Sarcopterygii ANCESTRAL SPECIES 180 ENSGT00390000016168.b ENSGT01070000253766.B ENSGT00390000013253 ENSGT00940000159879 ENSGT00940000162011 ENSGT00940000163813 ENSGT00940000162303.b #22 ENSGT00390000009842 ENSGT01090000260003.a.b.b.a.a.b.b.a ENSGT00390000002407.c ENSGT00950000183102.A.b.a ENSGT00950000183149.B ENSGT00940000158197 ENSGT00390000006008 ENSGT00940000164879 ENSGT00940000160694 ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000156407 ENSGT00390000000732 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00940000167364 ENSGT00940000167514 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000163866.a.b ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000161205 ENSGT00940000154520 ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a ENSGT00940000158137.c.a ENSGT00520000055637.A.a Amniota ANCESTRAL SPECIES 3 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000167417 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000161205 ENSGT00940000161637 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000161560 ENSGT00940000154520 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00940000158137.c.a ENSGT00520000055637.A.a Mammalia ANCESTRAL SPECIES 3 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000167417 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000161205 ENSGT00940000161637 Theria ANCESTRAL SPECIES 7 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000167417 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 Eutheria ANCESTRAL SPECIES 30 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00940000167417 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00940000167417 ENSGT00390000011804 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154519.g.b #29 ENSGT00940000154931 #34 ENSGT00940000154519.h ##29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Glires ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Rodentia ANCESTRAL SPECIES 6 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Rodentia_B ANCESTRAL SPECIES 8 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Myomorpha ANCESTRAL SPECIES 11 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Muroidea ANCESTRAL SPECIES 15 ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00950000182818.A.f.b.a.b.b ENSGT00950000182818.A.f.b.a.b.a ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b.a #29 ENSGT00940000154519.g.b.b ##29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 Murinae ANCESTRAL SPECIES 21 ENSGT00950000182818.A.f.b.a.b.b ENSGT00950000182818.A.f.b.a.b.a ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573.k.a #27 ENSGT00940000154573.l #28 ENSGT00940000154519.g.b.a.b #29 ENSGT00940000154931.d.o.a.a #30 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154573.k.b #32 ENSGT00940000154519.g.b.b ##29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 Mus ANCESTRAL SPECIES 18 ENSGT00950000182818.A.f.b.b.b ENSGT00950000182818.A.f.b.a.b.b ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573.k.a #27 ENSGT00940000154573.k.b #32 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154519.g.b.a.b #29 ENSGT00940000154931.d.o.a.a #30 ENSGT00940000154931.d.p #33 ENSGT00940000154931.d.o.b #34 ENSGT00940000154519.g.b.a.a.a.b.a ##29 ENSGT00940000154519.g.b.a.a.b.a ##29 ENSGT00940000154519.g.b.a.a.a.a ##29 ENSGT00940000154519.g.b.b ##29 Mus_A ANCESTRAL SPECIES 14 ENSGT00950000182818.A.f.b.b.b ENSGT00950000182818.A.f.b.a.b.b ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573.k.a #27 ENSGT00940000154573.k.b #32 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154573.l #28 ENSGT00940000154519.g.b.a.b #29 ENSGT00940000154931.d.o.a.a #30 ENSGT00940000154519.g.a ##29 ENSGT00940000154519.g.b.a.a.a.a ##29 ENSGT00940000154519.g.b.b ##29 ENSGT00940000156563 ENSGT00940000159347 Mus_B ANCESTRAL SPECIES 13 ENSGT00950000182818.A.f.b.b.b ENSGT00950000182818.A.f.b.a.b.b ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573.k.a #27 ENSGT00940000154573.l #28 ENSGT00940000154519.g.b.a.b #29 ENSGT00940000154931.d.o.a.a #30 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154573.k.b #32 ENSGT00940000154931.d.p #33 ENSGT00940000154931.d.o.b.b #34 ENSGT00940000154931.d.o.b.a.a ##34 ENSGT00940000154519.g.b.a.a.a.b.a ##29 ENSGT00940000154519.g.b.a.a.b.a ##29 Mus_C ANCESTRAL SPECIES 10 ENSGT00950000182818.A.f.b.b.b ENSGT00950000182818.A.f.b.a.b.b ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573.k.a #27 ENSGT00940000154573.l #28 ENSGT00940000154519.g.b.a.b #29 ENSGT00940000154931.d.o.a.a #30 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154573.k.b #32 ENSGT00940000154931.d.p #33 ENSGT00940000154931.d.o.b.b #34 ENSGT00940000154931.d.o.b.a.b ##34 ENSGT00940000154931.d.o.b.a.a ##34 ENSGT00940000154519.g.b.a.a.a.b.a ##29 Steppe mouse MODERN SPECIES 2907 Foxq1 (ENSMSIG00000012808) #20 Foxf2 (ENSMSIG00000012814) #21 Foxc1 (ENSMSIG00000012835) #22 Gmds (ENSMSIG00000012840) #23 ENSMSIG00000012867 #24 Wrnip1 (ENSMSIG00000012927) #25 ENSMSIG00000012960 #26 Serpinb1a (ENSMSIG00000012962) #27 Serpinb1c (ENSMSIG00000012970) #28 Serpinb6b (ENSMSIG00000012982) #29 Serpinb9 (ENSMSIG00000013005) #30 Serpinb9b (ENSMSIG00000013028) #31 Serpinb1b (ENSMSIG00000013045) #32 Serpinb9c (ENSMSIG00000013069) #33 Serpinb9d (ENSMSIG00000013119) #34 spretus MODERN SPECIES 4 Prl5a1 (MGP_SPRETEiJ_G0019254) Sox4 (MGP_SPRETEiJ_G0019255) Cdkal1 (MGP_SPRETEiJ_G0019256) E2f3 (MGP_SPRETEiJ_G0019257) Mboat1 (MGP_SPRETEiJ_G0019258) Agtr1a (MGP_SPRETEiJ_G0019259) Uqcrfs1 (MGP_SPRETEiJ_G0019260) Dusp22 (MGP_SPRETEiJ_G0019261) Irf4 (MGP_SPRETEiJ_G0019262) Exoc2 (MGP_SPRETEiJ_G0019263) Hus1b (MGP_SPRETEiJ_G0019264) MGP_SPRETEiJ_G0019265 MGP_SPRETEiJ_G0019266 Foxq1 (MGP_SPRETEiJ_G0019267) #20 Foxf2 (MGP_SPRETEiJ_G0019268) #21 Foxc1 (MGP_SPRETEiJ_G0019269) #22 Gmds (MGP_SPRETEiJ_G0019270) #23 MGP_SPRETEiJ_G0019271 #24 Wrnip1 (MGP_SPRETEiJ_G0019272) #25 MGP_SPRETEiJ_G0019273 #26 MGP_SPRETEiJ_G0019274 #27 MGP_SPRETEiJ_G0019275 #28 Serpinb6b (MGP_SPRETEiJ_G0019276) #29 Serpinb9 (MGP_SPRETEiJ_G0019277) #30 MGP_SPRETEiJ_G0019278 ##34 Serpinb9c (MGP_SPRETEiJ_G0019279) #33 MGP_SPRETEiJ_G0019280 ##34 MGP_SPRETEiJ_G0019281 ##34 MGP_SPRETEiJ_G0019282 ##34 MGP_SPRETEiJ_G0019283 ##34 MGP_SPRETEiJ_G0019284 ##34 Mouse MODERN SPECIES 4 Prl2c1 (ENSMUSG00000062551) Prl4a1 (ENSMUSG00000005891) Prl5a1 (ENSMUSG00000017064) Sox4 (ENSMUSG00000076431) Cdkal1 (ENSMUSG00000006191) E2f3 (ENSMUSG00000016477) Mboat1 (ENSMUSG00000038732) Agtr1a (ENSMUSG00000049115) Uqcrfs1 (ENSMUSG00000038462) Dusp22 (ENSMUSG00000069255) Irf4 (ENSMUSG00000021356) Exoc2 (ENSMUSG00000021357) Hus1b (ENSMUSG00000076430) Foxq1 (ENSMUSG00000038415) #20 Foxf2 (ENSMUSG00000038402) #21 Foxc1 (ENSMUSG00000050295) #22 Gmds (ENSMUSG00000038372) #23 Mylk4 (ENSMUSG00000044951) #24 Wrnip1 (ENSMUSG00000021400) #25 Serpinb1a (ENSMUSG00000044734) #27 Serpinb1c (ENSMUSG00000079049) #28 Serpinb6b (ENSMUSG00000042842) #29 Serpinb9 (ENSMUSG00000045827) #30 Serpinb9b (ENSMUSG00000021403) #31 Serpinb1b (ENSMUSG00000051029) #32 Serpinb9c (ENSMUSG00000021404) #33 Serpinb9d (ENSMUSG00000054266) #34 Serpinb9e (ENSMUSG00000062342) ##34 Serpinb9f (ENSMUSG00000038327) ##34 Serpinb9h (ENSMUSG00000071452) ##34 Serpinb9g (ENSMUSG00000057726) ##34 Ryukyu mouse MODERN SPECIES 4 Prl5a1 (MGP_CAROLIEiJ_G0018385) Sox4 (MGP_CAROLIEiJ_G0018386) Cdkal1 (MGP_CAROLIEiJ_G0018387) E2f3 (MGP_CAROLIEiJ_G0018388) Mboat1 (MGP_CAROLIEiJ_G0018389) Agtr1a (MGP_CAROLIEiJ_G0018390) Uqcrfs1 (MGP_CAROLIEiJ_G0018391) Dusp22 (MGP_CAROLIEiJ_G0018392) Irf4 (MGP_CAROLIEiJ_G0018393) Exoc2 (MGP_CAROLIEiJ_G0018394) Hus1b (MGP_CAROLIEiJ_G0018395) MGP_CAROLIEiJ_G0018396 MGP_CAROLIEiJ_G0018397 Foxq1 (MGP_CAROLIEiJ_G0018398) #20 Foxf2 (MGP_CAROLIEiJ_G0018399) #21 Foxc1 (MGP_CAROLIEiJ_G0018400) #22 Gmds (MGP_CAROLIEiJ_G0018401) #23 MGP_CAROLIEiJ_G0018402 #24 Wrnip1 (MGP_CAROLIEiJ_G0018403) #25 MGP_CAROLIEiJ_G0018404 #26 Serpinb1a (MGP_CAROLIEiJ_G0018405) #27 MGP_CAROLIEiJ_G0018406 #32 Serpinb6b (MGP_CAROLIEiJ_G0018407) #29 Serpinb9 (MGP_CAROLIEiJ_G0018408) #30 MGP_CAROLIEiJ_G0018409 ##34 MGP_CAROLIEiJ_G0018410 ##34 MGP_CAROLIEiJ_G0018411 ##34 MGP_CAROLIEiJ_G0018412 ##29 Serpinb6c (MGP_CAROLIEiJ_G0018413) ##29 Serpinb6a (MGP_CAROLIEiJ_G0018414) ##29 Nqo2 (MGP_CAROLIEiJ_G0018415) Shrew mouse MODERN SPECIES 7 Prl4a1 (MGP_PahariEiJ_G0019449) Prl5a1 (MGP_PahariEiJ_G0019450) Sox4 (MGP_PahariEiJ_G0019451) Cdkal1 (MGP_PahariEiJ_G0019452) E2f3 (MGP_PahariEiJ_G0019453) Mboat1 (MGP_PahariEiJ_G0019454) Agtr1a (MGP_PahariEiJ_G0019455) Uqcrfs1 (MGP_PahariEiJ_G0019456) Dusp22 (MGP_PahariEiJ_G0019457) Irf4 (MGP_PahariEiJ_G0019458) Exoc2 (MGP_PahariEiJ_G0019459) Hus1b (MGP_PahariEiJ_G0019460) MGP_PahariEiJ_G0019461 Foxq1 (MGP_PahariEiJ_G0019462) #20 Foxf2 (MGP_PahariEiJ_G0019463) #21 Foxc1 (MGP_PahariEiJ_G0019464) #22 Gmds (MGP_PahariEiJ_G0019465) #23 MGP_PahariEiJ_G0019466 #24 Wrnip1 (MGP_PahariEiJ_G0019467) #25 MGP_PahariEiJ_G0019468 #26 Serpinb1a (MGP_PahariEiJ_G0019469) #27 MGP_PahariEiJ_G0019470 #32 Serpinb6b (MGP_PahariEiJ_G0019471) #29 Serpinb9 (MGP_PahariEiJ_G0019472) #30 Serpinb9c (MGP_PahariEiJ_G0019473) #33 MGP_PahariEiJ_G0019474 #34 MGP_PahariEiJ_G0019475 #34 MGP_PahariEiJ_G0019476 #34 MGP_PahariEiJ_G0019477 #34 Serpinb6d (MGP_PahariEiJ_G0019478) ##29 Serpinb6e (MGP_PahariEiJ_G0019479) ##29 Rat MODERN SPECIES 8 Sox4 (ENSRNOG00000065643) ENSRNOG00000065771 Cdkal1 (ENSRNOG00000018381) RGD1561310 (ENSRNOG00000062739) ENSRNOG00000062512 E2f3 (ENSRNOG00000029273) Mboat1 (ENSRNOG00000027125) Agtr1a (ENSRNOG00000018346) ENSRNOG00000070855 Uqcrfs1 (ENSRNOG00000018281) Dusp22 (ENSRNOG00000056376) Irf4 (ENSRNOG00000061070) Exoc2 (ENSRNOG00000060266) Foxq1 (ENSRNOG00000062314) #20 Foxf2 (ENSRNOG00000063796) #21 Foxc1 (ENSRNOG00000070919) #22 Gmds (ENSRNOG00000017605) #23 Mylk4 (ENSRNOG00000070083) #24 ENSRNOG00000063699 #26 Wrnip1 (ENSRNOG00000017040) #25 Serpinb1a (ENSRNOG00000016581) #27 Serpinb6b (ENSRNOG00000016420) #29 Serpinb9 (ENSRNOG00000033772) #30 RGD1562844 (ENSRNOG00000048576) #31 Serpinb1b (ENSRNOG00000034229) #32 Serpinb9d (ENSRNOG00000022139) #34 Serpinb6e (ENSRNOG00000070025) ##29 RGD1564786 (ENSRNOG00000063990) ##29 Nqo2 (ENSRNOG00000017820) Serpinb6a (ENSRNOG00000017962) ##29 Ripk1 (ENSRNOG00000017787) Cricetidae ANCESTRAL SPECIES 22 ENSGT00950000182818.A.f.b.a.b.b ENSGT00950000182818.A.f.b.a.b.a ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b.a.c.b #29 ENSGT00940000154519.g.b.a.d #29 ENSGT00940000154519.g.b.a.c.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 Cricetinae ANCESTRAL SPECIES 20 ENSGT00950000182818.A.f.b.b.b ENSGT00950000182818.A.f.b.a.b.b ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135627 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573 #32 ENSGT00940000154931.d.j #34 ENSGT00940000154519.g.b.a.c.b #29 ENSGT00940000154931.d.i #34 ENSGT00940000154519.g.b.a.c.