	ANCESTRAL SPECIES	36									ENSGT00940000163032	ENSGT00390000014654	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00970000193590.b.c.b	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT01020000230346.C.e.c.b	ENSGT00390000003582.q.a.b.a.b.a.b
Dingo	MODERN SPECIES	411					ENSCAFG00020000763	SPIDR (ENSCAFG00020000749)	ENSCAFG00020000730	DUSP22 (ENSCAFG00020000724) #14	IRF4 (ENSCAFG00020000645) #15	ENSCAFG00020000635	EXOC2 (ENSCAFG00020000618) #16	ENSCAFG00020000606	FOXF2 (ENSCAFG00020000598) #20	ENSCAFG00020000590	ENSCAFG00020000579	ENSCAFG00020000565 #22	GMDS (ENSCAFG00020000552) #21	MYLK4 (ENSCAFG00020000493) #23	WRNIP1 (ENSCAFG00020000482) #24	SERPINB1 (ENSCAFG00020000473) #25	SERPINB9 (ENSCAFG00020000463) #26	ENSCAFG00020000462 #27	NQO2 (ENSCAFG00020000450) #28	ENSCAFG00020000437	RIPK1 (ENSCAFG00020000428) #29	BPHL (ENSCAFG00020000419) #30	TUBB2B (ENSCAFG00020000389) #32	ENSCAFG00020000376	SLC22A23 (ENSCAFG00020000148) #34	ENSCAFG00020000138 #35	ENSCAFG00020000131
Dog	MODERN SPECIES	28						ENSCAFG00845015648	ENSCAFG00845015680	DUSP22 (ENSCAFG00845015804) #14	ENSCAFG00845015866	IRF4 (ENSCAFG00845015916) #15	EXOC2 (ENSCAFG00845016018) #16	ENSCAFG00845016145	FOXF2 (ENSCAFG00845016185) #20	ENSCAFG00845016251	ENSCAFG00845016281	ENSCAFG00845016313 #22	ENSCAFG00845016489 #21	MYLK4 (ENSCAFG00845016887) #23	WRNIP1 (ENSCAFG00845016996) #24	SERPINB1 (ENSCAFG00845017116) #25	SERPINB9 (ENSCAFG00845017203) #26	SERPINB6 (ENSCAFG00845017287) #27	ENSCAFG00845017319	NQO2 (ENSCAFG00845017337) #28	RIPK1 (ENSCAFG00845017400) #29	ENSCAFG00845017474	BPHL (ENSCAFG00845017516) #30	TUBB2B (ENSCAFG00845017639) #32	PSMG4 (ENSCAFG00845017809)	SLC22A23 (ENSCAFG00845017898) #34	ENSCAFG00845018193 #35
Laurasiatheria_c	ANCESTRAL SPECIES	6											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Chiroptera	ANCESTRAL SPECIES																	ENSGT00940000162303.b #22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00940000162303.b #22
Greater horseshoe bat	MODERN SPECIES	27						ENSRFEG00010002141	DUSP22 (ENSRFEG00010002106) #14	IRF4 (ENSRFEG00010002076) #15	EXOC2 (ENSRFEG00010002038) #16	ENSRFEG00010002006	ENSRFEG00010001997	ENSRFEG00010001986	FOXQ1 (ENSRFEG00010001977) #19	FOXF2 (ENSRFEG00010001962) #20	ENSRFEG00010001950	ENSRFEG00010001928 #22	NACA2 (ENSRFEG00010001919)	GMDS (ENSRFEG00010001869) #21	MYLK4 (ENSRFEG00010001828) #23	WRNIP1 (ENSRFEG00010001786) #24	ENSRFEG00010001768	SERPINB1 (ENSRFEG00010001747) #25	ENSRFEG00010001710 #27	ENSRFEG00010001648 #26	ENSRFEG00010001556 #26	NQO2 (ENSRFEG00010001518) #28	ENSRFEG00010001506	RIPK1 (ENSRFEG00010001467) #29	BPHL (ENSRFEG00010001423) #30	TUBB2B (ENSRFEG00010001382) #32	PSMG4 (ENSRFEG00010001338)
Equus	ANCESTRAL SPECIES	47											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519 #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150.xb #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Donkey	MODERN SPECIES	27	ENSEASG00005001213	ENSEASG00005001206	NDUFV2 (ENSEASG00005001191)	ENSEASG00005035592	ENSEASG00005002944	PTPRM (ENSEASG00005020034)	LRRC30 (ENSEASG00005038624)	LAMA1 (ENSEASG00005019622)	ENSEASG00005019429	ENSEASG00005019406	ENSEASG00005027632	ENSEASG00005012235 #14	IRF4 (ENSEASG00005012225) #15	EXOC2 (ENSEASG00005012215) #16	FOXF2 (ENSEASG00005012206) #20	ENSEASG00005031584 #22	GMDS (ENSEASG00005012197) #21	MYLK4 (ENSEASG00005012193) #23	WRNIP1 (ENSEASG00005012190) #24	SERPINB1 (ENSEASG00005012189) #25	SERPINB9 (ENSEASG00005012183) #26	ENSEASG00005012179 #27	NQO2 (ENSEASG00005012177) #28	RIPK1 (ENSEASG00005012175) #29	BPHL (ENSEASG00005012172) #30	TUBB2A (ENSEASG00005030900) #32	ENSEASG00005012165	TUBB2B (ENSEASG00005032707) #32	PSMG4 (ENSEASG00005012153)	SLC22A23 (ENSEASG00005012146) #34	ENSEASG00005012139 #35
Horse	MODERN SPECIES	12											DUSP22 (ENSECAG00000014558) #14	IRF4 (ENSECAG00000016808) #15	EXOC2 (ENSECAG00000000078) #16	ENSECAG00000046100	FOXQ1 (ENSECAG00000034522) #19	FOXC1 (ENSECAG00000029381) #22	GMDS (ENSECAG00000001999) #21	ENSECAG00000060133	MYLK4 (ENSECAG00000006224) #23	WRNIP1 (ENSECAG00000008348) #24	SERPINB1 (ENSECAG00000009896) #25	SERPINB9 (ENSECAG00000012506) #26	SERPINB6 (ENSECAG00000015966) #27	NQO2 (ENSECAG00000008386) #28	RIPK1 (ENSECAG00000010293) #29	BPHL (ENSECAG00000013049) #30	TUBB (ENSECAG00000020234) #32	TUBB2B (ENSECAG00000058458) #32	ENSECAG00000013813	SLC22A23 (ENSECAG00000013821) #34	PXDC1 (ENSECAG00000014479) #35
Euarchontoglires	ANCESTRAL SPECIES	7											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154519.g.b #27	ENSGT00940000154931 #26	ENSGT00940000154519.h #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804
