Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00390000000560 #8	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT00950000184618	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34
Cetacea	ANCESTRAL SPECIES	9	ENSGT00390000000560 #8	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT00950000184618	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a.f #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT00940000169457	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT00940000166200	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00390000000560 #8	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT00940000170859 #18	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT00950000184618	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a.f #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01100000263580 #30	ENSGT00940000166200	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT00940000170859 #18	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00520000060469	ENSGT00940000153116.C.a ##20	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a.f #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01100000263580 #30	ENSGT00940000166200	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00390000000560 #8	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT00940000170859 #18	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00940000153116.C.a ##20	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a.f #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01100000263580 #30	ENSGT00940000166200	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000160404 #7	ENSGT00390000000560 #8	ENSGT00940000156724 #9	ENSGT00940000158199 #10	ENSGT00940000159324 #11	ENSGT00940000157157.b #12	ENSGT00940000160015 #13	ENSGT00390000008726.h.a #14	ENSGT00390000006452.b.a #15	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT00940000170859 #18	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a.f #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01100000263580 #30	ENSGT00940000166200	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
Narwhal	MODERN SPECIES	312	SNAPC4 (ENSMMNG00015017988) #7	ENTR1 (ENSMMNG00015018088) #8	PMPCA (ENSMMNG00015018250) #9	INPP5E (ENSMMNG00015018352) #10	SEC16A (ENSMMNG00015018406) #11	NOTCH1 (ENSMMNG00015018566) #12	EGFL7 (ENSMMNG00015018637) #13	AGPAT2 (ENSMMNG00015018689) #14	DIPK1B (ENSMMNG00015018734) #15	ENSMMNG00015018813 #16	LCN6 (ENSMMNG00015018885) #17	ENSMMNG00015018915 #18	ENSMMNG00015018937 #19	TMEM141 (ENSMMNG00015018964) #20	ENSMMNG00015018981 #21	RABL6 (ENSMMNG00015019023) #22	AJM1 (ENSMMNG00015019084) #23	ENSMMNG00015019093 #24	MAMDC4 (ENSMMNG00015019122) #25	EDF1 (ENSMMNG00015019204) #26	TRAF2 (ENSMMNG00015019230) #27	FBXW5 (ENSMMNG00015019281) #28	C8G (ENSMMNG00015019320) #29	PTGDS (ENSMMNG00015019351) #30	PAXX (ENSMMNG00015019378) #31	CLIC3 (ENSMMNG00015019407) #32	FUT7 (ENSMMNG00015019751) #33	NPDC1 (ENSMMNG00015019790) #34	ENTPD2 (ENSMMNG00015019902) #35	SAPCD2 (ENSMMNG00015019948) #36	UAP1L1 (ENSMMNG00015019976) #37