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 Golden Hamster MODERN SPECIES 623 Prl5a1 (ENSMAUG00000018024) Sox4 (ENSMAUG00000001434) Cdkal1 (ENSMAUG00000020796) E2f3 (ENSMAUG00000019714) ENSMAUG00000018470 Mboat1 (ENSMAUG00000017913) Agtr1a (ENSMAUG00000017279) Uqcrfs1 (ENSMAUG00000016767) Dusp22 (ENSMAUG00000016397) Irf4 (ENSMAUG00000015575) Exoc2 (ENSMAUG00000015195) ENSMAUG00000014057 ENSMAUG00000013208 Foxq1 (ENSMAUG00000018519) #20 Foxf2 (ENSMAUG00000012470) #21 Foxc1 (ENSMAUG00000018460) #22 Gmds (ENSMAUG00000011976) #23 Mylk4 (ENSMAUG00000011053) #24 Wrnip1 (ENSMAUG00000009914) #25 ENSMAUG00000009659 #32 ENSMAUG00000009345 #34 ENSMAUG00000009098 #29 ENSMAUG00000008075 #34 ENSMAUG00000001439 #34 ENSMAUG00000001093 #29 Nqo2 (ENSMAUG00000000875) Ripk1 (ENSMAUG00000000557) Bphl (ENSMAUG00000000408) Tubb2a (ENSMAUG00000018540) ENSMAUG00000018054 Psmg4 (ENSMAUG00000017755) Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001000972 Prl4a1 (ENSCGRG00001018885) Prl5a1 (ENSCGRG00001023618) Sox4 (ENSCGRG00001004088) Cdkal1 (ENSCGRG00001010740) E2f3 (ENSCGRG00001024916) Mboat1 (ENSCGRG00001025065) Agtr1a (ENSCGRG00001009515) Uqcrfs1 (ENSCGRG00001008222) Dusp22 (ENSCGRG00001010384) Irf4 (ENSCGRG00001016836) Exoc2 (ENSCGRG00001019674) ENSCGRG00001013162 Foxq1 (ENSCGRG00001006043) #20 Foxf2 (ENSCGRG00001022972) #21 Foxc1 (ENSCGRG00001005886) #22 Gmds (ENSCGRG00001014163) #23 ENSCGRG00001020761 Mylk4 (ENSCGRG00001012998) #24 Wrnip1 (ENSCGRG00001020075) #25 ENSCGRG00001007544 #26 ENSCGRG00001000139 #32 ENSCGRG00001009851 ENSCGRG00001014514 #34 ENSCGRG00001021359 ENSCGRG00001022043 #34 ENSCGRG00001020665 #29 ENSCGRG00001015437 #29 Nqo2 (ENSCGRG00001004425) Ripk1 (ENSCGRG00001014419) Bphl (ENSCGRG00001014124) Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00950000182818.A.f.b.b.b ENSGT00950000182818.A.f.b.a.b.b ENSGT00950000182818.A.f.b.a.b.a ENSGT00940000161470 ENSGT00940000155952 ENSGT00940000155115.a.a ENSGT01030000234564.a.a.a.a.a ENSGT01050000244888.b.a.c.b.g ENSGT00390000001014 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT01000000215059 #26 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b.a.d #29 ENSGT00940000154519.g.b.a.c.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 Prairie vole MODERN SPECIES 3 Sox4 (ENSMOCG00000004505) ENSMOCG00000002429 Cdkal1 (ENSMOCG00000022160) E2f3 (ENSMOCG00000022923) Mboat1 (ENSMOCG00000004726) ENSMOCG00000019499 Uqcrfs1 (ENSMOCG00000014738) ENSMOCG00000007870 Irf4 (ENSMOCG00000017633) Exoc2 (ENSMOCG00000022998) Hus1b (ENSMOCG00000002316) ENSMOCG00000000826 Foxq1 (ENSMOCG00000005340) #20 Foxf2 (ENSMOCG00000010276) #21 ENSMOCG00000002929 Foxc1 (ENSMOCG00000006436) #22 Gmds (ENSMOCG00000018203) #23 Mylk4 (ENSMOCG00000014428) #24 ENSMOCG00000019965 Wrnip1 (ENSMOCG00000002819) #25 ENSMOCG00000021377 #32 ENSMOCG00000000987 #34 ENSMOCG00000016281 #29 ENSMOCG00000010614 #34 ENSMOCG00000004352 #34 ENSMOCG00000011182 #29 ENSMOCG00000019022 ENSMOCG00000016676 #29 ENSMOCG00000000484 #29 Nqo2 (ENSMOCG00000007454) Ripk1 (ENSMOCG00000002677) Northern American deer mouse MODERN SPECIES 18 Prl5a1 (ENSPEMG00000022650) ENSPEMG00000026740 Sox4 (ENSPEMG00000013688) Cdkal1 (ENSPEMG00000009808) E2f3 (ENSPEMG00000011070) Mboat1 (ENSPEMG00000028788) Agtr1a (ENSPEMG00000029887) Uqcrfs1 (ENSPEMG00000012221) Dusp22 (ENSPEMG00000012769) Irf4 (ENSPEMG00000012922) Exoc2 (ENSPEMG00000014307) Hus1b (ENSPEMG00000013275) ENSPEMG00000023016 Foxq1 (ENSPEMG00000029927) #20 Foxf2 (ENSPEMG00000017102) #21 Foxc1 (ENSPEMG00000025795) #22 Gmds (ENSPEMG00000018701) #23 ENSPEMG00000000084 #24 Wrnip1 (ENSPEMG00000000543) #25 ENSPEMG00000030799 #26 ENSPEMG00000003771 #32 ENSPEMG00000024282 #34 ENSPEMG00000007226 #29 ENSPEMG00000007216 #34 ENSPEMG00000025946 #34 ENSPEMG00000029739 #29 ENSPEMG00000011189 #34 ENSPEMG00000006842 #29 ENSPEMG00000030940 #29 Nqo2 (ENSPEMG00000022103) Ripk1 (ENSPEMG00000014892) Upper Galilee mountains blind mole rat MODERN SPECIES 960 Agtr1a (ENSNGAG00000001950) Uqcrfs1 (ENSNGAG00000001109) Dusp22 (ENSNGAG00000021364) Irf4 (ENSNGAG00000020771) ENSNGAG00000019248 ENSNGAG00000017632 Foxq1 (ENSNGAG00000011384) #20 Foxf2 (ENSNGAG00000011181) #21 ENSNGAG00000007865 #22 Gmds (ENSNGAG00000021851) #23 Mylk4 (ENSNGAG00000016589) #24 Wrnip1 (ENSNGAG00000022017) #25 ENSNGAG00000007869 #32 ENSNGAG00000020541 #34 ENSNGAG00000018961 #29 Lesser Egyptian jerboa MODERN SPECIES 129 Dusp22 (ENSJJAG00000019867) Irf4 (ENSJJAG00000019182) ENSJJAG00000017878 Foxf2 (ENSJJAG00000017530) #21 ENSJJAG00000015833 #22 Gmds (ENSJJAG00000015490) #23 ENSJJAG00000013456 #24 Wrnip1 (ENSJJAG00000011299) #25 ENSJJAG00000010900 #32 ENSJJAG00000017382 #34 ENSJJAG00000015735 #29 Nqo2 (ENSJJAG00000015012) Ripk1 (ENSJJAG00000013771) Bphl (ENSJJAG00000012949) Tubb2b (ENSJJAG00000011739) Psmg4 (ENSJJAG00000011408) Slc22a23 (ENSJJAG00000005711) Pxdc1 (ENSJJAG00000012785) Prpf4b (ENSJJAG00000011217) ENSJJAG00000010338 Kangaroo rat MODERN SPECIES 351 Dusp22 (ENSDORG00000007227) Irf4 (ENSDORG00000014895) Exoc2 (ENSDORG00000008782) Foxf2 (ENSDORG00000001552) #21 Foxc1 (ENSDORG00000006796) #22 Gmds (ENSDORG00000006797) #23 Mylk4 (ENSDORG00000000510) #24 Wrnip1 (ENSDORG00000003946) #25 ENSDORG00000003777 #32 ENSDORG00000026119 #32 ENSDORG00000027278 #34 ENSDORG00000001371 Nqo2 (ENSDORG00000010390) Ripk1 (ENSDORG00000010392) ENSDORG00000029944 ENSDORG00000011196 ENSDORG00000028660 Cdyl (ENSDORG00000002812) ENSDORG00000023689 ENSDORG00000004072 Rodentia_A ANCESTRAL SPECIES 26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154931.c.a.b ##34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Sciuridae ANCESTRAL SPECIES 1 ENSGT00940000163682 ENSGT00940000163314 ENSGT00940000163016 ENSGT00940000162298 ENSGT00940000163102 ENSGT00940000159644 ENSGT00940000163521 ENSGT00940000161576 ENSGT00940000163165 ENSGT00940000163486 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00390000012138.a.b.t.ab ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154931.c.a.b ##34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 Marmotini ANCESTRAL SPECIES 121 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.c.b ##34 Marmotini_b ANCESTRAL SPECIES 234 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.c.b ##34 Arctic ground squirrel MODERN SPECIES 204 ENSUPAG00010005126 ENSUPAG00010005065 #29 ENSUPAG00010004463 DUSP22 (ENSUPAG00010004416) IRF4 (ENSUPAG00010004398) ENSUPAG00010004391 EXOC2 (ENSUPAG00010004362) FOXQ1 (ENSUPAG00010004342) #20 FOXF2 (ENSUPAG00010004332) #21 FOXC1 (ENSUPAG00010004330) #22 GMDS (ENSUPAG00010004323) #23 MYLK4 (ENSUPAG00010004253) #24 ENSUPAG00010004244 #26 WRNIP1 (ENSUPAG00010004233) #25 SERPINB1 (ENSUPAG00010004225) #32 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005014208 ENSSVLG00005014265 ENSSVLG00005014308 ENSSVLG00005014343 ENSSVLG00005014389 ENSSVLG00005014442 ENSSVLG00005014463 IRF4 (ENSSVLG00005014508) EXOC2 (ENSSVLG00005014600) HUS1B (ENSSVLG00005014653) ENSSVLG00005014684 ENSSVLG00005014698 ENSSVLG00005014724 FOXQ1 (ENSSVLG00005014773) #20 FOXF2 (ENSSVLG00005014790) #21 FOXC1 (ENSSVLG00005014837) #22 GMDS (ENSSVLG00005014861) #23 ENSSVLG00005006132 MYLK4 (ENSSVLG00005006200) #24 ENSSVLG00005006323 #26 WRNIP1 (ENSSVLG00005006348) #25 SERPINB1 (ENSSVLG00005006417) #32 ENSSVLG00005006449 #34 ENSSVLG00005006719 #34 ENSSVLG00005007366 SERPINB6 (ENSSVLG00005007395) #29 NQO2 (ENSSVLG00005007475) RIPK1 (ENSSVLG00005007529) ENSSVLG00005007569 TUBB2A (ENSSVLG00005007615) TUBB2B (ENSSVLG00005007652) Hystricomorpha ANCESTRAL SPECIES 42 ENSGT00940000163016 ENSGT00940000162298 ENSGT00940000163102 ENSGT00940000159644.x ENSGT00940000163521 ENSGT00940000161576 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b ENSGT00940000164849 ENSGT00940000160281 ENSGT00940000153125.B ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT00940000162298 ENSGT00940000163102 ENSGT00940000159644.w ENSGT00940000163521 ENSGT00940000161576 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.b.b.b ENSGT00940000164849 ENSGT00940000160281 ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ENSGT01100000263474.a.b.b.f ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B.b ENSGT00940000155562 Hystricomorpha_b ANCESTRAL SPECIES 58 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931.d #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 ENSGT00940000154543.b Degu MODERN SPECIES 64 ENSODEG00000019469 ENSODEG00000019426 ZNF184 (ENSODEG00000008565) PRSS16 (ENSODEG00000007095) ENSODEG00000019617 ENSODEG00000019561 ENSODEG00000019618 ENSODEG00000006799 ENSODEG00000006390 ENSODEG00000007570 DUSP22 (ENSODEG00000006703) IRF4 (ENSODEG00000007674) ENSODEG00000019672 EXOC2 (ENSODEG00000006797) FOXF2 (ENSODEG00000007607) #21 FOXC1 (ENSODEG00000006912) #22 ENSODEG00000007557 GMDS (ENSODEG00000009960) #23 MYLK4 (ENSODEG00000006897) #24 WRNIP1 (ENSODEG00000006805) #25 SERPINB1 (ENSODEG00000010241) #32 ENSODEG00000006906 #34 ENSODEG00000006648 ENSODEG00000006244 #34 SERPINB6 (ENSODEG00000008291) #29 NQO2 (ENSODEG00000006400) RIPK1 (ENSODEG00000007668) BPHL (ENSODEG00000008397) TUBB2A (ENSODEG00000006689) ENSODEG00000006037 ENSODEG00000006987 Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000011763 ENSHGLG00000040689 ENSHGLG00000034563 ENSHGLG00000039066 ENSHGLG00000046877 HIST1H4I (ENSHGLG00000036883) ENSHGLG00000033476 ENSHGLG00000008379 IRF4 (ENSHGLG00000008061) EXOC2 (ENSHGLG00000008005) ENSHGLG00000044630 FOXQ1 (ENSHGLG00000007951) #20 FOXF2 (ENSHGLG00000007914) #21 FOXC1 (ENSHGLG00000040750) #22 GMDS (ENSHGLG00000014454) #23 ENSHGLG00000033368 ENSHGLG00000014288 #24 ENSHGLG00000040911 #26 WRNIP1 (ENSHGLG00000014216) #25 SERPINB1 (ENSHGLG00000032738) #32 ENSHGLG00000017487 #34 SERPINB6 (ENSHGLG00000015274) #29 ENSHGLG00000045779 RIPK1 (ENSHGLG00000008330) BPHL (ENSHGLG00000008018) ENSHGLG00000043950 TUBB2B (ENSHGLG00000007696) ENSHGLG00000007366 SLC22A23 (ENSHGLG00000007033) Lagomorpha ANCESTRAL SPECIES ENSGT00940000162303.b #22 Pika MODERN SPECIES 10366 ENSOPRG00000014675 #22 Primates ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Lemuriformes ANCESTRAL SPECIES 63 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Lemuriformes_a ANCESTRAL SPECIES 166 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Coquerels sifaka MODERN SPECIES 497 FOXF2 (ENSPCOG00000022131) #21 FOXC1 (ENSPCOG00000026920) #22 GMDS (ENSPCOG00000028639) #23 ENSPCOG00000019865 MYLK4 (ENSPCOG00000026431) #24 ENSPCOG00000020178 WRNIP1 (ENSPCOG00000017172) #25 SERPINB1 (ENSPCOG00000003266) #32 SERPINB9 (ENSPCOG00000025594) #34 SERPINB6 (ENSPCOG00000019023) #29 NQO2 (ENSPCOG00000017951) RIPK1 (ENSPCOG00000024336) BPHL (ENSPCOG00000020939) TUBB2B (ENSPCOG00000015941) ENSPCOG00000020515 PSMG4 (ENSPCOG00000014849) SLC22A23 (ENSPCOG00000007966) Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00390000006707.w.