Primates	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36
Strepsirrhini	ANCESTRAL SPECIES	29											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Lemuriformes	ANCESTRAL SPECIES	63											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Lemuriformes_a	ANCESTRAL SPECIES	166											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Coquerels sifaka	MODERN SPECIES	497															FOXF2 (ENSPCOG00000022131) #20	FOXC1 (ENSPCOG00000026920) #22	GMDS (ENSPCOG00000028639) #21	ENSPCOG00000019865	MYLK4 (ENSPCOG00000026431) #23	ENSPCOG00000020178	WRNIP1 (ENSPCOG00000017172) #24	SERPINB1 (ENSPCOG00000003266) #25	SERPINB9 (ENSPCOG00000025594) #26	SERPINB6 (ENSPCOG00000019023) #27	NQO2 (ENSPCOG00000017951) #28	RIPK1 (ENSPCOG00000024336) #29	BPHL (ENSPCOG00000020939) #30	TUBB2B (ENSPCOG00000015941) #32	ENSPCOG00000020515 #32	PSMG4 (ENSPCOG00000014849)	SLC22A23 (ENSPCOG00000007966) #34
Haplorrhini	ANCESTRAL SPECIES	2											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36
Simiiformes	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00390000006707.w.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Platyrrhini	ANCESTRAL SPECIES	34										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000001231.s.a	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00390000006707.w.b	ENSGT00940000159347 #29	ENSGT00390000004746.c.a #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209.e.a #35	ENSGT00390000009209.f #35
Mas night monkey	MODERN SPECIES	892									DUSP22 (ENSANAG00000034975) #14	ENSANAG00000029204	IRF4 (ENSANAG00000035286) #15	EXOC2 (ENSANAG00000022436) #16	FOXQ1 (ENSANAG00000011580) #19	FOXF2 (ENSANAG00000029212) #20	ENSANAG00000027478	FOXC1 (ENSANAG00000026686) #22	GMDS (ENSANAG00000026640) #21	MYLK4 (ENSANAG00000022908) #23	WRNIP1 (ENSANAG00000032434) #24	SERPINB1 (ENSANAG00000019955) #25	SERPINB9 (ENSANAG00000030714) #26	SERPINB6 (ENSANAG00000033957) #27
Catarrhini	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00910000147563	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Cercopithecidae	ANCESTRAL SPECIES	4											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00910000147563	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00940000154295.y.b.b
Cercopithecinae	ANCESTRAL SPECIES	6										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000001231.s.a.a.b	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00940000154295.y.b.b	ENSGT00390000009209 #35
Vervet Monkey	MODERN SPECIES	8										DUSP22 (ENSCSAG00000007160) #14	IRF4 (ENSCSAG00000007164) #15	EXOC2 (ENSCSAG00000007171) #16	ENSCSAG00000007177	FOXQ1 (ENSCSAG00000019113) #19	FOXF2 (ENSCSAG00000007180) #20	FOXC1 (ENSCSAG00000019112) #22	ENSCSAG00000007184 #21	MYLK4 (ENSCSAG00000007191) #23	WRNIP1 (ENSCSAG00000007198) #24	SERPINB1 (ENSCSAG00000007203) #25	SERPINB9 (ENSCSAG00000007207) #26	SERPINB6 (ENSCSAG00000007210) #27	NQO2 (ENSCSAG00000007218) #28	RIPK1 (ENSCSAG00000007224) #29	BPHL (ENSCSAG00000007243) #30	TUBB2A (ENSCSAG00000007247) #32	TUBB2B (ENSCSAG00000007249) #32	PSMG4 (ENSCSAG00000007253)	SLC22A23 (ENSCSAG00000007261) #34	PXDC1 (ENSCSAG00000007263) #35	FAM50B (ENSCSAG00000019111) #36
Cercopithecinae_a	ANCESTRAL SPECIES	6										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000001231.s.a.a.b	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00950000183029.B.c.b.b.b.u.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00940000154295.y.b.b
Macaca	ANCESTRAL SPECIES	23										ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000001231.s.a.a.b	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00950000183029.B.c.b.b.b.u.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00940000154295.y.b.b	ENSGT00390000009209 #35
Macaca_a	ANCESTRAL SPECIES	24										ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.a.b	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Rhesus	MODERN SPECIES	14										ENSMMUG00000049765	DUSP22 (ENSMMUG00000018514) #14	IRF4 (ENSMMUG00000018513) #15	EXOC2 (ENSMMUG00000023558) #16	FOXQ1 (ENSMMUG00000059043) #19	FOXF2 (ENSMMUG00000004540) #20	FOXC1 (ENSMMUG00000005778) #22	GMDS (ENSMMUG00000005779) #21	MYLK4 (ENSMMUG00000007144) #23	WRNIP1 (ENSMMUG00000007143) #24	SERPINB1 (ENSMMUG00000042368) #25	SERPINB9 (ENSMMUG00000011719) #26	SERPINB6 (ENSMMUG00000037816) #27	NQO2 (ENSMMUG00000008487) #28	RIPK1 (ENSMMUG00000008485) #29	BPHL (ENSMMUG00000008483) #30	TUBB2B (ENSMMUG00000023785) #32	PSMG4 (ENSMMUG00000011031)	SLC22A23 (ENSMMUG00000001371) #34	PXDC1 (ENSMMUG00000010926) #35	FAM50B (ENSMMUG00000039209) #36	PRPF4B (ENSMMUG00000014017) #37