Beluga whale	MODERN SPECIES	19	SNAPC4 (ENSDLEG00000019669) #7	SDCCAG3 (ENSDLEG00000019648) #8	PMPCA (ENSDLEG00000019404) #9	INPP5E (ENSDLEG00000019359) #10	SEC16A (ENSDLEG00000016491) #11	NOTCH1 (ENSDLEG00000016186) #12	EGFL7 (ENSDLEG00000016110) #13	AGPAT2 (ENSDLEG00000016099) #14	FAM69B (ENSDLEG00000016090) #15	ENSDLEG00000016061	LCN6 (ENSDLEG00000016024) #17	ENSDLEG00000016011 #18	ENSDLEG00000015991 ##17	TMEM141 (ENSDLEG00000015982) #20	ENSDLEG00000015951 ##20	RABL6 (ENSDLEG00000015563) #22	CUNH9orf172 (ENSDLEG00000015531) #23	ENSDLEG00000015526 ##24	MAMDC4 (ENSDLEG00000015426) #25	EDF1 (ENSDLEG00000015396) #26	TRAF2 (ENSDLEG00000015358) #27	FBXW5 (ENSDLEG00000015343) #28	C8G (ENSDLEG00000015332) #29	PTGDS (ENSDLEG00000015309) #30	ENSDLEG00000015295	PAXX (ENSDLEG00000015266) #31	ABCA2 (ENSDLEG00000014944)	FUT7 (ENSDLEG00000014892) #33	NPDC1 (ENSDLEG00000014877) #34	ENTPD2 (ENSDLEG00000014672) #35	SAPCD2 (ENSDLEG00000014642) #36
Dolphin	MODERN SPECIES	2892														ENSTTRG00000021427	ENSTTRG00000002630 ##20	RABL6 (ENSTTRG00000002643) #22	ENSTTRG00000002659	MAMDC4 (ENSTTRG00000002663) #25	EDF1 (ENSTTRG00000002668) #26	TRAF2 (ENSTTRG00000002669) #27
Sperm whale	MODERN SPECIES	4	SNAPC4 (ENSPCTG00005010069) #7	ENTR1 (ENSPCTG00005009894) #8	PMPCA (ENSPCTG00005009778) #9	INPP5E (ENSPCTG00005009723) #10	SEC16A (ENSPCTG00005009503) #11	NOTCH1 (ENSPCTG00005009415) #12	EGFL7 (ENSPCTG00005009325) #13	AGPAT2 (ENSPCTG00005009252) #14	DIPK1B (ENSPCTG00005009146) #15	ENSPCTG00005009085	LCN8 (ENSPCTG00005008995) ##17	ENSPCTG00005008947	ENSPCTG00005008909 #20	ENSPCTG00005008876 #20	CCDC183 (ENSPCTG00005008792) #21	RABL6 (ENSPCTG00005008721) #22	AJM1 (ENSPCTG00005008687) #23	PHPT1 (ENSPCTG00005008655) #24	MAMDC4 (ENSPCTG00005008346) #25	FBXW5 (ENSPCTG00005008288) #28	TRAF2 (ENSPCTG00005008255) #27	LCNL1 (ENSPCTG00005008230)	PTGDS (ENSPCTG00005008209) #30	SAPCD2 (ENSPCTG00005008182) #36	UAP1L1 (ENSPCTG00005008156) #37	ENSPCTG00005008108	DPP7 (ENSPCTG00005008071)	ENSPCTG00005008034	ENSPCTG00005008020	GRIN1 (ENSPCTG00005007612)	LRRC26 (ENSPCTG00005007520)
Blue whale	MODERN SPECIES	17	SNAPC4 (ENSBMSG00010005976) #7	ENTR1 (ENSBMSG00010006084) #8	PMPCA (ENSBMSG00010006169) #9	INPP5E (ENSBMSG00010006192) #10	SEC16A (ENSBMSG00010006223) #11	NOTCH1 (ENSBMSG00010006271) #12	EGFL7 (ENSBMSG00010006311) #13	AGPAT2 (ENSBMSG00010006383) #14	DIPK1B (ENSBMSG00010006420) #15	LCN10 (ENSBMSG00010006474) #16	LCN6 (ENSBMSG00010006505) #17	ENSBMSG00010006543 ##17	LCN8 (ENSBMSG00010006591) ##17	TMEM141 (ENSBMSG00010006608) #20	