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Platyrrhini ANCESTRAL SPECIES 34 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000001231.s.a ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00390000006707.w.b ENSGT00940000159347 ENSGT00390000004746.c.a ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209.e.a ENSGT00390000009209.f Mas night monkey MODERN SPECIES 892 DUSP22 (ENSANAG00000034975) ENSANAG00000029204 IRF4 (ENSANAG00000035286) EXOC2 (ENSANAG00000022436) FOXQ1 (ENSANAG00000011580) #20 FOXF2 (ENSANAG00000029212) #21 ENSANAG00000027478 FOXC1 (ENSANAG00000026686) #22 GMDS (ENSANAG00000026640) #23 MYLK4 (ENSANAG00000022908) #24 WRNIP1 (ENSANAG00000032434) #25 SERPINB1 (ENSANAG00000019955) #32 SERPINB9 (ENSANAG00000030714) #34 SERPINB6 (ENSANAG00000033957) #29 Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00910000147563 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00910000147563 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000001231.s.a.a.b ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 Vervet Monkey MODERN SPECIES 8 DUSP22 (ENSCSAG00000007160) IRF4 (ENSCSAG00000007164) EXOC2 (ENSCSAG00000007171) ENSCSAG00000007177 FOXQ1 (ENSCSAG00000019113) #20 FOXF2 (ENSCSAG00000007180) #21 FOXC1 (ENSCSAG00000019112) #22 ENSCSAG00000007184 #23 MYLK4 (ENSCSAG00000007191) #24 WRNIP1 (ENSCSAG00000007198) #25 SERPINB1 (ENSCSAG00000007203) #32 SERPINB9 (ENSCSAG00000007207) #34 SERPINB6 (ENSCSAG00000007210) #29 NQO2 (ENSCSAG00000007218) RIPK1 (ENSCSAG00000007224) BPHL (ENSCSAG00000007243) TUBB2A (ENSCSAG00000007247) TUBB2B (ENSCSAG00000007249) PSMG4 (ENSCSAG00000007253) SLC22A23 (ENSCSAG00000007261) PXDC1 (ENSCSAG00000007263) FAM50B (ENSCSAG00000019111) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000001231.s.a.a.b ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b Macaca ANCESTRAL SPECIES 23 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000001231.s.a.a.b ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00940000154295.y.b.b ENSGT00390000009209 Macaca_a ANCESTRAL SPECIES 24 ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.a.b ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Rhesus MODERN SPECIES 14 ENSMMUG00000049765 DUSP22 (ENSMMUG00000018514) IRF4 (ENSMMUG00000018513) EXOC2 (ENSMMUG00000023558) FOXQ1 (ENSMMUG00000059043) #20 FOXF2 (ENSMMUG00000004540) #21 FOXC1 (ENSMMUG00000005778) #22 GMDS (ENSMMUG00000005779) #23 MYLK4 (ENSMMUG00000007144) #24 WRNIP1 (ENSMMUG00000007143) #25 SERPINB1 (ENSMMUG00000042368) #32 SERPINB9 (ENSMMUG00000011719) #34 SERPINB6 (ENSMMUG00000037816) #29 NQO2 (ENSMMUG00000008487) RIPK1 (ENSMMUG00000008485) BPHL (ENSMMUG00000008483) TUBB2B (ENSMMUG00000023785) PSMG4 (ENSMMUG00000011031) SLC22A23 (ENSMMUG00000001371) PXDC1 (ENSMMUG00000010926) FAM50B (ENSMMUG00000039209) PRPF4B (ENSMMUG00000014017) Pig-tailed macaque MODERN SPECIES 136 FOXC1 (ENSMNEG00000006978) #22 GMDS (ENSMNEG00000035111) #23 ENSMNEG00000036375 ENSMNEG00000035768 MYLK4 (ENSMNEG00000033807) #24 WRNIP1 (ENSMNEG00000032509) #25 SERPINB1 (ENSMNEG00000031098) #32 SERPINB9 (ENSMNEG00000018071) #34 SERPINB6 (ENSMNEG00000038077) #29 NQO2 (ENSMNEG00000039080) ENSMNEG00000030982 RIPK1 (ENSMNEG00000029731) BPHL (ENSMNEG00000034992) ENSMNEG00000030834 TUBB2B (ENSMNEG00000000042) PSMG4 (ENSMNEG00000045254) Cercopithecinae_b ANCESTRAL SPECIES 37 ENSGT00940000157153.s ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Olive baboon MODERN SPECIES 16 DUSP22 (ENSPANG00000018613) IRF4 (ENSPANG00000023389) EXOC2 (ENSPANG00000010769) FOXQ1 (ENSPANG00000037731) #20 FOXF2 (ENSPANG00000044013) #21 FOXC1 (ENSPANG00000011156) #22 GMDS (ENSPANG00000020544) #23 MYLK4 (ENSPANG00000007409) #24 WRNIP1 (ENSPANG00000044052) #25 ENSPANG00000041893 SERPINB1 (ENSPANG00000030460) #32 ENSPANG00000015755 #34 NQO2 (ENSPANG00000033064) ENSPANG00000033442 ENSPANG00000038780 RIPK1 (ENSPANG00000024400) TUBB2B (ENSPANG00000047634) PSMG4 (ENSPANG00000007366) SLC22A23 (ENSPANG00000023485) ENSPANG00000037486 FAM50B (ENSPANG00000006202) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000162303.b #22 Black snub-nosed monkey MODERN SPECIES 2010 ENSRBIG00000032039 #22 Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00910000147563 ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 Gibbon MODERN SPECIES 23 RNF170 (ENSNLEG00000012949) HOOK3 (ENSNLEG00000012953) ENSNLEG00000012979 POMK (ENSNLEG00000012982) HGSNAT (ENSNLEG00000029760) ENSNLEG00000013005 ENSNLEG00000031617 ENSNLEG00000013008 DUSP22 (ENSNLEG00000010621) IRF4 (ENSNLEG00000010631) ENSNLEG00000027330 EXOC2 (ENSNLEG00000010643) ENSNLEG00000018872 ENSNLEG00000010829 #21 ENSNLEG00000029356 ENSNLEG00000010830 #22 GMDS (ENSNLEG00000010832) #23 ENSNLEG00000035231 MYLK4 (ENSNLEG00000010906) #24 WRNIP1 (ENSNLEG00000010928) #25 SERPINB1 (ENSNLEG00000010958) #32 SERPINB9 (ENSNLEG00000031330) #34 SERPINB6 (ENSNLEG00000011022) #29 ENSNLEG00000029196 NQO2 (ENSNLEG00000011051) ENSNLEG00000011073 RIPK1 (ENSNLEG00000011075) BPHL (ENSNLEG00000028923) TUBB2A (ENSNLEG00000031860) TUBB2B (ENSNLEG00000011121) ENSNLEG00000011266 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Orangutan MODERN SPECIES 19 DUSP22 (ENSPPYG00000016160) IRF4 (ENSPPYG00000016161) EXOC2 (ENSPPYG00000016162) FOXQ1 (ENSPPYG00000016165) #20 FOXF2 (ENSPPYG00000016166) #21 FOXC1 (ENSPPYG00000016167) #22 GMDS (ENSPPYG00000016168) #23 MYLK4 (ENSPPYG00000016170) #24 WRNIP1 (ENSPPYG00000041417) #25 SERPINB1 (ENSPPYG00000016172) #32 SERPINB9 (ENSPPYG00000016173) #34 SERPINB6 (ENSPPYG00000016174) #29 NQO2 (ENSPPYG00000016176) RIPK1 (ENSPPYG00000016178) BPHL (ENSPPYG00000016179) TUBB2B (ENSPPYG00000016180) ENSPPYG00000016181 SLC22A23 (ENSPPYG00000016182) PXDC1 (ENSPPYG00000041429) FAM50B (ENSPPYG00000016184) PRPF4B (ENSPPYG00000016187) Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Gorilla MODERN SPECIES 19 DUSP22 (ENSGGOG00000004744) IRF4 (ENSGGOG00000012342) EXOC2 (ENSGGOG00000005415) HUS1B (ENSGGOG00000007415) ENSGGOG00000038740 #20 FOXF2 (ENSGGOG00000013479) #21 ENSGGOG00000022142 ENSGGOG00000009269 #22 GMDS (ENSGGOG00000005663) #23 MYLK4 (ENSGGOG00000004856) #24 WRNIP1 (ENSGGOG00000022046) #25 SERPINB1 (ENSGGOG00000007770) #32 SERPINB9 (ENSGGOG00000038562) #34 SERPINB6 (ENSGGOG00000016546) #29 NQO2 (ENSGGOG00000011077) RIPK1 (ENSGGOG00000012589) BPHL (ENSGGOG00000012596) ENSGGOG00000041508 TUBB2B (ENSGGOG00000002310) ENSGGOG00000012606 SLC22A23 (ENSGGOG00000012609) PXDC1 (ENSGGOG00000000462) ENSGGOG00000044208 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Human MODERN SPECIES 18 DUSP22 (ENSG00000112679) IRF4 (ENSG00000137265) EXOC2 (ENSG00000112685) HUS1B (ENSG00000188996) FOXQ1 (ENSG00000164379) #20 FOXF2 (ENSG00000137273) #21 FOXC1 (ENSG00000054598) #22 GMDS (ENSG00000112699) #23 MYLK4 (ENSG00000145949) #24 WRNIP1 (ENSG00000124535) #25 SERPINB1 (ENSG00000021355) #32 SERPINB9 (ENSG00000170542) #34 SERPINB6 (ENSG00000124570) #29 NQO2 (ENSG00000124588) RIPK1 (ENSG00000137275) BPHL (ENSG00000137274) TUBB2A (ENSG00000137267) TUBB2B (ENSG00000137285) PSMG4 (ENSG00000180822) SLC22A23 (ENSG00000137266) PXDC1 (ENSG00000168994) FAM50B (ENSG00000145945) Pan ANCESTRAL SPECIES 29 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.g.b #29 ENSGT00940000156563 ENSGT00390000006707.w.b.c.a.a ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Chimpanzee MODERN SPECIES 19 DUSP22 (ENSPTRG00000017654) IRF4 (ENSPTRG00000017656) EXOC2 (ENSPTRG00000017657) FOXQ1 (ENSPTRG00000029883) #20 FOXF2 (ENSPTRG00000017662) #21 ENSPTRG00000046603 FOXC1 (ENSPTRG00000051406) #22 GMDS (ENSPTRG00000017663) #23 ENSPTRG00000047752 MYLK4 (ENSPTRG00000017665) #24 WRNIP1 (ENSPTRG00000017666) #25 SERPINB1 (ENSPTRG00000017667) #32 SERPINB9 (ENSPTRG00000017668) #34 SERPINB6 (ENSPTRG00000017669) #29 NQO2 (ENSPTRG00000017670) ENSPTRG00000048006 RIPK1 (ENSPTRG00000017672) BPHL (ENSPTRG00000017673) ENSPTRG00000044345 ENSPTRG00000048005 ENSPTRG00000050739 PSMG4 (ENSPTRG00000033938) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162104 ENSGT00390000000706 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.wb.b ENSGT00940000175246 ENSGT00940000154150.xb ENSGT00940000167417 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.wb.b ENSGT00940000175246 ENSGT00940000154150.xb ENSGT00940000167417.a Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 Carnivora ANCESTRAL SPECIES 4 ENSGT00530000064035.a ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329 ENSGT00940000161804 ENSGT00940000158047 ENSGT00940000166358 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 ENSGT00940000157354 Felidae ANCESTRAL SPECIES 5 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329 ENSGT00940000161804 ENSGT00940000158047 ENSGT00390000003020 ENSGT00940000154126.h ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00550000074840.z ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00390000009819.a.b.a.a.b.b.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 Cat MODERN SPECIES 236 CB2H6orf136 (ENSFCAG00000007692) ATAT1 (ENSFCAG00000007689) MRPS18B (ENSFCAG00000007686) PPP1R10 (ENSFCAG00000007682) ABCF1 (ENSFCAG00000007680) PRR3 (ENSFCAG00000025918) GNL1 (ENSFCAG00000007676) RPP21 (ENSFCAG00000034409) TRIM39 (ENSFCAG00000002034) ENSFCAG00000045054 DUSP22 (ENSFCAG00000037118) IRF4 (ENSFCAG00000022941) EXOC2 (ENSFCAG00000018670) FOXQ1 (ENSFCAG00000036417) #20 FOXF2 (ENSFCAG00000005901) #21 FOXC1 (ENSFCAG00000043380) #22 GMDS (ENSFCAG00000004783) #23 MYLK4 (ENSFCAG00000034770) #24 ENSFCAG00000034906 ENSFCAG00000053862 #26 WRNIP1 (ENSFCAG00000042833) #25 SERPINB1 (ENSFCAG00000008689) #32 SERPINB9 (ENSFCAG00000000807) #34 SERPINB6 (ENSFCAG00000000810) #29 NQO2 (ENSFCAG00000024592) ENSFCAG00000026193 RIPK1 (ENSFCAG00000014625) BPHL (ENSFCAG00000046730) TUBB2B (ENSFCAG00000014626) PSMG4 (ENSFCAG00000046735) SLC22A23 (ENSFCAG00000025838) Panthera ANCESTRAL SPECIES 30 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329 ENSGT00940000161804.e ENSGT00940000158047 ENSGT00390000003020 ENSGT00940000154126.h ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00550000074840.z ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00390000009819.a.b.a.