Pig-tailed macaque	MODERN SPECIES	136																FOXC1 (ENSMNEG00000006978) #22	GMDS (ENSMNEG00000035111) #21	ENSMNEG00000036375	ENSMNEG00000035768	MYLK4 (ENSMNEG00000033807) #23	WRNIP1 (ENSMNEG00000032509) #24	SERPINB1 (ENSMNEG00000031098) #25	SERPINB9 (ENSMNEG00000018071) #26	SERPINB6 (ENSMNEG00000038077) #27	NQO2 (ENSMNEG00000039080) #28	ENSMNEG00000030982	RIPK1 (ENSMNEG00000029731) #29	BPHL (ENSMNEG00000034992) #30	ENSMNEG00000030834 #32	TUBB2B (ENSMNEG00000000042) #32	PSMG4 (ENSMNEG00000045254)
Cercopithecinae_b	ANCESTRAL SPECIES	37											ENSGT00940000157153.s #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00950000183029.B.c.b.b.b.u.b	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Olive baboon	MODERN SPECIES	16											DUSP22 (ENSPANG00000018613) #14	IRF4 (ENSPANG00000023389) #15	EXOC2 (ENSPANG00000010769) #16	FOXQ1 (ENSPANG00000037731) #19	FOXF2 (ENSPANG00000044013) #20	FOXC1 (ENSPANG00000011156) #22	GMDS (ENSPANG00000020544) #21	MYLK4 (ENSPANG00000007409) #23	WRNIP1 (ENSPANG00000044052) #24	ENSPANG00000041893	SERPINB1 (ENSPANG00000030460) #25	ENSPANG00000015755 #26	NQO2 (ENSPANG00000033064) #28	ENSPANG00000033442	ENSPANG00000038780	RIPK1 (ENSPANG00000024400) #29	TUBB2B (ENSPANG00000047634) #32	PSMG4 (ENSPANG00000007366)	SLC22A23 (ENSPANG00000023485) #34	ENSPANG00000037486 #35	FAM50B (ENSPANG00000006202) #36
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000162303.b #22
Black snub-nosed monkey	MODERN SPECIES	2010																ENSRBIG00000032039 #22
Hominoidea	ANCESTRAL SPECIES	4											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00910000147563	ENSGT00940000156563 #28	ENSGT00390000006707.w.b.c.a.a	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34
Gibbon	MODERN SPECIES	23	RNF170 (ENSNLEG00000012949)	HOOK3 (ENSNLEG00000012953)	ENSNLEG00000012979	POMK (ENSNLEG00000012982)	HGSNAT (ENSNLEG00000029760)	ENSNLEG00000013005	ENSNLEG00000031617	ENSNLEG00000013008	DUSP22 (ENSNLEG00000010621) #14	IRF4 (ENSNLEG00000010631) #15	ENSNLEG00000027330	EXOC2 (ENSNLEG00000010643) #16	ENSNLEG00000018872	ENSNLEG00000010829 #20	ENSNLEG00000029356	ENSNLEG00000010830 #22	GMDS (ENSNLEG00000010832) #21	ENSNLEG00000035231	MYLK4 (ENSNLEG00000010906) #23	WRNIP1 (ENSNLEG00000010928) #24	SERPINB1 (ENSNLEG00000010958) #25	SERPINB9 (ENSNLEG00000031330) #26	SERPINB6 (ENSNLEG00000011022) #27	ENSNLEG00000029196	NQO2 (ENSNLEG00000011051) #28	ENSNLEG00000011073	RIPK1 (ENSNLEG00000011075) #29	BPHL (ENSNLEG00000028923) #30	TUBB2A (ENSNLEG00000031860) #32	TUBB2B (ENSNLEG00000011121) #32	ENSNLEG00000011266
Hominidae	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00390000006707.w.b.c.a.a	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Orangutan	MODERN SPECIES	19											DUSP22 (ENSPPYG00000016160) #14	IRF4 (ENSPPYG00000016161) #15	EXOC2 (ENSPPYG00000016162) #16	FOXQ1 (ENSPPYG00000016165) #19	FOXF2 (ENSPPYG00000016166) #20	FOXC1 (ENSPPYG00000016167) #22	GMDS (ENSPPYG00000016168) #21	MYLK4 (ENSPPYG00000016170) #23	WRNIP1 (ENSPPYG00000041417) #24	SERPINB1 (ENSPPYG00000016172) #25	SERPINB9 (ENSPPYG00000016173) #26	SERPINB6 (ENSPPYG00000016174) #27	NQO2 (ENSPPYG00000016176) #28	RIPK1 (ENSPPYG00000016178) #29	BPHL (ENSPPYG00000016179) #30	TUBB2B (ENSPPYG00000016180) #32	ENSPPYG00000016181	SLC22A23 (ENSPPYG00000016182) #34	PXDC1 (ENSPPYG00000041429) #35	FAM50B (ENSPPYG00000016184) #36	PRPF4B (ENSPPYG00000016187) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00390000006707.w.b.c.a.a	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Gorilla	MODERN SPECIES	19									DUSP22 (ENSGGOG00000004744) #14	IRF4 (ENSGGOG00000012342) #15	EXOC2 (ENSGGOG00000005415) #16	HUS1B (ENSGGOG00000007415)	ENSGGOG00000038740 #19	FOXF2 (ENSGGOG00000013479) #20	ENSGGOG00000022142	ENSGGOG00000009269 #22	GMDS (ENSGGOG00000005663) #21	MYLK4 (ENSGGOG00000004856) #23	WRNIP1 (ENSGGOG00000022046) #24	SERPINB1 (ENSGGOG00000007770) #25	SERPINB9 (ENSGGOG00000038562) #26	SERPINB6 (ENSGGOG00000016546) #27	NQO2 (ENSGGOG00000011077) #28	RIPK1 (ENSGGOG00000012589) #29	BPHL (ENSGGOG00000012596) #30	ENSGGOG00000041508 #32	TUBB2B (ENSGGOG00000002310) #32	ENSGGOG00000012606	SLC22A23 (ENSGGOG00000012609) #34	PXDC1 (ENSGGOG00000000462) #35	ENSGGOG00000044208
