Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00950000182866.D #22
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Tetrapoda	ANCESTRAL SPECIES	54	ENSGT00390000009562	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000175256	ENSGT00940000157670 #12	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743	ENSGT00950000182913.A.a
Amniota	ANCESTRAL SPECIES	29	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000175256	ENSGT00940000157670 #12	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000161758
Mammalia	ANCESTRAL SPECIES	29	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743	ENSGT00900000143181	ENSGT00390000002752
Theria	DUPLICATION
Theria	ANCESTRAL SPECIES	15	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Eutheria	DUPLICATION
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Primates	ANCESTRAL SPECIES		ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000164522.c.b #9	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255.o #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c.a.a #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Cebidae	ANCESTRAL SPECIES		ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000164522.c.b #9	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255.o #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c.a.a #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000164522.c.b #9	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255.o #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c.a.a #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Capuchin	MODERN SPECIES	28	ANKK1 (ENSCCAG00000037007) #7	DRD2 (ENSCCAG00000019854) #8	ENSCCAG00000028022 #9	TMPRSS5 (ENSCCAG00000021473) #10	ZW10 (ENSCCAG00000020627) #11	ENSCCAG00000032064 #12	HTR3B (ENSCCAG00000035522) #13	HTR3A (ENSCCAG00000022462) #14	ZBTB16 (ENSCCAG00000001377) #15	NNMT (ENSCCAG00000019545) #16	C11orf71 (ENSCCAG00000033433) #17	RBM7 (ENSCCAG00000036534) #18	REXO2 (ENSCCAG00000034979) #19	NXPE1 (ENSCCAG00000032412) #20	NXPE4 (ENSCCAG00000027643) #21	NXPE2 (ENSCCAG00000016890) #22	CADM1 (ENSCCAG00000032479) #23	BUD13 (ENSCCAG00000024422) #24	ZPR1 (ENSCCAG00000028716) #25	APOA5 (ENSCCAG00000033034) #26	APOA4 (ENSCCAG00000026719) #27	APOC3 (ENSCCAG00000001237) #28	APOA1 (ENSCCAG00000024621) #29	ENSCCAG00000036119 #30	PAFAH1B2 (ENSCCAG00000034687) #31	SIDT2 (ENSCCAG00000027512) #32	ENSCCAG00000029473 #33	PCSK7 (ENSCCAG00000036429) #34	RNF214 (ENSCCAG00000037316) #35	BACE1 (ENSCCAG00000037820) #36	ENSCCAG00000025428 #37
Bolivian squirrel monkey	MODERN SPECIES	50	ANKK1 (ENSSBOG00000020263) #7	DRD2 (ENSSBOG00000004012) #8	ENSSBOG00000003976 #9	TMPRSS5 (ENSSBOG00000021869) #10	ZW10 (ENSSBOG00000006598) #11	USP28 (ENSSBOG00000028488) #12	HTR3B (ENSSBOG00000026069) #13	HTR3A (ENSSBOG00000018920) #14	ZBTB16 (ENSSBOG00000032604) #15	NNMT (ENSSBOG00000032617) #16	ENSSBOG00000030536	RBM7 (ENSSBOG00000027830) #18	REXO2 (ENSSBOG00000028651) #19	NXPE1 (ENSSBOG00000027065) #20	NXPE4 (ENSSBOG00000023862) #21	NXPE2 (ENSSBOG00000022260) #22	ENSSBOG00000034681	CADM1 (ENSSBOG00000035201) #23	ENSSBOG00000034680	BUD13 (ENSSBOG00000033988) #24	ZPR1 (ENSSBOG00000018045) #25	APOA5 (ENSSBOG00000034615) #26	APOA4 (ENSSBOG00000034589) #27	APOC3 (ENSSBOG00000029645) #28	APOA1 (ENSSBOG00000027691) #29	ENSSBOG00000019734	SIK3 (ENSSBOG00000033875) #30	ENSSBOG00000018305	ENSSBOG00000031628	ENSSBOG00000028394	PAFAH1B2 (ENSSBOG00000031801) #31
Marmoset	MODERN SPECIES	2	ENSCJAG00000080815	ENSCJAG00000051295	TMPRSS5 (ENSCJAG00000012228) #10	ZW10 (ENSCJAG00000012168) #11	USP28 (ENSCJAG00000012053) #12	HTR3B (ENSCJAG00000012037) #13	HTR3A (ENSCJAG00000012009) #14	ZBTB16 (ENSCJAG00000011978) #15	NNMT (ENSCJAG00000011964) #16	C11orf71 (ENSCJAG00000011958) #17	RBM7 (ENSCJAG00000011949) #18	ENSCJAG00000084583	REXO2 (ENSCJAG00000012434) #19	ENSCJAG00000069594	NXPE1 (ENSCJAG00000045094) #20	NXPE2 (ENSCJAG00000012491) #22	CADM1 (ENSCJAG00000012501) #23	BUD13 (ENSCJAG00000012570) #24	ZPR1 (ENSCJAG00000012583) #25	APOA5 (ENSCJAG00000012611) #26	APOA4 (ENSCJAG00000070367) #27	APOC3 (ENSCJAG00000012639) #28	APOA1 (ENSCJAG00000012644) #29	SIK3 (ENSCJAG00000012659) #30	ENSCJAG00000074301	PAFAH1B2 (ENSCJAG00000012698) #31	SIDT2 (ENSCJAG00000012713) #32	TAGLN (ENSCJAG00000012755) #33	PCSK7 (ENSCJAG00000012763) #34	RNF214 (ENSCJAG00000012793) #35	BACE1 (ENSCJAG00000012845) #36
Mas night monkey	MODERN SPECIES	527	TTC12 (ENSANAG00000035548)	ANKK1 (ENSANAG00000029122) #7	DRD2 (ENSANAG00000031378) #8	ENSANAG00000028923 #9	TMPRSS5 (ENSANAG00000022545) #10	ZW10 (ENSANAG00000033796) #11	USP28 (ENSANAG00000024006) #12	HTR3B (ENSANAG00000025924) #13	HTR3A (ENSANAG00000016907) #14	ZBTB16 (ENSANAG00000029870) #15	NNMT (ENSANAG00000032401) #16	C11orf71 (ENSANAG00000034041) #17	ENSANAG00000031879 #18	ENSANAG00000020834 #19	NXPE1 (ENSANAG00000023027) #20	NXPE2 (ENSANAG00000022914) #22	ENSANAG00000006922	CADM1 (ENSANAG00000022822) #23	BUD13 (ENSANAG00000035220) #24	ZPR1 (ENSANAG00000026351) #25	APOA5 (ENSANAG00000030524) #26	APOA4 (ENSANAG00000033961) #27	APOC3 (ENSANAG00000033515) #28	APOA1 (ENSANAG00000034411) #29	SIK3 (ENSANAG00000037756) #30	ENSANAG00000025519	ENSANAG00000035938	PAFAH1B2 (ENSANAG00000023275) #31	SIDT2 (ENSANAG00000031713) #32	ENSANAG00000038268 #33	PCSK7 (ENSANAG00000035257) #34
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00910000146918 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00870000136493.d.g.b #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00910000146918 #37
Gorilla	MODERN SPECIES	2	DRD2 (ENSGGOG00000003244) #8	TMPRSS5 (ENSGGOG00000026807) #10	ZW10 (ENSGGOG00000015283) #11	ENSGGOG00000027059	USP28 (ENSGGOG00000005119) #12	HTR3B (ENSGGOG00000005084) #13	HTR3A (ENSGGOG00000014709) #14	ZBTB16 (ENSGGOG00000000319) #15	NNMT (ENSGGOG00000003749) #16	ENSGGOG00000009932 #17	ENSGGOG00000038884	ENSGGOG00000009941 #18	REXO2 (ENSGGOG00000023267) #19	NXPE1 (ENSGGOG00000024286) #20	NXPE4 (ENSGGOG00000008842) #21	ENSGGOG00000010022 #22	CADM1 (ENSGGOG00000010219) #23	BUD13 (ENSGGOG00000000662) #24	ZPR1 (ENSGGOG00000000664) #25	APOA5 (ENSGGOG00000000666) #26	APOA4 (ENSGGOG00000028447) #27	APOC3 (ENSGGOG00000008004) #28	APOA1 (ENSGGOG00000008006) #29	SIK3 (ENSGGOG00000011085) #30	PAFAH1B2 (ENSGGOG00000037923) #31	SIDT2 (ENSGGOG00000014318) #32	TAGLN (ENSGGOG00000014333) #33	PCSK7 (ENSGGOG00000014344) #34	RNF214 (ENSGGOG00000014362) #35	BACE1 (ENSGGOG00000014376) #36	CEP164 (ENSGGOG00000006445)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00870000136493.d.g.b #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00910000146918 #37
Pan	ANCESTRAL SPECIES	1	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00530000063801.a.m.b.a	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00870000136493.d.g.b #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00910000148725	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259.e #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Chimpanzee	MODERN SPECIES	2	TMPRSS5 (ENSPTRG00000049624) #10	ZW10 (ENSPTRG00000004297) #11	CLDN25 (ENSPTRG00000041604)	ENSPTRG00000050654	USP28 (ENSPTRG00000004299) #12	HTR3B (ENSPTRG00000004300) #13	HTR3A (ENSPTRG00000004301) #14	ZBTB16 (ENSPTRG00000004302) #15	NNMT (ENSPTRG00000004303) #16	C11H11orf71 (ENSPTRG00000004304) #17	ENSPTRG00000044509	RBM7 (ENSPTRG00000004305) #18	REXO2 (ENSPTRG00000004306) #19	NXPE1 (ENSPTRG00000004307) #20	NXPE4 (ENSPTRG00000004308) #21	NXPE2 (ENSPTRG00000028394) #22	CADM1 (ENSPTRG00000004310) #23	ENSPTRG00000051389	BUD13 (ENSPTRG00000004311) #24	ZPR1 (ENSPTRG00000004312) #25	APOA5 (ENSPTRG00000004313) #26	APOA4 (ENSPTRG00000004314) #27	APOC3 (ENSPTRG00000004315) #28	APOA1 (ENSPTRG00000004316) #29	SIK3 (ENSPTRG00000004317) #30	PAFAH1B2 (ENSPTRG00000004318) #31	SIDT2 (ENSPTRG00000004319) #32	TAGLN (ENSPTRG00000004320) #33	PCSK7 (ENSPTRG00000004321) #34	RNF214 (ENSPTRG00000004323) #35	BACE1 (ENSPTRG00000004324) #36
Bonobo	MODERN SPECIES	2	TMPRSS5 (ENSPPAG00000038681) #10	ZW10 (ENSPPAG00000031453) #11	CLDN25 (ENSPPAG00000007965)	ENSPPAG00000029813	USP28 (ENSPPAG00000042077) #12	HTR3B (ENSPPAG00000027697) #13	HTR3A (ENSPPAG00000023311) #14	ZBTB16 (ENSPPAG00000034578) #15	NNMT (ENSPPAG00000029095) #16	ENSPPAG00000027006 #17	ENSPPAG00000038521	RBM7 (ENSPPAG00000027572) #18	REXO2 (ENSPPAG00000039849) #19	NXPE1 (ENSPPAG00000039026) #20	ENSPPAG00000036856 #21	NXPE2 (ENSPPAG00000028189) #22	CADM1 (ENSPPAG00000036227) #23	ENSPPAG00000029893	BUD13 (ENSPPAG00000040801) #24	ZPR1 (ENSPPAG00000035589) #25	APOA5 (ENSPPAG00000040538) #26	APOA4 (ENSPPAG00000037193) #27	APOC3 (ENSPPAG00000016679) #28	APOA1 (ENSPPAG00000026972) #29	SIK3 (ENSPPAG00000036163) #30	PAFAH1B2 (ENSPPAG00000027377) #31	SIDT2 (ENSPPAG00000029761) #32	TAGLN (ENSPPAG00000041234) #33	PCSK7 (ENSPPAG00000039272) #34	RNF214 (ENSPPAG00000041137) #35	BACE1 (ENSPPAG00000037875) #36
Human	MODERN SPECIES	2	ANKK1 (ENSG00000170209) #7	DRD2 (ENSG00000149295) #8	TMPRSS5 (ENSG00000166682) #10	ZW10 (ENSG00000086827) #11	CLDN25 (ENSG00000228607)	USP28 (ENSG00000048028) #12	HTR3B (ENSG00000149305) #13	HTR3A (ENSG00000166736) #14	ZBTB16 (ENSG00000109906) #15	NNMT (ENSG00000166741) #16	C11orf71 (ENSG00000180425) #17	RBM7 (ENSG00000076053) #18	REXO2 (ENSG00000076043) #19	NXPE1 (ENSG00000095110) #20	NXPE4 (ENSG00000137634) #21	NXPE2 (ENSG00000204361) #22	CADM1 (ENSG00000182985) #23	BUD13 (ENSG00000137656) #24	ZPR1 (ENSG00000109917) #25	APOA5 (ENSG00000110243) #26	APOA4 (ENSG00000110244) #27	APOC3 (ENSG00000110245) #28	APOA1 (ENSG00000118137) #29	SIK3 (ENSG00000160584) #30	PAFAH1B2 (ENSG00000168092) #31	SIDT2 (ENSG00000149577) #32	TAGLN (ENSG00000149591) #33	PCSK7 (ENSG00000160613) #34	RNF214 (ENSG00000167257) #35	BACE1 (ENSG00000186318) #36	CEP164 (ENSG00000110274)
Orangutan	MODERN SPECIES	2	TTC12 (ENSPPYG00000003884)	ANKK1 (ENSPPYG00000032703) #7	DRD2 (ENSPPYG00000003885) #8	TMPRSS5 (ENSPPYG00000003886) #10	ZW10 (ENSPPYG00000003887) #11	USP28 (ENSPPYG00000003888) #12	HTR3B (ENSPPYG00000003889) #13	HTR3A (ENSPPYG00000003890) #14	ZBTB16 (ENSPPYG00000003891) #15	NNMT (ENSPPYG00000003892) #16	ENSPPYG00000003893 #17	RBM7 (ENSPPYG00000003894) #18	REXO2 (ENSPPYG00000003895) #19	NXPE1 (ENSPPYG00000003896) #20	NXPE4 (ENSPPYG00000003897) #21	NXPE2 (ENSPPYG00000003898) #22	CADM1 (ENSPPYG00000003899) #23	BUD13 (ENSPPYG00000003900) #24	ZPR1 (ENSPPYG00000025914) #25	APOA5 (ENSPPYG00000031421) #26	APOA4 (ENSPPYG00000003902) #27	ENSPPYG00000003903 #28	APOA1 (ENSPPYG00000003904) #29	SIK3 (ENSPPYG00000003905) #30	PAFAH1B2 (ENSPPYG00000003907) #31	SIDT2 (ENSPPYG00000003908) #32	PCSK7 (ENSPPYG00000003910) #34	TAGLN (ENSPPYG00000003909) #33	RNF214 (ENSPPYG00000003911) #35	BACE1 (ENSPPYG00000003912) #36	CEP164 (ENSPPYG00000003914)
Gibbon	MODERN SPECIES	5	ANKK1 (ENSNLEG00000007308) #7	DRD2 (ENSNLEG00000007309) #8	TMPRSS5 (ENSNLEG00000007310) #10	ZW10 (ENSNLEG00000032579) #11	CLDN25 (ENSNLEG00000007312)	USP28 (ENSNLEG00000007313) #12	HTR3B (ENSNLEG00000007316) #13	HTR3A (ENSNLEG00000007317) #14	ZBTB16 (ENSNLEG00000007319) #15	NNMT (ENSNLEG00000007321) #16	ENSNLEG00000029308 #17	RBM7 (ENSNLEG00000029494) #18	REXO2 (ENSNLEG00000029745) #19	NXPE1 (ENSNLEG00000007325) #20	NXPE4 (ENSNLEG00000007326) #21	NXPE2 (ENSNLEG00000007327) #22	CADM1 (ENSNLEG00000029493) #23	BUD13 (ENSNLEG00000007329) #24	ZPR1 (ENSNLEG00000007330) #25	APOA5 (ENSNLEG00000007331) #26	APOA4 (ENSNLEG00000007332) #27	APOC3 (ENSNLEG00000007334) #28	APOA1 (ENSNLEG00000007335) #29	SIK3 (ENSNLEG00000007336) #30	PAFAH1B2 (ENSNLEG00000032420) #31	SIDT2 (ENSNLEG00000007338) #32	TAGLN (ENSNLEG00000007339) #33	PCSK7 (ENSNLEG00000007340) #34	RNF214 (ENSNLEG00000007341) #35	ENSNLEG00000032623 #37	BACE1 (ENSNLEG00000007342) #36
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Cercopithecinae_d	ANCESTRAL SPECIES	45	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23
Sooty mangabey	MODERN SPECIES	138	ANKK1 (ENSCATG00000021625) #7	DRD2 (ENSCATG00000040093) #8	TMPRSS5 (ENSCATG00000039143) #10	ZW10 (ENSCATG00000029954) #11	USP28 (ENSCATG00000031506) #12	HTR3B (ENSCATG00000044851) #13	HTR3A (ENSCATG00000034214) #14	ZBTB16 (ENSCATG00000039272) #15	NNMT (ENSCATG00000034839) #16	ENSCATG00000020795	C11orf71 (ENSCATG00000040083) #17	RBM7 (ENSCATG00000037361) #18	REXO2 (ENSCATG00000015278) #19	NXPE1 (ENSCATG00000044822) #20	NXPE4 (ENSCATG00000033776) #21	NXPE2 (ENSCATG00000011895) #22	CADM1 (ENSCATG00000034424) #23
Drill	MODERN SPECIES	621	TTC12 (ENSMLEG00000038689)	ANKK1 (ENSMLEG00000030592) #7	DRD2 (ENSMLEG00000044244) #8	ENSMLEG00000035644 #10	ZW10 (ENSMLEG00000031557) #11	USP28 (ENSMLEG00000020953) #12	HTR3B (ENSMLEG00000041346) #13	HTR3A (ENSMLEG00000038776) #14	ZBTB16 (ENSMLEG00000027152) #15	NNMT (ENSMLEG00000040550) #16	C11orf71 (ENSMLEG00000042004) #17	RBM7 (ENSMLEG00000041953) #18	REXO2 (ENSMLEG00000036571) #19	NXPE1 (ENSMLEG00000032297) #20	NXPE4 (ENSMLEG00000044166) #21	NXPE2 (ENSMLEG00000000534) #22	CADM1 (ENSMLEG00000033608) #23	ENSMLEG00000004443
Olive baboon	MODERN SPECIES	3	PLET1 (ENSPANG00000006432)	NCAM1 (ENSPANG00000016065)	TTC12 (ENSPANG00000010676)	DRD2 (ENSPANG00000005708) #8	TMPRSS5 (ENSPANG00000007319) #10	ZW10 (ENSPANG00000019266) #11	USP28 (ENSPANG00000019172) #12	HTR3B (ENSPANG00000007181) #13	HTR3A (ENSPANG00000014346) #14	ZBTB16 (ENSPANG00000005924) #15	NNMT (ENSPANG00000013188) #16	C11orf71 (ENSPANG00000008843) #17	RBM7 (ENSPANG00000009431) #18	REXO2 (ENSPANG00000010675) #19	NXPE4 (ENSPANG00000005599) #21	NXPE2 (ENSPANG00000004639) #22	CADM1 (ENSPANG00000015042) #23	ENSPANG00000049158	ENSPANG00000043017	BUD13 (ENSPANG00000006431) #24	ENSPANG00000038163	APOA4 (ENSPANG00000003384) #27	APOC3 (ENSPANG00000008369) #28	APOA1 (ENSPANG00000008368) #29	SIK3 (ENSPANG00000019733) #30	PAFAH1B2 (ENSPANG00000015041) #31	SIDT2 (ENSPANG00000018905) #32	TAGLN (ENSPANG00000002535) #33	PCSK7 (ENSPANG00000000210) #34	RNF214 (ENSPANG00000010747) #35	BACE1 (ENSPANG00000013147) #36
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Pig-tailed macaque	MODERN SPECIES	537									ZBTB16 (ENSMNEG00000037837) #15	NNMT (ENSMNEG00000036692) #16	ENSMNEG00000028371	C11orf71 (ENSMNEG00000037393) #17	RBM7 (ENSMNEG00000005397) #18	REXO2 (ENSMNEG00000033379) #19	NXPE1 (ENSMNEG00000028820) #20	NXPE2 (ENSMNEG00000039026) #22	CADM1 (ENSMNEG00000043391) #23	BUD13 (ENSMNEG00000039484) #24	ZPR1 (ENSMNEG00000032911) #25	APOA5 (ENSMNEG00000041189) #26	APOA4 (ENSMNEG00000038703) #27	APOC3 (ENSMNEG00000044814) #28	APOA1 (ENSMNEG00000040977) #29	SIK3 (ENSMNEG00000036838) #30	PAFAH1B2 (ENSMNEG00000042408) #31	SIDT2 (ENSMNEG00000032672) #32	TAGLN (ENSMNEG00000030425) #33	PCSK7 (ENSMNEG00000043226) #34	RNF214 (ENSMNEG00000044588) #35	ENSMNEG00000040272 #37	BACE1 (ENSMNEG00000043700) #36
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.a.a.a.a.b.b	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Rhesus	MODERN SPECIES	5	DRD2 (ENSMMUG00000014334) #8	TMPRSS5 (ENSMMUG00000030906) #10	ZW10 (ENSMMUG00000023772) #11	ENSMMUG00000043523	CLDN25 (ENSMMUG00000053754)	USP28 (ENSMMUG00000023773) #12	HTR3B (ENSMMUG00000007079) #13	HTR3A (ENSMMUG00000007080) #14	ZBTB16 (ENSMMUG00000007085) #15	NNMT (ENSMMUG00000007086) #16	ENSMMUG00000052205	C14H11orf71 (ENSMMUG00000051785) #17	RBM7 (ENSMMUG00000012270) #18	REXO2 (ENSMMUG00000012269) #19	NXPE1 (ENSMMUG00000012268) #21	NXPE2 (ENSMMUG00000030902) #22	CADM1 (ENSMMUG00000021628) #23	ENSMMUG00000050683	BUD13 (ENSMMUG00000020002) #24	ZPR1 (ENSMMUG00000053039) #25	APOA5 (ENSMMUG00000057425) #26	APOA4 (ENSMMUG00000016125) #27	ENSMMUG00000056610	ENSMMUG00000060987	APOA1 (ENSMMUG00000044545) #29	SIK3 (ENSMMUG00000016128) #30	PAFAH1B2 (ENSMMUG00000002050) #31	SIDT2 (ENSMMUG00000002053) #32	TAGLN (ENSMMUG00000002058) #33	PCSK7 (ENSMMUG00000002061) #34	RNF214 (ENSMMUG00000002067) #35
Crab-eating macaque	MODERN SPECIES	5	TTC12 (ENSMFAG00000001067)	DRD2 (ENSMFAG00000043416) #8	ZW10 (ENSMFAG00000005588) #11	USP28 (ENSMFAG00000042145) #12	HTR3B (ENSMFAG00000002022) #13	HTR3A (ENSMFAG00000044451) #14	ENSMFAG00000065596	ZBTB16 (ENSMFAG00000008415) #15	NNMT (ENSMFAG00000036328) #16	ENSMFAG00000050426	ENSMFAG00000048364	C11orf71 (ENSMFAG00000056584) #17	RBM7 (ENSMFAG00000000965) #18	REXO2 (ENSMFAG00000041155) #19	NXPE4 (ENSMFAG00000026064) #21	NXPE2 (ENSMFAG00000038999) #22	CADM1 (ENSMFAG00000040148) #23	ENSMFAG00000052640	BUD13 (ENSMFAG00000036204) #24	ZPR1 (ENSMFAG00000030506) #25	APOA5 (ENSMFAG00000038810) #26	ENSMFAG00000042160 #29	ENSMFAG00000001837	SIK3 (ENSMFAG00000041223) #30	ENSMFAG00000051964	ENSMFAG00000050007	SIDT2 (ENSMFAG00000032882) #32	TAGLN (ENSMFAG00000036871) #33	PCSK7 (ENSMFAG00000044470) #34	ENSMFAG00000049386	RNF214 (ENSMFAG00000034484) #35
Vervet Monkey	MODERN SPECIES		DRD2 (ENSCSAG00000002807) #8	TMPRSS5 (ENSCSAG00000002803) #10	ZW10 (ENSCSAG00000002794) #11	CLDN25 (ENSCSAG00000000597)	USP28 (ENSCSAG00000002785) #12	ENSCSAG00000002782	HTR3B (ENSCSAG00000002779) #13	HTR3A (ENSCSAG00000002771) #14	ZBTB16 (ENSCSAG00000002761) #15	NNMT (ENSCSAG00000002757) #16	C11orf71 (ENSCSAG00000000596) #17	RBM7 (ENSCSAG00000002756) #18	REXO2 (ENSCSAG00000002754) #19	NXPE1 (ENSCSAG00000002753) #20	NXPE4 (ENSCSAG00000002750) #21	NXPE2 (ENSCSAG00000002745) #22	CADM1 (ENSCSAG00000002740) #23	BUD13 (ENSCSAG00000002732) #24	ZPR1 (ENSCSAG00000002722) #25	APOA5 (ENSCSAG00000002717) #26	APOA4 (ENSCSAG00000002712) #27	APOC3 (ENSCSAG00000002711) #28	APOA1 (ENSCSAG00000002709) #29	SIK3 (ENSCSAG00000002703) #30	PAFAH1B2 (ENSCSAG00000002695) #31	SIDT2 (ENSCSAG00000002692) #32	TAGLN (ENSCSAG00000002690) #33	PCSK7 (ENSCSAG00000002686) #34	RNF214 (ENSCSAG00000002685) #35	BACE1 (ENSCSAG00000002684) #36	CEP164 (ENSCSAG00000002683)
Rhinopithecus	ANCESTRAL SPECIES	30	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306.u #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a.c #31	ENSGT00390000010091.c #32	ENSGT00940000155162.c #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00910000146918 #37	ENSGT00940000157786 #36
Golden snub-nosed monkey	MODERN SPECIES	1668			TMPRSS5 (ENSRROG00000039822) #10	ZW10 (ENSRROG00000031796) #11	ENSRROG00000038644	USP28 (ENSRROG00000026490) #12	HTR3B (ENSRROG00000031365) #13	HTR3A (ENSRROG00000035619) #14	ZBTB16 (ENSRROG00000036987) #15	NNMT (ENSRROG00000036650) #16	C11orf71 (ENSRROG00000007675) #17	RBM7 (ENSRROG00000032280) #18	REXO2 (ENSRROG00000038928) #19	NXPE1 (ENSRROG00000044244) #20	NXPE4 (ENSRROG00000042339) #21	NXPE2 (ENSRROG00000040744) #22
Black snub-nosed monkey	MODERN SPECIES	722	TTC12 (ENSRBIG00000043217)	ANKK1 (ENSRBIG00000028582) #7	DRD2 (ENSRBIG00000027761) #8	TMPRSS5 (ENSRBIG00000031311) #10	ZW10 (ENSRBIG00000030358) #11	USP28 (ENSRBIG00000044717) #12	HTR3B (ENSRBIG00000044677) #13	HTR3A (ENSRBIG00000033910) #14	ZBTB16 (ENSRBIG00000035195) #15	NNMT (ENSRBIG00000041263) #16	C11orf71 (ENSRBIG00000019664) #17	RBM7 (ENSRBIG00000044762) #18	REXO2 (ENSRBIG00000037809) #19	NXPE1 (ENSRBIG00000039952) #20	NXPE4 (ENSRBIG00000026591) #21	NXPE2 (ENSRBIG00000038016) #22	CADM1 (ENSRBIG00000038512) #23	BUD13 (ENSRBIG00000001857) #24	ZPR1 (ENSRBIG00000041749) #25	APOA5 (ENSRBIG00000031722) #26	APOA4 (ENSRBIG00000027521) #27	APOC3 (ENSRBIG00000003998) #28	APOA1 (ENSRBIG00000044736) #29	SIK3 (ENSRBIG00000028314) #30	PAFAH1B2 (ENSRBIG00000035123) #31	SIDT2 (ENSRBIG00000042199) #32	TAGLN (ENSRBIG00000031507) #33	PCSK7 (ENSRBIG00000034987) #34	ENSRBIG00000029046 #35	ENSRBIG00000030215 #37	BACE1 (ENSRBIG00000032215) #36
Tarsier	MODERN SPECIES	4566														NXPE1 (ENSTSYG00000004695) #20	NXPE4 (ENSTSYG00000010973) #21	NXPE2 (ENSTSYG00000006186) #22
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Bushbaby	MODERN SPECIES	201	DRD2 (ENSOGAG00000006407) #8	ENSOGAG00000007401	TMPRSS5 (ENSOGAG00000026392) #10	ZW10 (ENSOGAG00000011584) #11	CLDN25 (ENSOGAG00000024445)	USP28 (ENSOGAG00000004313) #12	HTR3B (ENSOGAG00000004318) #13	HTR3A (ENSOGAG00000004319) #14	ZBTB16 (ENSOGAG00000033673) #15	NNMT (ENSOGAG00000031697) #16	C11orf71 (ENSOGAG00000016855) #17	RBM7 (ENSOGAG00000016857) #18	REXO2 (ENSOGAG00000016860) #19	NXPE1 (ENSOGAG00000013418) #20	NXPE4 (ENSOGAG00000013423) #21	NXPE2 (ENSOGAG00000013432) #22	CADM1 (ENSOGAG00000002041) #23	BUD13 (ENSOGAG00000009973) #24	ZPR1 (ENSOGAG00000009977) #25	APOA5 (ENSOGAG00000025290) #26	APOA4 (ENSOGAG00000029288) #27	APOC3 (ENSOGAG00000009983) #28	APOA1 (ENSOGAG00000026815) #29	SIK3 (ENSOGAG00000026497) #30
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Glires	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00390000014690	ENSGT00900000143181	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Rabbit	MODERN SPECIES		NCAM1 (ENSOCUG00000006190)	TTC12 (ENSOCUG00000011625)	DRD2 (ENSOCUG00000011657) #8	TMPRSS5 (ENSOCUG00000027156) #10	ZW10 (ENSOCUG00000007436) #11	CLDN25 (ENSOCUG00000025517)	USP28 (ENSOCUG00000007441) #12	HTR3B (ENSOCUG00000029643) #13	HTR3A (ENSOCUG00000007462) #14	ZBTB16 (ENSOCUG00000007470) #15	C11orf71 (ENSOCUG00000003339) #17	RBM7 (ENSOCUG00000003342) #18	REXO2 (ENSOCUG00000004274) #19	ENSOCUG00000001714 #20	ENSOCUG00000010311 #20	NXPE2 (ENSOCUG00000022316) #22	CADM1 (ENSOCUG00000000864) #23	ENSOCUG00000031805	BUD13 (ENSOCUG00000004615) #24	ZPR1 (ENSOCUG00000004619) #25	APOA5 (ENSOCUG00000004628) #26	ENSOCUG00000030723	APOA4 (ENSOCUG00000011233) #27	ENSOCUG00000027365 #28	APOA1 (ENSOCUG00000010728) #29	SIK3 (ENSOCUG00000011238) #30	PAFAH1B2 (ENSOCUG00000039266) #31	SIDT2 (ENSOCUG00000011955) #32	ENSOCUG00000011970 #33	PCSK7 (ENSOCUG00000011974) #34	RNF214 (ENSOCUG00000011993) #35
Pika	MODERN SPECIES	4587																NXPE2 (ENSOPRG00000011531) #22
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Kangaroo rat	MODERN SPECIES	329	Pts (ENSDORG00000013720)	Ncam1 (ENSDORG00000015038)	Ttc12 (ENSDORG00000013510)	Ankk1 (ENSDORG00000013515) #7	Drd2 (ENSDORG00000013516) #8	Tmprss5 (ENSDORG00000011412) #10	Zw10 (ENSDORG00000011414) #11	Usp28 (ENSDORG00000011419) #12	Htr3b (ENSDORG00000014039) #13	Htr3a (ENSDORG00000014030) #14	Zbtb16 (ENSDORG00000011901) #15	Nnmt (ENSDORG00000001312) #16	Rbm7 (ENSDORG00000029149) #18	Rexo2 (ENSDORG00000011255) #19	Nxpe4 (ENSDORG00000002930) #21	Nxpe2 (ENSDORG00000011862) #22	Cadm1 (ENSDORG00000007798) #23	Bud13 (ENSDORG00000012405) #24	Zpr1 (ENSDORG00000012404) #25	Apoa5 (ENSDORG00000012403) #26	Apoa4 (ENSDORG00000028525) #27	ENSDORG00000012402 #28	Apoa1 (ENSDORG00000012400) #29	Sik3 (ENSDORG00000015104) #30	Pafah1b2 (ENSDORG00000026379) #31	Sidt2 (ENSDORG00000011276) #32	Tagln (ENSDORG00000011278) #33	Pcsk7 (ENSDORG00000011279) #34	Rnf214 (ENSDORG00000013754) #35	Bace1 (ENSDORG00000013760) #36	Dscaml1 (ENSDORG00000010623)
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Muroidea	ANCESTRAL SPECIES	29	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Chinese hamster chok1gshd	MODERN SPECIES	284	Drd2 (ENSCGRG00001020389) #8	ENSCGRG00001012459	Tmprss5 (ENSCGRG00001023126) #10	Zw10 (ENSCGRG00001023701) #11	ENSCGRG00001000915	Usp28 (ENSCGRG00001023338) #12	Htr3b (ENSCGRG00001023267) #13	Htr3a (ENSCGRG00001002154) #14	Zbtb16 (ENSCGRG00001024806) #15	Nnmt (ENSCGRG00001013317) #16	Gm5617 (ENSCGRG00001001466) #17	Rbm7 (ENSCGRG00001019236) #18	ENSCGRG00001019814 #19	ENSCGRG00001022529 #20	Nxpe4 (ENSCGRG00001011592) #21	ENSCGRG00001013462 #22	Cadm1 (ENSCGRG00001023561) #23	ENSCGRG00001004852	Bud13 (ENSCGRG00001019626) #24	Zpr1 (ENSCGRG00001013967) #25	Apoa5 (ENSCGRG00001024502) #26	Apoa4 (ENSCGRG00001024960) #27	Apoc3 (ENSCGRG00001005242) #28	Apoa1 (ENSCGRG00001024204) #29	Sik3 (ENSCGRG00001003605) #30	ENSCGRG00001018542 #31	Sidt2 (ENSCGRG00001019094) #32	Tagln (ENSCGRG00001023407) #33	Pcsk7 (ENSCGRG00001003140) #34	Rnf214 (ENSCGRG00001022173) #35	Bace1 (ENSCGRG00001020465) #36
Golden Hamster	MODERN SPECIES	635	Plet1 (ENSMAUG00000011494)	ENSMAUG00000014097	Ncam1 (ENSMAUG00000021119)	Ttc12 (ENSMAUG00000013995)	Drd2 (ENSMAUG00000011091) #8	Tmprss5 (ENSMAUG00000022000) #10	Zw10 (ENSMAUG00000010543) #11	Usp28 (ENSMAUG00000008295) #12	Htr3b (ENSMAUG00000010708) #13	Htr3a (ENSMAUG00000010378) #14	Zbtb16 (ENSMAUG00000010982) #15	Nnmt (ENSMAUG00000018665) #16	ENSMAUG00000017938 #18	Rexo2 (ENSMAUG00000014576) #19	Nxpe4 (ENSMAUG00000020773) #21	ENSMAUG00000010705 #22	Cadm1 (ENSMAUG00000003636) #23	ENSMAUG00000021484	Bud13 (ENSMAUG00000008604) #24	Zpr1 (ENSMAUG00000014185) #25	Apoa5 (ENSMAUG00000021305) #26	Apoa4 (ENSMAUG00000018590) #27	ENSMAUG00000020016	Apoa1 (ENSMAUG00000018114) #29	Sik3 (ENSMAUG00000013720) #30	Pafah1b2 (ENSMAUG00000020507) #31	Sidt2 (ENSMAUG00000014540) #32	Tagln (ENSMAUG00000020924) #33	Pcsk7 (ENSMAUG00000016951) #34	ENSMAUG00000002432 #35	ENSMAUG00000003202 #36
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	13	Ncam1 (ENSMOCG00000020055)	Ttc12 (ENSMOCG00000018797)	DRD2 (ENSMOCG00000013394) #8	Tmprss5 (ENSMOCG00000019745) #10	Zw10 (ENSMOCG00000009519) #11	Usp28 (ENSMOCG00000017498) #12	Htr3b (ENSMOCG00000007763) #13	Htr3a (ENSMOCG00000017513) #14	ENSMOCG00000007442	Zbtb16 (ENSMOCG00000001402) #15	Nnmt (ENSMOCG00000020571) #16	Rbm7 (ENSMOCG00000009674) #18	Rexo2 (ENSMOCG00000009016) #19	Nxpe4 (ENSMOCG00000020704) #21	ENSMOCG00000009738 #22	ENSMOCG00000015214 #22	Cadm1 (ENSMOCG00000012493) #23	4931429L15Rik (ENSMOCG00000016196)	Bud13 (ENSMOCG00000020780) #24	Zpr1 (ENSMOCG00000015722) #25	Apoa5 (ENSMOCG00000012382) #26	Apoa4 (ENSMOCG00000008908) #27	ENSMOCG00000008019	Apoa1 (ENSMOCG00000017674) #29	Sik3 (ENSMOCG00000014581) #30	Pafah1b2 (ENSMOCG00000011370) #31	Sidt2 (ENSMOCG00000004336) #32	ENSMOCG00000014927 #33	Pcsk7 (ENSMOCG00000013874) #34	Rnf214 (ENSMOCG00000019713) #35	Bace1 (ENSMOCG00000011148) #36
Prairie vole	MODERN SPECIES	13	ENSMOCG00000002086	Ncam1 (ENSMOCG00000020055)	Ttc12 (ENSMOCG00000018797)	DRD2 (ENSMOCG00000013394) #8	Tmprss5 (ENSMOCG00000019745) #10	Zw10 (ENSMOCG00000009519) #11	Usp28 (ENSMOCG00000017498) #12	Htr3b (ENSMOCG00000007763) #13	Htr3a (ENSMOCG00000017513) #14	ENSMOCG00000007442	Zbtb16 (ENSMOCG00000001402) #15	Nnmt (ENSMOCG00000020571) #16	Rbm7 (ENSMOCG00000009674) #18	Rexo2 (ENSMOCG00000009016) #19	Nxpe4 (ENSMOCG00000020704) #21	ENSMOCG00000009738 #22	ENSMOCG00000015214 #22	Cadm1 (ENSMOCG00000012493) #23	4931429L15Rik (ENSMOCG00000016196)	Bud13 (ENSMOCG00000020780) #24	Zpr1 (ENSMOCG00000015722) #25	Apoa5 (ENSMOCG00000012382) #26	Apoa4 (ENSMOCG00000008908) #27	ENSMOCG00000008019	Apoa1 (ENSMOCG00000017674) #29	Sik3 (ENSMOCG00000014581) #30	Pafah1b2 (ENSMOCG00000011370) #31	Sidt2 (ENSMOCG00000004336) #32	ENSMOCG00000014927 #33	Pcsk7 (ENSMOCG00000013874) #34	Rnf214 (ENSMOCG00000019713) #35
Northern American deer mouse	MODERN SPECIES	20	Ankk1 (ENSPEMG00000011950) #7	Drd2 (ENSPEMG00000012651) #8	Tmprss5 (ENSPEMG00000020635) #10	Zw10 (ENSPEMG00000020641) #11	ENSPEMG00000025300	Usp28 (ENSPEMG00000007642) #12	Htr3b (ENSPEMG00000011245) #13	Htr3a (ENSPEMG00000011767) #14	Zbtb16 (ENSPEMG00000008489) #15	Nnmt (ENSPEMG00000010869) #16	Gm5617 (ENSPEMG00000027308) #17	ENSPEMG00000027574 #18	Rexo2 (ENSPEMG00000001421) #19	ENSPEMG00000028974 #20	Nxpe4 (ENSPEMG00000008500) #21	Nxpe2 (ENSPEMG00000013012) #22	Cadm1 (ENSPEMG00000001825) #23	ENSPEMG00000014812	4931429L15Rik (ENSPEMG00000013164)	Bud13 (ENSPEMG00000016113) #24	ENSPEMG00000010769 #25	Apoa5 (ENSPEMG00000008037) #26	ENSPEMG00000025005	Apoa4 (ENSPEMG00000015480) #27	Apoc3 (ENSPEMG00000011253) #28	Apoa1 (ENSPEMG00000011979) #29	Sik3 (ENSPEMG00000006295) #30	Pafah1b2 (ENSPEMG00000027983) #31	Sidt2 (ENSPEMG00000021149) #32	Tagln (ENSPEMG00000022640) #33	Pcsk7 (ENSPEMG00000020789) #34
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Mus	ANCESTRAL SPECIES	4	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000155539.a.a #8	ENSGT00860000135752	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000155539.a.a #8	ENSGT00860000135752	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Mouse	MODERN SPECIES	18	Rpl10-ps3 (ENSMUSG00000058443)	Ncam1 (ENSMUSG00000039542)	Ttc12 (ENSMUSG00000040219)	Ankk1 (ENSMUSG00000032257) #7	Drd2 (ENSMUSG00000032259) #8	Tmprss5 (ENSMUSG00000032268) #10	Zw10 (ENSMUSG00000032264) #11	Usp28 (ENSMUSG00000032267) #12	Htr3b (ENSMUSG00000008590) #13	Htr3a (ENSMUSG00000032269) #14	Zbtb16 (ENSMUSG00000066687) #15	Nnmt (ENSMUSG00000032271) #16	Gm5617 (ENSMUSG00000042293) #17	Rbm7 (ENSMUSG00000042396) #18	Rexo2 (ENSMUSG00000032026) #19	Nxpe2 (ENSMUSG00000032028) #22	Nxpe4 (ENSMUSG00000044229) #21	Cadm1 (ENSMUSG00000032076) #23	4931429L15Rik (ENSMUSG00000056617)	Bud13 (ENSMUSG00000032077) #24	Zpr1 (ENSMUSG00000032078) #25	Apoa5 (ENSMUSG00000032079) #26	Apoa4 (ENSMUSG00000032080) #27	Apoc3 (ENSMUSG00000032081) #28	Apoa1 (ENSMUSG00000032083) #29	Sik3 (ENSMUSG00000034135) #30	Pafah1b2 (ENSMUSG00000003131) #31	Sidt2 (ENSMUSG00000034908) #32	Tagln (ENSMUSG00000032085) #33	Pcsk7 (ENSMUSG00000035382) #34	Rnf214 (ENSMUSG00000042790) #35
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000155539.a.a #8	ENSGT00860000135752	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Steppe mouse	MODERN SPECIES	3372	Ankk1 (ENSMSIG00000013556) #7	Drd2 (ENSMSIG00000013494) #8	ENSMSIG00000013481	Tmprss5 (ENSMSIG00000013179) #10	Zw10 (ENSMSIG00000013094) #11	ENSMSIG00000013079	Usp28 (ENSMSIG00000012895) #12	Htr3b (ENSMSIG00000012863) #13	Htr3a (ENSMSIG00000012846) #14	Zbtb16 (ENSMSIG00000012819) #15	Nnmt (ENSMSIG00000012794) #16	Rbm7 (ENSMSIG00000012760) #18	Rexo2 (ENSMSIG00000012688) #19	ENSMSIG00000012577 #20	Nxpe4 (ENSMSIG00000012534) #21	Nxpe2 (ENSMSIG00000012518) #22	ENSMSIG00000012512	Cadm1 (ENSMSIG00000011500) #23	ENSMSIG00000011463	ENSMSIG00000011446	4931429L15Rik (ENSMSIG00000011321)	Bud13 (ENSMSIG00000011279) #24	Zpr1 (ENSMSIG00000011232) #25	Apoa5 (ENSMSIG00000011204) #26	ENSMSIG00000011188	Apoa4 (ENSMSIG00000011179) #27	Apoc3 (ENSMSIG00000011168) #28	ENSMSIG00000011165	Apoa1 (ENSMSIG00000011153) #29	Sik3 (ENSMSIG00000011054) #30	ENSMSIG00000011027 #31
spretus	MODERN SPECIES	18	Ttc12 (MGP_SPRETEiJ_G0033318)	Ankk1 (MGP_SPRETEiJ_G0033317) #7	Drd2 (MGP_SPRETEiJ_G0033316) #8	MGP_SPRETEiJ_G0033315	Tmprss5 (MGP_SPRETEiJ_G0033314) #10	Zw10 (MGP_SPRETEiJ_G0033313) #11	Usp28 (MGP_SPRETEiJ_G0033312) #12	Htr3b (MGP_SPRETEiJ_G0033311) #13	Htr3a (MGP_SPRETEiJ_G0033310) #14	Zbtb16 (MGP_SPRETEiJ_G0033309) #15	Nnmt (MGP_SPRETEiJ_G0033308) #16	Gm5617 (MGP_SPRETEiJ_G0033307) #17	Rbm7 (MGP_SPRETEiJ_G0033306) #18	Rexo2 (MGP_SPRETEiJ_G0033305) #19	Nxpe4 (MGP_SPRETEiJ_G0033304) #21	Nxpe2 (MGP_SPRETEiJ_G0033303) #22	Cadm1 (MGP_SPRETEiJ_G0033302) #23	MGP_SPRETEiJ_G0033301	4931429L15Rik (MGP_SPRETEiJ_G0033300)	Bud13 (MGP_SPRETEiJ_G0033299) #24	Zpr1 (MGP_SPRETEiJ_G0033298) #25	Apoa5 (MGP_SPRETEiJ_G0033297) #26	Apoa4 (MGP_SPRETEiJ_G0033296) #27	MGP_SPRETEiJ_G0033295 #28	Apoa1 (MGP_SPRETEiJ_G0033294) #29	Sik3 (MGP_SPRETEiJ_G0033293) #30	Pafah1b2 (MGP_SPRETEiJ_G0033292) #31	Sidt2 (MGP_SPRETEiJ_G0033291) #32	Tagln (MGP_SPRETEiJ_G0033290) #33	Pcsk7 (MGP_SPRETEiJ_G0033289) #34	Rnf214 (MGP_SPRETEiJ_G0033288) #35
Ryukyu mouse	MODERN SPECIES	18	Ankk1 (MGP_CAROLIEiJ_G0032178) #7	Drd2 (MGP_CAROLIEiJ_G0032177) #8	MGP_CAROLIEiJ_G0032176	Tmprss5 (MGP_CAROLIEiJ_G0032175) #10	Zw10 (MGP_CAROLIEiJ_G0032174) #11	Usp28 (MGP_CAROLIEiJ_G0032173) #12	Htr3b (MGP_CAROLIEiJ_G0032172) #13	Htr3a (MGP_CAROLIEiJ_G0032171) #14	Zbtb16 (MGP_CAROLIEiJ_G0032170) #15	Nnmt (MGP_CAROLIEiJ_G0032169) #16	Gm5617 (MGP_CAROLIEiJ_G0032168) #17	Rbm7 (MGP_CAROLIEiJ_G0032167) #18	Rexo2 (MGP_CAROLIEiJ_G0032166) #19	MGP_CAROLIEiJ_G0032165 #20	Nxpe4 (MGP_CAROLIEiJ_G0032164) #21	Nxpe2 (MGP_CAROLIEiJ_G0032163) #22	Cadm1 (MGP_CAROLIEiJ_G0032162) #23	4931429L15Rik (MGP_CAROLIEiJ_G0032161)	Bud13 (MGP_CAROLIEiJ_G0032160) #24	Zpr1 (MGP_CAROLIEiJ_G0032159) #25	Apoa5 (MGP_CAROLIEiJ_G0032158) #26	Apoa4 (MGP_CAROLIEiJ_G0032157) #27	Apoc3 (MGP_CAROLIEiJ_G0032156) #28	Apoa1 (MGP_CAROLIEiJ_G0032155) #29	Sik3 (MGP_CAROLIEiJ_G0032154) #30	Pafah1b2 (MGP_CAROLIEiJ_G0032153) #31	Sidt2 (MGP_CAROLIEiJ_G0032152) #32	Tagln (MGP_CAROLIEiJ_G0032151) #33	Pcsk7 (MGP_CAROLIEiJ_G0032150) #34	Rnf214 (MGP_CAROLIEiJ_G0032149) #35	Bace1 (MGP_CAROLIEiJ_G0032148) #36
Shrew mouse	MODERN SPECIES	1	Ncam1 (MGP_PahariEiJ_G0015048)	Ttc12 (MGP_PahariEiJ_G0015047)	MGP_PahariEiJ_G0015046 #7	Drd2 (MGP_PahariEiJ_G0015045) #8	MGP_PahariEiJ_G0015044	Tmprss5 (MGP_PahariEiJ_G0015043) #10	Zw10 (MGP_PahariEiJ_G0015042) #11	Usp28 (MGP_PahariEiJ_G0015041) #12	Htr3b (MGP_PahariEiJ_G0015040) #13	Htr3a (MGP_PahariEiJ_G0015039) #14	Zbtb16 (MGP_PahariEiJ_G0015038) #15	Nnmt (MGP_PahariEiJ_G0015037) #16	Gm5617 (MGP_PahariEiJ_G0015036) #17	Rbm7 (MGP_PahariEiJ_G0015035) #18	Rexo2 (MGP_PahariEiJ_G0015034) #19	Nxpe2 (MGP_PahariEiJ_G0015033) #22	Cadm1 (MGP_PahariEiJ_G0015032) #23	4931429L15Rik (MGP_PahariEiJ_G0015031)	MGP_PahariEiJ_G0015030	Zpr1 (MGP_PahariEiJ_G0015029) #25	Apoa5 (MGP_PahariEiJ_G0015028) #26	Apoa4 (MGP_PahariEiJ_G0015027) #27	Apoc3 (MGP_PahariEiJ_G0015026) #28	Apoa1 (MGP_PahariEiJ_G0015025) #29	Sik3 (MGP_PahariEiJ_G0015024) #30	MGP_PahariEiJ_G0015023 #31	Sidt2 (MGP_PahariEiJ_G0015022) #32	Tagln (MGP_PahariEiJ_G0015021) #33	MGP_PahariEiJ_G0015020 #34	Rnf214 (MGP_PahariEiJ_G0015019) #35	Bace1 (MGP_PahariEiJ_G0015018) #36
Rat	MODERN SPECIES	18	Ankk1 (ENSRNOG00000025037) #7	Drd2 (ENSRNOG00000008428) #8	Tmprss5 (ENSRNOG00000008058) #10	Zw10 (ENSRNOG00000054479) #11	Cldn25 (ENSRNOG00000057454)	Usp28 (ENSRNOG00000007325) #12	Htr3b (ENSRNOG00000006920) #13	Htr3a (ENSRNOG00000006595) #14	Zbtb16 (ENSRNOG00000029980) #15	Nnmt (ENSRNOG00000005930) #16	C8h11orf71 (ENSRNOG00000005918) #17	Rbm7 (ENSRNOG00000005710) #18	Rexo2 (ENSRNOG00000018939) #19	Nxpe1 (ENSRNOG00000027730) #20	Nxpe4 (ENSRNOG00000070472) #21	Nxpe2 (ENSRNOG00000027847) #22	Cadm1 (ENSRNOG00000018778) #23	AC135409.1 (ENSRNOG00000038864)	LOC500990 (ENSRNOG00000038867)	Bud13 (ENSRNOG00000018665) #24	Zpr1 (ENSRNOG00000018481) #25	Apoa5 (ENSRNOG00000018436) #26	AABR07073400.1 (ENSRNOG00000059084)	Apoa4 (ENSRNOG00000055909) #27	Apoc3 (ENSRNOG00000047503) #28	Apoa1 (ENSRNOG00000045679) #29	ENSRNOG00000064478	Sik3 (ENSRNOG00000045931) #30	ENSRNOG00000067804	Pafah1b2 (ENSRNOG00000057102) #31	Sidt2 (ENSRNOG00000017871) #32
Upper Galilee mountains blind mole rat	MODERN SPECIES	1556																Nxpe2 (ENSNGAG00000000466) #22	Cadm1 (ENSNGAG00000016838) #23	Bud13 (ENSNGAG00000015401) #24	Zpr1 (ENSNGAG00000017884) #25	Apoa5 (ENSNGAG00000018712) #26	Apoa4 (ENSNGAG00000018081) #27	Apoc3 (ENSNGAG00000020371) #28	Apoa1 (ENSNGAG00000019547) #29	ENSNGAG00000016074	ENSNGAG00000015826	Sik3 (ENSNGAG00000007065) #30	Pafah1b2 (ENSNGAG00000021011) #31	Sidt2 (ENSNGAG00000016257) #32	Tagln (ENSNGAG00000011945) #33	Pcsk7 (ENSNGAG00000000868) #34	Rnf214 (ENSNGAG00000015039) #35
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d.m.a #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.h.b #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Marmotini_b	ANCESTRAL SPECIES	43																ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Arctic ground squirrel	MODERN SPECIES	170																NXPE2 (ENSUPAG00010005136) #22	CADM1 (ENSUPAG00010005148) #23	BUD13 (ENSUPAG00010005609) #24	ZPR1 (ENSUPAG00010005632) #25	APOA5 (ENSUPAG00010005672) #26	APOA4 (ENSUPAG00010005691) #27	APOC3 (ENSUPAG00010005696) #28	APOA1 (ENSUPAG00010005700) #29	SIK3 (ENSUPAG00010005710) #30	PAFAH1B2 (ENSUPAG00010005776) #31	SIDT2 (ENSUPAG00010005783) #32	TAGLN (ENSUPAG00010005839) #33	PCSK7 (ENSUPAG00010005844) #34	RNF214 (ENSUPAG00010005890) #35	BACE1 (ENSUPAG00010006050) #36	CEP164 (ENSUPAG00010006077)
Squirrel	MODERN SPECIES	142																NXPE2 (ENSSTOG00000010391) #22	CADM1 (ENSSTOG00000019484) #23	BUD13 (ENSSTOG00000002302) #24	ZPR1 (ENSSTOG00000002307) #25	APOA5 (ENSSTOG00000027825) #26	APOA4 (ENSSTOG00000019719) #27	APOC3 (ENSSTOG00000026818) #28	APOA1 (ENSSTOG00000002328) #29	SIK3 (ENSSTOG00000002330) #30	PAFAH1B2 (ENSSTOG00000011006) #31	SIDT2 (ENSSTOG00000011013) #32	TAGLN (ENSSTOG00000011033) #33	PCSK7 (ENSSTOG00000025485) #34	RNF214 (ENSSTOG00000026444) #35	BACE1 (ENSSTOG00000020402) #36	CEP164 (ENSSTOG00000011380)
Alpin marmot	MODERN SPECIES	25	ZBTB16 (ENSMMMG00000023298) #15	NNMT (ENSMMMG00000023293) #16	C11orf71 (ENSMMMG00000023278) #17	ENSMMMG00000023273 #18	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023265 #20	ENSMMMG00000023264 #20	ENSMMMG00000023262	ENSMMMG00000023260 #20	ENSMMMG00000023258 #21	ENSMMMG00000023254 #20	ENSMMMG00000023242 #21	ENSMMMG00000023231 #20	ENSMMMG00000023228	ENSMMMG00000023224 #21	NXPE2 (ENSMMMG00000023218) #22	CADM1 (ENSMMMG00000023027) #23	BUD13 (ENSMMMG00000022995) #24	ZPR1 (ENSMMMG00000022984) #25	APOA5 (ENSMMMG00000022979) #26	ENSMMMG00000022975	APOA4 (ENSMMMG00000022973) #27	APOC3 (ENSMMMG00000022968) #28	APOA1 (ENSMMMG00000022965) #29	SIK3 (ENSMMMG00000022956) #30	PAFAH1B2 (ENSMMMG00000022949) #31	SIDT2 (ENSMMMG00000022918) #32	TAGLN (ENSMMMG00000022913) #33	PCSK7 (ENSMMMG00000022903) #34	RNF214 (ENSMMMG00000022855) #35	BACE1 (ENSMMMG00000022841) #36
Eurasian red squirrel	MODERN SPECIES	2	CLDN25 (ENSSVLG00005019372)	USP28 (ENSSVLG00005019534) #12	HTR3B (ENSSVLG00005019693) #13	HTR3A (ENSSVLG00005019864) #14	ZBTB16 (ENSSVLG00005020211) #15	NNMT (ENSSVLG00005020280) #16	ENSSVLG00005020322	C11orf71 (ENSSVLG00005020339) #17	RBM7 (ENSSVLG00005020354) #18	REXO2 (ENSSVLG00005020422) #19	ENSSVLG00005020557 #20	ENSSVLG00005020642 #20	ENSSVLG00005020876 #20	ENSSVLG00005021093	NXPE4 (ENSSVLG00005021122) #21	NXPE2 (ENSSVLG00005021221) #22	CADM1 (ENSSVLG00005021385) #23	BUD13 (ENSSVLG00005021901) #24	ENSSVLG00005021926 #25	APOA5 (ENSSVLG00005022035) #26	APOA4 (ENSSVLG00005022074) #27	APOC3 (ENSSVLG00005022119) #28	APOA1 (ENSSVLG00005022170) #29	SIK3 (ENSSVLG00005022246) #30	PAFAH1B2 (ENSSVLG00005022556) #31	SIDT2 (ENSSVLG00005022651) #32	TAGLN (ENSSVLG00005022723) #33	PCSK7 (ENSSVLG00005022755) #34	RNF214 (ENSSVLG00005022823) #35	BACE1 (ENSSVLG00005022881) #36	CEP164 (ENSSVLG00005022973)
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	23	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Long-tailed chinchilla	MODERN SPECIES	119	TTC12 (ENSCLAG00000011783)	ANKK1 (ENSCLAG00000011795) #7	DRD2 (ENSCLAG00000016034) #8	TMPRSS5 (ENSCLAG00000016268) #10	ZW10 (ENSCLAG00000011976) #11	USP28 (ENSCLAG00000013072) #12	HTR3B (ENSCLAG00000016164) #13	HTR3A (ENSCLAG00000016559) #14	ZBTB16 (ENSCLAG00000014819) #15	NNMT (ENSCLAG00000014574) #16	C11orf71 (ENSCLAG00000014517) #17	RBM7 (ENSCLAG00000014875) #18	ENSCLAG00000017767	REXO2 (ENSCLAG00000011195) #19	NXPE4 (ENSCLAG00000011609) #21	NXPE2 (ENSCLAG00000011921) #22	CADM1 (ENSCLAG00000013357) #23	BUD13 (ENSCLAG00000014184) #24	ZPR1 (ENSCLAG00000014804) #25	APOA5 (ENSCLAG00000013015) #26	APOA4 (ENSCLAG00000015342) #27	APOC3 (ENSCLAG00000012828) #28	APOA1 (ENSCLAG00000011551) #29	SIK3 (ENSCLAG00000014337) #30	PAFAH1B2 (ENSCLAG00000014390) #31	SIDT2 (ENSCLAG00000016253) #32	TAGLN (ENSCLAG00000014865) #33	PCSK7 (ENSCLAG00000016220) #34	RNF214 (ENSCLAG00000013474) #35	BACE1 (ENSCLAG00000013254) #36	CEP164 (ENSCLAG00000016376)
Degu	MODERN SPECIES	121							ENSODEG00000009062	USP28 (ENSODEG00000010686) #12	HTR3B (ENSODEG00000011923) #13	HTR3A (ENSODEG00000012218) #14	ZBTB16 (ENSODEG00000012587) #15	NNMT (ENSODEG00000009612) #16	ENSODEG00000010164 #18	ENSODEG00000009750 #19	NXPE4 (ENSODEG00000009082) #21	NXPE2 (ENSODEG00000009114) #22	ENSODEG00000008886	ENSODEG00000019777	CADM1 (ENSODEG00000009219) #23	ENSODEG00000019764	BUD13 (ENSODEG00000009553) #24	ENSODEG00000009762 #25	APOA5 (ENSODEG00000009824) #26	APOA4 (ENSODEG00000009495) #27	APOC3 (ENSODEG00000009621) #28	APOA1 (ENSODEG00000009009) #29	SIK3 (ENSODEG00000008742) #30	ENSODEG00000009634 #31	SIDT2 (ENSODEG00000008713) #32	TAGLN (ENSODEG00000010754) #33	PCSK7 (ENSODEG00000009251) #34
Guinea pig	MODERN SPECIES	19	PTS (ENSCPOG00000034020)	NCAM1 (ENSCPOG00000004681)	TTC12 (ENSCPOG00000004685)	ANKK1 (ENSCPOG00000001170) #7	DRD2 (ENSCPOG00000009265) #8	ENSCPOG00000009863 #10	ZW10 (ENSCPOG00000005097) #11	USP28 (ENSCPOG00000001875) #12	HTR3B (ENSCPOG00000010829) #13	HTR3A (ENSCPOG00000010833) #14	ZBTB16 (ENSCPOG00000004151) #15	NNMT (ENSCPOG00000013034) #16	RBM7 (ENSCPOG00000034273) #18	REXO2 (ENSCPOG00000010548) #19	NXPE4 (ENSCPOG00000000299) #21	NXPE2 (ENSCPOG00000011786) #22	CADM1 (ENSCPOG00000005736) #23	BUD13 (ENSCPOG00000014440) #24	ZPR1 (ENSCPOG00000014442) #25	APOA5 (ENSCPOG00000014444) #26	APOA4 (ENSCPOG00000021763) #27	ENSCPOG00000025900 #28	APOA1 (ENSCPOG00000020511) #29	SIK3 (ENSCPOG00000014448) #30	ENSCPOG00000039233 #31	SIDT2 (ENSCPOG00000007005) #32	TAGLN (ENSCPOG00000035678) #33	PCSK7 (ENSCPOG00000008710) #34	RNF214 (ENSCPOG00000006642) #35	BACE1 (ENSCPOG00000012754) #36	CEP164 (ENSCPOG00000012768)
Naked mole-rat female	MODERN SPECIES	24	TMPRSS5 (ENSHGLG00000018841) #10	ZW10 (ENSHGLG00000013323) #11	CLDN25 (ENSHGLG00000014340)	USP28 (ENSHGLG00000003749) #12	HTR3B (ENSHGLG00000045380) #13	HTR3A (ENSHGLG00000006163) #14	ZBTB16 (ENSHGLG00000007562) #15	ENSHGLG00000015185 #16	ENSHGLG00000033388	ENSHGLG00000043710 #18	REXO2 (ENSHGLG00000039307) #19	ENSHGLG00000017602	ENSHGLG00000007101	NXPE1 (ENSHGLG00000044726) #20	NXPE4 (ENSHGLG00000013847) #21	NXPE2 (ENSHGLG00000046949) #22	CADM1 (ENSHGLG00000015066) #23	ENSHGLG00000001469	BUD13 (ENSHGLG00000013562) #24	ZPR1 (ENSHGLG00000014088) #25	APOA5 (ENSHGLG00000015377) #26	APOA4 (ENSHGLG00000049508) #27	APOC3 (ENSHGLG00000043547) #28	Apoa1 (ENSHGLG00000043209) #29	ENSHGLG00000019472	SIK3 (ENSHGLG00000018892) #30	ENSHGLG00000036675	PAFAH1B2 (ENSHGLG00000038396) #31	SIDT2 (ENSHGLG00000013525) #32	TAGLN (ENSHGLG00000036843) #33	PCSK7 (ENSHGLG00000018206) #34
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259.d #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Equus	ANCESTRAL SPECIES	25	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182960.a.a.a.a.b.qb.b	ENSGT00940000156093 #23	ENSGT00940000155458.tc	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000185356	ENSGT00950000182929.A #29	ENSGT00940000157259.d #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32
Horse	MODERN SPECIES	28	ANKK1 (ENSECAG00000011781) #7	DRD2 (ENSECAG00000013567) #8	TMPRSS5 (ENSECAG00000023128) #10	ZW10 (ENSECAG00000011623) #11	CLDN25 (ENSECAG00000005722)	USP28 (ENSECAG00000023344) #12	HTR3A (ENSECAG00000020191) #14	ZBTB16 (ENSECAG00000024358) #15	ENSECAG00000004515 ##16	NNMT (ENSECAG00000042589) #16	C7H11orf71 (ENSECAG00000005737) #17	RBM7 (ENSECAG00000004636) #18	REXO2 (ENSECAG00000005988) #19	NXPE1 (ENSECAG00000013719) #20	NXPE4 (ENSECAG00000012359) #21	ENSECAG00000053989 #22	ENSECAG00000050395	CADM1 (ENSECAG00000015144) #23	ENSECAG00000028225	BUD13 (ENSECAG00000008863) #24	ENSECAG00000032980	ZPR1 (ENSECAG00000010981) #25	APOA5 (ENSECAG00000000418) #26	APOA4 (ENSECAG00000004903) #27	APOC3 (ENSECAG00000039785) #28	APOA1 (ENSECAG00000009752) #29	SIK3 (ENSECAG00000010252) #30	ENSECAG00000058875	PAFAH1B2 (ENSECAG00000034204) #31	SIDT2 (ENSECAG00000021466) #32	TAGLN (ENSECAG00000056905) #33
Donkey	MODERN SPECIES	12	TTC12 (ENSEASG00005006742)	ANKK1 (ENSEASG00005006737) #7	DRD2 (ENSEASG00005006735) #8	TMPRSS5 (ENSEASG00005006720) #10	ZW10 (ENSEASG00005006707) #11	CLDN25 (ENSEASG00005006703)	USP28 (ENSEASG00005006691) #12	HTR3A (ENSEASG00005006687) #14	ENSEASG00005028806 ##16	ZBTB16 (ENSEASG00005006684) #15	C11orf71 (ENSEASG00005006678) #17	RBM7 (ENSEASG00005031719) #18	REXO2 (ENSEASG00005006674) #19	NXPE1 (ENSEASG00005006668) #20	NXPE4 (ENSEASG00005006666) #21	ENSEASG00005006664 #22	ENSEASG00005006660	CADM1 (ENSEASG00005006655) #23	ENSEASG00005006652	ENSEASG00005031751	BUD13 (ENSEASG00005006650) #24	ZPR1 (ENSEASG00005006581) #25	APOA5 (ENSEASG00005024582) #26	ENSEASG00005006573	APOA4 (ENSEASG00005006571) #27	APOC3 (ENSEASG00005036051) #28	ENSEASG00005006566	APOA1 (ENSEASG00005038098) #29	SIK3 (ENSEASG00005006529) #30	PAFAH1B2 (ENSEASG00005029720) #31	SIDT2 (ENSEASG00005005820) #32
Chiroptera	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.d #22
Megabat	MODERN SPECIES	8270																NXPE2 (ENSPVAG00000004082) #22
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Suina	ANCESTRAL SPECIES	5	ENSGT00940000155743	ENSGT00900000143181	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Chacoan peccary	MODERN SPECIES	906			NCAM1 (ENSCWAG00000018772)	TTC12 (ENSCWAG00000019975)	DRD2 (ENSCWAG00000020076) #8	TMPRSS5 (ENSCWAG00000020123) #10	ZW10 (ENSCWAG00000020214) #11	CLDN25 (ENSCWAG00000020231)	USP28 (ENSCWAG00000020248) #12	HTR3A (ENSCWAG00000020318) #14	ZBTB16 (ENSCWAG00000020362) #15	NNMT (ENSCWAG00000020374) #16	C11orf71 (ENSCWAG00000020385) #17	RBM7 (ENSCWAG00000020395) #18	REXO2 (ENSCWAG00000020411) #19	NXPE2 (ENSCWAG00000020440) #22	CADM1 (ENSCWAG00000020505) #23	BUD13 (ENSCWAG00000021092) #24	ZPR1 (ENSCWAG00000021109) #25	APOA5 (ENSCWAG00000021134) #26	ENSCWAG00000021143	APOA4 (ENSCWAG00000003954) #27	APOC3 (ENSCWAG00000003983) #28	APOA1 (ENSCWAG00000004011) #29	SIK3 (ENSCWAG00000004071) #30	PAFAH1B2 (ENSCWAG00000004321) #31	SIDT2 (ENSCWAG00000004351) #32	TAGLN (ENSCWAG00000004432) #33	PCSK7 (ENSCWAG00000004456) #34	RNF214 (ENSCWAG00000004491) #35	BACE1 (ENSCWAG00000004630) #36
Pig	MODERN SPECIES	17	NCAM1 (ENSSSCG00000015045)	ENSSSCG00000051311	TTC12 (ENSSSCG00000015047)	DRD2 (ENSSSCG00000015048) #8	ENSSSCG00000015049 #10	ZW10 (ENSSSCG00000015050) #11	CLDN25 (ENSSSCG00000015051)	USP28 (ENSSSCG00000015052) #12	HTR3B (ENSSSCG00000015053) #13	HTR3A (ENSSSCG00000024497) #14	ZBTB16 (ENSSSCG00000030095) #15	NNMT (ENSSSCG00000015054) #16	C11orf71 (ENSSSCG00000036867) #17	RBM7 (ENSSSCG00000027905) #18	REXO2 (ENSSSCG00000015056) #19	ENSSSCG00000029043 #22	CADM1 (ENSSSCG00000031831) #23	BUD13 (ENSSSCG00000015065) #24	ZPR1 (ENSSSCG00000015067) #25	APOA5 (ENSSSCG00000057143) #26	APOA4 (ENSSSCG00000040689) #27	APOC3 (ENSSSCG00000015069) #28	APOA1 (ENSSSCG00000030921) #29	SIK3 (ENSSSCG00000015071) #30	ENSSSCG00000050791	PAFAH1B2 (ENSSSCG00000024027) #31	SIDT2 (ENSSSCG00000015074) #32	TAGLN (ENSSSCG00000015073) #33	PCSK7 (ENSSSCG00000015072) #34	RNF214 (ENSSSCG00000015077) #35	BACE1 (ENSSSCG00000015079) #36
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00940000162260.g.b	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00940000162260.g.b	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT01090000260175.l	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000016760.c.a.a.b	ENSGT00940000162260.g.b	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000016760.c.a.a.b	ENSGT00940000162260.g.b	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34
Narwhal	MODERN SPECIES	314	NCAM1 (ENSMMNG00015019426)	TTC12 (ENSMMNG00015019038)	ANKK1 (ENSMMNG00015018978) #7	DRD2 (ENSMMNG00015018913) #8	TMPRSS5 (ENSMMNG00015018667) #10	ZW10 (ENSMMNG00015018560) #11	USP28 (ENSMMNG00015018348) #12	HTR3B (ENSMMNG00015018251) #13	HTR3A (ENSMMNG00015018195) #14	ZBTB16 (ENSMMNG00015018162) #15	NNMT (ENSMMNG00015018136) #16	C11orf71 (ENSMMNG00015018124) #17	ENSMMNG00015018102 #18	REXO2 (ENSMMNG00015017974) #19	NXPE4 (ENSMMNG00015017876) #21	NXPE2 (ENSMMNG00015017804) #22	CADM1 (ENSMMNG00015017567) #23	ENSMMNG00015017467	ENSMMNG00015017454	ENSMMNG00015017372	BUD13 (ENSMMNG00015017316) #24	ZPR1 (ENSMMNG00015017240) #25	APOA5 (ENSMMNG00015017211) #26	APOA4 (ENSMMNG00015017193) #27	APOC3 (ENSMMNG00015017153) #28	APOA1 (ENSMMNG00015017133) #29	SIK3 (ENSMMNG00015017039) #30	PAFAH1B2 (ENSMMNG00015016972) #31	SIDT2 (ENSMMNG00015016904) #32	TAGLN (ENSMMNG00015016866) #33	PCSK7 (ENSMMNG00015016753) #34
Beluga whale	MODERN SPECIES	70	TTC12 (ENSDLEG00000009663)	ANKK1 (ENSDLEG00000009758) #7	DRD2 (ENSDLEG00000009777) #8	ENSDLEG00000009835 #10	ZW10 (ENSDLEG00000010120) #11	USP28 (ENSDLEG00000010223) #12	HTR3B (ENSDLEG00000010470) #13	HTR3A (ENSDLEG00000010503) #14	ZBTB16 (ENSDLEG00000010544) #15	ENSDLEG00000010562 ##16	NNMT (ENSDLEG00000010577) #16	CUNH11orf71 (ENSDLEG00000010586) #17	RBM7 (ENSDLEG00000010595) #18	REXO2 (ENSDLEG00000010666) #19	NXPE4 (ENSDLEG00000010684) #21	ENSDLEG00000010731 #22	CADM1 (ENSDLEG00000010751) #23	ENSDLEG00000010773	ENSDLEG00000010788	BUD13 (ENSDLEG00000010833) #24	ZPR1 (ENSDLEG00000010861) #25	APOA5 (ENSDLEG00000010890) #26	ENSDLEG00000010906	APOA4 (ENSDLEG00000010932) #27	APOC3 (ENSDLEG00000010936) #28	APOA1 (ENSDLEG00000010950) #29	SIK3 (ENSDLEG00000010969) #30	PAFAH1B2 (ENSDLEG00000011153) #31	SIDT2 (ENSDLEG00000011177) #32	TAGLN (ENSDLEG00000011271) #33	PCSK7 (ENSDLEG00000011284) #34
Vaquita	MODERN SPECIES	19	NCAM1 (ENSPSNG00000006944)	TTC12 (ENSPSNG00000006695)	ANKK1 (ENSPSNG00000006624) #7	DRD2 (ENSPSNG00000006528) #8	TMPRSS5 (ENSPSNG00000006210) #10	ZW10 (ENSPSNG00000006107) #11	USP28 (ENSPSNG00000005964) #12	HTR3B (ENSPSNG00000005800) #13	HTR3A (ENSPSNG00000005709) #14	ZBTB16 (ENSPSNG00000005661) #15	NNMT (ENSPSNG00000005634) #16	ENSPSNG00000005613 #18	REXO2 (ENSPSNG00000005534) #19	ENSPSNG00000005495	NXPE4 (ENSPSNG00000005461) #21	NXPE2 (ENSPSNG00000005419) #22	CADM1 (ENSPSNG00000005112) #23	ENSPSNG00000004969	ENSPSNG00000004945	BUD13 (ENSPSNG00000004929) #24	ZPR1 (ENSPSNG00000004893) #25	APOA5 (ENSPSNG00000004870) #26	APOA4 (ENSPSNG00000004853) #27	APOC3 (ENSPSNG00000004824) #28	APOA1 (ENSPSNG00000004800) #29	SIK3 (ENSPSNG00000004747) #30	PAFAH1B2 (ENSPSNG00000004658) #31	SIDT2 (ENSPSNG00000004574) #32	TAGLN (ENSPSNG00000004514) #33	PCSK7 (ENSPSNG00000004488) #34	RNF214 (ENSPSNG00000004438) #35
Dolphin	MODERN SPECIES	5821													REXO2 (ENSTTRG00000014928) #19	ENSTTRG00000014918 #20	NXPE4 (ENSTTRG00000014914) #21	NXPE2 (ENSTTRG00000014894) #22
Sperm whale	MODERN SPECIES	7	PTS (ENSPCTG00005021826)	NCAM1 (ENSPCTG00005021261)	TTC12 (ENSPCTG00005021195)	ANKK1 (ENSPCTG00005021065) #7	DRD2 (ENSPCTG00005020978) #8	TMPRSS5 (ENSPCTG00005020684) #10	ZW10 (ENSPCTG00005020616) #11	CLDN25 (ENSPCTG00005020602)	USP28 (ENSPCTG00005020403) #12	HTR3B (ENSPCTG00005020240) #13	NNMT (ENSPCTG00005020216) #16	C16H11orf71 (ENSPCTG00005020202) #17	RBM7 (ENSPCTG00005020155) #18	REXO2 (ENSPCTG00005020068) #19	ENSPCTG00005020032 #21	NXPE2 (ENSPCTG00005019956) #22	CADM1 (ENSPCTG00005019141) #23	ENSPCTG00005019023	BUD13 (ENSPCTG00005018964) #24	ZPR1 (ENSPCTG00005018909) #25	APOA5 (ENSPCTG00005018861) #26	APOA4 (ENSPCTG00005018831) #27	APOC3 (ENSPCTG00005018770) #28	APOA1 (ENSPCTG00005018711) #29	SIK3 (ENSPCTG00005018268) #30	PAFAH1B2 (ENSPCTG00005018144) #31	SIDT2 (ENSPCTG00005018034) #32	TAGLN (ENSPCTG00005017989) #33	PCSK7 (ENSPCTG00005017913) #34	RNF214 (ENSPCTG00005017809) #35	BACE1 (ENSPCTG00005017700) #36
Blue whale	MODERN SPECIES	19	ANKK1 (ENSBMSG00010005556) #7	DRD2 (ENSBMSG00010005538) #8	TMPRSS5 (ENSBMSG00010005444) #10	ZW10 (ENSBMSG00010005389) #11	USP28 (ENSBMSG00010005292) #12	HTR3B (ENSBMSG00010005243) #13	HTR3A (ENSBMSG00010005211) #14	ZBTB16 (ENSBMSG00010005183) #15	ENSBMSG00010005174 ##16	NNMT (ENSBMSG00010005165) #16	C11orf71 (ENSBMSG00010005158) #17	ENSBMSG00010005152 #18	REXO2 (ENSBMSG00010005137) #19	ENSBMSG00010005113	NXPE4 (ENSBMSG00010005100) #21	NXPE2 (ENSBMSG00010005081) #22	CADM1 (ENSBMSG00010004961) #23	ENSBMSG00010004928	BUD13 (ENSBMSG00010004920) #24	ZPR1 (ENSBMSG00010004901) #25	APOA5 (ENSBMSG00010004890) #26	ENSBMSG00010004884	APOA4 (ENSBMSG00010004880) #27	APOC3 (ENSBMSG00010004871) #28	APOA1 (ENSBMSG00010004863) #29	SIK3 (ENSBMSG00010004803) #30	PAFAH1B2 (ENSBMSG00010004772) #31	SIDT2 (ENSBMSG00010004750) #32	TAGLN (ENSBMSG00010013615) #33	PCSK7 (ENSBMSG00010013591) #34	RNF214 (ENSBMSG00010013537) #35
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Yarkand deer	MODERN SPECIES		TTC12 (ENSCHYG00000001569)	DRD2 (ENSCHYG00000001660) #8	ENSCHYG00000001689	TMPRSS5 (ENSCHYG00000001706) #10	ZW10 (ENSCHYG00000001731) #11	CLDN25 (ENSCHYG00000001763)	USP28 (ENSCHYG00000001822) #12	HTR3B (ENSCHYG00000002085) #13	HTR3A (ENSCHYG00000002132) #14	ZBTB16 (ENSCHYG00000002154) #15	ENSCHYG00000002178 ##16	C11orf71 (ENSCHYG00000002185) #17	RBM7 (ENSCHYG00000002190) #18	REXO2 (ENSCHYG00000002217) #19	NXPE4 (ENSCHYG00000002305) #21	NXPE2 (ENSCHYG00000002317) #22	ENSCHYG00000002326	CADM1 (ENSCHYG00000002411) #23	ENSCHYG00000002781	ENSCHYG00000002786	BUD13 (ENSCHYG00000002803) #24	ZPR1 (ENSCHYG00000002829) #25	APOA5 (ENSCHYG00000002880) #26	APOA4 (ENSCHYG00000002893) #27	ENSCHYG00000002902	ENSCHYG00000002913 #29	SIK3 (ENSCHYG00000002953) #30	ENSCHYG00000003076	PAFAH1B2 (ENSCHYG00000003081) #31	SIDT2 (ENSCHYG00000003103) #32	TAGLN (ENSCHYG00000003204) #33