CCDC183 (ENSBMSG00010006635) #21	RABL6 (ENSBMSG00010006683) #22	AJM1 (ENSBMSG00010006721) #23	PHPT1 (ENSBMSG00010006736) #24	MAMDC4 (ENSBMSG00010006817) #25	EDF1 (ENSBMSG00010006887) #26	TRAF2 (ENSBMSG00010006905) #27	FBXW5 (ENSBMSG00010006925) #28	ENSBMSG00010006946	ENSBMSG00010006972 ##17	PTGDS (ENSBMSG00010006983) #30	PAXX (ENSBMSG00010007022) #31	CLIC3 (ENSBMSG00010007038) #32	ENSBMSG00010007062	ENSBMSG00010007094	FUT7 (ENSBMSG00010007113) #33	NPDC1 (ENSBMSG00010007128) #34
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.a.a ##17	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.a.a ##17	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00940000169457	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
American bison	MODERN SPECIES	1659																ENSBBBG00000000867 #22
Bos	ANCESTRAL SPECIES	5	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.a.a ##17	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00940000169457	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.a.a ##17	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00940000169457	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35	ENSGT00390000008072 #36
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005030183	COL5A1 (ENSBIXG00005030246)	FCN1 (ENSBIXG00005030319)	OLFM1 (ENSBIXG00005001647)	PPP1R26 (ENSBIXG00005005225)	PIERCE1 (ENSBIXG00005029175)	MRPS2 (ENSBIXG00005001779)	ENSBIXG00005001789 ##17	LCN1 (ENSBIXG00005029156) ##17	ENSBIXG00005029150 #16	LCN6 (ENSBIXG00005029140) #17	LCN15 (ENSBIXG00005005181) ##17	LCN8 (ENSBIXG00005005172) ##17	ENSBIXG00005001903 ##17	ENSBIXG00005029089 #20	RABL6 (ENSBIXG00005001957) #22	AJM1 (ENSBIXG00005005128) #23	PHPT1 (ENSBIXG00005029030) #24	EDF1 (ENSBIXG00005005090) #26	TRAF2 (ENSBIXG00005005083) #27	FBXW5 (ENSBIXG00005005055) #28	ENSBIXG00005005030	ENSBIXG00005028821 ##17	PTGDS (ENSBIXG00005028691) #30	ENSBIXG00005028678	PAXX (ENSBIXG00005028665) #31	CLIC3 (ENSBIXG00005002415) #32	FUT7 (ENSBIXG00005006621) #33	NPDC1 (ENSBIXG00005027511) #34	ENTPD2 (ENSBIXG00005027498) #35	ENSBIXG00005027468 #36
Cow	MODERN SPECIES	2	COL5A1 (ENSBTAG00000047998)	FCN1 (ENSBTAG00000048155)	OLFM1 (ENSBTAG00000038584)	ENSBTAG00000052600	PPP1R26 (ENSBTAG00000030317)	PIERCE1 (ENSBTAG00000049410)	MRPS2 (ENSBTAG00000005688)	ENSBTAG00000009599 ##17	LCN10 (ENSBTAG00000016144) #16	ENSBTAG00000055064	LCN15 (ENSBTAG00000001206) ##17	LCN8 (ENSBTAG00000017005) ##17	ENSBTAG00000047297 ##17	TMEM141 (ENSBTAG00000013889) #20	CCDC183 (ENSBTAG00000000933) #21	RABL6 (ENSBTAG00000039573) #22	AJM1 (ENSBTAG00000039708) #23	PHPT1 (ENSBTAG00000050722) #24	EDF1 (ENSBTAG00000030302) #26	TRAF2 (ENSBTAG00000010497) #27	FBXW5 (ENSBTAG00000010515) #28	C8G (ENSBTAG00000052909)	LCN12 (ENSBTAG00000039531) ##17	PTGDS (ENSBTAG00000015074) #30	ENSBTAG00000030296 ##17	ENSBTAG00000049497	CLIC3 (ENSBTAG00000015085) #32	PAXX (ENSBTAG00000015081) #31	FUT7 (ENSBTAG00000046516) #33	NPDC1 (ENSBTAG00000046140) #34	ENTPD2 (ENSBTAG00000048125) #35