Homo/Pan group	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00390000006707.w.b.c.a.a	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Human	MODERN SPECIES	18										DUSP22 (ENSG00000112679) #14	IRF4 (ENSG00000137265) #15	EXOC2 (ENSG00000112685) #16	HUS1B (ENSG00000188996)	FOXQ1 (ENSG00000164379) #19	FOXF2 (ENSG00000137273) #20	FOXC1 (ENSG00000054598) #22	GMDS (ENSG00000112699) #21	MYLK4 (ENSG00000145949) #23	WRNIP1 (ENSG00000124535) #24	SERPINB1 (ENSG00000021355) #25	SERPINB9 (ENSG00000170542) #26	SERPINB6 (ENSG00000124570) #27	NQO2 (ENSG00000124588) #28	RIPK1 (ENSG00000137275) #29	BPHL (ENSG00000137274) #30	TUBB2A (ENSG00000137267) #32	TUBB2B (ENSG00000137285) #32	PSMG4 (ENSG00000180822)	SLC22A23 (ENSG00000137266) #34	PXDC1 (ENSG00000168994) #35	FAM50B (ENSG00000145945) #36
Pan	ANCESTRAL SPECIES	29											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00910000147105	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00390000006707.w.b.c.a.a	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Chimpanzee	MODERN SPECIES	19										DUSP22 (ENSPTRG00000017654) #14	IRF4 (ENSPTRG00000017656) #15	EXOC2 (ENSPTRG00000017657) #16	FOXQ1 (ENSPTRG00000029883) #19	FOXF2 (ENSPTRG00000017662) #20	ENSPTRG00000046603	FOXC1 (ENSPTRG00000051406) #22	GMDS (ENSPTRG00000017663) #21	ENSPTRG00000047752	MYLK4 (ENSPTRG00000017665) #23	WRNIP1 (ENSPTRG00000017666) #24	SERPINB1 (ENSPTRG00000017667) #25	SERPINB9 (ENSPTRG00000017668) #26	SERPINB6 (ENSPTRG00000017669) #27	NQO2 (ENSPTRG00000017670) #28	ENSPTRG00000048006	RIPK1 (ENSPTRG00000017672) #29	BPHL (ENSPTRG00000017673) #30	ENSPTRG00000044345 #32	ENSPTRG00000048005 #32	ENSPTRG00000050739 #32	PSMG4 (ENSPTRG00000033938)
Euarchontoglires_A	ANCESTRAL SPECIES	6											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Glires	ANCESTRAL SPECIES	5											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000162303.b #22
Pika	MODERN SPECIES	10366																ENSOPRG00000014675 #22
Rodentia	ANCESTRAL SPECIES	6											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Rodentia_B	ANCESTRAL SPECIES	8											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Kangaroo rat	MODERN SPECIES	351												Dusp22 (ENSDORG00000007227) #14	Irf4 (ENSDORG00000014895) #15	Exoc2 (ENSDORG00000008782) #16	Foxf2 (ENSDORG00000001552) #20	Foxc1 (ENSDORG00000006796) #22	Gmds (ENSDORG00000006797) #21	Mylk4 (ENSDORG00000000510) #23	Wrnip1 (ENSDORG00000003946) #24	ENSDORG00000003777 #25	ENSDORG00000026119 #25	ENSDORG00000027278 #26	ENSDORG00000001371	Nqo2 (ENSDORG00000010390) #28	Ripk1 (ENSDORG00000010392) #29	ENSDORG00000029944	ENSDORG00000011196	ENSDORG00000028660	Cdyl (ENSDORG00000002812)	ENSDORG00000023689	ENSDORG00000004072
Myomorpha	ANCESTRAL SPECIES	11											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Lesser Egyptian jerboa	MODERN SPECIES	129												Dusp22 (ENSJJAG00000019867) #14	Irf4 (ENSJJAG00000019182) #15	ENSJJAG00000017878 #16	Foxf2 (ENSJJAG00000017530) #20	ENSJJAG00000015833 #22	Gmds (ENSJJAG00000015490) #21	ENSJJAG00000013456 #23	Wrnip1 (ENSJJAG00000011299) #24	ENSJJAG00000010900 #25	ENSJJAG00000017382 #26	ENSJJAG00000015735 #27	Nqo2 (ENSJJAG00000015012) #28	Ripk1 (ENSJJAG00000013771) #29	Bphl (ENSJJAG00000012949) #30	Tubb2b (ENSJJAG00000011739) #32	Psmg4 (ENSJJAG00000011408)	Slc22a23 (ENSJJAG00000005711) #34	Pxdc1 (ENSJJAG00000012785) #35	Prpf4b (ENSJJAG00000011217) #37	ENSJJAG00000010338
Muroidea	ANCESTRAL SPECIES	15									ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	960								Agtr1a (ENSNGAG00000001950)	Uqcrfs1 (ENSNGAG00000001109)	Dusp22 (ENSNGAG00000021364) #14	Irf4 (ENSNGAG00000020771) #15	ENSNGAG00000019248 #16	ENSNGAG00000017632	Foxq1 (ENSNGAG00000011384) #19	Foxf2 (ENSNGAG00000011181) #20	ENSNGAG00000007865 #22	Gmds (ENSNGAG00000021851) #21	Mylk4 (ENSNGAG00000016589) #23	Wrnip1 (ENSNGAG00000022017) #24	ENSNGAG00000007869 #25	ENSNGAG00000020541 #26	ENSNGAG00000018961 #27
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00950000182818.A.f.b.a.b.a	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b.a #27	ENSGT00940000154519.g.b.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34
Cricetidae	ANCESTRAL SPECIES	22	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00950000182818.A.f.b.a.b.a	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b.a.c.b #27	ENSGT00940000154519.g.b.a.d #27	ENSGT00940000154519.g.b.a.c.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804
Cricetinae	ANCESTRAL SPECIES	20	ENSGT00950000182818.A.f.b.b.b	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573 #25	ENSGT00940000154931.d.j #26	ENSGT00940000154519.g.b.a.c.b #27	ENSGT00940000154931.d.i #26	ENSGT00940000154519.g.b.a.c.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34