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Bovinae	ANCESTRAL SPECIES	21	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT01040000241639	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Bos	ANCESTRAL SPECIES	20	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT01040000241639	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Bos_a	ANCESTRAL SPECIES	15	ENSGT00900000143181	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT01040000241639	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Domestic yak	MODERN SPECIES	4	NCAM1 (ENSBGRG00000006946)	TTC12 (ENSBGRG00000006752)	DRD2 (ENSBGRG00000006710) #8	TMPRSS5 (ENSBGRG00000006680) #10	ZW10 (ENSBGRG00000006589) #11	CLDN25 (ENSBGRG00000006567)	USP28 (ENSBGRG00000005908) #12	HTR3B (ENSBGRG00000005842) #13	HTR3A (ENSBGRG00000005742) #14	ZBTB16 (ENSBGRG00000005665) #15	C11orf71 (ENSBGRG00000005639) #17	RBM7 (ENSBGRG00000005606) #18	REXO2 (ENSBGRG00000005503) #19	ENSBGRG00000005477	NXPE4 (ENSBGRG00000005398) #21	NXPE2 (ENSBGRG00000005371) #22	ENSBGRG00000005355	CADM1 (ENSBGRG00000004215) #23	ENSBGRG00000004097	ENSBGRG00000004083	ENSBGRG00000004077	BUD13 (ENSBGRG00000004009) #24	ZPR1 (ENSBGRG00000003833) #25	APOA5 (ENSBGRG00000003796) #26	ENSBGRG00000003763	APOA4 (ENSBGRG00000003731) #27	APOC3 (ENSBGRG00000003718) #28	APOA1 (ENSBGRG00000003668) #29	SIK3 (ENSBGRG00000025547) #30	PAFAH1B2 (ENSBGRG00000025526) #31	SIDT2 (ENSBGRG00000025333) #32
Wild yak	MODERN SPECIES	1792																ENSBMUG00000006241 #22
Bos_b	ANCESTRAL SPECIES	19	ENSGT00940000155743	ENSGT00940000161758	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT01040000241639	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Hybrid Bos Indicus	MODERN SPECIES	6	ENSBIXG00005003583	NCAM1 (ENSBIXG00005022045)	TTC12 (ENSBIXG00005022216)	DRD2 (ENSBIXG00005022287) #8	TMPRSS5 (ENSBIXG00005022423) #10	ZW10 (ENSBIXG00005022510) #11	CLDN25 (ENSBIXG00005007227)	USP28 (ENSBIXG00005003888) #12	HTR3B (ENSBIXG00005022743) #13	HTR3A (ENSBIXG00005022765) #14	ZBTB16 (ENSBIXG00005022846) #15	C11orf71 (ENSBIXG00005022918) #17	RBM7 (ENSBIXG00005022933) #18	REXO2 (ENSBIXG00005023058) #19	NXPE4 (ENSBIXG00005023112) #21	NXPE2 (ENSBIXG00005023143) #22	CADM1 (ENSBIXG00005023494) #23	ENSBIXG00005007389	BUD13 (ENSBIXG00005023645) #24	ZPR1 (ENSBIXG00005023719) #25	APOA5 (ENSBIXG00005023793) #26	ENSBIXG00005023816	APOA4 (ENSBIXG00005023843) #27	ENSBIXG00005023865	APOA1 (ENSBIXG00005004093) #29	SIK3 (ENSBIXG00005024000) #30	PAFAH1B2 (ENSBIXG00005004117) #31	TAGLN (ENSBIXG00005024100) #33	PCSK7 (ENSBIXG00005024173) #34	SIDT2 (ENSBIXG00005004156) #32	RNF214 (ENSBIXG00005024475) #35
Cow	MODERN SPECIES	6	NCAM1 (ENSBTAG00000005710)	TTC12 (ENSBTAG00000010008)	DRD2 (ENSBTAG00000010860) #8	ENSBTAG00000051043 #10	ZW10 (ENSBTAG00000020066) #11	CLDN25 (ENSBTAG00000039149)	USP28 (ENSBTAG00000002323) #12	HTR3B (ENSBTAG00000031330) #13	HTR3A (ENSBTAG00000010791) #14	ZBTB16 (ENSBTAG00000011266) #15	ENSBTAG00000008564 ##16	C15H11orf71 (ENSBTAG00000008220) #17	RBM7 (ENSBTAG00000008219) #18	REXO2 (ENSBTAG00000005843) #19	NXPE4 (ENSBTAG00000005945) #21	NXPE2 (ENSBTAG00000031362) #22	CADM1 (ENSBTAG00000000977) #23	ENSBTAG00000051331	BUD13 (ENSBTAG00000016855) #24	ZPR1 (ENSBTAG00000002650) #25	APOA5 (ENSBTAG00000019764) #26	APOA4 (ENSBTAG00000019770) #27	ENSBTAG00000049816	APOC3 (ENSBTAG00000012398) #28	APOA1 (ENSBTAG00000002258) #29	SIK3 (ENSBTAG00000015119) #30	PAFAH1B2 (ENSBTAG00000005627) #31	SIDT2 (ENSBTAG00000007192) #32	TAGLN (ENSBTAG00000007196) #33	PCSK7 (ENSBTAG00000003052) #34	RNF214 (ENSBTAG00000019358) #35
American bison	MODERN SPECIES	3365	NCAM1 (ENSBBBG00000011422)	TTC12 (ENSBBBG00000011240)	DRD2 (ENSBBBG00000011207) #8	TMPRSS5 (ENSBBBG00000011175) #10	ZW10 (ENSBBBG00000011100) #11	CLDN25 (ENSBBBG00000011089)	USP28 (ENSBBBG00000011084) #12	HTR3B (ENSBBBG00000011021) #13	HTR3A (ENSBBBG00000001979) #14	ZBTB16 (ENSBBBG00000010998) #15	ENSBBBG00000008488 ##16	C11orf71 (ENSBBBG00000001966) #17	RBM7 (ENSBBBG00000010981) #18	REXO2 (ENSBBBG00000010953) #19	NXPE4 (ENSBBBG00000010911) #21	NXPE2 (ENSBBBG00000007767) #22	CADM1 (ENSBBBG00000006633) #23	ENSBBBG00000000247	BUD13 (ENSBBBG00000024621) #24	ZPR1 (ENSBBBG00000024593) #25	APOA5 (ENSBBBG00000024548) #26	APOA1 (ENSBBBG00000006800) #29	ENSBBBG00000024485	APOC3 (ENSBBBG00000024468) #28	SIK3 (ENSBBBG00000006365) #30	PAFAH1B2 (ENSBBBG00000024229) #31	SIDT2 (ENSBBBG00000024169) #32	TAGLN (ENSBBBG00000023920) #33	PCSK7 (ENSBBBG00000023884) #34	RNF214 (ENSBBBG00000023813) #35	BACE1 (ENSBBBG00000023674) #36
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000161758	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35
Goat	MODERN SPECIES	6	TTC12 (ENSCHIG00000006414)	ANKK1 (ENSCHIG00000024082) #7	DRD2 (ENSCHIG00000004216) #8	TMPRSS5 (ENSCHIG00000017835) #10	ZW10 (ENSCHIG00000025959) #11	USP28 (ENSCHIG00000016960) #12	HTR3B (ENSCHIG00000011976) #13	HTR3A (ENSCHIG00000025459) #14	ZBTB16 (ENSCHIG00000008305) #15	ENSCHIG00000008702 ##16	ENSCHIG00000019784	C11orf71 (ENSCHIG00000012470) #17	ENSCHIG00000008632 #18	REXO2 (ENSCHIG00000009264) #19	NXPE4 (ENSCHIG00000023202) #21	NXPE2 (ENSCHIG00000014116) #22	CADM1 (ENSCHIG00000025944) #23	ENSCHIG00000023860	BUD13 (ENSCHIG00000011480) #24	ZPR1 (ENSCHIG00000014226) #25	APOA5 (ENSCHIG00000008250) #26	APOA4 (ENSCHIG00000012715) #27	APOC3 (ENSCHIG00000014534) #28	ENSCHIG00000026573 #29	ENSCHIG00000012044	ENSCHIG00000021348 #29	SIK3 (ENSCHIG00000019818) #30	PAFAH1B2 (ENSCHIG00000014368) #31	SIDT2 (ENSCHIG00000014004) #32	TAGLN (ENSCHIG00000014769) #33	PCSK7 (ENSCHIG00000022978) #34
Siberian musk deer	MODERN SPECIES	1171	NCAM1 (ENSMMSG00000022395)	TTC12 (ENSMMSG00000022307)	DRD2 (ENSMMSG00000022227) #8	ENSMMSG00000022181 #10	ZW10 (ENSMMSG00000022114) #11	CLDN25 (ENSMMSG00000022091)	USP28 (ENSMMSG00000021700) #12	HTR3B (ENSMMSG00000021606) #13	HTR3A (ENSMMSG00000021560) #14	ZBTB16 (ENSMMSG00000021523) #15	ENSMMSG00000021510 #16	C11orf71 (ENSMMSG00000021496) #17	RBM7 (ENSMMSG00000021482) #18	REXO2 (ENSMMSG00000021410) #19	NXPE4 (ENSMMSG00000021386) #21	NXPE2 (ENSMMSG00000021354) #22	CADM1 (ENSMMSG00000021066) #23
Camelidae	ANCESTRAL SPECIES	31					ENSGT00940000174149	ENSGT00390000016427 #11	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.a.a ##16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b	ENSGT00940000155354	ENSGT00940000153062.A.b.b
Arabian camel	MODERN SPECIES	26	TMPRSS5 (ENSCDRG00005012392) #10	ZW10 (ENSCDRG00005012776) #11	ENSCDRG00005014029	CLDN25 (ENSCDRG00005014060)	USP28 (ENSCDRG00005014122) #12	HTR3B (ENSCDRG00005014854) #13	ENSCDRG00005014927 #14	ENSCDRG00005014949	ZBTB16 (ENSCDRG00005014980) #15	ENSCDRG00005015068 ##16	ENSCDRG00005015092	C11orf71 (ENSCDRG00005015140) #17	RBM7 (ENSCDRG00005015155) #18	REXO2 (ENSCDRG00005015219) #19	NXPE4 (ENSCDRG00005015340) #21	NXPE2 (ENSCDRG00005015404) #22	CADM1 (ENSCDRG00005015534) #23	BUD13 (ENSCDRG00005017430) #24	APOA5 (ENSCDRG00005017749) #26	APOA4 (ENSCDRG00005017771) #27	APOA1 (ENSCDRG00005017799) #29	SIK3 (ENSCDRG00005017857) #30	PAFAH1B2 (ENSCDRG00005018084) #31	SIDT2 (ENSCDRG00005018155) #32	TAGLN (ENSCDRG00005018224) #33	PCSK7 (ENSCDRG00005018259) #34	RNF214 (ENSCDRG00005018392) #35	BACE1 (ENSCDRG00005018468) #36	CEP164 (ENSCDRG00005018590)	DSCAML1 (ENSCDRG00005018684)	ENSCDRG00005019003
Alpaca	MODERN SPECIES	654															NXPE4 (ENSVPAG00000007296) #21	NXPE2 (ENSVPAG00000007297) #22
Atlantogenata	ANCESTRAL SPECIES	40	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b #16	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.c #20	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30
Xenarthra	ANCESTRAL SPECIES	133					ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000007962 #17	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.d #22	ENSGT00940000156093 #23	ENSGT00520000058142	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30
Sloth	MODERN SPECIES	7539																NXPE2 (ENSCHOG00000004893) #22
Armadillo	MODERN SPECIES	2292			TMPRSS5 (ENSDNOG00000019650) #10	ZW10 (ENSDNOG00000043541) #11	CLDN25 (ENSDNOG00000032955)	USP28 (ENSDNOG00000003292) #12	HTR3B (ENSDNOG00000012801) #13	HTR3A (ENSDNOG00000012807) #14	ZBTB16 (ENSDNOG00000047356) #15	C11orf71 (ENSDNOG00000018420) #17	RBM7 (ENSDNOG00000018423) #18	REXO2 (ENSDNOG00000046533) #19	NXPE1 (ENSDNOG00000006452) #20	ENSDNOG00000046907 #21	ENSDNOG00000044479 #21	NXPE2 (ENSDNOG00000024941) #22	CADM1 (ENSDNOG00000031312) #23	ENSDNOG00000045803	BUD13 (ENSDNOG00000042988) #24	ZPR1 (ENSDNOG00000007318) #25	APOA5 (ENSDNOG00000007328) #26	APOA4 (ENSDNOG00000035392) #27	ENSDNOG00000041675 #28	APOA1 (ENSDNOG00000025887) #29	SIK3 (ENSDNOG00000005844) #30
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Eulipotyphla	DUPLICATION
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c.a #20
Common shrew	MODERN SPECIES	7341																ENSSARG00000001708 #20
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c.b #20
Hedgehog	DUPLICATION
Hedgehog	DUPLICATION
Hedgehog	MODERN SPECIES	10318																ENSEEUG00000012550 #20
Hedgehog	MODERN SPECIES	9890																ENSEEUG00000003425 #20
Hedgehog	MODERN SPECIES	10614																ENSEEUG00000009643 #20
Common shrew	MODERN SPECIES	6722																ENSSARG00000009484 #20
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000162260.g.b	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000162260.g.b	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Dolphin	MODERN SPECIES	5821														NXPE2 (ENSTTRG00000014894) #22	NXPE4 (ENSTTRG00000014914) #21	ENSTTRG00000014918 #20	REXO2 (ENSTTRG00000014928) #19
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Chiroptera	ANCESTRAL SPECIES	33	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00900000143181	ENSGT00940000155743
Microchiroptera	ANCESTRAL SPECIES	34	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00900000143181	ENSGT00940000155743
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010009353 #33	SIDT2 (ENSRFEG00010009244) #32	PAFAH1B2 (ENSRFEG00010009155) #31	ENSRFEG00010009106	SIK3 (ENSRFEG00010008977) #30	APOA1 (ENSRFEG00010008873) #29	ENSRFEG00010008809 #28	APOA4 (ENSRFEG00010008766) #27	ENSRFEG00010008710	APOA5 (ENSRFEG00010008677) #26	ZNF259 (ENSRFEG00010008540) #25	BUD13 (ENSRFEG00010008489) #24	ENSRFEG00010008409	ENSRFEG00010008357	CADM1 (ENSRFEG00010007749) #23	NXPE1 (ENSRFEG00010007603) #20	REXO2 (ENSRFEG00010007459) #19	ENSRFEG00010007427	RBM7 (ENSRFEG00010007375) #18	C11orf71 (ENSRFEG00010007332) #17	NNMT (ENSRFEG00010007304) #16	ZBTB16 (ENSRFEG00010007284) #15	HTR3A (ENSRFEG00010007230) #14	HTR3B (ENSRFEG00010007133) #13	USP28 (ENSRFEG00010006791) #12	ZW10 (ENSRFEG00010015705) #11	TMPRSS5 (ENSRFEG00010014953) #10	DRD2 (ENSRFEG00010014855) #8	ANKK1 (ENSRFEG00010014697) #7	TTC12 (ENSRFEG00010014547)	ENSRFEG00010014452
Megabat	MODERN SPECIES	3514															NXPE4 (ENSPVAG00000005297) #21	ENSPVAG00000005296 #20	REXO2 (ENSPVAG00000005295) #19	RBM7 (ENSPVAG00000005294) #18	NNMT (ENSPVAG00000005292) #16	ZBTB16 (ENSPVAG00000005291) #15	HTR3A (ENSPVAG00000005290) #14	HTR3B (ENSPVAG00000005289) #13	USP28 (ENSPVAG00000005288) #12	ZW10 (ENSPVAG00000005286) #11
Equus	ANCESTRAL SPECIES	25	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000155458.tc	ENSGT00940000156093 #23	ENSGT00950000182960.a.a.a.a.b.qb.b	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Horse	MODERN SPECIES	28	PAFAH1B2 (ENSECAG00000034204) #31	ENSECAG00000058875	SIK3 (ENSECAG00000010252) #30	APOA1 (ENSECAG00000009752) #29	APOC3 (ENSECAG00000039785) #28	APOA4 (ENSECAG00000004903) #27	APOA5 (ENSECAG00000000418) #26	ZPR1 (ENSECAG00000010981) #25	ENSECAG00000032980	BUD13 (ENSECAG00000008863) #24	ENSECAG00000028225	CADM1 (ENSECAG00000015144) #23	ENSECAG00000050395	ENSECAG00000053989 #22	NXPE4 (ENSECAG00000012359) #21	NXPE1 (ENSECAG00000013719) #20	REXO2 (ENSECAG00000005988) #19	RBM7 (ENSECAG00000004636) #18	C7H11orf71 (ENSECAG00000005737) #17	NNMT (ENSECAG00000042589) #16	ENSECAG00000004515 ##16	ZBTB16 (ENSECAG00000024358) #15	HTR3A (ENSECAG00000020191) #14	USP28 (ENSECAG00000023344) #12	CLDN25 (ENSECAG00000005722)	ZW10 (ENSECAG00000011623) #11	TMPRSS5 (ENSECAG00000023128) #10	DRD2 (ENSECAG00000013567) #8	ANKK1 (ENSECAG00000011781) #7	TTC12 (ENSECAG00000017966)	NCAM1 (ENSECAG00000019193)
Donkey	MODERN SPECIES	12	SIK3 (ENSEASG00005006529) #30	APOA1 (ENSEASG00005038098) #29	ENSEASG00005006566	APOC3 (ENSEASG00005036051) #28	APOA4 (ENSEASG00005006571) #27	ENSEASG00005006573	APOA5 (ENSEASG00005024582) #26	ZPR1 (ENSEASG00005006581) #25	BUD13 (ENSEASG00005006650) #24	ENSEASG00005031751	ENSEASG00005006652	CADM1 (ENSEASG00005006655) #23	ENSEASG00005006660	ENSEASG00005006664 #22	NXPE4 (ENSEASG00005006666) #21	NXPE1 (ENSEASG00005006668) #20	REXO2 (ENSEASG00005006674) #19	RBM7 (ENSEASG00005031719) #18	C11orf71 (ENSEASG00005006678) #17	ZBTB16 (ENSEASG00005006684) #15	ENSEASG00005028806 ##16	HTR3A (ENSEASG00005006687) #14	USP28 (ENSEASG00005006691) #12	CLDN25 (ENSEASG00005006703)	ZW10 (ENSEASG00005006707) #11	TMPRSS5 (ENSEASG00005006720) #10	DRD2 (ENSEASG00005006735) #8	ANKK1 (ENSEASG00005006737) #7	TTC12 (ENSEASG00005006742)	NCAM1 (ENSEASG00005006756)	ENSEASG00005038442
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Primates	ANCESTRAL SPECIES		ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cercopithecinae_d	ANCESTRAL SPECIES	45													ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Drill	MODERN SPECIES	621												ENSMLEG00000004443	CADM1 (ENSMLEG00000033608) #23	NXPE2 (ENSMLEG00000000534) #22	NXPE4 (ENSMLEG00000044166) #21	NXPE1 (ENSMLEG00000032297) #20	REXO2 (ENSMLEG00000036571) #19	RBM7 (ENSMLEG00000041953) #18	C11orf71 (ENSMLEG00000042004) #17	NNMT (ENSMLEG00000040550) #16	ZBTB16 (ENSMLEG00000027152) #15	HTR3A (ENSMLEG00000038776) #14	HTR3B (ENSMLEG00000041346) #13	USP28 (ENSMLEG00000020953) #12	ZW10 (ENSMLEG00000031557) #11	ENSMLEG00000035644 #10	DRD2 (ENSMLEG00000044244) #8	ANKK1 (ENSMLEG00000030592) #7	TTC12 (ENSMLEG00000038689)	ENSMLEG00000041064	NCAM1 (ENSMLEG00000028968)
Sooty mangabey	MODERN SPECIES	138													CADM1 (ENSCATG00000034424) #23	NXPE2 (ENSCATG00000011895) #22	NXPE4 (ENSCATG00000033776) #21	NXPE1 (ENSCATG00000044822) #20	REXO2 (ENSCATG00000015278) #19	RBM7 (ENSCATG00000037361) #18	C11orf71 (ENSCATG00000040083) #17	ENSCATG00000020795	NNMT (ENSCATG00000034839) #16	ZBTB16 (ENSCATG00000039272) #15	HTR3A (ENSCATG00000034214) #14	HTR3B (ENSCATG00000044851) #13	USP28 (ENSCATG00000031506) #12	ZW10 (ENSCATG00000029954) #11	TMPRSS5 (ENSCATG00000039143) #10	DRD2 (ENSCATG00000040093) #8	ANKK1 (ENSCATG00000021625) #7	TTC12 (ENSCATG00000036329)	NCAM1 (ENSCATG00000032945)
Macaca	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c #20
Pig-tailed macaque	MODERN SPECIES	537	ENSMNEG00000040272 #37	RNF214 (ENSMNEG00000044588) #35	PCSK7 (ENSMNEG00000043226) #34	TAGLN (ENSMNEG00000030425) #33	SIDT2 (ENSMNEG00000032672) #32	PAFAH1B2 (ENSMNEG00000042408) #31	SIK3 (ENSMNEG00000036838) #30	APOA1 (ENSMNEG00000040977) #29	APOC3 (ENSMNEG00000044814) #28	APOA4 (ENSMNEG00000038703) #27	APOA5 (ENSMNEG00000041189) #26	ZPR1 (ENSMNEG00000032911) #25	BUD13 (ENSMNEG00000039484) #24	CADM1 (ENSMNEG00000043391) #23	NXPE2 (ENSMNEG00000039026) #22	NXPE1 (ENSMNEG00000028820) #20	REXO2 (ENSMNEG00000033379) #19	RBM7 (ENSMNEG00000005397) #18	C11orf71 (ENSMNEG00000037393) #17	ENSMNEG00000028371	NNMT (ENSMNEG00000036692) #16	ZBTB16 (ENSMNEG00000037837) #15
Vervet Monkey	MODERN SPECIES		RNF214 (ENSCSAG00000002685) #35	PCSK7 (ENSCSAG00000002686) #34	TAGLN (ENSCSAG00000002690) #33	SIDT2 (ENSCSAG00000002692) #32	PAFAH1B2 (ENSCSAG00000002695) #31	SIK3 (ENSCSAG00000002703) #30	APOA1 (ENSCSAG00000002709) #29	APOC3 (ENSCSAG00000002711) #28	APOA4 (ENSCSAG00000002712) #27	APOA5 (ENSCSAG00000002717) #26	ZPR1 (ENSCSAG00000002722) #25	BUD13 (ENSCSAG00000002732) #24	CADM1 (ENSCSAG00000002740) #23	NXPE2 (ENSCSAG00000002745) #22	NXPE4 (ENSCSAG00000002750) #21	NXPE1 (ENSCSAG00000002753) #20	REXO2 (ENSCSAG00000002754) #19	RBM7 (ENSCSAG00000002756) #18	C11orf71 (ENSCSAG00000000596) #17	NNMT (ENSCSAG00000002757) #16	ZBTB16 (ENSCSAG00000002761) #15	HTR3A (ENSCSAG00000002771) #14	HTR3B (ENSCSAG00000002779) #13	ENSCSAG00000002782	USP28 (ENSCSAG00000002785) #12	CLDN25 (ENSCSAG00000000597)	ZW10 (ENSCSAG00000002794) #11	TMPRSS5 (ENSCSAG00000002803) #10	DRD2 (ENSCSAG00000002807) #8	TTC12 (ENSCSAG00000002812)	NCAM1 (ENSCSAG00000002814)
Rhinopithecus	ANCESTRAL SPECIES	30	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743	ENSGT00910000147129
Golden snub-nosed monkey	MODERN SPECIES	1668														NXPE2 (ENSRROG00000040744) #22	NXPE4 (ENSRROG00000042339) #21	NXPE1 (ENSRROG00000044244) #20	REXO2 (ENSRROG00000038928) #19	RBM7 (ENSRROG00000032280) #18	C11orf71 (ENSRROG00000007675) #17	NNMT (ENSRROG00000036650) #16	ZBTB16 (ENSRROG00000036987) #15	HTR3A (ENSRROG00000035619) #14	HTR3B (ENSRROG00000031365) #13	USP28 (ENSRROG00000026490) #12	ENSRROG00000038644	ZW10 (ENSRROG00000031796) #11	TMPRSS5 (ENSRROG00000039822) #10
Black snub-nosed monkey	MODERN SPECIES	722	ENSRBIG00000029046 #35	PCSK7 (ENSRBIG00000034987) #34	TAGLN (ENSRBIG00000031507) #33	SIDT2 (ENSRBIG00000042199) #32	PAFAH1B2 (ENSRBIG00000035123) #31	SIK3 (ENSRBIG00000028314) #30	APOA1 (ENSRBIG00000044736) #29	APOC3 (ENSRBIG00000003998) #28	APOA4 (ENSRBIG00000027521) #27	APOA5 (ENSRBIG00000031722) #26	ZPR1 (ENSRBIG00000041749) #25	BUD13 (ENSRBIG00000001857) #24	CADM1 (ENSRBIG00000038512) #23	NXPE2 (ENSRBIG00000038016) #22	NXPE4 (ENSRBIG00000026591) #21	NXPE1 (ENSRBIG00000039952) #20	REXO2 (ENSRBIG00000037809) #19	RBM7 (ENSRBIG00000044762) #18	C11orf71 (ENSRBIG00000019664) #17	NNMT (ENSRBIG00000041263) #16	ZBTB16 (ENSRBIG00000035195) #15	HTR3A (ENSRBIG00000033910) #14	HTR3B (ENSRBIG00000044677) #13	USP28 (ENSRBIG00000044717) #12	ZW10 (ENSRBIG00000030358) #11	TMPRSS5 (ENSRBIG00000031311) #10	DRD2 (ENSRBIG00000027761) #8	ANKK1 (ENSRBIG00000028582) #7	TTC12 (ENSRBIG00000043217)	NCAM1 (ENSRBIG00000013766)	ENSRBIG00000042986
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.g.b #18	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Gorilla	MODERN SPECIES	2	RNF214 (ENSGGOG00000014362) #35	PCSK7 (ENSGGOG00000014344) #34	TAGLN (ENSGGOG00000014333) #33	SIDT2 (ENSGGOG00000014318) #32	PAFAH1B2 (ENSGGOG00000037923) #31	SIK3 (ENSGGOG00000011085) #30	APOA1 (ENSGGOG00000008006) #29	APOC3 (ENSGGOG00000008004) #28	APOA4 (ENSGGOG00000028447) #27	APOA5 (ENSGGOG00000000666) #26	ZPR1 (ENSGGOG00000000664) #25	BUD13 (ENSGGOG00000000662) #24	CADM1 (ENSGGOG00000010219) #23	ENSGGOG00000010022 #22	NXPE4 (ENSGGOG00000008842) #21	NXPE1 (ENSGGOG00000024286) #20	REXO2 (ENSGGOG00000023267) #19	ENSGGOG00000009941 #18	ENSGGOG00000038884	ENSGGOG00000009932 #17	NNMT (ENSGGOG00000003749) #16	ZBTB16 (ENSGGOG00000000319) #15	HTR3A (ENSGGOG00000014709) #14	HTR3B (ENSGGOG00000005084) #13	USP28 (ENSGGOG00000005119) #12	ENSGGOG00000027059	ZW10 (ENSGGOG00000015283) #11	TMPRSS5 (ENSGGOG00000026807) #10	DRD2 (ENSGGOG00000003244) #8	ANKK1 (ENSGGOG00000003237) #7	TTC12 (ENSGGOG00000003228)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.g.b #18	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Human	MODERN SPECIES	2	RNF214 (ENSG00000167257) #35	PCSK7 (ENSG00000160613) #34	TAGLN (ENSG00000149591) #33	SIDT2 (ENSG00000149577) #32	PAFAH1B2 (ENSG00000168092) #31	SIK3 (ENSG00000160584) #30	APOA1 (ENSG00000118137) #29	APOC3 (ENSG00000110245) #28	APOA4 (ENSG00000110244) #27	APOA5 (ENSG00000110243) #26	ZPR1 (ENSG00000109917) #25	BUD13 (ENSG00000137656) #24	CADM1 (ENSG00000182985) #23	NXPE2 (ENSG00000204361) #22	NXPE4 (ENSG00000137634) #21	NXPE1 (ENSG00000095110) #20	REXO2 (ENSG00000076043) #19	RBM7 (ENSG00000076053) #18	C11orf71 (ENSG00000180425) #17	NNMT (ENSG00000166741) #16	ZBTB16 (ENSG00000109906) #15	HTR3A (ENSG00000166736) #14	HTR3B (ENSG00000149305) #13	USP28 (ENSG00000048028) #12	CLDN25 (ENSG00000228607)	ZW10 (ENSG00000086827) #11	TMPRSS5 (ENSG00000166682) #10	DRD2 (ENSG00000149295) #8	ANKK1 (ENSG00000170209) #7	TTC12 (ENSG00000149292)	NCAM1 (ENSG00000149294)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259.e #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00910000148725	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.g.b #18	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00530000063801.a.m.b.a	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Bonobo	MODERN SPECIES	2	PCSK7 (ENSPPAG00000039272) #34	TAGLN (ENSPPAG00000041234) #33	SIDT2 (ENSPPAG00000029761) #32	PAFAH1B2 (ENSPPAG00000027377) #31	SIK3 (ENSPPAG00000036163) #30	APOA1 (ENSPPAG00000026972) #29	APOC3 (ENSPPAG00000016679) #28	APOA4 (ENSPPAG00000037193) #27	APOA5 (ENSPPAG00000040538) #26	ZPR1 (ENSPPAG00000035589) #25	BUD13 (ENSPPAG00000040801) #24	ENSPPAG00000029893	CADM1 (ENSPPAG00000036227) #23	NXPE2 (ENSPPAG00000028189) #22	ENSPPAG00000036856 #21	NXPE1 (ENSPPAG00000039026) #20	REXO2 (ENSPPAG00000039849) #19	RBM7 (ENSPPAG00000027572) #18	ENSPPAG00000038521	ENSPPAG00000027006 #17	NNMT (ENSPPAG00000029095) #16	ZBTB16 (ENSPPAG00000034578) #15	HTR3A (ENSPPAG00000023311) #14	HTR3B (ENSPPAG00000027697) #13	USP28 (ENSPPAG00000042077) #12	ENSPPAG00000029813	CLDN25 (ENSPPAG00000007965)	ZW10 (ENSPPAG00000031453) #11	TMPRSS5 (ENSPPAG00000038681) #10	DRD2 (ENSPPAG00000029985) #8	ANKK1 (ENSPPAG00000026996) #7
Chimpanzee	MODERN SPECIES	2	PCSK7 (ENSPTRG00000004321) #34	TAGLN (ENSPTRG00000004320) #33	SIDT2 (ENSPTRG00000004319) #32	PAFAH1B2 (ENSPTRG00000004318) #31	SIK3 (ENSPTRG00000004317) #30	APOA1 (ENSPTRG00000004316) #29	APOC3 (ENSPTRG00000004315) #28	APOA4 (ENSPTRG00000004314) #27	APOA5 (ENSPTRG00000004313) #26	ZPR1 (ENSPTRG00000004312) #25	BUD13 (ENSPTRG00000004311) #24	ENSPTRG00000051389	CADM1 (ENSPTRG00000004310) #23	NXPE2 (ENSPTRG00000028394) #22	NXPE4 (ENSPTRG00000004308) #21	NXPE1 (ENSPTRG00000004307) #20	REXO2 (ENSPTRG00000004306) #19	RBM7 (ENSPTRG00000004305) #18	ENSPTRG00000044509	C11H11orf71 (ENSPTRG00000004304) #17	NNMT (ENSPTRG00000004303) #16	ZBTB16 (ENSPTRG00000004302) #15	HTR3A (ENSPTRG00000004301) #14	HTR3B (ENSPTRG00000004300) #13	USP28 (ENSPTRG00000004299) #12	ENSPTRG00000050654	CLDN25 (ENSPTRG00000041604)	ZW10 (ENSPTRG00000004297) #11	TMPRSS5 (ENSPTRG00000049624) #10	DRD2 (ENSPTRG00000004295) #8	ANKK1 (ENSPTRG00000004293) #7
Orangutan	MODERN SPECIES	2	RNF214 (ENSPPYG00000003911) #35	TAGLN (ENSPPYG00000003909) #33	PCSK7 (ENSPPYG00000003910) #34	SIDT2 (ENSPPYG00000003908) #32	PAFAH1B2 (ENSPPYG00000003907) #31	SIK3 (ENSPPYG00000003905) #30	APOA1 (ENSPPYG00000003904) #29	ENSPPYG00000003903 #28	APOA4 (ENSPPYG00000003902) #27	APOA5 (ENSPPYG00000031421) #26	ZPR1 (ENSPPYG00000025914) #25	BUD13 (ENSPPYG00000003900) #24	CADM1 (ENSPPYG00000003899) #23	NXPE2 (ENSPPYG00000003898) #22	NXPE4 (ENSPPYG00000003897) #21	NXPE1 (ENSPPYG00000003896) #20	REXO2 (ENSPPYG00000003895) #19	RBM7 (ENSPPYG00000003894) #18	ENSPPYG00000003893 #17	NNMT (ENSPPYG00000003892) #16	ZBTB16 (ENSPPYG00000003891) #15	HTR3A (ENSPPYG00000003890) #14	HTR3B (ENSPPYG00000003889) #13	USP28 (ENSPPYG00000003888) #12	ZW10 (ENSPPYG00000003887) #11	TMPRSS5 (ENSPPYG00000003886) #10	DRD2 (ENSPPYG00000003885) #8	ANKK1 (ENSPPYG00000032703) #7	TTC12 (ENSPPYG00000003884)	NCAM1 (ENSPPYG00000003883)	PLET1 (ENSPPYG00000003881)
Gibbon	MODERN SPECIES	5	RNF214 (ENSNLEG00000007341) #35	PCSK7 (ENSNLEG00000007340) #34	TAGLN (ENSNLEG00000007339) #33	SIDT2 (ENSNLEG00000007338) #32	PAFAH1B2 (ENSNLEG00000032420) #31	SIK3 (ENSNLEG00000007336) #30	APOA1 (ENSNLEG00000007335) #29	APOC3 (ENSNLEG00000007334) #28	APOA4 (ENSNLEG00000007332) #27	APOA5 (ENSNLEG00000007331) #26	ZPR1 (ENSNLEG00000007330) #25	BUD13 (ENSNLEG00000007329) #24	CADM1 (ENSNLEG00000029493) #23	NXPE2 (ENSNLEG00000007327) #22	NXPE4 (ENSNLEG00000007326) #21	NXPE1 (ENSNLEG00000007325) #20	REXO2 (ENSNLEG00000029745) #19	RBM7 (ENSNLEG00000029494) #18	ENSNLEG00000029308 #17	NNMT (ENSNLEG00000007321) #16	ZBTB16 (ENSNLEG00000007319) #15	HTR3A (ENSNLEG00000007317) #14	HTR3B (ENSNLEG00000007316) #13	USP28 (ENSNLEG00000007313) #12	CLDN25 (ENSNLEG00000007312)	ZW10 (ENSNLEG00000032579) #11	TMPRSS5 (ENSNLEG00000007310) #10	DRD2 (ENSNLEG00000007309) #8	ANKK1 (ENSNLEG00000007308) #7	TTC12 (ENSNLEG00000007306)	NCAM1 (ENSNLEG00000007301)
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c.a.a #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255.o #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000164522.c.b #9	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cebidae	ANCESTRAL SPECIES		ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c.a.a #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255.o #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000164522.c.b #9	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c.a.a #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255.o #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000164522.c.b #9	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Bolivian squirrel monkey	MODERN SPECIES	50	ENSSBOG00000031628	ENSSBOG00000018305	SIK3 (ENSSBOG00000033875) #30	ENSSBOG00000019734	APOA1 (ENSSBOG00000027691) #29	APOC3 (ENSSBOG00000029645) #28	APOA4 (ENSSBOG00000034589) #27	APOA5 (ENSSBOG00000034615) #26	ZPR1 (ENSSBOG00000018045) #25	BUD13 (ENSSBOG00000033988) #24	ENSSBOG00000034680	CADM1 (ENSSBOG00000035201) #23	ENSSBOG00000034681	NXPE2 (ENSSBOG00000022260) #22	NXPE4 (ENSSBOG00000023862) #21	NXPE1 (ENSSBOG00000027065) #20	REXO2 (ENSSBOG00000028651) #19	RBM7 (ENSSBOG00000027830) #18	ENSSBOG00000030536	NNMT (ENSSBOG00000032617) #16	ZBTB16 (ENSSBOG00000032604) #15	HTR3A (ENSSBOG00000018920) #14	HTR3B (ENSSBOG00000026069) #13	USP28 (ENSSBOG00000028488) #12	ZW10 (ENSSBOG00000006598) #11	TMPRSS5 (ENSSBOG00000021869) #10	ENSSBOG00000003976 #9	DRD2 (ENSSBOG00000004012) #8	ANKK1 (ENSSBOG00000020263) #7	TTC12 (ENSSBOG00000028986)	NCAM1 (ENSSBOG00000024448)
Capuchin	MODERN SPECIES	28	RNF214 (ENSCCAG00000037316) #35	PCSK7 (ENSCCAG00000036429) #34	ENSCCAG00000029473 #33	SIDT2 (ENSCCAG00000027512) #32	PAFAH1B2 (ENSCCAG00000034687) #31	ENSCCAG00000036119 #30	APOA1 (ENSCCAG00000024621) #29	APOC3 (ENSCCAG00000001237) #28	APOA4 (ENSCCAG00000026719) #27	APOA5 (ENSCCAG00000033034) #26	ZPR1 (ENSCCAG00000028716) #25	BUD13 (ENSCCAG00000024422) #24	CADM1 (ENSCCAG00000032479) #23	NXPE2 (ENSCCAG00000016890) #22	NXPE4 (ENSCCAG00000027643) #21	NXPE1 (ENSCCAG00000032412) #20	REXO2 (ENSCCAG00000034979) #19	RBM7 (ENSCCAG00000036534) #18	C11orf71 (ENSCCAG00000033433) #17	NNMT (ENSCCAG00000019545) #16	ZBTB16 (ENSCCAG00000001377) #15	HTR3A (ENSCCAG00000022462) #14	HTR3B (ENSCCAG00000035522) #13	ENSCCAG00000032064 #12	ZW10 (ENSCCAG00000020627) #11	TMPRSS5 (ENSCCAG00000021473) #10	ENSCCAG00000028022 #9	DRD2 (ENSCCAG00000019854) #8	ANKK1 (ENSCCAG00000037007) #7	TTC12 (ENSCCAG00000034913)	NCAM1 (ENSCCAG00000035823)
Marmoset	MODERN SPECIES	2	RNF214 (ENSCJAG00000012793) #35	PCSK7 (ENSCJAG00000012763) #34	TAGLN (ENSCJAG00000012755) #33	SIDT2 (ENSCJAG00000012713) #32	PAFAH1B2 (ENSCJAG00000012698) #31	ENSCJAG00000074301	SIK3 (ENSCJAG00000012659) #30	APOA1 (ENSCJAG00000012644) #29	APOC3 (ENSCJAG00000012639) #28	APOA4 (ENSCJAG00000070367) #27	APOA5 (ENSCJAG00000012611) #26	ZPR1 (ENSCJAG00000012583) #25	BUD13 (ENSCJAG00000012570) #24	CADM1 (ENSCJAG00000012501) #23	NXPE2 (ENSCJAG00000012491) #22	NXPE1 (ENSCJAG00000045094) #20	ENSCJAG00000069594	REXO2 (ENSCJAG00000012434) #19	ENSCJAG00000084583	RBM7 (ENSCJAG00000011949) #18	C11orf71 (ENSCJAG00000011958) #17	NNMT (ENSCJAG00000011964) #16	ZBTB16 (ENSCJAG00000011978) #15	HTR3A (ENSCJAG00000012009) #14	HTR3B (ENSCJAG00000012037) #13	USP28 (ENSCJAG00000012053) #12	ZW10 (ENSCJAG00000012168) #11	TMPRSS5 (ENSCJAG00000012228) #10	ENSCJAG00000051295	ENSCJAG00000080815	DRD2 (ENSCJAG00000012246) #8
Mas night monkey	MODERN SPECIES	527	ENSANAG00000038268 #33	SIDT2 (ENSANAG00000031713) #32	PAFAH1B2 (ENSANAG00000023275) #31	ENSANAG00000035938	ENSANAG00000025519	SIK3 (ENSANAG00000037756) #30	APOA1 (ENSANAG00000034411) #29	APOC3 (ENSANAG00000033515) #28	APOA4 (ENSANAG00000033961) #27	APOA5 (ENSANAG00000030524) #26	ZPR1 (ENSANAG00000026351) #25	BUD13 (ENSANAG00000035220) #24	CADM1 (ENSANAG00000022822) #23	ENSANAG00000006922	NXPE2 (ENSANAG00000022914) #22	NXPE1 (ENSANAG00000023027) #20	ENSANAG00000020834 #19	ENSANAG00000031879 #18	C11orf71 (ENSANAG00000034041) #17	NNMT (ENSANAG00000032401) #16	ZBTB16 (ENSANAG00000029870) #15	HTR3A (ENSANAG00000016907) #14	HTR3B (ENSANAG00000025924) #13	USP28 (ENSANAG00000024006) #12	ZW10 (ENSANAG00000033796) #11	TMPRSS5 (ENSANAG00000022545) #10	ENSANAG00000028923 #9	DRD2 (ENSANAG00000031378) #8	ANKK1 (ENSANAG00000029122) #7	TTC12 (ENSANAG00000035548)	NCAM1 (ENSANAG00000029943)
Tarsier	MODERN SPECIES	4566														NXPE2 (ENSTSYG00000006186) #22	NXPE4 (ENSTSYG00000010973) #21	NXPE1 (ENSTSYG00000004695) #20
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Lemuriformes_a	ANCESTRAL SPECIES	22	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000002752.x
Greater bamboo lemur	MODERN SPECIES	351	PCSK7 (ENSPSMG00000000646) #34	TAGLN (ENSPSMG00000000551) #33	SIDT2 (ENSPSMG00000000504) #32	PAFAH1B2 (ENSPSMG00000000427) #31	SIK3 (ENSPSMG00000000370) #30	APOA1 (ENSPSMG00000000233) #29	APOC3 (ENSPSMG00000000205) #28	APOA4 (ENSPSMG00000000186) #27	ENSPSMG00000000176	APOA5 (ENSPSMG00000000169) #26	ENSPSMG00000000147 #25	ENSPSMG00000000094	BUD13 (ENSPSMG00000000086) #24	CADM1 (ENSPSMG00000023087) #23	NXPE4 (ENSPSMG00000022880) #21	NXPE1 (ENSPSMG00000022873) #20	REXO2 (ENSPSMG00000022850) #19	RBM7 (ENSPSMG00000022804) #18	C11orf71 (ENSPSMG00000022783) #17	NNMT (ENSPSMG00000022778) #16	ZBTB16 (ENSPSMG00000022771) #15	HTR3A (ENSPSMG00000022757) #14	ENSPSMG00000022726	HTR3B (ENSPSMG00000022720) #13	USP28 (ENSPSMG00000022691) #12	CLDN25 (ENSPSMG00000022639)	ZW10 (ENSPSMG00000022631) #11	TMPRSS5 (ENSPSMG00000022572) #10	DRD2 (ENSPSMG00000022465) #8	TTC12 (ENSPSMG00000022371)	NCAM1 (ENSPSMG00000021739)
Coquerels sifaka	MODERN SPECIES	760														CADM1 (ENSPCOG00000028587) #23	NXPE4 (ENSPCOG00000017129) #21	NXPE1 (ENSPCOG00000016490) #20	REXO2 (ENSPCOG00000027639) #19	ENSPCOG00000022719 #18	C11orf71 (ENSPCOG00000015231) #17	NNMT (ENSPCOG00000027693) #16	ZBTB16 (ENSPCOG00000004404) #15	HTR3A (ENSPCOG00000025438) #14	HTR3B (ENSPCOG00000013139) #13	ENSPCOG00000019270	USP28 (ENSPCOG00000018279) #12	ZW10 (ENSPCOG00000020599) #11	TMPRSS5 (ENSPCOG00000006628) #10	DRD2 (ENSPCOG00000007514) #8	TTC12 (ENSPCOG00000024368)	NCAM1 (ENSPCOG00000022925)	PTS (ENSPCOG00000024186)
Mouse lemur	MODERN SPECIES	27	TAGLN (ENSMICG00000002371) #33	SIDT2 (ENSMICG00000002357) #32	PAFAH1B2 (ENSMICG00000032949) #31	ENSMICG00000045255	SIK3 (ENSMICG00000002343) #30	APOA1 (ENSMICG00000002339) #29	APOC3 (ENSMICG00000047019) #28	APOA4 (ENSMICG00000002332) #27	APOA5 (ENSMICG00000046852) #26	ENSMICG00000002322 #25	BUD13 (ENSMICG00000002320) #24	CADM1 (ENSMICG00000002734) #23	ENSMICG00000032449	NXPE4 (ENSMICG00000004444) #21	ENSMICG00000048026	NXPE1 (ENSMICG00000014692) #20	REXO2 (ENSMICG00000010094) #19	RBM7 (ENSMICG00000042981) #18	C11orf71 (ENSMICG00000010085) #17	NNMT (ENSMICG00000027668) #16	ZBTB16 (ENSMICG00000010072) #15	HTR3A (ENSMICG00000010063) #14	ENSMICG00000043320	ENSMICG00000012975	ENSMICG00000047604	ENSMICG00000009837	AAMDC (ENSMICG00000000300)	ENSMICG00000045144	ENSMICG00000045490	ENSMICG00000012870	ENSMICG00000046158
Bushbaby	MODERN SPECIES	201						SIK3 (ENSOGAG00000026497) #30	APOA1 (ENSOGAG00000026815) #29	APOC3 (ENSOGAG00000009983) #28	APOA4 (ENSOGAG00000029288) #27	APOA5 (ENSOGAG00000025290) #26	ZPR1 (ENSOGAG00000009977) #25	BUD13 (ENSOGAG00000009973) #24	CADM1 (ENSOGAG00000002041) #23	NXPE2 (ENSOGAG00000013432) #22	NXPE4 (ENSOGAG00000013423) #21	NXPE1 (ENSOGAG00000013418) #20	REXO2 (ENSOGAG00000016860) #19	RBM7 (ENSOGAG00000016857) #18	C11orf71 (ENSOGAG00000016855) #17	NNMT (ENSOGAG00000031697) #16	ZBTB16 (ENSOGAG00000033673) #15	HTR3A (ENSOGAG00000004319) #14	HTR3B (ENSOGAG00000004318) #13	USP28 (ENSOGAG00000004313) #12	CLDN25 (ENSOGAG00000024445)	ZW10 (ENSOGAG00000011584) #11	TMPRSS5 (ENSOGAG00000026392) #10	ENSOGAG00000007401	DRD2 (ENSOGAG00000006407) #8	TTC12 (ENSOGAG00000006402)	NCAM1 (ENSOGAG00000006401)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Glires	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Muroidea	ANCESTRAL SPECIES	29	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Northern American deer mouse	MODERN SPECIES	20	Sidt2 (ENSPEMG00000021149) #32	Pafah1b2 (ENSPEMG00000027983) #31	Sik3 (ENSPEMG00000006295) #30	Apoa1 (ENSPEMG00000011979) #29	Apoc3 (ENSPEMG00000011253) #28	Apoa4 (ENSPEMG00000015480) #27	ENSPEMG00000025005	Apoa5 (ENSPEMG00000008037) #26	ENSPEMG00000010769 #25	Bud13 (ENSPEMG00000016113) #24	4931429L15Rik (ENSPEMG00000013164)	ENSPEMG00000014812	Cadm1 (ENSPEMG00000001825) #23	Nxpe2 (ENSPEMG00000013012) #22	Nxpe4 (ENSPEMG00000008500) #21	ENSPEMG00000028974 #20	Rexo2 (ENSPEMG00000001421) #19	ENSPEMG00000027574 #18	Gm5617 (ENSPEMG00000027308) #17	Nnmt (ENSPEMG00000010869) #16	Zbtb16 (ENSPEMG00000008489) #15	Htr3a (ENSPEMG00000011767) #14	Htr3b (ENSPEMG00000011245) #13	Usp28 (ENSPEMG00000007642) #12	ENSPEMG00000025300	Zw10 (ENSPEMG00000020641) #11	Tmprss5 (ENSPEMG00000020635) #10	Drd2 (ENSPEMG00000012651) #8	Ankk1 (ENSPEMG00000011950) #7	Ttc12 (ENSPEMG00000011009)	Ncam1 (ENSPEMG00000005268)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Chinese hamster chok1gshd	MODERN SPECIES	284	Pcsk7 (ENSCGRG00001003140) #34	Tagln (ENSCGRG00001023407) #33	Sidt2 (ENSCGRG00001019094) #32	ENSCGRG00001018542 #31	Sik3 (ENSCGRG00001003605) #30	Apoa1 (ENSCGRG00001024204) #29	Apoc3 (ENSCGRG00001005242) #28	Apoa4 (ENSCGRG00001024960) #27	Apoa5 (ENSCGRG00001024502) #26	Zpr1 (ENSCGRG00001013967) #25	Bud13 (ENSCGRG00001019626) #24	ENSCGRG00001004852	Cadm1 (ENSCGRG00001023561) #23	ENSCGRG00001013462 #22	Nxpe4 (ENSCGRG00001011592) #21	ENSCGRG00001022529 #20	ENSCGRG00001019814 #19	Rbm7 (ENSCGRG00001019236) #18	Gm5617 (ENSCGRG00001001466) #17	Nnmt (ENSCGRG00001013317) #16	Zbtb16 (ENSCGRG00001024806) #15	Htr3a (ENSCGRG00001002154) #14	Htr3b (ENSCGRG00001023267) #13	Usp28 (ENSCGRG00001023338) #12	ENSCGRG00001000915	Zw10 (ENSCGRG00001023701) #11	Tmprss5 (ENSCGRG00001023126) #10	ENSCGRG00001012459	Drd2 (ENSCGRG00001020389) #8	Ankk1 (ENSCGRG00001015626) #7	Ttc12 (ENSCGRG00001017552)
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00900000143181
Mus	ANCESTRAL SPECIES	4	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00900000143181
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00860000135752	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00860000135752	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Mus_C	ANCESTRAL SPECIES	8	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00860000135752	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Steppe mouse	MODERN SPECIES	3372	Apoa1 (ENSMSIG00000011153) #29	ENSMSIG00000011165	Apoc3 (ENSMSIG00000011168) #28	Apoa4 (ENSMSIG00000011179) #27	ENSMSIG00000011188	Apoa5 (ENSMSIG00000011204) #26	Zpr1 (ENSMSIG00000011232) #25	Bud13 (ENSMSIG00000011279) #24	4931429L15Rik (ENSMSIG00000011321)	ENSMSIG00000011446	ENSMSIG00000011463	Cadm1 (ENSMSIG00000011500) #23	ENSMSIG00000012512	Nxpe2 (ENSMSIG00000012518) #22	Nxpe4 (ENSMSIG00000012534) #21	ENSMSIG00000012577 #20	Rexo2 (ENSMSIG00000012688) #19	Rbm7 (ENSMSIG00000012760) #18	Nnmt (ENSMSIG00000012794) #16	Zbtb16 (ENSMSIG00000012819) #15	Htr3a (ENSMSIG00000012846) #14	Htr3b (ENSMSIG00000012863) #13	Usp28 (ENSMSIG00000012895) #12	ENSMSIG00000013079	Zw10 (ENSMSIG00000013094) #11	Tmprss5 (ENSMSIG00000013179) #10	ENSMSIG00000013481	Drd2 (ENSMSIG00000013494) #8	Ankk1 (ENSMSIG00000013556) #7	Ttc12 (ENSMSIG00000013591)	Ncam1 (ENSMSIG00000013650)
Ryukyu mouse	MODERN SPECIES	18	Pcsk7 (MGP_CAROLIEiJ_G0032150) #34	Tagln (MGP_CAROLIEiJ_G0032151) #33	Sidt2 (MGP_CAROLIEiJ_G0032152) #32	Pafah1b2 (MGP_CAROLIEiJ_G0032153) #31	Sik3 (MGP_CAROLIEiJ_G0032154) #30	Apoa1 (MGP_CAROLIEiJ_G0032155) #29	Apoc3 (MGP_CAROLIEiJ_G0032156) #28	Apoa4 (MGP_CAROLIEiJ_G0032157) #27	Apoa5 (MGP_CAROLIEiJ_G0032158) #26	Zpr1 (MGP_CAROLIEiJ_G0032159) #25	Bud13 (MGP_CAROLIEiJ_G0032160) #24	4931429L15Rik (MGP_CAROLIEiJ_G0032161)	Cadm1 (MGP_CAROLIEiJ_G0032162) #23	Nxpe2 (MGP_CAROLIEiJ_G0032163) #22	Nxpe4 (MGP_CAROLIEiJ_G0032164) #21	MGP_CAROLIEiJ_G0032165 #20	Rexo2 (MGP_CAROLIEiJ_G0032166) #19	Rbm7 (MGP_CAROLIEiJ_G0032167) #18	Gm5617 (MGP_CAROLIEiJ_G0032168) #17	Nnmt (MGP_CAROLIEiJ_G0032169) #16	Zbtb16 (MGP_CAROLIEiJ_G0032170) #15	Htr3a (MGP_CAROLIEiJ_G0032171) #14	Htr3b (MGP_CAROLIEiJ_G0032172) #13	Usp28 (MGP_CAROLIEiJ_G0032173) #12	Zw10 (MGP_CAROLIEiJ_G0032174) #11	Tmprss5 (MGP_CAROLIEiJ_G0032175) #10	MGP_CAROLIEiJ_G0032176	Drd2 (MGP_CAROLIEiJ_G0032177) #8	Ankk1 (MGP_CAROLIEiJ_G0032178) #7	Ttc12 (MGP_CAROLIEiJ_G0032179)	Ncam1 (MGP_CAROLIEiJ_G0032180)
Rat	MODERN SPECIES	18	ENSRNOG00000067804	Sik3 (ENSRNOG00000045931) #30	ENSRNOG00000064478	Apoa1 (ENSRNOG00000045679) #29	Apoc3 (ENSRNOG00000047503) #28	Apoa4 (ENSRNOG00000055909) #27	AABR07073400.1 (ENSRNOG00000059084)	Apoa5 (ENSRNOG00000018436) #26	Zpr1 (ENSRNOG00000018481) #25	Bud13 (ENSRNOG00000018665) #24	LOC500990 (ENSRNOG00000038867)	AC135409.1 (ENSRNOG00000038864)	Cadm1 (ENSRNOG00000018778) #23	Nxpe2 (ENSRNOG00000027847) #22	Nxpe4 (ENSRNOG00000070472) #21	Nxpe1 (ENSRNOG00000027730) #20	Rexo2 (ENSRNOG00000018939) #19	Rbm7 (ENSRNOG00000005710) #18	C8h11orf71 (ENSRNOG00000005918) #17	Nnmt (ENSRNOG00000005930) #16	Zbtb16 (ENSRNOG00000029980) #15	Htr3a (ENSRNOG00000006595) #14	Htr3b (ENSRNOG00000006920) #13	Usp28 (ENSRNOG00000007325) #12	Cldn25 (ENSRNOG00000057454)	Zw10 (ENSRNOG00000054479) #11	Tmprss5 (ENSRNOG00000008058) #10	Drd2 (ENSRNOG00000008428) #8	Ankk1 (ENSRNOG00000025037) #7	Ttc12 (ENSRNOG00000008595)	Ncam1 (ENSRNOG00000031890)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c #20
Naked mole-rat female	MODERN SPECIES	24	SIDT2 (ENSHGLG00000013525) #32	PAFAH1B2 (ENSHGLG00000038396) #31	ENSHGLG00000036675	SIK3 (ENSHGLG00000018892) #30	ENSHGLG00000019472	Apoa1 (ENSHGLG00000043209) #29	APOC3 (ENSHGLG00000043547) #28	APOA4 (ENSHGLG00000049508) #27	APOA5 (ENSHGLG00000015377) #26	ZPR1 (ENSHGLG00000014088) #25	BUD13 (ENSHGLG00000013562) #24	ENSHGLG00000001469	CADM1 (ENSHGLG00000015066) #23	NXPE2 (ENSHGLG00000046949) #22	NXPE4 (ENSHGLG00000013847) #21	NXPE1 (ENSHGLG00000044726) #20	ENSHGLG00000007101	ENSHGLG00000017602	REXO2 (ENSHGLG00000039307) #19	ENSHGLG00000043710 #18	ENSHGLG00000033388	ENSHGLG00000015185 #16	ZBTB16 (ENSHGLG00000007562) #15	HTR3A (ENSHGLG00000006163) #14	HTR3B (ENSHGLG00000045380) #13	USP28 (ENSHGLG00000003749) #12	CLDN25 (ENSHGLG00000014340)	ZW10 (ENSHGLG00000013323) #11	TMPRSS5 (ENSHGLG00000018841) #10	ENSHGLG00000007066	ENSHGLG00000045960
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Marmotini	DUPLICATION
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h.b #21	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Marmotini_b	ANCESTRAL SPECIES	113													ENSGT00950000182866.D.c.h.a #21	ENSGT00950000182866.D.c.g.c.d #20	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Arctic ground squirrel	MODERN SPECIES	104												ENSUPAG00010021294 #21	ENSUPAG00010021275 #20	ENSUPAG00010021266 #20	ENSUPAG00010021260 #20	ENSUPAG00010021231 #20	REXO2 (ENSUPAG00010021187) #19	RBM7 (ENSUPAG00010021174) #18	C11orf71 (ENSUPAG00010021172) #17	NNMT (ENSUPAG00010021165) #16	ZBTB16 (ENSUPAG00010021150) #15	HTR3A (ENSUPAG00010021143) #14	HTR3B (ENSUPAG00010021131) #13	USP28 (ENSUPAG00010021015) #12	CLDN25 (ENSUPAG00010020995)	ENSUPAG00010020992	ZW10 (ENSUPAG00010020979) #11	TMPRSS5 (ENSUPAG00010020923) #10	DRD2 (ENSUPAG00010020916) #8	TTC12 (ENSUPAG00010020896)	NCAM1 (ENSUPAG00010020818)
Alpin marmot	MODERN SPECIES	25	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12	CLDN25 (ENSMMMG00000023330)	ZW10 (ENSMMMG00000023333) #11	TMPRSS5 (ENSMMMG00000023341) #10	DRD2 (ENSMMMG00000023385) #8	ENSMMMG00000023386	TTC12 (ENSMMMG00000023390)	NCAM1 (ENSMMMG00000023398)
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h.b #21	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Alpin marmot	MODERN SPECIES	25	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12	CLDN25 (ENSMMMG00000023330)	ZW10 (ENSMMMG00000023333) #11	TMPRSS5 (ENSMMMG00000023341) #10	DRD2 (ENSMMMG00000023385) #8	ENSMMMG00000023386	TTC12 (ENSMMMG00000023390)
Marmotini_b	ANCESTRAL SPECIES	113														ENSGT00950000182866.D.c.h.a #21	ENSGT00950000182866.D.c.g.c.d #20	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Arctic ground squirrel	MODERN SPECIES	104													ENSUPAG00010021294 #21	ENSUPAG00010021275 #20	ENSUPAG00010021266 #20	ENSUPAG00010021260 #20	ENSUPAG00010021231 #20	REXO2 (ENSUPAG00010021187) #19	RBM7 (ENSUPAG00010021174) #18	C11orf71 (ENSUPAG00010021172) #17	NNMT (ENSUPAG00010021165) #16	ZBTB16 (ENSUPAG00010021150) #15	HTR3A (ENSUPAG00010021143) #14	HTR3B (ENSUPAG00010021131) #13	USP28 (ENSUPAG00010021015) #12	CLDN25 (ENSUPAG00010020995)	ENSUPAG00010020992	ZW10 (ENSUPAG00010020979) #11	TMPRSS5 (ENSUPAG00010020923) #10	DRD2 (ENSUPAG00010020916) #8	TTC12 (ENSUPAG00010020896)
Marmotini	ANCESTRAL SPECIES	185															ENSGT00950000182866.D.c.h.a #21	ENSGT00950000182866.D.c.g.c.d #20
Alpin marmot	DUPLICATION
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	25	TAGLN (ENSMMMG00000022913) #33	SIDT2 (ENSMMMG00000022918) #32	PAFAH1B2 (ENSMMMG00000022949) #31	SIK3 (ENSMMMG00000022956) #30	APOA1 (ENSMMMG00000022965) #29	APOC3 (ENSMMMG00000022968) #28	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12
Alpin marmot	MODERN SPECIES	25	PAFAH1B2 (ENSMMMG00000022949) #31	SIK3 (ENSMMMG00000022956) #30	APOA1 (ENSMMMG00000022965) #29	APOC3 (ENSMMMG00000022968) #28	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12	CLDN25 (ENSMMMG00000023330)	ZW10 (ENSMMMG00000023333) #11
Alpin marmot	MODERN SPECIES	25	APOA1 (ENSMMMG00000022965) #29	APOC3 (ENSMMMG00000022968) #28	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12	CLDN25 (ENSMMMG00000023330)	ZW10 (ENSMMMG00000023333) #11	TMPRSS5 (ENSMMMG00000023341) #10	DRD2 (ENSMMMG00000023385) #8
Marmotini_b	ANCESTRAL SPECIES	113															ENSGT00950000182866.D.c.h.a #21	ENSGT00950000182866.D.c.g.c.d #20	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758
Arctic ground squirrel	DUPLICATION
Arctic ground squirrel	MODERN SPECIES	104														ENSUPAG00010021294 #21	ENSUPAG00010021275 #20	ENSUPAG00010021266 #20	ENSUPAG00010021260 #20	ENSUPAG00010021231 #20	REXO2 (ENSUPAG00010021187) #19	RBM7 (ENSUPAG00010021174) #18	C11orf71 (ENSUPAG00010021172) #17	NNMT (ENSUPAG00010021165) #16	ZBTB16 (ENSUPAG00010021150) #15	HTR3A (ENSUPAG00010021143) #14	HTR3B (ENSUPAG00010021131) #13	USP28 (ENSUPAG00010021015) #12	CLDN25 (ENSUPAG00010020995)	ENSUPAG00010020992	ZW10 (ENSUPAG00010020979) #11	TMPRSS5 (ENSUPAG00010020923) #10	DRD2 (ENSUPAG00010020916) #8
Arctic ground squirrel	MODERN SPECIES	104															ENSUPAG00010021294 #21	ENSUPAG00010021275 #20	ENSUPAG00010021266 #20	ENSUPAG00010021260 #20	ENSUPAG00010021231 #20	REXO2 (ENSUPAG00010021187) #19	RBM7 (ENSUPAG00010021174) #18	C11orf71 (ENSUPAG00010021172) #17	NNMT (ENSUPAG00010021165) #16	ZBTB16 (ENSUPAG00010021150) #15	HTR3A (ENSUPAG00010021143) #14	HTR3B (ENSUPAG00010021131) #13	USP28 (ENSUPAG00010021015) #12	CLDN25 (ENSUPAG00010020995)	ENSUPAG00010020992	ZW10 (ENSUPAG00010020979) #11	TMPRSS5 (ENSUPAG00010020923) #10
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	2	PCSK7 (ENSSVLG00005022755) #34	TAGLN (ENSSVLG00005022723) #33	SIDT2 (ENSSVLG00005022651) #32	PAFAH1B2 (ENSSVLG00005022556) #31	SIK3 (ENSSVLG00005022246) #30	APOA1 (ENSSVLG00005022170) #29	APOC3 (ENSSVLG00005022119) #28	APOA4 (ENSSVLG00005022074) #27	APOA5 (ENSSVLG00005022035) #26	ENSSVLG00005021926 #25	BUD13 (ENSSVLG00005021901) #24	CADM1 (ENSSVLG00005021385) #23	NXPE2 (ENSSVLG00005021221) #22	NXPE4 (ENSSVLG00005021122) #21	ENSSVLG00005021093	ENSSVLG00005020876 #20	ENSSVLG00005020642 #20	ENSSVLG00005020557 #20	REXO2 (ENSSVLG00005020422) #19	RBM7 (ENSSVLG00005020354) #18	C11orf71 (ENSSVLG00005020339) #17	ENSSVLG00005020322	NNMT (ENSSVLG00005020280) #16	ZBTB16 (ENSSVLG00005020211) #15	HTR3A (ENSSVLG00005019864) #14	HTR3B (ENSSVLG00005019693) #13	USP28 (ENSSVLG00005019534) #12	CLDN25 (ENSSVLG00005019372)	ZW10 (ENSSVLG00005019311) #11	TMPRSS5 (ENSSVLG00005018744) #10	DRD2 (ENSSVLG00005018544) #8
Eurasian red squirrel	MODERN SPECIES	2	TAGLN (ENSSVLG00005022723) #33	SIDT2 (ENSSVLG00005022651) #32	PAFAH1B2 (ENSSVLG00005022556) #31	SIK3 (ENSSVLG00005022246) #30	APOA1 (ENSSVLG00005022170) #29	APOC3 (ENSSVLG00005022119) #28	APOA4 (ENSSVLG00005022074) #27	APOA5 (ENSSVLG00005022035) #26	ENSSVLG00005021926 #25	BUD13 (ENSSVLG00005021901) #24	CADM1 (ENSSVLG00005021385) #23	NXPE2 (ENSSVLG00005021221) #22	NXPE4 (ENSSVLG00005021122) #21	ENSSVLG00005021093	ENSSVLG00005020876 #20	ENSSVLG00005020642 #20	ENSSVLG00005020557 #20	REXO2 (ENSSVLG00005020422) #19	RBM7 (ENSSVLG00005020354) #18	C11orf71 (ENSSVLG00005020339) #17	ENSSVLG00005020322	NNMT (ENSSVLG00005020280) #16	ZBTB16 (ENSSVLG00005020211) #15	HTR3A (ENSSVLG00005019864) #14	HTR3B (ENSSVLG00005019693) #13	USP28 (ENSSVLG00005019534) #12	CLDN25 (ENSSVLG00005019372)	ZW10 (ENSSVLG00005019311) #11	TMPRSS5 (ENSSVLG00005018744) #10	DRD2 (ENSSVLG00005018544) #8	TTC12 (ENSSVLG00005018494)
Eurasian red squirrel	MODERN SPECIES	2	SIDT2 (ENSSVLG00005022651) #32	PAFAH1B2 (ENSSVLG00005022556) #31	SIK3 (ENSSVLG00005022246) #30	APOA1 (ENSSVLG00005022170) #29	APOC3 (ENSSVLG00005022119) #28	APOA4 (ENSSVLG00005022074) #27	APOA5 (ENSSVLG00005022035) #26	ENSSVLG00005021926 #25	BUD13 (ENSSVLG00005021901) #24	CADM1 (ENSSVLG00005021385) #23	NXPE2 (ENSSVLG00005021221) #22	NXPE4 (ENSSVLG00005021122) #21	ENSSVLG00005021093	ENSSVLG00005020876 #20	ENSSVLG00005020642 #20	ENSSVLG00005020557 #20	REXO2 (ENSSVLG00005020422) #19	RBM7 (ENSSVLG00005020354) #18	C11orf71 (ENSSVLG00005020339) #17	ENSSVLG00005020322	NNMT (ENSSVLG00005020280) #16	ZBTB16 (ENSSVLG00005020211) #15	HTR3A (ENSSVLG00005019864) #14	HTR3B (ENSSVLG00005019693) #13	USP28 (ENSSVLG00005019534) #12	CLDN25 (ENSSVLG00005019372)	ZW10 (ENSSVLG00005019311) #11	TMPRSS5 (ENSSVLG00005018744) #10	DRD2 (ENSSVLG00005018544) #8	TTC12 (ENSSVLG00005018494)	NCAM1 (ENSSVLG00005017605)
Lagomorpha	ANCESTRAL SPECIES	702															ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES		ENSOCUG00000037757	ENSOCUG00000033775	NCAM1 (ENSOCUG00000006190)	TTC12 (ENSOCUG00000011625)	DRD2 (ENSOCUG00000011657) #8	TMPRSS5 (ENSOCUG00000027156) #10	ZW10 (ENSOCUG00000007436) #11	CLDN25 (ENSOCUG00000025517)	USP28 (ENSOCUG00000007441) #12	HTR3B (ENSOCUG00000029643) #13	HTR3A (ENSOCUG00000007462) #14	ZBTB16 (ENSOCUG00000007470) #15	C11orf71 (ENSOCUG00000003339) #17	RBM7 (ENSOCUG00000003342) #18	REXO2 (ENSOCUG00000004274) #19	ENSOCUG00000001714 #20	ENSOCUG00000010311 #20	NXPE2 (ENSOCUG00000022316) #22	CADM1 (ENSOCUG00000000864) #23	ENSOCUG00000031805	BUD13 (ENSOCUG00000004615) #24	ZPR1 (ENSOCUG00000004619) #25	APOA5 (ENSOCUG00000004628) #26	ENSOCUG00000030723	APOA4 (ENSOCUG00000011233) #27	ENSOCUG00000027365 #28	APOA1 (ENSOCUG00000010728) #29	SIK3 (ENSOCUG00000011238) #30	PAFAH1B2 (ENSOCUG00000039266) #31	SIDT2 (ENSOCUG00000011955) #32	ENSOCUG00000011970 #33
Rabbit	MODERN SPECIES		PCSK7 (ENSOCUG00000011974) #34	ENSOCUG00000011970 #33	SIDT2 (ENSOCUG00000011955) #32	PAFAH1B2 (ENSOCUG00000039266) #31	SIK3 (ENSOCUG00000011238) #30	APOA1 (ENSOCUG00000010728) #29	ENSOCUG00000027365 #28	APOA4 (ENSOCUG00000011233) #27	ENSOCUG00000030723	APOA5 (ENSOCUG00000004628) #26	ZPR1 (ENSOCUG00000004619) #25	BUD13 (ENSOCUG00000004615) #24	ENSOCUG00000031805	CADM1 (ENSOCUG00000000864) #23	NXPE2 (ENSOCUG00000022316) #22	ENSOCUG00000010311 #20	ENSOCUG00000001714 #20	REXO2 (ENSOCUG00000004274) #19	RBM7 (ENSOCUG00000003342) #18	C11orf71 (ENSOCUG00000003339) #17	ZBTB16 (ENSOCUG00000007470) #15	HTR3A (ENSOCUG00000007462) #14	HTR3B (ENSOCUG00000029643) #13	USP28 (ENSOCUG00000007441) #12	CLDN25 (ENSOCUG00000025517)	ZW10 (ENSOCUG00000007436) #11	TMPRSS5 (ENSOCUG00000027156) #10	DRD2 (ENSOCUG00000011657) #8	TTC12 (ENSOCUG00000011625)	NCAM1 (ENSOCUG00000006190)	ENSOCUG00000033775
Pika	MODERN SPECIES	5168															NXPE4 (ENSOPRG00000012508) #21	ENSOPRG00000012495 #20
Tree shrew	MODERN SPECIES	2437																NXPE1 (ENSTBEG00000017104) #20	REXO2 (ENSTBEG00000017040) #19	ZBTB16 (ENSTBEG00000016863) #15	HTR3A (ENSTBEG00000016717) #14	HTR3B (ENSTBEG00000016653) #13
Atlantogenata	ANCESTRAL SPECIES	40					ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Afrotheria	DUPLICATION
Afrotheria	DUPLICATION
Afrotheria	ANCESTRAL SPECIES	51	ENSGT00940000155354	ENSGT00950000183078.b.a.b.h	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c.i.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17
Afrotheria_a	ANCESTRAL SPECIES	46	ENSGT00950000183078.b.a.b.g	ENSGT00950000183078.b.a.b.h	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c.i.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Elephant	MODERN SPECIES	464	ENSLAFG00000011846	ENSLAFG00000030461	BACE1 (ENSLAFG00000003835) #36	RNF214 (ENSLAFG00000003831) #35	PCSK7 (ENSLAFG00000003821) #34	TAGLN (ENSLAFG00000003818) #33	SIDT2 (ENSLAFG00000030954) #32	SIK3 (ENSLAFG00000023141) #30	APOC3 (ENSLAFG00000030709) #28	APOA4 (ENSLAFG00000002446) #27	APOA5 (ENSLAFG00000010292) #26	ZPR1 (ENSLAFG00000010288) #25	BUD13 (ENSLAFG00000010279) #24	CADM1 (ENSLAFG00000008937) #23	NXPE4 (ENSLAFG00000004906) #21	ENSLAFG00000030693 #20	REXO2 (ENSLAFG00000012451) #19	RBM7 (ENSLAFG00000012444) #18	C11orf71 (ENSLAFG00000012441) #17	NNMT (ENSLAFG00000012440) #16	ZBTB16 (ENSLAFG00000014626) #15	HTR3A (ENSLAFG00000007587) #14	HTR3B (ENSLAFG00000007584) #13	USP28 (ENSLAFG00000017565) #12	ZW10 (ENSLAFG00000001253) #11	ENSLAFG00000025586 #10	ENSLAFG00000031479	DRD2 (ENSLAFG00000006523) #8	ANKK1 (ENSLAFG00000025747) #7	TTC12 (ENSLAFG00000017571)
Tenrec	MODERN SPECIES	195																ENSETEG00000004911 #20
Afrotheria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c.i.b #20
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c.i.b #20
Elephant	MODERN SPECIES	125																ENSLAFG00000028255 #20
Afrotheria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c.j #20
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c.j #20
Hyrax	MODERN SPECIES	93																NXPE1 (ENSPCAG00000014746) #20
Xenarthra	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.g.c #20
Armadillo	MODERN SPECIES	2292				SIK3 (ENSDNOG00000005844) #30	APOA1 (ENSDNOG00000025887) #29	ENSDNOG00000041675 #28	APOA4 (ENSDNOG00000035392) #27	APOA5 (ENSDNOG00000007328) #26	ZPR1 (ENSDNOG00000007318) #25	BUD13 (ENSDNOG00000042988) #24	ENSDNOG00000045803	CADM1 (ENSDNOG00000031312) #23	NXPE2 (ENSDNOG00000024941) #22	ENSDNOG00000044479 #21	ENSDNOG00000046907 #21	NXPE1 (ENSDNOG00000006452) #20	REXO2 (ENSDNOG00000046533) #19	RBM7 (ENSDNOG00000018423) #18	C11orf71 (ENSDNOG00000018420) #17	ZBTB16 (ENSDNOG00000047356) #15	HTR3A (ENSDNOG00000012807) #14	HTR3B (ENSDNOG00000012801) #13	USP28 (ENSDNOG00000003292) #12	CLDN25 (ENSDNOG00000032955)	ZW10 (ENSDNOG00000043541) #11	TMPRSS5 (ENSDNOG00000019650) #10
Sloth	MODERN SPECIES	11473																NXPE1 (ENSCHOG00000001048) #20