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.a.a ##17	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT00950000183536	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00940000162046 #25	ENSGT00390000002738.a #24	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00940000169457	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35
Domestic yak	MODERN SPECIES	28	FCN1 (ENSBGRG00000006153)	OLFM1 (ENSBGRG00000006355)	PPP1R26 (ENSBGRG00000006507)	PIERCE1 (ENSBGRG00000006538)	MRPS2 (ENSBGRG00000006574)	ENSBGRG00000006588 ##17	ENSBGRG00000006614 ##17	ENSBGRG00000006653	ENSBGRG00000006671	ENSBGRG00000006698	LCN15 (ENSBGRG00000006707) ##17	LCN8 (ENSBGRG00000006734) ##17	ENSBGRG00000006788 ##17	ENSBGRG00000006839 #20	CCDC183 (ENSBGRG00000006886) #21	RABL6 (ENSBGRG00000006950) #22	AJM1 (ENSBGRG00000007013) #23	PHPT1 (ENSBGRG00000007028) #24	EDF1 (ENSBGRG00000007569) #26	TRAF2 (ENSBGRG00000007742) #27	FBXW5 (ENSBGRG00000007884) #28	ENSBGRG00000007955	LCN12 (ENSBGRG00000008098) ##17	ENSBGRG00000008193 #30	ENSBGRG00000008335 ##17	PAXX (ENSBGRG00000008372) #31	FUT7 (ENSBGRG00000008735) #33	NPDC1 (ENSBGRG00000008757) #34	ENTPD2 (ENSBGRG00000008803) #35	SAPCD2 (ENSBGRG00000009015) #36	UAP1L1 (ENSBGRG00000009106) #37
Wild yak	MODERN SPECIES	50						PIERCE1 (ENSBMUG00000001910)	MRPS2 (ENSBMUG00000001899)	LCN1 (ENSBMUG00000001882) ##17	LCN10 (ENSBMUG00000001866) #16	ENSBMUG00000001825	LCN15 (ENSBMUG00000001806) ##17	LCN8 (ENSBMUG00000001792) ##17	ENSBMUG00000001770 ##17	TMEM141 (ENSBMUG00000001756) #20	CCDC183 (ENSBMUG00000001715) #21	ENSBMUG00000001672 #22	ENSBMUG00000001667 #23	MAMDC4 (ENSBMUG00000001559) #25	ENSBMUG00000001079 #27	ENSBMUG00000001056 #27	ENSBMUG00000001035 #28	ENSBMUG00000001029	ENSBMUG00000000999 ##17	ENSBMUG00000000978 #30	ENSBMUG00000000967 ##17	PAXX (ENSBMUG00000000963) #31	ABCA2 (ENSBMUG00000000882)	FUT7 (ENSBMUG00000000680) #33	NPDC1 (ENSBMUG00000000669) #34	ENTPD2 (ENSBMUG00000000655) #35	ENSBMUG00000000603 #36
Caprinae	ANCESTRAL SPECIES	27	ENSGT00940000159211.C	ENSGT00940000157531	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.b.a.a ##17	ENSGT00940000153116.D #20	ENSGT00940000153116.C.a ##20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00940000162046 #25	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00730000111276 #28	ENSGT00440000034309 #29	ENSGT01050000244868.b.b ##17	ENSGT01100000263580 #30	ENSGT01050000244868.a.a.b.a.a ##17	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000158560	ENSGT00940000161618 #33	ENSGT00440000038604 #34