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 Panthera_a ANCESTRAL SPECIES 32 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329 ENSGT00940000161804.e ENSGT00940000158047 ENSGT00390000003020 ENSGT00940000154126.h ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00550000074840.z ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00390000009819.a.b.a.b ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00940000167417.a ENSGT00390000011804 lion MODERN SPECIES 28 DUSP22 (ENSPLOG00000017225) IRF4 (ENSPLOG00000017300) EXOC2 (ENSPLOG00000017341) ENSPLOG00000017393 FOXQ1 (ENSPLOG00000017508) #20 FOXF2 (ENSPLOG00000017522) #21 ENSPLOG00000017561 #22 GMDS (ENSPLOG00000017599) #23 MYLK4 (ENSPLOG00000017722) #24 ENSPLOG00000017887 ENSPLOG00000017919 #26 WRNIP1 (ENSPLOG00000017949) #25 SERPINB1 (ENSPLOG00000018010) #32 SERPINB9 (ENSPLOG00000018094) #34 NQO2 (ENSPLOG00000018239) ENSPLOG00000018333 RIPK1 (ENSPLOG00000018363) BPHL (ENSPLOG00000018383) ENSPLOG00000018446 TUBB2B (ENSPLOG00000018497) ENSPLOG00000018533 SLC22A23 (ENSPLOG00000018579) leopard MODERN SPECIES 79 ATAT1 (ENSPPRG00000003362) MRPS18B (ENSPPRG00000003538) PPP1R10 (ENSPPRG00000004557) ABCF1 (ENSPPRG00000006388) ENSPPRG00000006562 GNL1 (ENSPPRG00000007039) RPP21 (ENSPPRG00000007503) TRIM39 (ENSPPRG00000007764) ENSPPRG00000007888 ENSPPRG00000008066 DUSP22 (ENSPPRG00000008570) IRF4 (ENSPPRG00000009257) EXOC2 (ENSPPRG00000010340) FOXQ1 (ENSPPRG00000014349) #20 FOXF2 (ENSPPRG00000011053) #21 FOXC1 (ENSPPRG00000014362) #22 GMDS (ENSPPRG00000011992) #23 MYLK4 (ENSPPRG00000014341) #24 ENSPPRG00000015212 WRNIP1 (ENSPPRG00000018070) #25 SERPINB1 (ENSPPRG00000019499) #32 SERPINB9 (ENSPPRG00000020115) #34 ENSPPRG00000024624 #29 NQO2 (ENSPPRG00000024196) ENSPPRG00000024159 RIPK1 (ENSPPRG00000024036) BPHL (ENSPPRG00000023975) TUBB2A (ENSPPRG00000023932) TUBB2B (ENSPPRG00000023755) ENSPPRG00000023661 PSMG4 (ENSPPRG00000022994) Caniformia ANCESTRAL SPECIES 3 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329 ENSGT00940000161804 ENSGT00940000158047 ENSGT00940000166358 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Caniformia_b ANCESTRAL SPECIES 31 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329 ENSGT00940000161804 ENSGT00940000158047 ENSGT00940000166358 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Mustelinae ANCESTRAL SPECIES 42 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B American mink MODERN SPECIES 158 DUS22 (ENSNVIG00000011177) IRF4 (ENSNVIG00000011208) ENSNVIG00000011228 EXOC2 (ENSNVIG00000011250) ENSNVIG00000011347 ENSNVIG00000011350 #20 FOXF2 (ENSNVIG00000011356) #21 FOXC1 (ENSNVIG00000011358) #22 GMDS (ENSNVIG00000011372) #23 MYLK4 (ENSNVIG00000011396) #24 WRNIP1 (ENSNVIG00000011416) #25 ILEU (ENSNVIG00000011445) #32 SERPINB9 (ENSNVIG00000011466) #34 ENSNVIG00000011489 #29 NQO2 (ENSNVIG00000011533) RIPK1 (ENSNVIG00000011579) BPHL (ENSNVIG00000011595) TUBB2B (ENSNVIG00000011631) PSMG4 (ENSNVIG00000011643) SLC22A23 (ENSNVIG00000011656) PXDC1 (ENSNVIG00000011694) ENSNVIG00000011710 FAM50B (ENSNVIG00000011720) Ferret MODERN SPECIES 202 ENSMPUG00000000390 FOXQ1 (ENSMPUG00000018966) #20 FOXF2 (ENSMPUG00000000392) #21 FOXC1 (ENSMPUG00000018449) #22 GMDS (ENSMPUG00000000399) #23 ENSMPUG00000018450 MYLK4 (ENSMPUG00000000408) #24 WRNIP1 (ENSMPUG00000000417) #25 SERPINB1 (ENSMPUG00000000421) #32 SERPINB9 (ENSMPUG00000000446) #34 ENSMPUG00000000447 ENSMPUG00000000448 #29 NQO2 (ENSMPUG00000000451) RIPK1 (ENSMPUG00000000454) BPHL (ENSMPUG00000000459) TUBB2B (ENSMPUG00000000462) SLC22A23 (ENSMPUG00000000466) PXDC1 (ENSMPUG00000000491) FAM50B (ENSMPUG00000000493) Ursidae ANCESTRAL SPECIES 39 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329.h ENSGT00940000161804 ENSGT00940000158047 ENSGT00940000166358 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT01000000215059 #26 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B Giant Panda MODERN SPECIES 15 PRR3 (ENSAMEG00000028054) GNL1 (ENSAMEG00000013421) ENSAMEG00000013405 ENSAMEG00000013448 ENSAMEG00000030310 ENSAMEG00000005967 ENSAMEG00000005976 ENSAMEG00000019338 ENSAMEG00000005656 ENSAMEG00000007436 ENSAMEG00000007495 ENSAMEG00000027994 #20 FOXF2 (ENSAMEG00000029771) #21 ENSAMEG00000025252 ENSAMEG00000025085 ENSAMEG00000010931 #22 GMDS (ENSAMEG00000010935) #23 MYLK4 (ENSAMEG00000010940) #24 ENSAMEG00000025653 #26 WRNIP1 (ENSAMEG00000027067) #25 SERPINB1 (ENSAMEG00000003580) #32 SERPINB9 (ENSAMEG00000003574) #34 ENSAMEG00000003548 #29 NQO2 (ENSAMEG00000014373) RIPK1 (ENSAMEG00000014389) BPHL (ENSAMEG00000014392) ENSAMEG00000014416 ENSAMEG00000023499 ENSAMEG00000030040 ENSAMEG00000014430 ENSAMEG00000014434 Ursus ANCESTRAL SPECIES 34 ENSGT00940000158480 ENSGT00390000008658 ENSGT00390000008276 ENSGT00390000010554 ENSGT00940000159263 ENSGT00940000158329.h ENSGT00940000161804 ENSGT00940000158047 ENSGT00940000166358 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00860000135685 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.b #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Polar bear MODERN SPECIES 181 MDC1 (ENSUMAG00000019676) NRM (ENSUMAG00000019672) DHX16 (ENSUMAG00000019661) C6orf136 (ENSUMAG00000019659) MRPS18B (ENSUMAG00000019652) PPP1R10 (ENSUMAG00000019567) ABCF1 (ENSUMAG00000019024) PRR3 (ENSUMAG00000018945) GNL1 (ENSUMAG00000018935) ENSUMAG00000018932 DUSP22 (ENSUMAG00000018924) IRF4 (ENSUMAG00000018906) ENSUMAG00000018902 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018847 ENSUMAG00000018836 #22 GMDS (ENSUMAG00000018823) #23 MYLK4 (ENSUMAG00000018791) #24 WRNIP1 (ENSUMAG00000018782) #25 SERPINB1 (ENSUMAG00000018779) #32 SERPINB9 (ENSUMAG00000018772) #34 ENSUMAG00000018764 #29 NQO2 (ENSUMAG00000018754) RIPK1 (ENSUMAG00000018746) BPHL (ENSUMAG00000018741) ENSUMAG00000018737 ENSUMAG00000018735 ENSUMAG00000018733 PSMG4 (ENSUMAG00000018729) SLC22A23 (ENSUMAG00000018716) PXDC1 (ENSUMAG00000018711) American black bear MODERN SPECIES 768 ENSUAMG00000027969 FOXQ1 (ENSUAMG00000027970) #20 FOXF2 (ENSUAMG00000027971) #21 ENSUAMG00000027972 #22 Canidae ANCESTRAL SPECIES 48 ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 ENSGT00940000154543.b Red fox MODERN SPECIES 173 ENSVVUG00000019165 ENSVVUG00000019160 ENSVVUG00000019147 ENSVVUG00000019144 ENSVVUG00000019136 #22 GMDS (ENSVVUG00000019130) #23 RPLP2 (ENSVVUG00000019125) MYLK4 (ENSVVUG00000019119) #24 WRNIP1 (ENSVVUG00000019115) #25 SERPINB1 (ENSVVUG00000019110) #32 SERPINB9 (ENSVVUG00000019101) #34 ENSVVUG00000019088 #29 NQO2 (ENSVVUG00000019083) RIPK1 (ENSVVUG00000019070) ENSVVUG00000019068 ENSVVUG00000019060 ENSVVUG00000019059 TUBB2B (ENSVVUG00000019054) SLC22A23 (ENSVVUG00000019044) PXDC1 (ENSVVUG00000019041) Canis_lupus ANCESTRAL SPECIES 36 ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00970000193590.b.c.b ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT01020000230346.C.e.c.b ENSGT00390000003582.q.a.b.a.b.a.b Dingo MODERN SPECIES 411 ENSCAFG00020000763 SPIDR (ENSCAFG00020000749) ENSCAFG00020000730 DUSP22 (ENSCAFG00020000724) IRF4 (ENSCAFG00020000645) ENSCAFG00020000635 EXOC2 (ENSCAFG00020000618) ENSCAFG00020000606 FOXF2 (ENSCAFG00020000598) #21 ENSCAFG00020000590 ENSCAFG00020000579 ENSCAFG00020000565 #22 GMDS (ENSCAFG00020000552) #23 MYLK4 (ENSCAFG00020000493) #24 WRNIP1 (ENSCAFG00020000482) #25 SERPINB1 (ENSCAFG00020000473) #32 SERPINB9 (ENSCAFG00020000463) #34 ENSCAFG00020000462 #29 NQO2 (ENSCAFG00020000450) ENSCAFG00020000437 RIPK1 (ENSCAFG00020000428) BPHL (ENSCAFG00020000419) TUBB2B (ENSCAFG00020000389) ENSCAFG00020000376 SLC22A23 (ENSCAFG00020000148) ENSCAFG00020000138 ENSCAFG00020000131 Dog MODERN SPECIES 28 ENSCAFG00845015648 ENSCAFG00845015680 DUSP22 (ENSCAFG00845015804) ENSCAFG00845015866 IRF4 (ENSCAFG00845015916) EXOC2 (ENSCAFG00845016018) ENSCAFG00845016145 FOXF2 (ENSCAFG00845016185) #21 ENSCAFG00845016251 ENSCAFG00845016281 ENSCAFG00845016313 #22 ENSCAFG00845016489 #23 MYLK4 (ENSCAFG00845016887) #24 WRNIP1 (ENSCAFG00845016996) #25 SERPINB1 (ENSCAFG00845017116) #32 SERPINB9 (ENSCAFG00845017203) #34 SERPINB6 (ENSCAFG00845017287) #29 ENSCAFG00845017319 NQO2 (ENSCAFG00845017337) RIPK1 (ENSCAFG00845017400) ENSCAFG00845017474 BPHL (ENSCAFG00845017516) TUBB2B (ENSCAFG00845017639) PSMG4 (ENSCAFG00845017809) SLC22A23 (ENSCAFG00845017898) ENSCAFG00845018193 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Chiroptera ANCESTRAL SPECIES ENSGT00940000162303.b #22 Microchiroptera ANCESTRAL SPECIES ENSGT00940000162303.b #22 Greater horseshoe bat MODERN SPECIES 27 ENSRFEG00010002141 DUSP22 (ENSRFEG00010002106) IRF4 (ENSRFEG00010002076) EXOC2 (ENSRFEG00010002038) ENSRFEG00010002006 ENSRFEG00010001997 ENSRFEG00010001986 FOXQ1 (ENSRFEG00010001977) #20 FOXF2 (ENSRFEG00010001962) #21 ENSRFEG00010001950 ENSRFEG00010001928 #22 NACA2 (ENSRFEG00010001919) GMDS (ENSRFEG00010001869) #23 MYLK4 (ENSRFEG00010001828) #24 WRNIP1 (ENSRFEG00010001786) #25 ENSRFEG00010001768 SERPINB1 (ENSRFEG00010001747) #32 ENSRFEG00010001710 #29 ENSRFEG00010001648 #34 ENSRFEG00010001556 #34 NQO2 (ENSRFEG00010001518) ENSRFEG00010001506 RIPK1 (ENSRFEG00010001467) BPHL (ENSRFEG00010001423) TUBB2B (ENSRFEG00010001382) PSMG4 (ENSRFEG00010001338) Equus ANCESTRAL SPECIES 47 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Donkey MODERN SPECIES 27 ENSEASG00005001213 ENSEASG00005001206 NDUFV2 (ENSEASG00005001191) ENSEASG00005035592 ENSEASG00005002944 PTPRM (ENSEASG00005020034) LRRC30 (ENSEASG00005038624) LAMA1 (ENSEASG00005019622) ENSEASG00005019429 ENSEASG00005019406 ENSEASG00005027632 ENSEASG00005012235 IRF4 (ENSEASG00005012225) EXOC2 (ENSEASG00005012215) FOXF2 (ENSEASG00005012206) #21 ENSEASG00005031584 #22 GMDS (ENSEASG00005012197) #23 MYLK4 (ENSEASG00005012193) #24 WRNIP1 (ENSEASG00005012190) #25 SERPINB1 (ENSEASG00005012189) #32 SERPINB9 (ENSEASG00005012183) #34 ENSEASG00005012179 #29 NQO2 (ENSEASG00005012177) RIPK1 (ENSEASG00005012175) BPHL (ENSEASG00005012172) TUBB2A (ENSEASG00005030900) ENSEASG00005012165 TUBB2B (ENSEASG00005032707) PSMG4 (ENSEASG00005012153) SLC22A23 (ENSEASG00005012146) ENSEASG00005012139 Horse MODERN SPECIES 12 DUSP22 (ENSECAG00000014558) IRF4 (ENSECAG00000016808) EXOC2 (ENSECAG00000000078) ENSECAG00000046100 FOXQ1 (ENSECAG00000034522) #20 FOXC1 (ENSECAG00000029381) #22 GMDS (ENSECAG00000001999) #23 ENSECAG00000060133 MYLK4 (ENSECAG00000006224) #24 WRNIP1 (ENSECAG00000008348) #25 SERPINB1 (ENSECAG00000009896) #32 SERPINB9 (ENSECAG00000012506) #34 SERPINB6 (ENSECAG00000015966) #29 NQO2 (ENSECAG00000008386) RIPK1 (ENSECAG00000010293) BPHL (ENSECAG00000013049) TUBB (ENSECAG00000020234) TUBB2B (ENSECAG00000058458) ENSECAG00000013813 SLC22A23 (ENSECAG00000013821) PXDC1 (ENSECAG00000014479) Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00940000154150.xb.s.b ENSGT00940000167417.a ENSGT00940000154150.xb.s.a Suina ANCESTRAL SPECIES 8 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00940000154150.xb.s.b ENSGT00940000167417.a.b ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Chacoan peccary MODERN SPECIES 779 PXDN (ENSCWAG00000009216) TPO (ENSCWAG00000008328) TMEM18 (ENSCWAG00000008176) ENSCWAG00000008061 ACP1 (ENSCWAG00000007939) SH3YL1 (ENSCWAG00000007682) FAM110C (ENSCWAG00000007650) DUSP22 (ENSCWAG00000007618) IRF4 (ENSCWAG00000007584) EXOC2 (ENSCWAG00000007537) FOXQ1 (ENSCWAG00000007521) #20 FOXF2 (ENSCWAG00000007491) #21 FOXC1 (ENSCWAG00000007480) #22 Pig MODERN SPECIES 15 DUSP22 (ENSSSCG00000031489) IRF4 (ENSSSCG00000033381) EXOC2 (ENSSSCG00000000985) ENSSSCG00000041494 ENSSSCG00000059227 FOXQ1 (ENSSSCG00000000991) #20 FOXF2 (ENSSSCG00000037195) #21 GMDS (ENSSSCG00000000994) #23 FOXC1 (ENSSSCG00000039756) #22 ENSSSCG00000028777 #24 WRNIP1 (ENSSSCG00000001010) #25 SERPINB1 (ENSSSCG00000001011) #32 SERPINB9 (ENSSSCG00000031615) #34 