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b.a #16	ENSGT00390000011708.a.k.b.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.b #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.a #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b.a #16	ENSGT00390000011708.a.k.b.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.b #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.a #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Diprotodontia	ANCESTRAL SPECIES	62	ENSGT00940000164257	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b.a #16	ENSGT00390000011708.a.k.b.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.b #22	ENSGT00950000182866.D.c.g.a #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Diprotodontia_a	ANCESTRAL SPECIES	60	ENSGT00940000164257	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b.a #16	ENSGT00390000011708.a.k.b.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.b #22	ENSGT00950000182866.D.c.g.a #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36	ENSGT00950000183078.b.a.b
Common wonbat	MODERN SPECIES	755													RBM7 (ENSVURG00010024377) #18	REXO2 (ENSVURG00010024382) #19	ENSVURG00010024389 #22	ENSVURG00010024396 #22	CADM1 (ENSVURG00010024413) #23	ENSVURG00010024441 #24	ZPR1 (ENSVURG00010024449) #25	ENSVURG00010024455 #27	ENSVURG00010024458 #28	ENSVURG00010024460 #29	SIK3 (ENSVURG00010024472) #30	ENSVURG00010024489	PAFAH1B2 (ENSVURG00010024491) #31	SIDT2 (ENSVURG00010024499) #32	TAGLN (ENSVURG00010024508) #33	PCSK7 (ENSVURG00010024512) #34	RNF214 (ENSVURG00010024514) #35	BACE1 (ENSVURG00010024516) #36	ENSVURG00010024522
koala	MODERN SPECIES	35	ENSPCIG00000017450	ANKK1 (ENSPCIG00000009874) #7	DRD2 (ENSPCIG00000036468) #8	ENSPCIG00000011077	TMPRSS5 (ENSPCIG00000011083) #10	ZW10 (ENSPCIG00000011182) #11	USP28 (ENSPCIG00000011192) #12	HTR3B (ENSPCIG00000011207) #13	HTR3A (ENSPCIG00000011216) #14	ZBTB16 (ENSPCIG00000011217) #15	ENSPCIG00000011219 #16	ENSPCIG00000011222 #16	RBM7 (ENSPCIG00000011225) #18	REXO2 (ENSPCIG00000011227) #19	ENSPCIG00000011232 #22	ENSPCIG00000011243 #22	NXPE4 (ENSPCIG00000011259) #21	ENSPCIG00000015270	CADM1 (ENSPCIG00000015235) #23	ENSPCIG00000028567	ENSPCIG00000000146 #24	APOA5 (ENSPCIG00000000091) #26	ENSPCIG00000023964 #27	ENSPCIG00000023963 #28	ENSPCIG00000023961 #29	SIK3 (ENSPCIG00000023946) #30	PAFAH1B2 (ENSPCIG00000015153) #31	SIDT2 (ENSPCIG00000009826) #32	TAGLN (ENSPCIG00000009829) #33	PCSK7 (ENSPCIG00000009832) #34	RNF214 (ENSPCIG00000009834) #35
Wallaby	MODERN SPECIES	10835																ENSMEUG00000005591 #22
Opossum	MODERN SPECIES	3	ANKK1 (ENSMODG00000014205) #7	DRD2 (ENSMODG00000014196) #8	TMPRSS5 (ENSMODG00000014192) #10	ZW10 (ENSMODG00000038051) #11	CLDN25 (ENSMODG00000014183)	USP28 (ENSMODG00000014180) #12	HTR3B (ENSMODG00000014162) #13	HTR3A (ENSMODG00000014158) #14	ZBTB16 (ENSMODG00000014130) #15	ENSMODG00000013921 #16	ENSMODG00000038072 #16	RBM7 (ENSMODG00000013918) #18	ENSMODG00000013913 #19	ENSMODG00000016415	ENSMODG00000029062	ENSMODG00000013881 #22	NXPE4 (ENSMODG00000013878) #21	CADM1 (ENSMODG00000013865) #23	BUD13 (ENSMODG00000013825) #24	ENSMODG00000013816 #25	APOA5 (ENSMODG00000036952) #26	ENSMODG00000013802 #27	ENSMODG00000046429 #28	APOA1 (ENSMODG00000051445) #29	SIK3 (ENSMODG00000013784) #30	PAFAH1B2 (ENSMODG00000013767) #31	SIDT2 (ENSMODG00000013760) #32	TAGLN (ENSMODG00000013744) #33	ENSMODG00000049411	PCSK7 (ENSMODG00000013739) #34	RNF214 (ENSMODG00000013720) #35
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.a #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.b #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.k.b.b #16	ENSGT00390000011708.a.k.b.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.a #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.b #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.k.b.b #16	ENSGT00390000011708.a.k.b.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743
Diprotodontia	ANCESTRAL SPECIES	62	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.a #22	ENSGT00950000182866.D.c.g.b #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.k.b.b #16	ENSGT00390000011708.a.k.b.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743
Wallaby	DUPLICATION
Wallaby	MODERN SPECIES	13700																ENSMEUG00000004625 #22
Wallaby	MODERN SPECIES	736																ENSMEUG00000014570 #22
Diprotodontia_a	ANCESTRAL SPECIES	60	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.a #22	ENSGT00950000182866.D.c.g.b #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.k.b.b #16	ENSGT00390000011708.a.k.b.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743
koala	MODERN SPECIES	35	PCSK7 (ENSPCIG00000009832) #34	TAGLN (ENSPCIG00000009829) #33	SIDT2 (ENSPCIG00000009826) #32	PAFAH1B2 (ENSPCIG00000015153) #31	SIK3 (ENSPCIG00000023946) #30	ENSPCIG00000023961 #29	ENSPCIG00000023963 #28	ENSPCIG00000023964 #27	APOA5 (ENSPCIG00000000091) #26	ENSPCIG00000000146 #24	ENSPCIG00000028567	CADM1 (ENSPCIG00000015235) #23	ENSPCIG00000015270	NXPE4 (ENSPCIG00000011259) #21	ENSPCIG00000011243 #22	ENSPCIG00000011232 #22	REXO2 (ENSPCIG00000011227) #19	RBM7 (ENSPCIG00000011225) #18	ENSPCIG00000011222 #16	ENSPCIG00000011219 #16	ZBTB16 (ENSPCIG00000011217) #15	HTR3A (ENSPCIG00000011216) #14	HTR3B (ENSPCIG00000011207) #13	USP28 (ENSPCIG00000011192) #12	ZW10 (ENSPCIG00000011182) #11	TMPRSS5 (ENSPCIG00000011083) #10	ENSPCIG00000011077	DRD2 (ENSPCIG00000036468) #8	ANKK1 (ENSPCIG00000009874) #7	ENSPCIG00000017450	NCAM1 (ENSPCIG00000019219)
Common wonbat	MODERN SPECIES	755	BACE1 (ENSVURG00010024516) #36	RNF214 (ENSVURG00010024514) #35	PCSK7 (ENSVURG00010024512) #34	TAGLN (ENSVURG00010024508) #33	SIDT2 (ENSVURG00010024499) #32	PAFAH1B2 (ENSVURG00010024491) #31	ENSVURG00010024489	SIK3 (ENSVURG00010024472) #30	ENSVURG00010024460 #29	ENSVURG00010024458 #28	ENSVURG00010024455 #27	ZPR1 (ENSVURG00010024449) #25	ENSVURG00010024441 #24	CADM1 (ENSVURG00010024413) #23	ENSVURG00010024396 #22	ENSVURG00010024389 #22	REXO2 (ENSVURG00010024382) #19	RBM7 (ENSVURG00010024377) #18
Tasmanian devil	MODERN SPECIES	2	BACE1 (ENSSHAG00000010636) #36	RNF214 (ENSSHAG00000010827) #35	PCSK7 (ENSSHAG00000010944) #34	TAGLN (ENSSHAG00000011128) #33	SIDT2 (ENSSHAG00000011203) #32	ENSSHAG00000022660 #31	SIK3 (ENSSHAG00000012560) #30	ENSSHAG00000013226 #29	ENSSHAG00000013306 #27	ENSSHAG00000026300 #28	APOA5 (ENSSHAG00000029383) #26	ZPR1 (ENSSHAG00000007622) #25	ENSSHAG00000024190 #24	CADM1 (ENSSHAG00000015715) #23	ENSSHAG00000004480 #21	ENSSHAG00000005505 #22	REXO2 (ENSSHAG00000008008) #19	RBM7 (ENSSHAG00000008426) #18	ENSSHAG00000026826 #16	ENSSHAG00000029533 #16	ZBTB16 (ENSSHAG00000009882) #15	HTR3A (ENSSHAG00000011944) #14	HTR3B (ENSSHAG00000023064) #13	USP28 (ENSSHAG00000012648) #12	CLDN25 (ENSSHAG00000013021)	ZW10 (ENSSHAG00000013072) #11	ENSSHAG00000024062 #10	DRD2 (ENSSHAG00000014765) #8	ANKK1 (ENSSHAG00000014896) #7	ENSSHAG00000014998	NCAM1 (ENSSHAG00000015333)
Theria	ANCESTRAL SPECIES	15	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743	ENSGT00900000143181
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000164257	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b.a #16	ENSGT00390000011708.a.k.b.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.b #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.a #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000164257	ENSGT00940000162060 #7	ENSGT00940000155539.a.a #8	ENSGT00940000159163 #10	ENSGT00390000016427 #11	ENSGT00940000163940	ENSGT00940000157670 #12	ENSGT00940000158478 #13	ENSGT00940000157705.l #14	ENSGT00940000154616.b #15	ENSGT00390000011708.a.k.b.a #16	ENSGT00390000011708.a.k.b.b #16	ENSGT00870000136493.d #18	ENSGT00390000009255 #19	ENSGT00950000182866.D.c.g.b #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.a #22	ENSGT00940000156093 #23	ENSGT00390000014500 #24	ENSGT00390000005306 #25	ENSGT00950000182929.D #26	ENSGT00950000182929.C #27	ENSGT00390000015395 #28	ENSGT00950000182929.A #29	ENSGT00940000157259 #30	ENSGT00950000183199.a.a #31	ENSGT00390000010091.c #32	ENSGT00940000155162 #33	ENSGT00940000157676 #34	ENSGT00940000159470 #35	ENSGT00940000157786 #36
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000014998	ANKK1 (ENSSHAG00000014896) #7	DRD2 (ENSSHAG00000014765) #8	ENSSHAG00000024062 #10	ZW10 (ENSSHAG00000013072) #11	CLDN25 (ENSSHAG00000013021)	USP28 (ENSSHAG00000012648) #12	HTR3B (ENSSHAG00000023064) #13	HTR3A (ENSSHAG00000011944) #14	ZBTB16 (ENSSHAG00000009882) #15	ENSSHAG00000029533 #16	ENSSHAG00000026826 #16	RBM7 (ENSSHAG00000008426) #18	REXO2 (ENSSHAG00000008008) #19	ENSSHAG00000005505 #22	ENSSHAG00000004480 #21	CADM1 (ENSSHAG00000015715) #23	ENSSHAG00000024190 #24	ZPR1 (ENSSHAG00000007622) #25	APOA5 (ENSSHAG00000029383) #26	ENSSHAG00000026300 #28	ENSSHAG00000013306 #27	ENSSHAG00000013226 #29	SIK3 (ENSSHAG00000012560) #30	ENSSHAG00000022660 #31	SIDT2 (ENSSHAG00000011203) #32	TAGLN (ENSSHAG00000011128) #33	PCSK7 (ENSSHAG00000010944) #34	RNF214 (ENSSHAG00000010827) #35	BACE1 (ENSSHAG00000010636) #36	ENSSHAG00000010066
Diprotodontia	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.h #21
Wallaby	MODERN SPECIES	4430																NXPE4 (ENSMEUG00000000222) #21
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.h #21
koala	MODERN SPECIES	35	BACE1 (ENSPCIG00000009842) #36	RNF214 (ENSPCIG00000009834) #35	PCSK7 (ENSPCIG00000009832) #34	TAGLN (ENSPCIG00000009829) #33	SIDT2 (ENSPCIG00000009826) #32	PAFAH1B2 (ENSPCIG00000015153) #31	SIK3 (ENSPCIG00000023946) #30	ENSPCIG00000023961 #29	ENSPCIG00000023963 #28	ENSPCIG00000023964 #27	APOA5 (ENSPCIG00000000091) #26	ENSPCIG00000000146 #24	ENSPCIG00000028567	CADM1 (ENSPCIG00000015235) #23	ENSPCIG00000015270	NXPE4 (ENSPCIG00000011259) #21	ENSPCIG00000011243 #22	ENSPCIG00000011232 #22	REXO2 (ENSPCIG00000011227) #19	RBM7 (ENSPCIG00000011225) #18	ENSPCIG00000011222 #16	ENSPCIG00000011219 #16	ZBTB16 (ENSPCIG00000011217) #15	HTR3A (ENSPCIG00000011216) #14	HTR3B (ENSPCIG00000011207) #13	USP28 (ENSPCIG00000011192) #12	ZW10 (ENSPCIG00000011182) #11	TMPRSS5 (ENSPCIG00000011083) #10	ENSPCIG00000011077	DRD2 (ENSPCIG00000036468) #8	ANKK1 (ENSPCIG00000009874) #7
Opossum	MODERN SPECIES	3	DRD2 (ENSMODG00000014196) #8	TMPRSS5 (ENSMODG00000014192) #10	ZW10 (ENSMODG00000038051) #11	CLDN25 (ENSMODG00000014183)	USP28 (ENSMODG00000014180) #12	HTR3B (ENSMODG00000014162) #13	HTR3A (ENSMODG00000014158) #14	ZBTB16 (ENSMODG00000014130) #15	ENSMODG00000013921 #16	ENSMODG00000038072 #16	RBM7 (ENSMODG00000013918) #18	ENSMODG00000013913 #19	ENSMODG00000016415	ENSMODG00000029062	ENSMODG00000013881 #22	NXPE4 (ENSMODG00000013878) #21	CADM1 (ENSMODG00000013865) #23	BUD13 (ENSMODG00000013825) #24	ENSMODG00000013816 #25	APOA5 (ENSMODG00000036952) #26	ENSMODG00000013802 #27	ENSMODG00000046429 #28	APOA1 (ENSMODG00000051445) #29	SIK3 (ENSMODG00000013784) #30	PAFAH1B2 (ENSMODG00000013767) #31	SIDT2 (ENSMODG00000013760) #32	TAGLN (ENSMODG00000013744) #33	ENSMODG00000049411	PCSK7 (ENSMODG00000013739) #34	RNF214 (ENSMODG00000013720) #35	BACE1 (ENSMODG00000013692) #36
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000162260.g.b	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000162260.g.b	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000162260.g.b	ENSGT00390000016760.c.a.a.b	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT01090000260175.l	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000162260.g.b	ENSGT00390000016760.c.a.a.b	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Beluga whale	MODERN SPECIES	70	TAGLN (ENSDLEG00000011271) #33	SIDT2 (ENSDLEG00000011177) #32	PAFAH1B2 (ENSDLEG00000011153) #31	SIK3 (ENSDLEG00000010969) #30	APOA1 (ENSDLEG00000010950) #29	APOC3 (ENSDLEG00000010936) #28	APOA4 (ENSDLEG00000010932) #27	ENSDLEG00000010906	APOA5 (ENSDLEG00000010890) #26	ZPR1 (ENSDLEG00000010861) #25	BUD13 (ENSDLEG00000010833) #24	ENSDLEG00000010788	ENSDLEG00000010773	CADM1 (ENSDLEG00000010751) #23	ENSDLEG00000010731 #22	NXPE4 (ENSDLEG00000010684) #21	REXO2 (ENSDLEG00000010666) #19	RBM7 (ENSDLEG00000010595) #18	CUNH11orf71 (ENSDLEG00000010586) #17	NNMT (ENSDLEG00000010577) #16	ENSDLEG00000010562 ##16	ZBTB16 (ENSDLEG00000010544) #15	HTR3A (ENSDLEG00000010503) #14	HTR3B (ENSDLEG00000010470) #13	USP28 (ENSDLEG00000010223) #12	ZW10 (ENSDLEG00000010120) #11	ENSDLEG00000009835 #10	DRD2 (ENSDLEG00000009777) #8	ANKK1 (ENSDLEG00000009758) #7	TTC12 (ENSDLEG00000009663)	NCAM1 (ENSDLEG00000009612)
Narwhal	MODERN SPECIES	314	TAGLN (ENSMMNG00015016866) #33	SIDT2 (ENSMMNG00015016904) #32	PAFAH1B2 (ENSMMNG00015016972) #31	SIK3 (ENSMMNG00015017039) #30	APOA1 (ENSMMNG00015017133) #29	APOC3 (ENSMMNG00015017153) #28	APOA4 (ENSMMNG00015017193) #27	APOA5 (ENSMMNG00015017211) #26	ZPR1 (ENSMMNG00015017240) #25	BUD13 (ENSMMNG00015017316) #24	ENSMMNG00015017372	ENSMMNG00015017454	ENSMMNG00015017467	CADM1 (ENSMMNG00015017567) #23	NXPE2 (ENSMMNG00015017804) #22	NXPE4 (ENSMMNG00015017876) #21	REXO2 (ENSMMNG00015017974) #19	ENSMMNG00015018102 #18	C11orf71 (ENSMMNG00015018124) #17	NNMT (ENSMMNG00015018136) #16	ZBTB16 (ENSMMNG00015018162) #15	HTR3A (ENSMMNG00015018195) #14	HTR3B (ENSMMNG00015018251) #13	USP28 (ENSMMNG00015018348) #12	ZW10 (ENSMMNG00015018560) #11	TMPRSS5 (ENSMMNG00015018667) #10	DRD2 (ENSMMNG00015018913) #8	ANKK1 (ENSMMNG00015018978) #7	TTC12 (ENSMMNG00015019038)	NCAM1 (ENSMMNG00015019426)	ENSMMNG00015019896
Vaquita	MODERN SPECIES	19	PCSK7 (ENSPSNG00000004488) #34	TAGLN (ENSPSNG00000004514) #33	SIDT2 (ENSPSNG00000004574) #32	PAFAH1B2 (ENSPSNG00000004658) #31	SIK3 (ENSPSNG00000004747) #30	APOA1 (ENSPSNG00000004800) #29	APOC3 (ENSPSNG00000004824) #28	APOA4 (ENSPSNG00000004853) #27	APOA5 (ENSPSNG00000004870) #26	ZPR1 (ENSPSNG00000004893) #25	BUD13 (ENSPSNG00000004929) #24	ENSPSNG00000004945	ENSPSNG00000004969	CADM1 (ENSPSNG00000005112) #23	NXPE2 (ENSPSNG00000005419) #22	NXPE4 (ENSPSNG00000005461) #21	ENSPSNG00000005495	REXO2 (ENSPSNG00000005534) #19	ENSPSNG00000005613 #18	NNMT (ENSPSNG00000005634) #16	ZBTB16 (ENSPSNG00000005661) #15	HTR3A (ENSPSNG00000005709) #14	HTR3B (ENSPSNG00000005800) #13	USP28 (ENSPSNG00000005964) #12	ZW10 (ENSPSNG00000006107) #11	TMPRSS5 (ENSPSNG00000006210) #10	DRD2 (ENSPSNG00000006528) #8	ANKK1 (ENSPSNG00000006624) #7	TTC12 (ENSPSNG00000006695)	NCAM1 (ENSPSNG00000006944)	ENSPSNG00000007635
Dolphin	MODERN SPECIES	5821															NXPE2 (ENSTTRG00000014894) #22	NXPE4 (ENSTTRG00000014914) #21	ENSTTRG00000014918 #20	REXO2 (ENSTTRG00000014928) #19
Sperm whale	MODERN SPECIES	7	RNF214 (ENSPCTG00005017809) #35	PCSK7 (ENSPCTG00005017913) #34	TAGLN (ENSPCTG00005017989) #33	SIDT2 (ENSPCTG00005018034) #32	PAFAH1B2 (ENSPCTG00005018144) #31	SIK3 (ENSPCTG00005018268) #30	APOA1 (ENSPCTG00005018711) #29	APOC3 (ENSPCTG00005018770) #28	APOA4 (ENSPCTG00005018831) #27	APOA5 (ENSPCTG00005018861) #26	ZPR1 (ENSPCTG00005018909) #25	BUD13 (ENSPCTG00005018964) #24	ENSPCTG00005019023	CADM1 (ENSPCTG00005019141) #23	NXPE2 (ENSPCTG00005019956) #22	ENSPCTG00005020032 #21	REXO2 (ENSPCTG00005020068) #19	RBM7 (ENSPCTG00005020155) #18	C16H11orf71 (ENSPCTG00005020202) #17	NNMT (ENSPCTG00005020216) #16	HTR3B (ENSPCTG00005020240) #13	USP28 (ENSPCTG00005020403) #12	CLDN25 (ENSPCTG00005020602)	ZW10 (ENSPCTG00005020616) #11	TMPRSS5 (ENSPCTG00005020684) #10	DRD2 (ENSPCTG00005020978) #8	ANKK1 (ENSPCTG00005021065) #7	TTC12 (ENSPCTG00005021195)	NCAM1 (ENSPCTG00005021261)	PTS (ENSPCTG00005021826)	BCO2 (ENSPCTG00005021846)
Blue whale	MODERN SPECIES	19	PCSK7 (ENSBMSG00010013591) #34	TAGLN (ENSBMSG00010013615) #33	SIDT2 (ENSBMSG00010004750) #32	PAFAH1B2 (ENSBMSG00010004772) #31	SIK3 (ENSBMSG00010004803) #30	APOA1 (ENSBMSG00010004863) #29	APOC3 (ENSBMSG00010004871) #28	APOA4 (ENSBMSG00010004880) #27	ENSBMSG00010004884	APOA5 (ENSBMSG00010004890) #26	ZPR1 (ENSBMSG00010004901) #25	BUD13 (ENSBMSG00010004920) #24	ENSBMSG00010004928	CADM1 (ENSBMSG00010004961) #23	NXPE2 (ENSBMSG00010005081) #22	NXPE4 (ENSBMSG00010005100) #21	ENSBMSG00010005113	REXO2 (ENSBMSG00010005137) #19	ENSBMSG00010005152 #18	C11orf71 (ENSBMSG00010005158) #17	NNMT (ENSBMSG00010005165) #16	ENSBMSG00010005174 ##16	ZBTB16 (ENSBMSG00010005183) #15	HTR3A (ENSBMSG00010005211) #14	HTR3B (ENSBMSG00010005243) #13	USP28 (ENSBMSG00010005292) #12	ZW10 (ENSBMSG00010005389) #11	TMPRSS5 (ENSBMSG00010005444) #10	DRD2 (ENSBMSG00010005538) #8	ANKK1 (ENSBMSG00010005556) #7	TTC12 (ENSBMSG00010005577)
Pecora	ANCESTRAL SPECIES	7	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Yarkand deer	MODERN SPECIES		SIDT2 (ENSCHYG00000003103) #32	PAFAH1B2 (ENSCHYG00000003081) #31	ENSCHYG00000003076	SIK3 (ENSCHYG00000002953) #30	ENSCHYG00000002913 #29	ENSCHYG00000002902	APOA4 (ENSCHYG00000002893) #27	APOA5 (ENSCHYG00000002880) #26	ZPR1 (ENSCHYG00000002829) #25	BUD13 (ENSCHYG00000002803) #24	ENSCHYG00000002786	ENSCHYG00000002781	CADM1 (ENSCHYG00000002411) #23	ENSCHYG00000002326	NXPE2 (ENSCHYG00000002317) #22	NXPE4 (ENSCHYG00000002305) #21	REXO2 (ENSCHYG00000002217) #19	RBM7 (ENSCHYG00000002190) #18	C11orf71 (ENSCHYG00000002185) #17	ENSCHYG00000002178 ##16	ZBTB16 (ENSCHYG00000002154) #15	HTR3A (ENSCHYG00000002132) #14	HTR3B (ENSCHYG00000002085) #13	USP28 (ENSCHYG00000001822) #12	CLDN25 (ENSCHYG00000001763)	ZW10 (ENSCHYG00000001731) #11	TMPRSS5 (ENSCHYG00000001706) #10	ENSCHYG00000001689	DRD2 (ENSCHYG00000001660) #8	TTC12 (ENSCHYG00000001569)	NCAM1 (ENSCHYG00000001186)
Percora_a	ANCESTRAL SPECIES	6	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Bovinae	ANCESTRAL SPECIES	21	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT01040000241639	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00900000143181
Bos	ANCESTRAL SPECIES	20	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT01040000241639	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00900000143181
Bos_b	ANCESTRAL SPECIES	19	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT01040000241639	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Cow	MODERN SPECIES	6	PCSK7 (ENSBTAG00000003052) #34	TAGLN (ENSBTAG00000007196) #33	SIDT2 (ENSBTAG00000007192) #32	PAFAH1B2 (ENSBTAG00000005627) #31	SIK3 (ENSBTAG00000015119) #30	APOA1 (ENSBTAG00000002258) #29	APOC3 (ENSBTAG00000012398) #28	ENSBTAG00000049816	APOA4 (ENSBTAG00000019770) #27	APOA5 (ENSBTAG00000019764) #26	ZPR1 (ENSBTAG00000002650) #25	BUD13 (ENSBTAG00000016855) #24	ENSBTAG00000051331	CADM1 (ENSBTAG00000000977) #23	NXPE2 (ENSBTAG00000031362) #22	NXPE4 (ENSBTAG00000005945) #21	REXO2 (ENSBTAG00000005843) #19	RBM7 (ENSBTAG00000008219) #18	C15H11orf71 (ENSBTAG00000008220) #17	ENSBTAG00000008564 ##16	ZBTB16 (ENSBTAG00000011266) #15	HTR3A (ENSBTAG00000010791) #14	HTR3B (ENSBTAG00000031330) #13	USP28 (ENSBTAG00000002323) #12	CLDN25 (ENSBTAG00000039149)	ZW10 (ENSBTAG00000020066) #11	ENSBTAG00000051043 #10	DRD2 (ENSBTAG00000010860) #8	TTC12 (ENSBTAG00000010008)	NCAM1 (ENSBTAG00000005710)	C15H11orf34 (ENSBTAG00000015810)
Hybrid Bos Indicus	MODERN SPECIES	6	SIDT2 (ENSBIXG00005004156) #32	PCSK7 (ENSBIXG00005024173) #34	TAGLN (ENSBIXG00005024100) #33	PAFAH1B2 (ENSBIXG00005004117) #31	SIK3 (ENSBIXG00005024000) #30	APOA1 (ENSBIXG00005004093) #29	ENSBIXG00005023865	APOA4 (ENSBIXG00005023843) #27	ENSBIXG00005023816	APOA5 (ENSBIXG00005023793) #26	ZPR1 (ENSBIXG00005023719) #25	BUD13 (ENSBIXG00005023645) #24	ENSBIXG00005007389	CADM1 (ENSBIXG00005023494) #23	NXPE2 (ENSBIXG00005023143) #22	NXPE4 (ENSBIXG00005023112) #21	REXO2 (ENSBIXG00005023058) #19	RBM7 (ENSBIXG00005022933) #18	C11orf71 (ENSBIXG00005022918) #17	ZBTB16 (ENSBIXG00005022846) #15	HTR3A (ENSBIXG00005022765) #14	HTR3B (ENSBIXG00005022743) #13	USP28 (ENSBIXG00005003888) #12	CLDN25 (ENSBIXG00005007227)	ZW10 (ENSBIXG00005022510) #11	TMPRSS5 (ENSBIXG00005022423) #10	DRD2 (ENSBIXG00005022287) #8	TTC12 (ENSBIXG00005022216)	NCAM1 (ENSBIXG00005022045)	ENSBIXG00005003583	ENSBIXG00005021157
Bos_a	ANCESTRAL SPECIES	15	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT01040000241639	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00900000143181	ENSGT00940000155743
Domestic yak	MODERN SPECIES	4	PAFAH1B2 (ENSBGRG00000025526) #31	SIK3 (ENSBGRG00000025547) #30	APOA1 (ENSBGRG00000003668) #29	APOC3 (ENSBGRG00000003718) #28	APOA4 (ENSBGRG00000003731) #27	ENSBGRG00000003763	APOA5 (ENSBGRG00000003796) #26	ZPR1 (ENSBGRG00000003833) #25	BUD13 (ENSBGRG00000004009) #24	ENSBGRG00000004077	ENSBGRG00000004083	ENSBGRG00000004097	CADM1 (ENSBGRG00000004215) #23	ENSBGRG00000005355	NXPE2 (ENSBGRG00000005371) #22	NXPE4 (ENSBGRG00000005398) #21	ENSBGRG00000005477	REXO2 (ENSBGRG00000005503) #19	RBM7 (ENSBGRG00000005606) #18	C11orf71 (ENSBGRG00000005639) #17	ZBTB16 (ENSBGRG00000005665) #15	HTR3A (ENSBGRG00000005742) #14	HTR3B (ENSBGRG00000005842) #13	USP28 (ENSBGRG00000005908) #12	CLDN25 (ENSBGRG00000006567)	ZW10 (ENSBGRG00000006589) #11	TMPRSS5 (ENSBGRG00000006680) #10	DRD2 (ENSBGRG00000006710) #8	TTC12 (ENSBGRG00000006752)	NCAM1 (ENSBGRG00000006946)	ENSBGRG00000008052
Wild yak	MODERN SPECIES	442																NXPE4 (ENSBMUG00000008355) #21	REXO2 (ENSBMUG00000008321) #19	RBM7 (ENSBMUG00000008305) #18	C11orf71 (ENSBMUG00000008294) #17	ENSBMUG00000008286 ##16	ZBTB16 (ENSBMUG00000008280) #15	HTR3A (ENSBMUG00000008266) #14
American bison	MODERN SPECIES	3365	RNF214 (ENSBBBG00000023813) #35	PCSK7 (ENSBBBG00000023884) #34	TAGLN (ENSBBBG00000023920) #33	SIDT2 (ENSBBBG00000024169) #32	PAFAH1B2 (ENSBBBG00000024229) #31	SIK3 (ENSBBBG00000006365) #30	APOC3 (ENSBBBG00000024468) #28	ENSBBBG00000024485	APOA1 (ENSBBBG00000006800) #29	APOA5 (ENSBBBG00000024548) #26	ZPR1 (ENSBBBG00000024593) #25	BUD13 (ENSBBBG00000024621) #24	ENSBBBG00000000247	CADM1 (ENSBBBG00000006633) #23	NXPE2 (ENSBBBG00000007767) #22	NXPE4 (ENSBBBG00000010911) #21	REXO2 (ENSBBBG00000010953) #19	RBM7 (ENSBBBG00000010981) #18	C11orf71 (ENSBBBG00000001966) #17	ENSBBBG00000008488 ##16	ZBTB16 (ENSBBBG00000010998) #15	HTR3A (ENSBBBG00000001979) #14	HTR3B (ENSBBBG00000011021) #13	USP28 (ENSBBBG00000011084) #12	CLDN25 (ENSBBBG00000011089)	ZW10 (ENSBBBG00000011100) #11	TMPRSS5 (ENSBBBG00000011175) #10	DRD2 (ENSBBBG00000011207) #8	TTC12 (ENSBBBG00000011240)	NCAM1 (ENSBBBG00000011422)	ENSBBBG00000002096
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Rambouillet Sheep	MODERN SPECIES	6	TAGLN (ENSOARG00020003663) #33	SIDT2 (ENSOARG00020003290) #32	PAFAH1B2 (ENSOARG00020003224) #31	SIK3 (ENSOARG00020024821) #30	APOA1 (ENSOARG00020024796) #29	APOC3 (ENSOARG00020024786) #28	APOA4 (ENSOARG00020024777) #27	ENSOARG00020024769	APOA5 (ENSOARG00020024755) #26	ZPR1 (ENSOARG00020024736) #25	BUD13 (ENSOARG00020024712) #24	ENSOARG00020024668	ENSOARG00020024625	ENSOARG00020024615	CADM1 (ENSOARG00020023254) #23	NXPE4 (ENSOARG00020023138) #21	REXO2 (ENSOARG00020023074) #19	RBM7 (ENSOARG00020023023) #18	C11orf71 (ENSOARG00020023012) #17	ENSOARG00020022996 ##16	ZBTB16 (ENSOARG00020022958) #15	HTR3A (ENSOARG00020022887) #14	HTR3B (ENSOARG00020022820) #13	USP28 (ENSOARG00020021860) #12	CLDN25 (ENSOARG00020021788)	ZW10 (ENSOARG00020021659) #11	TMPRSS5 (ENSOARG00020021191) #10	DRD2 (ENSOARG00020021004) #8	TTC12 (ENSOARG00020020523)	NCAM1 (ENSOARG00020019782)	ENSOARG00020019701
Goat	MODERN SPECIES	6	TAGLN (ENSCHIG00000014769) #33	SIDT2 (ENSCHIG00000014004) #32	PAFAH1B2 (ENSCHIG00000014368) #31	SIK3 (ENSCHIG00000019818) #30	ENSCHIG00000021348 #29	ENSCHIG00000012044	ENSCHIG00000026573 #29	APOC3 (ENSCHIG00000014534) #28	APOA4 (ENSCHIG00000012715) #27	APOA5 (ENSCHIG00000008250) #26	ZPR1 (ENSCHIG00000014226) #25	BUD13 (ENSCHIG00000011480) #24	ENSCHIG00000023860	CADM1 (ENSCHIG00000025944) #23	NXPE2 (ENSCHIG00000014116) #22	NXPE4 (ENSCHIG00000023202) #21	REXO2 (ENSCHIG00000009264) #19	ENSCHIG00000008632 #18	C11orf71 (ENSCHIG00000012470) #17	ENSCHIG00000019784	ENSCHIG00000008702 ##16	ZBTB16 (ENSCHIG00000008305) #15	HTR3A (ENSCHIG00000025459) #14	HTR3B (ENSCHIG00000011976) #13	USP28 (ENSCHIG00000016960) #12	ZW10 (ENSCHIG00000025959) #11	TMPRSS5 (ENSCHIG00000017835) #10	DRD2 (ENSCHIG00000004216) #8	ANKK1 (ENSCHIG00000024082) #7	TTC12 (ENSCHIG00000006414)	NCAM1 (ENSCHIG00000013038)
Siberian musk deer	MODERN SPECIES	1171														CADM1 (ENSMMSG00000021066) #23	NXPE2 (ENSMMSG00000021354) #22	NXPE4 (ENSMMSG00000021386) #21	REXO2 (ENSMMSG00000021410) #19	RBM7 (ENSMMSG00000021482) #18	C11orf71 (ENSMMSG00000021496) #17	ENSMMSG00000021510 #16	ZBTB16 (ENSMMSG00000021523) #15	HTR3A (ENSMMSG00000021560) #14	HTR3B (ENSMMSG00000021606) #13	USP28 (ENSMMSG00000021700) #12	CLDN25 (ENSMMSG00000022091)	ZW10 (ENSMMSG00000022114) #11	ENSMMSG00000022181 #10	DRD2 (ENSMMSG00000022227) #8	TTC12 (ENSMMSG00000022307)	NCAM1 (ENSMMSG00000022395)	ENSMMSG00000023353
Camelidae	ANCESTRAL SPECIES	31	ENSGT00940000155354	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000174149
Arabian camel	MODERN SPECIES	26	DSCAML1 (ENSCDRG00005018684)	CEP164 (ENSCDRG00005018590)	BACE1 (ENSCDRG00005018468) #36	RNF214 (ENSCDRG00005018392) #35	PCSK7 (ENSCDRG00005018259) #34	TAGLN (ENSCDRG00005018224) #33	SIDT2 (ENSCDRG00005018155) #32	PAFAH1B2 (ENSCDRG00005018084) #31	SIK3 (ENSCDRG00005017857) #30	APOA1 (ENSCDRG00005017799) #29	APOA4 (ENSCDRG00005017771) #27	APOA5 (ENSCDRG00005017749) #26	BUD13 (ENSCDRG00005017430) #24	CADM1 (ENSCDRG00005015534) #23	NXPE2 (ENSCDRG00005015404) #22	NXPE4 (ENSCDRG00005015340) #21	REXO2 (ENSCDRG00005015219) #19	RBM7 (ENSCDRG00005015155) #18	C11orf71 (ENSCDRG00005015140) #17	ENSCDRG00005015092	ENSCDRG00005015068 ##16	ZBTB16 (ENSCDRG00005014980) #15	ENSCDRG00005014949	ENSCDRG00005014927 #14	HTR3B (ENSCDRG00005014854) #13	USP28 (ENSCDRG00005014122) #12	CLDN25 (ENSCDRG00005014060)	ENSCDRG00005014029	ZW10 (ENSCDRG00005012776) #11	TMPRSS5 (ENSCDRG00005012392) #10	DRD2 (ENSCDRG00005012244) #8
Alpaca	MODERN SPECIES	654															NXPE2 (ENSVPAG00000007297) #22	NXPE4 (ENSVPAG00000007296) #21
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00950000186376
Ursidae	ANCESTRAL SPECIES	15	ENSGT00980000202537	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.a #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255.db #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00950000186376
Ursus	ANCESTRAL SPECIES	17	ENSGT00980000202537	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.a #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255.db #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00950000186376
American black bear	MODERN SPECIES	6704																NXPE4 (ENSUAMG00000015335) #21
Polar bear	MODERN SPECIES	166	BACE1 (ENSUMAG00000002549) #36	RNF214 (ENSUMAG00000002557) #35	PCSK7 (ENSUMAG00000002564) #34	TAGLN (ENSUMAG00000002571) #33	SIDT2 (ENSUMAG00000002637) #32	PAFAH1B2 (ENSUMAG00000003136) #31	SIK3 (ENSUMAG00000003189) #30	APOA1 (ENSUMAG00000003652) #29	APOC3 (ENSUMAG00000003668) #28	ENSUMAG00000003674	ZPR1 (ENSUMAG00000003680) #25	BUD13 (ENSUMAG00000003691) #24	ENSUMAG00000003725	CADM1 (ENSUMAG00000003739) #23	ENSUMAG00000003761	NXPE4 (ENSUMAG00000003762) #21	REXO2 (ENSUMAG00000003770) #19	RBM7 (ENSUMAG00000003774) #18	C11orf71 (ENSUMAG00000003775) #17	NNMT (ENSUMAG00000003777) #16	ZBTB16 (ENSUMAG00000003782) #15	ENSUMAG00000003784 #14	HTR3B (ENSUMAG00000003795) #13	USP28 (ENSUMAG00000003821) #12	CLDN25 (ENSUMAG00000003831)	ZW10 (ENSUMAG00000003834) #11	TMPRSS5 (ENSUMAG00000003853) #10	DRD2 (ENSUMAG00000003885) #8	TTC12 (ENSUMAG00000003948)	NCAM1 (ENSUMAG00000004545)	ENSUMAG00000006842
Giant Panda	MODERN SPECIES	18	BACE1 (ENSAMEG00000008462) #36	ENSAMEG00000030145	RNF214 (ENSAMEG00000008492) #35	PCSK7 (ENSAMEG00000008508) #34	TAGLN (ENSAMEG00000008543) #33	SIDT2 (ENSAMEG00000008552) #32	PAFAH1B2 (ENSAMEG00000008628) #31	SIK3 (ENSAMEG00000008635) #30	APOA1 (ENSAMEG00000008662) #29	APOC3 (ENSAMEG00000024637) #28	APOA4 (ENSAMEG00000008673) #27	APOA5 (ENSAMEG00000027389) #26	ZPR1 (ENSAMEG00000008688) #25	ENSAMEG00000008712 #24	CADM1 (ENSAMEG00000008621) #23	NXPE4 (ENSAMEG00000013244) #21	REXO2 (ENSAMEG00000013263) #19	RBM7 (ENSAMEG00000013276) #18	C11orf71 (ENSAMEG00000019702) #17	NNMT (ENSAMEG00000013281) #16	ENSAMEG00000013292 #15	HTR3A (ENSAMEG00000013316) #14	HTR3B (ENSAMEG00000005986) #13	USP28 (ENSAMEG00000006005) #12	CLDN25 (ENSAMEG00000019404)	ZW10 (ENSAMEG00000006049) #11	DRD2 (ENSAMEG00000006143) #8	ANKK1 (ENSAMEG00000006163) #7	TTC12 (ENSAMEG00000016494)	NCAM1 (ENSAMEG00000016517)	ENSAMEG00000003962
Canidae	ANCESTRAL SPECIES	27	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Canis_lupus	ANCESTRAL SPECIES	28	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Dog	MODERN SPECIES	33	CEP164 (ENSCAFG00845003568)	BACE1 (ENSCAFG00845003800) #36	RNF214 (ENSCAFG00845003923) #35	PCSK7 (ENSCAFG00845004009) #34	SIDT2 (ENSCAFG00845004135) #32	PAFAH1B2 (ENSCAFG00845004183) #31	SIK3 (ENSCAFG00845004222) #30	APOA1 (ENSCAFG00845004266) #29	APOC3 (ENSCAFG00845004284) #28	APOA4 (ENSCAFG00845004295) #27	APOA5 (ENSCAFG00845004306) #26	ZPR1 (ENSCAFG00845004318) #25	BUD13 (ENSCAFG00845004333) #24	ENSCAFG00845004369	CADM1 (ENSCAFG00845004496) #23	NXPE4 (ENSCAFG00845004542) #21	REXO2 (ENSCAFG00845004561) #19	RBM7 (ENSCAFG00845004624) #18	C11orf71 (ENSCAFG00845004631) #17	NNMT (ENSCAFG00845004639) #16	ENSCAFG00845000214 ##16	ZBTB16 (ENSCAFG00845000220) #15	HTR3A (ENSCAFG00845000246) #14	HTR3B (ENSCAFG00845000289) #13	USP28 (ENSCAFG00845000391) #12	CLDN25 (ENSCAFG00845000483)	ZW10 (ENSCAFG00845000507) #11	TMPRSS5 (ENSCAFG00845000619) #10	DRD2 (ENSCAFG00845000700) #8	ANKK1 (ENSCAFG00845000729) #7	TTC12 (ENSCAFG00845000767)
Dingo	MODERN SPECIES	214	CEP164 (ENSCAFG00020001833)	BACE1 (ENSCAFG00020001856) #36	RNF214 (ENSCAFG00020001863) #35	PCSK7 (ENSCAFG00020001876) #34	TAGLN (ENSCAFG00020001887) #33	SIDT2 (ENSCAFG00020001891) #32	PAFAH1B2 (ENSCAFG00020001903) #31	SIK3 (ENSCAFG00020001944) #30	APOA1 (ENSCAFG00020002273) #29	APOC3 (ENSCAFG00020002278) #28	APOA4 (ENSCAFG00020002295) #27	APOA5 (ENSCAFG00020002299) #26	ZPR1 (ENSCAFG00020002310) #25	BUD13 (ENSCAFG00020002396) #24	CADM1 (ENSCAFG00020002421) #23	NXPE4 (ENSCAFG00020002498) #21	REXO2 (ENSCAFG00020002513) #19	RBM7 (ENSCAFG00020002518) #18	C11orf71 (ENSCAFG00020002560) #17	NNMT (ENSCAFG00020002563) #16	ENSCAFG00020002568 ##16	ZBTB16 (ENSCAFG00020002582) #15	HTR3A (ENSCAFG00020002588) #14	HTR3B (ENSCAFG00020002619) #13	USP28 (ENSCAFG00020002820) #12	CLDN25 (ENSCAFG00020004160)	ZW10 (ENSCAFG00020004218) #11	TMPRSS5 (ENSCAFG00020005248) #10	DRD2 (ENSCAFG00020005329) #8	ANKK1 (ENSCAFG00020005346) #7	TTC12 (ENSCAFG00020005382)
Red fox	MODERN SPECIES	29	RNF214 (ENSVVUG00000024712) #35	PCSK7 (ENSVVUG00000024724) #34	TAGLN (ENSVVUG00000024731) #33	SIDT2 (ENSVVUG00000024787) #32	PAFAH1B2 (ENSVVUG00000025142) #31	SIK3 (ENSVVUG00000025160) #30	APOA1 (ENSVVUG00000025187) #29	APOC3 (ENSVVUG00000025189) #28	APOA4 (ENSVVUG00000025192) #27	APOA5 (ENSVVUG00000025194) #26	ZPR1 (ENSVVUG00000025195) #25	BUD13 (ENSVVUG00000025196) #24	ENSVVUG00000025197	ENSVVUG00000025198	CADM1 (ENSVVUG00000025207) #23	NXPE4 (ENSVVUG00000025218) #21	REXO2 (ENSVVUG00000025223) #19	RBM7 (ENSVVUG00000025225) #18	CUNH11orf71 (ENSVVUG00000025227) #17
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Chiroptera	ANCESTRAL SPECIES	33	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00900000143181
Megabat	MODERN SPECIES	3514																NXPE4 (ENSPVAG00000005297) #21	ENSPVAG00000005296 #20	REXO2 (ENSPVAG00000005295) #19	RBM7 (ENSPVAG00000005294) #18	NNMT (ENSPVAG00000005292) #16	ZBTB16 (ENSPVAG00000005291) #15	HTR3A (ENSPVAG00000005290) #14	HTR3B (ENSPVAG00000005289) #13	USP28 (ENSPVAG00000005288) #12	ZW10 (ENSPVAG00000005286) #11
Equus	ANCESTRAL SPECIES	25	ENSGT00950000183199.a.a #31	ENSGT00940000157259.d #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000155458.tc	ENSGT00940000156093 #23	ENSGT00950000182960.a.a.a.a.b.qb.b	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00390000011708.a.k.a.a ##16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Horse	MODERN SPECIES	28	SIDT2 (ENSECAG00000021466) #32	PAFAH1B2 (ENSECAG00000034204) #31	ENSECAG00000058875	SIK3 (ENSECAG00000010252) #30	APOA1 (ENSECAG00000009752) #29	APOC3 (ENSECAG00000039785) #28	APOA4 (ENSECAG00000004903) #27	APOA5 (ENSECAG00000000418) #26	ZPR1 (ENSECAG00000010981) #25	ENSECAG00000032980	BUD13 (ENSECAG00000008863) #24	ENSECAG00000028225	CADM1 (ENSECAG00000015144) #23	ENSECAG00000050395	ENSECAG00000053989 #22	NXPE4 (ENSECAG00000012359) #21	NXPE1 (ENSECAG00000013719) #20	REXO2 (ENSECAG00000005988) #19	RBM7 (ENSECAG00000004636) #18	C7H11orf71 (ENSECAG00000005737) #17	NNMT (ENSECAG00000042589) #16	ENSECAG00000004515 ##16	ZBTB16 (ENSECAG00000024358) #15	HTR3A (ENSECAG00000020191) #14	USP28 (ENSECAG00000023344) #12	CLDN25 (ENSECAG00000005722)	ZW10 (ENSECAG00000011623) #11	TMPRSS5 (ENSECAG00000023128) #10	DRD2 (ENSECAG00000013567) #8	ANKK1 (ENSECAG00000011781) #7	TTC12 (ENSECAG00000017966)
Donkey	MODERN SPECIES	12	PAFAH1B2 (ENSEASG00005029720) #31	SIK3 (ENSEASG00005006529) #30	APOA1 (ENSEASG00005038098) #29	ENSEASG00005006566	APOC3 (ENSEASG00005036051) #28	APOA4 (ENSEASG00005006571) #27	ENSEASG00005006573	APOA5 (ENSEASG00005024582) #26	ZPR1 (ENSEASG00005006581) #25	BUD13 (ENSEASG00005006650) #24	ENSEASG00005031751	ENSEASG00005006652	CADM1 (ENSEASG00005006655) #23	ENSEASG00005006660	ENSEASG00005006664 #22	NXPE4 (ENSEASG00005006666) #21	NXPE1 (ENSEASG00005006668) #20	REXO2 (ENSEASG00005006674) #19	RBM7 (ENSEASG00005031719) #18	C11orf71 (ENSEASG00005006678) #17	ZBTB16 (ENSEASG00005006684) #15	ENSEASG00005028806 ##16	HTR3A (ENSEASG00005006687) #14	USP28 (ENSEASG00005006691) #12	CLDN25 (ENSEASG00005006703)	ZW10 (ENSEASG00005006707) #11	TMPRSS5 (ENSEASG00005006720) #10	DRD2 (ENSEASG00005006735) #8	ANKK1 (ENSEASG00005006737) #7	TTC12 (ENSEASG00005006742)	NCAM1 (ENSEASG00005006756)
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Glires	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Muroidea	ANCESTRAL SPECIES	29	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Chinese hamster chok1gshd	MODERN SPECIES	284	Rnf214 (ENSCGRG00001022173) #35	Pcsk7 (ENSCGRG00001003140) #34	Tagln (ENSCGRG00001023407) #33	Sidt2 (ENSCGRG00001019094) #32	ENSCGRG00001018542 #31	Sik3 (ENSCGRG00001003605) #30	Apoa1 (ENSCGRG00001024204) #29	Apoc3 (ENSCGRG00001005242) #28	Apoa4 (ENSCGRG00001024960) #27	Apoa5 (ENSCGRG00001024502) #26	Zpr1 (ENSCGRG00001013967) #25	Bud13 (ENSCGRG00001019626) #24	ENSCGRG00001004852	Cadm1 (ENSCGRG00001023561) #23	ENSCGRG00001013462 #22	Nxpe4 (ENSCGRG00001011592) #21	ENSCGRG00001022529 #20	ENSCGRG00001019814 #19	Rbm7 (ENSCGRG00001019236) #18	Gm5617 (ENSCGRG00001001466) #17	Nnmt (ENSCGRG00001013317) #16	Zbtb16 (ENSCGRG00001024806) #15	Htr3a (ENSCGRG00001002154) #14	Htr3b (ENSCGRG00001023267) #13	Usp28 (ENSCGRG00001023338) #12	ENSCGRG00001000915	Zw10 (ENSCGRG00001023701) #11	Tmprss5 (ENSCGRG00001023126) #10	ENSCGRG00001012459	Drd2 (ENSCGRG00001020389) #8	Ankk1 (ENSCGRG00001015626) #7
Golden Hamster	MODERN SPECIES	635	ENSMAUG00000002432 #35	Pcsk7 (ENSMAUG00000016951) #34	Tagln (ENSMAUG00000020924) #33	Sidt2 (ENSMAUG00000014540) #32	Pafah1b2 (ENSMAUG00000020507) #31	Sik3 (ENSMAUG00000013720) #30	Apoa1 (ENSMAUG00000018114) #29	ENSMAUG00000020016	Apoa4 (ENSMAUG00000018590) #27	Apoa5 (ENSMAUG00000021305) #26	Zpr1 (ENSMAUG00000014185) #25	Bud13 (ENSMAUG00000008604) #24	ENSMAUG00000021484	Cadm1 (ENSMAUG00000003636) #23	ENSMAUG00000010705 #22	Nxpe4 (ENSMAUG00000020773) #21	Rexo2 (ENSMAUG00000014576) #19	ENSMAUG00000017938 #18	Nnmt (ENSMAUG00000018665) #16	Zbtb16 (ENSMAUG00000010982) #15	Htr3a (ENSMAUG00000010378) #14	Htr3b (ENSMAUG00000010708) #13	Usp28 (ENSMAUG00000008295) #12	Zw10 (ENSMAUG00000010543) #11	Tmprss5 (ENSMAUG00000022000) #10	Drd2 (ENSMAUG00000011091) #8	Ttc12 (ENSMAUG00000013995)	Ncam1 (ENSMAUG00000021119)	ENSMAUG00000014097	Plet1 (ENSMAUG00000011494)	Pts (ENSMAUG00000018576)
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Prairie vole	MODERN SPECIES	13	Pcsk7 (ENSMOCG00000013874) #34	ENSMOCG00000014927 #33	Sidt2 (ENSMOCG00000004336) #32	Pafah1b2 (ENSMOCG00000011370) #31	Sik3 (ENSMOCG00000014581) #30	Apoa1 (ENSMOCG00000017674) #29	ENSMOCG00000008019	Apoa4 (ENSMOCG00000008908) #27	Apoa5 (ENSMOCG00000012382) #26	Zpr1 (ENSMOCG00000015722) #25	Bud13 (ENSMOCG00000020780) #24	4931429L15Rik (ENSMOCG00000016196)	Cadm1 (ENSMOCG00000012493) #23	ENSMOCG00000015214 #22	ENSMOCG00000009738 #22	Nxpe4 (ENSMOCG00000020704) #21	Rexo2 (ENSMOCG00000009016) #19	Rbm7 (ENSMOCG00000009674) #18	Nnmt (ENSMOCG00000020571) #16	Zbtb16 (ENSMOCG00000001402) #15	ENSMOCG00000007442	Htr3a (ENSMOCG00000017513) #14	Htr3b (ENSMOCG00000007763) #13	Usp28 (ENSMOCG00000017498) #12	Zw10 (ENSMOCG00000009519) #11	Tmprss5 (ENSMOCG00000019745) #10	DRD2 (ENSMOCG00000013394) #8	Ttc12 (ENSMOCG00000018797)	Ncam1 (ENSMOCG00000020055)	ENSMOCG00000002086	Pts (ENSMOCG00000014219)
Northern American deer mouse	MODERN SPECIES	20	Tagln (ENSPEMG00000022640) #33	Sidt2 (ENSPEMG00000021149) #32	Pafah1b2 (ENSPEMG00000027983) #31	Sik3 (ENSPEMG00000006295) #30	Apoa1 (ENSPEMG00000011979) #29	Apoc3 (ENSPEMG00000011253) #28	Apoa4 (ENSPEMG00000015480) #27	ENSPEMG00000025005	Apoa5 (ENSPEMG00000008037) #26	ENSPEMG00000010769 #25	Bud13 (ENSPEMG00000016113) #24	4931429L15Rik (ENSPEMG00000013164)	ENSPEMG00000014812	Cadm1 (ENSPEMG00000001825) #23	Nxpe2 (ENSPEMG00000013012) #22	Nxpe4 (ENSPEMG00000008500) #21	ENSPEMG00000028974 #20	Rexo2 (ENSPEMG00000001421) #19	ENSPEMG00000027574 #18	Gm5617 (ENSPEMG00000027308) #17	Nnmt (ENSPEMG00000010869) #16	Zbtb16 (ENSPEMG00000008489) #15	Htr3a (ENSPEMG00000011767) #14	Htr3b (ENSPEMG00000011245) #13	Usp28 (ENSPEMG00000007642) #12	ENSPEMG00000025300	Zw10 (ENSPEMG00000020641) #11	Tmprss5 (ENSPEMG00000020635) #10	Drd2 (ENSPEMG00000012651) #8	Ankk1 (ENSPEMG00000011950) #7	Ttc12 (ENSPEMG00000011009)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Mus	ANCESTRAL SPECIES	4	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00860000135752	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00860000135752	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000185356	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00860000135752	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Steppe mouse	MODERN SPECIES	3372	Sik3 (ENSMSIG00000011054) #30	Apoa1 (ENSMSIG00000011153) #29	ENSMSIG00000011165	Apoc3 (ENSMSIG00000011168) #28	Apoa4 (ENSMSIG00000011179) #27	ENSMSIG00000011188	Apoa5 (ENSMSIG00000011204) #26	Zpr1 (ENSMSIG00000011232) #25	Bud13 (ENSMSIG00000011279) #24	4931429L15Rik (ENSMSIG00000011321)	ENSMSIG00000011446	ENSMSIG00000011463	Cadm1 (ENSMSIG00000011500) #23	ENSMSIG00000012512	Nxpe2 (ENSMSIG00000012518) #22	Nxpe4 (ENSMSIG00000012534) #21	ENSMSIG00000012577 #20	Rexo2 (ENSMSIG00000012688) #19	Rbm7 (ENSMSIG00000012760) #18	Nnmt (ENSMSIG00000012794) #16	Zbtb16 (ENSMSIG00000012819) #15	Htr3a (ENSMSIG00000012846) #14	Htr3b (ENSMSIG00000012863) #13	Usp28 (ENSMSIG00000012895) #12	ENSMSIG00000013079	Zw10 (ENSMSIG00000013094) #11	Tmprss5 (ENSMSIG00000013179) #10	ENSMSIG00000013481	Drd2 (ENSMSIG00000013494) #8	Ankk1 (ENSMSIG00000013556) #7	Ttc12 (ENSMSIG00000013591)
spretus	MODERN SPECIES	18	Pcsk7 (MGP_SPRETEiJ_G0033289) #34	Tagln (MGP_SPRETEiJ_G0033290) #33	Sidt2 (MGP_SPRETEiJ_G0033291) #32	Pafah1b2 (MGP_SPRETEiJ_G0033292) #31	Sik3 (MGP_SPRETEiJ_G0033293) #30	Apoa1 (MGP_SPRETEiJ_G0033294) #29	MGP_SPRETEiJ_G0033295 #28	Apoa4 (MGP_SPRETEiJ_G0033296) #27	Apoa5 (MGP_SPRETEiJ_G0033297) #26	Zpr1 (MGP_SPRETEiJ_G0033298) #25	Bud13 (MGP_SPRETEiJ_G0033299) #24	4931429L15Rik (MGP_SPRETEiJ_G0033300)	MGP_SPRETEiJ_G0033301	Cadm1 (MGP_SPRETEiJ_G0033302) #23	Nxpe2 (MGP_SPRETEiJ_G0033303) #22	Nxpe4 (MGP_SPRETEiJ_G0033304) #21	Rexo2 (MGP_SPRETEiJ_G0033305) #19	Rbm7 (MGP_SPRETEiJ_G0033306) #18	Gm5617 (MGP_SPRETEiJ_G0033307) #17	Nnmt (MGP_SPRETEiJ_G0033308) #16	Zbtb16 (MGP_SPRETEiJ_G0033309) #15	Htr3a (MGP_SPRETEiJ_G0033310) #14	Htr3b (MGP_SPRETEiJ_G0033311) #13	Usp28 (MGP_SPRETEiJ_G0033312) #12	Zw10 (MGP_SPRETEiJ_G0033313) #11	Tmprss5 (MGP_SPRETEiJ_G0033314) #10	MGP_SPRETEiJ_G0033315	Drd2 (MGP_SPRETEiJ_G0033316) #8	Ankk1 (MGP_SPRETEiJ_G0033317) #7	Ttc12 (MGP_SPRETEiJ_G0033318)	Ncam1 (MGP_SPRETEiJ_G0033319)
Mouse	MODERN SPECIES	18	Bace1 (ENSMUSG00000032086) #36	Rnf214 (ENSMUSG00000042790) #35	Pcsk7 (ENSMUSG00000035382) #34	Tagln (ENSMUSG00000032085) #33	Sidt2 (ENSMUSG00000034908) #32	Pafah1b2 (ENSMUSG00000003131) #31	Sik3 (ENSMUSG00000034135) #30	Apoa1 (ENSMUSG00000032083) #29	Apoc3 (ENSMUSG00000032081) #28	Apoa4 (ENSMUSG00000032080) #27	Apoa5 (ENSMUSG00000032079) #26	Zpr1 (ENSMUSG00000032078) #25	Bud13 (ENSMUSG00000032077) #24	4931429L15Rik (ENSMUSG00000056617)	Cadm1 (ENSMUSG00000032076) #23	Nxpe4 (ENSMUSG00000044229) #21	Nxpe2 (ENSMUSG00000032028) #22	Rexo2 (ENSMUSG00000032026) #19	Rbm7 (ENSMUSG00000042396) #18	Gm5617 (ENSMUSG00000042293) #17	Nnmt (ENSMUSG00000032271) #16	Zbtb16 (ENSMUSG00000066687) #15	Htr3a (ENSMUSG00000032269) #14	Htr3b (ENSMUSG00000008590) #13	Usp28 (ENSMUSG00000032267) #12	Zw10 (ENSMUSG00000032264) #11	Tmprss5 (ENSMUSG00000032268) #10	Drd2 (ENSMUSG00000032259) #8	Ankk1 (ENSMUSG00000032257) #7	Ttc12 (ENSMUSG00000040219)	Ncam1 (ENSMUSG00000039542)
Ryukyu mouse	MODERN SPECIES	18	Rnf214 (MGP_CAROLIEiJ_G0032149) #35	Pcsk7 (MGP_CAROLIEiJ_G0032150) #34	Tagln (MGP_CAROLIEiJ_G0032151) #33	Sidt2 (MGP_CAROLIEiJ_G0032152) #32	Pafah1b2 (MGP_CAROLIEiJ_G0032153) #31	Sik3 (MGP_CAROLIEiJ_G0032154) #30	Apoa1 (MGP_CAROLIEiJ_G0032155) #29	Apoc3 (MGP_CAROLIEiJ_G0032156) #28	Apoa4 (MGP_CAROLIEiJ_G0032157) #27	Apoa5 (MGP_CAROLIEiJ_G0032158) #26	Zpr1 (MGP_CAROLIEiJ_G0032159) #25	Bud13 (MGP_CAROLIEiJ_G0032160) #24	4931429L15Rik (MGP_CAROLIEiJ_G0032161)	Cadm1 (MGP_CAROLIEiJ_G0032162) #23	Nxpe2 (MGP_CAROLIEiJ_G0032163) #22	Nxpe4 (MGP_CAROLIEiJ_G0032164) #21	MGP_CAROLIEiJ_G0032165 #20	Rexo2 (MGP_CAROLIEiJ_G0032166) #19	Rbm7 (MGP_CAROLIEiJ_G0032167) #18	Gm5617 (MGP_CAROLIEiJ_G0032168) #17	Nnmt (MGP_CAROLIEiJ_G0032169) #16	Zbtb16 (MGP_CAROLIEiJ_G0032170) #15	Htr3a (MGP_CAROLIEiJ_G0032171) #14	Htr3b (MGP_CAROLIEiJ_G0032172) #13	Usp28 (MGP_CAROLIEiJ_G0032173) #12	Zw10 (MGP_CAROLIEiJ_G0032174) #11	Tmprss5 (MGP_CAROLIEiJ_G0032175) #10	MGP_CAROLIEiJ_G0032176	Drd2 (MGP_CAROLIEiJ_G0032177) #8	Ankk1 (MGP_CAROLIEiJ_G0032178) #7	Ttc12 (MGP_CAROLIEiJ_G0032179)
Rat	MODERN SPECIES	18	Pafah1b2 (ENSRNOG00000057102) #31	ENSRNOG00000067804	Sik3 (ENSRNOG00000045931) #30	ENSRNOG00000064478	Apoa1 (ENSRNOG00000045679) #29	Apoc3 (ENSRNOG00000047503) #28	Apoa4 (ENSRNOG00000055909) #27	AABR07073400.1 (ENSRNOG00000059084)	Apoa5 (ENSRNOG00000018436) #26	Zpr1 (ENSRNOG00000018481) #25	Bud13 (ENSRNOG00000018665) #24	LOC500990 (ENSRNOG00000038867)	AC135409.1 (ENSRNOG00000038864)	Cadm1 (ENSRNOG00000018778) #23	Nxpe2 (ENSRNOG00000027847) #22	Nxpe4 (ENSRNOG00000070472) #21	Nxpe1 (ENSRNOG00000027730) #20	Rexo2 (ENSRNOG00000018939) #19	Rbm7 (ENSRNOG00000005710) #18	C8h11orf71 (ENSRNOG00000005918) #17	Nnmt (ENSRNOG00000005930) #16	Zbtb16 (ENSRNOG00000029980) #15	Htr3a (ENSRNOG00000006595) #14	Htr3b (ENSRNOG00000006920) #13	Usp28 (ENSRNOG00000007325) #12	Cldn25 (ENSRNOG00000057454)	Zw10 (ENSRNOG00000054479) #11	Tmprss5 (ENSRNOG00000008058) #10	Drd2 (ENSRNOG00000008428) #8	Ankk1 (ENSRNOG00000025037) #7	Ttc12 (ENSRNOG00000008595)
Upper Galilee mountains blind mole rat	MODERN SPECIES	762																Nxpe4 (ENSNGAG00000012576) #21
Lesser Egyptian jerboa	MODERN SPECIES	132	Rnf214 (ENSJJAG00000004332) #35	Pcsk7 (ENSJJAG00000020663) #34	Tagln (ENSJJAG00000008327) #33	Sidt2 (ENSJJAG00000016500) #32	ENSJJAG00000018625 #31	Sik3 (ENSJJAG00000019134) #30	Apoa1 (ENSJJAG00000013728) #29	Apoc3 (ENSJJAG00000013535) #28	Apoa4 (ENSJJAG00000016525) #27	Apoa5 (ENSJJAG00000017262) #26	Zpr1 (ENSJJAG00000019581) #25	Bud13 (ENSJJAG00000010737) #24	ENSJJAG00000011793	Cadm1 (ENSJJAG00000018197) #23	ENSJJAG00000003168	Nxpe4 (ENSJJAG00000010843) #21	ENSJJAG00000013710 #19	ENSJJAG00000016540 #18	Nnmt (ENSJJAG00000017355) #16	Zbtb16 (ENSJJAG00000019821) #15	Htr3a (ENSJJAG00000021347) #14	Htr3b (ENSJJAG00000008134) #13	Usp28 (ENSJJAG00000018326) #12	Zw10 (ENSJJAG00000014864) #11	Tmprss5 (ENSJJAG00000019055) #10	ENSJJAG00000011151	Drd2 (ENSJJAG00000011634) #8	ENSJJAG00000016572	Ncam1 (ENSJJAG00000020370)	ENSJJAG00000013932	ENSJJAG00000015396
Kangaroo rat	MODERN SPECIES	329	Bace1 (ENSDORG00000013760) #36	Rnf214 (ENSDORG00000013754) #35	Pcsk7 (ENSDORG00000011279) #34	Tagln (ENSDORG00000011278) #33	Sidt2 (ENSDORG00000011276) #32	Pafah1b2 (ENSDORG00000026379) #31	Sik3 (ENSDORG00000015104) #30	Apoa1 (ENSDORG00000012400) #29	ENSDORG00000012402 #28	Apoa4 (ENSDORG00000028525) #27	Apoa5 (ENSDORG00000012403) #26	Zpr1 (ENSDORG00000012404) #25	Bud13 (ENSDORG00000012405) #24	Cadm1 (ENSDORG00000007798) #23	Nxpe2 (ENSDORG00000011862) #22	Nxpe4 (ENSDORG00000002930) #21	Rexo2 (ENSDORG00000011255) #19	Rbm7 (ENSDORG00000029149) #18	Nnmt (ENSDORG00000001312) #16	Zbtb16 (ENSDORG00000011901) #15	Htr3a (ENSDORG00000014030) #14	Htr3b (ENSDORG00000014039) #13	Usp28 (ENSDORG00000011419) #12	Zw10 (ENSDORG00000011414) #11	Tmprss5 (ENSDORG00000011412) #10	Drd2 (ENSDORG00000013516) #8	Ankk1 (ENSDORG00000013515) #7	Ttc12 (ENSDORG00000013510)	Ncam1 (ENSDORG00000015038)	Pts (ENSDORG00000013720)	Bco2 (ENSDORG00000006692)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Naked mole-rat female	MODERN SPECIES	24	TAGLN (ENSHGLG00000036843) #33	SIDT2 (ENSHGLG00000013525) #32	PAFAH1B2 (ENSHGLG00000038396) #31	ENSHGLG00000036675	SIK3 (ENSHGLG00000018892) #30	ENSHGLG00000019472	Apoa1 (ENSHGLG00000043209) #29	APOC3 (ENSHGLG00000043547) #28	APOA4 (ENSHGLG00000049508) #27	APOA5 (ENSHGLG00000015377) #26	ZPR1 (ENSHGLG00000014088) #25	BUD13 (ENSHGLG00000013562) #24	ENSHGLG00000001469	CADM1 (ENSHGLG00000015066) #23	NXPE2 (ENSHGLG00000046949) #22	NXPE4 (ENSHGLG00000013847) #21	NXPE1 (ENSHGLG00000044726) #20	ENSHGLG00000007101	ENSHGLG00000017602	REXO2 (ENSHGLG00000039307) #19	ENSHGLG00000043710 #18	ENSHGLG00000033388	ENSHGLG00000015185 #16	ZBTB16 (ENSHGLG00000007562) #15	HTR3A (ENSHGLG00000006163) #14	HTR3B (ENSHGLG00000045380) #13	USP28 (ENSHGLG00000003749) #12	CLDN25 (ENSHGLG00000014340)	ZW10 (ENSHGLG00000013323) #11	TMPRSS5 (ENSHGLG00000018841) #10	ENSHGLG00000007066
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Guinea pig	MODERN SPECIES	19	BACE1 (ENSCPOG00000012754) #36	RNF214 (ENSCPOG00000006642) #35	PCSK7 (ENSCPOG00000008710) #34	TAGLN (ENSCPOG00000035678) #33	SIDT2 (ENSCPOG00000007005) #32	ENSCPOG00000039233 #31	SIK3 (ENSCPOG00000014448) #30	APOA1 (ENSCPOG00000020511) #29	ENSCPOG00000025900 #28	APOA4 (ENSCPOG00000021763) #27	APOA5 (ENSCPOG00000014444) #26	ZPR1 (ENSCPOG00000014442) #25	BUD13 (ENSCPOG00000014440) #24	CADM1 (ENSCPOG00000005736) #23	NXPE2 (ENSCPOG00000011786) #22	NXPE4 (ENSCPOG00000000299) #21	REXO2 (ENSCPOG00000010548) #19	RBM7 (ENSCPOG00000034273) #18	NNMT (ENSCPOG00000013034) #16	ZBTB16 (ENSCPOG00000004151) #15	HTR3A (ENSCPOG00000010833) #14	HTR3B (ENSCPOG00000010829) #13	USP28 (ENSCPOG00000001875) #12	ZW10 (ENSCPOG00000005097) #11	ENSCPOG00000009863 #10	DRD2 (ENSCPOG00000009265) #8	ANKK1 (ENSCPOG00000001170) #7	TTC12 (ENSCPOG00000004685)	NCAM1 (ENSCPOG00000004681)	PTS (ENSCPOG00000034020)	BCO2 (ENSCPOG00000009905)
Hystricomorpha_b	ANCESTRAL SPECIES	23	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743	ENSGT00390000014690
Long-tailed chinchilla	MODERN SPECIES	119	BACE1 (ENSCLAG00000013254) #36	RNF214 (ENSCLAG00000013474) #35	PCSK7 (ENSCLAG00000016220) #34	TAGLN (ENSCLAG00000014865) #33	SIDT2 (ENSCLAG00000016253) #32	PAFAH1B2 (ENSCLAG00000014390) #31	SIK3 (ENSCLAG00000014337) #30	APOA1 (ENSCLAG00000011551) #29	APOC3 (ENSCLAG00000012828) #28	APOA4 (ENSCLAG00000015342) #27	APOA5 (ENSCLAG00000013015) #26	ZPR1 (ENSCLAG00000014804) #25	BUD13 (ENSCLAG00000014184) #24	CADM1 (ENSCLAG00000013357) #23	NXPE2 (ENSCLAG00000011921) #22	NXPE4 (ENSCLAG00000011609) #21	REXO2 (ENSCLAG00000011195) #19	ENSCLAG00000017767	RBM7 (ENSCLAG00000014875) #18	C11orf71 (ENSCLAG00000014517) #17	NNMT (ENSCLAG00000014574) #16	ZBTB16 (ENSCLAG00000014819) #15	HTR3A (ENSCLAG00000016559) #14	HTR3B (ENSCLAG00000016164) #13	USP28 (ENSCLAG00000013072) #12	ZW10 (ENSCLAG00000011976) #11	TMPRSS5 (ENSCLAG00000016268) #10	DRD2 (ENSCLAG00000016034) #8	ANKK1 (ENSCLAG00000011795) #7	TTC12 (ENSCLAG00000011783)	NCAM1 (ENSCLAG00000013591)
Degu	MODERN SPECIES	121	TAGLN (ENSODEG00000010754) #33	SIDT2 (ENSODEG00000008713) #32	ENSODEG00000009634 #31	SIK3 (ENSODEG00000008742) #30	APOA1 (ENSODEG00000009009) #29	APOC3 (ENSODEG00000009621) #28	APOA4 (ENSODEG00000009495) #27	APOA5 (ENSODEG00000009824) #26	ENSODEG00000009762 #25	BUD13 (ENSODEG00000009553) #24	ENSODEG00000019764	CADM1 (ENSODEG00000009219) #23	ENSODEG00000019777	ENSODEG00000008886	NXPE2 (ENSODEG00000009114) #22	NXPE4 (ENSODEG00000009082) #21	ENSODEG00000009750 #19	ENSODEG00000010164 #18	NNMT (ENSODEG00000009612) #16	ZBTB16 (ENSODEG00000012587) #15	HTR3A (ENSODEG00000012218) #14	HTR3B (ENSODEG00000011923) #13	USP28 (ENSODEG00000010686) #12	ENSODEG00000009062
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	185																ENSGT00950000182866.D.c.h.a #21	ENSGT00950000182866.D.c.g.c.d #20
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	25	SIDT2 (ENSMMMG00000022918) #32	PAFAH1B2 (ENSMMMG00000022949) #31	SIK3 (ENSMMMG00000022956) #30	APOA1 (ENSMMMG00000022965) #29	APOC3 (ENSMMMG00000022968) #28	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12	CLDN25 (ENSMMMG00000023330)
Alpin marmot	MODERN SPECIES	25	SIK3 (ENSMMMG00000022956) #30	APOA1 (ENSMMMG00000022965) #29	APOC3 (ENSMMMG00000022968) #28	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14	HTR3B (ENSMMMG00000023307) #13	USP28 (ENSMMMG00000023313) #12	CLDN25 (ENSMMMG00000023330)	ZW10 (ENSMMMG00000023333) #11	TMPRSS5 (ENSMMMG00000023341) #10
Marmotini_b	ANCESTRAL SPECIES	113																ENSGT00950000182866.D.c.h.a #21	ENSGT00950000182866.D.c.g.c.d #20	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8
Arctic ground squirrel	MODERN SPECIES	104																ENSUPAG00010021294 #21	ENSUPAG00010021275 #20	ENSUPAG00010021266 #20	ENSUPAG00010021260 #20	ENSUPAG00010021231 #20	REXO2 (ENSUPAG00010021187) #19	RBM7 (ENSUPAG00010021174) #18	C11orf71 (ENSUPAG00010021172) #17	NNMT (ENSUPAG00010021165) #16	ZBTB16 (ENSUPAG00010021150) #15	HTR3A (ENSUPAG00010021143) #14	HTR3B (ENSUPAG00010021131) #13	USP28 (ENSUPAG00010021015) #12	CLDN25 (ENSUPAG00010020995)	ENSUPAG00010020992	ZW10 (ENSUPAG00010020979) #11
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h.b #21	ENSGT00950000182866.D.c.g.c.c.b #20	ENSGT00950000182866.D.c.g.c.c.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.m.a #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758
Alpin marmot	MODERN SPECIES	25	RNF214 (ENSMMMG00000022855) #35	PCSK7 (ENSMMMG00000022903) #34	TAGLN (ENSMMMG00000022913) #33	SIDT2 (ENSMMMG00000022918) #32	PAFAH1B2 (ENSMMMG00000022949) #31	SIK3 (ENSMMMG00000022956) #30	APOA1 (ENSMMMG00000022965) #29	APOC3 (ENSMMMG00000022968) #28	APOA4 (ENSMMMG00000022973) #27	ENSMMMG00000022975	APOA5 (ENSMMMG00000022979) #26	ZPR1 (ENSMMMG00000022984) #25	BUD13 (ENSMMMG00000022995) #24	CADM1 (ENSMMMG00000023027) #23	NXPE2 (ENSMMMG00000023218) #22	ENSMMMG00000023224 #21	ENSMMMG00000023228	ENSMMMG00000023231 #20	ENSMMMG00000023242 #21	ENSMMMG00000023254 #20	ENSMMMG00000023258 #21	ENSMMMG00000023260 #20	ENSMMMG00000023262	ENSMMMG00000023264 #20	ENSMMMG00000023265 #20	REXO2 (ENSMMMG00000023268) #19	ENSMMMG00000023273 #18	C11orf71 (ENSMMMG00000023278) #17	NNMT (ENSMMMG00000023293) #16	ZBTB16 (ENSMMMG00000023298) #15	HTR3A (ENSMMMG00000023299) #14
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.h.b #21
Squirrel	MODERN SPECIES	572																ENSSTOG00000026566 #21
Arctic ground squirrel	MODERN SPECIES	1040																ENSUPAG00010018298 #21
Eurasian red squirrel	MODERN SPECIES	2	BACE1 (ENSSVLG00005022881) #36	RNF214 (ENSSVLG00005022823) #35	PCSK7 (ENSSVLG00005022755) #34	TAGLN (ENSSVLG00005022723) #33	SIDT2 (ENSSVLG00005022651) #32	PAFAH1B2 (ENSSVLG00005022556) #31	SIK3 (ENSSVLG00005022246) #30	APOA1 (ENSSVLG00005022170) #29	APOC3 (ENSSVLG00005022119) #28	APOA4 (ENSSVLG00005022074) #27	APOA5 (ENSSVLG00005022035) #26	ENSSVLG00005021926 #25	BUD13 (ENSSVLG00005021901) #24	CADM1 (ENSSVLG00005021385) #23	NXPE2 (ENSSVLG00005021221) #22	NXPE4 (ENSSVLG00005021122) #21	ENSSVLG00005021093	ENSSVLG00005020876 #20	ENSSVLG00005020642 #20	ENSSVLG00005020557 #20	REXO2 (ENSSVLG00005020422) #19	RBM7 (ENSSVLG00005020354) #18	C11orf71 (ENSSVLG00005020339) #17	ENSSVLG00005020322	NNMT (ENSSVLG00005020280) #16	ZBTB16 (ENSSVLG00005020211) #15	HTR3A (ENSSVLG00005019864) #14	HTR3B (ENSSVLG00005019693) #13	USP28 (ENSSVLG00005019534) #12	CLDN25 (ENSSVLG00005019372)	ZW10 (ENSSVLG00005019311) #11