Golden Hamster	MODERN SPECIES	623	Prl5a1 (ENSMAUG00000018024)	Sox4 (ENSMAUG00000001434)	Cdkal1 (ENSMAUG00000020796)	E2f3 (ENSMAUG00000019714)	ENSMAUG00000018470	Mboat1 (ENSMAUG00000017913)	Agtr1a (ENSMAUG00000017279)	Uqcrfs1 (ENSMAUG00000016767)	Dusp22 (ENSMAUG00000016397) #14	Irf4 (ENSMAUG00000015575) #15	Exoc2 (ENSMAUG00000015195) #16	ENSMAUG00000014057	ENSMAUG00000013208	Foxq1 (ENSMAUG00000018519) #19	Foxf2 (ENSMAUG00000012470) #20	Foxc1 (ENSMAUG00000018460) #22	Gmds (ENSMAUG00000011976) #21	Mylk4 (ENSMAUG00000011053) #23	Wrnip1 (ENSMAUG00000009914) #24	ENSMAUG00000009659 #25	ENSMAUG00000009345 #26	ENSMAUG00000009098 #27	ENSMAUG00000008075 #26	ENSMAUG00000001439 #26	ENSMAUG00000001093 #27	Nqo2 (ENSMAUG00000000875) #28	Ripk1 (ENSMAUG00000000557) #29	Bphl (ENSMAUG00000000408) #30	Tubb2a (ENSMAUG00000018540) #32	ENSMAUG00000018054 #32	Psmg4 (ENSMAUG00000017755)
Chinese hamster chok1gshd	MODERN SPECIES	317	ENSCGRG00001000972	Prl4a1 (ENSCGRG00001018885)	Prl5a1 (ENSCGRG00001023618)	Sox4 (ENSCGRG00001004088)	Cdkal1 (ENSCGRG00001010740)	E2f3 (ENSCGRG00001024916)	Mboat1 (ENSCGRG00001025065)	Agtr1a (ENSCGRG00001009515)	Uqcrfs1 (ENSCGRG00001008222)	Dusp22 (ENSCGRG00001010384) #14	Irf4 (ENSCGRG00001016836) #15	Exoc2 (ENSCGRG00001019674) #16	ENSCGRG00001013162	Foxq1 (ENSCGRG00001006043) #19	Foxf2 (ENSCGRG00001022972) #20	Foxc1 (ENSCGRG00001005886) #22	Gmds (ENSCGRG00001014163) #21	ENSCGRG00001020761	Mylk4 (ENSCGRG00001012998) #23	Wrnip1 (ENSCGRG00001020075) #24	ENSCGRG00001007544	ENSCGRG00001000139 #25	ENSCGRG00001009851	ENSCGRG00001014514 #26	ENSCGRG00001021359	ENSCGRG00001022043 #26	ENSCGRG00001020665 #27	ENSCGRG00001015437 #27	Nqo2 (ENSCGRG00001004425) #28	Ripk1 (ENSCGRG00001014419) #29	Bphl (ENSCGRG00001014124) #30
Cricetidae_B	ANCESTRAL SPECIES	22	ENSGT00950000182818.A.f.b.b.b	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00950000182818.A.f.b.a.b.a	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b.a.d #27	ENSGT00940000154519.g.b.a.c.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000175246	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34
Prairie vole	MODERN SPECIES	3	Sox4 (ENSMOCG00000004505)	ENSMOCG00000002429	Cdkal1 (ENSMOCG00000022160)	E2f3 (ENSMOCG00000022923)	Mboat1 (ENSMOCG00000004726)	ENSMOCG00000019499	Uqcrfs1 (ENSMOCG00000014738)	ENSMOCG00000007870 #14	Irf4 (ENSMOCG00000017633) #15	Exoc2 (ENSMOCG00000022998) #16	Hus1b (ENSMOCG00000002316)	ENSMOCG00000000826	Foxq1 (ENSMOCG00000005340) #19	Foxf2 (ENSMOCG00000010276) #20	ENSMOCG00000002929	Foxc1 (ENSMOCG00000006436) #22	Gmds (ENSMOCG00000018203) #21	Mylk4 (ENSMOCG00000014428) #23	ENSMOCG00000019965	Wrnip1 (ENSMOCG00000002819) #24	ENSMOCG00000021377 #25	ENSMOCG00000000987 #26	ENSMOCG00000016281 #27	ENSMOCG00000010614 #26	ENSMOCG00000004352 #26	ENSMOCG00000011182 #27	ENSMOCG00000019022	ENSMOCG00000016676 #27	ENSMOCG00000000484 #27	Nqo2 (ENSMOCG00000007454) #28	Ripk1 (ENSMOCG00000002677) #29
Northern American deer mouse	MODERN SPECIES	18	Prl5a1 (ENSPEMG00000022650)	ENSPEMG00000026740	Sox4 (ENSPEMG00000013688)	Cdkal1 (ENSPEMG00000009808)	E2f3 (ENSPEMG00000011070)	Mboat1 (ENSPEMG00000028788)	Agtr1a (ENSPEMG00000029887)	Uqcrfs1 (ENSPEMG00000012221)	Dusp22 (ENSPEMG00000012769) #14	Irf4 (ENSPEMG00000012922) #15	Exoc2 (ENSPEMG00000014307) #16	Hus1b (ENSPEMG00000013275)	ENSPEMG00000023016	Foxq1 (ENSPEMG00000029927) #19	Foxf2 (ENSPEMG00000017102) #20	Foxc1 (ENSPEMG00000025795) #22	Gmds (ENSPEMG00000018701) #21	ENSPEMG00000000084 #23	Wrnip1 (ENSPEMG00000000543) #24	ENSPEMG00000030799	ENSPEMG00000003771 #25	ENSPEMG00000024282 #26	ENSPEMG00000007226 #27	ENSPEMG00000007216 #26	ENSPEMG00000025946 #26	ENSPEMG00000029739 #27	ENSPEMG00000011189 #26	ENSPEMG00000006842 #27	ENSPEMG00000030940 #27	Nqo2 (ENSPEMG00000022103) #28	Ripk1 (ENSPEMG00000014892) #29
Murinae	ANCESTRAL SPECIES	21	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00950000182818.A.f.b.a.b.a	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573.k.a #25	ENSGT00940000154573.l #25	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154931.d.o.a.a #26	ENSGT00940000154931.d.o.a.b #26	ENSGT00940000154573.k.b #25	ENSGT00940000154519.g.b.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32
Mus	ANCESTRAL SPECIES	18	ENSGT00950000182818.A.f.b.b.b	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573.k.a #25	ENSGT00940000154573.k.b #25	ENSGT00940000154931.d.o.a.b #26	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154931.d.o.a.a #26	ENSGT00940000154931.d.p #26	ENSGT00940000154931.d.o.b #26	ENSGT00940000154519.g.b.a.a.a.b.a #27	ENSGT00940000154519.g.b.a.a.b.a #27	ENSGT00940000154519.g.b.a.a.a.a #27	ENSGT00940000154519.g.b.b #27