ENSSSCG00000038404 #29 NQO2 (ENSSSCG00000020758) RIPK1 (ENSSSCG00000001009) BPHL (ENSSSCG00000001008) TUBB2A (ENSSSCG00000062050) TUBB2B (ENSSSCG00000033655) ENSSSCG00000036988 SLC22A23 (ENSSSCG00000001004) PXDC1 (ENSSSCG00000025582) FAM50B (ENSSSCG00000026323) PRPF4B (ENSSSCG00000001002) Artiodactyla_a ANCESTRAL SPECIES 27 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00910000147105 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.s.a ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519 #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.s.a ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Pecora ANCESTRAL SPECIES 32 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.e #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.s.a ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 Percora_a ANCESTRAL SPECIES 12 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.f.a.b.a #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.s.a ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 Siberian musk deer MODERN SPECIES 96 DUSP22 (ENSMMSG00000002139) IRF4 (ENSMMSG00000001999) EXOC2 (ENSMMSG00000001872) FOXQ1 (ENSMMSG00000001830) #20 FOXF2 (ENSMMSG00000001814) #21 FOXC1 (ENSMMSG00000001806) #22 GMDS (ENSMMSG00000001775) #23 MYLK4 (ENSMMSG00000001649) #24 WRNIP1 (ENSMMSG00000001591) #25 SERPINB1 (ENSMMSG00000001564) #32 SERPINB9 (ENSMMSG00000001536) #34 ENSMMSG00000001505 #29 ENSMMSG00000001478 #29 ENSMMSG00000001460 #29 ENSMMSG00000001423 #29 ENSMMSG00000000678 #29 ENSMMSG00000000568 #29 NQO2 (ENSMMSG00000000521) RIPK1 (ENSMMSG00000000490) BPHL (ENSMMSG00000000460) TUBB2B (ENSMMSG00000000409) Bovidae ANCESTRAL SPECIES 13 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.f.a.b.a #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.s.a ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 Bovinae ANCESTRAL SPECIES 9 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.e.a #29 ENSGT00940000154519.e.b.b.a #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 American bison MODERN SPECIES 3235 ENSBBBG00000008241 ENSBBBG00000006637 IRF4 (ENSBBBG00000025076) EXOC2 (ENSBBBG00000025059) ENSBBBG00000006603 #22 GMDS (ENSBBBG00000024989) #23 MYLK4 (ENSBBBG00000024933) #24 ENSBBBG00000024867 #25 SERPINB1 (ENSBBBG00000007815) #32 SERPINB9 (ENSBBBG00000006536) #34 ENSBBBG00000024820 #29 Bos ANCESTRAL SPECIES 37 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.e.a.a #29 ENSGT00940000154519.e.b.b.a.c #29 ENSGT00940000154519.e.b.b.b.a #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 Bos_b ANCESTRAL SPECIES 8 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT01070000257212 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.e.a.b #29 ENSGT00940000154519.e.a.a #29 ENSGT00940000154519.e.b.b.a.c #29 ENSGT00940000154519.e.b.b.b.a #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 Cow MODERN SPECIES 15 DUSP22 (ENSBTAG00000027375) IRF4 (ENSBTAG00000002929) EXOC2 (ENSBTAG00000020215) ENSBTAG00000051218 FOXQ1 (ENSBTAG00000052132) #20 FOXF2 (ENSBTAG00000026896) #21 ENSBTAG00000050875 #22 GMDS (ENSBTAG00000012058) #23 MYLK4 (ENSBTAG00000012079) #24 WRNIP1 (ENSBTAG00000006166) #25 SERPINB1 (ENSBTAG00000011975) #32 SERPINB9 (ENSBTAG00000031267) #34 ENSBTAG00000053511 #29 SERPINB6 (ENSBTAG00000050155) #29 ENSBTAG00000054098 #29 ENSBTAG00000053741 #29 ENSBTAG00000049906 #29 NQO2 (ENSBTAG00000000786) ENSBTAG00000051842 RIPK1 (ENSBTAG00000006378) BPHL (ENSBTAG00000006379) TUBB2A (ENSBTAG00000048485) Bos_a ANCESTRAL SPECIES 49 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.e.a.a #29 ENSGT00940000154519.e.b.b.a.c #29 ENSGT00940000154519.e.b.b.b.a #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00940000154150.xb.s.b ENSGT00390000011804 Domestic yak MODERN SPECIES 16 ENSBGRG00000012625 IRF4 (ENSBGRG00000012510) EXOC2 (ENSBGRG00000011992) ENSBGRG00000011911 ENSBGRG00000011879 #20 FOXF2 (ENSBGRG00000011788) #21 FOXC1 (ENSBGRG00000011734) #22 GMDS (ENSBGRG00000011025) #23 MYLK4 (ENSBGRG00000010518) #24 WRNIP1 (ENSBGRG00000010299) #25 SERPINB1 (ENSBGRG00000010205) #32 SERPINB9 (ENSBGRG00000010171) #34 ENSBGRG00000010125 #29 ENSBGRG00000009409 #29 ENSBGRG00000009283 #29 ENSBGRG00000009235 #29 NQO2 (ENSBGRG00000009131) RIPK1 (ENSBGRG00000009042) BPHL (ENSBGRG00000008956) TUBB2A (ENSBGRG00000008862) ENSBGRG00000008779 SLC22A23 (ENSBGRG00000008663) Caprinae ANCESTRAL SPECIES 41 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154519.f.a.b.a #29 ENSGT00940000154519.f.a.a.a.a.a #29 ENSGT00940000154931 #34 ENSGT00940000154519.f.a.a.a.b #29 ENSGT00940000154519.e.b.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000175246 ENSGT00940000154150.xb.t ENSGT00390000011804 Rambouillet Sheep MODERN SPECIES 12 DUSP22 (ENSOARG00020010129) IRF4 (ENSOARG00020010003) EXOC2 (ENSOARG00020009424) FOXF2 (ENSOARG00020009297) #21 ENSOARG00020009253 #22 GMDS (ENSOARG00020009159) #23 ENSOARG00020009120 ENSOARG00020008839 #24 WRNIP1 (ENSOARG00020008718) #25 SERPINB1 (ENSOARG00020008679) #32 ENSOARG00020008634 #29 SERPINB9 (ENSOARG00020008599) #34 ENSOARG00020008440 #29 ENSOARG00020008345 #29 ENSOARG00020008292 ENSOARG00020007031 #29 ENSOARG00020006863 #29 ENSOARG00020006784 RIPK1 (ENSOARG00020006711) RIPK1 (ENSOARG00020006661) Goat MODERN SPECIES 15 DUSP22 (ENSCHIG00000013023) IRF4 (ENSCHIG00000017135) EXOC2 (ENSCHIG00000013305) FOXQ1 (ENSCHIG00000002934) #20 FOXF2 (ENSCHIG00000020355) #21 FOXC1 (ENSCHIG00000007582) #22 GMDS (ENSCHIG00000017697) #23 MYLK4 (ENSCHIG00000008115) #24 WRNIP1 (ENSCHIG00000014698) #25 SERPINB1 (ENSCHIG00000018405) #32 SERPINB9 (ENSCHIG00000016184) #34 ENSCHIG00000026893 #29 ENSCHIG00000014629 #29 LY86 (ENSCHIG00000000721) RREB1 (ENSCHIG00000008467) ENSCHIG00000012601 SSR1 (ENSCHIG00000021769) CAGE1 (ENSCHIG00000021103) RIOK1 (ENSCHIG00000001534) DSP (ENSCHIG00000013613) SNRNP48 (ENSCHIG00000015216) Cetacea ANCESTRAL SPECIES 7 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT01000000221719 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.c #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 Blue whale MODERN SPECIES 2 ENSBMSG00010006898 IRF4 (ENSBMSG00010006934) EXOC2 (ENSBMSG00010006978) FOXQ1 (ENSBMSG00010007017) #20 FOXF2 (ENSBMSG00010007027) #21 FOXC1 (ENSBMSG00010007030) #22 GMDS (ENSBMSG00010007043) #23 ENSBMSG00010007069 MYLK4 (ENSBMSG00010007088) #24 WRNIP1 (ENSBMSG00010007123) #25 SERPINB1 (ENSBMSG00010007136) #32 SERPINB9 (ENSBMSG00010007151) #34 ENSBMSG00010007165 #29 NQO2 (ENSBMSG00010007187) RIPK1 (ENSBMSG00010007199) BPHL (ENSBMSG00010007209) TUBB2A (ENSBMSG00010007239) PSMG4 (ENSBMSG00010007269) SLC22A23 (ENSBMSG00010007297) PXDC1 (ENSBMSG00010007412) PRPF4B (ENSBMSG00010007428) Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT01000000221719 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.c #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 Sperm whale MODERN SPECIES 9 DUSP22 (ENSPCTG00005010689) IRF4 (ENSPCTG00005010577) EXOC2 (ENSPCTG00005010489) FOXF2 (ENSPCTG00005010432) #21 ENSPCTG00005010376 #22 GMDS (ENSPCTG00005010205) #23 ENSPCTG00005010105 MYLK4 (ENSPCTG00005009809) #24 WRNIP1 (ENSPCTG00005009615) #25 ENSPCTG00005009581 #32 SERPINB9 (ENSPCTG00005009506) #34 ENSPCTG00005009401 #29 NQO2 (ENSPCTG00005009321) RIPK1 (ENSPCTG00005009207) BPHL (ENSPCTG00005009057) TUBB2A (ENSPCTG00005009021) TUBB2A (ENSPCTG00005008977) PXDC1 (ENSPCTG00005008936) PRPF4B (ENSPCTG00005008801) FAM217A (ENSPCTG00005008731) Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT01000000221719 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573.u #32 ENSGT00940000154519.c #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 ENSGT00940000154543.b Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT01000000221719 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573.u #32 ENSGT00940000154519.c #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 ENSGT00940000154543.b Vaquita MODERN SPECIES 2 DUSP22 (ENSPSNG00000016848) IRF4 (ENSPSNG00000016722) EXOC2 (ENSPSNG00000016671) FOXQ1 (ENSPSNG00000016632) #20 FOXF2 (ENSPSNG00000016588) #21 ENSPSNG00000016521 #22 GMDS (ENSPSNG00000016429) #23 ENSPSNG00000016357 MYLK4 (ENSPSNG00000016111) #24 WRNIP1 (ENSPSNG00000016040) #25 SERPINB1 (ENSPSNG00000015980) #32 ENSPSNG00000015836 #29 NQO2 (ENSPSNG00000015747) RIPK1 (ENSPSNG00000015681) BPHL (ENSPSNG00000015565) TUBB2A (ENSPSNG00000015438) PSMG4 (ENSPSNG00000015357) SLC22A23 (ENSPSNG00000015233) PXDC1 (ENSPSNG00000015171) PRPF4B (ENSPSNG00000015086) FAM217A (ENSPSNG00000014949) Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT01000000221719 ENSGT00940000156211.b #24 ENSGT01010000230145 ENSGT00390000008538 #25 ENSGT00940000154519.c #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150.xb.t ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00940000155562 ENSGT00940000155105 Beluga whale MODERN SPECIES 10 ENSDLEG00000000776 ENSDLEG00000000793 IRF4 (ENSDLEG00000000806) EXOC2 (ENSDLEG00000000911) ENSDLEG00000001130 FOXF2 (ENSDLEG00000001139) #21 FOXC1 (ENSDLEG00000001148) #22 GMDS (ENSDLEG00000001155) #23 ENSDLEG00000001169 ENSDLEG00000001175 WRNIP1 (ENSDLEG00000001184) #25 ENSDLEG00000001211 #29 NQO2 (ENSDLEG00000001236) RIPK1 (ENSDLEG00000001254) BPHL (ENSDLEG00000001285) TUBB2A (ENSDLEG00000001358) PSMG4 (ENSDLEG00000001383) SLC22A23 (ENSDLEG00000001395) ENSDLEG00000001426 PRPF4B (ENSDLEG00000001431) ECI2 (ENSDLEG00000001462) ENSDLEG00000001490 Narwhal MODERN SPECIES 310 MTCP1 (ENSMMNG00015013799) BRCC3 (ENSMMNG00015013819) ENSMMNG00015013846 VBP1 (ENSMMNG00015013861) RAB39B (ENSMMNG00015013876) CLIC2 (ENSMMNG00015013884) ENSMMNG00015013897 TMLHE (ENSMMNG00015013910) ENSMMNG00015013925 SPRY3 (ENSMMNG00015013931) VAMP7 (ENSMMNG00015013948) DUSP22 (ENSMMNG00015013987) IRF4 (ENSMMNG00015014004) EXOC2 (ENSMMNG00015014030) FOXF2 (ENSMMNG00015014085) #21 FOXC1 (ENSMMNG00015014093) #22 GMDS (ENSMMNG00015014105) #23 ENSMMNG00015010189 MYLK4 (ENSMMNG00015010218) #24 ENSMMNG00015010243 WRNIP1 (ENSMMNG00015010266) #25 ENSMMNG00015010309 #29 NQO2 (ENSMMNG00015010357) RIPK1 (ENSMMNG00015010383) BPHL (ENSMMNG00015010397) TUBB2B (ENSMMNG00015010464) PSMG4 (ENSMMNG00015010506) SLC22A23 (ENSMMNG00015010564) PXDC1 (ENSMMNG00015010618) PRPF4B (ENSMMNG00015010640) ECI2 (ENSMMNG00015010653) Atlantogenata ANCESTRAL SPECIES 86 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.j #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B ENSGT00940000155562 Afrotheria ANCESTRAL SPECIES 94 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.i.a.