Lagomorpha	ANCESTRAL SPECIES	702																ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20
Pika	MODERN SPECIES	5168																NXPE4 (ENSOPRG00000012508) #21	ENSOPRG00000012495 #20
Primates	ANCESTRAL SPECIES		ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Simiiformes	ANCESTRAL SPECIES		ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.g.b #18	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Gorilla	MODERN SPECIES	2	BACE1 (ENSGGOG00000014376) #36	RNF214 (ENSGGOG00000014362) #35	PCSK7 (ENSGGOG00000014344) #34	TAGLN (ENSGGOG00000014333) #33	SIDT2 (ENSGGOG00000014318) #32	PAFAH1B2 (ENSGGOG00000037923) #31	SIK3 (ENSGGOG00000011085) #30	APOA1 (ENSGGOG00000008006) #29	APOC3 (ENSGGOG00000008004) #28	APOA4 (ENSGGOG00000028447) #27	APOA5 (ENSGGOG00000000666) #26	ZPR1 (ENSGGOG00000000664) #25	BUD13 (ENSGGOG00000000662) #24	CADM1 (ENSGGOG00000010219) #23	ENSGGOG00000010022 #22	NXPE4 (ENSGGOG00000008842) #21	NXPE1 (ENSGGOG00000024286) #20	REXO2 (ENSGGOG00000023267) #19	ENSGGOG00000009941 #18	ENSGGOG00000038884	ENSGGOG00000009932 #17	NNMT (ENSGGOG00000003749) #16	ZBTB16 (ENSGGOG00000000319) #15	HTR3A (ENSGGOG00000014709) #14	HTR3B (ENSGGOG00000005084) #13	USP28 (ENSGGOG00000005119) #12	ENSGGOG00000027059	ZW10 (ENSGGOG00000015283) #11	TMPRSS5 (ENSGGOG00000026807) #10	DRD2 (ENSGGOG00000003244) #8	ANKK1 (ENSGGOG00000003237) #7
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.g.b #18	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7
Human	MODERN SPECIES	2	BACE1 (ENSG00000186318) #36	RNF214 (ENSG00000167257) #35	PCSK7 (ENSG00000160613) #34	TAGLN (ENSG00000149591) #33	SIDT2 (ENSG00000149577) #32	PAFAH1B2 (ENSG00000168092) #31	SIK3 (ENSG00000160584) #30	APOA1 (ENSG00000118137) #29	APOC3 (ENSG00000110245) #28	APOA4 (ENSG00000110244) #27	APOA5 (ENSG00000110243) #26	ZPR1 (ENSG00000109917) #25	BUD13 (ENSG00000137656) #24	CADM1 (ENSG00000182985) #23	NXPE2 (ENSG00000204361) #22	NXPE4 (ENSG00000137634) #21	NXPE1 (ENSG00000095110) #20	REXO2 (ENSG00000076043) #19	RBM7 (ENSG00000076053) #18	C11orf71 (ENSG00000180425) #17	NNMT (ENSG00000166741) #16	ZBTB16 (ENSG00000109906) #15	HTR3A (ENSG00000166736) #14	HTR3B (ENSG00000149305) #13	USP28 (ENSG00000048028) #12	CLDN25 (ENSG00000228607)	ZW10 (ENSG00000086827) #11	TMPRSS5 (ENSG00000166682) #10	DRD2 (ENSG00000149295) #8	ANKK1 (ENSG00000170209) #7	TTC12 (ENSG00000149292)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259.e #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00910000148725	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d.g.b #18	ENSGT00910000146938	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00530000063801.a.m.b.a	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8
Bonobo	MODERN SPECIES	2	RNF214 (ENSPPAG00000041137) #35	PCSK7 (ENSPPAG00000039272) #34	TAGLN (ENSPPAG00000041234) #33	SIDT2 (ENSPPAG00000029761) #32	PAFAH1B2 (ENSPPAG00000027377) #31	SIK3 (ENSPPAG00000036163) #30	APOA1 (ENSPPAG00000026972) #29	APOC3 (ENSPPAG00000016679) #28	APOA4 (ENSPPAG00000037193) #27	APOA5 (ENSPPAG00000040538) #26	ZPR1 (ENSPPAG00000035589) #25	BUD13 (ENSPPAG00000040801) #24	ENSPPAG00000029893	CADM1 (ENSPPAG00000036227) #23	NXPE2 (ENSPPAG00000028189) #22	ENSPPAG00000036856 #21	NXPE1 (ENSPPAG00000039026) #20	REXO2 (ENSPPAG00000039849) #19	RBM7 (ENSPPAG00000027572) #18	ENSPPAG00000038521	ENSPPAG00000027006 #17	NNMT (ENSPPAG00000029095) #16	ZBTB16 (ENSPPAG00000034578) #15	HTR3A (ENSPPAG00000023311) #14	HTR3B (ENSPPAG00000027697) #13	USP28 (ENSPPAG00000042077) #12	ENSPPAG00000029813	CLDN25 (ENSPPAG00000007965)	ZW10 (ENSPPAG00000031453) #11	TMPRSS5 (ENSPPAG00000038681) #10	DRD2 (ENSPPAG00000029985) #8
Chimpanzee	MODERN SPECIES	2	RNF214 (ENSPTRG00000004323) #35	PCSK7 (ENSPTRG00000004321) #34	TAGLN (ENSPTRG00000004320) #33	SIDT2 (ENSPTRG00000004319) #32	PAFAH1B2 (ENSPTRG00000004318) #31	SIK3 (ENSPTRG00000004317) #30	APOA1 (ENSPTRG00000004316) #29	APOC3 (ENSPTRG00000004315) #28	APOA4 (ENSPTRG00000004314) #27	APOA5 (ENSPTRG00000004313) #26	ZPR1 (ENSPTRG00000004312) #25	BUD13 (ENSPTRG00000004311) #24	ENSPTRG00000051389	CADM1 (ENSPTRG00000004310) #23	NXPE2 (ENSPTRG00000028394) #22	NXPE4 (ENSPTRG00000004308) #21	NXPE1 (ENSPTRG00000004307) #20	REXO2 (ENSPTRG00000004306) #19	RBM7 (ENSPTRG00000004305) #18	ENSPTRG00000044509	C11H11orf71 (ENSPTRG00000004304) #17	NNMT (ENSPTRG00000004303) #16	ZBTB16 (ENSPTRG00000004302) #15	HTR3A (ENSPTRG00000004301) #14	HTR3B (ENSPTRG00000004300) #13	USP28 (ENSPTRG00000004299) #12	ENSPTRG00000050654	CLDN25 (ENSPTRG00000041604)	ZW10 (ENSPTRG00000004297) #11	TMPRSS5 (ENSPTRG00000049624) #10	DRD2 (ENSPTRG00000004295) #8
Orangutan	MODERN SPECIES	2	BACE1 (ENSPPYG00000003912) #36	RNF214 (ENSPPYG00000003911) #35	TAGLN (ENSPPYG00000003909) #33	PCSK7 (ENSPPYG00000003910) #34	SIDT2 (ENSPPYG00000003908) #32	PAFAH1B2 (ENSPPYG00000003907) #31	SIK3 (ENSPPYG00000003905) #30	APOA1 (ENSPPYG00000003904) #29	ENSPPYG00000003903 #28	APOA4 (ENSPPYG00000003902) #27	APOA5 (ENSPPYG00000031421) #26	ZPR1 (ENSPPYG00000025914) #25	BUD13 (ENSPPYG00000003900) #24	CADM1 (ENSPPYG00000003899) #23	NXPE2 (ENSPPYG00000003898) #22	NXPE4 (ENSPPYG00000003897) #21	NXPE1 (ENSPPYG00000003896) #20	REXO2 (ENSPPYG00000003895) #19	RBM7 (ENSPPYG00000003894) #18	ENSPPYG00000003893 #17	NNMT (ENSPPYG00000003892) #16	ZBTB16 (ENSPPYG00000003891) #15	HTR3A (ENSPPYG00000003890) #14	HTR3B (ENSPPYG00000003889) #13	USP28 (ENSPPYG00000003888) #12	ZW10 (ENSPPYG00000003887) #11	TMPRSS5 (ENSPPYG00000003886) #10	DRD2 (ENSPPYG00000003885) #8	ANKK1 (ENSPPYG00000032703) #7	TTC12 (ENSPPYG00000003884)	NCAM1 (ENSPPYG00000003883)
Gibbon	MODERN SPECIES	5	ENSNLEG00000032623 #37	RNF214 (ENSNLEG00000007341) #35	PCSK7 (ENSNLEG00000007340) #34	TAGLN (ENSNLEG00000007339) #33	SIDT2 (ENSNLEG00000007338) #32	PAFAH1B2 (ENSNLEG00000032420) #31	SIK3 (ENSNLEG00000007336) #30	APOA1 (ENSNLEG00000007335) #29	APOC3 (ENSNLEG00000007334) #28	APOA4 (ENSNLEG00000007332) #27	APOA5 (ENSNLEG00000007331) #26	ZPR1 (ENSNLEG00000007330) #25	BUD13 (ENSNLEG00000007329) #24	CADM1 (ENSNLEG00000029493) #23	NXPE2 (ENSNLEG00000007327) #22	NXPE4 (ENSNLEG00000007326) #21	NXPE1 (ENSNLEG00000007325) #20	REXO2 (ENSNLEG00000029745) #19	RBM7 (ENSNLEG00000029494) #18	ENSNLEG00000029308 #17	NNMT (ENSNLEG00000007321) #16	ZBTB16 (ENSNLEG00000007319) #15	HTR3A (ENSNLEG00000007317) #14	HTR3B (ENSNLEG00000007316) #13	USP28 (ENSNLEG00000007313) #12	CLDN25 (ENSNLEG00000007312)	ZW10 (ENSNLEG00000032579) #11	TMPRSS5 (ENSNLEG00000007310) #10	DRD2 (ENSNLEG00000007309) #8	ANKK1 (ENSNLEG00000007308) #7	TTC12 (ENSNLEG00000007306)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Vervet Monkey	MODERN SPECIES		BACE1 (ENSCSAG00000002684) #36	RNF214 (ENSCSAG00000002685) #35	PCSK7 (ENSCSAG00000002686) #34	TAGLN (ENSCSAG00000002690) #33	SIDT2 (ENSCSAG00000002692) #32	PAFAH1B2 (ENSCSAG00000002695) #31	SIK3 (ENSCSAG00000002703) #30	APOA1 (ENSCSAG00000002709) #29	APOC3 (ENSCSAG00000002711) #28	APOA4 (ENSCSAG00000002712) #27	APOA5 (ENSCSAG00000002717) #26	ZPR1 (ENSCSAG00000002722) #25	BUD13 (ENSCSAG00000002732) #24	CADM1 (ENSCSAG00000002740) #23	NXPE2 (ENSCSAG00000002745) #22	NXPE4 (ENSCSAG00000002750) #21	NXPE1 (ENSCSAG00000002753) #20	REXO2 (ENSCSAG00000002754) #19	RBM7 (ENSCSAG00000002756) #18	C11orf71 (ENSCSAG00000000596) #17	NNMT (ENSCSAG00000002757) #16	ZBTB16 (ENSCSAG00000002761) #15	HTR3A (ENSCSAG00000002771) #14	HTR3B (ENSCSAG00000002779) #13	ENSCSAG00000002782	USP28 (ENSCSAG00000002785) #12	CLDN25 (ENSCSAG00000000597)	ZW10 (ENSCSAG00000002794) #11	TMPRSS5 (ENSCSAG00000002803) #10	DRD2 (ENSCSAG00000002807) #8	TTC12 (ENSCSAG00000002812)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Macaca	ANCESTRAL SPECIES	2	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00900000143310	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.a.a.a.a.b.b	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000049386	PCSK7 (ENSMFAG00000044470) #34	TAGLN (ENSMFAG00000036871) #33	SIDT2 (ENSMFAG00000032882) #32	ENSMFAG00000050007	ENSMFAG00000051964	SIK3 (ENSMFAG00000041223) #30	ENSMFAG00000001837	ENSMFAG00000042160 #29	APOA5 (ENSMFAG00000038810) #26	ZPR1 (ENSMFAG00000030506) #25	BUD13 (ENSMFAG00000036204) #24	ENSMFAG00000052640	CADM1 (ENSMFAG00000040148) #23	NXPE2 (ENSMFAG00000038999) #22	NXPE4 (ENSMFAG00000026064) #21	REXO2 (ENSMFAG00000041155) #19	RBM7 (ENSMFAG00000000965) #18	C11orf71 (ENSMFAG00000056584) #17	ENSMFAG00000048364	ENSMFAG00000050426	NNMT (ENSMFAG00000036328) #16	ZBTB16 (ENSMFAG00000008415) #15	ENSMFAG00000065596	HTR3A (ENSMFAG00000044451) #14	HTR3B (ENSMFAG00000002022) #13	USP28 (ENSMFAG00000042145) #12	ZW10 (ENSMFAG00000005588) #11	DRD2 (ENSMFAG00000043416) #8	TTC12 (ENSMFAG00000001067)	NCAM1 (ENSMFAG00000044864)
Rhesus	MODERN SPECIES	5	PCSK7 (ENSMMUG00000002061) #34	TAGLN (ENSMMUG00000002058) #33	SIDT2 (ENSMMUG00000002053) #32	PAFAH1B2 (ENSMMUG00000002050) #31	SIK3 (ENSMMUG00000016128) #30	APOA1 (ENSMMUG00000044545) #29	ENSMMUG00000060987	ENSMMUG00000056610	APOA4 (ENSMMUG00000016125) #27	APOA5 (ENSMMUG00000057425) #26	ZPR1 (ENSMMUG00000053039) #25	BUD13 (ENSMMUG00000020002) #24	ENSMMUG00000050683	CADM1 (ENSMMUG00000021628) #23	NXPE2 (ENSMMUG00000030902) #22	NXPE1 (ENSMMUG00000012268) #21	REXO2 (ENSMMUG00000012269) #19	RBM7 (ENSMMUG00000012270) #18	C14H11orf71 (ENSMMUG00000051785) #17	ENSMMUG00000052205	NNMT (ENSMMUG00000007086) #16	ZBTB16 (ENSMMUG00000007085) #15	HTR3A (ENSMMUG00000007080) #14	HTR3B (ENSMMUG00000007079) #13	USP28 (ENSMMUG00000023773) #12	CLDN25 (ENSMMUG00000053754)	ENSMMUG00000043523	ZW10 (ENSMMUG00000023772) #11	TMPRSS5 (ENSMMUG00000030906) #10	DRD2 (ENSMMUG00000014334) #8	TTC12 (ENSMMUG00000014328)
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cercopithecinae_d	ANCESTRAL SPECIES	45														ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00910000146938	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Sooty mangabey	MODERN SPECIES	138														CADM1 (ENSCATG00000034424) #23	NXPE2 (ENSCATG00000011895) #22	NXPE4 (ENSCATG00000033776) #21	NXPE1 (ENSCATG00000044822) #20	REXO2 (ENSCATG00000015278) #19	RBM7 (ENSCATG00000037361) #18	C11orf71 (ENSCATG00000040083) #17	ENSCATG00000020795	NNMT (ENSCATG00000034839) #16	ZBTB16 (ENSCATG00000039272) #15	HTR3A (ENSCATG00000034214) #14	HTR3B (ENSCATG00000044851) #13	USP28 (ENSCATG00000031506) #12	ZW10 (ENSCATG00000029954) #11	TMPRSS5 (ENSCATG00000039143) #10	DRD2 (ENSCATG00000040093) #8	ANKK1 (ENSCATG00000021625) #7	TTC12 (ENSCATG00000036329)
Drill	MODERN SPECIES	621													ENSMLEG00000004443	CADM1 (ENSMLEG00000033608) #23	NXPE2 (ENSMLEG00000000534) #22	NXPE4 (ENSMLEG00000044166) #21	NXPE1 (ENSMLEG00000032297) #20	REXO2 (ENSMLEG00000036571) #19	RBM7 (ENSMLEG00000041953) #18	C11orf71 (ENSMLEG00000042004) #17	NNMT (ENSMLEG00000040550) #16	ZBTB16 (ENSMLEG00000027152) #15	HTR3A (ENSMLEG00000038776) #14	HTR3B (ENSMLEG00000041346) #13	USP28 (ENSMLEG00000020953) #12	ZW10 (ENSMLEG00000031557) #11	ENSMLEG00000035644 #10	DRD2 (ENSMLEG00000044244) #8	ANKK1 (ENSMLEG00000030592) #7	TTC12 (ENSMLEG00000038689)	ENSMLEG00000041064
Olive baboon	MODERN SPECIES	3	RNF214 (ENSPANG00000010747) #35	PCSK7 (ENSPANG00000000210) #34	TAGLN (ENSPANG00000002535) #33	SIDT2 (ENSPANG00000018905) #32	PAFAH1B2 (ENSPANG00000015041) #31	SIK3 (ENSPANG00000019733) #30	APOA1 (ENSPANG00000008368) #29	APOC3 (ENSPANG00000008369) #28	APOA4 (ENSPANG00000003384) #27	ENSPANG00000038163	BUD13 (ENSPANG00000006431) #24	ENSPANG00000043017	ENSPANG00000049158	CADM1 (ENSPANG00000015042) #23	NXPE2 (ENSPANG00000004639) #22	NXPE4 (ENSPANG00000005599) #21	REXO2 (ENSPANG00000010675) #19	RBM7 (ENSPANG00000009431) #18	C11orf71 (ENSPANG00000008843) #17	NNMT (ENSPANG00000013188) #16	ZBTB16 (ENSPANG00000005924) #15	HTR3A (ENSPANG00000014346) #14	HTR3B (ENSPANG00000007181) #13	USP28 (ENSPANG00000019172) #12	ZW10 (ENSPANG00000019266) #11	TMPRSS5 (ENSPANG00000007319) #10	DRD2 (ENSPANG00000005708) #8	TTC12 (ENSPANG00000010676)	NCAM1 (ENSPANG00000016065)	PLET1 (ENSPANG00000006432)	PTS (ENSPANG00000024677)
Rhinopithecus	ANCESTRAL SPECIES	30	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306.u #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758	ENSGT00940000155743
Black snub-nosed monkey	MODERN SPECIES	722	ENSRBIG00000030215 #37	ENSRBIG00000029046 #35	PCSK7 (ENSRBIG00000034987) #34	TAGLN (ENSRBIG00000031507) #33	SIDT2 (ENSRBIG00000042199) #32	PAFAH1B2 (ENSRBIG00000035123) #31	SIK3 (ENSRBIG00000028314) #30	APOA1 (ENSRBIG00000044736) #29	APOC3 (ENSRBIG00000003998) #28	APOA4 (ENSRBIG00000027521) #27	APOA5 (ENSRBIG00000031722) #26	ZPR1 (ENSRBIG00000041749) #25	BUD13 (ENSRBIG00000001857) #24	CADM1 (ENSRBIG00000038512) #23	NXPE2 (ENSRBIG00000038016) #22	NXPE4 (ENSRBIG00000026591) #21	NXPE1 (ENSRBIG00000039952) #20	REXO2 (ENSRBIG00000037809) #19	RBM7 (ENSRBIG00000044762) #18	C11orf71 (ENSRBIG00000019664) #17	NNMT (ENSRBIG00000041263) #16	ZBTB16 (ENSRBIG00000035195) #15	HTR3A (ENSRBIG00000033910) #14	HTR3B (ENSRBIG00000044677) #13	USP28 (ENSRBIG00000044717) #12	ZW10 (ENSRBIG00000030358) #11	TMPRSS5 (ENSRBIG00000031311) #10	DRD2 (ENSRBIG00000027761) #8	ANKK1 (ENSRBIG00000028582) #7	TTC12 (ENSRBIG00000043217)	NCAM1 (ENSRBIG00000013766)
Golden snub-nosed monkey	MODERN SPECIES	1668															NXPE2 (ENSRROG00000040744) #22	NXPE4 (ENSRROG00000042339) #21	NXPE1 (ENSRROG00000044244) #20	REXO2 (ENSRROG00000038928) #19	RBM7 (ENSRROG00000032280) #18	C11orf71 (ENSRROG00000007675) #17	NNMT (ENSRROG00000036650) #16	ZBTB16 (ENSRROG00000036987) #15	HTR3A (ENSRROG00000035619) #14	HTR3B (ENSRROG00000031365) #13	USP28 (ENSRROG00000026490) #12	ENSRROG00000038644	ZW10 (ENSRROG00000031796) #11	TMPRSS5 (ENSRROG00000039822) #10
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c.a.a #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255.o #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000164522.c.b #9	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cebidae	ANCESTRAL SPECIES		ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c.a.a #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255.o #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000164522.c.b #9	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00910000146918 #37	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162.c.a.a #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a.c #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255.o #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000164522.c.b #9	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Capuchin	MODERN SPECIES	28	BACE1 (ENSCCAG00000037820) #36	RNF214 (ENSCCAG00000037316) #35	PCSK7 (ENSCCAG00000036429) #34	ENSCCAG00000029473 #33	SIDT2 (ENSCCAG00000027512) #32	PAFAH1B2 (ENSCCAG00000034687) #31	ENSCCAG00000036119 #30	APOA1 (ENSCCAG00000024621) #29	APOC3 (ENSCCAG00000001237) #28	APOA4 (ENSCCAG00000026719) #27	APOA5 (ENSCCAG00000033034) #26	ZPR1 (ENSCCAG00000028716) #25	BUD13 (ENSCCAG00000024422) #24	CADM1 (ENSCCAG00000032479) #23	NXPE2 (ENSCCAG00000016890) #22	NXPE4 (ENSCCAG00000027643) #21	NXPE1 (ENSCCAG00000032412) #20	REXO2 (ENSCCAG00000034979) #19	RBM7 (ENSCCAG00000036534) #18	C11orf71 (ENSCCAG00000033433) #17	NNMT (ENSCCAG00000019545) #16	ZBTB16 (ENSCCAG00000001377) #15	HTR3A (ENSCCAG00000022462) #14	HTR3B (ENSCCAG00000035522) #13	ENSCCAG00000032064 #12	ZW10 (ENSCCAG00000020627) #11	TMPRSS5 (ENSCCAG00000021473) #10	ENSCCAG00000028022 #9	DRD2 (ENSCCAG00000019854) #8	ANKK1 (ENSCCAG00000037007) #7	TTC12 (ENSCCAG00000034913)
Bolivian squirrel monkey	MODERN SPECIES	50	ENSSBOG00000028394	ENSSBOG00000031628	ENSSBOG00000018305	SIK3 (ENSSBOG00000033875) #30	ENSSBOG00000019734	APOA1 (ENSSBOG00000027691) #29	APOC3 (ENSSBOG00000029645) #28	APOA4 (ENSSBOG00000034589) #27	APOA5 (ENSSBOG00000034615) #26	ZPR1 (ENSSBOG00000018045) #25	BUD13 (ENSSBOG00000033988) #24	ENSSBOG00000034680	CADM1 (ENSSBOG00000035201) #23	ENSSBOG00000034681	NXPE2 (ENSSBOG00000022260) #22	NXPE4 (ENSSBOG00000023862) #21	NXPE1 (ENSSBOG00000027065) #20	REXO2 (ENSSBOG00000028651) #19	RBM7 (ENSSBOG00000027830) #18	ENSSBOG00000030536	NNMT (ENSSBOG00000032617) #16	ZBTB16 (ENSSBOG00000032604) #15	HTR3A (ENSSBOG00000018920) #14	HTR3B (ENSSBOG00000026069) #13	USP28 (ENSSBOG00000028488) #12	ZW10 (ENSSBOG00000006598) #11	TMPRSS5 (ENSSBOG00000021869) #10	ENSSBOG00000003976 #9	DRD2 (ENSSBOG00000004012) #8	ANKK1 (ENSSBOG00000020263) #7	TTC12 (ENSSBOG00000028986)
Tarsier	MODERN SPECIES	4566															NXPE2 (ENSTSYG00000006186) #22	NXPE4 (ENSTSYG00000010973) #21	NXPE1 (ENSTSYG00000004695) #20
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Mouse lemur	MODERN SPECIES	27	RNF214 (ENSMICG00000002383) #35	PCSK7 (ENSMICG00000002375) #34	TAGLN (ENSMICG00000002371) #33	SIDT2 (ENSMICG00000002357) #32	PAFAH1B2 (ENSMICG00000032949) #31	ENSMICG00000045255	SIK3 (ENSMICG00000002343) #30	APOA1 (ENSMICG00000002339) #29	APOC3 (ENSMICG00000047019) #28	APOA4 (ENSMICG00000002332) #27	APOA5 (ENSMICG00000046852) #26	ENSMICG00000002322 #25	BUD13 (ENSMICG00000002320) #24	CADM1 (ENSMICG00000002734) #23	ENSMICG00000032449	NXPE4 (ENSMICG00000004444) #21	ENSMICG00000048026	NXPE1 (ENSMICG00000014692) #20	REXO2 (ENSMICG00000010094) #19	RBM7 (ENSMICG00000042981) #18	C11orf71 (ENSMICG00000010085) #17	NNMT (ENSMICG00000027668) #16	ZBTB16 (ENSMICG00000010072) #15	HTR3A (ENSMICG00000010063) #14	ENSMICG00000043320	ENSMICG00000012975	ENSMICG00000047604	ENSMICG00000009837	AAMDC (ENSMICG00000000300)	ENSMICG00000045144	ENSMICG00000045490
Lemuriformes_a	ANCESTRAL SPECIES	22	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000161758	ENSGT00940000155743
Greater bamboo lemur	MODERN SPECIES	351	RNF214 (ENSPSMG00000000841) #35	PCSK7 (ENSPSMG00000000646) #34	TAGLN (ENSPSMG00000000551) #33	SIDT2 (ENSPSMG00000000504) #32	PAFAH1B2 (ENSPSMG00000000427) #31	SIK3 (ENSPSMG00000000370) #30	APOA1 (ENSPSMG00000000233) #29	APOC3 (ENSPSMG00000000205) #28	APOA4 (ENSPSMG00000000186) #27	ENSPSMG00000000176	APOA5 (ENSPSMG00000000169) #26	ENSPSMG00000000147 #25	ENSPSMG00000000094	BUD13 (ENSPSMG00000000086) #24	CADM1 (ENSPSMG00000023087) #23	NXPE4 (ENSPSMG00000022880) #21	NXPE1 (ENSPSMG00000022873) #20	REXO2 (ENSPSMG00000022850) #19	RBM7 (ENSPSMG00000022804) #18	C11orf71 (ENSPSMG00000022783) #17	NNMT (ENSPSMG00000022778) #16	ZBTB16 (ENSPSMG00000022771) #15	HTR3A (ENSPSMG00000022757) #14	ENSPSMG00000022726	HTR3B (ENSPSMG00000022720) #13	USP28 (ENSPSMG00000022691) #12	CLDN25 (ENSPSMG00000022639)	ZW10 (ENSPSMG00000022631) #11	TMPRSS5 (ENSPSMG00000022572) #10	DRD2 (ENSPSMG00000022465) #8	TTC12 (ENSPSMG00000022371)
Coquerels sifaka	MODERN SPECIES	760															CADM1 (ENSPCOG00000028587) #23	NXPE4 (ENSPCOG00000017129) #21	NXPE1 (ENSPCOG00000016490) #20	REXO2 (ENSPCOG00000027639) #19	ENSPCOG00000022719 #18	C11orf71 (ENSPCOG00000015231) #17	NNMT (ENSPCOG00000027693) #16	ZBTB16 (ENSPCOG00000004404) #15	HTR3A (ENSPCOG00000025438) #14	HTR3B (ENSPCOG00000013139) #13	ENSPCOG00000019270	USP28 (ENSPCOG00000018279) #12	ZW10 (ENSPCOG00000020599) #11	TMPRSS5 (ENSPCOG00000006628) #10	DRD2 (ENSPCOG00000007514) #8	TTC12 (ENSPCOG00000024368)	NCAM1 (ENSPCOG00000022925)
Bushbaby	MODERN SPECIES	201							SIK3 (ENSOGAG00000026497) #30	APOA1 (ENSOGAG00000026815) #29	APOC3 (ENSOGAG00000009983) #28	APOA4 (ENSOGAG00000029288) #27	APOA5 (ENSOGAG00000025290) #26	ZPR1 (ENSOGAG00000009977) #25	BUD13 (ENSOGAG00000009973) #24	CADM1 (ENSOGAG00000002041) #23	NXPE2 (ENSOGAG00000013432) #22	NXPE4 (ENSOGAG00000013423) #21	NXPE1 (ENSOGAG00000013418) #20	REXO2 (ENSOGAG00000016860) #19	RBM7 (ENSOGAG00000016857) #18	C11orf71 (ENSOGAG00000016855) #17	NNMT (ENSOGAG00000031697) #16	ZBTB16 (ENSOGAG00000033673) #15	HTR3A (ENSOGAG00000004319) #14	HTR3B (ENSOGAG00000004318) #13	USP28 (ENSOGAG00000004313) #12	CLDN25 (ENSOGAG00000024445)	ZW10 (ENSOGAG00000011584) #11	TMPRSS5 (ENSOGAG00000026392) #10	ENSOGAG00000007401	DRD2 (ENSOGAG00000006407) #8	TTC12 (ENSOGAG00000006402)
Atlantogenata	ANCESTRAL SPECIES	40						ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Xenarthra	ANCESTRAL SPECIES	133						ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00390000015395 #28	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00520000058142	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.g.d #22	ENSGT00950000182866.D.c.h #21	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000163940	ENSGT00390000016427 #11	ENSGT00940000159163 #10
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2292					SIK3 (ENSDNOG00000005844) #30	APOA1 (ENSDNOG00000025887) #29	ENSDNOG00000041675 #28	APOA4 (ENSDNOG00000035392) #27	APOA5 (ENSDNOG00000007328) #26	ZPR1 (ENSDNOG00000007318) #25	BUD13 (ENSDNOG00000042988) #24	ENSDNOG00000045803	CADM1 (ENSDNOG00000031312) #23	NXPE2 (ENSDNOG00000024941) #22	ENSDNOG00000044479 #21	ENSDNOG00000046907 #21	NXPE1 (ENSDNOG00000006452) #20	REXO2 (ENSDNOG00000046533) #19	RBM7 (ENSDNOG00000018423) #18	C11orf71 (ENSDNOG00000018420) #17	ZBTB16 (ENSDNOG00000047356) #15	HTR3A (ENSDNOG00000012807) #14	HTR3B (ENSDNOG00000012801) #13	USP28 (ENSDNOG00000003292) #12	CLDN25 (ENSDNOG00000032955)	ZW10 (ENSDNOG00000043541) #11	TMPRSS5 (ENSDNOG00000019650) #10
Armadillo	MODERN SPECIES	2292						SIK3 (ENSDNOG00000005844) #30	APOA1 (ENSDNOG00000025887) #29	ENSDNOG00000041675 #28	APOA4 (ENSDNOG00000035392) #27	APOA5 (ENSDNOG00000007328) #26	ZPR1 (ENSDNOG00000007318) #25	BUD13 (ENSDNOG00000042988) #24	ENSDNOG00000045803	CADM1 (ENSDNOG00000031312) #23	NXPE2 (ENSDNOG00000024941) #22	ENSDNOG00000044479 #21	ENSDNOG00000046907 #21	NXPE1 (ENSDNOG00000006452) #20	REXO2 (ENSDNOG00000046533) #19	RBM7 (ENSDNOG00000018423) #18	C11orf71 (ENSDNOG00000018420) #17	ZBTB16 (ENSDNOG00000047356) #15	HTR3A (ENSDNOG00000012807) #14	HTR3B (ENSDNOG00000012801) #13	USP28 (ENSDNOG00000003292) #12	CLDN25 (ENSDNOG00000032955)	ZW10 (ENSDNOG00000043541) #11	TMPRSS5 (ENSDNOG00000019650) #10
Sloth	MODERN SPECIES	3042																NXPE4 (ENSCHOG00000012229) #21
Afrotheria	ANCESTRAL SPECIES	51	ENSGT00940000153062.A.b.b	ENSGT00940000155354	ENSGT00950000183078.b.a.b.h	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c.i.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17
Afrotheria_a	ANCESTRAL SPECIES	46	ENSGT00940000155354	ENSGT00950000183078.b.a.b.g	ENSGT00950000183078.b.a.b.h	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.C #27	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.h #21	ENSGT00950000182866.D.c.g.c.i.a #20	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000007962 #17	ENSGT00390000011708.a.k.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
Elephant	MODERN SPECIES	464	DSCAML1 (ENSLAFG00000021385)	ENSLAFG00000011846	ENSLAFG00000030461	BACE1 (ENSLAFG00000003835) #36	RNF214 (ENSLAFG00000003831) #35	PCSK7 (ENSLAFG00000003821) #34	TAGLN (ENSLAFG00000003818) #33	SIDT2 (ENSLAFG00000030954) #32	SIK3 (ENSLAFG00000023141) #30	APOC3 (ENSLAFG00000030709) #28	APOA4 (ENSLAFG00000002446) #27	APOA5 (ENSLAFG00000010292) #26	ZPR1 (ENSLAFG00000010288) #25	BUD13 (ENSLAFG00000010279) #24	CADM1 (ENSLAFG00000008937) #23	NXPE4 (ENSLAFG00000004906) #21	ENSLAFG00000030693 #20	REXO2 (ENSLAFG00000012451) #19	RBM7 (ENSLAFG00000012444) #18	C11orf71 (ENSLAFG00000012441) #17	NNMT (ENSLAFG00000012440) #16	ZBTB16 (ENSLAFG00000014626) #15	HTR3A (ENSLAFG00000007587) #14	HTR3B (ENSLAFG00000007584) #13	USP28 (ENSLAFG00000017565) #12	ZW10 (ENSLAFG00000001253) #11	ENSLAFG00000025586 #10	ENSLAFG00000031479	DRD2 (ENSLAFG00000006523) #8	ANKK1 (ENSLAFG00000025747) #7	TTC12 (ENSLAFG00000017571)
Hyrax	MODERN SPECIES	2747																ENSPCAG00000013550 #21
Tenrec	MODERN SPECIES	14836																NXPE4 (ENSETEG00000020120) #21
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	DUPLICATION
Platypus	MODERN SPECIES	2	SDHD (ENSOANG00000045802)	ENSOANG00000046225	BCO2 (ENSOANG00000047779)	PTS (ENSOANG00000050402)	NCAM1 (ENSOANG00000012271)	ENSOANG00000010971	DRD2 (ENSOANG00000010970) #8	ENSOANG00000046817 #10	ZW10 (ENSOANG00000014313) #11	USP28 (ENSOANG00000036341) #12	ENSOANG00000019767 #13	HTR3A (ENSOANG00000015811) #14	ZBTB16 (ENSOANG00000049678) #15	NNMT (ENSOANG00000047239) #16	RBM7 (ENSOANG00000001754) #18	ENSOANG00000013471 #22	ENSOANG00000039384 #22	ENSOANG00000038092 #22	ENSOANG00000013472 #22	ENSOANG00000047819 #22	CADM1 (ENSOANG00000048135) #23	BUD13 (ENSOANG00000038767) #24	ZPR1 (ENSOANG00000009914) #25	ENSOANG00000045327 #27	ENSOANG00000046282 #28	ENSOANG00000043746 #29	SIK3 (ENSOANG00000015712) #30	PAFAH1B2 (ENSOANG00000038644) #31	SIDT2 (ENSOANG00000046083) #32	TAGLN (ENSOANG00000007208) #33	PCSK7 (ENSOANG00000047725) #34
Platypus	MODERN SPECIES	2	ENSOANG00000046225	BCO2 (ENSOANG00000047779)	PTS (ENSOANG00000050402)	NCAM1 (ENSOANG00000012271)	ENSOANG00000010971	DRD2 (ENSOANG00000010970) #8	ENSOANG00000046817 #10	ZW10 (ENSOANG00000014313) #11	USP28 (ENSOANG00000036341) #12	ENSOANG00000019767 #13	HTR3A (ENSOANG00000015811) #14	ZBTB16 (ENSOANG00000049678) #15	NNMT (ENSOANG00000047239) #16	RBM7 (ENSOANG00000001754) #18	ENSOANG00000013471 #22	ENSOANG00000039384 #22	ENSOANG00000038092 #22	ENSOANG00000013472 #22	ENSOANG00000047819 #22	CADM1 (ENSOANG00000048135) #23	BUD13 (ENSOANG00000038767) #24	ZPR1 (ENSOANG00000009914) #25	ENSOANG00000045327 #27	ENSOANG00000046282 #28	ENSOANG00000043746 #29	SIK3 (ENSOANG00000015712) #30	PAFAH1B2 (ENSOANG00000038644) #31	SIDT2 (ENSOANG00000046083) #32	TAGLN (ENSOANG00000007208) #33	PCSK7 (ENSOANG00000047725) #34	RNF214 (ENSOANG00000014350) #35
Platypus	MODERN SPECIES	2	DSCAML1 (ENSOANG00000037926)	ENSOANG00000011542	BACE1 (ENSOANG00000014353) #36	RNF214 (ENSOANG00000014350) #35	PCSK7 (ENSOANG00000047725) #34	TAGLN (ENSOANG00000007208) #33	SIDT2 (ENSOANG00000046083) #32	PAFAH1B2 (ENSOANG00000038644) #31	SIK3 (ENSOANG00000015712) #30	ENSOANG00000043746 #29	ENSOANG00000046282 #28	ENSOANG00000045327 #27	ZPR1 (ENSOANG00000009914) #25	BUD13 (ENSOANG00000038767) #24	CADM1 (ENSOANG00000048135) #23	ENSOANG00000047819 #22	ENSOANG00000013472 #22	ENSOANG00000038092 #22	ENSOANG00000039384 #22	ENSOANG00000013471 #22	RBM7 (ENSOANG00000001754) #18	NNMT (ENSOANG00000047239) #16	ZBTB16 (ENSOANG00000049678) #15	HTR3A (ENSOANG00000015811) #14	ENSOANG00000019767 #13	USP28 (ENSOANG00000036341) #12	ZW10 (ENSOANG00000014313) #11	ENSOANG00000046817 #10	DRD2 (ENSOANG00000010970) #8	ENSOANG00000010971	NCAM1 (ENSOANG00000012271)
Platypus	DUPLICATION
Platypus	MODERN SPECIES	2	BACE1 (ENSOANG00000014353) #36	RNF214 (ENSOANG00000014350) #35	PCSK7 (ENSOANG00000047725) #34	TAGLN (ENSOANG00000007208) #33	SIDT2 (ENSOANG00000046083) #32	PAFAH1B2 (ENSOANG00000038644) #31	SIK3 (ENSOANG00000015712) #30	ENSOANG00000043746 #29	ENSOANG00000046282 #28	ENSOANG00000045327 #27	ZPR1 (ENSOANG00000009914) #25	BUD13 (ENSOANG00000038767) #24	CADM1 (ENSOANG00000048135) #23	ENSOANG00000047819 #22	ENSOANG00000013472 #22	ENSOANG00000038092 #22	ENSOANG00000039384 #22	ENSOANG00000013471 #22	RBM7 (ENSOANG00000001754) #18	NNMT (ENSOANG00000047239) #16	ZBTB16 (ENSOANG00000049678) #15	HTR3A (ENSOANG00000015811) #14	ENSOANG00000019767 #13	USP28 (ENSOANG00000036341) #12	ZW10 (ENSOANG00000014313) #11	ENSOANG00000046817 #10	DRD2 (ENSOANG00000010970) #8	ENSOANG00000010971	NCAM1 (ENSOANG00000012271)	PTS (ENSOANG00000050402)	BCO2 (ENSOANG00000047779)
Platypus	MODERN SPECIES	2	ENSOANG00000011542	BACE1 (ENSOANG00000014353) #36	RNF214 (ENSOANG00000014350) #35	PCSK7 (ENSOANG00000047725) #34	TAGLN (ENSOANG00000007208) #33	SIDT2 (ENSOANG00000046083) #32	PAFAH1B2 (ENSOANG00000038644) #31	SIK3 (ENSOANG00000015712) #30	ENSOANG00000043746 #29	ENSOANG00000046282 #28	ENSOANG00000045327 #27	ZPR1 (ENSOANG00000009914) #25	BUD13 (ENSOANG00000038767) #24	CADM1 (ENSOANG00000048135) #23	ENSOANG00000047819 #22	ENSOANG00000013472 #22	ENSOANG00000038092 #22	ENSOANG00000039384 #22	ENSOANG00000013471 #22	RBM7 (ENSOANG00000001754) #18	NNMT (ENSOANG00000047239) #16	ZBTB16 (ENSOANG00000049678) #15	HTR3A (ENSOANG00000015811) #14	ENSOANG00000019767 #13	USP28 (ENSOANG00000036341) #12	ZW10 (ENSOANG00000014313) #11	ENSOANG00000046817 #10	DRD2 (ENSOANG00000010970) #8	ENSOANG00000010971	NCAM1 (ENSOANG00000012271)	PTS (ENSOANG00000050402)
Sauria	ANCESTRAL SPECIES	31	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000175256	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257
Lepidosauria	DUPLICATION
Lepidosauria	ANCESTRAL SPECIES	20	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.e #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000175256	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257
Episquamata	ANCESTRAL SPECIES	12	ENSGT00530000063764.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.e #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743
Laterata	ANCESTRAL SPECIES	15	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00990000213104	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c.e #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.i.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257	ENSGT00940000155743
Common wall lizard	DUPLICATION
Common wall lizard	DUPLICATION
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	6	PCSK7 (ENSPMRG00000019786) #34	ENSPMRG00000019741 #33	ENSPMRG00000019591	SIDT2 (ENSPMRG00000018985) #32	PAFAH1B2 (ENSPMRG00000018844) #31	SIK3 (ENSPMRG00000018695) #30	APOA1 (ENSPMRG00000018653) #29	ENSPMRG00000018650	APOA4 (ENSPMRG00000018646) #27	ENSPMRG00000018644	APOA5 (ENSPMRG00000018640) #26	ZPR1 (ENSPMRG00000018586) #25	BUD13 (ENSPMRG00000018571) #24	ENSPMRG00000018563	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018536 #22	ENSPMRG00000018534 #22	ENSPMRG00000018529 #22	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018472 #16	ENSPMRG00000018461 #16	ENSPMRG00000018443 #16	ENSPMRG00000018433 #16	ENSPMRG00000018428 #22	ENSPMRG00000018421 #22	ENSPMRG00000018417 #22	ENSPMRG00000023499 #22	ENSPMRG00000023495 #22	ENSPMRG00000023494	ZBTB16 (ENSPMRG00000023489) #15	HTR3A (ENSPMRG00000023485) #14
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000019591	SIDT2 (ENSPMRG00000018985) #32	PAFAH1B2 (ENSPMRG00000018844) #31	SIK3 (ENSPMRG00000018695) #30	APOA1 (ENSPMRG00000018653) #29	ENSPMRG00000018650	APOA4 (ENSPMRG00000018646) #27	ENSPMRG00000018644	APOA5 (ENSPMRG00000018640) #26	ZPR1 (ENSPMRG00000018586) #25	BUD13 (ENSPMRG00000018571) #24	ENSPMRG00000018563	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018536 #22	ENSPMRG00000018534 #22	ENSPMRG00000018529 #22	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018472 #16	ENSPMRG00000018461 #16	ENSPMRG00000018443 #16	ENSPMRG00000018433 #16	ENSPMRG00000018428 #22	ENSPMRG00000018421 #22	ENSPMRG00000018417 #22	ENSPMRG00000023499 #22	ENSPMRG00000023495 #22	ENSPMRG00000023494	ZBTB16 (ENSPMRG00000023489) #15	HTR3A (ENSPMRG00000023485) #14	HTR3B (ENSPMRG00000023477) #13	USP28 (ENSPMRG00000023454) #12
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000019741 #33	ENSPMRG00000019591	SIDT2 (ENSPMRG00000018985) #32	PAFAH1B2 (ENSPMRG00000018844) #31	SIK3 (ENSPMRG00000018695) #30	APOA1 (ENSPMRG00000018653) #29	ENSPMRG00000018650	APOA4 (ENSPMRG00000018646) #27	ENSPMRG00000018644	APOA5 (ENSPMRG00000018640) #26	ZPR1 (ENSPMRG00000018586) #25	BUD13 (ENSPMRG00000018571) #24	ENSPMRG00000018563	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018536 #22	ENSPMRG00000018534 #22	ENSPMRG00000018529 #22	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018472 #16	ENSPMRG00000018461 #16	ENSPMRG00000018443 #16	ENSPMRG00000018433 #16	ENSPMRG00000018428 #22	ENSPMRG00000018421 #22	ENSPMRG00000018417 #22	ENSPMRG00000023499 #22	ENSPMRG00000023495 #22	ENSPMRG00000023494	ZBTB16 (ENSPMRG00000023489) #15	HTR3A (ENSPMRG00000023485) #14	HTR3B (ENSPMRG00000023477) #13
Common wall lizard	DUPLICATION
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	6	NCAM1 (ENSPMRG00000023386)	ENSPMRG00000023404	ENSPMRG00000023406	ANKK1 (ENSPMRG00000023409) #7	DRD2 (ENSPMRG00000023410) #8	ENSPMRG00000023418 #10	ZW10 (ENSPMRG00000023428) #11	ENSPMRG00000023438	ENSPMRG00000023443	USP28 (ENSPMRG00000023454) #12	HTR3B (ENSPMRG00000023477) #13	HTR3A (ENSPMRG00000023485) #14	ZBTB16 (ENSPMRG00000023489) #15	ENSPMRG00000023494	ENSPMRG00000023495 #22	ENSPMRG00000023499 #22	ENSPMRG00000018417 #22	ENSPMRG00000018421 #22	ENSPMRG00000018428 #22	ENSPMRG00000018433 #16	ENSPMRG00000018443 #16	ENSPMRG00000018461 #16	ENSPMRG00000018472 #16	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018529 #22	ENSPMRG00000018534 #22	ENSPMRG00000018536 #22	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018563	BUD13 (ENSPMRG00000018571) #24	ZPR1 (ENSPMRG00000018586) #25
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000023344	NCAM1 (ENSPMRG00000023386)	ENSPMRG00000023404	ENSPMRG00000023406	ANKK1 (ENSPMRG00000023409) #7	DRD2 (ENSPMRG00000023410) #8	ENSPMRG00000023418 #10	ZW10 (ENSPMRG00000023428) #11	ENSPMRG00000023438	ENSPMRG00000023443	USP28 (ENSPMRG00000023454) #12	HTR3B (ENSPMRG00000023477) #13	HTR3A (ENSPMRG00000023485) #14	ZBTB16 (ENSPMRG00000023489) #15	ENSPMRG00000023494	ENSPMRG00000023495 #22	ENSPMRG00000023499 #22	ENSPMRG00000018417 #22	ENSPMRG00000018421 #22	ENSPMRG00000018428 #22	ENSPMRG00000018433 #16	ENSPMRG00000018443 #16	ENSPMRG00000018461 #16	ENSPMRG00000018472 #16	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018529 #22	ENSPMRG00000018534 #22	ENSPMRG00000018536 #22	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018563	BUD13 (ENSPMRG00000018571) #24
Common wall lizard	DUPLICATION
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000023404	ENSPMRG00000023406	ANKK1 (ENSPMRG00000023409) #7	DRD2 (ENSPMRG00000023410) #8	ENSPMRG00000023418 #10	ZW10 (ENSPMRG00000023428) #11	ENSPMRG00000023438	ENSPMRG00000023443	USP28 (ENSPMRG00000023454) #12	HTR3B (ENSPMRG00000023477) #13	HTR3A (ENSPMRG00000023485) #14	ZBTB16 (ENSPMRG00000023489) #15	ENSPMRG00000023494	ENSPMRG00000023495 #22	ENSPMRG00000023499 #22	ENSPMRG00000018417 #22	ENSPMRG00000018421 #22	ENSPMRG00000018428 #22	ENSPMRG00000018433 #16	ENSPMRG00000018443 #16	ENSPMRG00000018461 #16	ENSPMRG00000018472 #16	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018529 #22	ENSPMRG00000018534 #22	ENSPMRG00000018536 #22	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018563	BUD13 (ENSPMRG00000018571) #24	ZPR1 (ENSPMRG00000018586) #25	APOA5 (ENSPMRG00000018640) #26
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000023406	ANKK1 (ENSPMRG00000023409) #7	DRD2 (ENSPMRG00000023410) #8	ENSPMRG00000023418 #10	ZW10 (ENSPMRG00000023428) #11	ENSPMRG00000023438	ENSPMRG00000023443	USP28 (ENSPMRG00000023454) #12	HTR3B (ENSPMRG00000023477) #13	HTR3A (ENSPMRG00000023485) #14	ZBTB16 (ENSPMRG00000023489) #15	ENSPMRG00000023494	ENSPMRG00000023495 #22	ENSPMRG00000023499 #22	ENSPMRG00000018417 #22	ENSPMRG00000018421 #22	ENSPMRG00000018428 #22	ENSPMRG00000018433 #16	ENSPMRG00000018443 #16	ENSPMRG00000018461 #16	ENSPMRG00000018472 #16	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018529 #22	ENSPMRG00000018534 #22	ENSPMRG00000018536 #22	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018563	BUD13 (ENSPMRG00000018571) #24	ZPR1 (ENSPMRG00000018586) #25	APOA5 (ENSPMRG00000018640) #26	ENSPMRG00000018644
Common wall lizard	MODERN SPECIES	6	ANKK1 (ENSPMRG00000023409) #7	DRD2 (ENSPMRG00000023410) #8	ENSPMRG00000023418 #10	ZW10 (ENSPMRG00000023428) #11	ENSPMRG00000023438	ENSPMRG00000023443	USP28 (ENSPMRG00000023454) #12	HTR3B (ENSPMRG00000023477) #13	HTR3A (ENSPMRG00000023485) #14	ZBTB16 (ENSPMRG00000023489) #15	ENSPMRG00000023494	ENSPMRG00000023495 #22	ENSPMRG00000023499 #22	ENSPMRG00000018417 #22	ENSPMRG00000018421 #22	ENSPMRG00000018428 #22	ENSPMRG00000018433 #16	ENSPMRG00000018443 #16	ENSPMRG00000018461 #16	ENSPMRG00000018472 #16	REXO2 (ENSPMRG00000018501) #19	ENSPMRG00000018529 #22	ENSPMRG00000018534 #22	ENSPMRG00000018536 #22	CADM1 (ENSPMRG00000018549) #23	ENSPMRG00000018563	BUD13 (ENSPMRG00000018571) #24	ZPR1 (ENSPMRG00000018586) #25	APOA5 (ENSPMRG00000018640) #26	ENSPMRG00000018644	APOA4 (ENSPMRG00000018646) #27
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	42	ENSSMRG00000021433	APOA4 (ENSSMRG00000021432) #27	ENSSMRG00000021431	ENSSMRG00000021430	BUD13 (ENSSMRG00000021429) #24	CADM1 (ENSSMRG00000021418) #23	ENSSMRG00000021417	REXO2 (ENSSMRG00000021416) #19	RBM7 (ENSSMRG00000021415) #18	ENSSMRG00000021414 #16	ENSSMRG00000021413 #16	ENSSMRG00000021396 #16	ENSSMRG00000021395 #16	ENSSMRG00000021394 #16	ENSSMRG00000021393 #22	ENSSMRG00000021392 #22	ENSSMRG00000021391 #22	ZBTB16 (ENSSMRG00000021389) #15	HTR3A (ENSSMRG00000021388) #14	USP28 (ENSSMRG00000021382) #12	ENSSMRG00000021381	ENSSMRG00000021380	ZW10 (ENSSMRG00000021379) #11	ENSSMRG00000021378 #10	DRD2 (ENSSMRG00000021316) #8	ENSSMRG00000021314	NCAM1 (ENSSMRG00000021312)	ENSSMRG00000021310	PTS (ENSSMRG00000021309)	ENSSMRG00000021308	BCO2 (ENSSMRG00000021307)
Argentine black and white tegu	MODERN SPECIES	42	APOA1 (ENSSMRG00000021434) #29	ENSSMRG00000021433	APOA4 (ENSSMRG00000021432) #27	ENSSMRG00000021431	ENSSMRG00000021430	BUD13 (ENSSMRG00000021429) #24	CADM1 (ENSSMRG00000021418) #23	ENSSMRG00000021417	REXO2 (ENSSMRG00000021416) #19	RBM7 (ENSSMRG00000021415) #18	ENSSMRG00000021414 #16	ENSSMRG00000021413 #16	ENSSMRG00000021396 #16	ENSSMRG00000021395 #16	ENSSMRG00000021394 #16	ENSSMRG00000021393 #22	ENSSMRG00000021392 #22	ENSSMRG00000021391 #22	ZBTB16 (ENSSMRG00000021389) #15	HTR3A (ENSSMRG00000021388) #14	USP28 (ENSSMRG00000021382) #12	ENSSMRG00000021381	ENSSMRG00000021380	ZW10 (ENSSMRG00000021379) #11	ENSSMRG00000021378 #10	DRD2 (ENSSMRG00000021316) #8	ENSSMRG00000021314	NCAM1 (ENSSMRG00000021312)	ENSSMRG00000021310	PTS (ENSSMRG00000021309)	ENSSMRG00000021308
Argentine black and white tegu	MODERN SPECIES	42	IL18 (ENSSMRG00000021306)	BCO2 (ENSSMRG00000021307)	ENSSMRG00000021308	PTS (ENSSMRG00000021309)	ENSSMRG00000021310	NCAM1 (ENSSMRG00000021312)	ENSSMRG00000021314	DRD2 (ENSSMRG00000021316) #8	ENSSMRG00000021378 #10	ZW10 (ENSSMRG00000021379) #11	ENSSMRG00000021380	ENSSMRG00000021381	USP28 (ENSSMRG00000021382) #12	HTR3A (ENSSMRG00000021388) #14	ZBTB16 (ENSSMRG00000021389) #15	ENSSMRG00000021391 #22	ENSSMRG00000021392 #22	ENSSMRG00000021393 #22	ENSSMRG00000021394 #16	ENSSMRG00000021395 #16	ENSSMRG00000021396 #16	ENSSMRG00000021413 #16	ENSSMRG00000021414 #16	RBM7 (ENSSMRG00000021415) #18	REXO2 (ENSSMRG00000021416) #19	ENSSMRG00000021417	CADM1 (ENSSMRG00000021418) #23	BUD13 (ENSSMRG00000021429) #24	ENSSMRG00000021430	ENSSMRG00000021431	APOA4 (ENSSMRG00000021432) #27
Toxicofera	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.e #22
Lizard	DUPLICATION
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1324															ENSACAG00000002572 #22	ENSACAG00000000282 #22	ENSACAG00000002563 #16	ENSACAG00000002537 #16	ENSACAG00000042083 #16	ENSACAG00000036280 #16	ENSACAG00000002552 #16	ENSACAG00000022866 #16	ENSACAG00000002533 #16	HINFP (ENSACAG00000002495)	ABCG4 (ENSACAG00000002324)	NLRX1 (ENSACAG00000002300)	ENSACAG00000002273	ENSACAG00000036588
Lizard	MODERN SPECIES	1324																ENSACAG00000002572 #22	ENSACAG00000000282 #22	ENSACAG00000002563 #16	ENSACAG00000002537 #16	ENSACAG00000042083 #16	ENSACAG00000036280 #16	ENSACAG00000002552 #16	ENSACAG00000022866 #16	ENSACAG00000002533 #16	HINFP (ENSACAG00000002495)	ABCG4 (ENSACAG00000002324)	NLRX1 (ENSACAG00000002300)	ENSACAG00000002273	ENSACAG00000036588
Lizard	MODERN SPECIES	1399													ENSACAG00000012809	ENSACAG00000012848	ENSACAG00000012883	ENSACAG00000012930 #22	ENSACAG00000012955	ENSACAG00000012960
tuatara	MODERN SPECIES	814															ENSSPUG00000006204 #22	ENSSPUG00000006148 #22	ENSSPUG00000006089 #16	ENSSPUG00000006054 #16	ENSSPUG00000006048 #16	RBM7 (ENSSPUG00000006032) #18	REXO2 (ENSSPUG00000006005) #19	CADM1 (ENSSPUG00000005747) #23	ENSSPUG00000005694	BUD13 (ENSSPUG00000005673) #24	ZPR1 (ENSSPUG00000005660) #25	APOA4 (ENSSPUG00000005634) #27	APOA1 (ENSSPUG00000005629) #29	SIK3 (ENSSPUG00000005617) #30	ENSSPUG00000005603	PAFAH1B2 (ENSSPUG00000005587) #31	ENSSPUG00000005450 #32
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.f #22
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1213	SIPA1 (ENSSPUG00000010162)	ENSSPUG00000010131	EHBP1L1 (ENSSPUG00000010122)	ENSSPUG00000010108	MAP3K11 (ENSSPUG00000010050)	PCNX3 (ENSSPUG00000009894)	NCAM1 (ENSSPUG00000009819)	ENSSPUG00000009798	ANKK1 (ENSSPUG00000009781) #7	DRD2 (ENSSPUG00000009618) #8	ZW10 (ENSSPUG00000009497) #11	USP28 (ENSSPUG00000009463) #12	ENSSPUG00000009442	HTR3B (ENSSPUG00000009377) #13	HTR3A (ENSSPUG00000009348) #14	ENSSPUG00000009284 #22
tuatara	MODERN SPECIES	814																ENSSPUG00000006204 #22	ENSSPUG00000006148 #22	ENSSPUG00000006089 #16	ENSSPUG00000006054 #16	ENSSPUG00000006048 #16	RBM7 (ENSSPUG00000006032) #18	REXO2 (ENSSPUG00000006005) #19	CADM1 (ENSSPUG00000005747) #23	ENSSPUG00000005694	BUD13 (ENSSPUG00000005673) #24	ZPR1 (ENSSPUG00000005660) #25	APOA4 (ENSSPUG00000005634) #27	APOA1 (ENSSPUG00000005629) #29	SIK3 (ENSSPUG00000005617) #30	ENSSPUG00000005603	PAFAH1B2 (ENSSPUG00000005587) #31
Archelosauria	ANCESTRAL SPECIES	31	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.a.a #16	ENSGT00390000011708.a.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257
Cryptodira	ANCESTRAL SPECIES	32	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00960000189567	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.a.a #16	ENSGT00390000011708.a.b.d.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257
Testudinoidea	ANCESTRAL SPECIES	29	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00390000011708.a.a.a #16	ENSGT00390000011708.a.b.d.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000159163 #10	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000164257
Emydidae	ANCESTRAL SPECIES	42	ENSGT00950000183078.b.a.b	ENSGT00940000157786 #36	ENSGT00940000159470 #35	ENSGT00940000157676 #34	ENSGT00940000155162 #33	ENSGT00390000010091.c #32	ENSGT00950000183199.a.a #31	ENSGT00940000157259 #30	ENSGT00950000182929.A #29	ENSGT00950000182929.C #27	ENSGT00900000143310	ENSGT00950000182929.D #26	ENSGT00390000005306 #25	ENSGT00390000014500 #24	ENSGT00940000156093 #23	ENSGT00950000182866.D.c #22	ENSGT00390000009255 #19	ENSGT00870000136493.d #18	ENSGT00990000204269	ENSGT00390000011708.a.a.a #16	ENSGT00390000011708.a.b.d.b #16	ENSGT00940000154616.b #15	ENSGT00940000157705.l #14	ENSGT00940000158478 #13	ENSGT00940000157670 #12	ENSGT00940000161922.i.a	ENSGT01080000257365.b.a.a.a	ENSGT00390000016427 #11	ENSGT00940000155539.a.a #8	ENSGT00940000162060 #7	ENSGT00940000161758
painted turtle	MODERN SPECIES	797	DLAT (ENSCPBG00000009013)	DIXDC1 (ENSCPBG00000009038)	HSPB2 (ENSCPBG00000009065)	ENSCPBG00000009069	CRYAB (ENSCPBG00000009073)	CFAP68 (ENSCPBG00000009078)	FDXACB1 (ENSCPBG00000009087)	ALG9 (ENSCPBG00000009091)	SIK2 (ENSCPBG00000009104)	LAYN (ENSCPBG00000009113)	ENSCPBG00000009118	BTG4 (ENSCPBG00000009131)	POU2AF1 (ENSCPBG00000009141)	ZW10 (ENSCPBG00000009179) #11	CADM1 (ENSCPBG00000009354) #23	ENSCPBG00000009357 #22	REXO2 (ENSCPBG00000009359) #19	RBM7 (ENSCPBG00000009366) #18	ENSCPBG00000009369	ENSCPBG00000009370 #16	ENSCPBG00000009372 #16	ZBTB16 (ENSCPBG00000009377) #15	ENSCPBG00000009380 #14	ENSCPBG00000009382 #14	HTR3B (ENSCPBG00000009386) #13	USP28 (ENSCPBG00000009393) #12	ENSCPBG00000009416	ENSCPBG00000009421
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.k #22
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000029099	UBXN1 (ENSLLEG00000029109)	TESMIN (ENSLLEG00000029142)	ENSLLEG00000029172	ENSLLEG00000029178	GAL (ENSLLEG00000029187)	LRP5 (ENSLLEG00000029281)	ENSLLEG00000029606	ENSLLEG00000029615	KMT5B (ENSLLEG00000029633)	CHKA (ENSLLEG00000029689)	ENSLLEG00000029724	ENSLLEG00000008324 ##22	ENSLLEG00000008358	ENSLLEG00000008466	ENSLLEG00000008673 #22	ENSLLEG00000008723	ENSLLEG00000008794 #22	FOSL1 (ENSLLEG00000008852)	CCDC85B (ENSLLEG00000008892)	FIBP (ENSLLEG00000008926)	EFEMP2 (ENSLLEG00000009106)	MUS81 (ENSLLEG00000009192)	ENSLLEG00000009532	DSTN (ENSLLEG00000009564)	ENSLLEG00000009601	OVOL1 (ENSLLEG00000009629)	ENSLLEG00000009763	ENSLLEG00000009817	ENSLLEG00000010148	ENSLLEG00000010256
Leishan spiny toad	MODERN SPECIES	1	TESMIN (ENSLLEG00000029142)	ENSLLEG00000029172	ENSLLEG00000029178	GAL (ENSLLEG00000029187)	LRP5 (ENSLLEG00000029281)	ENSLLEG00000029606	ENSLLEG00000029615	KMT5B (ENSLLEG00000029633)	CHKA (ENSLLEG00000029689)	ENSLLEG00000029724	ENSLLEG00000008324 ##22	ENSLLEG00000008358	ENSLLEG00000008466	ENSLLEG00000008673 #22	ENSLLEG00000008723	ENSLLEG00000008794 #22	FOSL1 (ENSLLEG00000008852)	CCDC85B (ENSLLEG00000008892)	FIBP (ENSLLEG00000008926)	EFEMP2 (ENSLLEG00000009106)	MUS81 (ENSLLEG00000009192)	ENSLLEG00000009532	DSTN (ENSLLEG00000009564)	ENSLLEG00000009601	OVOL1 (ENSLLEG00000009629)	ENSLLEG00000009763	ENSLLEG00000009817	ENSLLEG00000010148	ENSLLEG00000010256	DPP3 (ENSLLEG00000010849)	ENSLLEG00000011271
Anura	DUPLICATION
Anura	DUPLICATION
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.l.a.a.a #22
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000019496	CITED2 (ENSLLEG00000019541)	TXLNB (ENSLLEG00000019563)	HECA (ENSLLEG00000019651)	ABRACL (ENSLLEG00000019780)	ENSLLEG00000019965	ECT2L (ENSLLEG00000021904)	ENSLLEG00000022674	CCDC28A (ENSLLEG00000022703)	NHSL1 (ENSLLEG00000022810)	ENSLLEG00000023286	ARFGEF3 (ENSLLEG00000023530)	ENSLLEG00000025334	PERP (ENSLLEG00000025370)	TNFAIP3 (ENSLLEG00000025403)	ENSLLEG00000025469 #22	ENSLLEG00000025600	ENSLLEG00000025618	OLIG3 (ENSLLEG00000025632)	ENSLLEG00000025653	ENSLLEG00000025754	ENSLLEG00000025771	ENSLLEG00000025779	ENSLLEG00000025827	ENSLLEG00000026040	SLC35D3 (ENSLLEG00000026167)	ENSLLEG00000026200	PEX7 (ENSLLEG00000026217)	ENSLLEG00000026340	ENSLLEG00000026365	MAP3K5 (ENSLLEG00000026418)
Frog	MODERN SPECIES	7	ENSXETG00000042593	ENSXETG00000042768	ENSXETG00000049080	ENSXETG00000043326	ENSXETG00000042439	ENSXETG00000048695	ENSXETG00000044259	ENSXETG00000045451	ENSXETG00000033759	ENSXETG00000032650	ENSXETG00000042152	nxpe2 (ENSXETG00000033821) #22	ENSXETG00000045762	ENSXETG00000034991	ENSXETG00000045260	ENSXETG00000031143 #22	ENSXETG00000012642 #22	nxpe4 (ENSXETG00000032558) #22	rbm7 (ENSXETG00000012648) #19	ENSXETG00000012655	XB5789557 [provisional] (ENSXETG00000012652) #16	spa17 (ENSXETG00000028009)	vsig2 (ENSXETG00000012656)	esam (ENSXETG00000032940)	msantd2 (ENSXETG00000031548)	robo3 (ENSXETG00000003938)	robo4 (ENSXETG00000041019)	hepacam (ENSXETG00000003936)	ccdc15 (ENSXETG00000033081)	slc37a2 (ENSXETG00000003934)	XB990243 [provisional] (ENSXETG00000003933)
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.l.a.a.b #22
Frog	MODERN SPECIES	7	ENSXETG00000042768	ENSXETG00000049080	ENSXETG00000043326	ENSXETG00000042439	ENSXETG00000048695	ENSXETG00000044259	ENSXETG00000045451	ENSXETG00000033759	ENSXETG00000032650	ENSXETG00000042152	nxpe2 (ENSXETG00000033821) #22	ENSXETG00000045762	ENSXETG00000034991	ENSXETG00000045260	ENSXETG00000031143 #22	ENSXETG00000012642 #22	nxpe4 (ENSXETG00000032558) #22	rbm7 (ENSXETG00000012648) #19	ENSXETG00000012655	XB5789557 [provisional] (ENSXETG00000012652) #16	spa17 (ENSXETG00000028009)	vsig2 (ENSXETG00000012656)	esam (ENSXETG00000032940)	msantd2 (ENSXETG00000031548)	robo3 (ENSXETG00000003938)	robo4 (ENSXETG00000041019)	hepacam (ENSXETG00000003936)	ccdc15 (ENSXETG00000033081)	slc37a2 (ENSXETG00000003934)	XB990243 [provisional] (ENSXETG00000003933)	pknox2 (ENSXETG00000017781)
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000029478	PPP1R12C (ENSLLEG00000029435)	TNNT1 (ENSLLEG00000029305)	TNNI3 (ENSLLEG00000029264)	DNAAF3 (ENSLLEG00000029231)	SYT5 (ENSLLEG00000029186)	TMC4 (ENSLLEG00000029144)	MBOAT7 (ENSLLEG00000029110)	ENSLLEG00000029089	RPS9 (ENSLLEG00000028999)	ENSLLEG00000028929	ENSLLEG00000028907	ENSLLEG00000028874	ENSLLEG00000028851	ENSLLEG00000028837	ENSLLEG00000028800 #22	ENSLLEG00000028691	GYS1 (ENSLLEG00000028607)	ENSLLEG00000028575	ENSLLEG00000028396	ENSLLEG00000028339	ENSLLEG00000028279	ENSLLEG00000028259	NUCB1 (ENSLLEG00000028199)	ENSLLEG00000028148	ENSLLEG00000028093	ENSLLEG00000028060	ENSLLEG00000027796	ENSLLEG00000027764	ENSLLEG00000027747	ENSLLEG00000027499
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.l.a.b #22
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000022383	ENSLLEG00000022724	CDC14A (ENSLLEG00000022772)	RTCA (ENSLLEG00000023179)	DBT (ENSLLEG00000023274)	ENSLLEG00000023368	LRRC39 (ENSLLEG00000023427)	TRMT13 (ENSLLEG00000023520)	ENSLLEG00000023677	MFSD14A (ENSLLEG00000023851)	SLC35A3 (ENSLLEG00000024185)	ENSLLEG00000024360	ENSLLEG00000024394	ENSLLEG00000024676 #22	ENSLLEG00000024794 #22	ENSLLEG00000024873 #22	ENSLLEG00000025028 #22	ENSLLEG00000025286	ENSLLEG00000025316 #22	ENSLLEG00000025575	ENSLLEG00000025601 #22	LGALS1 (ENSLLEG00000025679)	SH3BP1 (ENSLLEG00000025727)	ENSLLEG00000025829	LGALS2 (ENSLLEG00000025979)	ENSLLEG00000026089	ELFN2 (ENSLLEG00000026126)	CYTH4 (ENSLLEG00000026146)	ENSLLEG00000026221	ENSLLEG00000026238	ENSLLEG00000026286
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000022724	CDC14A (ENSLLEG00000022772)	RTCA (ENSLLEG00000023179)	DBT (ENSLLEG00000023274)	ENSLLEG00000023368	LRRC39 (ENSLLEG00000023427)	TRMT13 (ENSLLEG00000023520)	ENSLLEG00000023677	MFSD14A (ENSLLEG00000023851)	SLC35A3 (ENSLLEG00000024185)	ENSLLEG00000024360	ENSLLEG00000024394	ENSLLEG00000024676 #22	ENSLLEG00000024794 #22	ENSLLEG00000024873 #22	ENSLLEG00000025028 #22	ENSLLEG00000025286	ENSLLEG00000025316 #22	ENSLLEG00000025575	ENSLLEG00000025601 #22	LGALS1 (ENSLLEG00000025679)	SH3BP1 (ENSLLEG00000025727)	ENSLLEG00000025829	LGALS2 (ENSLLEG00000025979)	ENSLLEG00000026089	ELFN2 (ENSLLEG00000026126)	CYTH4 (ENSLLEG00000026146)	ENSLLEG00000026221	ENSLLEG00000026238	ENSLLEG00000026286	ENSLLEG00000026314
Anura	DUPLICATION
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES	602																ENSGT00950000182866.D.c.l.b.a.a #22	ENSGT00390000009255 #19
Leishan spiny toad	MODERN SPECIES	2	HINFP (ENSLLEG00000014041)	C2CD2L (ENSLLEG00000014333)	DPAGT1 (ENSLLEG00000014528)	HMBS (ENSLLEG00000014650)	ENSLLEG00000014851	ENSLLEG00000014868	ENSLLEG00000014915	ENSLLEG00000015141	IFT46 (ENSLLEG00000015276)	ARCN1 (ENSLLEG00000015604)	ENSLLEG00000015909	ENSLLEG00000015926	TECTA (ENSLLEG00000015971)	ENSLLEG00000016759	TBCEL (ENSLLEG00000016855)	ENSLLEG00000016957 #22	ENSLLEG00000017014	ENSLLEG00000017048	ENSLLEG00000017073	ENSLLEG00000017136	ENSLLEG00000017193	ENSLLEG00000017226 #18	ENSLLEG00000017313	ENSLLEG00000017342	ENSLLEG00000017394	ENSLLEG00000018098	ENSLLEG00000018116	ENSLLEG00000018163	ENSLLEG00000018537	ENSLLEG00000018572	ENSLLEG00000018598
Frog	MODERN SPECIES	7	ENSXETG00000049080	ENSXETG00000043326	ENSXETG00000042439	ENSXETG00000048695	ENSXETG00000044259	ENSXETG00000045451	ENSXETG00000033759	ENSXETG00000032650	ENSXETG00000042152	nxpe2 (ENSXETG00000033821) #22	ENSXETG00000045762	ENSXETG00000034991	ENSXETG00000045260	ENSXETG00000031143 #22	ENSXETG00000012642 #22	nxpe4 (ENSXETG00000032558) #22	rbm7 (ENSXETG00000012648) #19	ENSXETG00000012655	XB5789557 [provisional] (ENSXETG00000012652) #16	spa17 (ENSXETG00000028009)	vsig2 (ENSXETG00000012656)	esam (ENSXETG00000032940)	msantd2 (ENSXETG00000031548)	robo3 (ENSXETG00000003938)	robo4 (ENSXETG00000041019)	hepacam (ENSXETG00000003936)	ccdc15 (ENSXETG00000033081)	slc37a2 (ENSXETG00000003934)	XB990243 [provisional] (ENSXETG00000003933)	pknox2 (ENSXETG00000017781)	fez1 (ENSXETG00000017780)
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.l.b.a.b #22