Mus_A	ANCESTRAL SPECIES	14	ENSGT00950000182818.A.f.b.b.b	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573.k.a #25	ENSGT00940000154573.k.b #25	ENSGT00940000154931.d.o.a.b #26	ENSGT00940000154573.l #25	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154931.d.o.a.a #26	ENSGT00940000154519.g.a #27	ENSGT00940000154519.g.b.a.a.a.a #27	ENSGT00940000154519.g.b.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29
Mus_B	ANCESTRAL SPECIES	13	ENSGT00950000182818.A.f.b.b.b	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573.k.a #25	ENSGT00940000154573.l #25	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154931.d.o.a.a #26	ENSGT00940000154931.d.o.a.b #26	ENSGT00940000154573.k.b #25	ENSGT00940000154931.d.p #26	ENSGT00940000154931.d.o.b.b #26	ENSGT00940000154931.d.o.b.a.a #26	ENSGT00940000154519.g.b.a.a.a.b.a #27	ENSGT00940000154519.g.b.a.a.b.a #27
Mus_C	ANCESTRAL SPECIES	10	ENSGT00950000182818.A.f.b.b.b	ENSGT00950000182818.A.f.b.a.b.b	ENSGT00940000161470	ENSGT00940000155952	ENSGT00940000155115.a.a	ENSGT01030000234564.a.a.a.a.a	ENSGT01050000244888.b.a.c.b.g	ENSGT00390000001014	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00860000135627	ENSGT00860000135685	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT01000000215059	ENSGT00940000154573.k.a #25	ENSGT00940000154573.l #25	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154931.d.o.a.a #26	ENSGT00940000154931.d.o.a.b #26	ENSGT00940000154573.k.b #25	ENSGT00940000154931.d.p #26	ENSGT00940000154931.d.o.b.b #26	ENSGT00940000154931.d.o.b.a.b #26	ENSGT00940000154931.d.o.b.a.a #26	ENSGT00940000154519.g.b.a.a.a.b.a #27
Steppe mouse	MODERN SPECIES	2907														Foxq1 (ENSMSIG00000012808) #19	Foxf2 (ENSMSIG00000012814) #20	Foxc1 (ENSMSIG00000012835) #22	Gmds (ENSMSIG00000012840) #21	ENSMSIG00000012867 #23	Wrnip1 (ENSMSIG00000012927) #24	ENSMSIG00000012960	Serpinb1a (ENSMSIG00000012962) #25	Serpinb1c (ENSMSIG00000012970) #25	Serpinb6b (ENSMSIG00000012982) #27	Serpinb9 (ENSMSIG00000013005) #26	Serpinb9b (ENSMSIG00000013028) #26	Serpinb1b (ENSMSIG00000013045) #25	Serpinb9c (ENSMSIG00000013069) #26	Serpinb9d (ENSMSIG00000013119) #26
spretus	MODERN SPECIES	4	Prl5a1 (MGP_SPRETEiJ_G0019254)	Sox4 (MGP_SPRETEiJ_G0019255)	Cdkal1 (MGP_SPRETEiJ_G0019256)	E2f3 (MGP_SPRETEiJ_G0019257)	Mboat1 (MGP_SPRETEiJ_G0019258)	Agtr1a (MGP_SPRETEiJ_G0019259)	Uqcrfs1 (MGP_SPRETEiJ_G0019260)	Dusp22 (MGP_SPRETEiJ_G0019261) #14	Irf4 (MGP_SPRETEiJ_G0019262) #15	Exoc2 (MGP_SPRETEiJ_G0019263) #16	Hus1b (MGP_SPRETEiJ_G0019264)	MGP_SPRETEiJ_G0019265	MGP_SPRETEiJ_G0019266	Foxq1 (MGP_SPRETEiJ_G0019267) #19	Foxf2 (MGP_SPRETEiJ_G0019268) #20	Foxc1 (MGP_SPRETEiJ_G0019269) #22	Gmds (MGP_SPRETEiJ_G0019270) #21	MGP_SPRETEiJ_G0019271 #23	Wrnip1 (MGP_SPRETEiJ_G0019272) #24	MGP_SPRETEiJ_G0019273	MGP_SPRETEiJ_G0019274 #25	MGP_SPRETEiJ_G0019275 #25	Serpinb6b (MGP_SPRETEiJ_G0019276) #27	Serpinb9 (MGP_SPRETEiJ_G0019277) #26	MGP_SPRETEiJ_G0019278 #26	Serpinb9c (MGP_SPRETEiJ_G0019279) #26	MGP_SPRETEiJ_G0019280 #26	MGP_SPRETEiJ_G0019281 #26	MGP_SPRETEiJ_G0019282 #26	MGP_SPRETEiJ_G0019283 #26	MGP_SPRETEiJ_G0019284 #26
Mouse	MODERN SPECIES	4	Prl2c1 (ENSMUSG00000062551)	Prl4a1 (ENSMUSG00000005891)	Prl5a1 (ENSMUSG00000017064)	Sox4 (ENSMUSG00000076431)	Cdkal1 (ENSMUSG00000006191)	E2f3 (ENSMUSG00000016477)	Mboat1 (ENSMUSG00000038732)	Agtr1a (ENSMUSG00000049115)	Uqcrfs1 (ENSMUSG00000038462)	Dusp22 (ENSMUSG00000069255) #14	Irf4 (ENSMUSG00000021356) #15	Exoc2 (ENSMUSG00000021357) #16	Hus1b (ENSMUSG00000076430)	Foxq1 (ENSMUSG00000038415) #19	Foxf2 (ENSMUSG00000038402) #20	Foxc1 (ENSMUSG00000050295) #22	Gmds (ENSMUSG00000038372) #21	Mylk4 (ENSMUSG00000044951) #23	Wrnip1 (ENSMUSG00000021400) #24	Serpinb1a (ENSMUSG00000044734) #25	Serpinb1c (ENSMUSG00000079049) #25	Serpinb6b (ENSMUSG00000042842) #27	Serpinb9 (ENSMUSG00000045827) #26	Serpinb9b (ENSMUSG00000021403) #26	Serpinb1b (ENSMUSG00000051029) #25	Serpinb9c (ENSMUSG00000021404) #26	Serpinb9d (ENSMUSG00000054266) #26	Serpinb9e (ENSMUSG00000062342) #26	Serpinb9f (ENSMUSG00000038327) #26	Serpinb9h (ENSMUSG00000071452) #26	Serpinb9g (ENSMUSG00000057726) #26