Rambouillet Sheep	MODERN SPECIES	19	COL5A1 (ENSOARG00020001060)	OLFM1 (ENSOARG00020000901)	PPP1R26 (ENSOARG00020000883)	PIERCE1 (ENSOARG00020000864)	ENSOARG00020000853	LCN1 (ENSOARG00020000827) ##17	ENSOARG00020000779 #16	LCN6 (ENSOARG00020000739) #17	LCN15 (ENSOARG00020000723) ##17	ENSOARG00020000706 ##17	LCN8 (ENSOARG00020000685) ##17	ENSOARG00020000659 #20	ENSOARG00020000565 ##20	ENSOARG00020000539 #20	CCDC183 (ENSOARG00020000506) #21	RABL6 (ENSOARG00020000476) #22	AJM1 (ENSOARG00020000463) #23	PHPT1 (ENSOARG00020000451) #24	EDF1 (ENSOARG00020000401) #26	TRAF2 (ENSOARG00020000385) #27	FBXW5 (ENSOARG00020000375) #28	C8G (ENSOARG00020000344) #29	ENSOARG00020000295 ##17	PTGDS (ENSOARG00020000264) #30	ENSOARG00020000226 ##17	PAXX (ENSOARG00020000208) #31	CLIC3 (ENSOARG00020025212) #32	ENSOARG00020025152	FUT7 (ENSOARG00020025139) #33	NPDC1 (ENSOARG00020025118) #34	ENTPD2 (ENSOARG00020025101) #35
Goat	MODERN SPECIES	2	ARRDC1 (ENSCHIG00000025586)	EHMT1 (ENSCHIG00000010516)	CACNA1B (ENSCHIG00000005457)	ENSCHIG00000024110	FCN1 (ENSCHIG00000013114)	OLFM1 (ENSCHIG00000011459)	PIERCE1 (ENSCHIG00000015336)	MRPS2 (ENSCHIG00000020569)	ENSCHIG00000019444 ##17	LCN6 (ENSCHIG00000009093) #17	LCN15 (ENSCHIG00000018845) ##17	LCN8 (ENSCHIG00000006201) ##17	ENSCHIG00000027059 ##17	TMEM141 (ENSCHIG00000024317) #20	CCDC183 (ENSCHIG00000020101) #21	RABL6 (ENSCHIG00000026264) #22	ENSCHIG00000018540 #29	PTGDS (ENSCHIG00000006002) #30	PAXX (ENSCHIG00000007613) #31	CLIC3 (ENSCHIG00000000488) #32	WDR5 (ENSCHIG00000023578)	BRD3 (ENSCHIG00000007578)	VAV2 (ENSCHIG00000021915)	SARDH (ENSCHIG00000017015)	DBH (ENSCHIG00000015269)	FAM163B (ENSCHIG00000017935)	ADAMTSL2 (ENSCHIG00000010630)	MYMK (ENSCHIG00000025700)	SLC2A6 (ENSCHIG00000022381)	CACFD1 (ENSCHIG00000022694)	ADAMTS13 (ENSCHIG00000025823)
Siberian musk deer	MODERN SPECIES	1178	RXRA (ENSMMSG00000018177)	COL5A1 (ENSMMSG00000018225)	ENSMMSG00000018412	OLFM1 (ENSMMSG00000018502)	PPP1R26 (ENSMMSG00000018550)	ENSMMSG00000018559	MRPS2 (ENSMMSG00000018589)	ENSMMSG00000018624 ##17	ENSMMSG00000018670 #16	LCN6 (ENSMMSG00000018819) #17	LCN15 (ENSMMSG00000018840) ##17	LCN8 (ENSMMSG00000018881) ##17	ENSMMSG00000018930 ##17	TMEM141 (ENSMMSG00000018971) #20	CCDC183 (ENSMMSG00000019000) #21	RABL6 (ENSMMSG00000019105) #22	AJM1 (ENSMMSG00000019146) #23	PHPT1 (ENSMMSG00000019163) #24	ENSMMSG00000019468 #26	TRAF2 (ENSMMSG00000019552) #27	FBXW5 (ENSMMSG00000019608) #28	C8G (ENSMMSG00000019647) #29	LCN12 (ENSMMSG00000019684) ##17
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	2	ENSCHYG00000007951	ENSCHYG00000007748	ENSCHYG00000006934	ENSCHYG00000006777	ENSCHYG00000006745	ENSCHYG00000006717	ENSCHYG00000006685	ENSCHYG00000006617 ##17	ENSCHYG00000006580 #16	ENSCHYG00000006533 #17	ENSCHYG00000006519 ##17	ENSCHYG00000006487 ##17	ENSCHYG00000006453 ##17	ENSCHYG00000006412 #20	ENSCHYG00000006361 #21	ENSCHYG00000006293 #22	ENSCHYG00000021565 #23	ENSCHYG00000021520 #24	ENSCHYG00000020912 #26	ENSCHYG00000020665 #27	ENSCHYG00000020519 #28	ENSCHYG00000020201	ENSCHYG00000020088 ##17	ENSCHYG00000020041 #30	ENSCHYG00000019947 #31	ENSCHYG00000019872 #32	ENSCHYG00000019701	ENSCHYG00000019619	ENSCHYG00000019549	ENSCHYG00000019369 #35	ENSCHYG00000019336