Frog	MODERN SPECIES	7	ENSXETG00000045840	ENSXETG00000047684	ENSXETG00000048937	ENSXETG00000042752	ENSXETG00000042593	ENSXETG00000042768	ENSXETG00000049080	ENSXETG00000043326	ENSXETG00000042439	ENSXETG00000048695	ENSXETG00000044259	ENSXETG00000045451	ENSXETG00000033759	ENSXETG00000032650	ENSXETG00000042152	nxpe2 (ENSXETG00000033821) #22	ENSXETG00000045762	ENSXETG00000034991	ENSXETG00000045260	ENSXETG00000031143 #22	ENSXETG00000012642 #22	nxpe4 (ENSXETG00000032558) #22	rbm7 (ENSXETG00000012648) #19	ENSXETG00000012655	XB5789557 [provisional] (ENSXETG00000012652) #16	spa17 (ENSXETG00000028009)	vsig2 (ENSXETG00000012656)	esam (ENSXETG00000032940)	msantd2 (ENSXETG00000031548)	robo3 (ENSXETG00000003938)	robo4 (ENSXETG00000041019)
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c.l.b.b #22
Frog	DUPLICATION
Frog	DUPLICATION
Frog	MODERN SPECIES	7	ENSXETG00000046704	ENSXETG00000041449	ENSXETG00000041557	ENSXETG00000048567	ENSXETG00000042769	ENSXETG00000047024	ENSXETG00000044080	ENSXETG00000042837	ENSXETG00000048347	ENSXETG00000043870	ENSXETG00000047468	ENSXETG00000044888	ENSXETG00000027949	ENSXETG00000043996	ENSXETG00000047786	ENSXETG00000003928 #22	nxpe1 (ENSXETG00000039695) #22	ENSXETG00000041589	rpl27a (ENSXETG00000003912)	fam118b (ENSXETG00000003924)	srpra (ENSXETG00000003920)	foxred1 (ENSXETG00000000843)	tub (ENSXETG00000003913)	ubash3b (ENSXETG00000003900)	ENSXETG00000038464	XB5896631 [provisional] (ENSXETG00000030114)	ENSXETG00000045557	ENSXETG00000049396	crtam (ENSXETG00000003896)	ENSXETG00000046608	bsx (ENSXETG00000016950)
Frog	MODERN SPECIES	7	cnfn.3 (ENSXETG00000012044)	cnfn.1 (ENSXETG00000026058)	cnfn.2 (ENSXETG00000032177)	ENSXETG00000037499	lipe (ENSXETG00000012042)	ENSXETG00000044330	ENSXETG00000045122	ENSXETG00000046739	ENSXETG00000047761	ENSXETG00000041430	ENSXETG00000045717	ceacam8l (ENSXETG00000032631)	ceacam8 (ENSXETG00000020831)	ENSXETG00000037393	ceacam19lm (ENSXETG00000035406)	ENSXETG00000038034 #22	ENSXETG00000019334	ENSXETG00000038536	ENSXETG00000032229	ceacam19ly (ENSXETG00000047572)	ENSXETG00000039129	bcl3 (ENSXETG00000045778)	bcam (ENSXETG00000019324)	nectin2 (ENSXETG00000024874)	tomm40 (ENSXETG00000019319)	apoe (ENSXETG00000035511) ##29	apoc1 (ENSXETG00000040719)	ENSXETG00000038278	ENSXETG00000041975	prss1.2 (ENSXETG00000041324)	ENSXETG00000040768
Frog	MODERN SPECIES	7	ENSXETG00000041449	ENSXETG00000041557	ENSXETG00000048567	ENSXETG00000042769	ENSXETG00000047024	ENSXETG00000044080	ENSXETG00000042837	ENSXETG00000048347	ENSXETG00000043870	ENSXETG00000047468	ENSXETG00000044888	ENSXETG00000027949	ENSXETG00000043996	ENSXETG00000047786	ENSXETG00000003928 #22	nxpe1 (ENSXETG00000039695) #22	ENSXETG00000041589	rpl27a (ENSXETG00000003912)	fam118b (ENSXETG00000003924)	srpra (ENSXETG00000003920)	foxred1 (ENSXETG00000000843)	tub (ENSXETG00000003913)	ubash3b (ENSXETG00000003900)	ENSXETG00000038464	XB5896631 [provisional] (ENSXETG00000030114)	ENSXETG00000045557	ENSXETG00000049396	crtam (ENSXETG00000003896)	ENSXETG00000046608	bsx (ENSXETG00000016950)	sc5d (ENSXETG00000040073)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	11	RTCA (ENSLLEG00000023179)	DBT (ENSLLEG00000023274)	ENSLLEG00000023368	LRRC39 (ENSLLEG00000023427)	TRMT13 (ENSLLEG00000023520)	ENSLLEG00000023677	MFSD14A (ENSLLEG00000023851)	SLC35A3 (ENSLLEG00000024185)	ENSLLEG00000024360	ENSLLEG00000024394	ENSLLEG00000024676 #22	ENSLLEG00000024794 #22	ENSLLEG00000024873 #22	ENSLLEG00000025028 #22	ENSLLEG00000025286	ENSLLEG00000025316 #22	ENSLLEG00000025575	ENSLLEG00000025601 #22	LGALS1 (ENSLLEG00000025679)	SH3BP1 (ENSLLEG00000025727)	ENSLLEG00000025829	LGALS2 (ENSLLEG00000025979)	ENSLLEG00000026089	ELFN2 (ENSLLEG00000026126)	CYTH4 (ENSLLEG00000026146)	ENSLLEG00000026221	ENSLLEG00000026238	ENSLLEG00000026286	ENSLLEG00000026314	SSTR3 (ENSLLEG00000026345)	ENSLLEG00000026354
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000023368	LRRC39 (ENSLLEG00000023427)	TRMT13 (ENSLLEG00000023520)	ENSLLEG00000023677	MFSD14A (ENSLLEG00000023851)	SLC35A3 (ENSLLEG00000024185)	ENSLLEG00000024360	ENSLLEG00000024394	ENSLLEG00000024676 #22	ENSLLEG00000024794 #22	ENSLLEG00000024873 #22	ENSLLEG00000025028 #22	ENSLLEG00000025286	ENSLLEG00000025316 #22	ENSLLEG00000025575	ENSLLEG00000025601 #22	LGALS1 (ENSLLEG00000025679)	SH3BP1 (ENSLLEG00000025727)	ENSLLEG00000025829	LGALS2 (ENSLLEG00000025979)	ENSLLEG00000026089	ELFN2 (ENSLLEG00000026126)	CYTH4 (ENSLLEG00000026146)	ENSLLEG00000026221	ENSLLEG00000026238	ENSLLEG00000026286	ENSLLEG00000026314	SSTR3 (ENSLLEG00000026345)	ENSLLEG00000026354	ENSLLEG00000026374	TMPRSS6 (ENSLLEG00000026470)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000026238	ENSLLEG00000026221	CYTH4 (ENSLLEG00000026146)	ELFN2 (ENSLLEG00000026126)	ENSLLEG00000026089	LGALS2 (ENSLLEG00000025979)	ENSLLEG00000025829	SH3BP1 (ENSLLEG00000025727)	LGALS1 (ENSLLEG00000025679)	ENSLLEG00000025601 #22	ENSLLEG00000025575	ENSLLEG00000025316 #22	ENSLLEG00000025286	ENSLLEG00000025028 #22	ENSLLEG00000024873 #22	ENSLLEG00000024794 #22	ENSLLEG00000024676 #22	ENSLLEG00000024394	ENSLLEG00000024360	SLC35A3 (ENSLLEG00000024185)	MFSD14A (ENSLLEG00000023851)	ENSLLEG00000023677	TRMT13 (ENSLLEG00000023520)	LRRC39 (ENSLLEG00000023427)	ENSLLEG00000023368	DBT (ENSLLEG00000023274)	RTCA (ENSLLEG00000023179)	CDC14A (ENSLLEG00000022772)	ENSLLEG00000022724	ENSLLEG00000022383	EXTL2 (ENSLLEG00000022307)
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000026221	CYTH4 (ENSLLEG00000026146)	ELFN2 (ENSLLEG00000026126)	ENSLLEG00000026089	LGALS2 (ENSLLEG00000025979)	ENSLLEG00000025829	SH3BP1 (ENSLLEG00000025727)	LGALS1 (ENSLLEG00000025679)	ENSLLEG00000025601 #22	ENSLLEG00000025575	ENSLLEG00000025316 #22	ENSLLEG00000025286	ENSLLEG00000025028 #22	ENSLLEG00000024873 #22	ENSLLEG00000024794 #22	ENSLLEG00000024676 #22	ENSLLEG00000024394	ENSLLEG00000024360	SLC35A3 (ENSLLEG00000024185)	MFSD14A (ENSLLEG00000023851)	ENSLLEG00000023677	TRMT13 (ENSLLEG00000023520)	LRRC39 (ENSLLEG00000023427)	ENSLLEG00000023368	DBT (ENSLLEG00000023274)	RTCA (ENSLLEG00000023179)	CDC14A (ENSLLEG00000022772)	ENSLLEG00000022724	ENSLLEG00000022383	EXTL2 (ENSLLEG00000022307)	SLC30A7 (ENSLLEG00000022081)
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	2	ENSECRG00000015725	bcat2 (ENSECRG00000015785)	ENSECRG00000016058	ENSECRG00000020669	ENSECRG00000020680	kcnc3a (ENSECRG00000020718)	ENSECRG00000020831	rps11 (ENSECRG00000020848)	lin7b (ENSECRG00000020880)	PPFIA3 (ENSECRG00000020920)	ENSECRG00000021011	ENSECRG00000021087	NTF4 (ENSECRG00000021095)	ENSECRG00000021113	snrnp70 (ENSECRG00000021135)	ENSECRG00000021156 #22	tbc1d25 (ENSECRG00000021177)	porcnl (ENSECRG00000021214)	ENSECRG00000021250	ENSECRG00000021270	ENSECRG00000021288	ENSECRG00000021296	slc17a7a (ENSECRG00000021336)	ENSECRG00000021417	ENSECRG00000021493	ENSECRG00000021505	ENSECRG00000021525	slc6a16b (ENSECRG00000021556)	ENSECRG00000021599	capzb (ENSECRG00000021618)	ENSECRG00000021639
Reedfish	MODERN SPECIES	2	ENSECRG00000010344	ENSECRG00000010337	ENSECRG00000010294	ENSECRG00000010268	ENSECRG00000010256	ENSECRG00000010245	ENSECRG00000010145	IRF3 (ENSECRG00000010094)	ENSECRG00000010069	ENSECRG00000010057	rras (ENSECRG00000010043)	ENSECRG00000010035	pnkp (ENSECRG00000009996)	ENSECRG00000009953	wdr13 (ENSECRG00000009926)	ENSECRG00000009906 #22	ENSECRG00000009885	trpm4a (ENSECRG00000009857)	ENSECRG00000009844	ENSECRG00000009832	DUSP9 (ENSECRG00000009818)	ccnq (ENSECRG00000009809)	ENSECRG00000009799	bgna (ENSECRG00000009777)	si:dkey-6n6.1 (ENSECRG00000009758)	tnnc1b (ENSECRG00000009751)	ENSECRG00000009741	ENSECRG00000009734	ENSECRG00000009722	UBE2M (ENSECRG00000009706)	chmp2a (ENSECRG00000009694)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Osteoglossiformes	ANCESTRAL SPECIES	550													ENSGT00940000163530.i	ENSGT00940000155182.a	ENSGT00530000063811.B.b.e	ENSGT00950000182866.D.c #22
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	856																ENSPKIG00000024632 #22	ENSPKIG00000024638 #22
P. kingsleyae	MODERN SPECIES	9																ENSPKIG00000023843 #22	ENSPKIG00000023832 #22	ENSPKIG00000023746	ddx55 (ENSPKIG00000023661)	TMED2 (ENSPKIG00000023639)	ptpn11a (ENSPKIG00000023620)	RPH3A (ENSPKIG00000023577)	pla2g3 (ENSPKIG00000023555)	TTC28 (ENSPKIG00000023480)	pitpnb (ENSPKIG00000023432)	MN1 (ENSPKIG00000023418)	NAA25 (ENSPKIG00000023372)	PLPPR1 (ENSPKIG00000023329)	GRIN3A (ENSPKIG00000023292)	ENSPKIG00000023272	ENSPKIG00000023258
P. kingsleyae	MODERN SPECIES	2	ENSPKIG00000023554	tescb (ENSPKIG00000023600)	CABP7 (ENSPKIG00000023655)	zmat5 (ENSPKIG00000023667)	uqcr10 (ENSPKIG00000023679)	PRODH (ENSPKIG00000023708)	rtn4r (ENSPKIG00000023748)	ENSPKIG00000023754	GAL3ST1 (ENSPKIG00000023769)	srsf9 (ENSPKIG00000023787)	triap1 (ENSPKIG00000023808)	ENSPKIG00000023817	FAM222A (ENSPKIG00000023838)	ENSPKIG00000023853 #22	ENSPKIG00000023862 #22	ENSPKIG00000023871 #22	ENSPKIG00000023898	USP6 (ENSPKIG00000023934)	ENSPKIG00000000473	appbp2 (ENSPKIG00000000485)	ppm1da (ENSPKIG00000000512)	bcas3 (ENSPKIG00000000537)	tbx2b (ENSPKIG00000000566)	tbx4 (ENSPKIG00000000606)	brip1 (ENSPKIG00000000690)	aatf (ENSPKIG00000000808)	lhx1a (ENSPKIG00000000837)	dhrs13a.3 (ENSPKIG00000000851)	dhrs13l1 (ENSPKIG00000000865)	PHF12 (ENSPKIG00000000881)	SEZ6 (ENSPKIG00000000994)
P. kingsleyae	MODERN SPECIES	2	HSPB8 (ENSPKIG00000023530)	ENSPKIG00000023541	ENSPKIG00000023554	tescb (ENSPKIG00000023600)	CABP7 (ENSPKIG00000023655)	zmat5 (ENSPKIG00000023667)	uqcr10 (ENSPKIG00000023679)	PRODH (ENSPKIG00000023708)	rtn4r (ENSPKIG00000023748)	ENSPKIG00000023754	GAL3ST1 (ENSPKIG00000023769)	srsf9 (ENSPKIG00000023787)	triap1 (ENSPKIG00000023808)	ENSPKIG00000023817	FAM222A (ENSPKIG00000023838)	ENSPKIG00000023853 #22	ENSPKIG00000023862 #22	ENSPKIG00000023871 #22	ENSPKIG00000023898	USP6 (ENSPKIG00000023934)	ENSPKIG00000000473	appbp2 (ENSPKIG00000000485)	ppm1da (ENSPKIG00000000512)	bcas3 (ENSPKIG00000000537)	tbx2b (ENSPKIG00000000566)	tbx4 (ENSPKIG00000000606)	brip1 (ENSPKIG00000000690)	aatf (ENSPKIG00000000808)	lhx1a (ENSPKIG00000000837)	dhrs13a.3 (ENSPKIG00000000851)	dhrs13l1 (ENSPKIG00000000865)
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	2	ENSPKIG00000023541	ENSPKIG00000023554	tescb (ENSPKIG00000023600)	CABP7 (ENSPKIG00000023655)	zmat5 (ENSPKIG00000023667)	uqcr10 (ENSPKIG00000023679)	PRODH (ENSPKIG00000023708)	rtn4r (ENSPKIG00000023748)	ENSPKIG00000023754	GAL3ST1 (ENSPKIG00000023769)	srsf9 (ENSPKIG00000023787)	triap1 (ENSPKIG00000023808)	ENSPKIG00000023817	FAM222A (ENSPKIG00000023838)	ENSPKIG00000023853 #22	ENSPKIG00000023862 #22	ENSPKIG00000023871 #22	ENSPKIG00000023898	USP6 (ENSPKIG00000023934)	ENSPKIG00000000473	appbp2 (ENSPKIG00000000485)	ppm1da (ENSPKIG00000000512)	bcas3 (ENSPKIG00000000537)	tbx2b (ENSPKIG00000000566)	tbx4 (ENSPKIG00000000606)	brip1 (ENSPKIG00000000690)	aatf (ENSPKIG00000000808)	lhx1a (ENSPKIG00000000837)	dhrs13a.3 (ENSPKIG00000000851)	dhrs13l1 (ENSPKIG00000000865)	PHF12 (ENSPKIG00000000881)
P. kingsleyae	MODERN SPECIES	856															ENSPKIG00000024632 #22	ENSPKIG00000024638 #22
P. kingsleyae	MODERN SPECIES	9															ENSPKIG00000023843 #22	ENSPKIG00000023832 #22	ENSPKIG00000023746	ddx55 (ENSPKIG00000023661)	TMED2 (ENSPKIG00000023639)	ptpn11a (ENSPKIG00000023620)	RPH3A (ENSPKIG00000023577)	pla2g3 (ENSPKIG00000023555)	TTC28 (ENSPKIG00000023480)	pitpnb (ENSPKIG00000023432)	MN1 (ENSPKIG00000023418)	NAA25 (ENSPKIG00000023372)	PLPPR1 (ENSPKIG00000023329)	GRIN3A (ENSPKIG00000023292)	ENSPKIG00000023272	ENSPKIG00000023258	lpar1 (ENSPKIG00000023252)
Asian bonytongue	MODERN SPECIES	21	HSPB8 (ENSSFOG00015029913)	ENSSFOG00015031951	TAOK3 (ENSSFOG00015017178)	m17 (ENSSFOG00015026889)	tescb (ENSSFOG00015017213)	CABP7 (ENSSFOG00015026455)	zmat5 (ENSSFOG00015017242)	uqcr10 (ENSSFOG00015017253)	PRODH (ENSSFOG00015017267)	rtn4r (ENSSFOG00015028817)	GAL3ST1 (ENSSFOG00015027770)	srsf9 (ENSSFOG00015017303)	triap1 (ENSSFOG00015026510)	ENSSFOG00015032195	FAM222A (ENSSFOG00015025412)	NXPE4 (ENSSFOG00015017365) #22	ENSSFOG00015017407	ddx55 (ENSSFOG00015017496)	tmed2 (ENSSFOG00015017552)	ptpn11a (ENSSFOG00015017592)	RPH3A (ENSSFOG00015017626)	pla2g3 (ENSSFOG00015017643)	TTC28 (ENSSFOG00015017661)	pitpnb (ENSSFOG00015017744)	MN1 (ENSSFOG00015017775)	NAA25 (ENSSFOG00015017785)	PLPPR1 (ENSSFOG00015017856)	GRIN3A (ENSSFOG00015017869)	ENSSFOG00015017889	lpar1 (ENSSFOG00015017919)	MUSK (ENSSFOG00015017924)
Elephant shark	MODERN SPECIES	2436																ENSCMIG00000006856 #22	nxpe3 (ENSCMIG00000006858) ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.c #22
Lamprey	DUPLICATION
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	225					PAFAH2 (ENSPMAG00000003076)	zc4h2 (ENSPMAG00000003067)	ENSPMAG00000003062	ENSPMAG00000003053	ENSPMAG00000003040	ENSPMAG00000003028	ENSPMAG00000003019	SSNA1 (ENSPMAG00000003017)	naa50 (ENSPMAG00000003009)	ENSPMAG00000002988	ENSPMAG00000002969	ENSPMAG00000002967 #22
Lamprey	MODERN SPECIES	2114																ENSPMAG00000005577 #22
Lamprey	DUPLICATION
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	1765														ENSPMAG00000009482	fntb (ENSPMAG00000009479)	ENSPMAG00000009477 #22	ENSPMAG00000009476
Lamprey	MODERN SPECIES	5449																ENSPMAG00000004451 #22
Lamprey	MODERN SPECIES	3231																ENSPMAG00000005345 #22	ENSPMAG00000005323
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a ##22
Gnathostomata	ANCESTRAL SPECIES	23	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000005596	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000164443	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	2436															ENSCMIG00000006856 #22	nxpe3 (ENSCMIG00000006858) ##22
Elephant shark	MODERN SPECIES	1527	ENSCMIG00000019534	tfg (ENSCMIG00000019535)	ENSCMIG00000019537	ENSCMIG00000019556	ENSCMIG00000019563	ENSCMIG00000019565	txnl4b (ENSCMIG00000019568)	trmt10c (ENSCMIG00000019570)	pcnp (ENSCMIG00000019573)	ZBTB11 (ENSCMIG00000019580)	rpl24 (ENSCMIG00000019587)	CEP97 (ENSCMIG00000019592)	nxpe3 (ENSCMIG00000019593) ##22	ENSCMIG00000019594	nxpe3 (ENSCMIG00000019595) ##22	ENSCMIG00000019596 ##22	nxpe3 (ENSCMIG00000019597) ##22	nxpe3 (ENSCMIG00000019598) ##22	nxpe3 (ENSCMIG00000019600) ##22	NFKBIZ (ENSCMIG00000019601)	ZPLD1 (ENSCMIG00000019604)	ENSCMIG00000019605	ENSCMIG00000019608	ENSCMIG00000019624	CBLB (ENSCMIG00000019631)	BBX (ENSCMIG00000019639)	ENSCMIG00000019641	ENSCMIG00000019643	ENSCMIG00000019644	ENSCMIG00000019646	ENSCMIG00000019647
Elephant shark	MODERN SPECIES	1527	tfg (ENSCMIG00000019535)	ENSCMIG00000019537	ENSCMIG00000019556	ENSCMIG00000019563	ENSCMIG00000019565	txnl4b (ENSCMIG00000019568)	trmt10c (ENSCMIG00000019570)	pcnp (ENSCMIG00000019573)	ZBTB11 (ENSCMIG00000019580)	rpl24 (ENSCMIG00000019587)	CEP97 (ENSCMIG00000019592)	nxpe3 (ENSCMIG00000019593) ##22	ENSCMIG00000019594	nxpe3 (ENSCMIG00000019595) ##22	ENSCMIG00000019596 ##22	nxpe3 (ENSCMIG00000019597) ##22	nxpe3 (ENSCMIG00000019598) ##22	nxpe3 (ENSCMIG00000019600) ##22	NFKBIZ (ENSCMIG00000019601)	ZPLD1 (ENSCMIG00000019604)	ENSCMIG00000019605	ENSCMIG00000019608	ENSCMIG00000019624	CBLB (ENSCMIG00000019631)	BBX (ENSCMIG00000019639)	ENSCMIG00000019641	ENSCMIG00000019643	ENSCMIG00000019644	ENSCMIG00000019646	ENSCMIG00000019647	ENSCMIG00000019652
Elephant shark	MODERN SPECIES	1527	ENSCMIG00000019530	jagn1b (ENSCMIG00000019532)	ENSCMIG00000019533	ENSCMIG00000019534	tfg (ENSCMIG00000019535)	ENSCMIG00000019537	ENSCMIG00000019556	ENSCMIG00000019563	ENSCMIG00000019565	txnl4b (ENSCMIG00000019568)	trmt10c (ENSCMIG00000019570)	pcnp (ENSCMIG00000019573)	ZBTB11 (ENSCMIG00000019580)	rpl24 (ENSCMIG00000019587)	CEP97 (ENSCMIG00000019592)	nxpe3 (ENSCMIG00000019593) ##22	ENSCMIG00000019594	nxpe3 (ENSCMIG00000019595) ##22	ENSCMIG00000019596 ##22	nxpe3 (ENSCMIG00000019597) ##22	nxpe3 (ENSCMIG00000019598) ##22	nxpe3 (ENSCMIG00000019600) ##22	NFKBIZ (ENSCMIG00000019601)	ZPLD1 (ENSCMIG00000019604)	ENSCMIG00000019605	ENSCMIG00000019608	ENSCMIG00000019624	CBLB (ENSCMIG00000019631)	BBX (ENSCMIG00000019639)	ENSCMIG00000019641	ENSCMIG00000019643
Elephant shark	DUPLICATION
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1527	ENSCMIG00000019533	ENSCMIG00000019534	tfg (ENSCMIG00000019535)	ENSCMIG00000019537	ENSCMIG00000019556	ENSCMIG00000019563	ENSCMIG00000019565	txnl4b (ENSCMIG00000019568)	trmt10c (ENSCMIG00000019570)	pcnp (ENSCMIG00000019573)	ZBTB11 (ENSCMIG00000019580)	rpl24 (ENSCMIG00000019587)	CEP97 (ENSCMIG00000019592)	nxpe3 (ENSCMIG00000019593) ##22	ENSCMIG00000019594	nxpe3 (ENSCMIG00000019595) ##22	ENSCMIG00000019596 ##22	nxpe3 (ENSCMIG00000019597) ##22	nxpe3 (ENSCMIG00000019598) ##22	nxpe3 (ENSCMIG00000019600) ##22	NFKBIZ (ENSCMIG00000019601)	ZPLD1 (ENSCMIG00000019604)	ENSCMIG00000019605	ENSCMIG00000019608	ENSCMIG00000019624	CBLB (ENSCMIG00000019631)	BBX (ENSCMIG00000019639)	ENSCMIG00000019641	ENSCMIG00000019643	ENSCMIG00000019644	ENSCMIG00000019646
Elephant shark	MODERN SPECIES	1527	ENSCMIG00000019556	ENSCMIG00000019563	ENSCMIG00000019565	txnl4b (ENSCMIG00000019568)	trmt10c (ENSCMIG00000019570)	pcnp (ENSCMIG00000019573)	ZBTB11 (ENSCMIG00000019580)	rpl24 (ENSCMIG00000019587)	CEP97 (ENSCMIG00000019592)	nxpe3 (ENSCMIG00000019593) ##22	ENSCMIG00000019594	nxpe3 (ENSCMIG00000019595) ##22	ENSCMIG00000019596 ##22	nxpe3 (ENSCMIG00000019597) ##22	nxpe3 (ENSCMIG00000019598) ##22	nxpe3 (ENSCMIG00000019600) ##22	NFKBIZ (ENSCMIG00000019601)	ZPLD1 (ENSCMIG00000019604)	ENSCMIG00000019605	ENSCMIG00000019608	ENSCMIG00000019624	CBLB (ENSCMIG00000019631)	BBX (ENSCMIG00000019639)	ENSCMIG00000019641	ENSCMIG00000019643	ENSCMIG00000019644	ENSCMIG00000019646	ENSCMIG00000019647	ENSCMIG00000019652	ENSCMIG00000019658	cip2a (ENSCMIG00000019661)
Elephant shark	MODERN SPECIES	1527	ENSCMIG00000019537	ENSCMIG00000019556	ENSCMIG00000019563	ENSCMIG00000019565	txnl4b (ENSCMIG00000019568)	trmt10c (ENSCMIG00000019570)	pcnp (ENSCMIG00000019573)	ZBTB11 (ENSCMIG00000019580)	rpl24 (ENSCMIG00000019587)	CEP97 (ENSCMIG00000019592)	nxpe3 (ENSCMIG00000019593) ##22	ENSCMIG00000019594	nxpe3 (ENSCMIG00000019595) ##22	ENSCMIG00000019596 ##22	nxpe3 (ENSCMIG00000019597) ##22	nxpe3 (ENSCMIG00000019598) ##22	nxpe3 (ENSCMIG00000019600) ##22	NFKBIZ (ENSCMIG00000019601)	ZPLD1 (ENSCMIG00000019604)	ENSCMIG00000019605	ENSCMIG00000019608	ENSCMIG00000019624	CBLB (ENSCMIG00000019631)	BBX (ENSCMIG00000019639)	ENSCMIG00000019641	ENSCMIG00000019643	ENSCMIG00000019644	ENSCMIG00000019646	ENSCMIG00000019647	ENSCMIG00000019652	ENSCMIG00000019658
Euteleostomi	DUPLICATION
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a ##22
Clupeocephala	ANCESTRAL SPECIES	58			ENSGT00530000063252.a.b.a.b	ENSGT00940000155799	ENSGT00940000165208.b	ENSGT00940000166048.a.a	ENSGT00940000156596.d	ENSGT00940000154652.p	ENSGT00940000157453.s	ENSGT00940000154927.c.b	ENSGT00950000182899.B.a.j	ENSGT00940000157231.b	ENSGT00950000183058.A.a.c	ENSGT00950000183058.A.b.a	ENSGT00950000183134.c.a.a	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00510000047120.fb	ENSGT00950000182900.C	ENSGT00940000157829	ENSGT00940000158556	ENSGT00950000182827.A	ENSGT00940000164470.a	ENSGT00520000055625.a	ENSGT00940000155202	ENSGT00940000154517.mb	ENSGT00530000063528.B	ENSGT00940000166292	ENSGT00940000166446	ENSGT00990000203619.A.a	ENSGT01030000234518.C.b	ENSGT01060000248589.C.g.a
Otomorpha	ANCESTRAL SPECIES	93	ENSGT01060000248589.C.g.a	ENSGT01030000234518.C.b	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.m.b	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000157231.b	ENSGT00940000179735	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000155799	ENSGT00530000063252.a.b.a.b	ENSGT00720000109997
Clupeiformes	ANCESTRAL SPECIES	24	ENSGT01060000248589.C.g.a	ENSGT01030000234518.C.b	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.n	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00390000011985	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000157231.b	ENSGT00390000010316	ENSGT00530000064199.d	ENSGT00950000182997.a.b.b.a	ENSGT01100000263521.b	ENSGT01100000263534.b.i
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000027236	mao (ENSCHAG00000027304)	ENSCHAG00000027503	efhc2 (ENSCHAG00000000120)	fundc1 (ENSCHAG00000000198)	KDM6A (ENSCHAG00000002100)	DIPK2B (ENSCHAG00000022620)	ccdc80 (ENSCHAG00000022629)	slc35a5 (ENSCHAG00000022633)	f5 (ENSCHAG00000022668)	gpr161b (ENSCHAG00000022945)	dcaf6 (ENSCHAG00000022971)	mpc2b (ENSCHAG00000023115)	nxpe3 (ENSCHAG00000023120) ##22	nxpe3 (ENSCHAG00000023142) ##22	nxpe3 (ENSCHAG00000023147) ##22	ENSCHAG00000023160	ENSCHAG00000023163	me3 (ENSCHAG00000023202)	ormdl1 (ENSCHAG00000024916)	adat3 (ENSCHAG00000024919)	osgepl1 (ENSCHAG00000024924)	ankar (ENSCHAG00000024933)	ENSCHAG00000024938	ENSCHAG00000024941	UBXN4 (ENSCHAG00000024962)	ENSCHAG00000025134	ENSCHAG00000025156	ENSCHAG00000025164	rnd3b (ENSCHAG00000025173)	rnd3b (ENSCHAG00000025177)
Atlantic herring	MODERN SPECIES	11	gpr34b (ENSCHAG00000027230)	GPR82 (ENSCHAG00000027234)	ENSCHAG00000027236	mao (ENSCHAG00000027304)	ENSCHAG00000027503	efhc2 (ENSCHAG00000000120)	fundc1 (ENSCHAG00000000198)	KDM6A (ENSCHAG00000002100)	DIPK2B (ENSCHAG00000022620)	ccdc80 (ENSCHAG00000022629)	slc35a5 (ENSCHAG00000022633)	f5 (ENSCHAG00000022668)	gpr161b (ENSCHAG00000022945)	dcaf6 (ENSCHAG00000022971)	mpc2b (ENSCHAG00000023115)	nxpe3 (ENSCHAG00000023120) ##22	nxpe3 (ENSCHAG00000023142) ##22	nxpe3 (ENSCHAG00000023147) ##22	ENSCHAG00000023160	ENSCHAG00000023163	me3 (ENSCHAG00000023202)	ormdl1 (ENSCHAG00000024916)	adat3 (ENSCHAG00000024919)	osgepl1 (ENSCHAG00000024924)	ankar (ENSCHAG00000024933)	ENSCHAG00000024938	ENSCHAG00000024941	UBXN4 (ENSCHAG00000024962)	ENSCHAG00000025134	ENSCHAG00000025156	ENSCHAG00000025164
Atlantic herring	MODERN SPECIES	24	SPRY3 (ENSCHAG00000004945)	slc25a14 (ENSCHAG00000004903)	GPR119 (ENSCHAG00000004876)	slc25a14 (ENSCHAG00000004763)	GPR119 (ENSCHAG00000004744)	siah2l (ENSCHAG00000004661)	zgc:153990 (ENSCHAG00000004647)	capns1a (ENSCHAG00000004534)	alkbh6 (ENSCHAG00000004509)	nova1 (ENSCHAG00000004382)	micu2 (ENSCHAG00000004346)	ENSCHAG00000004295	DRP2 (ENSCHAG00000004082)	ENSCHAG00000004066	cmklr1 (ENSCHAG00000004026)	nxpe3 (ENSCHAG00000003697) ##22	cmklr1 (ENSCHAG00000003664)	ENSCHAG00000003650	ENSCHAG00000003635	ENSCHAG00000003609	glra4b (ENSCHAG00000003537)	aifm1 (ENSCHAG00000002327)	npas2 (ENSCHAG00000002166)	ENSCHAG00000002127	ENSCHAG00000002115	plrdgb (ENSCHAG00000001965)	ENSCHAG00000001927	tmigd1 (ENSCHAG00000001911)	slc47a1 (ENSCHAG00000001782)	slc47a2.1 (ENSCHAG00000001304)	MED31 (ENSCHAG00000001214)
Atlantic herring	MODERN SPECIES	11	GPR82 (ENSCHAG00000027234)	ENSCHAG00000027236	mao (ENSCHAG00000027304)	ENSCHAG00000027503	efhc2 (ENSCHAG00000000120)	fundc1 (ENSCHAG00000000198)	KDM6A (ENSCHAG00000002100)	DIPK2B (ENSCHAG00000022620)	ccdc80 (ENSCHAG00000022629)	slc35a5 (ENSCHAG00000022633)	f5 (ENSCHAG00000022668)	gpr161b (ENSCHAG00000022945)	dcaf6 (ENSCHAG00000022971)	mpc2b (ENSCHAG00000023115)	nxpe3 (ENSCHAG00000023120) ##22	nxpe3 (ENSCHAG00000023142) ##22	nxpe3 (ENSCHAG00000023147) ##22	ENSCHAG00000023160	ENSCHAG00000023163	me3 (ENSCHAG00000023202)	ormdl1 (ENSCHAG00000024916)	adat3 (ENSCHAG00000024919)	osgepl1 (ENSCHAG00000024924)	ankar (ENSCHAG00000024933)	ENSCHAG00000024938	ENSCHAG00000024941	UBXN4 (ENSCHAG00000024962)	ENSCHAG00000025134	ENSCHAG00000025156	ENSCHAG00000025164	rnd3b (ENSCHAG00000025173)
Denticle herring	MODERN SPECIES	19	THSD7B (ENSDCDG00000035026)	SPOPL (ENSDCDG00000035055)	NXPH2 (ENSDCDG00000035060)	ENSDCDG00000035061	ugt1a2 (ENSDCDG00000035065)	ENSDCDG00000035068	prmt2 (ENSDCDG00000035071)	ENSDCDG00000035073	DIP2A (ENSDCDG00000035163)	ENSDCDG00000035389	ndufb3 (ENSDCDG00000035390)	gpa33a (ENSDCDG00000035391)	ildr2 (ENSDCDG00000035392)	ildr1b (ENSDCDG00000035395)	me3 (ENSDCDG00000035407)	nxpe3 (ENSDCDG00000035487) ##22	hnmt (ENSDCDG00000035489)	mpc2b (ENSDCDG00000035493)	dcaf6 (ENSDCDG00000035505)	GPR161 (ENSDCDG00000035530)	f5 (ENSDCDG00000035541)	slc35a5 (ENSDCDG00000035579)	ccdc80 (ENSDCDG00000014043)	DIPK2B (ENSDCDG00000014055)	KDM6A (ENSDCDG00000015322)	fundc1 (ENSDCDG00000032900)	efhc2 (ENSDCDG00000032907)	ENSDCDG00000032914	mao (ENSDCDG00000032955)	caska (ENSDCDG00000033445)	GPR82 (ENSDCDG00000033472)
Otophysi	ANCESTRAL SPECIES	45	ENSGT01060000248589.C.g.a	ENSGT01030000234518.C.b	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.m.b	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00940000174992	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000179735	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b
Characiphysae	ANCESTRAL SPECIES	3	ENSGT01060000248589.C.g.a	ENSGT01030000234518.C.b	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.m.b	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000179735	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00390000018369	ENSGT00940000158486	ENSGT00940000158108	ENSGT00940000156711.k.a	ENSGT00390000001134.a.a	ENSGT01100000263536.C	ENSGT01030000234518.C.a.b.a.b.a	ENSGT00950000184597
Characiphysae_b	ANCESTRAL SPECIES	60	ENSGT01060000248589.C.g.a	ENSGT01030000234518.C.b	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.m.b	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000179735	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00390000018369	ENSGT00940000158486	ENSGT00940000158108	ENSGT00940000156711.k.a	ENSGT00390000001134.a.a	ENSGT01100000263536.C	ENSGT01030000234518.C.a.b.a.b.a	ENSGT00950000184597
Characoidei	ANCESTRAL SPECIES	1	ENSGT01060000248589.C.g.a	ENSGT01030000234518.C.b	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.m.b	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000179735	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00390000018369	ENSGT00940000158486	ENSGT00940000158108	ENSGT00940000156711.k.a	ENSGT00390000001134.a.a	ENSGT01100000263536.C	ENSGT01030000234518.C.a.b.a.b.a	ENSGT00950000184597
Red-bellied piranha	MODERN SPECIES	37	GPR82 (ENSPNAG00000022378)	ENSPNAG00000022395	caska (ENSPNAG00000022583)	mao (ENSPNAG00000003726)	ENSPNAG00000022680	efhc2 (ENSPNAG00000022726)	fundc1 (ENSPNAG00000022745)	KDM6A (ENSPNAG00000023014)	DIPK2B (ENSPNAG00000023041)	ccdc80 (ENSPNAG00000023076)	slc35a5 (ENSPNAG00000023082)	f5 (ENSPNAG00000023096)	gpr161b (ENSPNAG00000023100)	dcaf6 (ENSPNAG00000023168)	mpc2b (ENSPNAG00000023184)	nxpe3 (ENSPNAG00000023204) ##22	me3 (ENSPNAG00000023243)	ildr1b (ENSPNAG00000023255)	ildr2 (ENSPNAG00000023280)	ENSPNAG00000023290	pou2f1b (ENSPNAG00000023329)	ENSPNAG00000023341	lamp1b (ENSPNAG00000023347)	grtp1b (ENSPNAG00000023379)	ENSPNAG00000023393	TBC1D4 (ENSPNAG00000023496)	klf12b (ENSPNAG00000023514)	KLF5 (ENSPNAG00000023524)	dachd (ENSPNAG00000023569)	GPR18 (ENSPNAG00000023582)	gpr183a (ENSPNAG00000023592)
Mexicana tetra	MODERN SPECIES	10	ENSAMXG00000002566	GPR82 (ENSAMXG00000026071)	mao (ENSAMXG00000034369)	ENSAMXG00000038349	efhc2 (ENSAMXG00000002504)	fundc1 (ENSAMXG00000033791)	KDM6A (ENSAMXG00000002456)	DIPK2B (ENSAMXG00000013458)	ENSAMXG00000032865	ENSAMXG00000032377	slc35a5 (ENSAMXG00000012443)	f5 (ENSAMXG00000012372)	gpr161b (ENSAMXG00000002416)	dcaf6 (ENSAMXG00000002412)	mpc2b (ENSAMXG00000032767)	nxpe3 (ENSAMXG00000038717) ##22	me3 (ENSAMXG00000002394)	ildr1b (ENSAMXG00000042828)	ildr2 (ENSAMXG00000002386)	ENSAMXG00000002379	ENSAMXG00000037121	pou2f1b (ENSAMXG00000002371)	ENSAMXG00000040590	lamp1b (ENSAMXG00000038307)	grtp1b (ENSAMXG00000035177)	ENSAMXG00000037854	TBC1D4 (ENSAMXG00000002349)	klf12b (ENSAMXG00000002340)	KLF5 (ENSAMXG00000002337)	dachd (ENSAMXG00000042864)	GPR18 (ENSAMXG00000026070)
Electric eel	MODERN SPECIES	87	caska (ENSEEEG00000007668)	mao (ENSEEEG00000007647)	ENSEEEG00000007645	efhc2 (ENSEEEG00000007641)	fundc1 (ENSEEEG00000007638)	KDM6A (ENSEEEG00000005528)	DIPK2B (ENSEEEG00000005391)	ENSEEEG00000005390	ENSEEEG00000005389	ccdc80 (ENSEEEG00000005388)	slc35a5 (ENSEEEG00000005387)	f5 (ENSEEEG00000005385)	gpr161b (ENSEEEG00000005383)	dcaf6 (ENSEEEG00000005382)	mpc2b (ENSEEEG00000005381)	nxpe3 (ENSEEEG00000005379) ##22	ME3 (ENSEEEG00000005167)	ildr1b (ENSEEEG00000005135)	ildr2 (ENSEEEG00000005134)	ENSEEEG00000005132	ENSEEEG00000005131	pou2f1b (ENSEEEG00000005130)	ENSEEEG00000005129	lamp1b (ENSEEEG00000005128)	TBC1D4 (ENSEEEG00000005072)	klf12b (ENSEEEG00000005058)	KLF5 (ENSEEEG00000005056)	dachd (ENSEEEG00000005050)	GPR18 (ENSEEEG00000005049)	gpr183a (ENSEEEG00000005048)	ENSEEEG00000005047
Channel catfish	DUPLICATION
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	25	hao2 (ENSIPUG00000003534)	wars2 (ENSIPUG00000003502)	tbx15 (ENSIPUG00000003465)	wdr3 (ENSIPUG00000003396)	gdap2 (ENSIPUG00000003321)	fam46c (ENSIPUG00000003310)	MAN1A2 (ENSIPUG00000003278)	trim45 (ENSIPUG00000003261)	vtcn1 (ENSIPUG00000003252)	ENSIPUG00000003181	ttf2 (ENSIPUG00000003123)	igsf3 (ENSIPUG00000003105)	igsf3l (ENSIPUG00000003079)	ptgfrn (ENSIPUG00000003065)	nxpe3 (ENSIPUG00000003030) ##22	nxpe3 (ENSIPUG00000002999) ##22	umps (ENSIPUG00000002984)	si:dkey-69o16.5 (ENSIPUG00000002964)	itgav (ENSIPUG00000002925)	zc3h15 (ENSIPUG00000002902)	ENSIPUG00000002872	znf804a (ENSIPUG00000002869)	nup35 (ENSIPUG00000002798)	ehhadh (ENSIPUG00000002778)	tmem41aa (ENSIPUG00000002751)	tra2b (ENSIPUG00000002730)	TSPEAR (ENSIPUG00000002692)	ENSIPUG00000002685	ENSIPUG00000002677	ENSIPUG00000002627	glb1l (ENSIPUG00000002614)
Channel catfish	MODERN SPECIES	25	Klhl13 (ENSIPUG00000003553)	hao2 (ENSIPUG00000003534)	wars2 (ENSIPUG00000003502)	tbx15 (ENSIPUG00000003465)	wdr3 (ENSIPUG00000003396)	gdap2 (ENSIPUG00000003321)	fam46c (ENSIPUG00000003310)	MAN1A2 (ENSIPUG00000003278)	trim45 (ENSIPUG00000003261)	vtcn1 (ENSIPUG00000003252)	ENSIPUG00000003181	ttf2 (ENSIPUG00000003123)	igsf3 (ENSIPUG00000003105)	igsf3l (ENSIPUG00000003079)	ptgfrn (ENSIPUG00000003065)	nxpe3 (ENSIPUG00000003030) ##22	nxpe3 (ENSIPUG00000002999) ##22	umps (ENSIPUG00000002984)	si:dkey-69o16.5 (ENSIPUG00000002964)	itgav (ENSIPUG00000002925)	zc3h15 (ENSIPUG00000002902)	ENSIPUG00000002872	znf804a (ENSIPUG00000002869)	nup35 (ENSIPUG00000002798)	ehhadh (ENSIPUG00000002778)	tmem41aa (ENSIPUG00000002751)	tra2b (ENSIPUG00000002730)	TSPEAR (ENSIPUG00000002692)	ENSIPUG00000002685	ENSIPUG00000002677	ENSIPUG00000002627
Channel catfish	MODERN SPECIES	25	gpr82 (ENSIPUG00000023015)	ENSIPUG00000023013	caska (ENSIPUG00000023002)	mao (ENSIPUG00000022984)	NDP (ENSIPUG00000022977)	efhc2 (ENSIPUG00000022962)	fundc1 (ENSIPUG00000022959)	kdm6a (ENSIPUG00000022913)	c6hxorf36 (ENSIPUG00000022904)	ccdc80 (ENSIPUG00000022899)	slc35a5 (ENSIPUG00000022894)	f5 (ENSIPUG00000022871)	gpr161 (ENSIPUG00000022864)	dcaf6 (ENSIPUG00000022819)	mpc2b (ENSIPUG00000022793)	nxpe3 (ENSIPUG00000022789) ##22	myo1b (ENSIPUG00000022662)	C3orf38 (ENSIPUG00000022645)	epha3 (ENSIPUG00000022585)	STX19 (ENSIPUG00000022572)	rsph1 (ENSIPUG00000022543)	cln5 (ENSIPUG00000022537)	ENSIPUG00000022520	mycbp2 (ENSIPUG00000022438)	slain1 (ENSIPUG00000022414)	ENSIPUG00000022410	KBTBD7 (ENSIPUG00000022406)	ENSIPUG00000022402	zgc:101559 (ENSIPUG00000022394)	rgcc (ENSIPUG00000022380)	vwa8 (ENSIPUG00000022344)
Cyprinoidei	ANCESTRAL SPECIES	80	ENSGT00940000155600.b	ENSGT01060000248589.C.g.a	ENSGT00990000203619.A.a	ENSGT00940000166446	ENSGT00940000166292	ENSGT00530000063528.B	ENSGT00940000154517.mb	ENSGT00940000155202	ENSGT00520000055625.a	ENSGT00940000164470.a	ENSGT00950000182827.A	ENSGT00940000158556	ENSGT00940000157829.m.b	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00940000174992	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831.m	ENSGT00390000003894	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00390000001021	ENSGT00610000087455	ENSGT00950000182972.a.a.a.a.b	ENSGT00940000163491	ENSGT00940000154287.a	ENSGT00940000178781
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	16	ENSGT00940000154287.a.k	ENSGT00940000163491.o	ENSGT00950000182972.a.a.a.a.b.m	ENSGT00390000001021.v	ENSGT00940000154927.c.b.b	ENSGT00950000182899.B.a.j.g	ENSGT00940000157831.m.a	ENSGT00940000160248.a	ENSGT00950000183058.A.a.c.a	ENSGT00950000183058.A.b.a	ENSGT00950000183134.c.a.a.u.a	ENSGT00950000182866.D.d.a.c.a.f ##22	ENSGT00510000047120.fb.b	ENSGT00950000182900.C.w.a	ENSGT00950000183134.c.a.a.u.b	ENSGT00950000182866.D.d.a.c.a.e ##22	ENSGT00510000047120.fb.a	ENSGT00950000182900.C.w.b	ENSGT00940000157829.m.b	ENSGT00940000158556.a	ENSGT00950000182827.A.b	ENSGT00940000164470.a.a	ENSGT00520000055625.a.h	ENSGT00940000155202.c	ENSGT00940000154517.mb.b.b.b	ENSGT00940000158556.b	ENSGT00950000182827.A.a	ENSGT00940000164470.a.b	ENSGT00520000055625.a.g	ENSGT00940000155202.d	ENSGT00940000154517.mb.b.b.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	49	asmtl (ENSCARG00000003733)	slc25a6 (ENSCARG00000003741)	ENSCARG00000003749	shox (ENSCARG00000003760)	ENSCARG00000003903	ENSCARG00000004855	med14 (ENSCARG00000004944)	grtp1b (ENSCARG00000005128)	lamp1b (ENSCARG00000005143)	ENSCARG00000005152	pou2f1b (ENSCARG00000005173)	ildr2 (ENSCARG00000005187)	ildr1b (ENSCARG00000005194)	me3 (ENSCARG00000005256)	ENSCARG00000006244	nxpe3 (ENSCARG00000006256) ##22	ENSCARG00000006271	ENSCARG00000006280	mpc2b (ENSCARG00000006309)	dcaf6 (ENSCARG00000006410)	gpr161b (ENSCARG00000007093)	f5 (ENSCARG00000007197)	slc35a5 (ENSCARG00000008041)	ccdc80 (ENSCARG00000008046)	ENSCARG00000008063	ENSCARG00000008151	fundc1 (ENSCARG00000008372)	efhc2 (ENSCARG00000008384)	ENSCARG00000008418	mao (ENSCARG00000008519)	nyx (ENSCARG00000011064)
Goldfish	MODERN SPECIES	49	HECW2 (ENSCARG00000029264)	ENSCARG00000029312	maip1 (ENSCARG00000029326)	tyw5 (ENSCARG00000029338)	ENSCARG00000049201	ENSCARG00000049327	ENSCARG00000049576	ackr3a (ENSCARG00000049588)	rpe (ENSCARG00000049623)	prlh (ENSCARG00000049651)	ENSCARG00000049654	ENSCARG00000049680	ildr2 (ENSCARG00000049706)	ildr1b (ENSCARG00000049730)	me3 (ENSCARG00000049791)	nxpe3 (ENSCARG00000050158) ##22	mpc2b (ENSCARG00000050187)	mpc2b (ENSCARG00000050221)	pikfyve (ENSCARG00000050378)	ANKRD44 (ENSCARG00000051778)	SF3B1 (ENSCARG00000052330)	coq10b (ENSCARG00000052416)	hspd1 (ENSCARG00000052496)	hspe1 (ENSCARG00000052635)	mob4 (ENSCARG00000052649)	rftn2 (ENSCARG00000052689)	slc39a10 (ENSCARG00000052728)	DNAH7 (ENSCARG00000053145)	RUBCNL (ENSCARG00000059360)	LRCH1 (ENSCARG00000059394)	esd (ENSCARG00000059517)
Cyprininae_a	ANCESTRAL SPECIES	194	ENSGT00390000017146.b.o.a	ENSGT01050000244840.B.s	ENSGT00940000162413.b	ENSGT00940000162883.s.a	ENSGT00940000178781.a.b	ENSGT00940000154287.a.k	ENSGT00940000163491.o	ENSGT00950000182972.a.a.a.a.b.m	ENSGT00390000001021.v	ENSGT00940000154927.c.b.b	ENSGT00390000003894.b	ENSGT00940000157831.m.a	ENSGT00940000160248.a.a	ENSGT00950000183058.A.a.c.a	ENSGT00950000183134.c.a.a.u.b	ENSGT00950000182866.D.d.a.c.a.e ##22	ENSGT00510000047120.fb.a	ENSGT00950000182900.C.w.b	ENSGT00940000157829.m.b.b	ENSGT00940000158556.a	ENSGT00950000182827.A.b	ENSGT00940000164470.a.a	ENSGT00520000055625.a.h	ENSGT00940000155202.c	ENSGT00940000154517.mb.a	ENSGT00530000063528.B.j	ENSGT00940000166292.d	ENSGT00530000063528.B.i.a	ENSGT00940000166292.c.b	ENSGT00940000166446.a	ENSGT00990000203619.A.a.d
Common carp reference	MODERN SPECIES	46	cdc16 (ENSCCRG00000001739)	upf3a (ENSCCRG00000023877)	ENSCCRG00000064575	asmtl (ENSCCRG00000048581)	shox (ENSCCRG00000015484)	ENSCCRG00000010747	ENSCCRG00000011673	grtp1b (ENSCCRG00000014034)	med14 (ENSCCRG00000011704)	cd247l (ENSCCRG00000077825)	pou2f1b (ENSCCRG00000079797)	ENSCCRG00000014196	ildr2 (ENSCCRG00000049697)	me3 (ENSCCRG00000049694)	ENSCCRG00000076391	ENSCCRG00000049690 ##22	mpc2b (ENSCCRG00000039052)	dcaf6 (ENSCCRG00000047448)	gpr161b (ENSCCRG00000034608)	f5 (ENSCCRG00000046363)	slc35a5 (ENSCCRG00000046304)	ccdc80 (ENSCCRG00000076257)	fundc1 (ENSCCRG00000079209)	ENSCCRG00000036245	efhc2 (ENSCCRG00000032410)	ENSCCRG00000049386	mao (ENSCCRG00000010739)	GPR82 (ENSCCRG00000078751)	gpr34b (ENSCCRG00000078366)	caska (ENSCCRG00000062836)	nyx (ENSCCRG00000014039)
Golden-line barbel	MODERN SPECIES	232	asmtl (ENSSGRG00000041608)	slc25a6 (ENSSGRG00000041622)	ENSSGRG00000041656	shox (ENSSGRG00000041658)	ENSSGRG00000041659	ENSSGRG00000041660	med14 (ENSSGRG00000041679)	grtp1b (ENSSGRG00000042166)	cd247l (ENSSGRG00000042167)	pou2f1b (ENSSGRG00000042169)	ENSSGRG00000042172	ildr2 (ENSSGRG00000042173)	ENSSGRG00000042174	ENSSGRG00000042176	ENSSGRG00000042178	nxpe3 (ENSSGRG00000042180) ##22	mpc2b (ENSSGRG00000042182)	dcaf6 (ENSSGRG00000042186)	rps6kb1b (ENSSGRG00000042190)	SNX19 (ENSSGRG00000042476)	ENSSGRG00000042477	ADAMTS8 (ENSSGRG00000042509)	ENSSGRG00000042539	ENSSGRG00000042541	zgc:113279 (ENSSGRG00000042543)	ENSSGRG00000042544	ENSSGRG00000042545	PHLDB1 (ENSSGRG00000042551)	arcn1b (ENSSGRG00000042872)	ENSSGRG00000042997	pih1d2 (ENSSGRG00000042999)
Cyprininae	ANCESTRAL SPECIES	16	ENSGT01050000244840.B.s	ENSGT00940000162413.b	ENSGT00940000162883.s.a	ENSGT00940000178781.b	ENSGT00940000154287.a.k	ENSGT00940000163491.o	ENSGT00950000182972.a.a.a.a.b.m	ENSGT00390000001021.v	ENSGT00940000154927.c.b.b	ENSGT00950000182899.B.a.j.g	ENSGT00940000157831.m.a	ENSGT00940000160248.a	ENSGT00950000183058.A.a.c.a	ENSGT00950000183058.A.b.a	ENSGT00950000183134.c.a.a.u.a	ENSGT00950000182866.D.d.a.c.a.f ##22	ENSGT00510000047120.fb.b	ENSGT00950000182900.C.w.a	ENSGT00950000183134.c.a.a.u.b	ENSGT00950000182866.D.d.a.c.a.e ##22	ENSGT00510000047120.fb.a	ENSGT00950000182900.C.w.b	ENSGT00940000157829.m.b	ENSGT00940000158556.a	ENSGT00950000182827.A.b	ENSGT00940000164470.a.a	ENSGT00520000055625.a.h	ENSGT00940000155202.c	ENSGT00940000154517.mb.b.b.b	ENSGT00940000158556.b	ENSGT00950000182827.A.a
Goldfish	MODERN SPECIES	27	upf3a (ENSCARG00000045499)	P2RY8 (ENSCARG00000045632)	slc25a6 (ENSCARG00000045656)	ENSCARG00000045696	shox (ENSCARG00000045709)	ENSCARG00000045747	ENSCARG00000046052	med14 (ENSCARG00000046101)	grtp1b (ENSCARG00000046280)	lamp1b (ENSCARG00000046321)	cd247l (ENSCARG00000046350)	pou2f1b (ENSCARG00000046369)	ildr2 (ENSCARG00000046420)	ildr1b (ENSCARG00000046448)	me3 (ENSCARG00000046504)	nxpe3 (ENSCARG00000047007) ##22	mpc2b (ENSCARG00000047019)	dcaf6 (ENSCARG00000047048)	slc35a5 (ENSCARG00000047245)	ccdc80 (ENSCARG00000047281)	ENSCARG00000047291	DIPK2B (ENSCARG00000047301)	ENSCARG00000049200	fundc1 (ENSCARG00000069796)	ENSCARG00000069799	mao (ENSCARG00000069831)	caska (ENSCARG00000069874)	GPR82 (ENSCARG00000069952)	gpr34b (ENSCARG00000069956)	nyx (ENSCARG00000069959)	ddx3xa (ENSCARG00000070002)
Cyprininae_a	ANCESTRAL SPECIES	31	ENSGT00940000162413.a	ENSGT00940000162883.s.b	ENSGT00940000178781.a.a	ENSGT00940000154287.a.l	ENSGT00940000163491.p	ENSGT00950000182972.a.a.a.a.b.n	ENSGT00390000001021.u	ENSGT00940000154927.c.b.a	ENSGT00950000182899.B.a.j.h	ENSGT00390000003894.a.a	ENSGT00940000157831.m.b	ENSGT00940000160248.a.b	ENSGT00950000183058.A.a.c.b	ENSGT00950000183058.A.b.a	ENSGT00950000183134.c.a.a.u.a	ENSGT00950000182866.D.d.a.c.a.f ##22	ENSGT00510000047120.fb.b	ENSGT00950000182900.C.w.a	ENSGT00940000157829.m.b.a	ENSGT00940000158556.b	ENSGT00950000182827.A.a	ENSGT00940000164470.a.b	ENSGT00520000055625.a.g	ENSGT00940000155202.d	ENSGT00940000154517.mb.b.b.a	ENSGT00530000063528.B.i.b	ENSGT00940000166292.c.a.a	ENSGT00940000166446.b	ENSGT00990000203619.A.a.c	ENSGT01060000248589.C.g.a.a	ENSGT00940000155600.b.d.b
Common carp reference	MODERN SPECIES	41	upf3a (ENSCCRG00000002317)	P2RY8 (ENSCCRG00000061575)	ENSCCRG00000069682	slc25a6 (ENSCCRG00000069361)	ENSCCRG00000065885	shox (ENSCCRG00000070115)	ENSCCRG00000058691	med14 (ENSCCRG00000014072)	grtp1b (ENSCCRG00000014170)	lamp1b (ENSCCRG00000014037)	cd247l (ENSCCRG00000062905)	pou2f1b (ENSCCRG00000072522)	ildr2 (ENSCCRG00000014048)	ildr1b (ENSCCRG00000001334)	me3 (ENSCCRG00000078866)	ENSCCRG00000079768 ##22	mpc2b (ENSCCRG00000055492)	dcaf6 (ENSCCRG00000034711)	gpr161b (ENSCCRG00000047380)	f5 (ENSCCRG00000034064)	ccdc80 (ENSCCRG00000053691)	slc35a5 (ENSCCRG00000074095)	DIPK2B (ENSCCRG00000040379)	ENSCCRG00000028899	fundc1 (ENSCCRG00000019290)	efhc2 (ENSCCRG00000019285)	ENSCCRG00000066670	mao (ENSCCRG00000052851)	GPR82 (ENSCCRG00000064640)	caska (ENSCCRG00000074376)	nyx (ENSCCRG00000014064)
Golden-line barbel	MODERN SPECIES	208	P2RY8 (ENSSGRG00000034143)	asmtl (ENSSGRG00000034144)	slc25a6 (ENSSGRG00000034168)	ENSSGRG00000034312	shox (ENSSGRG00000034313)	ENSSGRG00000034315	ENSSGRG00000034468	med14 (ENSSGRG00000034494)	ENSSGRG00000035134	lamp1b (ENSSGRG00000035135)	cd247l (ENSSGRG00000035137)	pou2f1b (ENSSGRG00000035138)	ENSSGRG00000035140	ENSSGRG00000035141	me3 (ENSSGRG00000035150)	nxpe3 (ENSSGRG00000035548) ##22	mpc2b (ENSSGRG00000035553)	dcaf6 (ENSSGRG00000035674)	gpr161b (ENSSGRG00000035675)	slc35a5 (ENSSGRG00000035682)	ENSSGRG00000035686	ccdc80 (ENSSGRG00000035687)	DIPK2B (ENSSGRG00000035689)	ENSSGRG00000035879	fundc1 (ENSSGRG00000047056)	ENSSGRG00000047059	mao (ENSSGRG00000047065)	caska (ENSSGRG00000047146)	GPR82 (ENSSGRG00000047982)	gpr34b (ENSSGRG00000047983)	ddx3xa (ENSSGRG00000048009)
Zebrafish	MODERN SPECIES	24	gpr34b (ENSDARG00000002959)	ENSDARG00000093418	mao (ENSDARG00000023712)	ENSDARG00000076569	efhc2 (ENSDARG00000004204)	ENSDARG00000113245	fundc1 (ENSDARG00000040822)	KDM6A (ENSDARG00000061759)	DIPK2B (ENSDARG00000061747)	ccdc80 (ENSDARG00000000002)	slc35a5 (ENSDARG00000000001)	f5 (ENSDARG00000055705)	gpr161b (ENSDARG00000055659)	dcaf6 (ENSDARG00000078311)	mpc2b (ENSDARG00000024478)	nxpe3 (ENSDARG00000061690) ##22	me3 (ENSDARG00000002305)	ildr1b (ENSDARG00000040910)	ildr2 (ENSDARG00000014180)	ENSDARG00000040898	pou2f1b (ENSDARG00000007996)	cd247l (ENSDARG00000077240)	lamp1b (ENSDARG00000092610)	grtp1b (ENSDARG00000030269)	med14 (ENSDARG00000009953)	ENSDARG00000094660	ENSDARG00000074225	ENSDARG00000076004	shox (ENSDARG00000025891)	crlf2 (ENSDARG00000090632)	slc25a6 (ENSDARG00000005853)
Euteleosteomorpha	ANCESTRAL SPECIES	98											ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000157231.b	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157868
Acanthomorphata	DUPLICATION
Acanthomorphata	DUPLICATION
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.a ##22
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES	21	ENSGMOG00000028366	ENSGMOG00000031171	ENSGMOG00000025582	ENSGMOG00000028296	ENSGMOG00000001775	ENSGMOG00000022693	ENSGMOG00000035308	ENSGMOG00000033259	ENSGMOG00000024968	ENSGMOG00000017476	ENSGMOG00000037029	ENSGMOG00000027079	cldn15la (ENSGMOG00000004670)	saga (ENSGMOG00000004645)	ENSGMOG00000020058	ENSGMOG00000033167 ##22	proca (ENSGMOG00000004620)	ENSGMOG00000030949	ENSGMOG00000018411	sft2d3 (ENSGMOG00000029057)	ENSGMOG00000025734	ENSGMOG00000032974	ENSGMOG00000025753	ENSGMOG00000035257	ENSGMOG00000034386	ENSGMOG00000002097	EXOSC4 (ENSGMOG00000002113)	ENSGMOG00000002125	ENSGMOG00000015205	ENSGMOG00000002222	ENSGMOG00000030482
Cod	MODERN SPECIES		ENSGMOG00000006335	kif3b (ENSGMOG00000018429)	pofut1 (ENSGMOG00000018410)	plagl2 (ENSGMOG00000031773)	tm9sf4 (ENSGMOG00000018361)	HCK (ENSGMOG00000018342)	ENSGMOG00000027544	gata5 (ENSGMOG00000003817)	SLCO4A1 (ENSGMOG00000007021)	ENSGMOG00000031098	ENSGMOG00000003091	fkbp1ab (ENSGMOG00000003078)	ENSGMOG00000025840	ENSGMOG00000031239	ENSGMOG00000026865	ENSGMOG00000019137 ##22	ENSGMOG00000037158	ENSGMOG00000026088	ENSGMOG00000022950	ENSGMOG00000028698	ENSGMOG00000035691	ENSGMOG00000025852	ENSGMOG00000024809	ENSGMOG00000034363	ENSGMOG00000030978	ENSGMOG00000026670	ENSGMOG00000025455	ENSGMOG00000003386	ENSGMOG00000029022	ENSGMOG00000030253	c1galt1la (ENSGMOG00000001538)
Cod	MODERN SPECIES	14	ptpn2b (ENSGMOG00000002289)	ENSGMOG00000002266	ENSGMOG00000002245	ENSGMOG00000032234	stk3 (ENSGMOG00000002210)	RIDA (ENSGMOG00000002196)	rpl30 (ENSGMOG00000002186)	laptm4b (ENSGMOG00000028166)	rrm2b (ENSGMOG00000002116)	ENSGMOG00000002076	bloc1s4 (ENSGMOG00000002067)	pard6gb (ENSGMOG00000002054)	jarid2b (ENSGMOG00000015448)	dtnbp1b (ENSGMOG00000015437)	ENSGMOG00000004634 ##22	ENSGMOG00000026302 ##22	mylipa (ENSGMOG00000001473)	gmpr (ENSGMOG00000000402)	atxn1a (ENSGMOG00000029028)	ENSGMOG00000006959	fabp4a (ENSGMOG00000011938)	ENSGMOG00000011950	ENSGMOG00000011957	lypla2 (ENSGMOG00000011966)	pithd1 (ENSGMOG00000011971)	eloa (ENSGMOG00000011976)	ENSGMOG00000011985	rpl11 (ENSGMOG00000011990)	ENSGMOG00000012005	ENSGMOG00000012011	mycbp (ENSGMOG00000037243)
Cod	MODERN SPECIES	14	psmg2 (ENSGMOG00000002323)	ptpn2b (ENSGMOG00000002289)	ENSGMOG00000002266	ENSGMOG00000002245	ENSGMOG00000032234	stk3 (ENSGMOG00000002210)	RIDA (ENSGMOG00000002196)	rpl30 (ENSGMOG00000002186)	laptm4b (ENSGMOG00000028166)	rrm2b (ENSGMOG00000002116)	ENSGMOG00000002076	bloc1s4 (ENSGMOG00000002067)	pard6gb (ENSGMOG00000002054)	jarid2b (ENSGMOG00000015448)	dtnbp1b (ENSGMOG00000015437)	ENSGMOG00000004634 ##22	ENSGMOG00000026302 ##22	mylipa (ENSGMOG00000001473)	gmpr (ENSGMOG00000000402)	atxn1a (ENSGMOG00000029028)	ENSGMOG00000006959	fabp4a (ENSGMOG00000011938)	ENSGMOG00000011950	ENSGMOG00000011957	lypla2 (ENSGMOG00000011966)	pithd1 (ENSGMOG00000011971)	eloa (ENSGMOG00000011976)	ENSGMOG00000011985	rpl11 (ENSGMOG00000011990)	ENSGMOG00000012005	ENSGMOG00000012011
Cod	MODERN SPECIES	2	ENSGMOG00000018918	ENSGMOG00000005393	ENSGMOG00000002320	si:ch211-151o1.4 (ENSGMOG00000035727)	ENSGMOG00000035237	elovl4a (ENSGMOG00000002373)	ENSGMOG00000002471	ENSGMOG00000002517	ENSGMOG00000002660	ENSGMOG00000002787	ENSGMOG00000026115	ENSGMOG00000002804	ENSGMOG00000027675	rad21a (ENSGMOG00000003193)	eif3ha (ENSGMOG00000003373)	ENSGMOG00000028535 ##22	ENSGMOG00000028760	ENSGMOG00000032946	ENSGMOG00000025873	ENSGMOG00000003489	eomesb (ENSGMOG00000003675)	ENSGMOG00000022807	azi2 (ENSGMOG00000003761)	ENSGMOG00000029549	RBMS3 (ENSGMOG00000032451)	entpd3 (ENSGMOG00000003928)	ddc (ENSGMOG00000004282)	ddc (ENSGMOG00000036492)	ENSGMOG00000004480	cobl (ENSGMOG00000032107)	ENSGMOG00000004653
Cod	DUPLICATION
Cod	MODERN SPECIES	12	CHPF (ENSGMOG00000012737)	ENSGMOG00000012733	ENSGMOG00000012727	ENSGMOG00000013984	ENSGMOG00000013967	SYTL5 (ENSGMOG00000003889)	srpx (ENSGMOG00000003854)	ENSGMOG00000003765	OTC (ENSGMOG00000003743)	gpr161b (ENSGMOG00000003731)	ENSGMOG00000003651	mpc2b (ENSGMOG00000003638)	RPL24 (ENSGMOG00000003627)	ENSGMOG00000027269	ENSGMOG00000027391	nxpe3 (ENSGMOG00000022197) ##22	nxpe3 (ENSGMOG00000029131) ##22	me3 (ENSGMOG00000011631)	ildr1b (ENSGMOG00000037170)	ildr2 (ENSGMOG00000011612)	ENSGMOG00000011606	pou2f1b (ENSGMOG00000011587)	lamp1b (ENSGMOG00000027758)	grtp1b (ENSGMOG00000031351)	dcun1d2a (ENSGMOG00000005782)	tfdp1a (ENSGMOG00000027221)	ENSGMOG00000011550	mettl21cb (ENSGMOG00000027825)	jam2b (ENSGMOG00000003102)	ENSGMOG00000034190	tmtops2b (ENSGMOG00000017190)
Cod	MODERN SPECIES	12	ENSGMOG00000012733	ENSGMOG00000012727	ENSGMOG00000013984	ENSGMOG00000013967	SYTL5 (ENSGMOG00000003889)	srpx (ENSGMOG00000003854)	ENSGMOG00000003765	OTC (ENSGMOG00000003743)	gpr161b (ENSGMOG00000003731)	ENSGMOG00000003651	mpc2b (ENSGMOG00000003638)	RPL24 (ENSGMOG00000003627)	ENSGMOG00000027269	ENSGMOG00000027391	nxpe3 (ENSGMOG00000022197) ##22	nxpe3 (ENSGMOG00000029131) ##22	me3 (ENSGMOG00000011631)	ildr1b (ENSGMOG00000037170)	ildr2 (ENSGMOG00000011612)	ENSGMOG00000011606	pou2f1b (ENSGMOG00000011587)	lamp1b (ENSGMOG00000027758)	grtp1b (ENSGMOG00000031351)	dcun1d2a (ENSGMOG00000005782)	tfdp1a (ENSGMOG00000027221)	ENSGMOG00000011550	mettl21cb (ENSGMOG00000027825)	jam2b (ENSGMOG00000003102)	ENSGMOG00000034190	tmtops2b (ENSGMOG00000017190)	uxs1 (ENSGMOG00000017159)
Acanthomorphata	DUPLICATION
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.a ##22
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES	10	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724	ENSGMOG00000023218	ENSGMOG00000035382	ENSGMOG00000023543	ENSGMOG00000034994	ENSGMOG00000032236	ENSGMOG00000034052	tbc1d22a (ENSGMOG00000005057)
Cod	MODERN SPECIES	10	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724	ENSGMOG00000023218	ENSGMOG00000035382	ENSGMOG00000023543
Cod	MODERN SPECIES	10	ENSGMOG00000036265	ENSGMOG00000027118	ETNK1 (ENSGMOG00000005482)	ENSGMOG00000005449	ENSGMOG00000017160	ENSGMOG00000017146	ENSGMOG00000017116	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027
Cod	DUPLICATION
Cod	DUPLICATION
Cod	DUPLICATION
Cod	MODERN SPECIES	10	ENSGMOG00000017160	ENSGMOG00000017146	ENSGMOG00000017116	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724
Cod	MODERN SPECIES	10	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724	ENSGMOG00000023218	ENSGMOG00000035382	ENSGMOG00000023543	ENSGMOG00000034994	ENSGMOG00000032236
Cod	DUPLICATION
Cod	MODERN SPECIES	10	ENSGMOG00000005449	ENSGMOG00000017160	ENSGMOG00000017146	ENSGMOG00000017116	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647
Cod	MODERN SPECIES	10	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724	ENSGMOG00000023218	ENSGMOG00000035382	ENSGMOG00000023543	ENSGMOG00000034994	ENSGMOG00000032236	ENSGMOG00000034052	tbc1d22a (ENSGMOG00000005057)	TAFA5 (ENSGMOG00000033839)
Cod	MODERN SPECIES	10	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724	ENSGMOG00000023218	ENSGMOG00000035382	ENSGMOG00000023543	ENSGMOG00000034994
Cod	MODERN SPECIES	10	ETNK1 (ENSGMOG00000005482)	ENSGMOG00000005449	ENSGMOG00000017160	ENSGMOG00000017146	ENSGMOG00000017116	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886
Acanthomorphata	DUPLICATION
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Cod	MODERN SPECIES	10	ENSGMOG00000017116	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492	ENSGMOG00000024886	ENSGMOG00000022647	ENSGMOG00000031724	ENSGMOG00000023218	ENSGMOG00000035382
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Oryzias	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Oryzias_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.a ##22
Chinese medaka	MODERN SPECIES	1967																ENSOSIG00000002815 ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.g.b.b.b ##22
Cod	MODERN SPECIES	10	ENSGMOG00000027118	ETNK1 (ENSGMOG00000005482)	ENSGMOG00000005449	ENSGMOG00000017160	ENSGMOG00000017146	ENSGMOG00000017116	SLC2A13 (ENSGMOG00000017940)	ENSGMOG00000028113	ABCD2 (ENSGMOG00000017928)	ENSGMOG00000006891	CPNE8 (ENSGMOG00000003002)	alg10 (ENSGMOG00000029704)	tprkb (ENSGMOG00000001388)	ENSGMOG00000001338	ENSGMOG00000022866 ##22	ENSGMOG00000024402 ##22	ENSGMOG00000034508 ##22	ENSGMOG00000037036 ##22	ENSGMOG00000030744 ##22	trmu (ENSGMOG00000001323)	ENSGMOG00000027396 ##22	ENSGMOG00000033282 ##22	ENSGMOG00000023530 ##22	ENSGMOG00000003513 ##22	ENSGMOG00000032179	ENSGMOG00000023722 ##22	ENSGMOG00000027373 ##22	ENSGMOG00000001265	GRAMD4 (ENSGMOG00000007957)	ENSGMOG00000025027	ENSGMOG00000028492
Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Percomorphaceae	ANCESTRAL SPECIES	23	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	440	tfdp1a (ENSHCOG00000004113)	dcun1d2a (ENSHCOG00000004132)	lamp1b (ENSHCOG00000004146)	pou2f1b (ENSHCOG00000004173)	ENSHCOG00000004183	ildr2 (ENSHCOG00000004233)	ildr1b (ENSHCOG00000004243)	ENSHCOG00000004252	me3 (ENSHCOG00000004262)	nxpe3 (ENSHCOG00000004270) ##22	nxpe3 (ENSHCOG00000004287) ##22	mpc2b (ENSHCOG00000004294)	rpl24 (ENSHCOG00000004302)	ENSHCOG00000004306	ENSHCOG00000004309	nxpe3 (ENSHCOG00000004332) ##22	dcaf6 (ENSHCOG00000004359)	gpr161b (ENSHCOG00000004391)	OTC (ENSHCOG00000004411)	ENSHCOG00000004419	srpx (ENSHCOG00000004443)	SYTL5 (ENSHCOG00000004466)	ENSHCOG00000004476	DYNLT3 (ENSHCOG00000004485)	xk (ENSHCOG00000004492)
Tiger tail seahorse	MODERN SPECIES	440	xk (ENSHCOG00000004492)	DYNLT3 (ENSHCOG00000004485)	ENSHCOG00000004476	SYTL5 (ENSHCOG00000004466)	srpx (ENSHCOG00000004443)	ENSHCOG00000004419	OTC (ENSHCOG00000004411)	gpr161b (ENSHCOG00000004391)	dcaf6 (ENSHCOG00000004359)	nxpe3 (ENSHCOG00000004332) ##22	ENSHCOG00000004309	ENSHCOG00000004306	rpl24 (ENSHCOG00000004302)	mpc2b (ENSHCOG00000004294)	nxpe3 (ENSHCOG00000004287) ##22	nxpe3 (ENSHCOG00000004270) ##22	me3 (ENSHCOG00000004262)	ENSHCOG00000004252	ildr1b (ENSHCOG00000004243)	ildr2 (ENSHCOG00000004233)	ENSHCOG00000004183	pou2f1b (ENSHCOG00000004173)	lamp1b (ENSHCOG00000004146)	dcun1d2a (ENSHCOG00000004132)	tfdp1a (ENSHCOG00000004113)	grk1a (ENSHCOG00000004087)	mettl21cb (ENSHCOG00000004066)	jam2b (ENSHCOG00000004042)	st6gal2a (ENSHCOG00000004006)	tmtops2b (ENSHCOG00000003998)	uxs1 (ENSHCOG00000003990)
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	905																nxpe3 (ENSHCOG00000018561) ##22