Ryukyu mouse	MODERN SPECIES	4	Prl5a1 (MGP_CAROLIEiJ_G0018385)	Sox4 (MGP_CAROLIEiJ_G0018386)	Cdkal1 (MGP_CAROLIEiJ_G0018387)	E2f3 (MGP_CAROLIEiJ_G0018388)	Mboat1 (MGP_CAROLIEiJ_G0018389)	Agtr1a (MGP_CAROLIEiJ_G0018390)	Uqcrfs1 (MGP_CAROLIEiJ_G0018391)	Dusp22 (MGP_CAROLIEiJ_G0018392) #14	Irf4 (MGP_CAROLIEiJ_G0018393) #15	Exoc2 (MGP_CAROLIEiJ_G0018394) #16	Hus1b (MGP_CAROLIEiJ_G0018395)	MGP_CAROLIEiJ_G0018396	MGP_CAROLIEiJ_G0018397	Foxq1 (MGP_CAROLIEiJ_G0018398) #19	Foxf2 (MGP_CAROLIEiJ_G0018399) #20	Foxc1 (MGP_CAROLIEiJ_G0018400) #22	Gmds (MGP_CAROLIEiJ_G0018401) #21	MGP_CAROLIEiJ_G0018402 #23	Wrnip1 (MGP_CAROLIEiJ_G0018403) #24	MGP_CAROLIEiJ_G0018404	Serpinb1a (MGP_CAROLIEiJ_G0018405) #25	MGP_CAROLIEiJ_G0018406 #25	Serpinb6b (MGP_CAROLIEiJ_G0018407) #27	Serpinb9 (MGP_CAROLIEiJ_G0018408) #26	MGP_CAROLIEiJ_G0018409 #26	MGP_CAROLIEiJ_G0018410 #26	MGP_CAROLIEiJ_G0018411 #26	MGP_CAROLIEiJ_G0018412 #27	Serpinb6c (MGP_CAROLIEiJ_G0018413) #27	Serpinb6a (MGP_CAROLIEiJ_G0018414) #27	Nqo2 (MGP_CAROLIEiJ_G0018415) #28
Shrew mouse	MODERN SPECIES	7	Prl4a1 (MGP_PahariEiJ_G0019449)	Prl5a1 (MGP_PahariEiJ_G0019450)	Sox4 (MGP_PahariEiJ_G0019451)	Cdkal1 (MGP_PahariEiJ_G0019452)	E2f3 (MGP_PahariEiJ_G0019453)	Mboat1 (MGP_PahariEiJ_G0019454)	Agtr1a (MGP_PahariEiJ_G0019455)	Uqcrfs1 (MGP_PahariEiJ_G0019456)	Dusp22 (MGP_PahariEiJ_G0019457) #14	Irf4 (MGP_PahariEiJ_G0019458) #15	Exoc2 (MGP_PahariEiJ_G0019459) #16	Hus1b (MGP_PahariEiJ_G0019460)	MGP_PahariEiJ_G0019461	Foxq1 (MGP_PahariEiJ_G0019462) #19	Foxf2 (MGP_PahariEiJ_G0019463) #20	Foxc1 (MGP_PahariEiJ_G0019464) #22	Gmds (MGP_PahariEiJ_G0019465) #21	MGP_PahariEiJ_G0019466 #23	Wrnip1 (MGP_PahariEiJ_G0019467) #24	MGP_PahariEiJ_G0019468	Serpinb1a (MGP_PahariEiJ_G0019469) #25	MGP_PahariEiJ_G0019470 #25	Serpinb6b (MGP_PahariEiJ_G0019471) #27	Serpinb9 (MGP_PahariEiJ_G0019472) #26	Serpinb9c (MGP_PahariEiJ_G0019473) #26	MGP_PahariEiJ_G0019474 #26	MGP_PahariEiJ_G0019475 #26	MGP_PahariEiJ_G0019476 #26	MGP_PahariEiJ_G0019477 #26	Serpinb6d (MGP_PahariEiJ_G0019478) #27	Serpinb6e (MGP_PahariEiJ_G0019479) #27
Rat	MODERN SPECIES	8	Sox4 (ENSRNOG00000065643)	ENSRNOG00000065771	Cdkal1 (ENSRNOG00000018381)	RGD1561310 (ENSRNOG00000062739)	ENSRNOG00000062512	E2f3 (ENSRNOG00000029273)	Mboat1 (ENSRNOG00000027125)	Agtr1a (ENSRNOG00000018346)	ENSRNOG00000070855	Uqcrfs1 (ENSRNOG00000018281)	Dusp22 (ENSRNOG00000056376) #14	Irf4 (ENSRNOG00000061070) #15	Exoc2 (ENSRNOG00000060266) #16	Foxq1 (ENSRNOG00000062314) #19	Foxf2 (ENSRNOG00000063796) #20	Foxc1 (ENSRNOG00000070919) #22	Gmds (ENSRNOG00000017605) #21	Mylk4 (ENSRNOG00000070083) #23	ENSRNOG00000063699	Wrnip1 (ENSRNOG00000017040) #24	Serpinb1a (ENSRNOG00000016581) #25	Serpinb6b (ENSRNOG00000016420) #27	Serpinb9 (ENSRNOG00000033772) #26	RGD1562844 (ENSRNOG00000048576) #26	Serpinb1b (ENSRNOG00000034229) #25	Serpinb9d (ENSRNOG00000022139) #26	Serpinb6e (ENSRNOG00000070025) #27	RGD1564786 (ENSRNOG00000063990) #27	Nqo2 (ENSRNOG00000017820) #28	Serpinb6a (ENSRNOG00000017962) #27	Ripk1 (ENSRNOG00000017787) #29
Rodentia_A	ANCESTRAL SPECIES	26											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154931.c.a.b #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000163682	ENSGT00940000163314	ENSGT00940000163016	ENSGT00940000162298	ENSGT00940000163102	ENSGT00940000159644	ENSGT00940000163521	ENSGT00940000161576	ENSGT00940000163165	ENSGT00940000163486	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00390000012138.a.b.t.ab	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154931.c.a.b #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34
Marmotini	ANCESTRAL SPECIES	121											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.c.b #26
Marmotini_b	ANCESTRAL SPECIES	234											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.c.b #26
Arctic ground squirrel	MODERN SPECIES	204							ENSUPAG00010005126	ENSUPAG00010005065 #27	ENSUPAG00010004463	DUSP22 (ENSUPAG00010004416) #14	IRF4 (ENSUPAG00010004398) #15	ENSUPAG00010004391	EXOC2 (ENSUPAG00010004362) #16	FOXQ1 (ENSUPAG00010004342) #19	FOXF2 (ENSUPAG00010004332) #20	FOXC1 (ENSUPAG00010004330) #22	GMDS (ENSUPAG00010004323) #21	MYLK4 (ENSUPAG00010004253) #23	ENSUPAG00010004244	WRNIP1 (ENSUPAG00010004233) #24	SERPINB1 (ENSUPAG00010004225) #25
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005014208	ENSSVLG00005014265	ENSSVLG00005014308	ENSSVLG00005014343	ENSSVLG00005014389	ENSSVLG00005014442	ENSSVLG00005014463 #14	IRF4 (ENSSVLG00005014508) #15	EXOC2 (ENSSVLG00005014600) #16	HUS1B (ENSSVLG00005014653)	ENSSVLG00005014684	ENSSVLG00005014698	ENSSVLG00005014724	FOXQ1 (ENSSVLG00005014773) #19	FOXF2 (ENSSVLG00005014790) #20	FOXC1 (ENSSVLG00005014837) #22	GMDS (ENSSVLG00005014861) #21	ENSSVLG00005006132	MYLK4 (ENSSVLG00005006200) #23	ENSSVLG00005006323	WRNIP1 (ENSSVLG00005006348) #24	SERPINB1 (ENSSVLG00005006417) #25	ENSSVLG00005006449 #26	ENSSVLG00005006719 #26	ENSSVLG00005007366	SERPINB6 (ENSSVLG00005007395) #27	NQO2 (ENSSVLG00005007475) #28	RIPK1 (ENSSVLG00005007529) #29	ENSSVLG00005007569 #30	TUBB2A (ENSSVLG00005007615) #32	TUBB2B (ENSSVLG00005007652) #32