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00940000167514 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B Afrotheria_a ANCESTRAL SPECIES 96 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154931 #34 ENSGT00940000154519.i.a.a #29 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00940000167514 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209 ENSGT00390000004735.B Elephant MODERN SPECIES 447 ENSLAFG00000032503 DUSP22 (ENSLAFG00000018297) IRF4 (ENSLAFG00000017235) EXOC2 (ENSLAFG00000012946) ENSLAFG00000030668 FOXQ1 (ENSLAFG00000000082) #20 FOXF2 (ENSLAFG00000002074) #21 FOXC1 (ENSLAFG00000028626) #22 ENSLAFG00000029094 GMDS (ENSLAFG00000012336) #23 MYLK4 (ENSLAFG00000014597) #24 WRNIP1 (ENSLAFG00000014603) #25 SERPINB1 (ENSLAFG00000006794) #32 SERPINB9 (ENSLAFG00000007487) #34 ENSLAFG00000011947 #29 NQO2 (ENSLAFG00000031167) RIPK1 (ENSLAFG00000010059) BPHL (ENSLAFG00000010064) ENSLAFG00000010068 ENSLAFG00000031279 ENSLAFG00000027462 ENSLAFG00000032203 SLC22A23 (ENSLAFG00000012205) Xenarthra ANCESTRAL SPECIES 1871 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 Armadillo MODERN SPECIES 2439 FOXF2 (ENSDNOG00000031153) #21 FOXC1 (ENSDNOG00000004961) #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563.f ENSGT00940000156563.e ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000162917 ENSGT00390000002200.a.b ENSGT00940000154635.a ENSGT00950000182992.a.b.b ENSGT00940000154968 ENSGT00940000154824.a ENSGT00390000001688 ENSGT00940000157532 ENSGT00940000156113 ENSGT00940000164654 ENSGT00390000006658.a.b ENSGT00390000000521 Opossum DUPLICATION Opossum MODERN SPECIES NOL4L (ENSMODG00000019455) ASXL1 (ENSMODG00000019457) KIF3B (ENSMODG00000019460) POFUT1 (ENSMODG00000019462) PLAGL2 (ENSMODG00000040047) ENSMODG00000045445 ENSMODG00000039021 ENSMODG00000048272 HCK (ENSMODG00000019471) CCM2L (ENSMODG00000019474) XKR7 (ENSMODG00000019477) PDRG1 (ENSMODG00000019480) TTLL9 (ENSMODG00000023510) DUSP15 (ENSMODG00000019482) ENSMODG00000019483 ENSMODG00000019485 #22 MYLK2 (ENSMODG00000019486) TPX2 (ENSMODG00000019489) ENSMODG00000048832 BCL2L1 (ENSMODG00000019490) ENSMODG00000050742 ENSMODG00000019493 ID1 (ENSMODG00000019496) HM13 (ENSMODG00000019497) REM1 (ENSMODG00000019500) ENSMODG00000040921 ENSMODG00000049959 ENSMODG00000044081 ENSMODG00000036405 ENSMODG00000019504 ENSMODG00000034256 Opossum MODERN SPECIES 2 ENSMODG00000009756 ENSMODG00000028179 PXDC1 (ENSMODG00000008942) SLC22A23 (ENSMODG00000008782) PSMG4 (ENSMODG00000038283) TUBB2A (ENSMODG00000024592) BPHL (ENSMODG00000008512) RIPK1 (ENSMODG00000008505) ENSMODG00000008493 ENSMODG00000046608 DUSP22 (ENSMODG00000050834) IRF4 (ENSMODG00000008383) EXOC2 (ENSMODG00000008367) ENSMODG00000008316 #20 FOXF2 (ENSMODG00000008307) #21 ENSMODG00000008294 #22 ENSMODG00000024590 GMDS (ENSMODG00000008260) #23 ENSMODG00000028941 #24 WRNIP1 (ENSMODG00000008193) #25 ENSMODG00000047146 PSKH2 (ENSMODG00000008159) ATP6V0D2 (ENSMODG00000008153) WWP1 (ENSMODG00000008132) RMDN1 (ENSMODG00000008100) CPNE3 (ENSMODG00000008067) CNGB3 (ENSMODG00000008010) ENSMODG00000029240 ENSMODG00000043497 MMP16 (ENSMODG00000007939) RIPK2 (ENSMODG00000007716) Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563.f ENSGT00940000157153.u ENSGT00940000156563.e ENSGT00940000157153.v.b ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000162917 ENSGT00390000002200.a.b ENSGT00940000154635.a ENSGT00950000182992.a.b.b ENSGT00940000154968 ENSGT00940000154824.a ENSGT00390000001688 ENSGT00940000157532 ENSGT00940000156113 ENSGT00390000006658.a.b ENSGT00390000000521 ENSGT00940000153801.b Diprotodontia ANCESTRAL SPECIES 1 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563.f ENSGT00940000157153.u ENSGT00940000156563.e ENSGT00940000157153.v.b ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000162917 ENSGT00390000002200.a.b ENSGT00940000154635.a ENSGT00950000182992.a.b.b ENSGT00940000154968 ENSGT00940000154824.a ENSGT00390000001688 ENSGT00940000157532 ENSGT00940000156113 ENSGT00390000006658.a.b ENSGT00390000000521 ENSGT00940000153801.b Diprotodontia_a ANCESTRAL SPECIES ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563.f ENSGT00940000157153.u ENSGT00940000156563.e ENSGT00940000157153.v.b ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00530000063786.a.p ENSGT00940000162917 ENSGT00390000002200.a.b ENSGT00940000154635.a ENSGT00950000182992.a.b.b ENSGT00940000154968 ENSGT00940000154824.a ENSGT00390000001688 ENSGT00940000157532 ENSGT00940000156113 ENSGT00390000006658.a.b ENSGT00390000000521 Common wonbat MODERN SPECIES 34 ECI2 (ENSVURG00010004465) FAM217A (ENSVURG00010004476) PRPF4B (ENSVURG00010004483) ENSVURG00010004506 PXDC1 (ENSVURG00010004534) SLC22A23 (ENSVURG00010004586) PSMG4 (ENSVURG00010004617) TUBB2A (ENSVURG00010004658) BPHL (ENSVURG00010004675) RIPK1 (ENSVURG00010004694) ENSVURG00010004709 ENSVURG00010004723 IRF4 (ENSVURG00010004732) EXOC2 (ENSVURG00010004782) FOXF2 (ENSVURG00010004836) #21 FOXC1 (ENSVURG00010004905) #22 GMDS (ENSVURG00010004946) #23 ENSVURG00010004983 MYLK4 (ENSVURG00010005033) #24 WRNIP1 (ENSVURG00010005089) #25 ENSVURG00010005123 ENSVURG00010005129 PSKH2 (ENSVURG00010005146) ATP6V0D2 (ENSVURG00010005160) ENSVURG00010005178 WWP1 (ENSVURG00010005187) RMDN1 (ENSVURG00010005240) CPNE3 (ENSVURG00010005254) CNGB3 (ENSVURG00010005271) ENSVURG00010005290 MMP16 (ENSVURG00010005320) koala MODERN SPECIES 296 SLC22A23 (ENSPCIG00000000903) ENSPCIG00000000888 TUBB2B (ENSPCIG00000022050) BPHL (ENSPCIG00000022052) RIPK1 (ENSPCIG00000022064) ENSPCIG00000012249 ENSPCIG00000022067 DUSP22 (ENSPCIG00000037144) IRF4 (ENSPCIG00000022070) EXOC2 (ENSPCIG00000022073) FOXQ1 (ENSPCIG00000007926) #20 FOXF2 (ENSPCIG00000011639) #21 FOXC1 (ENSPCIG00000035615) #22 Wallaby MODERN SPECIES 11048 FOXC1 (ENSMEUG00000003279) #22 Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES 1 DNMT3B (ENSSHAG00000005171) COMMD7 (ENSSHAG00000027760) NOL4L (ENSSHAG00000030252) ASXL1 (ENSSHAG00000009893) KIF3B (ENSSHAG00000010523) POFUT1 (ENSSHAG00000011051) PLAGL2 (ENSSHAG00000011174) TM9SF4 (ENSSHAG00000011314) HCK (ENSSHAG00000011725) CCM2L (ENSSHAG00000012041) XKR7 (ENSSHAG00000032348) ENSSHAG00000023973 TTLL9 (ENSSHAG00000012511) ENSSHAG00000012740 ENSSHAG00000012864 ENSSHAG00000022905 #22 MYLK2 (ENSSHAG00000013080) TPX2 (ENSSHAG00000013326) BCL2L1 (ENSSHAG00000013693) ENSSHAG00000000043 ID1 (ENSSHAG00000026472) HM13 (ENSSHAG00000014206) ENSSHAG00000014434 ENSSHAG00000023425 ENSSHAG00000028028 ENSSHAG00000025997 ENSSHAG00000021134 ENSSHAG00000002453 SOX12 (ENSSHAG00000020613) ENSSHAG00000029313 TRIB3 (ENSSHAG00000005175) Tasmanian devil MODERN SPECIES PXDC1 (ENSSHAG00000009869) ENSSHAG00000029443 SLC22A23 (ENSSHAG00000023393) PSMG4 (ENSSHAG00000030196) TUBB2B (ENSSHAG00000007892) TUBB2A (ENSSHAG00000021520) BPHL (ENSSHAG00000014312) RIPK1 (ENSSHAG00000014446) ENSSHAG00000014609 ENSSHAG00000015165 ENSSHAG00000022026 IRF4 (ENSSHAG00000015592) EXOC2 (ENSSHAG00000001430) FOXQ1 (ENSSHAG00000012341) #20 FOXF2 (ENSSHAG00000012720) #21 FOXC1 (ENSSHAG00000023841) #22 GMDS (ENSSHAG00000031057) #23 MYLK4 (ENSSHAG00000026920) #24 ENSSHAG00000014703 #25 ENSSHAG00000025112 ENSSHAG00000031754 ENSSHAG00000022161 ENSSHAG00000009314 ENSSHAG00000028363 PSKH2 (ENSSHAG00000009964) ATP6V0D2 (ENSSHAG00000001125) WWP1 (ENSSHAG00000004236) RMDN1 (ENSSHAG00000005940) CPNE3 (ENSSHAG00000006680) ENSSHAG00000011704 MMP16 (ENSSHAG00000003247) Platypus DUPLICATION Platypus MODERN SPECIES 23 SSR1Y (ENSOANG00000048793) ENSOANG00000048797 ENSOANG00000041525 ENSOANG00000014951 ENSOANG00000014953 ENSOANG00000031691 TUBB2B (ENSOANG00000047005) ENSOANG00000036177 ENSOANG00000039611 ENSOANG00000040013 ENSOANG00000041660 ENSOANG00000044106 ENSOANG00000050518 ENSOANG00000042886 ENSOANG00000039862 #21 ENSOANG00000036916 #22 Platypus MODERN SPECIES 86 ECI2 (ENSOANG00000043493) ENSOANG00000047145 ENSOANG00000050718 ENSOANG00000028882 PXDC1 (ENSOANG00000050046) ENSOANG00000044215 ENSOANG00000040291 ENSOANG00000004797 ENSOANG00000014956 ENSOANG00000014957 ENSOANG00000014959 ENSOANG00000014901 ENSOANG00000006326 ENSOANG00000006327 ENSOANG00000041195 #21 ENSOANG00000041907 #22 GMDS (ENSOANG00000029425) #23 ENSOANG00000044472 ##24 WRNIP1 (ENSOANG00000015739) #25 ENSOANG00000015740 DROSHA (ENSOANG00000015744) CDH6 (ENSOANG00000015746) CDH9 (ENSOANG00000002505) CDH10 (ENSOANG00000002504) CDH12 (ENSOANG00000002500) CDH18 (ENSOANG00000002498) BASP1 (ENSOANG00000041988) MYO10 (ENSOANG00000009146) RETREG1 (ENSOANG00000009147) ZNF622 (ENSOANG00000021071) MARCHF11 (ENSOANG00000009145) Sauria ANCESTRAL SPECIES ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000167417 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.b ENSGT00940000154520.a ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a Lepidosauria ANCESTRAL SPECIES 2 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000167417 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a ENSGT00940000158137.c.a Episquamata ANCESTRAL SPECIES 1 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C.f ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.b ENSGT00940000154835.C.e.a.a ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a Laterata ANCESTRAL SPECIES 5 ENSGT00390000008360 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C.f ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.b ENSGT00940000154835.C.e.a.a ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a Common wall lizard MODERN SPECIES 15 PXDC1 (ENSPMRG00000005377) SLC22A23 (ENSPMRG00000005395) PSMG4 (ENSPMRG00000005411) ENSPMRG00000005418 ENSPMRG00000005422 ENSPMRG00000005427 ENSPMRG00000005443 BPHL (ENSPMRG00000005453) RIPK1 (ENSPMRG00000005461) DUSP22 (ENSPMRG00000005470) ENSPMRG00000005486 IRF4 (ENSPMRG00000005490) EXOC2 (ENSPMRG00000005505) FOXQ1 (ENSPMRG00000005547) #20 FOXF2 (ENSPMRG00000005550) #21 FOXC1 (ENSPMRG00000005555) #22 GMDS (ENSPMRG00000005558) #23 ENSPMRG00000005567 MYLK4 (ENSPMRG00000005583) #24 WRNIP1 (ENSPMRG00000005616) #25 SERPINB1 (ENSPMRG00000005641) #32 SERPINB8 (ENSPMRG00000005773) ENSPMRG00000005785 SERPINB10 (ENSPMRG00000005798) ENSPMRG00000005815 ENSPMRG00000005846 ENSPMRG00000005891 ENSPMRG00000005899 SERPINB11 (ENSPMRG00000005906) SERPINB5 (ENSPMRG00000005917) VPS4B (ENSPMRG00000005944) Argentine black and white tegu MODERN SPECIES 4 PRPF4B (ENSSMRG00000008213) PXDC1 (ENSSMRG00000008220) SLC22A23 (ENSSMRG00000008240) PSMG4 (ENSSMRG00000008242) ENSSMRG00000008243 TUBB2B (ENSSMRG00000008244) BPHL (ENSSMRG00000008245) RIPK1 (ENSSMRG00000008251) DUSP22 (ENSSMRG00000008261) NQO2 (ENSSMRG00000008267) IRF4 (ENSSMRG00000008285) EXOC2 (ENSSMRG00000008321) ENSSMRG00000008323 FOXQ1 (ENSSMRG00000008344) #20 FOXF2 (ENSSMRG00000008387) #21 FOXC1 (ENSSMRG00000008390) #22 GMDS (ENSSMRG00000008413) #23 MYLK4 (ENSSMRG00000008475) #24 WRNIP1 (ENSSMRG00000008479) #25 ENSSMRG00000008497 ENSSMRG00000008565 ENSSMRG00000008566 SERPINB10 (ENSSMRG00000008567) ENSSMRG00000008573 ENSSMRG00000008667 ENSSMRG00000008668 ENSSMRG00000008669 ENSSMRG00000008677 SERPINB11 (ENSSMRG00000008705) ENSSMRG00000008707 SERPINB5 (ENSSMRG00000008708) Toxicofera ANCESTRAL SPECIES 8 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000163866.a.b ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C.f