Tiger tail seahorse	MODERN SPECIES	440		xk (ENSHCOG00000004492)	DYNLT3 (ENSHCOG00000004485)	ENSHCOG00000004476	SYTL5 (ENSHCOG00000004466)	srpx (ENSHCOG00000004443)	ENSHCOG00000004419	OTC (ENSHCOG00000004411)	gpr161b (ENSHCOG00000004391)	dcaf6 (ENSHCOG00000004359)	nxpe3 (ENSHCOG00000004332) ##22	ENSHCOG00000004309	ENSHCOG00000004306	rpl24 (ENSHCOG00000004302)	mpc2b (ENSHCOG00000004294)	nxpe3 (ENSHCOG00000004287) ##22	nxpe3 (ENSHCOG00000004270) ##22	me3 (ENSHCOG00000004262)	ENSHCOG00000004252	ildr1b (ENSHCOG00000004243)	ildr2 (ENSHCOG00000004233)	ENSHCOG00000004183	pou2f1b (ENSHCOG00000004173)	lamp1b (ENSHCOG00000004146)	dcun1d2a (ENSHCOG00000004132)	tfdp1a (ENSHCOG00000004113)	grk1a (ENSHCOG00000004087)	mettl21cb (ENSHCOG00000004066)	jam2b (ENSHCOG00000004042)	st6gal2a (ENSHCOG00000004006)	tmtops2b (ENSHCOG00000003998)
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	136	sirt3 (ENSHCOG00000006367)	psmd13 (ENSHCOG00000006339)	ENSHCOG00000006302	ZNF319 (ENSHCOG00000006286)	csnk2a2a (ENSHCOG00000006280)	MATCAP1 (ENSHCOG00000006239)	zgc:194679 (ENSHCOG00000006231)	ENSHCOG00000006226	ENSHCOG00000006213	GABARAPL2 (ENSHCOG00000006062)	ENSHCOG00000006007	ENSHCOG00000005994	rpl12 (ENSHCOG00000005990)	pole3 (ENSHCOG00000005972)	kmt5b (ENSHCOG00000005960)	nxpe3 (ENSHCOG00000005947) ##22	ccnb2 (ENSHCOG00000005943)	cd82a (ENSHCOG00000005923)	tspan18a (ENSHCOG00000005835)	HERC1 (ENSHCOG00000005794)	dapk2a (ENSHCOG00000005672)	ENSHCOG00000005661	rab11a (ENSHCOG00000005652)	ENSHCOG00000005631	ENSHCOG00000005626	dis3l (ENSHCOG00000000183)	tipin (ENSHCOG00000005560)	lctla (ENSHCOG00000005554)	crybgx (ENSHCOG00000005524)	cars1 (ENSHCOG00000005493)	pex16 (ENSHCOG00000005418)
Tiger tail seahorse	MODERN SPECIES	456	LRRC58 (ENSHCOG00000005255)	fstl1b (ENSHCOG00000000141)	ENSHCOG00000004744	gja8a (ENSHCOG00000004740)	gja5a (ENSHCOG00000004729)	acp6 (ENSHCOG00000004720)	bcl9 (ENSHCOG00000004712)	ENSHCOG00000004702	chaf1b (ENSHCOG00000004695)	ENSHCOG00000004657	DOP1B (ENSHCOG00000004648)	ENSHCOG00000004602	SLC5A3 (ENSHCOG00000004590)	casq2 (ENSHCOG00000004580)	vangl1 (ENSHCOG00000004550)	nxpe3 (ENSHCOG00000004522) ##22	ackr3a (ENSHCOG00000004447)	rpe (ENSHCOG00000004438)	igsf3 (ENSHCOG00000004403)	ENSHCOG00000004371	ENSHCOG00000004343	ENSHCOG00000004329	ANOS1 (ENSHCOG00000004314)	tbl1x (ENSHCOG00000004264)	GPR143 (ENSHCOG00000004237)	ENSHCOG00000004215	mospd2 (ENSHCOG00000004209)	ENSHCOG00000004192	glra2 (ENSHCOG00000004168)	gpm6bb (ENSHCOG00000004149)	ENSHCOG00000004133
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Pomacentridae	ANCESTRAL SPECIES	29	ENSGT00530000063252.a.b.a.b	ENSGT00390000014405	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000157053.u.b
Pomacentridae_A	ANCESTRAL SPECIES	29							ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000157053.u.b
Amphiprion	ANCESTRAL SPECIES	24						ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00390000014242.k.c	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000157053.u.b
Orange clownfish	MODERN SPECIES	3						ENSAPEG00000007982	srpx (ENSAPEG00000007930)	ENSAPEG00000007861	OTC (ENSAPEG00000007840)	gpr161b (ENSAPEG00000007822)	ENSAPEG00000007807	ENSAPEG00000007794	mpc2b (ENSAPEG00000007773)	rpl24 (ENSAPEG00000007741)	ENSAPEG00000007718	nxpe3 (ENSAPEG00000007710) ##22	me3 (ENSAPEG00000007656)	ildr1b (ENSAPEG00000007639)	ildr2 (ENSAPEG00000007611)	ENSAPEG00000007598	pou2f1b (ENSAPEG00000007532)	ENSAPEG00000007502	lamp1b (ENSAPEG00000007472)	grtp1b (ENSAPEG00000007446)	dcun1d2a (ENSAPEG00000007417)	tfdp1a (ENSAPEG00000007359)	grk1a (ENSAPEG00000007350)	mettl21cb (ENSAPEG00000007331)	jam2b (ENSAPEG00000007298)	ENSAPEG00000007265	tmtops2b (ENSAPEG00000007230)
Clown anemonefish	MODERN SPECIES	1128																nxpe3 (ENSAOCG00000020756) ##22	me3 (ENSAOCG00000020833)	ildr1b (ENSAOCG00000020866)
Spiny chromis	MODERN SPECIES	504							ENSAPOG00000007823	srpx (ENSAPOG00000007919)	ENSAPOG00000007963	OTC (ENSAPOG00000008021)	gpr161b (ENSAPOG00000008056)	dcaf6 (ENSAPOG00000008108)	mpc2b (ENSAPOG00000008148)	rpl24 (ENSAPOG00000008183)	ENSAPOG00000008206	nxpe3 (ENSAPOG00000008219) ##22	me3 (ENSAPOG00000008289)	ildr1b (ENSAPOG00000008303)	ildr2 (ENSAPOG00000008336)	ENSAPOG00000000220	pou2f1b (ENSAPOG00000008392)	ENSAPOG00000008409	lamp1b (ENSAPOG00000008417)	grtp1b (ENSAPOG00000001132)	dcun1d2a (ENSAPOG00000008487)	tfdp1a (ENSAPOG00000008568)	grk1a (ENSAPOG00000008583)	mettl21cb (ENSAPOG00000008590)	ENSAPOG00000008598	jam2b (ENSAPOG00000008626)	ENSAPOG00000008654
Bicolor damselfish	MODERN SPECIES	291	appb (ENSSPAG00000005769)	piga (ENSSPAG00000005794)	GRPR (ENSSPAG00000005818)	LANCL3 (ENSSPAG00000005853)	xk (ENSSPAG00000005870)	DYNLT3 (ENSSPAG00000005880)	SYTL5 (ENSSPAG00000005896)	srpx (ENSSPAG00000005947)	ENSSPAG00000005972	OTC (ENSSPAG00000005999)	gpr161b (ENSSPAG00000006038)	dcaf6 (ENSSPAG00000006077)	mpc2b (ENSSPAG00000006155)	rpl24 (ENSSPAG00000006170)	cep97 (ENSSPAG00000006188)	nxpe3 (ENSSPAG00000006266) ##22	me3 (ENSSPAG00000006275)	ildr1b (ENSSPAG00000006318)	ildr2 (ENSSPAG00000006336)	pou2f1b (ENSSPAG00000006360)	ENSSPAG00000006409	lamp1b (ENSSPAG00000006429)	grtp1b (ENSSPAG00000006445)	dcun1d2a (ENSSPAG00000006498)	tfdp1a (ENSSPAG00000006545)	grk1a (ENSSPAG00000006586)	mettl21cb (ENSSPAG00000006612)	ENSSPAG00000006631	jam2b (ENSSPAG00000006640)	ENSSPAG00000006669	tmtops2b (ENSSPAG00000006682)
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177	ENSGT00390000005548	ENSGT00940000164275.e	ENSGT00940000157360.d	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177	ENSGT00390000005548	ENSGT00940000164275.e	ENSGT00940000157360.d	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177	ENSGT00390000005548	ENSGT00940000164275.e	ENSGT00940000157360.d	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b
Haplochromini	ANCESTRAL SPECIES	29	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.t	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177	ENSGT00390000005548	ENSGT00940000164275.e	ENSGT00940000157360.d	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b
Haplochromini_A	ANCESTRAL SPECIES	31	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000180067	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.t	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177	ENSGT00390000005548	ENSGT00940000164275.e	ENSGT00940000157360.d	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b
P. nyererei	MODERN SPECIES	1128												ENSPNYG00000017169	mpc2b (ENSPNYG00000017200)	rpl24 (ENSPNYG00000017238)	ENSPNYG00000017344	nxpe3 (ENSPNYG00000017392) ##22
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000180067	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.t	ENSGT00510000047417.s	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177	ENSGT00390000005548	ENSGT00940000164275.e	ENSGT00940000157360.d	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b
Zebra mbuna	MODERN SPECIES	1098	LANCL3 (ENSMZEG00005022318)	xk (ENSMZEG00005022286)	DYNLT3 (ENSMZEG00005022282)	ENSMZEG00005022278	SYTL5 (ENSMZEG00005022275)	srpx (ENSMZEG00005022268)	ENSMZEG00005022263	OTC (ENSMZEG00005022259)	GPR161 (ENSMZEG00005022257)	OTC (ENSMZEG00005022228)	GPR161 (ENSMZEG00005022218)	dcaf6 (ENSMZEG00005022216)	mpc2b (ENSMZEG00005022212)	rpl24 (ENSMZEG00005022207)	ENSMZEG00005022203	nxpe3 (ENSMZEG00005022201) ##22	me3 (ENSMZEG00005022197)	creg2 (ENSMZEG00005022193)	MGAT4A (ENSMZEG00005022186)	coa5 (ENSMZEG00005022180)	si:dkey-4e7.3 (ENSMZEG00005022176)	inpp4aa (ENSMZEG00005022166)	si:ch211-229n2.6 (ENSMZEG00005022160)	slc9a2 (ENSMZEG00005022156)	MFSD9 (ENSMZEG00005022154)	tmem182a (ENSMZEG00005022152)	ENSMZEG00005022149	GPR45 (ENSMZEG00005022147)	si:dkeyp-118h3.6 (ENSMZEG00005022144)	FHL2 (ENSMZEG00005022139)	nck2a (ENSMZEG00005022136)
Burton s mouthbrooder	MODERN SPECIES	1854																nxpe3 (ENSHBUG00000004222) ##22
Lyretail cichlid	MODERN SPECIES	303	GRPR (ENSNBRG00000005782)	LANCL3 (ENSNBRG00000005753)	xk (ENSNBRG00000005711)	DYNLT3 (ENSNBRG00000005684)	ENSNBRG00000005653	ENSNBRG00000005648	srpx (ENSNBRG00000005555)	ENSNBRG00000005512	OTC (ENSNBRG00000005490)	OTC (ENSNBRG00000005455)	gpr161b (ENSNBRG00000005426)	dcaf6 (ENSNBRG00000005395)	mpc2b (ENSNBRG00000005383)	rpl24 (ENSNBRG00000005337)	ENSNBRG00000005330	nxpe3 (ENSNBRG00000005299) ##22	me3 (ENSNBRG00000005263)	creg2 (ENSNBRG00000005245)	MGAT4A (ENSNBRG00000005200)	coa5 (ENSNBRG00000005182)	si:dkey-4e7.3 (ENSNBRG00000005146)	inpp4aa (ENSNBRG00000005070)	si:ch211-229n2.6 (ENSNBRG00000005054)	slc9a2 (ENSNBRG00000004835)	MFSD9 (ENSNBRG00000004762)	tmem182a (ENSNBRG00000004727)	ENSNBRG00000004715	GPR45 (ENSNBRG00000004683)	si:dkeyp-118h3.6 (ENSNBRG00000004648)	FHL2 (ENSNBRG00000004639)	nck2a (ENSNBRG00000004625)
Nile tilapia	MODERN SPECIES	7	piga (ENSONIG00000014293)	asb11 (ENSONIG00000014292)	GRPR (ENSONIG00000042059)	LANCL3 (ENSONIG00000014289)	xk (ENSONIG00000033306)	DYNLT3 (ENSONIG00000014284)	SYTL5 (ENSONIG00000014281)	srpx (ENSONIG00000014280)	ENSONIG00000034412	OTC (ENSONIG00000014275)	gpr161b (ENSONIG00000014273)	dcaf6 (ENSONIG00000014268)	rpl24 (ENSONIG00000014266)	mpc2b (ENSONIG00000041689)	cep97 (ENSONIG00000014264)	nxpe3 (ENSONIG00000014263) ##22	me3 (ENSONIG00000014252)	creg2 (ENSONIG00000014249)	MGAT4A (ENSONIG00000014241)	coa5 (ENSONIG00000038016)	si:dkey-4e7.3 (ENSONIG00000014236)	inpp4aa (ENSONIG00000014230)	slc9a2 (ENSONIG00000014228)	mfsd9 (ENSONIG00000014227)	tmem182a (ENSONIG00000014225)	ENSONIG00000020429	GPR45 (ENSONIG00000020428)	si:dkeyp-118h3.6 (ENSONIG00000014223)	FHL2 (ENSONIG00000042852)	nck2a (ENSONIG00000014219)	ENSONIG00000033459
Midas cichlid	MODERN SPECIES	650	ENSACIG00000022493	GRPR (ENSACIG00000022467)	LANCL3 (ENSACIG00000022450)	xk (ENSACIG00000022416)	DYNLT3 (ENSACIG00000022403)	ENSACIG00000022393	ENSACIG00000022386	srpx (ENSACIG00000022363)	ENSACIG00000022350	OTC (ENSACIG00000022336)	gpr161b (ENSACIG00000022322)	dcaf6 (ENSACIG00000022310)	mpc2b (ENSACIG00000022299)	rpl24 (ENSACIG00000022262)	cep97 (ENSACIG00000022238)	nxpe3 (ENSACIG00000022226) ##22	me3 (ENSACIG00000022206)	creg2 (ENSACIG00000022188)	MGAT4A (ENSACIG00000022165)	coa5 (ENSACIG00000022143)	si:dkey-4e7.3 (ENSACIG00000022121)	inpp4aa (ENSACIG00000022094)	si:ch211-229n2.6 (ENSACIG00000022076)	slc9a2 (ENSACIG00000021928)
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00530000063252.a.b.a.b	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Mangrove rivulus	MODERN SPECIES	15	appb (ENSKMAG00000022092)	piga (ENSKMAG00000022099)	asb11 (ENSKMAG00000022104)	GRPR (ENSKMAG00000022109)	LANCL3 (ENSKMAG00000022112)	xk (ENSKMAG00000022113)	DYNLT3 (ENSKMAG00000022116)	SYTL5 (ENSKMAG00000022118)	srpx (ENSKMAG00000022123)	OTC (ENSKMAG00000022126)	gpr161b (ENSKMAG00000022128)	dcaf6 (ENSKMAG00000022131)	mpc2b (ENSKMAG00000000168)	rpl24 (ENSKMAG00000000219)	ENSKMAG00000000242	nxpe3 (ENSKMAG00000000269) ##22	me3 (ENSKMAG00000000282)	ildr1b (ENSKMAG00000000366)	ildr2 (ENSKMAG00000000375)	ENSKMAG00000000391	pou2f1b (ENSKMAG00000000503)	ENSKMAG00000000541	lamp1b (ENSKMAG00000000552)	grtp1b (ENSKMAG00000000562)	dcun1d2a (ENSKMAG00000000616)	tfdp1a (ENSKMAG00000000634)	grk1a (ENSKMAG00000000709)	mettl21cb (ENSKMAG00000000746)	ENSKMAG00000000759	jam2b (ENSKMAG00000000765)	st6gal2a (ENSKMAG00000000782)
Turquoise killifish	MODERN SPECIES	1623	GABPA (ENSNFUG00015006131)	appb (ENSNFUG00015005228)	PIGA (ENSNFUG00015005041)	asb11 (ENSNFUG00015004894)	GRPR (ENSNFUG00015004866)	XK (ENSNFUG00015004857)	DYNLT3 (ENSNFUG00015004828)	SYTL5 (ENSNFUG00015004794)	ENSNFUG00015022758	SRPX (ENSNFUG00015022745)	GPR161 (ENSNFUG00015022724)	DCAF6 (ENSNFUG00015021341)	BRP44 (ENSNFUG00015021310)	rpl24 (ENSNFUG00015021304)	cep97 (ENSNFUG00015021303)	NXPE3 (ENSNFUG00015021302) ##22	me3 (ENSNFUG00015021277)	ildr1b (ENSNFUG00015021275)	ildr2 (ENSNFUG00015021274)	ENSNFUG00015021271	ENSNFUG00015021269	POU2F1B (ENSNFUG00015021264)	lamp1b (ENSNFUG00015021261)	grtp1b (ENSNFUG00015021260)	RP42-PEN (ENSNFUG00015021254)	TFDP1A (ENSNFUG00015021253)	grk1a (ENSNFUG00015021250)	mettl21cb (ENSNFUG00015021247)	ENSNFUG00015021245	jam2b (ENSNFUG00015021242)	ST6GAL2 (ENSNFUG00015021237)
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Poeciliinae	ANCESTRAL SPECIES		ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Poecilia	ANCESTRAL SPECIES	13	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
NAME_6	ANCESTRAL SPECIES	49	ENSGT00530000063252.a.b.a.b	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Amazon molly	MODERN SPECIES	321	asb11 (ENSPFOG00000014014)	GRPR (ENSPFOG00000014018)	LANCL3 (ENSPFOG00000014036)	xk (ENSPFOG00000014073)	DYNLT3 (ENSPFOG00000014091)	SYTL5 (ENSPFOG00000014095)	srpx (ENSPFOG00000014216)	ENSPFOG00000014293	OTC (ENSPFOG00000014360)	gpr161b (ENSPFOG00000014435)	OTC (ENSPFOG00000014396)	dcaf6 (ENSPFOG00000014465)	mpc2b (ENSPFOG00000014548)	rpl24 (ENSPFOG00000014554)	cep97 (ENSPFOG00000014597)	nxpe3 (ENSPFOG00000014675) ##22	me3 (ENSPFOG00000014688)	ildr1b (ENSPFOG00000014793)	ildr2 (ENSPFOG00000014843)	ENSPFOG00000014866	pou2f1b (ENSPFOG00000014888)	lamp1b (ENSPFOG00000014931)	grtp1b (ENSPFOG00000014947)	dcun1d2a (ENSPFOG00000014984)	tfdp1a (ENSPFOG00000015018)	grk1a (ENSPFOG00000015075)	mettl21cb (ENSPFOG00000015105)	ENSPFOG00000022949	jam2b (ENSPFOG00000015115)	st6gal2a (ENSPFOG00000015157)	tmtops2b (ENSPFOG00000015179)
Sailfin molly	MODERN SPECIES	725										OTC (ENSPLAG00000020832)	gpr161b (ENSPLAG00000020805)	dcaf6 (ENSPLAG00000020784)	mpc2b (ENSPLAG00000020690)	rpl24 (ENSPLAG00000020665)	cep97 (ENSPLAG00000020659)	nxpe3 (ENSPLAG00000020552) ##22	me3 (ENSPLAG00000020525)	ildr1b (ENSPLAG00000020490)	ildr2 (ENSPLAG00000020447)	ENSPLAG00000020425	pou2f1b (ENSPLAG00000020393)	ENSPLAG00000020379	lamp1b (ENSPLAG00000020363)	grtp1b (ENSPLAG00000020352)	dcun1d2a (ENSPLAG00000020328)	tfdp1a (ENSPLAG00000020307)	grk1a (ENSPLAG00000020297)	mettl21cb (ENSPLAG00000020271)	jam2b (ENSPLAG00000020248)
Guppy	MODERN SPECIES	450	mid1ip1b (ENSPREG00000010338)	tspan7b (ENSPREG00000010316)	ENSPREG00000010294	ENSPREG00000010260	dnajc27 (ENSPREG00000010228)	ENSPREG00000010217	srpx (ENSPREG00000010207)	ENSPREG00000010180	OTC (ENSPREG00000010161)	gpr161b (ENSPREG00000010136)	dcaf6 (ENSPREG00000010047)	mpc2b (ENSPREG00000010013)	rpl24 (ENSPREG00000009982)	ENSPREG00000009971	ENSPREG00000009941	nxpe3 (ENSPREG00000009934) ##22	me3 (ENSPREG00000009844)	ildr1b (ENSPREG00000009773)	ildr2 (ENSPREG00000009751)	ENSPREG00000009722	pou2f1b (ENSPREG00000009681)	lamp1b (ENSPREG00000009647)	grtp1b (ENSPREG00000009638)	dcun1d2a (ENSPREG00000009618)	tfdp1a (ENSPREG00000009556)	grk1a (ENSPREG00000009528)	mettl21cb (ENSPREG00000009472)	jam2b (ENSPREG00000009428)	st6gal2a (ENSPREG00000009371)	tmtops2b (ENSPREG00000009345)	uxs1 (ENSPREG00000009314)
Platyfish	MODERN SPECIES	21	asb11 (ENSXMAG00000011976)	GRPR (ENSXMAG00000011969)	LANCL3 (ENSXMAG00000027250)	xk (ENSXMAG00000029932)	DYNLT3 (ENSXMAG00000011955)	SYTL5 (ENSXMAG00000011920)	srpx (ENSXMAG00000011909)	ENSXMAG00000024447	ENSXMAG00000024323	OTC (ENSXMAG00000011883)	gpr161b (ENSXMAG00000028591)	dcaf6 (ENSXMAG00000011866)	mpc2b (ENSXMAG00000029845)	rpl24 (ENSXMAG00000029781)	cep97 (ENSXMAG00000011833)	nxpe3 (ENSXMAG00000011826) ##22	me3 (ENSXMAG00000011790)	ildr1b (ENSXMAG00000011785)	ildr2 (ENSXMAG00000011776)	ENSXMAG00000011769	pou2f1b (ENSXMAG00000011697)	ENSXMAG00000028594	lamp1b (ENSXMAG00000011695)	grtp1b (ENSXMAG00000011689)	dcun1d2a (ENSXMAG00000026746)	tfdp1a (ENSXMAG00000011667)	grk1a (ENSXMAG00000011659)	mettl21cb (ENSXMAG00000025863)	ENSXMAG00000028777	jam2b (ENSXMAG00000024003)	st6gal2a (ENSXMAG00000029471)
NAME_4	ANCESTRAL SPECIES	25	ENSGT01030000237909	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s.f	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Sheepshead minnow	MODERN SPECIES	449		MAST2 (ENSCVAG00000016401)	DYNLT3 (ENSCVAG00000016336)	xk (ENSCVAG00000016192)	LANCL3 (ENSCVAG00000016189)	GRPR (ENSCVAG00000016152)	asb11 (ENSCVAG00000016102)	piga (ENSCVAG00000016095)	OTC (ENSCVAG00000016086)	gpr161b (ENSCVAG00000016079)	dcaf6 (ENSCVAG00000016056)	mpc2b (ENSCVAG00000016025)	rpl24 (ENSCVAG00000016007)	ENSCVAG00000000938	ENSCVAG00000015977	nxpe3 (ENSCVAG00000015971) ##22	me3 (ENSCVAG00000015945)	ildr1b (ENSCVAG00000015036)	ildr2 (ENSCVAG00000000386)	ENSCVAG00000015004	tspan7b (ENSCVAG00000014997)	mid1ip1a (ENSCVAG00000014981)	ENSCVAG00000014966	bcor (ENSCVAG00000014940)	COL8A1 (ENSCVAG00000014919)	jagn1a (ENSCVAG00000014898)	tfg (ENSCVAG00000014881)	ENSCVAG00000014838	ENSCVAG00000014799	ENSCVAG00000014772	atp6ap2 (ENSCVAG00000014718)
Mummichog	MODERN SPECIES	2211					xk (ENSFHEG00000014386)	DYNLT3 (ENSFHEG00000014376)	SYTL5 (ENSFHEG00000000346)	srpx (ENSFHEG00000000726)	OTC (ENSFHEG00000014260)	gpr161b (ENSFHEG00000014236)	dcaf6 (ENSFHEG00000014215)	mpc2b (ENSFHEG00000014184)	rpl24 (ENSFHEG00000014168)	ENSFHEG00000000622	cep97 (ENSFHEG00000014151)	nxpe3 (ENSFHEG00000014140) ##22	me3 (ENSFHEG00000014126)	ildr1b (ENSFHEG00000014096)	ildr2 (ENSFHEG00000014081)	ENSFHEG00000014050	pou2f1b (ENSFHEG00000014004)	ENSFHEG00000013979	lamp1b (ENSFHEG00000013969)	grtp1b (ENSFHEG00000013959)	dcun1d2a (ENSFHEG00000013928)	tfdp1a (ENSFHEG00000013896)	grk1a (ENSFHEG00000013842)	mettl21cb (ENSFHEG00000013195)	ENSFHEG00000013185	jam2b (ENSFHEG00000013179)	st6gal2a (ENSFHEG00000013166)
Oryzias	ANCESTRAL SPECIES	10	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.c.f	ENSGT01030000234915.g	ENSGT01030000234513.B.b.c.e	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00940000165604.b	ENSGT00940000165376	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633.id.a	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a.y	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157868	ENSGT00390000000145
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT01030000234513.B.b.c.f.a	ENSGT01030000234915.h	ENSGT01030000234513.B.b.c.f.b	ENSGT01030000234915.g	ENSGT01030000234513.B.b.c.e	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00940000165604.b	ENSGT00940000165376	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633.id.a	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a.y	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b.e	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157868	ENSGT00390000000145
Javanese ricefish	MODERN SPECIES	13	gjb8 (ENSOJAG00000022979)	ENSOJAG00000022985	gjb8 (ENSOJAG00000022987)	ENSOJAG00000022989	gjb8 (ENSOJAG00000003519)	gja3 (ENSOJAG00000003530)	ZMYM2 (ENSOJAG00000003553)	ENSOJAG00000003636	ENSOJAG00000003856	ENSOJAG00000004044	ENSOJAG00000004128	ENSOJAG00000004469	mpc2b (ENSOJAG00000004762)	rpl24 (ENSOJAG00000004798)	cep97 (ENSOJAG00000004862)	nxpe3 (ENSOJAG00000004943) ##22	me3 (ENSOJAG00000005176)	ildr1b (ENSOJAG00000006050)	ENSOJAG00000006076	ENSOJAG00000006112	ENSOJAG00000006274	ENSOJAG00000006301	pou2f1b (ENSOJAG00000006335)	lamp1b (ENSOJAG00000006604)	ENSOJAG00000006626	grtp1b (ENSOJAG00000006635)	dcun1d2a (ENSOJAG00000006689)	tfdp1a (ENSOJAG00000006900)	grk1a (ENSOJAG00000006990)	jam2b (ENSOJAG00000007016)	st6gal2a (ENSOJAG00000007062)
Indian medaka	MODERN SPECIES	18	gjb8 (ENSOMEG00000009625)	gja3 (ENSOMEG00000009636)	ZMYM2 (ENSOMEG00000009672)	ENSOMEG00000009733	ENSOMEG00000009786	ENSOMEG00000009800	ENSOMEG00000009822	ENSOMEG00000009891	ENSOMEG00000009956	mpc2b (ENSOMEG00000009993)	rpl24 (ENSOMEG00000010034)	il17d (ENSOMEG00000010050)	eef1akmt1 (ENSOMEG00000010074)	cep97 (ENSOMEG00000010128)	me3 (ENSOMEG00000010145)	nxpe3 (ENSOMEG00000010159) ##22	me3 (ENSOMEG00000010229)	ildr1b (ENSOMEG00000010265)	ildr2 (ENSOMEG00000010332)	ENSOMEG00000010363	pou2f1b (ENSOMEG00000000766)	lamp1b (ENSOMEG00000010496)	grtp1b (ENSOMEG00000010514)	dcun1d2a (ENSOMEG00000010554)	tfdp1a (ENSOMEG00000010606)	grk1a (ENSOMEG00000010633)	jam2b (ENSOMEG00000010652)	st6gal2a (ENSOMEG00000010676)	tmtops2b (ENSOMEG00000010705)	uxs1 (ENSOMEG00000010779)	ecrg4a (ENSOMEG00000010822)
Oryzias_a	ANCESTRAL SPECIES	36	ENSGT01030000234915.h	ENSGT01030000234513.B.b.c.f	ENSGT01030000234915.g	ENSGT01030000234513.B.b.c.e	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00730000111087	ENSGT00940000165376	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000154633.id.a	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00940000180737	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a.y	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157868	ENSGT00390000000145
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	310																ENSOSIG00000005298 ##22	me3 (ENSOSIG00000001126)
Chinese medaka	MODERN SPECIES	2931																nxpe3 (ENSOSIG00000003022) ##22
Japanese Medaka HdrR	MODERN SPECIES	13	gjb8 (ENSORLG00000025272)	ENSORLG00000026068	gjb8 (ENSORLG00000012947)	gja3 (ENSORLG00000012942)	ZMYM2 (ENSORLG00000012930)	ENSORLG00000012885	ENSORLG00000012855	ENSORLG00000022779	ENSORLG00000029313	ENSORLG00000012818	ENSORLG00000012779	mpc2b (ENSORLG00000012767)	rpl24 (ENSORLG00000012759)	ENSORLG00000024100	cep97 (ENSORLG00000012748)	nxpe3 (ENSORLG00000029535) ##22	me3 (ENSORLG00000003470)	ildr1b (ENSORLG00000012732)	ildr2 (ENSORLG00000012725)	ENSORLG00000012710	pou2f1b (ENSORLG00000012704)	lamp1b (ENSORLG00000012668)	grtp1b (ENSORLG00000012661)	dcun1d2a (ENSORLG00000023724)	tfdp1a (ENSORLG00000012628)	GRK1 (ENSORLG00000012586)	ENSORLG00000024699	jam2b (ENSORLG00000012572)	st6gal2a (ENSORLG00000012556)	tmtops2b (ENSORLG00000012534)	ENSORLG00000027753
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Eupercaria	ANCESTRAL SPECIES	18	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00530000063252.a.b.a.b	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.a.a	ENSGT01100000263502.A.a.a.a.b.a.a
Fugu	MODERN SPECIES		appb (ENSTRUG00000010922)	piga (ENSTRUG00000011115)	asb11 (ENSTRUG00000011170)	GRPR (ENSTRUG00000011209)	LANCL3 (ENSTRUG00000011377)	xk (ENSTRUG00000026862)	DYNLT3 (ENSTRUG00000028537)	SYTL5 (ENSTRUG00000011476)	srpx (ENSTRUG00000011607)	OTC (ENSTRUG00000011713)	gpr161b (ENSTRUG00000024089)	dcaf6 (ENSTRUG00000011949)	mpc2b (ENSTRUG00000012189)	rpl24 (ENSTRUG00000012199)	cep97 (ENSTRUG00000012266)	nxpe3 (ENSTRUG00000012334) ##22	me3 (ENSTRUG00000012404)	ildr1b (ENSTRUG00000012684)	ildr2 (ENSTRUG00000012720)	ENSTRUG00000026688	pou2f1b (ENSTRUG00000012822)	ENSTRUG00000024519	lamp1b (ENSTRUG00000012964)	grtp1b (ENSTRUG00000012971)	dcun1d2a (ENSTRUG00000025379)	tfdp1a (ENSTRUG00000013098)	grk1a (ENSTRUG00000013181)	mettl21cb (ENSTRUG00000013260)	ENSTRUG00000024460	jam2b (ENSTRUG00000013286)	ENSTRUG00000028369
Tetraodon	MODERN SPECIES	13	u2af1 (ENSTNIG00000013914)	gabpa (ENSTNIG00000013913)	appb (ENSTNIG00000013912)	piga (ENSTNIG00000013911)	asb11 (ENSTNIG00000013910)	GRPR (ENSTNIG00000013909)	LANCL3 (ENSTNIG00000013908)	xk (ENSTNIG00000013907)	DYNLT3 (ENSTNIG00000013906)	srpx (ENSTNIG00000013905)	OTC (ENSTNIG00000013904)	gpr161b (ENSTNIG00000013903)	dcaf6 (ENSTNIG00000013902)	rpl24 (ENSTNIG00000013901)	cep97 (ENSTNIG00000013900)	nxpe3 (ENSTNIG00000013899) ##22	me3 (ENSTNIG00000013898)	ildr1b (ENSTNIG00000013897)	ildr2 (ENSTNIG00000013896)	ENSTNIG00000013895	ENSTNIG00000013894	ENSTNIG00000013893	pou2f1b (ENSTNIG00000013892)	lamp1b (ENSTNIG00000001256)	lamp1b (ENSTNIG00000001591)	grtp1b (ENSTNIG00000013891)	dcun1d2a (ENSTNIG00000013890)	tfdp1a (ENSTNIG00000013889)	grk1a (ENSTNIG00000013888)	mettl21cb (ENSTNIG00000013887)	ENSTNIG00000013886
Eupecaria_A	ANCESTRAL SPECIES	18	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Ballan wrasse	MODERN SPECIES	316	piga (ENSLBEG00000000785)	asb11 (ENSLBEG00000000827)	GRPR (ENSLBEG00000000852)	LANCL3 (ENSLBEG00000000926)	xk (ENSLBEG00000000964)	DYNLT3 (ENSLBEG00000000982)	SYTL5 (ENSLBEG00000001000)	srpx (ENSLBEG00000001038)	ENSLBEG00000001104	OTC (ENSLBEG00000001188)	gpr161b (ENSLBEG00000001389)	dcaf6 (ENSLBEG00000001424)	mpc2b (ENSLBEG00000001456)	rpl24 (ENSLBEG00000001496)	ENSLBEG00000001547	nxpe3 (ENSLBEG00000001562) ##22	me3 (ENSLBEG00000001595)	ildr1b (ENSLBEG00000001636)	ildr2 (ENSLBEG00000001664)	ENSLBEG00000001688	pou2f1b (ENSLBEG00000001737)	lamp1b (ENSLBEG00000001766)	grtp1b (ENSLBEG00000001774)	dcun1d2a (ENSLBEG00000001827)	tfdp1a (ENSLBEG00000001874)	grk1a (ENSLBEG00000001916)	mettl21cb (ENSLBEG00000001959)	jam2b (ENSLBEG00000002064)
Eupecaria_B	ANCESTRAL SPECIES	18	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616.d	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	18	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616.d	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Large yellow croaker	MODERN SPECIES	490	piga (ENSLCRG00005015891)	asb11 (ENSLCRG00005015893)	GRPR (ENSLCRG00005015894)	LANCL3 (ENSLCRG00005015895)	xk (ENSLCRG00005015896)	DYNLT3 (ENSLCRG00005015897)	SYTL5 (ENSLCRG00005015898)	srpx (ENSLCRG00005015900)	ENSLCRG00005015963	OTC (ENSLCRG00005015967)	gpr161b (ENSLCRG00005015997)	dcaf6 (ENSLCRG00005016026)	mpc2b (ENSLCRG00005017385)	rpl24 (ENSLCRG00005017386)	cep97 (ENSLCRG00005017393)	nxpe3 (ENSLCRG00005010156) ##22	me3 (ENSLCRG00005010161)	ildr1b (ENSLCRG00005011638)	ildr2 (ENSLCRG00005011640)	ENSLCRG00005011646	pou2f1b (ENSLCRG00005011648)	ENSLCRG00005011767	lamp1b (ENSLCRG00005011768)	grtp1b (ENSLCRG00005011770)	dcun1d2a (ENSLCRG00005011771)	tfdp1a (ENSLCRG00005011808)	grk1a (ENSLCRG00005011813)	mettl21cb (ENSLCRG00005011816)	ENSLCRG00005011817	jam2b (ENSLCRG00005011818)	st6gal2a (ENSLCRG00005011819)
European seabass	MODERN SPECIES	5	ENSDLAG00005011396	ENSDLAG00005011454	ENSDLAG00005011555	LANCL3 (ENSDLAG00005026508)	XK (ENSDLAG00005011573)	DYNLT3 (ENSDLAG00005026352)	SYTL5 (ENSDLAG00005011612)	srpx (ENSDLAG00005011646)	ENSDLAG00005011848	OTC (ENSDLAG00005031945)	gpr161b (ENSDLAG00005012014)	ENSDLAG00005012037	mpc2b (ENSDLAG00005013375)	RPL24 (ENSDLAG00005013403)	ENSDLAG00005013477	nxpe3 (ENSDLAG00005013512) ##22	me3 (ENSDLAG00005013570)	ildr1b (ENSDLAG00005015273)	ildr2 (ENSDLAG00005015280)	pou2f1b (ENSDLAG00005028998)	GPA33 (ENSDLAG00005022007)	ENSDLAG00005015793	lamp1b (ENSDLAG00005015802)	grtp1b (ENSDLAG00005028293)	dcun1d2a (ENSDLAG00005015860)	tfdp1a (ENSDLAG00005035138)	ENSDLAG00005015944	mettl21cb (ENSDLAG00005015951)	jam2b (ENSDLAG00005015964)	st6gal2a (ENSDLAG00005015986)	tmtops2b (ENSDLAG00005016004)
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	23	asb11 (ENSSAUG00010012218)	GRPR (ENSSAUG00010012214)	LANCL3 (ENSSAUG00010012212)	xk (ENSSAUG00010012210)	DYNLT3 (ENSSAUG00010012208)	SYTL5 (ENSSAUG00010012199)	srpx (ENSSAUG00010011674)	ENSSAUG00010011669	OTC (ENSSAUG00010011266)	gpr161b (ENSSAUG00010011263)	dcaf6 (ENSSAUG00010009671)	mpc2b (ENSSAUG00010009636)	ENSSAUG00010009635	rpl24 (ENSSAUG00010009630)	cep97 (ENSSAUG00010009592)	nxpe3 (ENSSAUG00010009588) ##22	nxpe3 (ENSSAUG00010009585) ##22	me3 (ENSSAUG00010001724)	ildr1b (ENSSAUG00010001295)	ildr2 (ENSSAUG00010001292)	ENSSAUG00010022370	pou2f1b (ENSSAUG00010022367)	ENSSAUG00010022364	lamp1b (ENSSAUG00010022363)	grtp1b (ENSSAUG00010022361)	dcun1d2a (ENSSAUG00010022357)	tfdp1a (ENSSAUG00010022348)	grk1a (ENSSAUG00010022347)	mettl21cb (ENSSAUG00010022344)	ENSSAUG00010022343	jam2b (ENSSAUG00010022342)
Gilthead seabream	MODERN SPECIES	23	GRPR (ENSSAUG00010012214)	LANCL3 (ENSSAUG00010012212)	xk (ENSSAUG00010012210)	DYNLT3 (ENSSAUG00010012208)	SYTL5 (ENSSAUG00010012199)	srpx (ENSSAUG00010011674)	ENSSAUG00010011669	OTC (ENSSAUG00010011266)	gpr161b (ENSSAUG00010011263)	dcaf6 (ENSSAUG00010009671)	mpc2b (ENSSAUG00010009636)	ENSSAUG00010009635	rpl24 (ENSSAUG00010009630)	cep97 (ENSSAUG00010009592)	nxpe3 (ENSSAUG00010009588) ##22	nxpe3 (ENSSAUG00010009585) ##22	me3 (ENSSAUG00010001724)	ildr1b (ENSSAUG00010001295)	ildr2 (ENSSAUG00010001292)	ENSSAUG00010022370	pou2f1b (ENSSAUG00010022367)	ENSSAUG00010022364	lamp1b (ENSSAUG00010022363)	grtp1b (ENSSAUG00010022361)	dcun1d2a (ENSSAUG00010022357)	tfdp1a (ENSSAUG00010022348)	grk1a (ENSSAUG00010022347)	mettl21cb (ENSSAUG00010022344)	ENSSAUG00010022343	jam2b (ENSSAUG00010022342)	ENSSAUG00010022341
Perciformes	ANCESTRAL SPECIES	20	ENSGT01030000237909	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a
Perciformes_a	ANCESTRAL SPECIES	21	ENSGT00530000063252.a.b.a.b	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a
Pike perch	MODERN SPECIES	1	appb (ENSSLUG00000016438)	piga (ENSSLUG00000016226)	asb11 (ENSSLUG00000016223)	GRPR (ENSSLUG00000016214)	xk (ENSSLUG00000016206)	DYNLT3 (ENSSLUG00000016196)	SYTL5 (ENSSLUG00000016194)	srpx (ENSSLUG00000016163)	ENSSLUG00000016147	OTC (ENSSLUG00000016136)	gpr161b (ENSSLUG00000016129)	dcaf6 (ENSSLUG00000015972)	mpc2b (ENSSLUG00000015916)	rpl24 (ENSSLUG00000015888)	cep97 (ENSSLUG00000015863)	nxpe3 (ENSSLUG00000015852) ##22	me3 (ENSSLUG00000010384)	ildr1b (ENSSLUG00000010203)	ildr2 (ENSSLUG00000010197)	ENSSLUG00000010194	pou2f1b (ENSSLUG00000010188)	ENSSLUG00000010184	lamp1b (ENSSLUG00000010179)	grtp1b (ENSSLUG00000010164)	dcun1d2a (ENSSLUG00000010115)	tfdp1a (ENSSLUG00000010096)	grk1a (ENSSLUG00000009970)	mettl21cb (ENSSLUG00000009956)	jam2b (ENSSLUG00000009951)	ENSSLUG00000009946	tmtops2b (ENSSLUG00000009942)
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000008771	zgc:136493 (ENSCGOG00000008744)	CNTNAP5 (ENSCGOG00000008656)	ahr2 (ENSCGOG00000008393)	KALRN (ENSCGOG00000008273)	ABCB6 (ENSCGOG00000008269)	prkag3b (ENSCGOG00000008244)	ENSCGOG00000008237	ENSCGOG00000008232	OTC (ENSCGOG00000008058)	gpr161b (ENSCGOG00000008056)	dcaf6 (ENSCGOG00000007164)	mpc2b (ENSCGOG00000007144)	rpl24 (ENSCGOG00000007141)	cep97 (ENSCGOG00000007139)	nxpe3 (ENSCGOG00000007133) ##22	me3 (ENSCGOG00000003803)	ildr1b (ENSCGOG00000003716)	ildr2 (ENSCGOG00000003708)	ENSCGOG00000003699	pou2f1b (ENSCGOG00000003513)	ENSCGOG00000003508	lamp1b (ENSCGOG00000003506)	grtp1b (ENSCGOG00000003492)	dcun1d2a (ENSCGOG00000003479)	tfdp1a (ENSCGOG00000003385)	grk1a (ENSCGOG00000003281)	mettl21cb (ENSCGOG00000003274)	jam2b (ENSCGOG00000003271)	st6gal2a (ENSCGOG00000003267)	tmtops2b (ENSCGOG00000003262)
Cottioidei	ANCESTRAL SPECIES	14	ENSGT01030000237909	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157868
Stickleback	MODERN SPECIES	16	ENSGACG00000003420	piga (ENSGACG00000003400)	asb11 (ENSGACG00000003395)	GRPR (ENSGACG00000003391)	xk (ENSGACG00000003384)	DYNLT3 (ENSGACG00000003355)	SYTL5 (ENSGACG00000003344)	srpx (ENSGACG00000003318)	ENSGACG00000003314	OTC (ENSGACG00000003296)	gpr161b (ENSGACG00000003291)	dcaf6 (ENSGACG00000003276)	mpc2b (ENSGACG00000003264)	rpl24 (ENSGACG00000003250)	cep97 (ENSGACG00000003240)	nxpe3 (ENSGACG00000003237) ##22	me3 (ENSGACG00000003184)	ildr1b (ENSGACG00000003173)	ildr2 (ENSGACG00000003166)	ENSGACG00000003161	pou2f1b (ENSGACG00000003150)	lamp1b (ENSGACG00000003146)	grtp1b (ENSGACG00000003127)	dcun1d2a (ENSGACG00000003116)	tfdp1a (ENSGACG00000003108)	grk1a (ENSGACG00000003079)	mettl21cb (ENSGACG00000003076)	jam2b (ENSGACG00000003073)	st6gal2a (ENSGACG00000003067)	tmtops2b (ENSGACG00000003063)	uxs1 (ENSGACG00000003038)
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT01100000265732	ENSGT00940000166048.a.a	ENSGT00940000165208.b
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a
Climbing perch	MODERN SPECIES	12	ENSATEG00000010661	ENSATEG00000010556	ENSATEG00000010497	LANCL3 (ENSATEG00000010445)	XK (ENSATEG00000025476)	DYNLT3 (ENSATEG00000010435)	SYTL5 (ENSATEG00000010343)	srpx (ENSATEG00000010304)	ENSATEG00000025996	OTC (ENSATEG00000010214)	gpr161b (ENSATEG00000010177)	ENSATEG00000010130	mpc2b (ENSATEG00000025228)	RPL24 (ENSATEG00000028928)	ENSATEG00000029367	nxpe3 (ENSATEG00000010047) ##22	me3 (ENSATEG00000009991)	ildr1b (ENSATEG00000009968)	ildr2 (ENSATEG00000009911)	pou2f1b (ENSATEG00000009788)	ENSATEG00000009773	lamp1b (ENSATEG00000009745)	grtp1b (ENSATEG00000028451)	dcun1d2a (ENSATEG00000027873)	tfdp1a (ENSATEG00000009617)	ENSATEG00000009573	mettl21cb (ENSATEG00000009547)	jam2b (ENSATEG00000009527)	st6gal2a (ENSATEG00000009508)	tmtops2b (ENSATEG00000009482)	uxs1 (ENSATEG00000009425)
Siamese fighting fish	MODERN SPECIES	11	piga (ENSBSLG00000017675)	asb11 (ENSBSLG00000017667)	GRPR (ENSBSLG00000017658)	LANCL3 (ENSBSLG00000017640)	xk (ENSBSLG00000017619)	DYNLT3 (ENSBSLG00000017592)	SYTL5 (ENSBSLG00000017496)	srpx (ENSBSLG00000017343)	ENSBSLG00000016973	OTC (ENSBSLG00000016720)	gpr161b (ENSBSLG00000016592)	dcaf6 (ENSBSLG00000014774)	mpc2b (ENSBSLG00000014713)	rpl24 (ENSBSLG00000014687)	cep97 (ENSBSLG00000014673)	nxpe3 (ENSBSLG00000014647) ##22	me3 (ENSBSLG00000014177)	ildr1b (ENSBSLG00000014142)	ildr2 (ENSBSLG00000014093)	ENSBSLG00000014058	pou2f1b (ENSBSLG00000013759)	ENSBSLG00000013747	lamp1b (ENSBSLG00000013740)	grtp1b (ENSBSLG00000013729)	dcun1d2a (ENSBSLG00000013626)	tfdp1a (ENSBSLG00000013519)	grk1a (ENSBSLG00000013574)	mettl21cb (ENSBSLG00000013495)	jam2b (ENSBSLG00000013463)	st6gal2a (ENSBSLG00000013433)	tmtops2b (ENSBSLG00000013423)
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000015623	ENSMAMG00000015646	ENSMAMG00000015688	LANCL3 (ENSMAMG00000015716)	XK (ENSMAMG00000027172)	DYNLT3 (ENSMAMG00000015734)	SYTL5 (ENSMAMG00000015749)	srpx (ENSMAMG00000015764)	ENSMAMG00000027193	OTC (ENSMAMG00000015836)	gpr161b (ENSMAMG00000015881)	ENSMAMG00000015891	mpc2b (ENSMAMG00000026972)	RPL24 (ENSMAMG00000026770)	ENSMAMG00000015960	nxpe3 (ENSMAMG00000015975) ##22	me3 (ENSMAMG00000015988)	ildr1b (ENSMAMG00000016021)	ildr2 (ENSMAMG00000016035)	ENSMAMG00000016075	pou2f1b (ENSMAMG00000016182)	ENSMAMG00000028131	lamp1b (ENSMAMG00000016314)	grtp1b (ENSMAMG00000016347)	dcun1d2a (ENSMAMG00000016370)	tfdp1a (ENSMAMG00000016403)	ENSMAMG00000016422	mettl21cb (ENSMAMG00000016443)	jam2b (ENSMAMG00000025440)	st6gal2a (ENSMAMG00000024515)	tmtops2b (ENSMAMG00000016465)
Carangaria	ANCESTRAL SPECIES	12	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT01100000265732	ENSGT00940000166048.a.a	ENSGT00940000165208.b
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A.d	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT01100000265732	ENSGT00940000165208.b	ENSGT00940000158714.d.b
Seriola	ANCESTRAL SPECIES	6	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A.d	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT01100000265732	ENSGT00940000165208.b	ENSGT00940000157053.u.b
Greater amberjack	MODERN SPECIES	21	piga (ENSSDUG00000005426)	asb11 (ENSSDUG00000005446)	GRPR (ENSSDUG00000005463)	LANCL3 (ENSSDUG00000005492)	xk (ENSSDUG00000005505)	DYNLT3 (ENSSDUG00000005516)	SYTL5 (ENSSDUG00000005541)	srpx (ENSSDUG00000005569)	ENSSDUG00000005597	OTC (ENSSDUG00000005612)	gpr161b (ENSSDUG00000005660)	dcaf6 (ENSSDUG00000005699)	mpc2b (ENSSDUG00000005722)	rpl24 (ENSSDUG00000005745)	ENSSDUG00000005781	nxpe3 (ENSSDUG00000005794) ##22	me3 (ENSSDUG00000005817)	ildr1b (ENSSDUG00000005895)	ildr2 (ENSSDUG00000005917)	ENSSDUG00000005959	pou2f1b (ENSSDUG00000005992)	ENSSDUG00000006057	lamp1b (ENSSDUG00000006073)	grtp1b (ENSSDUG00000006094)	dcun1d2a (ENSSDUG00000006119)	tfdp1a (ENSSDUG00000006151)	grk1a (ENSSDUG00000006185)	mettl21cb (ENSSDUG00000006196)	jam2b (ENSSDUG00000006202)	ENSSDUG00000006221	tmtops2b (ENSSDUG00000006252)
Yellowtail amberjack	MODERN SPECIES	2951	piga (ENSSLDG00000019387)	asb11 (ENSSLDG00000019280)	GRPR (ENSSLDG00000019234)	LANCL3 (ENSSLDG00000019217)	xk (ENSSLDG00000019210)	DYNLT3 (ENSSLDG00000019197)	SYTL5 (ENSSLDG00000019172)	srpx (ENSSLDG00000019085)	ENSSLDG00000019042	OTC (ENSSLDG00000019002)	gpr161b (ENSSLDG00000018990)	dcaf6 (ENSSLDG00000018835)	mpc2b (ENSSLDG00000018785)	rpl24 (ENSSLDG00000018738)	ENSSLDG00000018723	nxpe3 (ENSSLDG00000018710) ##22	me3 (ENSSLDG00000018670)	ildr1b (ENSSLDG00000018651)	ildr2 (ENSSLDG00000018630)	ENSSLDG00000018601	pou2f1b (ENSSLDG00000018572)	lamp1b (ENSSLDG00000018552)	grtp1b (ENSSLDG00000018522)	dcun1d2a (ENSSLDG00000018504)	tfdp1a (ENSSLDG00000018465)	grk1a (ENSSLDG00000018437)	mettl21cb (ENSSLDG00000018426)	ENSSLDG00000018413	jam2b (ENSSLDG00000018403)	ENSSLDG00000018389	tmtops2b (ENSSLDG00000018373)
Barramundi perch	MODERN SPECIES	142	igf2bp2a (ENSLCAG00010023821)	tmem41aa (ENSLCAG00010023814)	ehhadh (ENSLCAG00010023810)	zgc:162707 (ENSLCAG00010023808)	nme9 (ENSLCAG00010023799)	SMARCAL1 (ENSLCAG00010023788)	MARCHF4 (ENSLCAG00010023784)	COL6A2 (ENSLCAG00010023774)	xrcc5 (ENSLCAG00010023762)	OTC (ENSLCAG00010023748)	gpr161b (ENSLCAG00010023744)	dcaf6 (ENSLCAG00010023701)	mpc2b (ENSLCAG00010023666)	rpl24 (ENSLCAG00010023664)	cep97 (ENSLCAG00010023653)	nxpe3 (ENSLCAG00010023641) ##22	me3 (ENSLCAG00010023581)	ildr1b (ENSLCAG00010023542)	ildr2 (ENSLCAG00010023539)	ENSLCAG00010023532	pou2f1b (ENSLCAG00010023521)	ENSLCAG00010023516	lamp1b (ENSLCAG00010023514)	grtp1b (ENSLCAG00010023511)	dcun1d2a (ENSLCAG00010023492)	tfdp1a (ENSLCAG00010023480)	grk1a (ENSLCAG00010023310)	mettl21cb (ENSLCAG00010023275)	jam2b (ENSLCAG00010023271)	st6gal2a (ENSLCAG00010023267)	tmtops2b (ENSLCAG00010023265)
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00530000063252.a.b.a.b	ENSGT00390000014405	ENSGT00940000166315	ENSGT01100000263512.b.b.a.j	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00940000157831	ENSGT00940000177034	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a
Turbot	MODERN SPECIES	5	ENSSMAG00000019063	ENSSMAG00000019112	ENSSMAG00000019147	DYNLT3 (ENSSMAG00000019204)	ENSSMAG00000019155	XK (ENSSMAG00000019183)	SYTL5 (ENSSMAG00000019208)	srpx (ENSSMAG00000019235)	ENSSMAG00000019254	OTC (ENSSMAG00000019270)	gpr161b (ENSSMAG00000019278)	ENSSMAG00000019291	mpc2b (ENSSMAG00000019389)	RPL24 (ENSSMAG00000019403)	ENSSMAG00000019410	nxpe3 (ENSSMAG00000019472) ##22	me3 (ENSSMAG00000019475)	ildr1b (ENSSMAG00000019498)	ildr2 (ENSSMAG00000019518)	ENSSMAG00000019530	pou2f1b (ENSSMAG00000019533)	ENSSMAG00000019577	ENSSMAG00000019585	lamp1b (ENSSMAG00000022080)	grtp1b (ENSSMAG00000019606)	dcun1d2a (ENSSMAG00000019610)	TFDP1 (ENSSMAG00000019629)	ENSSMAG00000019666	mettl21cb (ENSSMAG00000027488)	ENSSMAG00000019686	ENSSMAG00000036309
Tongue sole	MODERN SPECIES	7	PLCL1 (ENSCSEG00000003897)	satb2 (ENSCSEG00000003906)	dnajb11 (ENSCSEG00000003917)	tbccd1 (ENSCSEG00000003925)	rif1 (ENSCSEG00000003945)	xk (ENSCSEG00000003969)	SYTL5 (ENSCSEG00000003988)	srpx (ENSCSEG00000003992)	OTC (ENSCSEG00000003995)	gpr161b (ENSCSEG00000004004)	dcaf6 (ENSCSEG00000004015)	mpc2b (ENSCSEG00000004043)	rpl24 (ENSCSEG00000004049)	ENSCSEG00000004059	tuba8l2 (ENSCSEG00000004061)	nxpe3 (ENSCSEG00000004065) ##22	me3 (ENSCSEG00000004073)	ildr1b (ENSCSEG00000004095)	ildr2 (ENSCSEG00000004104)	ENSCSEG00000004112	pou2f1b (ENSCSEG00000004122)	lamp1b (ENSCSEG00000004146)	grtp1b (ENSCSEG00000004149)	dcun1d2a (ENSCSEG00000004160)	tfdp1a (ENSCSEG00000004170)	grk1a (ENSCSEG00000004181)	mettl21cb (ENSCSEG00000004190)	jam2b (ENSCSEG00000004200)	st6gal2a (ENSCSEG00000004208)	tmtops2b (ENSCSEG00000004215)	uxs1 (ENSCSEG00000004218)
Pinecone sodierfish	MODERN SPECIES	13	asb11 (ENSMMDG00005013557)	GRPR (ENSMMDG00005013573)	LANCL3 (ENSMMDG00005013575)	xk (ENSMMDG00005013576)	DYNLT3 (ENSMMDG00005013578)	SYTL5 (ENSMMDG00005013580)	srpx (ENSMMDG00005013583)	ENSMMDG00005013644	OTC (ENSMMDG00005013652)	gpr161b (ENSMMDG00005013662)	dcaf6 (ENSMMDG00005013680)	mpc2b (ENSMMDG00005014737)	rpl24 (ENSMMDG00005014741)	ENSMMDG00005014748	ENSMMDG00005014754	nxpe3 (ENSMMDG00005014755) ##22	me3 (ENSMMDG00005014802)	ildr1b (ENSMMDG00005017095)	ildr2 (ENSMMDG00005017097)	ENSMMDG00005017107	pou2f1b (ENSMMDG00005017116)	ENSMMDG00005017122	lamp1b (ENSMMDG00005017123)	grtp1b (ENSMMDG00005017125)	dcun1d2a (ENSMMDG00005017130)	tfdp1a (ENSMMDG00005017140)	grk1a (ENSMMDG00005017148)	mettl21cb (ENSMMDG00005017154)	jam2b (ENSMMDG00005017170)	ENSMMDG00005017176	tmtops2b (ENSMMDG00005017224)
Protacanthopterygii	DUPLICATION
Protacanthopterygii	DUPLICATION
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	86											ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.i.a.a ##22	ENSGT00950000183134.c.a.a	ENSGT00950000183058.A.b.a	ENSGT00950000183058.A.a.c	ENSGT00940000160248.a	ENSGT00950000182899.B.a.j	ENSGT00940000154927.c.b	ENSGT00940000157453.s	ENSGT00940000154652.p	ENSGT00940000159927.d.b	ENSGT00940000156596.d	ENSGT00940000166048.a.a	ENSGT00940000165208.b	ENSGT00940000158714.d.b	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157868
Salmoninae	ANCESTRAL SPECIES	729												ENSGT00950000182900.C.hb.a	ENSGT00510000047120.fb	ENSGT00950000183105.A.g.a	ENSGT00910000144283.c	ENSGT00950000182866.D.d.a.c.a.i.a.a ##22	ENSGT00950000183134.c.a.a.ab	ENSGT00950000183058.A.b.a.c	ENSGT00950000183058.A.a.c.c	ENSGT00940000160248.a	ENSGT00940000166391	ENSGT00940000160215
Huchen	MODERN SPECIES	1808									ENSHHUG00000012242	dcaf6 (ENSHHUG00000012190)	mpc2b (ENSHHUG00000012181)	rpl24 (ENSHHUG00000012179)	ENSHHUG00000012178	ENSHHUG00000012177	cep97 (ENSHHUG00000012175)	nxpe3 (ENSHHUG00000012172) ##22	me3 (ENSHHUG00000012009)	ildr1b (ENSHHUG00000011978)	ildr2 (ENSHHUG00000011969)	ENSHHUG00000011961	zgc:92313 (ENSHHUG00000011956)	mapk7 (ENSHHUG00000011944)
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000154517.mb.c	ENSGT00940000166292.a	ENSGT00940000166446.h	ENSGT00990000203619.A.a	ENSGT01060000248589.C.g.a.e	ENSGT00940000155600.a.b.b	ENSGT00940000160782	ENSGT00940000154443.e.d.b	ENSGT00940000153244.B.j	ENSGT00940000155375.m.a	ENSGT00390000001021.w.b	ENSGT00950000182900.C.hb.a	ENSGT00510000047120.fb	ENSGT00950000183105.A.g.a	ENSGT00910000144283.c	ENSGT00950000182866.D.d.a.c.a.i.a.a ##22	ENSGT00950000183134.c.a.a.ab	ENSGT00950000183058.A.b.a.c	ENSGT00950000183058.A.a.c.c	ENSGT00940000160248.a	ENSGT00940000166391	ENSGT00940000160215	ENSGT00940000157831.k.b	ENSGT00990000210160.a	ENSGT00950000182899.B.a.j.e	ENSGT00940000154927.c.b.c	ENSGT00940000157453.s.b	ENSGT00940000154652.p.b	ENSGT00940000159927.d.b	ENSGT00940000156596.d.h	ENSGT00940000166048.a.a
Salmo	ANCESTRAL SPECIES	15	ENSGT00940000166292.a	ENSGT00940000166446.g.b	ENSGT00940000163148.a.b.b.b.c.b	ENSGT00990000203619.A.a	ENSGT01060000248589.C.g.a.e	ENSGT00940000155600.a.b.b	ENSGT00940000160782	ENSGT00940000154443.e.d.b	ENSGT00940000153244.B.j.a	ENSGT00940000155375.m.a	ENSGT00390000001021.w.b	ENSGT00950000182900.C.hb.a	ENSGT00510000047120.fb	ENSGT00950000183105.A.g.a	ENSGT00910000144283.c	ENSGT00950000182866.D.d.a.c.a.i.a.a ##22	ENSGT00950000183134.c.a.a.ab	ENSGT00950000183058.A.b.a.c	ENSGT00950000183058.A.a.c.c	ENSGT00940000160248.a	ENSGT00940000166391	ENSGT00940000160215	ENSGT00940000157831.k.b	ENSGT00990000210160.a	ENSGT00950000182899.B.a.j.e	ENSGT00940000154927.c.b.c	ENSGT00940000157453.s.b	ENSGT00940000154652.p.b	ENSGT00940000159927.d.b	ENSGT00940000156596.d.h	ENSGT00940000166048.a.a
Atlantic salmon	MODERN SPECIES	17	ENSSSAG00000084846	ENSSSAG00000098461	GPR82 (ENSSSAG00000095557)	CASK (ENSSSAG00000079012)	nyx (ENSSSAG00000078957)	ddx3xa (ENSSSAG00000077710)	rpl8 (ENSSSAG00000077632)	usp9 (ENSSSAG00000072629)	MED14 (ENSSSAG00000071073)	ENSSSAG00000090382	ENSSSAG00000068515	brp44 (ENSSSAG00000068458)	RL24 (ENSSSAG00000068449)	ENSSSAG00000068454	ENSSSAG00000083675	NXPE3 (ENSSSAG00000068443) ##22	me3 (ENSSSAG00000068246)	ENSSSAG00000068226	ildr2 (ENSSSAG00000068222)	ENSSSAG00000102630	mapk7 (ENSSSAG00000068217)	pou2f1b (ENSSSAG00000067435)	LAMP1 (ENSSSAG00000067406)	grtp1b (ENSSSAG00000080740)	dcun1d2a (ENSSSAG00000067345)	tfdp1a (ENSSSAG00000067323)	ENSSSAG00000107290	mettl21cb (ENSSSAG00000067309)	ENSSSAG00000067304	st6gal2a (ENSSSAG00000118445)	tmtops2b (ENSSSAG00000067287)
River trout	MODERN SPECIES	16	mao (ENSSTUG00000007935)	ENSSTUG00000007877	ENSSTUG00000007872	GPR82 (ENSSTUG00000007852)	gpr34b (ENSSTUG00000007840)	CASK (ENSSTUG00000007300)	nyx (ENSSTUG00000007246)	ddx3xa (ENSSTUG00000006228)	rpl8 (ENSSTUG00000006146)	usp9 (ENSSTUG00000006104)	med14 (ENSSTUG00000004540)	dcaf6 (ENSSTUG00000017719)	mpc2b (ENSSTUG00000017644)	rpl24 (ENSSTUG00000017635)	ENSSTUG00000017627	nxpe3 (ENSSTUG00000017617) ##22	me3 (ENSSTUG00000013815)	ildr1b (ENSSTUG00000013728)	ildr2 (ENSSTUG00000013719)	ENSSTUG00000013708	zgc:92313 (ENSSTUG00000013703)	mapk7 (ENSSTUG00000013688)	pou2f1b (ENSSTUG00000013570)	ENSSTUG00000013564	lamp1b (ENSSTUG00000013558)	grtp1b (ENSSTUG00000013546)	tfdp1a (ENSSTUG00000013499)	grk1a (ENSSTUG00000013464)	mettl21cb (ENSSTUG00000013459)	ENSSTUG00000013447	ENSSTUG00000013435
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000154517.mb.c	ENSGT00940000166292.a	ENSGT00940000166446.h	ENSGT00990000203619.A.a	ENSGT01060000248589.C.g.a.e	ENSGT00940000155600.a.b.b	ENSGT00940000160782	ENSGT00940000154443.e.d.b	ENSGT00940000153244.B.j	ENSGT00940000155375.m.a	ENSGT00390000001021.w.b	ENSGT00950000182900.C.hb.a	ENSGT00510000047120.fb	ENSGT00950000183105.A.g.a	ENSGT00910000144283.c	ENSGT00950000182866.D.d.a.c.a.i.a.a ##22	ENSGT00950000183134.c.a.a.ab	ENSGT00950000183058.A.b.a.c	ENSGT00950000183058.A.a.c.c	ENSGT00940000160248.a	ENSGT00940000166391	ENSGT00940000160215	ENSGT00940000157831.k.b	ENSGT00990000210160.a	ENSGT00950000182899.B.a.j.e	ENSGT00940000154927.c.b.c	ENSGT00940000157453.s.b	ENSGT00940000154652.p.b	ENSGT00940000159927.d.b	ENSGT00940000156596.d.h	ENSGT00940000166048.a.a
Rainbow trout	MODERN SPECIES	21	mao (ENSOMYG00000026860)	ENSOMYG00000026752	ENSOMYG00000067004	ENSOMYG00000048090	GPR82 (ENSOMYG00000026725)	gpr34b (ENSOMYG00000062577)	CASK (ENSOMYG00000026669)	nyx (ENSOMYG00000026636)	ddx3xa (ENSOMYG00000025424)	usp9 (ENSOMYG00000022106)	MED14 (ENSOMYG00000021380)	ENSOMYG00000021145	ENSOMYG00000021086	RPL24 (ENSOMYG00000021073)	ENSOMYG00000021068	nxpe3 (ENSOMYG00000021060) ##22	me3 (ENSOMYG00000020180)	ildr1b (ENSOMYG00000020100)	ildr2 (ENSOMYG00000020093)	ENSOMYG00000055200	ENSOMYG00000068583	ENSOMYG00000020067	ENSOMYG00000019984	pou2f1b (ENSOMYG00000019924)	LAMP1 (ENSOMYG00000019910)	grtp1b (ENSOMYG00000019905)	ENSOMYG00000073539	dcun1d2a (ENSOMYG00000007359)	tfdp1a (ENSOMYG00000007329)	ENSOMYG00000007275	ENSOMYG00000062263
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000154517.mb.c	ENSGT00940000166292.a	ENSGT00940000166446.g.b	ENSGT00940000163149.a.a.b.c.a.a	ENSGT00990000203619.A.a	ENSGT00940000155600.a.b.b	ENSGT00940000160782	ENSGT00940000154443.e.d.b	ENSGT00940000153244.B.j	ENSGT00940000155375.m.a	ENSGT00390000001021.w.b	ENSGT00950000182900.C.hb.a	ENSGT00510000047120.fb	ENSGT00950000183105.A.g.a	ENSGT00910000144283.c	ENSGT00950000182866.D.d.a.c.a.i.a.a ##22	ENSGT00950000183134.c.a.a.ab	ENSGT00950000183058.A.b.a.c	ENSGT00950000183058.A.a.c.c	ENSGT00940000160248.a	ENSGT00940000166391	ENSGT00940000160215	ENSGT00940000157831.k.b	ENSGT00990000210160.a	ENSGT00950000182899.B.a.j.e	ENSGT00940000154927.c.b.c	ENSGT00940000157453.s.b	ENSGT00940000154652.p.b	ENSGT00940000159927.d.b	ENSGT00940000156596.d.h	ENSGT00940000166048.a.a
Coho salmon	MODERN SPECIES	11	ENSOKIG00005002634	mao (ENSOKIG00005002141)	ENSOKIG00005002014	GPR82 (ENSOKIG00005002004)	CASK (ENSOKIG00005001743)	nyx (ENSOKIG00005001701)	ddx3xa (ENSOKIG00005001534)	rpl8 (ENSOKIG00005001480)	ENSOKIG00005001472	usp9 (ENSOKIG00005000925)	MED14 (ENSOKIG00005000391)	ENSOKIG00005001699	mpc2b (ENSOKIG00005001657)	rpl24 (ENSOKIG00005001647)	cep97 (ENSOKIG00005001638)	NXPE3 (ENSOKIG00005001634) ##22	me3 (ENSOKIG00005001088)	ildr1b (ENSOKIG00005000895)	ildr2 (ENSOKIG00005000889)	ENSOKIG00005000882	zgc:92313 (ENSOKIG00005000880)	mapk7 (ENSOKIG00005000878)	pou2f1b (ENSOKIG00005000790)	ENSOKIG00005000733	LAMP1 (ENSOKIG00005000727)	grtp1b (ENSOKIG00005000722)	dcun1d2a (ENSOKIG00005000719)	tfdp1a (ENSOKIG00005000704)	GRK1 (ENSOKIG00005000685)	mettl21cb (ENSOKIG00005000680)	ENSOKIG00005000670
Chinook salmon	MODERN SPECIES	22	fundc1 (ENSOTSG00005032088)	ENSOTSG00005032086	mao (ENSOTSG00005032083)	ENSOTSG00005032082	GPR82 (ENSOTSG00005032081)	CASK (ENSOTSG00005027415)	nyx (ENSOTSG00005027395)	ddx3xa (ENSOTSG00005026829)	rpl8 (ENSOTSG00005026800)	usp9 (ENSOTSG00005015590)	med14 (ENSOTSG00005012755)	dcaf6 (ENSOTSG00005012742)	mpc2b (ENSOTSG00005012741)	rpl24 (ENSOTSG00005012739)	cep97 (ENSOTSG00005012738)	nxpe3 (ENSOTSG00005012737) ##22	me3 (ENSOTSG00005012200)	ildr1b (ENSOTSG00005012196)	ildr2 (ENSOTSG00005012195)	zgc:92313 (ENSOTSG00005012194)	mapk7 (ENSOTSG00005012193)	pou2f1b (ENSOTSG00005011577)	ENSOTSG00005011571	GRTP1 (ENSOTSG00005011569)	dcun1d2a (ENSOTSG00005011563)	tfdp1a (ENSOTSG00005011561)	grk1a (ENSOTSG00005011559)	mettl21cb (ENSOTSG00005011558)	ENSOTSG00005011557	st6gal2a (ENSOTSG00005011548)	tmtops2b (ENSOTSG00005011546)
Northern pike	MODERN SPECIES	15	ENSELUG00000021898	ENSELUG00000021805	SLA (ENSELUG00000029595)	tg (ENSELUG00000021727)	ccn4b (ENSELUG00000021470)	ndrg1b (ENSELUG00000021448)	PTP4A3 (ENSELUG00000021434)	dync1i1 (ENSELUG00000021407)	ZFAT (ENSELUG00000021358)	rbfa (ENSELUG00000021266)	gpr161b (ENSELUG00000021246)	dcaf6 (ENSELUG00000021232)	mpc2b (ENSELUG00000021166)	rpl24 (ENSELUG00000021155)	cep97 (ENSELUG00000021128)	nxpe3 (ENSELUG00000021085) ##22	me3 (ENSELUG00000021069)	ildr1b (ENSELUG00000021014)	ildr2 (ENSELUG00000020965)	ENSELUG00000020919	pou2f1b (ENSELUG00000020909)	lamp1b (ENSELUG00000020880)	grtp1b (ENSELUG00000020861)	dcun1d2a (ENSELUG00000020833)	tfdp1a (ENSELUG00000020821)	grk1a (ENSELUG00000020795)	mettl21cb (ENSELUG00000020773)	ENSELUG00000027736	jam2b (ENSELUG00000020711)	st6gal2a (ENSELUG00000020687)	tmtops2b (ENSELUG00000020674)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.a.b ##22
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	5	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b	ENSGT00940000160262.i	ENSGT01030000234583.a.a.c.a.a	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01050000244848.B.a.b.f.b.b	ENSGT01050000244848.B.b.e	ENSGT00940000161202	ENSGT00940000163576.k.b	ENSGT00950000183199.a.b.a.a ##31	ENSGT00950000183199.a.b.a.b.b.b ##31	ENSGT01100000263479.G.r	ENSGT00940000177666	ENSGT01100000263479.H.c.b.j.b.b	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.H.c.b.j.a	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a ##22	ENSGT00940000158852.c.b	ENSGT00940000166708	ENSGT00520000055635.c.b.b	ENSGT00940000162624	ENSGT00940000159960.d	ENSGT00940000157292.fc.b	ENSGT00940000160115.a.a.c	ENSGT00390000008714.b.f	ENSGT00940000153615.b.b	ENSGT00950000182805.a.a.b.a.c.a.c.b	ENSGT00390000005023.a.r	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00940000153675.a.a.a.a.b.l.a	ENSGT00940000166118	ENSGT00940000155088.b.a.b.i
Salmoninae_a	ANCESTRAL SPECIES	178												ENSGT01100000263479.G.q.b.b	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.H.c.b.j.b.b	ENSGT01100000263479.H.c.b.j.a	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a ##22	ENSGT00940000158852.c.b	ENSGT00940000166708	ENSGT00520000055635.c.b.b	ENSGT00940000162624.d	ENSGT00940000159960.d	ENSGT00940000157292.fc.b	ENSGT00940000160115.a.a.d	ENSGT00390000008714.b.e.a.b
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00980000198994	ENSGT00730000111056.g.d.b	ENSGT00940000154363.A.a	ENSGT00940000161180.m.b	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b	ENSGT00940000160262.i.d	ENSGT01030000234583.a.a.c.a.a.t.a	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01050000244848.B.a.b.f.b.b.c	ENSGT01050000244848.B.b.e	ENSGT01000000216948	ENSGT01100000263479.G.q.b.b	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.H.c.b.j.a	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a ##22	ENSGT00940000158852.c.b	ENSGT00940000166708.o.a	ENSGT00520000055635.c.b.b.i.a	ENSGT00940000162624.d	ENSGT00940000159960.d.c	ENSGT00940000157292.fc.b.f	ENSGT00940000160115.a.a.d	ENSGT00940000153675.a.a.a.a.b.l.a.a	ENSGT00940000166118.d	ENSGT00940000155088.b.a.b.i.a	ENSGT00940000159480.d.a.b	ENSGT00940000165886.h	ENSGT00950000183126.b.a.u.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.b.m.a