Hystricomorpha	ANCESTRAL SPECIES	42	ENSGT00940000163016	ENSGT00940000162298	ENSGT00940000163102	ENSGT00940000159644.x	ENSGT00940000163521	ENSGT00940000161576	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b	ENSGT00940000164849	ENSGT00940000160281	ENSGT00940000153125.B	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT01000000215059	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B.b #36
Hystricomorpha_a	ANCESTRAL SPECIES	48	ENSGT00940000162298	ENSGT00940000163102	ENSGT00940000159644.w	ENSGT00940000163521	ENSGT00940000161576	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b	ENSGT00940000164849	ENSGT00940000160281	ENSGT00940000153125.C	ENSGT01100000263506.a.e.a.a.a.a.b.b	ENSGT01100000263474.a.b.b.f	ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B.b #36	ENSGT00940000155562 #37
Hystricomorpha_b	ANCESTRAL SPECIES	58												ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931.d #26	ENSGT00940000154519.g.b #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00940000155562 #37	ENSGT00940000154543.b
Degu	MODERN SPECIES	64	ENSODEG00000019469	ENSODEG00000019426	ZNF184 (ENSODEG00000008565)	PRSS16 (ENSODEG00000007095)	ENSODEG00000019617	ENSODEG00000019561	ENSODEG00000019618	ENSODEG00000006799	ENSODEG00000006390	ENSODEG00000007570	DUSP22 (ENSODEG00000006703) #14	IRF4 (ENSODEG00000007674) #15	ENSODEG00000019672	EXOC2 (ENSODEG00000006797) #16	FOXF2 (ENSODEG00000007607) #20	FOXC1 (ENSODEG00000006912) #22	ENSODEG00000007557	GMDS (ENSODEG00000009960) #21	MYLK4 (ENSODEG00000006897) #23	WRNIP1 (ENSODEG00000006805) #24	SERPINB1 (ENSODEG00000010241) #25	ENSODEG00000006906 #26	ENSODEG00000006648	ENSODEG00000006244 #26	SERPINB6 (ENSODEG00000008291) #27	NQO2 (ENSODEG00000006400) #28	RIPK1 (ENSODEG00000007668) #29	BPHL (ENSODEG00000008397) #30	TUBB2A (ENSODEG00000006689) #32	ENSODEG00000006037	ENSODEG00000006987 #32
Naked mole-rat female	MODERN SPECIES	28			ENSHGLG00000011763	ENSHGLG00000040689	ENSHGLG00000034563	ENSHGLG00000039066	ENSHGLG00000046877	HIST1H4I (ENSHGLG00000036883)	ENSHGLG00000033476	ENSHGLG00000008379 #14	IRF4 (ENSHGLG00000008061) #15	EXOC2 (ENSHGLG00000008005) #16	ENSHGLG00000044630	FOXQ1 (ENSHGLG00000007951) #19	FOXF2 (ENSHGLG00000007914) #20	FOXC1 (ENSHGLG00000040750) #22	GMDS (ENSHGLG00000014454) #21	ENSHGLG00000033368	ENSHGLG00000014288 #23	ENSHGLG00000040911	WRNIP1 (ENSHGLG00000014216) #24	SERPINB1 (ENSHGLG00000032738) #25	ENSHGLG00000017487 #26	SERPINB6 (ENSHGLG00000015274) #27	ENSHGLG00000045779 #28	RIPK1 (ENSHGLG00000008330) #29	BPHL (ENSHGLG00000008018) #30	ENSHGLG00000043950 #32	TUBB2B (ENSHGLG00000007696) #32	ENSHGLG00000007366 #33	SLC22A23 (ENSHGLG00000007033) #34
Atlantogenata	ANCESTRAL SPECIES	86											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.j #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36	ENSGT00940000155562 #37
Afrotheria	ANCESTRAL SPECIES	94											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.i.a.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00940000167514	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36
Afrotheria_a	ANCESTRAL SPECIES	96											ENSGT00940000157153 #14	ENSGT00940000159059 #15	ENSGT00390000010872 #16	ENSGT00940000162937.b #19	ENSGT00940000162527 #20	ENSGT00940000162303.b #22	ENSGT00440000033640 #21	ENSGT00940000156211.b #23	ENSGT00390000008538 #24	ENSGT00940000154573 #25	ENSGT00940000154931 #26	ENSGT00940000154519.i.a.a #27	ENSGT00940000156563 #28	ENSGT00940000159347 #29	ENSGT00390000004746 #30	ENSGT00940000154150 #32	ENSGT00940000167514	ENSGT00390000011804	ENSGT00940000157354 #34	ENSGT00390000009209 #35	ENSGT00390000004735.B #36
Elephant	MODERN SPECIES	447									ENSLAFG00000032503	DUSP22 (ENSLAFG00000018297) #14	IRF4 (ENSLAFG00000017235) #15	EXOC2 (ENSLAFG00000012946) #16	ENSLAFG00000030668	FOXQ1 (ENSLAFG00000000082) #19	FOXF2 (ENSLAFG00000002074) #20	FOXC1 (ENSLAFG00000028626) #22	ENSLAFG00000029094	GMDS (ENSLAFG00000012336) #21	MYLK4 (ENSLAFG00000014597) #23	WRNIP1 (ENSLAFG00000014603) #24	SERPINB1 (ENSLAFG00000006794) #25	SERPINB9 (ENSLAFG00000007487) #26	ENSLAFG00000011947 #27	NQO2 (ENSLAFG00000031167) #28	RIPK1 (ENSLAFG00000010059) #29	BPHL (ENSLAFG00000010064) #30	ENSLAFG00000010068 #32	ENSLAFG00000031279 #32	ENSLAFG00000027462 #32	ENSLAFG00000032203	SLC22A23 (ENSLAFG00000012205) #34
Xenarthra	ANCESTRAL SPECIES	1871															ENSGT00940000162527 #20	ENSGT00940000162303.b #22
Armadillo	MODERN SPECIES	2439															FOXF2 (ENSDNOG00000031153) #20	FOXC1 (ENSDNOG00000004961) #22