Yarkand deer	MODERN SPECIES	2	ENSCHYG00000019929	ENSCHYG00000019826	ENSCHYG00000019748	ENSCHYG00000019733	ENSCHYG00000019699	ENSCHYG00000019660	ENSCHYG00000019625	ENSCHYG00000019557 ##17	ENSCHYG00000019211 #16	ENSCHYG00000019128 #17	ENSCHYG00000018934 ##17	ENSCHYG00000018834 ##17	ENSCHYG00000018745 ##17	ENSCHYG00000018699 #20	ENSCHYG00000018311 #21	ENSCHYG00000018151 #22	ENSCHYG00000018107 #23	ENSCHYG00000018072 #24	ENSCHYG00000017539 #26	ENSCHYG00000017439 #27	ENSCHYG00000017343 #28	C8G (ENSCHYG00000017265) #29	ENSCHYG00000017133 ##17	ENSCHYG00000017000 #30	ENSCHYG00000016923 #31	ENSCHYG00000016848 #32	ENSCHYG00000016157 #35	ENSCHYG00000016005 #36	ENSCHYG00000015892 #37	ENSCHYG00000015656	ENSCHYG00000015336
Camelidae	ANCESTRAL SPECIES	65	ENSGT00940000153385.b.a.a	ENSGT00940000154143.e	ENSGT00940000159789	ENSGT00940000159211.C	ENSGT00940000156959.B	ENSGT00390000014118	ENSGT00940000154745.a	ENSGT00390000017382	ENSGT01050000244868.a.a.a.a.b ##17	ENSGT01050000244868.a.a.b.b.b.a #16	ENSGT01050000244868.a.a.b.b.b.b #17	ENSGT01050000244868.a.a.b.b.a.b ##17	ENSGT01050000244868.a.a.b.a.b ##17	ENSGT00940000153116.D #20	ENSGT00940000163544 #21	ENSGT00390000016002 #22	ENSGT00390000016543 #23	ENSGT00390000002738.a #24	ENSGT00390000008519 #26	ENSGT00940000156621 #27	ENSGT00440000034309 #29	ENSGT01100000263580 #30	ENSGT00390000000543 #31	ENSGT00940000161243 #32	ENSGT00940000161618 #33	ENSGT00440000038604 #34	ENSGT01100000263542.B.b #35	ENSGT00390000008072 #36	ENSGT00940000153464.A.a #37	ENSGT00940000159838	ENSGT00940000155422
Arabian camel	MODERN SPECIES	30	WDR5 (ENSCDRG00005022301)	RXRA (ENSCDRG00005022298)	ENSCDRG00005022297	ENSCDRG00005022296	OLFM1 (ENSCDRG00005022295)	PPP1R26 (ENSCDRG00005022294)	PIERCE1 (ENSCDRG00005022293)	ENSCDRG00005022292	LCN1 (ENSCDRG00005022291) ##17	LCN10 (ENSCDRG00005022290) #16	LCN6 (ENSCDRG00005022289) #17	LCN8 (ENSCDRG00005022287) ##17	LCN15 (ENSCDRG00005022286) ##17	TMEM141 (ENSCDRG00005022285) #20	CCDC183 (ENSCDRG00005022283) #21	RABL6 (ENSCDRG00005022282) #22	AJM1 (ENSCDRG00005022281) #23	PHPT1 (ENSCDRG00005022280) #24	EDF1 (ENSCDRG00005022278) #26	TRAF2 (ENSCDRG00005022277) #27	C8G (ENSCDRG00005022275) #29	ENSCDRG00005022274 #30	PAXX (ENSCDRG00005022271) #31	CLIC3 (ENSCDRG00005022270) #32	FUT7 (ENSCDRG00005022268) #33	NPDC1 (ENSCDRG00005022267) #34	ENTPD2 (ENSCDRG00005022266) #35	SAPCD2 (ENSCDRG00005022265) #36	UAP1L1 (ENSCDRG00005022264) #37	ENSCDRG00005022263	DPP7 (ENSCDRG00005022261)