Oncorhynchus_a	ANCESTRAL SPECIES	97			ENSGT01100000263491.a.b.a.a.a.a.b.u.a.a.a.a	ENSGT00940000160262.j	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b	ENSGT00940000160262.i.d	ENSGT01030000234583.a.a.c.a.a.t.a	ENSGT01050000244848.B.a.b.f.b.a	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01050000244848.B.a.b.f.b.b.c	ENSGT01050000244848.B.b.e	ENSGT01000000216948	ENSGT01100000263479.G.q.b.b	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.H.c.b.j.a	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a ##22	ENSGT00940000158852.c.b	ENSGT00940000166708.o.a	ENSGT00520000055635.c.b.b.i.a	ENSGT00940000162624.d	ENSGT00940000159960.d.c	ENSGT00940000157292.fc.b.f	ENSGT00940000153675.a.a.a.a.b.l.a.a	ENSGT00940000166118.d	ENSGT00940000155088.b.a.b.i.a	ENSGT00940000159480.d.a.b	ENSGT00940000165886.h	ENSGT00950000183126.b.a.u.a.a	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.a.f
Chinook salmon	MODERN SPECIES	91							CXCR3 (ENSOTSG00005013837)	ENSOTSG00005013841	cxcr3.2 (ENSOTSG00005013842)	cnfn (ENSOTSG00005013843)	ENSOTSG00005013844	PAFAH1B3 (ENSOTSG00005013845) ##31	ENSOTSG00005013847	ENSOTSG00005013849	ENSOTSG00005013850	nxpe3 (ENSOTSG00005013856) ##22	GRIK5 (ENSOTSG00005013858)
Coho salmon	MODERN SPECIES	4	ENSOKIG00005015816	ENSOKIG00005015832	MEGF8 (ENSOKIG00005015858)	ENSOKIG00005015886	CXCR3 (ENSOKIG00005033655)	ENSOKIG00005033674	ENSOKIG00005033684	cxcr3.2 (ENSOKIG00005033710)	ENSOKIG00005033716	ENSOKIG00005033744	PAFAH1B3 (ENSOKIG00005033825) ##31	ENSOKIG00005033868	ENSOKIG00005033934	ENSOKIG00005033971	ENSOKIG00005034031	NXPE3 (ENSOKIG00005034072) ##22	GRIK5 (ENSOKIG00005034102)	znf574 (ENSOKIG00005034607)	gsk3ab (ENSOKIG00005034799)	ENSOKIG00005035080	ENSOKIG00005035103	ERF (ENSOKIG00005035279)	ENSOKIG00005035297	ENSOKIG00005035315	ENSOKIG00005035452	ENSOKIG00005035461	ENSOKIG00005035481	ENSOKIG00005035487	ENSOKIG00005035499	dedd1 (ENSOKIG00005035511)	ENSOKIG00005035530
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000070124	ENSOMYG00000026951	ENSOMYG00000026938	ENSOMYG00000026910	ENSOMYG00000026881	ENSOMYG00000037793	ENSOMYG00000026870	ENSOMYG00000026681	ENSOMYG00000026605 ##31	ENSOMYG00000026578	ENSOMYG00000026530	ENSOMYG00000076740	ENSOMYG00000058079	ENSOMYG00000026459	ENSOMYG00000026425	ENSOMYG00000026406 ##22	ENSOMYG00000026399	znf574 (ENSOMYG00000000329)	GSK3A (ENSOMYG00000000426)	ENSOMYG00000000232	ENSOMYG00000000215	ENSOMYG00000047948	ENSOMYG00000026370	ENSOMYG00000026376	ENSOMYG00000063403	dedd1 (ENSOMYG00000026332)	ENSOMYG00000072501	ENSOMYG00000026297	ENSOMYG00000026293	ENSOMYG00000069662	ENSOMYG00000056821
Salmo	ANCESTRAL SPECIES	57	ENSGT00940000161180.m.b	ENSGT00940000157292.gc	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b	ENSGT00940000160262.i.b	ENSGT01030000234583.a.a.c.a.a	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01050000244848.B.a.b.f.b.b	ENSGT01050000244848.B.b.e	ENSGT00940000161202	ENSGT00940000163576.k.b	ENSGT00950000183199.a.b.a.a ##31	ENSGT00940000167162	ENSGT01100000263479.H.c.a.a.a.b	ENSGT01100000263479.H.c.b.j.a	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a ##22	ENSGT00940000158852.c.b	ENSGT00940000166708.q.a	ENSGT00520000055635.c.b.b.g	ENSGT00940000162624.d	ENSGT00940000159960.d.b	ENSGT00940000157292.fc.b.c	ENSGT00940000160115.a.a.d	ENSGT00390000008714.b.e.a.b	ENSGT00980000198710.e.b.a.a.b.b.b	ENSGT00940000153615.b.b	ENSGT00950000182805.a.a.b.a.c.a.c.b	ENSGT00390000005023.a.r	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00940000166118.f	ENSGT00940000155088.b.a.b.j.a.b
River trout	MODERN SPECIES	22	ENSSTUG00000031879	MEGF8 (ENSSTUG00000031908)	trim35-28 (ENSSTUG00000031960)	CXCR3 (ENSSTUG00000031982)	ENSSTUG00000032004	cxcr3.2 (ENSSTUG00000032022)	cnfn (ENSSTUG00000032051)	tlr21 (ENSSTUG00000032061)	PAFAH1B3 (ENSSTUG00000032070) ##31	ENSSTUG00000032134	PAFAH1B3 (ENSSTUG00000032462) ##31	ENSSTUG00000032487	ENSSTUG00000032595	ENSSTUG00000032610	ENSSTUG00000032623	nxpe3 (ENSSTUG00000032643) ##22	GRIK5 (ENSSTUG00000032667)	znf574 (ENSSTUG00000032963)	gsk3ab (ENSSTUG00000032976)	ZNF526 (ENSSTUG00000033070)	ENSSTUG00000033082	ENSSTUG00000033114	dedd1 (ENSSTUG00000033194)	ENSSTUG00000033218	ENSSTUG00000033224	ENSSTUG00000033229	ENSSTUG00000033239	ENSSTUG00000033252	ino80c (ENSSTUG00000033257)	ENSSTUG00000033275	DYNC1LI1 (ENSSTUG00000033334)
Atlantic salmon	MODERN SPECIES	24	cxcr3.2 (ENSSSAG00000051147)	ENSSSAG00000112786	cnfn (ENSSSAG00000051162)	ENSSSAG00000121032 ##31	tlr21 (ENSSSAG00000108488)	ceacam1 (ENSSSAG00000095405)	ENSSSAG00000097201 ##31	ENSSSAG00000097508	ENSSSAG00000051209 ##31	ENSSSAG00000112140	ENSSSAG00000094063	ENSSSAG00000051243 ##31	ENSSSAG00000051303	ENSSSAG00000003818	ENSSSAG00000051309	ENSSSAG00000110201 ##22	ENSSSAG00000051319	ENSSSAG00000003798	ENSSSAG00000057062	znf574 (ENSSSAG00000003807)	gsk3ab (ENSSSAG00000058347)	ZNF526 (ENSSSAG00000114243)	ENSSSAG00000107687	ENSSSAG00000059116	ENSSSAG00000115246	ENSSSAG00000097009	dedd1 (ENSSSAG00000059305)	ENSSSAG00000087244	ENSSSAG00000114829	ENSSSAG00000003430	ENSSSAG00000100792
Huchen	MODERN SPECIES	1242					ENSHHUG00000019759	ENSHHUG00000019637	ENSHHUG00000019583	ENSHHUG00000019571	ENSHHUG00000019567	ENSHHUG00000019541	ENSHHUG00000019539	ENSHHUG00000019530	ENSHHUG00000019519	ENSHHUG00000019512	ENSHHUG00000019507	nxpe3 (ENSHHUG00000019502) ##22	GRIK5 (ENSHHUG00000019304)
Salmoninae	ANCESTRAL SPECIES	1229														ENSGT01100000263479.H.c.b.i.a.b	ENSGT01100000263956	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.b ##22	ENSGT00940000158852.c.a
Huchen	MODERN SPECIES	3678														ENSHHUG00000025344	ENSHHUG00000025336	ENSHHUG00000025334 ##22	GRIK5 (ENSHHUG00000025261)
Salmoninae_a	ANCESTRAL SPECIES	204									ENSGT01050000244848.B.a.b.f.a.a	ENSGT01050000244848.B.a.b.f.b.a	ENSGT01050000244848.B.b.f	ENSGT00940000163576.l	ENSGT00950000183199.a.b.b ##31	ENSGT01100000263479.H.c.b.i.a.b	ENSGT01100000263956	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.b ##22	ENSGT00940000158852.c.a
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.b ##22
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000001988	slc1a1 (ENSOMYG00000002082)	ENSOMYG00000002116	ENSOMYG00000002125	ENSOMYG00000002143	ENSOMYG00000065315	hacd4 (ENSOMYG00000002160)	ENSOMYG00000002377	mllt3 (ENSOMYG00000002515)	H2AZ1 (ENSOMYG00000002472)	DDIT4L (ENSOMYG00000002531)	ENSOMYG00000054779	PPP3CA (ENSOMYG00000002701)	ENSOMYG00000074496	BANK1 (ENSOMYG00000002844)	ENSOMYG00000002928 ##22	ENSOMYG00000003066	ENSOMYG00000068849	ENSOMYG00000003148	ENSOMYG00000003535	ENSOMYG00000004585	ENSOMYG00000004846	ENSOMYG00000004920	ENSOMYG00000004987	ENSOMYG00000005011	ENSOMYG00000005060	ENSOMYG00000005083	ENSOMYG00000005128	coro1b (ENSOMYG00000005186)	ENSOMYG00000005250	msantd1 (ENSOMYG00000005334)
Salmo	ANCESTRAL SPECIES	77	ENSGT00940000160262.i.a	ENSGT00970000193390.c.b.b.b.a.v	ENSGT01050000244848.B.a.b.f.a.a	ENSGT01050000244848.B.a.b.f.b.a	ENSGT01050000244848.B.b.f	ENSGT00940000163576.k.a	ENSGT00950000183199.a.b.b ##31	ENSGT01100000263479.G.q.a	ENSGT01100000263479.H.c.a.a.a.a.a	ENSGT01100000263479.H.c.b.i.a.a	ENSGT01100000263479.H.c.a.a.a.a.b	ENSGT00940000154614.ke.b	ENSGT00950000183199.a.b.a.b.b.a ##31	ENSGT01100000263479.H.c.b.i.a.b	ENSGT01100000263956	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.b ##22	ENSGT00940000158852.c.a	ENSGT00940000166708.q.b	ENSGT00520000055635.c.b.b.h	ENSGT00940000162624.c	ENSGT00940000159960.d.a	ENSGT00940000157292.fc.b.d	ENSGT00940000160115.a.a.c.a.a	ENSGT00390000008714.b.e.a.a	ENSGT00940000159480.c.a	ENSGT00940000165886.g	ENSGT00950000183126.b.a.u.a	ENSGT00950000183084.b.a.a.b	ENSGT00940000157473.b.b.m.a.b	ENSGT00940000157473.b.b.m.b.a	ENSGT00950000183084.b.a.a.a.d
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000057399 ##31	ENSSSAG00000092134	ENSSSAG00000057337	ENSSSAG00000104670	ENSSSAG00000114240	ENSSSAG00000057331 ##22	ENSSSAG00000082131	ENSSSAG00000111321	ENSSSAG00000112024	ENSSSAG00000057280	ENSSSAG00000083894	ENSSSAG00000114015	ENSSSAG00000039240	ENSSSAG00000086972	ENSSSAG00000121983	ENSSSAG00000084182 ##22	ENSSSAG00000102265	znf574 (ENSSSAG00000096417)	gsk3ab (ENSSSAG00000092306)	ENSSSAG00000059107	ENSSSAG00000107403	ENSSSAG00000091877	ENSSSAG00000087967	ENSSSAG00000083743	ENSSSAG00000059145	dedd2 (ENSSSAG00000003442)	ENSSSAG00000099931	ENSSSAG00000059350	ENSSSAG00000059358	ENSSSAG00000116781	ENSSSAG00000110649
River trout	MODERN SPECIES	30	ENSSTUG00000039556	ENSSTUG00000039553	ENSSTUG00000039526	ENSSTUG00000039514	cxcr3.2 (ENSSTUG00000039481)	PAFAH1B3 (ENSSTUG00000039237) ##31	PAFAH1B3 (ENSSTUG00000039161) ##31	ENSSTUG00000039146	ENSSTUG00000039144	ENSSTUG00000038942	ENSSTUG00000038910	ENSSTUG00000038897	ENSSTUG00000038837	ENSSTUG00000038750	ENSSTUG00000038734	ENSSTUG00000038725 ##22	ENSSTUG00000038708	ENSSTUG00000038699	GRIK5 (ENSSTUG00000038580)	znf574 (ENSSTUG00000038565)	gsk3ab (ENSSTUG00000038504)	ZNF526 (ENSSTUG00000038472)	ENSSTUG00000038409	ENSSTUG00000038289	POU2F2 (ENSSTUG00000038251)	dedd1 (ENSSTUG00000038183)	ENSSTUG00000038171	ENSSTUG00000038158	ENSSTUG00000038150	ENSSTUG00000038148	ENO2 (ENSSTUG00000038009)
Salmoninae	ANCESTRAL SPECIES	159	ENSGT00390000012242.b.a	ENSGT00510000046787.e.a.h	ENSGT00940000182397.b	ENSGT00510000046787.e.a.g	ENSGT00940000182397.a	ENSGT00990000208074	ENSGT00400000023138	ENSGT00390000005736	ENSGT00950000183054.a.a.a.b.a	ENSGT00950000183027.b.a.b	ENSGT00940000156337.d.f	ENSGT00800000124172.j.b	ENSGT00940000157483.e	ENSGT00940000158285.e	ENSGT00730000111184	ENSGT00950000182866.D.d.a.c.a.i.a.b.b ##22	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000010356	ENSGT00940000154622.a.a	ENSGT00940000160388.a	ENSGT00940000154508.a.a.s.a.c	ENSGT00940000153232.a.b.a.f	ENSGT00520000055589.d.a.b.e	ENSGT00940000165411.b	ENSGT00940000160388.b	ENSGT00940000154508.a.a.s.a.d	ENSGT00390000003901	ENSGT00940000153232.a.b.a.e	ENSGT00520000055589.d.a.b.f	ENSGT00940000155800.a.b.d.a
Salmoninae_a	ANCESTRAL SPECIES	54	ENSGT00390000000973.a.b.h.a	ENSGT00510000046908.a.b.b	ENSGT00390000012242.b.a.c	ENSGT00510000046787.e.a.g	ENSGT00940000182397.a	ENSGT00990000208074.c.b	ENSGT00400000023138.a	ENSGT00390000005736	ENSGT00950000183054.a.a.a.b.a	ENSGT00950000183027.b.a.b	ENSGT00940000156337.d.e.b	ENSGT00800000124172.j.b	ENSGT00940000157483.e	ENSGT00940000158285.e	ENSGT00730000111184	ENSGT00950000182866.D.d.a.c.a.i.a.b.b ##22	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000010356	ENSGT00940000154622.a.a.r	ENSGT00940000165411.b	ENSGT00940000160388.b	ENSGT00940000154508.a.a.s.a.d	ENSGT00390000003901	ENSGT00940000153232.a.b.a.e	ENSGT00520000055589.d.a.b.f	ENSGT00730000111690.B.g.c	ENSGT00520000055649.a.a	ENSGT00390000015948.a.e	ENSGT00390000017452.b	ENSGT00940000160184.c.b.b
Oncorhynchus	ANCESTRAL SPECIES	52	ENSGT00510000046908.a.b.b	ENSGT00940000164052.a	ENSGT00390000012242.b.a.c	ENSGT00510000046787.e.a.g	ENSGT00940000182397.a	ENSGT00990000208074.c.b	ENSGT00400000023138.a	ENSGT00390000005736	ENSGT00950000183054.a.a.a.b.a	ENSGT00950000183027.b.a.b	ENSGT00940000156337.d.e.b	ENSGT00800000124172.j.b	ENSGT00940000157483.e	ENSGT00940000158285.e	ENSGT00730000111184	ENSGT00950000182866.D.d.a.c.a.i.a.b.b ##22	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000010356	ENSGT00940000154622.a.a.r	ENSGT00940000165411.b	ENSGT00940000160388.b	ENSGT00940000154508.a.a.s.a.d.b	ENSGT00390000003901	ENSGT00940000153232.a.b.a.e	ENSGT00940000154508.a.a.s.a.d.a.a	ENSGT00520000055589.d.a.b.f	ENSGT00940000155800.a.b.d.b	ENSGT00940000162224	ENSGT00390000015958.c	ENSGT00940000157294.c
Oncorhynchus_a	ANCESTRAL SPECIES	52	ENSGT00390000000973.a.b.h.a	ENSGT00510000046908.a.b.b	ENSGT00390000012242.b.a.c	ENSGT00510000046787.e.a.g	ENSGT00940000182397.a	ENSGT00990000208074.c.b	ENSGT00400000023138.a	ENSGT00390000005736	ENSGT00950000183054.a.a.a.b.a	ENSGT00950000183027.b.a.b	ENSGT00940000156337.d.e.b	ENSGT00800000124172.j.b	ENSGT00940000157483.e	ENSGT00940000158285.e	ENSGT00730000111184	ENSGT00950000182866.D.d.a.c.a.i.a.b.b ##22	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000010356	ENSGT00940000154622.a.a.r	ENSGT00940000165411.b	ENSGT00940000160388.b	ENSGT00940000154508.a.a.s.a.d.b	ENSGT00390000003901	ENSGT00940000153232.a.b.a.e	ENSGT00940000154508.a.a.s.a.d.a.a	ENSGT00520000055589.d.a.b.f	ENSGT00940000155800.a.b.d.b	ENSGT00940000162224	ENSGT00390000015958.c	ENSGT00940000157294.c
Coho salmon	MODERN SPECIES	3	ENSOKIG00005018480	CGA (ENSOKIG00005018462)	ENSOKIG00005018452	ENSOKIG00005018444	ENSOKIG00005028088	ENSOKIG00005028081	ENSOKIG00005028056	SYNPO2 (ENSOKIG00005027993)	myoz2b (ENSOKIG00005027977)	USP53 (ENSOKIG00005027954)	fabp2 (ENSOKIG00005027933)	gucy1b1 (ENSOKIG00005027780)	gucy1a1 (ENSOKIG00005027757)	map9 (ENSOKIG00005027737)	ENSOKIG00005027726	NXPE3 (ENSOKIG00005027715) ##22	ufsp2 (ENSOKIG00005027584)	ankrd37 (ENSOKIG00005027570)	cfap97 (ENSOKIG00005027563)	slc25a4 (ENSOKIG00005027537)	ENSOKIG00005027502	helt (ENSOKIG00005027479)	acsl1a (ENSOKIG00005026721)	casp3a (ENSOKIG00005026644)	STOX2 (ENSOKIG00005026616)	DHX15 (ENSOKIG00005026440)	SOD3 (ENSOKIG00005026417)	ccdc149b (ENSOKIG00005026389)	lgi2b (ENSOKIG00005026320)	C4orf54 (ENSOKIG00005026267)	mttp (ENSOKIG00005024462)
Chinook salmon	MODERN SPECIES	27	arfip1 (ENSOTSG00005019183)	FAM193A (ENSOTSG00005018985)	TNIP2 (ENSOTSG00005018984)	CGA (ENSOTSG00005018982)	sparcl1 (ENSOTSG00005018508)	scpp9 (ENSOTSG00005018502)	ENSOTSG00005018499	scpp5 (ENSOTSG00005018483)	SYNPO2 (ENSOTSG00005018471)	myoz2b (ENSOTSG00005018465)	USP53 (ENSOTSG00005018458)	fabp2 (ENSOTSG00005018455)	gucy1b1 (ENSOTSG00005018361)	gucy1a1 (ENSOTSG00005018356)	map9 (ENSOTSG00005018353)	nxpe3 (ENSOTSG00005018349) ##22	ufsp2 (ENSOTSG00005018344)	ankrd37 (ENSOTSG00005018341)	ENSOTSG00005018339	slc25a4 (ENSOTSG00005018337)	helt (ENSOTSG00005018333)	acsl1a (ENSOTSG00005009943)	primpol (ENSOTSG00005009908)	casp3a (ENSOTSG00005009907)	STOX2 (ENSOTSG00005009906)	dhx15 (ENSOTSG00005009728)	SOD3 (ENSOTSG00005009726)	ENSOTSG00005009725	ccdc149b (ENSOTSG00005009656)	lgi2b (ENSOTSG00005009655)	C4orf54 (ENSOTSG00005009654)
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000063427	ENSOMYG00000003368	ENSOMYG00000070271	ENSOMYG00000003226	SYNPO2 (ENSOMYG00000041187)	ENSOMYG00000071716	myoz2b (ENSOMYG00000041179)	USP53 (ENSOMYG00000041173)	ENSOMYG00000075813	fabp2 (ENSOMYG00000041163)	ENSOMYG00000063280	gucy1b1 (ENSOMYG00000041152)	gucy1a1 (ENSOMYG00000041145)	map9 (ENSOMYG00000041140)	ENSOMYG00000050587	ENSOMYG00000041137 ##22	ufsp2 (ENSOMYG00000041122)	ankrd37 (ENSOMYG00000041104)	cfap97 (ENSOMYG00000041084)	slc25a4 (ENSOMYG00000041078)	ENSOMYG00000041074	helt (ENSOMYG00000041072)	acsl1a (ENSOMYG00000033197)	ENSOMYG00000032208	ENSOMYG00000032187	DHX15 (ENSOMYG00000032089)	SOD3 (ENSOMYG00000032164)	CCDC149 (ENSOMYG00000032030)	LGI2 (ENSOMYG00000031986)	ENSOMYG00000031930	ENSOMYG00000054828
Salmo	ANCESTRAL SPECIES	59	ENSGT00390000000973.a.b.h.a	ENSGT00510000046908.a.b.b	ENSGT00390000012242.b.a.c	ENSGT00510000046787.e.a.g	ENSGT00940000182397.a	ENSGT00990000208074.c.b	ENSGT00400000023138.a	ENSGT00390000005736	ENSGT00950000183054.a.a.a.b.a	ENSGT00950000183027.b.a.b	ENSGT00940000156337.d.f	ENSGT00800000124172.j.b	ENSGT00940000157483.e	ENSGT00940000158285.e	ENSGT00730000111184	ENSGT00950000182866.D.d.a.c.a.i.a.b.b ##22	ENSGT00940000157115	ENSGT00940000154216.b	ENSGT00390000010356	ENSGT00940000154622.a.a.r	ENSGT00940000165411.b	ENSGT00940000160388.b	ENSGT00940000154508.a.a.s.a.d	ENSGT00390000003901	ENSGT00940000153232.a.b.a.e	ENSGT00520000055589.d.a.b.f	ENSGT00940000155800.a.b.d.a	ENSGT00940000162224	ENSGT00390000015958.c	ENSGT00940000157294.c	ENSGT00730000111645.b.a
River trout	MODERN SPECIES	33	FHDC1 (ENSSTUG00000018000)	arfip1 (ENSSTUG00000018024)	FAM193A (ENSSTUG00000018064)	ENSSTUG00000018340	CGA (ENSSTUG00000018376)	sparcl1 (ENSSTUG00000018389)	ENSSTUG00000018407	SYNPO2 (ENSSTUG00000018412)	myoz2b (ENSSTUG00000018459)	ENSSTUG00000018474	fabp2 (ENSSTUG00000018492)	gucy1b1 (ENSSTUG00000018498)	gucy1a1 (ENSSTUG00000018547)	map9 (ENSSTUG00000018554)	ENSSTUG00000018587	nxpe3 (ENSSTUG00000018605) ##22	ufsp2 (ENSSTUG00000018625)	ankrd37 (ENSSTUG00000018841)	cfap97 (ENSSTUG00000018844)	slc25a4 (ENSSTUG00000018852)	helt (ENSSTUG00000018870)	acsl1a (ENSSTUG00000018889)	STOX2 (ENSSTUG00000019784)	casp3a (ENSSTUG00000019813)	dhx15 (ENSSTUG00000019852)	SOD3 (ENSSTUG00000020624)	CCDC149 (ENSSTUG00000020634)	lgi2b (ENSSTUG00000020742)	C4orf54 (ENSSTUG00000021705)	mttp (ENSSTUG00000021829)	ENSSTUG00000023319
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000005348	TNIP2 (ENSSSAG00000005559)	ENSSSAG00000005565	ENSSSAG00000005576	ENSSSAG00000005598	scpp9 (ENSSSAG00000005609)	ENSSSAG00000086248	scpp5 (ENSSSAG00000098895)	scpp5 (ENSSSAG00000005671)	scpp5 (ENSSSAG00000005652)	ENSSSAG00000005679	MYOZ2 (ENSSSAG00000005695)	gucy1b1 (ENSSSAG00000005775)	ENSSSAG00000005859	map9 (ENSSSAG00000005872)	ENSSSAG00000005880 ##22	ufsp2 (ENSSSAG00000005892)	ankrd37 (ENSSSAG00000120002)	cfap97 (ENSSSAG00000005936)	slc25a4 (ENSSSAG00000005953)	ENSSSAG00000005978	helt (ENSSSAG00000005991)	acsl1a (ENSSSAG00000006503)	PRIMPOL (ENSSSAG00000041666)	CASP3 (ENSSSAG00000041689)	ENSSSAG00000109184	ENSSSAG00000041721	DHX15 (ENSSSAG00000041774)	sod3 (ENSSSAG00000103400)	CCDC149 (ENSSSAG00000043249)	LGI2 (ENSSSAG00000043307)
Huchen	MODERN SPECIES	1486																nxpe3 (ENSHHUG00000052152) ##22	ufsp2 (ENSHHUG00000052155)	ankrd37 (ENSHHUG00000052157)	ENSHHUG00000052159	cfap97 (ENSHHUG00000052161)	slc25a4 (ENSHHUG00000052164)	helt (ENSHHUG00000052186)	acsl1a (ENSHHUG00000031023)	primpol (ENSHHUG00000031232)	casp3a (ENSHHUG00000031246)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b ##22
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b.a.a ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b.a.a ##22
Salmo	ANCESTRAL SPECIES	49	ENSGT00940000158215.p	ENSGT00940000155429.a.a.b	ENSGT00940000161376	ENSGT00390000014293.a.c	ENSGT00940000154641.B.b.l	ENSGT00940000155397.a.b.h	ENSGT00530000063821.b.b	ENSGT00530000063169.a.r	ENSGT00940000165285.f	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.a.a.a.b.a.a	ENSGT00730000111645.a.d	ENSGT00940000155903.g.b	ENSGT00900000140979.a.a	ENSGT00530000063652.a.a.b	ENSGT00940000156306.d	ENSGT00950000182866.D.d.a.c.a.i.b.a.a ##22	ENSGT00950000182916.a.b.a.b.v	ENSGT00940000158006.a	ENSGT00550000074944.k	ENSGT00940000157772.c	ENSGT00940000153289.a.a.b.c	ENSGT00940000165054.B	ENSGT00940000155800.b	ENSGT00950000183137.b.a.i	ENSGT00940000157235.l	ENSGT00940000158985.e.a.a	ENSGT00950000182924.A.b.a.b.h	ENSGT00950000183054.a.a.a.a.h	ENSGT00950000183027.b.b.e	ENSGT00940000156337.c.g	ENSGT00940000153617.B.h
River trout	DUPLICATION
River trout	MODERN SPECIES	38	haus6 (ENSSTUG00000032605)	ENSSTUG00000032676	tspan5a (ENSSTUG00000034007)	RAP1GDS1 (ENSSTUG00000034176)	ENSSTUG00000034727	slc1a1 (ENSSTUG00000034771)	spata6l (ENSSTUG00000034943)	trmt10a (ENSSTUG00000034961)	ENSSTUG00000035066	ENSSTUG00000035076	ENSSTUG00000035116	mllt3 (ENSSTUG00000035120)	H2AZ1 (ENSSTUG00000035152)	DDIT4L (ENSSTUG00000035157)	PPP3CA (ENSSTUG00000035269)	nxpe3 (ENSSTUG00000040174) ##22	ENSSTUG00000040188 ##22	ENSSTUG00000040201	zdhhc21 (ENSSTUG00000040206)	plaa (ENSSTUG00000040217)	ACO1 (ENSSTUG00000040449)	ENSSTUG00000040588	ACER2 (ENSSTUG00000040611)	ENSSTUG00000040665	ENSSTUG00000040820	ENSSTUG00000040837	PPARGC1A (ENSSTUG00000040880)	ADGRA3 (ENSSTUG00000040967)	KCNIP4 (ENSSTUG00000041209)	ENSSTUG00000041307	sec24d (ENSSTUG00000041379)
River trout	MODERN SPECIES	38	ENSSTUG00000032676	tspan5a (ENSSTUG00000034007)	RAP1GDS1 (ENSSTUG00000034176)	ENSSTUG00000034727	slc1a1 (ENSSTUG00000034771)	spata6l (ENSSTUG00000034943)	trmt10a (ENSSTUG00000034961)	ENSSTUG00000035066	ENSSTUG00000035076	ENSSTUG00000035116	mllt3 (ENSSTUG00000035120)	H2AZ1 (ENSSTUG00000035152)	DDIT4L (ENSSTUG00000035157)	PPP3CA (ENSSTUG00000035269)	nxpe3 (ENSSTUG00000040174) ##22	ENSSTUG00000040188 ##22	ENSSTUG00000040201	zdhhc21 (ENSSTUG00000040206)	plaa (ENSSTUG00000040217)	ACO1 (ENSSTUG00000040449)	ENSSTUG00000040588	ACER2 (ENSSTUG00000040611)	ENSSTUG00000040665	ENSSTUG00000040820	ENSSTUG00000040837	PPARGC1A (ENSSTUG00000040880)	ADGRA3 (ENSSTUG00000040967)	KCNIP4 (ENSSTUG00000041209)	ENSSTUG00000041307	sec24d (ENSSTUG00000041379)	SYNPO2 (ENSSTUG00000043865)
Atlantic salmon	MODERN SPECIES	26	fa29a (ENSSSAG00000005878)	ENSSSAG00000006377	ENSSSAG00000030907	ENSSSAG00000033777	ENSSSAG00000036477	slc1a1 (ENSSSAG00000037401)	ENSSSAG00000085280	spata6l (ENSSSAG00000039413)	ENSSSAG00000120143	ENSSSAG00000090565	ENSSSAG00000110195	ENSSSAG00000039827	H2AZ1 (ENSSSAG00000039934)	Ddit4l (ENSSSAG00000039999)	PPP3CA (ENSSSAG00000040278)	ENSSSAG00000057570 ##22	ENSSSAG00000057685	ENSSSAG00000062965	ENSSSAG00000062983	ENSSSAG00000063203	ENSSSAG00000086352	cj011 (ENSSSAG00000063292)	ENSSSAG00000097570	ENSSSAG00000096793	ENSSSAG00000091906	ENSSSAG00000063308	ENSSSAG00000106996	PPARGC1A (ENSSSAG00000063349)	ENSSSAG00000063507	KCNIP4 (ENSSSAG00000092519)	sec24d (ENSSSAG00000002760)
Salmoninae	ANCESTRAL SPECIES	1994																ENSGT00950000182866.D.d.a.c.a.i.b.a.b ##22	ENSGT00950000182916.a.b.a.b.u.b
Salmoninae_a	ANCESTRAL SPECIES	34	ENSGT00940000157772.d	ENSGT00940000156990	ENSGT00990000204039	ENSGT00940000155429.a.a.a	ENSGT00390000014293.a.d	ENSGT00940000155397.a.b.g	ENSGT00990000214324	ENSGT00530000063169.a.q	ENSGT00730000111645.a.c	ENSGT00530000062962.b.b	ENSGT00390000004438	ENSGT00940000155903.g.a	ENSGT00530000063652.a.a.a	ENSGT00940000156306.c	ENSGT00390000008787.a	ENSGT00950000182866.D.d.a.c.a.i.b.a.b ##22	ENSGT00950000182916.a.b.a.b.u.b	ENSGT00940000158006.b	ENSGT00550000074944.l	ENSGT00940000158215.o	ENSGT00390000008250.g	ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b	ENSGT00940000154308.A.b.a.a.b	ENSGT00950000182920.b.a.b.a.a.g	ENSGT00390000007252.c.e	ENSGT00940000154949.b.ib	ENSGT00940000159031.y.a	ENSGT00940000157122.b.a.e	ENSGT00390000002245.h	ENSGT00940000164407.a.b.a.a	ENSGT00940000159778.a.d
Salmo	ANCESTRAL SPECIES	18	ENSGT00940000157772.d	ENSGT00940000156990	ENSGT00990000204039	ENSGT00940000155429.a.a.a	ENSGT00390000014293.a.d	ENSGT00940000155397.a.b.g	ENSGT00990000214324	ENSGT00530000063169.a.q	ENSGT00730000111645.a.c	ENSGT00530000062962.b.b	ENSGT00390000004438	ENSGT00940000155903.g.a	ENSGT00530000063652.a.a.a	ENSGT00940000156306.c	ENSGT00390000008787.a	ENSGT00950000182866.D.d.a.c.a.i.b.a.b ##22	ENSGT00950000182916.a.b.a.b.u.b	ENSGT00940000158006.b	ENSGT00550000074944.l	ENSGT00940000158215.o	ENSGT00390000008250.g	ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b	ENSGT00940000154308.A.b.a.a.b	ENSGT00950000182920.b.a.b.a.a.g	ENSGT00390000007252.c.e	ENSGT00940000154949.b.ib	ENSGT00940000159031.y.a	ENSGT00940000157122.b.a.e	ENSGT00390000002245.h	ENSGT00940000164407.a.b.a.a	ENSGT00940000159778.a.d
River trout	MODERN SPECIES	35	frem1a (ENSSTUG00000001292)	ENSSTUG00000001247	tspan5a (ENSSTUG00000001228)	RAP1GDS1 (ENSSTUG00000001109)	slc1a1 (ENSSTUG00000000964)	ENSSTUG00000000935	trmt10a (ENSSTUG00000000926)	C4orf54 (ENSSTUG00000000922)	hacd4 (ENSSTUG00000000918)	ENSSTUG00000000738	mllt3 (ENSSTUG00000000674)	H2AZ1 (ENSSTUG00000000660)	DDIT4L (ENSSTUG00000000652)	PPP3CA (ENSSTUG00000000534)	BANK1 (ENSSTUG00000000506)	nxpe3 (ENSSTUG00000000503) ##22	NFIB (ENSSTUG00000048474)	zdhhc21 (ENSSTUG00000048446)	plaa (ENSSTUG00000048239)	ENSSTUG00000048220	DENND4C (ENSSTUG00000048007)	haus6 (ENSSTUG00000047949)	ENSSTUG00000047944	ENSSTUG00000047936	plin2 (ENSSTUG00000047926)	ENSSTUG00000047917	ENSSTUG00000047914	ENSSTUG00000047900	coro1b (ENSSTUG00000047886)	dtx4a (ENSSTUG00000047860)	msantd1 (ENSSTUG00000047851)
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000116401	ENSSSAG00000065377	tspan5a (ENSSSAG00000065056)	ENSSSAG00000064079	slc1a1 (ENSSSAG00000063951)	ENSSSAG00000063943	ENSSSAG00000082168	ENSSSAG00000082763	hacd4 (ENSSSAG00000063895)	focad (ENSSSAG00000057702)	mllt3 (ENSSSAG00000057529)	H2AZ1 (ENSSSAG00000057486)	ddit4l (ENSSSAG00000057471)	PPP3CA (ENSSSAG00000056867)	ENSSSAG00000056830	ENSSSAG00000095391 ##22	ENSSSAG00000084865	ENSSSAG00000054032	ENSSSAG00000096600	ENSSSAG00000053975	ENSSSAG00000053876	ENSSSAG00000053848	ENSSSAG00000041291	ENSSSAG00000040980	ENSSSAG00000092513	ENSSSAG00000115764	ENSSSAG00000040797	ENSSSAG00000040700	ENSSSAG00000040771	ENSSSAG00000040648	ENSSSAG00000040622
Oncorhynchus	ANCESTRAL SPECIES	31	ENSGT00940000156990	ENSGT00990000204039	ENSGT00940000155429.a.a.a	ENSGT00940000161376	ENSGT00390000014293.a.d	ENSGT00940000155397.a.b.g	ENSGT00990000214324	ENSGT00530000063169.a.q	ENSGT00730000111645.a.c	ENSGT00530000062962.b.b	ENSGT00390000004438	ENSGT00940000155903.g.a	ENSGT00530000063652.a.a.a	ENSGT00940000156306.c	ENSGT00390000008787.a	ENSGT00950000182866.D.d.a.c.a.i.b.a.b ##22	ENSGT00950000182916.a.b.a.b.u.b	ENSGT00940000158006.b	ENSGT00550000074944.l	ENSGT00940000158215.o	ENSGT00390000008250.g	ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b	ENSGT00940000154308.A.b.a.a.b	ENSGT00950000182920.b.a.b.a.a.g	ENSGT00390000007252.c.e	ENSGT00940000154949.b.hb.b	ENSGT00940000159031.y.a	ENSGT00940000157122.b.a.e	ENSGT00390000002245.h	ENSGT00940000164407.a.b.a.a	ENSGT00940000159778.a.d
Oncorhynchus_a	ANCESTRAL SPECIES	30	ENSGT00940000156990	ENSGT00990000204039	ENSGT00940000155429.a.a.a	ENSGT00940000161376	ENSGT00390000014293.a.d	ENSGT00940000155397.a.b.g	ENSGT00990000214324	ENSGT00530000063169.a.q	ENSGT00730000111645.a.c	ENSGT00530000062962.b.b	ENSGT00940000155903.g.a	ENSGT00900000140979.a.a.n.b	ENSGT00530000063652.a.a.a	ENSGT00940000156306.c	ENSGT00390000008787.a	ENSGT00950000182866.D.d.a.c.a.i.b.a.b ##22	ENSGT00950000182916.a.b.a.b.u.b	ENSGT00940000158006.b	ENSGT00550000074944.l	ENSGT00940000158215.o	ENSGT00390000008250.g	ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b	ENSGT00940000154308.A.b.a.a.b	ENSGT00950000182920.b.a.b.a.a.g	ENSGT00390000007252.c.e	ENSGT00940000154949.b.hb.b	ENSGT00940000159031.y.a	ENSGT00940000157122.b.a.e	ENSGT00390000002245.h	ENSGT00940000164407.a.b.a.a	ENSGT00940000159778.a.d
Chinook salmon	MODERN SPECIES	1	ENSOTSG00005047229	frem1a (ENSOTSG00005047230)	ENSOTSG00005047231	tspan5a (ENSOTSG00005047233)	RAP1GDS1 (ENSOTSG00005047234)	slc1a1 (ENSOTSG00005047237)	ENSOTSG00005047253	trmt10a (ENSOTSG00005047255)	C4orf54 (ENSOTSG00005047256)	hacd4 (ENSOTSG00005047257)	mllt3 (ENSOTSG00005047259)	H2AZ1 (ENSOTSG00005000689)	DDIT4L (ENSOTSG00005000760)	PPP3CA (ENSOTSG00005001494)	BANK1 (ENSOTSG00005001506)	nxpe3 (ENSOTSG00005001510) ##22	ENSOTSG00005001512	zdhhc21 (ENSOTSG00005001513)	plaa (ENSOTSG00005001522)	DENND4C (ENSOTSG00005001557)	haus6 (ENSOTSG00005001767)	ENSOTSG00005001793	ENSOTSG00005001798	plin2 (ENSOTSG00005001802)	ENSOTSG00005001807	larp7 (ENSOTSG00005001815)	coro1b (ENSOTSG00005001823)	dtx4a (ENSOTSG00005001851)	msantd1 (ENSOTSG00005001866)	ENSOTSG00005001873	HGFAC (ENSOTSG00005001889)
Coho salmon	MODERN SPECIES	7	ENSOKIG00005023830	frem1a (ENSOKIG00005023905)	ENSOKIG00005024300	ENSOKIG00005024316	RAP1GDS1 (ENSOKIG00005024358)	slc1a1 (ENSOKIG00005024458)	ENSOKIG00005024977	trmt10a (ENSOKIG00005024987)	C4orf54 (ENSOKIG00005025004)	hacd4 (ENSOKIG00005025014)	mllt3 (ENSOKIG00005025061)	H2AZ1 (ENSOKIG00005025091)	DDIT4L (ENSOKIG00005025212)	PPP3CA (ENSOKIG00005025273)	BANK1 (ENSOKIG00005025483)	NXPE3 (ENSOKIG00005025501) ##22	NFIB (ENSOKIG00005025535)	ZDHHC21 (ENSOKIG00005025640)	PLAA (ENSOKIG00005025707)	ENSOKIG00005026700	haus6 (ENSOKIG00005027182)	ENSOKIG00005027220	ENSOKIG00005027238	plin2 (ENSOKIG00005027244)	ENSOKIG00005027261	ENSOKIG00005027291	coro1b (ENSOKIG00005027344)	dtx4a (ENSOKIG00005027384)	msantd1 (ENSOKIG00005027413)	ENSOKIG00005027438	HGFAC (ENSOKIG00005025259)
Huchen	MODERN SPECIES	1357																nxpe3 (ENSHHUG00000032327) ##22	NFIB (ENSHHUG00000032331)	zdhhc21 (ENSHHUG00000032610)	plaa (ENSHHUG00000032614)	ENSHHUG00000032626	ENSHHUG00000032628	DENND4C (ENSHHUG00000032637)	haus6 (ENSHHUG00000032821)	ENSHHUG00000032837	ENSHHUG00000032840	ENSHHUG00000032841	ENSHHUG00000032846	plin2 (ENSHHUG00000032848)	ENSHHUG00000032850	ENSHHUG00000032856
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b.b ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b.b ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b.b ##22
Rainbow trout	MODERN SPECIES	126														ENSOMYG00000037422	ENSOMYG00000065186	ENSOMYG00000027070 ##22	ENSOMYG00000075027	ENSOMYG00000077142	ENSOMYG00000054252
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.i.b.b ##22
Chinook salmon	MODERN SPECIES	1485																nxpe3 (ENSOTSG00005031286) ##22
Coho salmon	DUPLICATION
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	1011																NXPE3 (ENSOKIG00005042480) ##22
Coho salmon	MODERN SPECIES	31	irx1a (ENSOKIG00005027150)	ENSOKIG00005027148	ENSOKIG00005027127	ENSOKIG00005027103 ##31	ENSOKIG00005027068 ##31	FAM210A (ENSOKIG00005027051)	ldlrad4b (ENSOKIG00005027022)	ENSOKIG00005027001	ENSOKIG00005026958	ENSOKIG00005026936	SEH1L (ENSOKIG00005026610)	ptpn2a (ENSOKIG00005026578)	cep76 (ENSOKIG00005026474)	id4 (ENSOKIG00005026460)	ENSOKIG00005026446	NXPE3 (ENSOKIG00005018374) ##22	ncalda (ENSOKIG00005018360)	ENSOKIG00005018355	ENSOKIG00005018205	ENSOKIG00005017998	ENSOKIG00005017976	RNF19A (ENSOKIG00005017957)	ENSOKIG00005017899	POP1 (ENSOKIG00005017872)	RIDA (ENSOKIG00005017858)	NIPAL2 (ENSOKIG00005017847)	KCNS2 (ENSOKIG00005017842)	OSR2 (ENSOKIG00005017820)	ENSOKIG00005017774	ENSOKIG00005017765	ENSOKIG00005017737
Coho salmon	MODERN SPECIES	69																NXPE3 (ENSOKIG00005034744) ##22
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	21	ENSELUG00000022077	inha (ENSELUG00000022062)	spega (ENSELUG00000022047)	CTDSP1 (ENSELUG00000021761)	cnppd1 (ENSELUG00000021728)	ENSELUG00000021709	retreg2 (ENSELUG00000021648)	ENSELUG00000021633	mdh1b (ENSELUG00000021611)	ENSELUG00000021582	ENSELUG00000021563	raph1b (ENSELUG00000021497)	spp2 (ENSELUG00000029627)	alg11 (ENSELUG00000021401)	cpb2 (ENSELUG00000021373)	nxpe3 (ENSELUG00000021312) ##22	nxpe3 (ENSELUG00000021253) ##22	TMEM163 (ENSELUG00000021194)	mgat5 (ENSELUG00000021168)	PTH2R (ENSELUG00000021121)	agpat3 (ENSELUG00000021072)	pdxkb (ENSELUG00000021033)	TMPRSS3 (ENSELUG00000020975)	ENSELUG00000000914	ENSELUG00000020797	ITSN1 (ENSELUG00000020734)	cryzl1 (ENSELUG00000020661)	setd4 (ENSELUG00000020643)	cbr1 (ENSELUG00000020616)	bcl9 (ENSELUG00000020591)	gja5b (ENSELUG00000020556)
Northern pike	MODERN SPECIES	21	inha (ENSELUG00000022062)	spega (ENSELUG00000022047)	CTDSP1 (ENSELUG00000021761)	cnppd1 (ENSELUG00000021728)	ENSELUG00000021709	retreg2 (ENSELUG00000021648)	ENSELUG00000021633	mdh1b (ENSELUG00000021611)	ENSELUG00000021582	ENSELUG00000021563	raph1b (ENSELUG00000021497)	spp2 (ENSELUG00000029627)	alg11 (ENSELUG00000021401)	cpb2 (ENSELUG00000021373)	nxpe3 (ENSELUG00000021312) ##22	nxpe3 (ENSELUG00000021253) ##22	TMEM163 (ENSELUG00000021194)	mgat5 (ENSELUG00000021168)	PTH2R (ENSELUG00000021121)	agpat3 (ENSELUG00000021072)	pdxkb (ENSELUG00000021033)	TMPRSS3 (ENSELUG00000020975)	ENSELUG00000000914	ENSELUG00000020797	ITSN1 (ENSELUG00000020734)	cryzl1 (ENSELUG00000020661)	setd4 (ENSELUG00000020643)	cbr1 (ENSELUG00000020616)	bcl9 (ENSELUG00000020591)	gja5b (ENSELUG00000020556)	gja8b (ENSELUG00000020543)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.j ##22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.j ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.j ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.j ##22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.j ##22
Coho salmon	MODERN SPECIES	11	MEGF8 (ENSOKIG00005000808)	ENSOKIG00005000786	trim35-28 (ENSOKIG00005000783)	cxcr3.2 (ENSOKIG00005000774)	ENSOKIG00005000764	tlr21 (ENSOKIG00005000760)	ENSOKIG00005000755	ENSOKIG00005000750 ##31	PAFAH1B3 (ENSOKIG00005000745) ##31	ENSOKIG00005000664	ENSOKIG00005000587	ENSOKIG00005000563	ENSOKIG00005000540	ENSOKIG00005000505	ENSOKIG00005000485	ENSOKIG00005000479 ##22	GRIK5 (ENSOKIG00005000322)	znf574 (ENSOKIG00005000163)	gsk3ab (ENSOKIG00005000138)	ENSOKIG00005000028	ENSOKIG00005000016	ENSOKIG00005025573	ERF (ENSOKIG00005025554)	POU2F2 (ENSOKIG00005025518)	dedd1 (ENSOKIG00005025504)	ENSOKIG00005025500	ENSOKIG00005025469	ENSOKIG00005025453	ENSOKIG00005025439	ENO2 (ENSOKIG00005025306)	mlf2 (ENSOKIG00005025264)
Salmo	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.a.j ##22
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000107403	ENSSSAG00000059107	gsk3ab (ENSSSAG00000092306)	znf574 (ENSSSAG00000096417)	ENSSSAG00000102265	ENSSSAG00000084182 ##22	ENSSSAG00000121983	ENSSSAG00000086972	ENSSSAG00000039240	ENSSSAG00000114015	ENSSSAG00000083894	ENSSSAG00000057280	ENSSSAG00000112024	ENSSSAG00000111321	ENSSSAG00000082131	ENSSSAG00000057331 ##22	ENSSSAG00000114240	ENSSSAG00000104670	ENSSSAG00000057337	ENSSSAG00000092134	ENSSSAG00000057399 ##31	ENSSSAG00000057366 ##31	ENSSSAG00000057405	cxcr3.2 (ENSSSAG00000116125)	ENSSSAG00000100590	ENSSSAG00000057429	ENSSSAG00000057438	ENSSSAG00000036389	ENSSSAG00000049764	ENSSSAG00000101726	ENSSSAG00000036532
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a ##22
Euacanthomorphacea	DUPLICATION
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES	21	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00940000153582.a.n	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263533.b.b.b.a.a.a.b.a	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014
Ovalentaria	ANCESTRAL SPECIES	22	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263533.b.b.b.a.a.a.b.a	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713
Ovalentaria_B	ANCESTRAL SPECIES	29	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263533.b.b.b.a.a.a.b.a	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713
Cichlidae	DUPLICATION
Cichlidae	DUPLICATION
Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a ##22
Midas cichlid	MODERN SPECIES	1410																NXPE3 (ENSACIG00000013075) ##22
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.a ##22
Nile tilapia	MODERN SPECIES	150												ENSONIG00000031645	ENSONIG00000004218	ENSONIG00000034716	ENSONIG00000029019	NXPE3 (ENSONIG00000034701) ##22	ENSONIG00000007408	ENSONIG00000037474	ENSONIG00000039266	ENSONIG00000032343	ENSONIG00000030090
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.a ##22
Lyretail cichlid	MODERN SPECIES	424	ENSNBRG00000012528	ENSNBRG00000012560	ENSNBRG00000012571	si:dkey-16p21.8 (ENSNBRG00000012621)	prl (ENSNBRG00000012633)	prl (ENSNBRG00000012705)	dusp3b (ENSNBRG00000013098)	thraa (ENSNBRG00000013365)	nsfa (ENSNBRG00000014850)	cdk5r1a (ENSNBRG00000015130)	rpain (ENSNBRG00000015144)	PSMD11 (ENSNBRG00000015159)	DLX3 (ENSNBRG00000015183)	ENSNBRG00000015209	nags (ENSNBRG00000015229)	ENSNBRG00000015267 ##22
Pseudocrenilabrinae	ANCESTRAL SPECIES	60						ENSGT01090000260510	ENSGT01090000260327.c.a	ENSGT01030000234850.B	ENSGT01030000234850.A.a	ENSGT00940000174690.a.b	ENSGT01030000234850.A.b.a	ENSGT00950000183391.C	ENSGT00940000174690.b	ENSGT00950000183391.B	ENSGT01080000257521.A.a	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.b ##22	ENSGT01080000257521.A.b	ENSGT00940000174690.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	73					ENSGT00940000175713.B	ENSGT00940000175853	ENSGT01090000260510.b	ENSGT01090000260327.c.a	ENSGT01030000234850.B.c	ENSGT01030000234850.A.a	ENSGT01030000234850.B.d	ENSGT01030000234850.A.b.a	ENSGT00950000183391.C	ENSGT00950000183391.B	ENSGT01080000257521.A.a.b	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.b ##22	ENSGT01080000257521.A.b	ENSGT00940000174690.a.a
Haplochromini	ANCESTRAL SPECIES	28	ENSGT00950000182968.d.b.b.e	ENSGT00950000182968.d.a.a.b	ENSGT00940000175713.C	ENSGT00940000172678.a.b.a	ENSGT00940000172678.a.a.a.a	ENSGT00940000172678.b.a	ENSGT00940000172678.a.b.b	ENSGT00940000175713.B	ENSGT00940000175853	ENSGT01090000260510.b	ENSGT01090000260327.c.a	ENSGT01030000234850.A.a.c.b	ENSGT01030000234850.A.b.a.a	ENSGT00950000183391.C	ENSGT01080000257521.A.a.b	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.b ##22	ENSGT01080000257521.A.b	ENSGT00940000174690.a.a	ENSGT00990000204066.B	ENSGT00990000204066.A	ENSGT00940000154589.b.t	ENSGT00940000165455.a	ENSGT00940000154589.b.s	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f	ENSGT00390000009529
Haplochromini_A	ANCESTRAL SPECIES	62										ENSGT01030000234850.B.c.a	ENSGT01030000234850.A.a.c.a	ENSGT01030000234850.A.a.c.b	ENSGT01030000234850.A.b.a.a	ENSGT00950000183391.C	ENSGT01080000257521.A.a.b	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.b ##22	ENSGT01080000257521.A.b	ENSGT00940000174690.a.a	ENSGT01080000257521.B	ENSGT00990000204066.B	ENSGT00990000204066.A	ENSGT00940000154589.b.t	ENSGT00940000165455.a	ENSGT00940000154589.b.s	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f
Haplochromini_B	ANCESTRAL SPECIES	82															ENSGT01080000257521.A.a.b	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.a.b ##22	ENSGT01080000257521.A.b	ENSGT00940000174690.a.a	ENSGT01080000257521.B	ENSGT00990000204066.B	ENSGT00990000204066.A	ENSGT00940000154589.b.t.a	ENSGT00940000165455.a	ENSGT00940000154589.b.s	ENSGT00940000165455.b	ENSGT00950000183189.a.a	ENSGT00390000014634	ENSGT00940000155658	ENSGT00730000112044	ENSGT00910000145429	ENSGT00940000155795.f
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1106	rbm4.3 (ENSMZEG00005007417)	TIFA (ENSMZEG00005007400)	ENSMZEG00005007378	ENSMZEG00005007359	ENSMZEG00005007348	ENSMZEG00005007332	ENSMZEG00005007322	ENSMZEG00005007198	ENSMZEG00005007184	ENSMZEG00005007170	ENSMZEG00005007156	ENSMZEG00005007137	ENSMZEG00005007123	ENSMZEG00005006995	ENSMZEG00005006959	NXPE3 (ENSMZEG00005006926) ##22	NXPE3 (ENSMZEG00005006872) ##22	ENSMZEG00005006836	ENSMZEG00005006815	ENSMZEG00005006801	ENSMZEG00005006783	ENSMZEG00005006763	ENSMZEG00005006753	ENSMZEG00005006733	ENSMZEG00005006721	ENSMZEG00005006706	ENSMZEG00005006681	ENSMZEG00005006597	ENSMZEG00005006562	ENSMZEG00005006544	ENSMZEG00005006521
Zebra mbuna	MODERN SPECIES	1106	TIFA (ENSMZEG00005007400)	ENSMZEG00005007378	ENSMZEG00005007359	ENSMZEG00005007348	ENSMZEG00005007332	ENSMZEG00005007322	ENSMZEG00005007198	ENSMZEG00005007184	ENSMZEG00005007170	ENSMZEG00005007156	ENSMZEG00005007137	ENSMZEG00005007123	ENSMZEG00005006995	ENSMZEG00005006959	NXPE3 (ENSMZEG00005006926) ##22	NXPE3 (ENSMZEG00005006872) ##22	ENSMZEG00005006836	ENSMZEG00005006815	ENSMZEG00005006801	ENSMZEG00005006783	ENSMZEG00005006763	ENSMZEG00005006753	ENSMZEG00005006733	ENSMZEG00005006721	ENSMZEG00005006706	ENSMZEG00005006681	ENSMZEG00005006597	ENSMZEG00005006562	ENSMZEG00005006544	ENSMZEG00005006521	ENSMZEG00005006490
Eastern happy	MODERN SPECIES	15	ENSACLG00000009029	ENSACLG00000009049	ENSACLG00000009105	ENSACLG00000009141	ENSACLG00000009158	ENSACLG00000009289	ENSACLG00000009296	ANK2 (ENSACLG00000009369)	ENSACLG00000009480	ENSACLG00000009999	ENSACLG00000010006	ENSACLG00000010010	ENSACLG00000010015	ENSACLG00000010039	ENSACLG00000010045	NXPE3 (ENSACLG00000010451) ##22	ENSACLG00000010502	ENSACLG00000010513	ENSACLG00000010533	ENSACLG00000010552	ENSACLG00000010568	ENSACLG00000010575	ENSACLG00000010591	TIFA (ENSACLG00000010613)	rbm4.3 (ENSACLG00000010620)	TIFA (ENSACLG00000010631)	rbm4.3 (ENSACLG00000010642)	fxr2 (ENSACLG00000010657)	haus4 (ENSACLG00000010683)	dock11 (ENSACLG00000010763)	ENSACLG00000010891
Lyretail cichlid	MODERN SPECIES	383			ENSNBRG00000012982	ENSNBRG00000012963	ENSNBRG00000012949	ENSNBRG00000012872	ENSNBRG00000012827	ENSNBRG00000012816	ENSNBRG00000012808	ENSNBRG00000012792	ENSNBRG00000012760	ENSNBRG00000012745	ENSNBRG00000012738	ENSNBRG00000012730	ENSNBRG00000012629	NXPE3 (ENSNBRG00000012610) ##22	ENSNBRG00000012603	ENSNBRG00000012555	ENSNBRG00000012514	ENSNBRG00000012489	ENSNBRG00000012466	ENSNBRG00000012450	ENSNBRG00000012427	ENSNBRG00000012417	ENSNBRG00000012400	rbm4.3 (ENSNBRG00000012395)	ENSNBRG00000012383	rbm4.3 (ENSNBRG00000012372)	fxr2 (ENSNBRG00000012358)	haus4 (ENSNBRG00000012342)	dock11 (ENSNBRG00000012240)
Nile tilapia	MODERN SPECIES	15	ENSONIG00000032876	ENSONIG00000041597	ENSONIG00000036833	ENSONIG00000030834	ENSONIG00000018389	ENSONIG00000038180	ENSONIG00000018387	ENSONIG00000030005	ENSONIG00000027187	ENSONIG00000036472	ENSONIG00000018388	ENSONIG00000036132	ENSONIG00000029339	ENSONIG00000036299	ENSONIG00000018386	NXPE3 (ENSONIG00000010400) ##22	ENSONIG00000018385	ENSONIG00000029452	ENSONIG00000040462	ENSONIG00000018393	ENSONIG00000001449	ENSONIG00000042027	ENSONIG00000033664	TIFA (ENSONIG00000018382)	rbm4.3 (ENSONIG00000018380)	TIFA (ENSONIG00000018379)	rbm4.3 (ENSONIG00000042982)	fxr2 (ENSONIG00000018373)	haus4 (ENSONIG00000018372)	dock11 (ENSONIG00000018344)	ENSONIG00000040403
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.b ##22
Nile tilapia	DUPLICATION
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	8	b3galt2 (ENSONIG00000020505)	ENSONIG00000031978	ENSONIG00000028249	cfh (ENSONIG00000010940)	ENSONIG00000038913	cfhl4 (ENSONIG00000033270)	ENSONIG00000040706	ENSONIG00000034416	ENSONIG00000030219	ENSONIG00000010939	NXPE3 (ENSONIG00000003801) ##22	ENSONIG00000041500	ENSONIG00000029115	ENSONIG00000038098	ENSONIG00000040498 ##22	NXPE3 (ENSONIG00000007980) ##22	aspm (ENSONIG00000003791)	ENSONIG00000037532	f2r (ENSONIG00000016111)	depdc1a (ENSONIG00000003784)	rpe65b (ENSONIG00000003773)	si:ch211-198n5.11 (ENSONIG00000003770)	fnbp1l (ENSONIG00000003764)	bcar3 (ENSONIG00000003760)	hps3 (ENSONIG00000003752)	ENSONIG00000027731	b3gat1a (ENSONIG00000003750)	ENSONIG00000035489	ENSONIG00000041410	ENSONIG00000029705	ENSONIG00000029296
Nile tilapia	MODERN SPECIES	8	glrx2 (ENSONIG00000010947)	b3galt2 (ENSONIG00000020505)	ENSONIG00000031978	ENSONIG00000028249	cfh (ENSONIG00000010940)	ENSONIG00000038913	cfhl4 (ENSONIG00000033270)	ENSONIG00000040706	ENSONIG00000034416	ENSONIG00000030219	ENSONIG00000010939	NXPE3 (ENSONIG00000003801) ##22	ENSONIG00000041500	ENSONIG00000029115	ENSONIG00000038098	ENSONIG00000040498 ##22	NXPE3 (ENSONIG00000007980) ##22	aspm (ENSONIG00000003791)	ENSONIG00000037532	f2r (ENSONIG00000016111)	depdc1a (ENSONIG00000003784)	rpe65b (ENSONIG00000003773)	si:ch211-198n5.11 (ENSONIG00000003770)	fnbp1l (ENSONIG00000003764)	bcar3 (ENSONIG00000003760)	hps3 (ENSONIG00000003752)	ENSONIG00000027731	b3gat1a (ENSONIG00000003750)	ENSONIG00000035489	ENSONIG00000041410	ENSONIG00000029705
Nile tilapia	MODERN SPECIES	8	ENSONIG00000010958	RGS13 (ENSONIG00000010956)	ENSONIG00000039471	uchl5 (ENSONIG00000010950)	glrx2 (ENSONIG00000010947)	b3galt2 (ENSONIG00000020505)	ENSONIG00000031978	ENSONIG00000028249	cfh (ENSONIG00000010940)	ENSONIG00000038913	cfhl4 (ENSONIG00000033270)	ENSONIG00000040706	ENSONIG00000034416	ENSONIG00000030219	ENSONIG00000010939	NXPE3 (ENSONIG00000003801) ##22	ENSONIG00000041500	ENSONIG00000029115	ENSONIG00000038098	ENSONIG00000040498 ##22	NXPE3 (ENSONIG00000007980) ##22	aspm (ENSONIG00000003791)	ENSONIG00000037532	f2r (ENSONIG00000016111)	depdc1a (ENSONIG00000003784)	rpe65b (ENSONIG00000003773)	si:ch211-198n5.11 (ENSONIG00000003770)	fnbp1l (ENSONIG00000003764)	bcar3 (ENSONIG00000003760)	hps3 (ENSONIG00000003752)	ENSONIG00000027731
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00940000154304.C	ENSGT00940000165058.a	ENSGT00940000156099	ENSGT00940000157316.e.b	ENSGT00940000157316.f	ENSGT00940000158520.e.b	ENSGT00940000157937.b.d	ENSGT00940000155195	ENSGT00940000164211	ENSGT00940000155117.f.a	ENSGT00940000154967.b.b.a.l	ENSGT00940000154386	ENSGT00940000154967.b.b.b	ENSGT00940000154967.b.b.a.k	ENSGT00940000174597	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.a.b ##22	ENSGT00560000077332	ENSGT00950000182976.b.a	ENSGT00950000182913.B.f	ENSGT00940000164186.a	ENSGT00950000183047.c.b	ENSGT00940000154130.a.a.b	ENSGT00390000015458	ENSGT00390000013701	ENSGT00950000183189.a.b.a	ENSGT00940000154384	ENSGT00940000160614	ENSGT00940000164897.a.b.b	ENSGT00940000156162.C	ENSGT00940000156941	ENSGT00950000182899.C.a
Lyretail cichlid	MODERN SPECIES	343	rgs16 (ENSNBRG00000021866)	rgs8 (ENSNBRG00000021851)	brinp3a.1 (ENSNBRG00000021835)	brinp3a.2 (ENSNBRG00000021812)	RGS1 (ENSNBRG00000021799)	ENSNBRG00000021783	RGS13 (ENSNBRG00000021769)	ENSNBRG00000021750	uchl5 (ENSNBRG00000021721)	ENSNBRG00000021710	b3galt2 (ENSNBRG00000021706)	ENSNBRG00000021698	ENSNBRG00000021687	ENSNBRG00000021666	ENSNBRG00000021649	NXPE3 (ENSNBRG00000021635) ##22	ENSNBRG00000021574	depdc1a (ENSNBRG00000021479)	rpe65b (ENSNBRG00000021436)	si:ch211-198n5.11 (ENSNBRG00000021401)	fnbp1l (ENSNBRG00000021354)	bcar3 (ENSNBRG00000021258)	hps3 (ENSNBRG00000021182)	ttc14 (ENSNBRG00000021095)	fxr1 (ENSNBRG00000021072)	dnajc19 (ENSNBRG00000021053)	sox2 (ENSNBRG00000021046)	ENSNBRG00000021036	ENSNBRG00000021026	ATP11B (ENSNBRG00000020967)	ENSNBRG00000020946
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.a.b ##22
Nile tilapia	MODERN SPECIES	15	ENSONIG00000039368	ENSONIG00000037156	ENSONIG00000041677	ENSONIG00000011629	ENSONIG00000029011	ENSONIG00000011628	ENSONIG00000030070	ENSONIG00000006258	ENSONIG00000042146	ENSONIG00000027871	ENSONIG00000035142	ENSONIG00000041947	ENSONIG00000036338	ENSONIG00000030864	ENSONIG00000036091	NXPE3 (ENSONIG00000039534) ##22	ENSONIG00000042727	ENSONIG00000040977	ENSONIG00000027764	ENSONIG00000039466	ENSONIG00000040315	ENSONIG00000041262	ENSONIG00000018182	ENSONIG00000034245	ENSONIG00000030623	ENSONIG00000031549	ENSONIG00000042985	ENSONIG00000038474	ENSONIG00000033791	ENSONIG00000032488	ENSONIG00000038315
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.b ##22
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.b ##22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.b ##22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.b ##22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.b ##22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.a.b ##22
Zebra mbuna	MODERN SPECIES	92													ENSMZEG00005000457	ENSMZEG00005000482	cmah (ENSMZEG00005000510)	NXPE3 (ENSMZEG00005000574) ##22	ENSMZEG00005000639	ENSMZEG00005000646
Lyretail cichlid	MODERN SPECIES	631															ENSNBRG00000007495	NXPE3 (ENSNBRG00000007513) ##22	slc2a15a (ENSNBRG00000007563)	fgf8a (ENSNBRG00000007605)	fbxw4 (ENSNBRG00000007618)
Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.b.a ##22
Midas cichlid	MODERN SPECIES	1795																ENSACIG00000009671 ##22
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.b.a ##22
Nile tilapia	MODERN SPECIES	8	lg17h1orf52 (ENSONIG00000028969)	SYDE2 (ENSONIG00000008886)	DNAI3 (ENSONIG00000008888)	MCOLN3 (ENSONIG00000008895)	gpsm2l (ENSONIG00000008903)	si:ch211-262h13.5 (ENSONIG00000008908)	EPHB1 (ENSONIG00000008909)	gpc1a (ENSONIG00000008922)	ENSONIG00000008929	nasp (ENSONIG00000008932)	LRRC7 (ENSONIG00000008936)	ENSONIG00000008942	MELTF (ENSONIG00000008946)	ENSONIG00000031854	fkbp2 (ENSONIG00000032293)	NXPE3 (ENSONIG00000009076) ##22	ENSONIG00000029145	ENSONIG00000039643	ncbp2 (ENSONIG00000033640)	ENSONIG00000029563	ENSONIG00000038977	ncbp2 (ENSONIG00000034872)	ENSONIG00000029293	ncbp2 (ENSONIG00000033721)	ENSONIG00000030189	ENSONIG00000031784	ENSONIG00000035504	ncbp2 (ENSONIG00000008314)	cp (ENSONIG00000008332)	ENSONIG00000008349	ENSONIG00000040500
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.b.a ##22
Lyretail cichlid	MODERN SPECIES	1047																ENSNBRG00000011686 ##22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.b.a ##22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.a.b.a ##22
P. nyererei	MODERN SPECIES	728																NXPE3 (ENSPNYG00000011406) ##22	ENSPNYG00000011384	ENSPNYG00000011370	ENSPNYG00000011351	depdc1a (ENSPNYG00000011321)	rpe65b (ENSPNYG00000011290)	si:ch211-198n5.11 (ENSPNYG00000011270)	fnbp1l (ENSPNYG00000011230)	bcar3 (ENSPNYG00000011169)	hps3 (ENSPNYG00000011131)
Cichlidae	ANCESTRAL SPECIES	84																ENSGT00950000182866.D.d.a.c.b.a.a.a.b.b ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT01040000240400.c.a.b.a.a.d.a.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	36																ENSGT00950000182866.D.d.a.c.b.a.a.a.b.b ##22	ENSGT00940000164836	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.db.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT01040000240400.c.a.b.a.a.d.a.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	45																ENSGT00950000182866.D.d.a.c.b.a.a.a.b.b ##22	ENSGT00940000164836	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.db.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT01040000240400.c.a.b.a.a.d.a.a.a
Haplochromini	ANCESTRAL SPECIES	50																ENSGT00950000182866.D.d.a.c.b.a.a.a.b.b ##22	ENSGT00940000164836	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000171263	ENSGT00510000047886.b.db.a	ENSGT00510000047886.b.db.b	ENSGT00940000157713	ENSGT00940000154980
Burton s mouthbrooder	MODERN SPECIES	669																NXPE3 (ENSHBUG00000006021) ##22	ENSHBUG00000006007	ENSHBUG00000005966	SELENOO (ENSHBUG00000005949)	ENSHBUG00000005931	apex1 (ENSHBUG00000005894)	osgep (ENSHBUG00000005871)	si:ch211-214j24.10 (ENSHBUG00000005808)	ENSHBUG00000005796	ENSHBUG00000005758	nav3 (ENSHBUG00000005748)
Haplochromini_A	ANCESTRAL SPECIES	57																ENSGT00950000182866.D.d.a.c.b.a.a.a.b.b ##22	ENSGT00940000164836	ENSGT00990000205182.a	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000171263	ENSGT00510000047886.b.db.a	ENSGT00510000047886.b.db.b	ENSGT00940000157713
Haplochromini_B	ANCESTRAL SPECIES	62																ENSGT00950000182866.D.d.a.c.b.a.a.a.b.b ##22	ENSGT00940000164836	ENSGT00990000205182.a	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263533.b.b.b.a.a.a.b.a	ENSGT00400000022326.b.b.b	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000155849.h.b.b	ENSGT00940000171263	ENSGT00510000047886.b.db.a.a
Eastern happy	MODERN SPECIES	8	ENSACLG00000020399	LRRC24 (ENSACLG00000020340)	LONP1 (ENSACLG00000020238)	ENSACLG00000020226	RSPH6A (ENSACLG00000020217)	dohh (ENSACLG00000020170)	cherp (ENSACLG00000020053)	klf2a (ENSACLG00000020002)	EPS15L1 (ENSACLG00000019765)	ENSACLG00000019728	ENSACLG00000018909	ARHGAP39 (ENSACLG00000018822)	rad54l (ENSACLG00000018711)	slc5a9 (ENSACLG00000018671)	ENSACLG00000018652	NXPE3 (ENSACLG00000018614) ##22	ENSACLG00000018586	ENSACLG00000018573	ENSACLG00000018564	SELENOO (ENSACLG00000018547)	ENSACLG00000018457	apex1 (ENSACLG00000018441)	osgep (ENSACLG00000018378)	si:ch211-214j24.10 (ENSACLG00000018365)	ENSACLG00000018350	ENSACLG00000018326	ENSACLG00000018320	nav3 (ENSACLG00000018218)	ENSACLG00000018185	ENSACLG00000018177	net1 (ENSACLG00000018084)
Zebra mbuna	MODERN SPECIES	1099	TTC22 (ENSMZEG00005014557)	lurap1 (ENSMZEG00005014553)	lepr (ENSMZEG00005014517)	DNAJC6 (ENSMZEG00005014454)	ak4 (ENSMZEG00005014435)	jak1 (ENSMZEG00005014405)	RAVER2 (ENSMZEG00005014386)	CACHD1 (ENSMZEG00005014345)	ENSMZEG00005014314	ENSMZEG00005014304	ENSMZEG00005014297	enkur (ENSMZEG00005014290)	ROR1 (ENSMZEG00005014280)	ENSMZEG00005014273	ENSMZEG00005014264	NXPE3 (ENSMZEG00005014252) ##22	ENSMZEG00005014241	ENSMZEG00005014233	SELENOO (ENSMZEG00005014225)	ENSMZEG00005014202	apex1 (ENSMZEG00005014187)	osgep (ENSMZEG00005014161)	si:ch211-214j24.10 (ENSMZEG00005014181)	ENSMZEG00005014144	ENSMZEG00005014122	ENSMZEG00005014118	nav3 (ENSMZEG00005014007)	net1 (ENSMZEG00005013972)	ENSMZEG00005013961	ENSMZEG00005013952	ENSMZEG00005010164
P. nyererei	MODERN SPECIES	642																NXPE3 (ENSPNYG00000023955) ##22	ENSPNYG00000023953	ENSPNYG00000023952	SELENOO (ENSPNYG00000023949)	ENSPNYG00000023946	ENSPNYG00000023944	ENSPNYG00000023942	apex1 (ENSPNYG00000023940)	osgep (ENSPNYG00000023936)	si:ch211-214j24.10 (ENSPNYG00000023934)	ENSPNYG00000023932	ENSPNYG00000023931	nav3 (ENSPNYG00000023930)
Lyretail cichlid	MODERN SPECIES	432																NXPE3 (ENSNBRG00000005132) ##22	ENSNBRG00000005172	selenoo2 (ENSNBRG00000005216)	ENSNBRG00000005315	apex1 (ENSNBRG00000005334)	osgep (ENSNBRG00000005343)	si:ch211-214j24.10 (ENSNBRG00000005384)	ENSNBRG00000005406	ENSNBRG00000005423	ENSNBRG00000005432	ENSNBRG00000005464	ENSNBRG00000005497	ENSNBRG00000005611	ENSNBRG00000005817	ENSNBRG00000005827	ENSNBRG00000005846
Nile tilapia	MODERN SPECIES	372																NXPE3 (ENSONIG00000040520) ##22	ENSONIG00000009078	ENSONIG00000036859	ENSONIG00000036555