ENSGT00940000154520.b ENSGT00940000165915 ENSGT00940000161205 Elapidae ANCESTRAL SPECIES 8 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153.e ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573.e #32 ENSGT00940000154573.f #32 ENSGT00940000154835.C.f.c.b.b ENSGT00940000154835.C.f.c.b.a ENSGT00940000154520.b.c ENSGT00940000161205 ENSGT00940000154520.b.d ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a Elapidae_a ANCESTRAL SPECIES 14 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153.f ENSGT00940000157153.e ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573.e #32 ENSGT00940000154573.f #32 Acanthophiinae ANCESTRAL SPECIES 16 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00940000175246 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153.f ENSGT00940000157153.e ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573.e #32 ENSGT00940000154573.f #32 Eastern brown snake MODERN SPECIES 75 ECI2 (ENSPTXG00000014830) PRPF4B (ENSPTXG00000014832) PXDC1 (ENSPTXG00000014833) SLC22A23 (ENSPTXG00000012278) PSMG4 (ENSPTXG00000012279) ENSPTXG00000012281 ENSPTXG00000012285 BPHL (ENSPTXG00000012286) RIPK1 (ENSPTXG00000012287) NQO2 (ENSPTXG00000012288) ENSPTXG00000012290 ENSPTXG00000012291 IRF4 (ENSPTXG00000012295) EXOC2 (ENSPTXG00000012355) FOXF2 (ENSPTXG00000012358) #21 FOXC1 (ENSPTXG00000012359) #22 GMDS (ENSPTXG00000012360) #23 MYLK4 (ENSPTXG00000012362) #24 WRNIP1 (ENSPTXG00000012366) #25 ENSPTXG00000012367 #32 ENSPTXG00000012368 #32 Mainland tiger snake MODERN SPECIES 84 PRPF4B (ENSNSUG00000005540) PXDC1 (ENSNSUG00000005538) SLC22A23 (ENSNSUG00000005534) PSMG4 (ENSNSUG00000005533) ENSNSUG00000005532 ENSNSUG00000005510 TUBB2A (ENSNSUG00000005509) BPHL (ENSNSUG00000005503) RIPK1 (ENSNSUG00000005501) NQO2 (ENSNSUG00000005474) ENSNSUG00000005471 ENSNSUG00000005470 IRF4 (ENSNSUG00000005456) EXOC2 (ENSNSUG00000005455) FOXQ1 (ENSNSUG00000005453) #20 FOXC1 (ENSNSUG00000005451) #22 GMDS (ENSNSUG00000005444) #23 MYLK4 (ENSNSUG00000005436) #24 WRNIP1 (ENSNSUG00000005435) #25 ENSNSUG00000005434 #32 ENSNSUG00000005433 #32 Indian cobra MODERN SPECIES 2 ENSNNAG00000008323 ECI2 (ENSNNAG00000008208) PRPF4B (ENSNNAG00000007587) PXDC1 (ENSNNAG00000016457) SLC22A23 (ENSNNAG00000016441) PSMG4 (ENSNNAG00000016435) ENSNNAG00000016425 ENSNNAG00000016415 BPHL (ENSNNAG00000016410) ENSNNAG00000016405 NQO2 (ENSNNAG00000016400) DUSP22 (ENSNNAG00000016392) IRF4 (ENSNNAG00000016381) ENSNNAG00000016376 FOXF2 (ENSNNAG00000016367) #21 FOXC1 (ENSNNAG00000016361) #22 GMDS (ENSNNAG00000016354) #23 MYLK4 (ENSNNAG00000016322) #24 WRNIP1 (ENSNNAG00000016296) #25 SERPINB1 (ENSNNAG00000016284) #32 ENSNNAG00000016209 ENSNNAG00000016179 ENSNNAG00000016150 SERPINB10 (ENSNNAG00000016136) ENSNNAG00000016123 ENSNNAG00000016117 SERPINB11 (ENSNNAG00000016062) SERPINB5 (ENSNNAG00000016038) VPS4B (ENSNNAG00000016008) KDSR (ENSNNAG00000015949) PHLPP1 (ENSNNAG00000015670) Lizard MODERN SPECIES 861 ENSACAG00000017642 PRPF4B (ENSACAG00000017650) PXDC1 (ENSACAG00000017660) SLC22A23 (ENSACAG00000042433) ENSACAG00000035794 ENSACAG00000038434 ENSACAG00000039065 BPHL (ENSACAG00000017692) RIPK1 (ENSACAG00000017693) NQO2 (ENSACAG00000017701) DUSP22 (ENSACAG00000017705) IRF4 (ENSACAG00000017711) EXOC2 (ENSACAG00000017715) FOXQ1 (ENSACAG00000038044) #20 ENSACAG00000017732 FOXC1 (ENSACAG00000044418) #22 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a Cryptodira ANCESTRAL SPECIES 7 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.a ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a ENSGT00940000158137.c.a Testudinoidea ANCESTRAL SPECIES ENSGT00940000154543.b ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C.p.a ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154835.C.p.b.b ENSGT00940000154835.C.p.b.a ENSGT00940000154520.a.d ENSGT00940000161560.a ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a Emydidae ANCESTRAL SPECIES ENSGT00390000008360 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C.p.a ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.a.c ENSGT00940000154835.C.p.b.b ENSGT00940000154835.C.p.b.a ENSGT00940000154520.a.d ENSGT00940000161560.a ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 painted turtle MODERN SPECIES 2427 ENSCPBG00000009043 ENSCPBG00000009044 ENSCPBG00000009048 PXDC1 (ENSCPBG00000009051) ENSCPBG00000009054 SLC22A23 (ENSCPBG00000009061) PSMG4 (ENSCPBG00000009067) ENSCPBG00000009070 ENSCPBG00000009079 BPHL (ENSCPBG00000009096) RIPK1 (ENSCPBG00000009112) IRF4 (ENSCPBG00000009145) EXOC2 (ENSCPBG00000009169) FOXQ1 (ENSCPBG00000009662) #20 FOXF2 (ENSCPBG00000009665) #21 FOXC1 (ENSCPBG00000009668) #22 GMDS (ENSCPBG00000009672) #23 MYLK4 (ENSCPBG00000009690) #24 WRNIP1 (ENSCPBG00000009703) #25 SERPINB1 (ENSCPBG00000009708) #32 ENSCPBG00000009713 ENSCPBG00000009720 ENSCPBG00000009765 ENSCPBG00000010925 ENSCPBG00000010929 ENSCPBG00000010934 ENSCPBG00000010961 ENSCPBG00000010963 ENSCPBG00000010966 Three-toed box turtle MODERN SPECIES 20 FOXQ1 (ENSTMTG00000009347) #20 FOXF2 (ENSTMTG00000009332) #21 FOXC1 (ENSTMTG00000009320) #22 GMDS (ENSTMTG00000009296) #23 MYLK4 (ENSTMTG00000009215) #24 WRNIP1 (ENSTMTG00000009192) #25 SERPINB1 (ENSTMTG00000009178) #32 ENSTMTG00000009166 ENSTMTG00000008593 ENSTMTG00000008098 ENSTMTG00000008043 ENSTMTG00000007359 SERPINB11 (ENSTMTG00000006987) SERPINB5 (ENSTMTG00000006943) VPS4B (ENSTMTG00000006914) KDSR (ENSTMTG00000006884) BCL2 (ENSTMTG00000006876) ENSTMTG00000006860 Testudinidae ANCESTRAL SPECIES 4 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150.n ENSGT00940000154150.m.a ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00940000174615 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C.p.a ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154835.C.p.b.b ENSGT00940000154835.C.p.b.a ENSGT00940000154520.a.c.a ENSGT00940000161560.b ENSGT00940000154520.a.c.b ENSGT00940000154520.a.d ENSGT00940000161560.a Goode s thornscrub tortoise MODERN SPECIES 11 PRPF4B (ENSGEVG00005000196) ENSGEVG00005000106 PXDC1 (ENSGEVG00005000084) SLC22A23 (ENSGEVG00005000069) PSMG4 (ENSGEVG00005000058) ENSGEVG00005000037 ENSGEVG00005006301 BPHL (ENSGEVG00005006271) RIPK1 (ENSGEVG00005006245) NQO2 (ENSGEVG00005006223) ENSGEVG00005006207 DUSP22 (ENSGEVG00005006150) IRF4 (ENSGEVG00005006121) EXOC2 (ENSGEVG00005006088) FOXF2 (ENSGEVG00005006060) #21 FOXC1 (ENSGEVG00005006039) #22 ENSGEVG00005006016 GMDS (ENSGEVG00005005964) #23 MYLK4 (ENSGEVG00005005851) #24 WRNIP1 (ENSGEVG00005005814) #25 SERPINB1 (ENSGEVG00005005167) #32 ENSGEVG00005004941 SERPINB10 (ENSGEVG00005004655) ENSGEVG00005004529 ENSGEVG00005004517 ENSGEVG00005004503 ENSGEVG00005004451 ENSGEVG00005004429 ENSGEVG00005004389 ENSGEVG00005004357 SERPINB11 (ENSGEVG00005004059) Abingdon island giant tortoise MODERN SPECIES 1697 FOXC1 (ENSCABG00000002156) #22 ENSCABG00000002155 GMDS (ENSCABG00000002152) #23 MYLK4 (ENSCABG00000002147) #24 WRNIP1 (ENSCABG00000002141) #25 SERPINB1 (ENSCABG00000002108) #32 ENSCABG00000002103 ENSCABG00000002102 SERPINB10 (ENSCABG00000002101) ENSCABG00000001682 ENSCABG00000001147 ENSCABG00000001049 ENSCABG00000001046 ENSCABG00000001041 ENSCABG00000000784 SERPINB5 (ENSCABG00000000765) Archosauria ANCESTRAL SPECIES ENSGT00940000155105 ENSGT00940000154543.b ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915 ENSGT00940000161205 ENSGT00940000154520.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a Australian saltwater crocodile MODERN SPECIES 41 DNMT3B (ENSCPRG00005007963) COMMD7 (ENSCPRG00005007844) NOL4L (ENSCPRG00005007829) ASXL1 (ENSCPRG00005007822) KIF3B (ENSCPRG00005007815) POFUT1 (ENSCPRG00005007812) PLAGL2 (ENSCPRG00005007808) TM9SF4 (ENSCPRG00005007801) HCK (ENSCPRG00005007787) CCM2L (ENSCPRG00005007754) XKR7 (ENSCPRG00005007747) PDRG1 (ENSCPRG00005007741) TTLL9 (ENSCPRG00005007733) DUSP15 (ENSCPRG00005007729) ENSCPRG00005007725 ENSCPRG00005007724 #22 TPX2 (ENSCPRG00005007711) BCL2L1 (ENSCPRG00005007703) COX4I2 (ENSCPRG00005007698) ENSCPRG00005007695 HM13 (ENSCPRG00005007684) REM1 (ENSCPRG00005007678) ENSCPRG00005007676 ENSCPRG00005007673 RBCK1 (ENSCPRG00005007671) TBC1D20 (ENSCPRG00005007669) ENSCPRG00005007664 TCF15 (ENSCPRG00005007662) SRXN1 (ENSCPRG00005007661) SCRT2 (ENSCPRG00005007655) SLC52A3 (ENSCPRG00005007653) Aves ANCESTRAL SPECIES 24 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 Neognathae ANCESTRAL SPECIES ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Neognathae_c ANCESTRAL SPECIES 1 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Golden eagle MODERN SPECIES 9 ENSACCG00020012468 ECI2 (ENSACCG00020012393) PRPF4B (ENSACCG00020012258) PXDC1 (ENSACCG00020012218) SLC22A23 (ENSACCG00020012173) PSMG4 (ENSACCG00020012113) ENSACCG00020012081 BPHL (ENSACCG00020011982) RIPK1 (ENSACCG00020011942) NQO2 (ENSACCG00020011913) DUSP22 (ENSACCG00020011886) IRF4 (ENSACCG00020011853) EXOC2 (ENSACCG00020011786) FOXQ1 (ENSACCG00020011745) #20 FOXF2 (ENSACCG00020011731) #21 FOXC1 (ENSACCG00020011716) #22 GMDS (ENSACCG00020011687) #23 MYLK4 (ENSACCG00020011621) #24 WRNIP1 (ENSACCG00020011491) #25 SERPINB1 (ENSACCG00020016192) #32 SERPINB8 (ENSACCG00020016184) ENSACCG00020016175 ENSACCG00020016163 SERPINB10 (ENSACCG00020016146) ENSACCG00020016115 ENSACCG00020016092 ENSACCG00020016076 ENSACCG00020016053 SERPINB11 (ENSACCG00020016030) SERPINB5 (ENSACCG00020016021) VPS4B (ENSACCG00020016009) Kakapo DUPLICATION Kakapo MODERN SPECIES 4 ENSSHBG00005000085 ENSSHBG00005000078 ENSSHBG00005000070 ENSSHBG00005000061 ENSSHBG00005000056 ENSSHBG00005000041 ENSSHBG00005000008 ENSSHBG00005000404 ENSSHBG00005000403 ENSSHBG00005000401 ENSSHBG00005000400 ENSSHBG00005000397 ENSSHBG00005000395 ENSSHBG00005000393 ENSSHBG00005000392 ENSSHBG00005000390 #22 ENSSHBG00005000389 ENSSHBG00005000387 ENSSHBG00005000386 ENSSHBG00005000384 ENSSHBG00005000380 ENSSHBG00005000377 ENSSHBG00005000375 ENSSHBG00005000373 ENSSHBG00005000372 ENSSHBG00005000370 ENSSHBG00005000369 ENSSHBG00005000360 ENSSHBG00005000347 ENSSHBG00005000344 ENSSHBG00005000343 Kakapo MODERN SPECIES MTCL1 (ENSSHBG00005005903) RAB12 (ENSSHBG00005000650) ENSSHBG00005000649 SLC22A23 (ENSSHBG00005004433) PSMG4 (ENSSHBG00005004425) ENSSHBG00005004422 ENSSHBG00005004411 BPHL (ENSSHBG00005004398) RIPK1 (ENSSHBG00005004382) NQO2 (ENSSHBG00005004374) DUSP22 (ENSSHBG00005004366) IRF4 (ENSSHBG00005004353) EXOC2 (ENSSHBG00005004310) FOXQ1 (ENSSHBG00005004279) #20 FOXF2 (ENSSHBG00005004277) #21 FOXC1 (ENSSHBG00005004271) #22 GMDS (ENSSHBG00005004265) #23 MYLK4 (ENSSHBG00005004245) #24 WRNIP1 (ENSSHBG00005004231) #25 SERPINB1 (ENSSHBG00005004225) #32 SERPINB8 (ENSSHBG00005004219) ENSSHBG00005004209 ENSSHBG00005004200 SERPINB10 (ENSSHBG00005004190) ENSSHBG00005004161 ENSSHBG00005004146 ENSSHBG00005004070 ENSSHBG00005004047 SERPINB11 (ENSSHBG00005004037) SERPINB5 (ENSSHBG00005004029) VPS4B (ENSSHBG00005004019) Passeriformes ANCESTRAL SPECIES ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Great tit MODERN SPECIES 11 ENSPMJG00000018353 ECI2 (ENSPMJG00000018355) PRPF4B (ENSPMJG00000018359) PXDC1 (ENSPMJG00000018361) SLC22A23 (ENSPMJG00000018363) PSMG4 (ENSPMJG00000018368) ENSPMJG00000018369 BPHL (ENSPMJG00000018371) RIPK1 (ENSPMJG00000018375) ENSPMJG00000018377 DUSP22 (ENSPMJG00000018378) IRF4 (ENSPMJG00000018379) EXOC2 (ENSPMJG00000018383) FOXQ1 (ENSPMJG00000018389) #20 FOXF2 (ENSPMJG00000018391) #21 FOXC1 (ENSPMJG00000018394) #22 GMDS (ENSPMJG00000000076) #23 MYLK4 (ENSPMJG00000000147) #24 WRNIP1 (ENSPMJG00000000158) #25 SERPINB1 (ENSPMJG00000000195) #32 SERPINB8 (ENSPMJG00000000213) ENSPMJG00000000225 ENSPMJG00000000246 SERPINB10 (ENSPMJG00000000250) ENSPMJG00000000265 ENSPMJG00000000301 ENSPMJG00000000329 ENSPMJG00000001360 SERPINB11 (ENSPMJG00000001400) SERPINB5 (ENSPMJG00000001417) VPS4B (ENSPMJG00000001445) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT01040000244549 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000163866.a.b ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Flycatcher MODERN SPECIES 11 PRPF4B (ENSFALG00000013150) PXDC1 (ENSFALG00000013145) SLC22A23 (ENSFALG00000026713) ENSFALG00000013119 PSMG4 (ENSFALG00000014789) ENSFALG00000013131 BPHL (ENSFALG00000013104) RIPK1 (ENSFALG00000013093) ENSFALG00000028950 ENSFALG00000023587 DUSP22 (ENSFALG00000029026) IRF4 (ENSFALG00000013071) ENSFALG00000025007 EXOC2 (ENSFALG00000013064) ENSFALG00000026073 ENSFALG00000027331 #22 GMDS (ENSFALG00000013059) #23 MYLK4 (ENSFALG00000023986) #24 WRNIP1 (ENSFALG00000013052) #25 SERPINB1 (ENSFALG00000028871) #32 ENSFALG00000013046 ENSFALG00000024634 ENSFALG00000013044 ENSFALG00000013041 SERPINB10 (ENSFALG00000013037) ENSFALG00000013025 ENSFALG00000013018 SERPINB11 (ENSFALG00000013014) SERPINB5 (ENSFALG00000013011) VPS4B (ENSFALG00000013005) KDSR (ENSFALG00000024868) Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT01040000244549 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000163866.a.b ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Passeroidea ANCESTRAL SPECIES 2 ENSGT00940000155562 ENSGT00390000009209 ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT01040000244549 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000163866.a.b ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Common canary MODERN SPECIES ENSSCAG00000001965 ECI2 (ENSSCAG00000001987) PRPF4B (ENSSCAG00000001999) PXDC1 (ENSSCAG00000002010) SLC22A23 (ENSSCAG00000002027) PSMG4 (ENSSCAG00000002041) TUBB2B (ENSSCAG00000002047) BPHL (ENSSCAG00000002072) RIPK1 (ENSSCAG00000002077) NQO2 (ENSSCAG00000002088) DUSP22 (ENSSCAG00000002092) IRF4 (ENSSCAG00000002096) ENSSCAG00000002099 EXOC2 (ENSSCAG00000002115) FOXF2 (ENSSCAG00000002132) #21 ENSSCAG00000002139 #22 GMDS (ENSSCAG00000002174) #23 MYLK4 (ENSSCAG00000002209) #24 WRNIP1 (ENSSCAG00000002234) #25 SERPINB1 (ENSSCAG00000002246) #32 ENSSCAG00000002253 ENSSCAG00000002262 ENSSCAG00000002275 ENSSCAG00000002293 ENSSCAG00000002371 SERPINB10 (ENSSCAG00000002377) ENSSCAG00000002385 ENSSCAG00000002416 ENSSCAG00000002481 ENSSCAG00000002489 SERPINB11 (ENSSCAG00000002494) Zebra finch MODERN SPECIES 12 ECI2 (ENSTGUG00000002230) PRPF4B (ENSTGUG00000002208) PXDC1 (ENSTGUG00000002202) SLC22A23 (ENSTGUG00000002194) PSMG4 (ENSTGUG00000023303) ENSTGUG00000028536 BPHL (ENSTGUG00000002178) RIPK1 (ENSTGUG00000002170) NQO2 (ENSTGUG00000002159) DUSP22 (ENSTGUG00000027185) IRF4 (ENSTGUG00000002144) EXOC2 (ENSTGUG00000002131) ENSTGUG00000022060 FOXQ1 (ENSTGUG00000018779) #20 ENSTGUG00000002129 FOXC1 (ENSTGUG00000002127) #22 GMDS (ENSTGUG00000002124) #23 MYLK4 (ENSTGUG00000019999) #24 WRNIP1 (ENSTGUG00000002117) #25 SERPINB1 (ENSTGUG00000002101) #32 ENSTGUG00000021604 ENSTGUG00000027893 ENSTGUG00000002079 ENSTGUG00000028052 ENSTGUG00000002078 ENSTGUG00000025890 ENSTGUG00000002067 ENSTGUG00000018988 SERPINB11 (ENSTGUG00000029378) SERPINB5 (ENSTGUG00000002060) VPS4B (ENSTGUG00000002043) Galloanserae ANCESTRAL SPECIES ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209.d ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Anatidae ANCESTRAL SPECIES 3 ENSGT00940000166969.b ENSGT00390000009802.a ENSGT00940000155562 ENSGT00390000009209.d ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000163866.b ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000154520.b ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 Duck MODERN SPECIES 10 TRIO (ENSAPLG00000008508) ENSAPLG00000017143 OTULINL (ENSAPLG00000009753) PRPF4B (ENSAPLG00000009869) ENSAPLG00000013227 SLC22A23 (ENSAPLG00000015771) PSMG4 (ENSAPLG00000023970) TUBB2A (ENSAPLG00000027345) BPHL (ENSAPLG00000015545) RIPK1 (ENSAPLG00000015420) NQO2 (ENSAPLG00000015289) DUSP22 (ENSAPLG00000015108) IRF4 (ENSAPLG00000014646) EXOC2 (ENSAPLG00000013910) ENSAPLG00000017427 FOXC1 (ENSAPLG00000017354) #22 ENSAPLG00000026009 GMDS (ENSAPLG00000013864) #23 MYLK4 (ENSAPLG00000013701) #24 WRNIP1 (ENSAPLG00000013539) #25 SERPINB1 (ENSAPLG00000012958) #32 SERPINB8 (ENSAPLG00000012569) ENSAPLG00000001572 CDH10 (ENSAPLG00000007403) ENSAPLG00000023454 CDH9 (ENSAPLG00000005927) ENSAPLG00000018519 ENSAPLG00000017576 CDH6 (ENSAPLG00000005708) DROSHA (ENSAPLG00000004372) C5orf22 (ENSAPLG00000004273) Pink-footed goose MODERN SPECIES 55 OTULINL (ENSABRG00000011720) PRPF4B (ENSABRG00000011735) PXDC1 (ENSABRG00000011748) SLC22A23 (ENSABRG00000011756) PSMG4 (ENSABRG00000011758) ENSABRG00000011762 ENSABRG00000011765 ENSABRG00000011768 BPHL (ENSABRG00000011769) DUSP22 (ENSABRG00000011775) RIPK1 (ENSABRG00000011788) NQO2 (ENSABRG00000011803) IRF4 (ENSABRG00000011809) EXOC2 (ENSABRG00000011820) FOXF2 (ENSABRG00000011864) #21 FOXC1 (ENSABRG00000011867) #22 GMDS (ENSABRG00000011874) #23 MYLK4 (ENSABRG00000011911) #24 WRNIP1 (ENSABRG00000011943) #25 SERPINB1 (ENSABRG00000011958) #32 SERPINB8 (ENSABRG00000011968) ENSABRG00000011978 ENSABRG00000011985 SERPINB10 (ENSABRG00000011997) ENSABRG00000012008 ENSABRG00000012019 ENSABRG00000012025 ENSABRG00000012034 SERPINB11 (ENSABRG00000012070) SERPINB5 (ENSABRG00000012078) VPS4B (ENSABRG00000012085) Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000155106 ENSGT00940000155105 ENSGT00940000155562 ENSGT00390000009209.d ENSGT00940000157354 ENSGT00390000011804 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000162527 #21 ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b ENSGT00940000161205 ENSGT00940000154520.a.b ENSGT00940000154520.a.a.b ENSGT00940000154520.a.a.a ENSGT00940000161560 ENSGT00940000160674 ENSGT00940000154973 ENSGT00940000156961 Japanese quail DUPLICATION Japanese quail MODERN SPECIES 12 DNMT3B (ENSCJPG00005005284) COMMD7 (ENSCJPG00005005290) NOL4L (ENSCJPG00005005303) ASXL1 (ENSCJPG00005005314) KIF3B (ENSCJPG00005005319) POFUT1 (ENSCJPG00005005321) PLAGL2 (ENSCJPG00005005331) TM9SF4 (ENSCJPG00005005334) HCK (ENSCJPG00005005344) CCM2L (ENSCJPG00005005796) XKR7 (ENSCJPG00005005801) TTLL9 (ENSCJPG00005005803) PDRG1 (ENSCJPG00005005808) DUSP15 (ENSCJPG00005005810) ENSCJPG00005005811 ENSCJPG00005005813 #22 MYLK2 (ENSCJPG00005005814) TPX2 (ENSCJPG00005005815) BCL2L1 (ENSCJPG00005005819) ENSCJPG00005005820 HM13 (ENSCJPG00005005821) REM1 (ENSCJPG00005005823) SOX12 (ENSCJPG00005005825) NRSN2 (ENSCJPG00005005826) TBC1D20 (ENSCJPG00005005827) ENSCJPG00005005828 TCF15 (ENSCJPG00005005829) SRXN1 (ENSCJPG00005005830) SCRT2 (ENSCJPG00005005831) SLC52A3 (ENSCJPG00005005832) FAM110A (ENSCJPG00005005833) Japanese quail MODERN SPECIES 11 BCL2 (ENSCJPG00005016773) ENSCJPG00005016772 PHLPP1 (ENSCJPG00005016771) ZCCHC2 (ENSCJPG00005016739) TNFRSF11A (ENSCJPG00005016738) RELCH (ENSCJPG00005016435) PIGN (ENSCJPG00005015650) RNF152 (ENSCJPG00005015648) CDH20 (ENSCJPG00005015646) NQO2 (ENSCJPG00005015634) DUSP22 (ENSCJPG00005015632) IRF4 (ENSCJPG00005015631) EXOC2 (ENSCJPG00005015629) FOXQ1 (ENSCJPG00005015625) #20 FOXF2 (ENSCJPG00005015624) #21 FOXC1 (ENSCJPG00005015623) #22 GMDS (ENSCJPG00005015622) #23 MYLK4 (ENSCJPG00005015619) #24 ENSCJPG00005015618 SERPINB1 (ENSCJPG00005015617) #32 SERPINB8 (ENSCJPG00005015616) ENSCJPG00005015613 ENSCJPG00005015612 SERPINB10 (ENSCJPG00005015611) ENSCJPG00005015610 ENSCJPG00005015609 ENSCJPG00005015608 ENSCJPG00005015604 MC4R (ENSCJPG00005015602) C5orf22 (ENSCJPG00005015600) DROSHA (ENSCJPG00005015599) Anura ANCESTRAL SPECIES 1 ENSGT00940000155562 ENSGT00910000144592 ENSGT00390000009209 ENSGT00940000157354 ENSGT00940000167364 ENSGT00390000004877 ENSGT00940000154150 ENSGT00390000004746 ENSGT00940000159347 ENSGT00940000156563 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b #20 ENSGT00940000163866.a.b ENSGT00940000162303.b #22 ENSGT00440000033640 #23 ENSGT00940000156211.b #24 ENSGT00390000008538 #25 ENSGT00940000154520 ENSGT00940000161560 ENSGT00940000154573 #32 ENSGT00940000154835.C ENSGT00940000160674 ENSGT00940000164275.d ENSGT00940000154973 ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a ENSGT00950000183102.A.b.a ENSGT00940000158137.c.a ENSGT00520000055637.A.a Leishan spiny toad MODERN SPECIES 8 SLC22A23 (ENSLLEG00000007451) ENSLLEG00000007528 ENSLLEG00000007539 TUBB2A (ENSLLEG00000007597) ENSLLEG00000007696 RIPK1 (ENSLLEG00000007756) NQO2 (ENSLLEG00000007807) DUSP22 (ENSLLEG00000007865) IRF4 (ENSLLEG00000007909) EXOC2 (ENSLLEG00000007960) ENSLLEG00000008305 ENSLLEG00000008326 ENSLLEG00000008351 FOXQ1 (ENSLLEG00000008367) #20 ENSLLEG00000008427 FOXC1 (ENSLLEG00000008452) #22 ENSLLEG00000008516 #23 ENSLLEG00000008883 ENSLLEG00000008896 MYLK4 (ENSLLEG00000008947) #24 WRNIP1 (ENSLLEG00000009326) #25 SERPINB1 (ENSLLEG00000009408) #32 ENSLLEG00000009563 ENSLLEG00000010341 SERPINB8 (ENSLLEG00000010369) SERPINB5 (ENSLLEG00000010481) ENSLLEG00000010584 ENSLLEG00000010648 ENSLLEG00000010727 VPS4B (ENSLLEG00000010866) KDSR (ENSLLEG00000011595) Frog MODERN SPECIES 6 ENSXETG00000049374 XB5835883 [provisional] (ENSXETG00000018031) psmg4 (ENSXETG00000036272) slc22a23 (ENSXETG00000038931) pxdc1 (ENSXETG00000018024) XB5799681 [provisional:znf26] (ENSXETG00000025594) prpf4b (ENSXETG00000011416) ripk1 (ENSXETG00000011415) dusp22 (ENSXETG00000011414) irf4 (ENSXETG00000011413) exoc2 (ENSXETG00000011411) ENSXETG00000046984 ENSXETG00000045049 FOXQ1 (ENSXETG00000040929) #20 foxf2 (ENSXETG00000041951) foxc1 (ENSXETG00000000594) #22 gmds (ENSXETG00000000600) #23 ENSXETG00000043308 ENSXETG00000045892 mylk4 (ENSXETG00000000614) #24 wrnip1 (ENSXETG00000031674) #25 ENSXETG00000042280 serpinb6 (ENSXETG00000027588) serpinb10 (ENSXETG00000032542) serpinb5 (ENSXETG00000027590) XB5740036 [provisional] (ENSXETG00000030683) XB5872372 [provisional] (ENSXETG00000000637) vps4b (ENSXETG00000000638) kdsr (ENSXETG00000040600) bcl2 (ENSXETG00000035771) ENSXETG00000027592 Coelacanth MODERN SPECIES 2003 CCM2L (ENSLACG00000002940) XKR7 (ENSLACG00000003868) PDRG1 (ENSLACG00000005905) TTLL9 (ENSLACG00000006586) irf10 (ENSLACG00000007228) ENSLACG00000008269 #22 TPX2 (ENSLACG00000009301) BCL2L1 (ENSLACG00000009939)