Midas cichlid	MODERN SPECIES	666																NXPE3 (ENSACIG00000010977) ##22	ENSACIG00000010796	ENSACIG00000010757	ENSACIG00000010724	SELENOO (ENSACIG00000010681)	ENSACIG00000010667	si:dkey-14k9.3 (ENSACIG00000010662)	apex1 (ENSACIG00000010653)	osgep (ENSACIG00000010625)	si:ch211-214j24.10 (ENSACIG00000010613)	ENSACIG00000010604	ENSACIG00000010585	ENSACIG00000010580	nav3 (ENSACIG00000010477)	ENSACIG00000010460	csrp2 (ENSACIG00000010442)
Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES	61	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a ##22
Pseudocrenilabrinae	ANCESTRAL SPECIES	23	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a ##22	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a
Nile tilapia	MODERN SPECIES	8	ENSONIG00000011873	coa6 (ENSONIG00000041513)	slc13a4 (ENSONIG00000011885)	zgc:162331 (ENSONIG00000011886)	BMAL2 (ENSONIG00000011887)	stk38l (ENSONIG00000011890)	med21 (ENSONIG00000035522)	fgfr1op2 (ENSONIG00000011894)	TM7SF3 (ENSONIG00000011896)	gas2l3 (ENSONIG00000011899)	arid2 (ENSONIG00000011901)	ENSONIG00000011907	slc38a4 (ENSONIG00000011911)	AMIGO2 (ENSONIG00000037740)	ANO4 (ENSONIG00000011913)	NXPE3 (ENSONIG00000014091) ##22	ENSONIG00000031592	ENSONIG00000009979	ccl25b (ENSONIG00000040787)	ENSONIG00000009981	ENSONIG00000011921	ENSONIG00000011923	lurap1 (ENSONIG00000037764)	lepr (ENSONIG00000011926)	DNAJC6 (ENSONIG00000008789)	ak4 (ENSONIG00000008798)	jak1 (ENSONIG00000008800)	RAVER2 (ENSONIG00000008808)	ENSONIG00000008813	CACHD1 (ENSONIG00000008810)	ROR1 (ENSONIG00000008814)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a ##22	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a ##22	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b
Burton s mouthbrooder	MODERN SPECIES	627	coa6 (ENSHBUG00000011393)	slc13a4 (ENSHBUG00000011465)	zgc:162331 (ENSHBUG00000011481)	BMAL2 (ENSHBUG00000011501)	stk38l (ENSHBUG00000011539)	med21 (ENSHBUG00000011560)	fgfr1op2 (ENSHBUG00000011584)	TM7SF3 (ENSHBUG00000011594)	gas2l3 (ENSHBUG00000011600)	arid2 (ENSHBUG00000011615)	ENSHBUG00000011628	slc38a2 (ENSHBUG00000011731)	slc38a4 (ENSHBUG00000011860)	ENSHBUG00000011884	ANO4 (ENSHBUG00000000330)	NXPE3 (ENSHBUG00000011938) ##22
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a ##22	ENSGT00900000141362.a.b.c.b	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B
Haplochromini_B	ANCESTRAL SPECIES	32	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a ##22	ENSGT00900000141362.a.b.c.b	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B.e.a	ENSGT00940000153947.B.f	ENSGT00940000155542.a	ENSGT00390000015466
Zebra mbuna	MODERN SPECIES	1099	coa6 (ENSMZEG00005015021)	slc13a4 (ENSMZEG00005015009)	zgc:162331 (ENSMZEG00005015004)	BMAL2 (ENSMZEG00005014994)	stk38l (ENSMZEG00005014981)	med21 (ENSMZEG00005014971)	fgfr1op2 (ENSMZEG00005014955)	TM7SF3 (ENSMZEG00005014944)	gas2l3 (ENSMZEG00005014932)	arid2 (ENSMZEG00005014910)	ENSMZEG00005014878	slc38a2 (ENSMZEG00005014826)	slc38a4 (ENSMZEG00005014625)	AMIGO2 (ENSMZEG00005014613)	ANO4 (ENSMZEG00005014601)	NXPE3 (ENSMZEG00005014593) ##22	ccl25b (ENSMZEG00005014587)	ENSMZEG00005014582	ENSMZEG00005014576	ENSMZEG00005014574	ENSMZEG00005014569	ENSMZEG00005014562	TTC22 (ENSMZEG00005014557)	lurap1 (ENSMZEG00005014553)	lepr (ENSMZEG00005014517)	DNAJC6 (ENSMZEG00005014454)	ak4 (ENSMZEG00005014435)	jak1 (ENSMZEG00005014405)	RAVER2 (ENSMZEG00005014386)	CACHD1 (ENSMZEG00005014345)	ENSMZEG00005014314
Eastern happy	MODERN SPECIES	8	coa6 (ENSACLG00000003382)	slc13a4 (ENSACLG00000003198)	ENSACLG00000003159	BMAL2 (ENSACLG00000003135)	stk38l (ENSACLG00000003108)	med21 (ENSACLG00000003091)	fgfr1op2 (ENSACLG00000003074)	TM7SF3 (ENSACLG00000003053)	gas2l3 (ENSACLG00000003042)	arid2 (ENSACLG00000002996)	ENSACLG00000002985	slc38a2 (ENSACLG00000002877)	slc38a4 (ENSACLG00000002621)	ENSACLG00000002578	ANO4 (ENSACLG00000002503)	NXPE3 (ENSACLG00000002491) ##22	ENSACLG00000002484	ccl25b (ENSACLG00000002474)	ENSACLG00000002469	ENSACLG00000002468	ccl25b (ENSACLG00000002259)	ENSACLG00000002234	ENSACLG00000002218	ENSACLG00000002207	ENSACLG00000002180	ENSACLG00000002167	ENSACLG00000002111	TTC22 (ENSACLG00000002093)	lurap1 (ENSACLG00000002086)	lepr (ENSACLG00000002030)	DNAJC6 (ENSACLG00000001981)
P. nyererei	MODERN SPECIES	425	coa6 (ENSPNYG00000014994)	slc13a4 (ENSPNYG00000014890)	zgc:162331 (ENSPNYG00000014841)	BMAL2 (ENSPNYG00000014760)	stk38l (ENSPNYG00000014721)	med21 (ENSPNYG00000014699)	fgfr1op2 (ENSPNYG00000014678)	TM7SF3 (ENSPNYG00000014644)	gas2l3 (ENSPNYG00000014617)	arid2 (ENSPNYG00000014572)	ENSPNYG00000014553	slc38a2 (ENSPNYG00000014524)	slc38a4 (ENSPNYG00000014426)	AMIGO2 (ENSPNYG00000014386)	ANO4 (ENSPNYG00000014338)	NXPE3 (ENSPNYG00000014322) ##22	ccl25b (ENSPNYG00000014303)	TTC22 (ENSPNYG00000014284)	lurap1 (ENSPNYG00000014267)	lepr (ENSPNYG00000014229)	DNAJC6 (ENSPNYG00000014192)	ak4 (ENSPNYG00000014169)	jak1 (ENSPNYG00000013970)	ENSPNYG00000013951	ENSPNYG00000013943	CACHD1 (ENSPNYG00000013908)
Lyretail cichlid	MODERN SPECIES	452	coa6 (ENSNBRG00000017744)	ENSNBRG00000017727	zgc:162331 (ENSNBRG00000017703)	BMAL2 (ENSNBRG00000017680)	stk38l (ENSNBRG00000017648)	med21 (ENSNBRG00000017627)	fgfr1op2 (ENSNBRG00000017612)	TM7SF3 (ENSNBRG00000017579)	gas2l3 (ENSNBRG00000017561)	arid2 (ENSNBRG00000017384)	ENSNBRG00000017361	slc38a2 (ENSNBRG00000017344)	slc38a4 (ENSNBRG00000017301)	ENSNBRG00000017277	ANO4 (ENSNBRG00000017237)	NXPE3 (ENSNBRG00000017221) ##22
Midas cichlid	MODERN SPECIES	1517																ENSACIG00000023384 ##22	ENSACIG00000023386
Cichlidae	ANCESTRAL SPECIES	401																ENSGT00950000182866.D.d.a.c.b.a.a.b.b ##22	ENSGT00940000165853
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a ##22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a ##22
Haplochromini	DUPLICATION
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a.a ##22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a.a ##22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a.a ##22
Zebra mbuna	MODERN SPECIES	738																NXPE3 (ENSMZEG00005028153) ##22
Eastern happy	MODERN SPECIES	8	ENSACLG00000011781	ENSACLG00000011789	ENSACLG00000011798	slc26a5 (ENSACLG00000011906)	psmc2 (ENSACLG00000012004)	dnajc2 (ENSACLG00000012086)	pmpcb (ENSACLG00000012142)	phax (ENSACLG00000012222)	ENSACLG00000012233	ENSACLG00000012278	ENSACLG00000012279	kcnc2 (ENSACLG00000012284)	ENSACLG00000012330	cmah (ENSACLG00000012342)	ENSACLG00000012398	NXPE3 (ENSACLG00000012410) ##22	ENSACLG00000012466	slc26a3.1 (ENSACLG00000012522)	cbll1 (ENSACLG00000012549)	ppp6r2a (ENSACLG00000012584)	sbf1 (ENSACLG00000012681)	adm2a (ENSACLG00000013101)	ENSACLG00000013112	glt8d2 (ENSACLG00000013119)	ankrd16 (ENSACLG00000013151)	gdi2 (ENSACLG00000013190)	asb13a.1 (ENSACLG00000013222)	ENSACLG00000013237	net1 (ENSACLG00000013251)	mkln1 (ENSACLG00000013650)	podxl (ENSACLG00000013687)
Burton s mouthbrooder	MODERN SPECIES	703													kcnc2 (ENSHBUG00000001183)	ENSHBUG00000002709	cmah (ENSHBUG00000002702)	NXPE3 (ENSHBUG00000002681) ##22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a.b ##22
Burton s mouthbrooder	MODERN SPECIES	450	SLC4A11 (ENSHBUG00000006071)	ENSHBUG00000006093	smyd5 (ENSHBUG00000006142)	sfxn5b (ENSHBUG00000006150)	ENSHBUG00000006159	BEND4 (ENSHBUG00000006173)	shisa3 (ENSHBUG00000006187)	atp8a1 (ENSHBUG00000006347)	GRXCR1 (ENSHBUG00000006390)	slc30a9 (ENSHBUG00000006489)	gsr (ENSHBUG00000006561)	ENSHBUG00000006579	ENSHBUG00000006585	ENSHBUG00000006599	HS3ST1 (ENSHBUG00000006610)	ENSHBUG00000006628 ##22	RAB28 (ENSHBUG00000006668)	nkx3-2 (ENSHBUG00000006681)	ENSHBUG00000006705	ENSHBUG00000006778	aurkb (ENSHBUG00000006934)	ENSHBUG00000006971	COPS6 (ENSHBUG00000007000)	ENSHBUG00000007006	mcm7 (ENSHBUG00000007062)	ENSHBUG00000007105	gpc2 (ENSHBUG00000007118)	ENSHBUG00000007127	ENSHBUG00000007143
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a.b ##22
P. nyererei	MODERN SPECIES	1164																ENSPNYG00000023592 ##22	ENSPNYG00000023593 ##22
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.a.b ##22
Zebra mbuna	MODERN SPECIES	1099	EPHB1 (ENSMZEG00005006714)	si:ch211-262h13.5 (ENSMZEG00005006736)	gpsm2l (ENSMZEG00005006752)	MCOLN3 (ENSMZEG00005006840)	ENSMZEG00005006864	SYDE2 (ENSMZEG00005006891)	zgc:65873 (ENSMZEG00005006908)	ENSMZEG00005006916	ENSMZEG00005006923	ENSMZEG00005006939	ENSMZEG00005006949	ccn1 (ENSMZEG00005006957)	ENSMZEG00005006970	ENSMZEG00005006977	cmah (ENSMZEG00005006986)	NXPE3 (ENSMZEG00005007013) ##22	ENSMZEG00005007031	ENSMZEG00005007054	ENSMZEG00005007081	ENSMZEG00005007113	slc26a3.1 (ENSMZEG00005007189)	cbll1 (ENSMZEG00005007358)	ppp6r2a (ENSMZEG00005007382)	sbf1 (ENSMZEG00005007421)	adm2a (ENSMZEG00005007470)	glt8d2 (ENSMZEG00005007483)	ankrd16 (ENSMZEG00005007496)	gdi2 (ENSMZEG00005007528)	asb13a.1 (ENSMZEG00005007562)	ENSMZEG00005007582	net1 (ENSMZEG00005007604)
Pseudocrenilabrinae	ANCESTRAL SPECIES	54	ENSGT01050000244843.c.a.b.a.a.a.b.a.a.b.a.f.b	ENSGT00940000160928.n.b.c.b.h	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j.x.a	ENSGT00970000193619	ENSGT00940000158122	ENSGT00940000157467.v	ENSGT00940000154411.k	ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a	ENSGT00510000047351.b	ENSGT00390000011679	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.b ##22	ENSGT01000000217412
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	15	ENSONIG00000030467	ENSONIG00000041472	ENSONIG00000006945	ENSONIG00000036156	ENSONIG00000014109	ENSONIG00000035795	fgb (ENSONIG00000014105)	ENSONIG00000014102	npy2rl (ENSONIG00000032515)	rbm46 (ENSONIG00000037300)	lratb.2 (ENSONIG00000014094)	ENSONIG00000038363	ENSONIG00000027775	ENSONIG00000031131	NXPE3 (ENSONIG00000008951) ##22	NXPE3 (ENSONIG00000013641) ##22	ENSONIG00000013642	ENSONIG00000041598	ENSONIG00000031103	ENSONIG00000040054	ENSONIG00000028608	ENSONIG00000033537	ENSONIG00000013711	ENSONIG00000041140	ENSONIG00000036397	ENSONIG00000027463	ENSONIG00000029746	ENSONIG00000043228	wdr55 (ENSONIG00000013649)	ENSONIG00000042801	ENSONIG00000043000
Nile tilapia	MODERN SPECIES	15	ENSONIG00000037632	ENSONIG00000030467	ENSONIG00000041472	ENSONIG00000006945	ENSONIG00000036156	ENSONIG00000014109	ENSONIG00000035795	fgb (ENSONIG00000014105)	ENSONIG00000014102	npy2rl (ENSONIG00000032515)	rbm46 (ENSONIG00000037300)	lratb.2 (ENSONIG00000014094)	ENSONIG00000038363	ENSONIG00000027775	ENSONIG00000031131	NXPE3 (ENSONIG00000008951) ##22	NXPE3 (ENSONIG00000013641) ##22	ENSONIG00000013642	ENSONIG00000041598	ENSONIG00000031103	ENSONIG00000040054	ENSONIG00000028608	ENSONIG00000033537	ENSONIG00000013711	ENSONIG00000041140	ENSONIG00000036397	ENSONIG00000027463	ENSONIG00000029746	ENSONIG00000043228	wdr55 (ENSONIG00000013649)	ENSONIG00000042801
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	54	ENSGT01050000244843.c.a.b.a.a.a.b.a.a.b.a.f.b	ENSGT00940000160928.n.b.c.b.h	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j.x.a.a	ENSGT00970000193619	ENSGT00940000158122	ENSGT00940000157467.v	ENSGT00940000154411.k	ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a	ENSGT00510000047351.b	ENSGT00390000011679	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.b ##22	ENSGT01000000217412	ENSGT00940000153727.a	ENSGT00940000167699	ENSGT00390000005844.a.a.k.b	ENSGT00940000174394	ENSGT01060000248726	ENSGT00390000005844.a.a.k.a	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000161319	ENSGT00940000175283	ENSGT00940000154950.y.b	ENSGT00940000157370.a	ENSGT00940000167339
Haplochromini	ANCESTRAL SPECIES	64		ENSGT00940000160928.n.b.c.b.h	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j.x.a.a	ENSGT00970000193619	ENSGT00940000158122	ENSGT00940000157467.v	ENSGT00940000154411.k	ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a	ENSGT00510000047351.b	ENSGT00390000011679	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.b ##22	ENSGT01000000217412	ENSGT00940000153727.a	ENSGT00940000167699	ENSGT01060000248726	ENSGT00390000005844.a.a.k.a	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000161319	ENSGT00940000175283	ENSGT00940000154950.y.b	ENSGT00940000157370.a	ENSGT00940000167339.n.b	ENSGT00940000177560	ENSGT00940000165048.a
Haplochromini_A	ANCESTRAL SPECIES	68	ENSGT00940000160928.n.b.c.a.a	ENSGT00940000155905.b	ENSGT00390000013075.b	ENSGT00390000005182.j.x.a.b	ENSGT00970000193619	ENSGT00940000158122	ENSGT00940000157467.v	ENSGT00940000154411.k	ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a	ENSGT00510000047351.b	ENSGT00390000011679	ENSGT00940000160560.b.f.a.b.a.b.g.a.a.b.a	ENSGT00940000164918.d	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.b ##22	ENSGT01000000217412	ENSGT00940000153727.a	ENSGT00940000167699	ENSGT01060000248726	ENSGT00390000005844.a.a.k.a	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000161319	ENSGT00940000175283	ENSGT00940000154950.y.b	ENSGT00940000157370.a	ENSGT00940000167339.n.b	ENSGT00940000177560	ENSGT00940000165048.a
Haplochromini_B	ANCESTRAL SPECIES	72	ENSGT00390000005182.j.x.b.a	ENSGT00390000005182.j.w.b	ENSGT00940000156323.c.b	ENSGT00970000193500	ENSGT00940000158122	ENSGT00940000157467.v	ENSGT00940000154411.k	ENSGT00940000155973.b.c	ENSGT00940000155927	ENSGT00940000165274.a	ENSGT00510000047351.b	ENSGT00390000011679.c	ENSGT00940000177078.E.c	ENSGT00940000160560.b.f.a.b.a.b.g.a.a.b.a	ENSGT00940000164918.d	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.a.b ##22	ENSGT01000000217412	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.b.a.b.b.b.a.b	ENSGT00950000182812.B.a.a.p.b	ENSGT00940000156038.a.b.b.i.a.b.a.b.c.a.b	ENSGT00940000153727.a	ENSGT00940000167699	ENSGT01060000248726	ENSGT00390000005844.a.a.k.a	ENSGT00940000154706.rb.a	ENSGT00950000182917.a.a.a.a	ENSGT00930000151042	ENSGT00940000161319	ENSGT00940000175283	ENSGT00940000154950.y.b	ENSGT00940000157370.a
Zebra mbuna	MODERN SPECIES	1106	ENSMZEG00005027829	tlr2 (ENSMZEG00005027830)	ENSMZEG00005027833	ENSMZEG00005027838	fgb (ENSMZEG00005027840)	fga (ENSMZEG00005027843)	ENSMZEG00005027844	npy2rl (ENSMZEG00005027846)	rbm46 (ENSMZEG00005027849)	lratb.2 (ENSMZEG00005027853)	LRAT (ENSMZEG00005027855)	ENSMZEG00005027857	ENSMZEG00005027860	ENSMZEG00005027862	ENSMZEG00005027865	NXPE3 (ENSMZEG00005027868) ##22	ENSMZEG00005027870	ENSMZEG00005027871	ENSMZEG00005027872	ENSMZEG00005027873	ENSMZEG00005027880	wdr55 (ENSMZEG00005027881)	ENSMZEG00005027882	ENSMZEG00005027884	ENSMZEG00005027887	ENSMZEG00005027890	ENSMZEG00005027892	ENSMZEG00005027900	ENSMZEG00005027903	ENSMZEG00005027904	aimp1b (ENSMZEG00005027905)
Eastern happy	MODERN SPECIES	15	fgb (ENSACLG00000015912)	fga (ENSACLG00000015964)	ENSACLG00000015989	npy2rl (ENSACLG00000016028)	rbm46 (ENSACLG00000016153)	lratb.2 (ENSACLG00000016190)	LRAT (ENSACLG00000016224)	ENSACLG00000016226	ENSACLG00000016335	ENSACLG00000016377	ENSACLG00000016390	ENSACLG00000016433	ENSACLG00000016487	ENSACLG00000016640	ENSACLG00000016697	NXPE3 (ENSACLG00000016722) ##22	ENSACLG00000016751	ENSACLG00000016766	ENSACLG00000016791	ENSACLG00000016793	ENSACLG00000016829	ENSACLG00000017151	wdr55 (ENSACLG00000017164)	ENSACLG00000017237	ENSACLG00000017677	ENSACLG00000018520	ENSACLG00000018665	ENSACLG00000018697	ENSACLG00000018730	ENSACLG00000018842	ENSACLG00000018931
P. nyererei	MODERN SPECIES	785															ENSPNYG00000006539	NXPE3 (ENSPNYG00000006562) ##22	ENSPNYG00000006620
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.b ##22
Nile tilapia	MODERN SPECIES	8	psmc2 (ENSONIG00000008060)	dnajc2 (ENSONIG00000008062)	pmpcb (ENSONIG00000008066)	phax (ENSONIG00000021083)	ENSONIG00000033844	ENSONIG00000038268	ENSONIG00000035368	kcnc2 (ENSONIG00000034861)	ENSONIG00000037211	ENSONIG00000036959	kcnc2 (ENSONIG00000008069)	ENSONIG00000008071	cmah (ENSONIG00000008074)	ENSONIG00000008079	ENSONIG00000040389	ENSONIG00000038443 ##22	ENSONIG00000035539	ENSONIG00000037117	slc26a3.1 (ENSONIG00000011920)	cbll1 (ENSONIG00000036834)	ppp6r2a (ENSONIG00000011925)	sbf1 (ENSONIG00000011932)	adm2a (ENSONIG00000042652)	ENSONIG00000027924	ENSONIG00000028745	glt8d2 (ENSONIG00000011950)	ankrd16 (ENSONIG00000033592)	gdi2 (ENSONIG00000011955)	asb13a.1 (ENSONIG00000011962)	ENSONIG00000038690	net1 (ENSONIG00000011964)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.b ##22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.b ##22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.b.b.b ##22
P. nyererei	MODERN SPECIES	1164															ENSPNYG00000023592 ##22	ENSPNYG00000023593 ##22
Lyretail cichlid	MODERN SPECIES	528					slc26a5 (ENSNBRG00000009221)	psmc2 (ENSNBRG00000009236)	ENSNBRG00000009211	ENSNBRG00000009199	pmpcb (ENSNBRG00000009168)	phax (ENSNBRG00000009151)	ENSNBRG00000009145	kcnc2 (ENSNBRG00000009105)	ENSNBRG00000009098	ENSNBRG00000009089	cmah (ENSNBRG00000009063)	NXPE3 (ENSNBRG00000009030) ##22	GJA1 (ENSNBRG00000009020)
Midas cichlid	MODERN SPECIES	1020																NXPE3 (ENSACIG00000023787) ##22	ENSACIG00000023786	krr1 (ENSACIG00000023780)	ENSACIG00000023774	ENSACIG00000023768	SYT14 (ENSACIG00000023766)	sdsl (ENSACIG00000023761)	ENSACIG00000023758	ppp1r13ba (ENSACIG00000023754)	ptp4a2a (ENSACIG00000023751)	gjb9a (ENSACIG00000023748)	marcksl1a (ENSACIG00000023744)	bsdc1 (ENSACIG00000023741)	olig4 (ENSACIG00000023738)	FNDC5 (ENSACIG00000023735)	ENSACIG00000023724
Pomacentridae	ANCESTRAL SPECIES	65	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917.f	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000160560.b.f.a.b.a.b	ENSGT00940000157713
Pomacentridae_A	DUPLICATION
Pomacentridae_A	ANCESTRAL SPECIES	64	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917.f	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.c ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000160560.b.f.a.b.a.b	ENSGT00940000157713
Amphiprion	DUPLICATION
Amphiprion	DUPLICATION
Amphiprion	DUPLICATION
Amphiprion	DUPLICATION
Amphiprion	ANCESTRAL SPECIES	63	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917.f	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.c.b ##22	ENSGT00940000164836.p	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.b ##22	ENSGT00940000164836.o	ENSGT01070000253760.b.b.a.a.c.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000181475	ENSGT00510000047886.b
Clown anemonefish	MODERN SPECIES	1954															ANO4 (ENSAOCG00000009425)	NXPE3 (ENSAOCG00000009456) ##22	NXPE3 (ENSAOCG00000009474) ##22	NXPE3 (ENSAOCG00000009487) ##22	ENSAOCG00000009506	ENSAOCG00000009551	ENSAOCG00000009583	ENSAOCG00000001859	apex1 (ENSAOCG00000009649)	osgep (ENSAOCG00000009703)	si:ch211-214j24.10 (ENSAOCG00000009719)	ENSAOCG00000009735	ENSAOCG00000009749
Orange clownfish	MODERN SPECIES	13	BMAL2 (ENSAPEG00000022204)	stk38l (ENSAPEG00000022175)	med21 (ENSAPEG00000022165)	fgfr1op2 (ENSAPEG00000022152)	TM7SF3 (ENSAPEG00000022137)	ENSAPEG00000022114	gas2l3 (ENSAPEG00000022059)	arid2 (ENSAPEG00000021970)	ENSAPEG00000021938	slc38a2 (ENSAPEG00000021879)	slc38a4 (ENSAPEG00000021848)	ENSAPEG00000021839	ENSAPEG00000021805	ANO4 (ENSAPEG00000021738)	ENSAPEG00000021715 ##22	NXPE3 (ENSAPEG00000021701) ##22	ENSAPEG00000021673	ENSAPEG00000021639	NXPE3 (ENSAPEG00000021624) ##22	ENSAPEG00000021605	NXPE3 (ENSAPEG00000021561) ##22	ENSAPEG00000021531	ENSAPEG00000021516	ENSAPEG00000021505	ENSAPEG00000021476	apex1 (ENSAPEG00000021453)	osgep (ENSAPEG00000021415)	si:ch211-214j24.10 (ENSAPEG00000021403)	ENSAPEG00000021383	ENSAPEG00000021351	ENSAPEG00000021336
Amphiprion	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.a.b ##22
Orange clownfish	MODERN SPECIES	13	ENSAPEG00000022114	gas2l3 (ENSAPEG00000022059)	arid2 (ENSAPEG00000021970)	ENSAPEG00000021938	slc38a2 (ENSAPEG00000021879)	slc38a4 (ENSAPEG00000021848)	ENSAPEG00000021839	ENSAPEG00000021805	ANO4 (ENSAPEG00000021738)	ENSAPEG00000021715 ##22	NXPE3 (ENSAPEG00000021701) ##22	ENSAPEG00000021673	ENSAPEG00000021639	NXPE3 (ENSAPEG00000021624) ##22	ENSAPEG00000021605	NXPE3 (ENSAPEG00000021561) ##22	ENSAPEG00000021531	ENSAPEG00000021516	ENSAPEG00000021505	ENSAPEG00000021476	apex1 (ENSAPEG00000021453)	osgep (ENSAPEG00000021415)	si:ch211-214j24.10 (ENSAPEG00000021403)	ENSAPEG00000021383	ENSAPEG00000021351	ENSAPEG00000021336	nav3 (ENSAPEG00000021186)	ENSAPEG00000021157	ENSAPEG00000021144	ENSAPEG00000021090	ENSAPEG00000021053
Amphiprion	ANCESTRAL SPECIES	63	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917.f	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.c.b ##22	ENSGT00940000164836.p	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.b ##22	ENSGT00940000164836.o	ENSGT01070000253760.b.b.a.a.c.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000181475	ENSGT00510000047886.b	ENSGT00940000160560.b.f.a.b.a.b	ENSGT00940000157713	ENSGT00940000154980
Orange clownfish	MODERN SPECIES	13	ENSAPEG00000021144	ENSAPEG00000021157	nav3 (ENSAPEG00000021186)	ENSAPEG00000021336	ENSAPEG00000021351	ENSAPEG00000021383	si:ch211-214j24.10 (ENSAPEG00000021403)	osgep (ENSAPEG00000021415)	apex1 (ENSAPEG00000021453)	ENSAPEG00000021476	ENSAPEG00000021505	ENSAPEG00000021516	ENSAPEG00000021531	NXPE3 (ENSAPEG00000021561) ##22	ENSAPEG00000021605	NXPE3 (ENSAPEG00000021624) ##22	ENSAPEG00000021639	ENSAPEG00000021673	NXPE3 (ENSAPEG00000021701) ##22	ENSAPEG00000021715 ##22	ANO4 (ENSAPEG00000021738)	ENSAPEG00000021805	ENSAPEG00000021839	slc38a4 (ENSAPEG00000021848)	slc38a2 (ENSAPEG00000021879)	ENSAPEG00000021938	arid2 (ENSAPEG00000021970)	gas2l3 (ENSAPEG00000022059)	ENSAPEG00000022114	TM7SF3 (ENSAPEG00000022137)	fgfr1op2 (ENSAPEG00000022152)
Clown anemonefish	MODERN SPECIES	3366																ENSAOCG00000014113 ##22
Amphiprion	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.b ##22
Clown anemonefish	MODERN SPECIES	1954														ANO4 (ENSAOCG00000009425)	NXPE3 (ENSAOCG00000009456) ##22	NXPE3 (ENSAOCG00000009474) ##22	NXPE3 (ENSAOCG00000009487) ##22	ENSAOCG00000009506	ENSAOCG00000009551	ENSAOCG00000009583	ENSAOCG00000001859	apex1 (ENSAOCG00000009649)	osgep (ENSAOCG00000009703)	si:ch211-214j24.10 (ENSAOCG00000009719)	ENSAOCG00000009735	ENSAOCG00000009749
Amphiprion	ANCESTRAL SPECIES	63	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917.f	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.c.b ##22	ENSGT00940000164836.p	ENSGT00950000182866.D.d.a.c.b.a.a.c.a.a.b ##22	ENSGT00940000164836.o	ENSGT01070000253760.b.b.a.a.c.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000181475	ENSGT00510000047886.b	ENSGT00940000160560.b.f.a.b.a.b
Clown anemonefish	MODERN SPECIES	1954													ANO4 (ENSAOCG00000009425)	NXPE3 (ENSAOCG00000009456) ##22	NXPE3 (ENSAOCG00000009474) ##22	NXPE3 (ENSAOCG00000009487) ##22	ENSAOCG00000009506	ENSAOCG00000009551	ENSAOCG00000009583	ENSAOCG00000001859	apex1 (ENSAOCG00000009649)	osgep (ENSAOCG00000009703)	si:ch211-214j24.10 (ENSAOCG00000009719)	ENSAOCG00000009735	ENSAOCG00000009749
Orange clownfish	MODERN SPECIES	13	zgc:162331 (ENSAPEG00000022255)	BMAL2 (ENSAPEG00000022204)	stk38l (ENSAPEG00000022175)	med21 (ENSAPEG00000022165)	fgfr1op2 (ENSAPEG00000022152)	TM7SF3 (ENSAPEG00000022137)	ENSAPEG00000022114	gas2l3 (ENSAPEG00000022059)	arid2 (ENSAPEG00000021970)	ENSAPEG00000021938	slc38a2 (ENSAPEG00000021879)	slc38a4 (ENSAPEG00000021848)	ENSAPEG00000021839	ENSAPEG00000021805	ANO4 (ENSAPEG00000021738)	ENSAPEG00000021715 ##22	NXPE3 (ENSAPEG00000021701) ##22	ENSAPEG00000021673	ENSAPEG00000021639	NXPE3 (ENSAPEG00000021624) ##22	ENSAPEG00000021605	NXPE3 (ENSAPEG00000021561) ##22	ENSAPEG00000021531	ENSAPEG00000021516	ENSAPEG00000021505	ENSAPEG00000021476	apex1 (ENSAPEG00000021453)	osgep (ENSAPEG00000021415)	si:ch211-214j24.10 (ENSAPEG00000021403)	ENSAPEG00000021383	ENSAPEG00000021351
Spiny chromis	MODERN SPECIES	122																ENSAPOG00000010126 ##22	ENSAPOG00000010173	slc9a8 (ENSAPOG00000010196)	b4galt5 (ENSAPOG00000010247)	EMILIN3 (ENSAPOG00000010265)	aar2 (ENSAPOG00000010290)	prpf6 (ENSAPOG00000010395)	SAMD10 (ENSAPOG00000010444)	ZNF512B (ENSAPOG00000010492)	uckl1a (ENSAPOG00000010584)	ZBTB46 (ENSAPOG00000010632)	ENSAPOG00000010658	ENSAPOG00000010688	nkain4 (ENSAPOG00000010730)	ENSAPOG00000010753	YTHDF1 (ENSAPOG00000010796)
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.d ##22
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	1252										zbtb49 (ENSAPOG00000018248)	lyar (ENSAPOG00000018258)	TMEM128 (ENSAPOG00000018341)	OTOP1 (ENSAPOG00000018367)	ENSAPOG00000018380	ENSAPOG00000018395	NXPE3 (ENSAPOG00000018421) ##22
Spiny chromis	MODERN SPECIES	1948																NXPE3 (ENSAPOG00000003001) ##22	ENSAPOG00000002961	matn4 (ENSAPOG00000002928)
Atherinomorphae	ANCESTRAL SPECIES	21	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836.l	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Cyprinodontiformes	ANCESTRAL SPECIES	19	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836.l	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Cyprinodontoidei	DUPLICATION
Cyprinodontoidei	DUPLICATION
Cyprinodontoidei	DUPLICATION
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a ##22
Poeciliinae	DUPLICATION
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22
Poecilia	ANCESTRAL SPECIES	47	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	84	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.a	ENSGT00940000155486.l.b.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a.a.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.c ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22
Sailfin molly	MODERN SPECIES	3115															ENSPLAG00000020358 ##22	NXPE3 (ENSPLAG00000020380) ##22	NXPE3 (ENSPLAG00000020390) ##22
Amazon molly	MODERN SPECIES	769						slc38a2 (ENSPFOG00000022861)	slc38a2 (ENSPFOG00000010414)	slc38a4 (ENSPFOG00000010120)	ENSPFOG00000010078	ENSPFOG00000023151	ANO4 (ENSPFOG00000009519)	NXPE3 (ENSPFOG00000009412) ##22	ENSPFOG00000022830 ##22	NXPE3 (ENSPFOG00000009353) ##22	NXPE3 (ENSPFOG00000023695) ##22	NXPE3 (ENSPFOG00000009303) ##22	NXPE3 (ENSPFOG00000009168) ##22
NAME_6	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.b ##22
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	4126																ENSPLAG00000002989 ##22
Sailfin molly	MODERN SPECIES	4140																ENSPLAG00000002854 ##22
Amazon molly	MODERN SPECIES	1472																NXPE3 (ENSPFOG00000021731) ##22
Guppy	MODERN SPECIES	454	TM7SF3 (ENSPREG00000015032)	gas2l3 (ENSPREG00000015012)	arid2 (ENSPREG00000014960)	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303	apex1 (ENSPREG00000014298)	osgep (ENSPREG00000014273)	si:ch211-214j24.10 (ENSPREG00000014266)
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.b ##22
Platyfish	MODERN SPECIES	8	slc38a2 (ENSXMAG00000024283)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000028934)	slc38a4 (ENSXMAG00000006133)	ENSXMAG00000028370	ANO4 (ENSXMAG00000006134)	ENSXMAG00000006167 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000021808 ##22	NXPE3 (ENSXMAG00000008531) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000027145) ##22	ENSXMAG00000027183 ##22	ENSXMAG00000006179	ENSXMAG00000024972	ENSXMAG00000024112	SELENOO (ENSXMAG00000006183)	ENSXMAG00000025951	apex1 (ENSXMAG00000006195)	osgep (ENSXMAG00000006199)	si:ch211-214j24.10 (ENSXMAG00000006212)	ENSXMAG00000022026	nav3 (ENSXMAG00000006213)	ENSXMAG00000006242	e2f7 (ENSXMAG00000006252)	csrp2 (ENSXMAG00000006257)	zdhhc17 (ENSXMAG00000006274)
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.b ##22
Guppy	MODERN SPECIES	454	arid2 (ENSPREG00000014960)	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303	apex1 (ENSPREG00000014298)	osgep (ENSPREG00000014273)	si:ch211-214j24.10 (ENSPREG00000014266)	ENSPREG00000014264	nav3 (ENSPREG00000014206)
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a ##22
Sheepshead minnow	MODERN SPECIES	1092										slc38a2 (ENSCVAG00000016109)	slc38a2 (ENSCVAG00000015856)	slc38a4 (ENSCVAG00000015850)	AMIGO2 (ENSCVAG00000015822)	ANO4 (ENSCVAG00000000976)	NXPE3 (ENSCVAG00000015758) ##22	NXPE3 (ENSCVAG00000015747) ##22
Mummichog	MODERN SPECIES	465												ttc27 (ENSFHEG00000005135)	MFAP4 (ENSFHEG00000005037)	ENSFHEG00000005011	ENSFHEG00000004991	ENSFHEG00000004946 ##22
Cyprinodontoidei	DUPLICATION
Cyprinodontoidei	DUPLICATION
Cyprinodontoidei	ANCESTRAL SPECIES	193															ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00940000165853
NAME_4	ANCESTRAL SPECIES	714															ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22
Sheepshead minnow	DUPLICATION
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	982														sri (ENSCVAG00000014572)	NXPE3 (ENSCVAG00000014583) ##22	NXPE3 (ENSCVAG00000000373) ##22	ENSCVAG00000014633	ENSCVAG00000014743	ENSCVAG00000014768	supt3h (ENSCVAG00000014780)	cdc5l (ENSCVAG00000014810)	ENSCVAG00000014850
Sheepshead minnow	MODERN SPECIES	1575															ENSCVAG00000012109 ##22	NXPE3 (ENSCVAG00000012102) ##22	ENSCVAG00000012076	krr1 (ENSCVAG00000012029)
Sheepshead minnow	MODERN SPECIES	1575																ENSCVAG00000012109 ##22	NXPE3 (ENSCVAG00000012102) ##22	ENSCVAG00000012076	krr1 (ENSCVAG00000012029)
Poeciliinae	ANCESTRAL SPECIES	88														ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22
Poecilia	ANCESTRAL SPECIES	47	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	84	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.a	ENSGT00940000155486.l.b.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a.a.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.c ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22
Amazon molly	MODERN SPECIES	769									slc38a2 (ENSPFOG00000022861)	slc38a2 (ENSPFOG00000010414)	slc38a4 (ENSPFOG00000010120)	ENSPFOG00000010078	ENSPFOG00000023151	ANO4 (ENSPFOG00000009519)	NXPE3 (ENSPFOG00000009412) ##22	ENSPFOG00000022830 ##22	NXPE3 (ENSPFOG00000009353) ##22	NXPE3 (ENSPFOG00000023695) ##22	NXPE3 (ENSPFOG00000009303) ##22	NXPE3 (ENSPFOG00000009168) ##22
Sailfin molly	MODERN SPECIES	917											slc38a2 (ENSPLAG00000012070)	slc38a4 (ENSPLAG00000012083)	ENSPLAG00000012094	ANO4 (ENSPLAG00000012173)	NXPE3 (ENSPLAG00000012195) ##22	NXPE3 (ENSPLAG00000012221) ##22	NXPE3 (ENSPLAG00000012279) ##22
NAME_6	ANCESTRAL SPECIES	84														ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.c ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00940000158600	ENSGT00950000183146.a.a	ENSGT00940000158917	ENSGT00940000155486.l.b.a.a.a	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a.b	ENSGT00940000155486.l.a.a	ENSGT00950000183205.b.a.b.a.b	ENSGT00390000016138	ENSGT00940000159389	ENSGT00390000008702	ENSGT00390000018003.b
Amazon molly	MODERN SPECIES	169																ENSPFOG00000023899 ##22
Sailfin molly	MODERN SPECIES	3115														NXPE3 (ENSPLAG00000020390) ##22	NXPE3 (ENSPLAG00000020380) ##22	ENSPLAG00000020358 ##22
Guppy	DUPLICATION
Guppy	MODERN SPECIES	454	osgep (ENSPREG00000014273)	apex1 (ENSPREG00000014298)	ENSPREG00000014303	SELENOO (ENSPREG00000014359)	zgc:173709 (ENSPREG00000014399)	ENSPREG00000014429	ENSPREG00000014456	ENSPREG00000014471	ENSPREG00000014487	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014534) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014596) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014687 ##22	ANO4 (ENSPREG00000014703)	ENSPREG00000014739	slc38a4 (ENSPREG00000014746)	slc38a2 (ENSPREG00000014787)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014855)	ENSPREG00000014901	arid2 (ENSPREG00000014960)	gas2l3 (ENSPREG00000015012)	TM7SF3 (ENSPREG00000015032)	fgfr1op2 (ENSPREG00000015055)
Guppy	MODERN SPECIES	454	BMAL2 (ENSPREG00000015103)	stk38l (ENSPREG00000015077)	med21 (ENSPREG00000015064)	fgfr1op2 (ENSPREG00000015055)	TM7SF3 (ENSPREG00000015032)	gas2l3 (ENSPREG00000015012)	arid2 (ENSPREG00000014960)	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES	8	nav3 (ENSXMAG00000006213)	ENSXMAG00000022026	si:ch211-214j24.10 (ENSXMAG00000006212)	osgep (ENSXMAG00000006199)	apex1 (ENSXMAG00000006195)	ENSXMAG00000025951	SELENOO (ENSXMAG00000006183)	ENSXMAG00000024112	ENSXMAG00000024972	ENSXMAG00000006179	ENSXMAG00000027183 ##22	NXPE3 (ENSXMAG00000027145) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000008531) ##22	ENSXMAG00000021808 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000006167 ##22	ANO4 (ENSXMAG00000006134)	ENSXMAG00000028370	slc38a4 (ENSXMAG00000006133)	slc38a2 (ENSXMAG00000028934)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000024283)	ENSXMAG00000024232	slc38a2 (ENSXMAG00000020966)	slc38a2 (ENSXMAG00000026557)	ENSXMAG00000027633
Platyfish	MODERN SPECIES	8	arid2 (ENSXMAG00000006636)	ENSXMAG00000021822	ENSXMAG00000027633	slc38a2 (ENSXMAG00000026557)	slc38a2 (ENSXMAG00000020966)	ENSXMAG00000024232	slc38a2 (ENSXMAG00000024283)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000028934)	slc38a4 (ENSXMAG00000006133)	ENSXMAG00000028370	ANO4 (ENSXMAG00000006134)	ENSXMAG00000006167 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000021808 ##22	NXPE3 (ENSXMAG00000008531) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000027145) ##22	ENSXMAG00000027183 ##22	ENSXMAG00000006179	ENSXMAG00000024972	ENSXMAG00000024112	SELENOO (ENSXMAG00000006183)	ENSXMAG00000025951	apex1 (ENSXMAG00000006195)	osgep (ENSXMAG00000006199)	si:ch211-214j24.10 (ENSXMAG00000006212)
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b ##22
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b ##22
Mummichog	MODERN SPECIES	1292														ENSFHEG00000010691	ENSFHEG00000010702	ENSFHEG00000010710 ##22
Sheepshead minnow	MODERN SPECIES	140	lrmp (ENSCVAG00000001695)	SLC5A8 (ENSCVAG00000001706)	UTP20 (ENSCVAG00000001727)	arl1 (ENSCVAG00000001731)	DENND11 (ENSCVAG00000001738)	ENSCVAG00000001751	slc26a5 (ENSCVAG00000001760)	psmc2 (ENSCVAG00000001766)	dnajc2 (ENSCVAG00000001780)	pmpcb (ENSCVAG00000001788)	phax (ENSCVAG00000001794)	kcnc2 (ENSCVAG00000001799)	ENSCVAG00000001803	cmah (ENSCVAG00000001810)	ENSCVAG00000001812	NXPE3 (ENSCVAG00000001817) ##22	CDK16 (ENSCVAG00000001825)	abt1 (ENSCVAG00000001828)	ENSCVAG00000001832	grm6a (ENSCVAG00000001842)	tsr2 (ENSCVAG00000001845)	SRPK3 (ENSCVAG00000001855)	PLXNB3 (ENSCVAG00000001870)	abcd1 (ENSCVAG00000001887)	ENSCVAG00000001895	ENSCVAG00000001900	ENSCVAG00000001909	mecp2 (ENSCVAG00000001916)	ENSCVAG00000001919	FGD1 (ENSCVAG00000001930)	TFE3 (ENSCVAG00000001957)
Poeciliinae	DUPLICATION
Poeciliinae	ANCESTRAL SPECIES	88																ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22
Poecilia	ANCESTRAL SPECIES	47																ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00940000158600	ENSGT00950000183146.a.a	ENSGT00940000158917	ENSGT00940000155486.l.b.a	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.a.b	ENSGT00950000183205.b.a.b.a.b	ENSGT00390000016138	ENSGT00940000159389	ENSGT00390000008702
Guppy	DUPLICATION
Guppy	MODERN SPECIES	454	med21 (ENSPREG00000015064)	fgfr1op2 (ENSPREG00000015055)	TM7SF3 (ENSPREG00000015032)	gas2l3 (ENSPREG00000015012)	arid2 (ENSPREG00000014960)	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303	apex1 (ENSPREG00000014298)
Guppy	MODERN SPECIES	454	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303	apex1 (ENSPREG00000014298)	osgep (ENSPREG00000014273)	si:ch211-214j24.10 (ENSPREG00000014266)	ENSPREG00000014264	nav3 (ENSPREG00000014206)	ENSPREG00000014030
NAME_6	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22
Amazon molly	MODERN SPECIES	527															ENSPFOG00000020200	ENSPFOG00000004578 ##22	ENSPFOG00000004563	NXPE3 (ENSPFOG00000004452) ##22	ENSPFOG00000004427	ENSPFOG00000004420	ENSPFOG00000004353	ENSPFOG00000004244	ENSPFOG00000004206	apex1 (ENSPFOG00000004178)	osgep (ENSPFOG00000004083)	si:ch211-214j24.10 (ENSPFOG00000004046)	nav3 (ENSPFOG00000003407)	ENSPFOG00000003340	e2f7 (ENSPFOG00000003272)	csrp2 (ENSPFOG00000003225)	zdhhc17 (ENSPFOG00000003032)
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES	8	ENSXMAG00000024232	slc38a2 (ENSXMAG00000024283)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000028934)	slc38a4 (ENSXMAG00000006133)	ENSXMAG00000028370	ANO4 (ENSXMAG00000006134)	ENSXMAG00000006167 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000021808 ##22	NXPE3 (ENSXMAG00000008531) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000027145) ##22	ENSXMAG00000027183 ##22	ENSXMAG00000006179	ENSXMAG00000024972	ENSXMAG00000024112	SELENOO (ENSXMAG00000006183)	ENSXMAG00000025951	apex1 (ENSXMAG00000006195)	osgep (ENSXMAG00000006199)	si:ch211-214j24.10 (ENSXMAG00000006212)	ENSXMAG00000022026	nav3 (ENSXMAG00000006213)	ENSXMAG00000006242	e2f7 (ENSXMAG00000006252)	csrp2 (ENSXMAG00000006257)
Platyfish	MODERN SPECIES	8	e2f7 (ENSXMAG00000006252)	ENSXMAG00000006242	nav3 (ENSXMAG00000006213)	ENSXMAG00000022026	si:ch211-214j24.10 (ENSXMAG00000006212)	osgep (ENSXMAG00000006199)	apex1 (ENSXMAG00000006195)	ENSXMAG00000025951	SELENOO (ENSXMAG00000006183)	ENSXMAG00000024112	ENSXMAG00000024972	ENSXMAG00000006179	ENSXMAG00000027183 ##22	NXPE3 (ENSXMAG00000027145) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000008531) ##22	ENSXMAG00000021808 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000006167 ##22	ANO4 (ENSXMAG00000006134)	ENSXMAG00000028370	slc38a4 (ENSXMAG00000006133)	slc38a2 (ENSXMAG00000028934)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000024283)	ENSXMAG00000024232	slc38a2 (ENSXMAG00000020966)
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.b ##22
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.b ##22
NAME_6	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.b ##22
Amazon molly	MODERN SPECIES	769							slc38a2 (ENSPFOG00000022861)	slc38a2 (ENSPFOG00000010414)	slc38a4 (ENSPFOG00000010120)	ENSPFOG00000010078	ENSPFOG00000023151	ANO4 (ENSPFOG00000009519)	NXPE3 (ENSPFOG00000009412) ##22	ENSPFOG00000022830 ##22	NXPE3 (ENSPFOG00000009353) ##22	NXPE3 (ENSPFOG00000023695) ##22	NXPE3 (ENSPFOG00000009303) ##22	NXPE3 (ENSPFOG00000009168) ##22
Cyprinodontoidei	DUPLICATION
Cyprinodontoidei	ANCESTRAL SPECIES	193																ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00940000165853
Poeciliinae	ANCESTRAL SPECIES	88															ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22
Poecilia	ANCESTRAL SPECIES	47															ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00940000158600	ENSGT00950000183146.a.a	ENSGT00940000158917	ENSGT00940000155486.l.b.a	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.a.b	ENSGT00950000183205.b.a.b.a.b	ENSGT00390000016138	ENSGT00940000159389	ENSGT00390000008702	ENSGT00390000018003.b
Guppy	DUPLICATION
Guppy	MODERN SPECIES	454	ENSPREG00000014264	si:ch211-214j24.10 (ENSPREG00000014266)	osgep (ENSPREG00000014273)	apex1 (ENSPREG00000014298)	ENSPREG00000014303	SELENOO (ENSPREG00000014359)	zgc:173709 (ENSPREG00000014399)	ENSPREG00000014429	ENSPREG00000014456	ENSPREG00000014471	ENSPREG00000014487	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014534) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014596) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014687 ##22	ANO4 (ENSPREG00000014703)	ENSPREG00000014739	slc38a4 (ENSPREG00000014746)	slc38a2 (ENSPREG00000014787)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014855)	ENSPREG00000014901	arid2 (ENSPREG00000014960)	gas2l3 (ENSPREG00000015012)
Guppy	MODERN SPECIES	454	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303	apex1 (ENSPREG00000014298)	osgep (ENSPREG00000014273)	si:ch211-214j24.10 (ENSPREG00000014266)	ENSPREG00000014264	nav3 (ENSPREG00000014206)	ENSPREG00000014030	e2f7 (ENSPREG00000014011)
NAME_6	ANCESTRAL SPECIES	84																ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.c ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00940000158600	ENSGT00950000183146.a.a	ENSGT00940000158917	ENSGT00940000155486.l.b.a.a.a	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a.b	ENSGT00940000155486.l.a.a	ENSGT00950000183205.b.a.b.a.b	ENSGT00390000016138	ENSGT00940000159389
Amazon molly	MODERN SPECIES	769																NXPE3 (ENSPFOG00000009168) ##22	NXPE3 (ENSPFOG00000009303) ##22	NXPE3 (ENSPFOG00000023695) ##22	NXPE3 (ENSPFOG00000009353) ##22	ENSPFOG00000022830 ##22	NXPE3 (ENSPFOG00000009412) ##22	ANO4 (ENSPFOG00000009519)	ENSPFOG00000023151	ENSPFOG00000010078	slc38a4 (ENSPFOG00000010120)	slc38a2 (ENSPFOG00000010414)	slc38a2 (ENSPFOG00000022861)
Sailfin molly	MODERN SPECIES	3115																NXPE3 (ENSPLAG00000020390) ##22	NXPE3 (ENSPLAG00000020380) ##22	ENSPLAG00000020358 ##22
Platyfish	MODERN SPECIES	8	ENSXMAG00000006242	nav3 (ENSXMAG00000006213)	ENSXMAG00000022026	si:ch211-214j24.10 (ENSXMAG00000006212)	osgep (ENSXMAG00000006199)	apex1 (ENSXMAG00000006195)	ENSXMAG00000025951	SELENOO (ENSXMAG00000006183)	ENSXMAG00000024112	ENSXMAG00000024972	ENSXMAG00000006179	ENSXMAG00000027183 ##22	NXPE3 (ENSXMAG00000027145) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000008531) ##22	ENSXMAG00000021808 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000006167 ##22	ANO4 (ENSXMAG00000006134)	ENSXMAG00000028370	slc38a4 (ENSXMAG00000006133)	slc38a2 (ENSXMAG00000028934)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000024283)	ENSXMAG00000024232	slc38a2 (ENSXMAG00000020966)	slc38a2 (ENSXMAG00000026557)
NAME_4	DUPLICATION
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a.c ##22
Sheepshead minnow	MODERN SPECIES	212	ENSCVAG00000006418	naa35 (ENSCVAG00000006514)	GOLM1 (ENSCVAG00000006527)	lmbrd2a (ENSCVAG00000006544)	slc1a3a (ENSCVAG00000006592)	nipbla (ENSCVAG00000006776)	ndc80 (ENSCVAG00000006787)	ENSCVAG00000006792	EGFLAM (ENSCVAG00000006880)	si:dkey-251i10.2 (ENSCVAG00000006892)	opn4xb (ENSCVAG00000006900)	pdlim5a (ENSCVAG00000006974)	bmpr1ba (ENSCVAG00000007025)	UNC5C (ENSCVAG00000007070)	NXPE3 (ENSCVAG00000007081) ##22	NXPE3 (ENSCVAG00000007090) ##22
NAME_4	ANCESTRAL SPECIES	714																ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22
Mummichog	MODERN SPECIES	1363																NXPE3 (ENSFHEG00000022922) ##22
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	212	agtpbp1 (ENSCVAG00000006415)	ENSCVAG00000006418	naa35 (ENSCVAG00000006514)	GOLM1 (ENSCVAG00000006527)	lmbrd2a (ENSCVAG00000006544)	slc1a3a (ENSCVAG00000006592)	nipbla (ENSCVAG00000006776)	ndc80 (ENSCVAG00000006787)	ENSCVAG00000006792	EGFLAM (ENSCVAG00000006880)	si:dkey-251i10.2 (ENSCVAG00000006892)	opn4xb (ENSCVAG00000006900)	pdlim5a (ENSCVAG00000006974)	bmpr1ba (ENSCVAG00000007025)	UNC5C (ENSCVAG00000007070)	NXPE3 (ENSCVAG00000007081) ##22	NXPE3 (ENSCVAG00000007090) ##22
Sheepshead minnow	MODERN SPECIES	982															sri (ENSCVAG00000014572)	NXPE3 (ENSCVAG00000014583) ##22	NXPE3 (ENSCVAG00000000373) ##22	ENSCVAG00000014633	ENSCVAG00000014743	ENSCVAG00000014768	supt3h (ENSCVAG00000014780)	cdc5l (ENSCVAG00000014810)	ENSCVAG00000014850
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22
Poeciliinae	ANCESTRAL SPECIES	88													ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22
Poecilia	ANCESTRAL SPECIES	47	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22
NAME_6	ANCESTRAL SPECIES	84	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.a	ENSGT00940000155486.l.b.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a.a.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.c ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22
Amazon molly	MODERN SPECIES	769								slc38a2 (ENSPFOG00000022861)	slc38a2 (ENSPFOG00000010414)	slc38a4 (ENSPFOG00000010120)	ENSPFOG00000010078	ENSPFOG00000023151	ANO4 (ENSPFOG00000009519)	NXPE3 (ENSPFOG00000009412) ##22	ENSPFOG00000022830 ##22	NXPE3 (ENSPFOG00000009353) ##22	NXPE3 (ENSPFOG00000023695) ##22	NXPE3 (ENSPFOG00000009303) ##22	NXPE3 (ENSPFOG00000009168) ##22
Sailfin molly	MODERN SPECIES	917																NXPE3 (ENSPLAG00000012279) ##22	NXPE3 (ENSPLAG00000012221) ##22	NXPE3 (ENSPLAG00000012195) ##22	ANO4 (ENSPLAG00000012173)	ENSPLAG00000012094	slc38a4 (ENSPLAG00000012083)	slc38a2 (ENSPLAG00000012070)
Guppy	MODERN SPECIES	454	stk38l (ENSPREG00000015077)	med21 (ENSPREG00000015064)	fgfr1op2 (ENSPREG00000015055)	TM7SF3 (ENSPREG00000015032)	gas2l3 (ENSPREG00000015012)	arid2 (ENSPREG00000014960)	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303
Platyfish	MODERN SPECIES	8	ENSXMAG00000021822	ENSXMAG00000027633	slc38a2 (ENSXMAG00000026557)	slc38a2 (ENSXMAG00000020966)	ENSXMAG00000024232	slc38a2 (ENSXMAG00000024283)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000028934)	slc38a4 (ENSXMAG00000006133)	ENSXMAG00000028370	ANO4 (ENSXMAG00000006134)	ENSXMAG00000006167 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000021808 ##22	NXPE3 (ENSXMAG00000008531) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000027145) ##22	ENSXMAG00000027183 ##22	ENSXMAG00000006179	ENSXMAG00000024972	ENSXMAG00000024112	SELENOO (ENSXMAG00000006183)	ENSXMAG00000025951	apex1 (ENSXMAG00000006195)	osgep (ENSXMAG00000006199)	si:ch211-214j24.10 (ENSXMAG00000006212)	ENSXMAG00000022026
Cyprinodontoidei	ANCESTRAL SPECIES	59	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22
Poeciliinae	ANCESTRAL SPECIES	19	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.f ##22	ENSGT00940000164836.l.a	ENSGT00940000164836.l.b	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.ab	ENSGT00940000157713	ENSGT00940000154980
Poecilia	ANCESTRAL SPECIES	47	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.b.a ##22
NAME_6	ANCESTRAL SPECIES	84	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.a	ENSGT00940000155486.l.b.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a.a.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.c ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.a.a.d ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.a.a.a ##22	ENSGT00950000182866.D.d.a.c.b.a.a.e.a.b.b.a ##22
Sailfin molly	MODERN SPECIES	917												slc38a2 (ENSPLAG00000012070)	slc38a4 (ENSPLAG00000012083)	ENSPLAG00000012094	ANO4 (ENSPLAG00000012173)	NXPE3 (ENSPLAG00000012195) ##22	NXPE3 (ENSPLAG00000012221) ##22	NXPE3 (ENSPLAG00000012279) ##22
Amazon molly	MODERN SPECIES	769										slc38a2 (ENSPFOG00000022861)	slc38a2 (ENSPFOG00000010414)	slc38a4 (ENSPFOG00000010120)	ENSPFOG00000010078	ENSPFOG00000023151	ANO4 (ENSPFOG00000009519)	NXPE3 (ENSPFOG00000009412) ##22	ENSPFOG00000022830 ##22	NXPE3 (ENSPFOG00000009353) ##22	NXPE3 (ENSPFOG00000023695) ##22	NXPE3 (ENSPFOG00000009303) ##22	NXPE3 (ENSPFOG00000009168) ##22
Guppy	MODERN SPECIES	454	zgc:162331 (ENSPREG00000015122)	BMAL2 (ENSPREG00000015103)	stk38l (ENSPREG00000015077)	med21 (ENSPREG00000015064)	fgfr1op2 (ENSPREG00000015055)	TM7SF3 (ENSPREG00000015032)	gas2l3 (ENSPREG00000015012)	arid2 (ENSPREG00000014960)	ENSPREG00000014901	slc38a2 (ENSPREG00000014855)	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)
Platyfish	MODERN SPECIES	8	gas2l3 (ENSXMAG00000008963)	arid2 (ENSXMAG00000006636)	ENSXMAG00000021822	ENSXMAG00000027633	slc38a2 (ENSXMAG00000026557)	slc38a2 (ENSXMAG00000020966)	ENSXMAG00000024232	slc38a2 (ENSXMAG00000024283)	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000028934)	slc38a4 (ENSXMAG00000006133)	ENSXMAG00000028370	ANO4 (ENSXMAG00000006134)	ENSXMAG00000006167 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000021808 ##22	NXPE3 (ENSXMAG00000008531) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000027145) ##22	ENSXMAG00000027183 ##22	ENSXMAG00000006179	ENSXMAG00000024972	ENSXMAG00000024112	SELENOO (ENSXMAG00000006183)	ENSXMAG00000025951	apex1 (ENSXMAG00000006195)	osgep (ENSXMAG00000006199)
NAME_4	ANCESTRAL SPECIES	224	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22
Sheepshead minnow	MODERN SPECIES	1092											slc38a2 (ENSCVAG00000016109)	slc38a2 (ENSCVAG00000015856)	slc38a4 (ENSCVAG00000015850)	AMIGO2 (ENSCVAG00000015822)	ANO4 (ENSCVAG00000000976)	NXPE3 (ENSCVAG00000015758) ##22	NXPE3 (ENSCVAG00000015747) ##22
Mummichog	MODERN SPECIES	645															ANO4 (ENSFHEG00000017180)	NXPE3 (ENSFHEG00000017097) ##22
Cyprinodontoidei	ANCESTRAL SPECIES	20																ENSGT00950000182866.D.d.a.c.b.a.a.f ##22	ENSGT00940000164836.l.a	ENSGT00940000164836.l.b	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.ab	ENSGT00940000157713	ENSGT00940000154980
NAME_4	ANCESTRAL SPECIES	95																ENSGT00950000182866.D.d.a.c.b.a.a.f ##22	ENSGT00940000164836.l.a.c	ENSGT00940000164836.l.a.d	ENSGT00940000164836.l.b	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Mummichog	MODERN SPECIES	1631																NXPE3 (ENSFHEG00000020161) ##22
Sheepshead minnow	MODERN SPECIES	854																NXPE3 (ENSCVAG00000022213) ##22	ENSCVAG00000022189	ENSCVAG00000022183	ENSCVAG00000022166	ENSCVAG00000022145	ENSCVAG00000000694	ENSCVAG00000022106	ENSCVAG00000022090	apex1 (ENSCVAG00000022075)	osgep (ENSCVAG00000022061)	si:ch211-214j24.10 (ENSCVAG00000022007)	ENSCVAG00000021999	ENSCVAG00000021953	nav3 (ENSCVAG00000021937)
Poeciliinae	ANCESTRAL SPECIES	19	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486.l.a.b	ENSGT00940000155486.l.b.b	ENSGT00940000155486.l.b.a	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.e.b ##22	ENSGT00950000182866.D.d.a.c.b.a.a.f ##22	ENSGT00940000164836.l.a	ENSGT00940000164836.l.b	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.ab	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Poecilia	ANCESTRAL SPECIES	28																ENSGT00950000182866.D.d.a.c.b.a.a.f ##22	ENSGT00940000164836.l.a	ENSGT00940000164836.l.b	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.ab	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
NAME_6	ANCESTRAL SPECIES	209																ENSGT00950000182866.D.d.a.c.b.a.a.f ##22	ENSGT00940000164836.l.a	ENSGT00940000164836.l.b	ENSGT00940000164836.k	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b.ab	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Amazon molly	MODERN SPECIES	527													ENSPFOG00000020200	ENSPFOG00000004578 ##22	ENSPFOG00000004563	NXPE3 (ENSPFOG00000004452) ##22	ENSPFOG00000004427	ENSPFOG00000004420	ENSPFOG00000004353	ENSPFOG00000004244	ENSPFOG00000004206	apex1 (ENSPFOG00000004178)	osgep (ENSPFOG00000004083)	si:ch211-214j24.10 (ENSPFOG00000004046)	nav3 (ENSPFOG00000003407)	ENSPFOG00000003340	e2f7 (ENSPFOG00000003272)	csrp2 (ENSPFOG00000003225)	zdhhc17 (ENSPFOG00000003032)	OSBPL8 (ENSPFOG00000002829)	ENSPFOG00000020199
Sailfin molly	MODERN SPECIES	1922																NXPE3 (ENSPLAG00000012626) ##22	ENSPLAG00000012642	ENSPLAG00000012655	ENSPLAG00000012666	ENSPLAG00000012674	ENSPLAG00000012699	SELENOO (ENSPLAG00000012729)	ENSPLAG00000012768	apex1 (ENSPLAG00000012779)	osgep (ENSPLAG00000012836)	si:ch211-214j24.10 (ENSPLAG00000012844)	ENSPLAG00000012850	ENSPLAG00000000293
Guppy	MODERN SPECIES	454	slc38a2 (ENSPREG00000014808)	slc38a2 (ENSPREG00000014787)	slc38a4 (ENSPREG00000014746)	ENSPREG00000014739	ANO4 (ENSPREG00000014703)	ENSPREG00000014687 ##22	NXPE3 (ENSPREG00000014669) ##22	ENSPREG00000014641 ##22	NXPE3 (ENSPREG00000014596) ##22	NXPE3 (ENSPREG00000014579) ##22	NXPE3 (ENSPREG00000014559) ##22	NXPE3 (ENSPREG00000014534) ##22	ENSPREG00000014522 ##22	NXPE3 (ENSPREG00000014514) ##22	ENSPREG00000014509 ##22	NXPE3 (ENSPREG00000014498) ##22	ENSPREG00000014487	ENSPREG00000014471	ENSPREG00000014456	ENSPREG00000014429	zgc:173709 (ENSPREG00000014399)	SELENOO (ENSPREG00000014359)	ENSPREG00000014303	apex1 (ENSPREG00000014298)	osgep (ENSPREG00000014273)	si:ch211-214j24.10 (ENSPREG00000014266)	ENSPREG00000014264	nav3 (ENSPREG00000014206)	ENSPREG00000014030	e2f7 (ENSPREG00000014011)	csrp2 (ENSPREG00000013990)
Platyfish	MODERN SPECIES	8	slc38a2 (ENSXMAG00000024689)	slc38a2 (ENSXMAG00000027686)	slc38a2 (ENSXMAG00000000485)	slc38a2 (ENSXMAG00000028934)	slc38a4 (ENSXMAG00000006133)	ENSXMAG00000028370	ANO4 (ENSXMAG00000006134)	ENSXMAG00000006167 ##22	ENSXMAG00000029149 ##22	ENSXMAG00000021808 ##22	NXPE3 (ENSXMAG00000008531) ##22	NXPE3 (ENSXMAG00000008533) ##22	NXPE3 (ENSXMAG00000022068) ##22	NXPE3 (ENSXMAG00000028858) ##22	NXPE3 (ENSXMAG00000027145) ##22	ENSXMAG00000027183 ##22	ENSXMAG00000006179	ENSXMAG00000024972	ENSXMAG00000024112	SELENOO (ENSXMAG00000006183)	ENSXMAG00000025951	apex1 (ENSXMAG00000006195)	osgep (ENSXMAG00000006199)	si:ch211-214j24.10 (ENSXMAG00000006212)	ENSXMAG00000022026	nav3 (ENSXMAG00000006213)	ENSXMAG00000006242	e2f7 (ENSXMAG00000006252)	csrp2 (ENSXMAG00000006257)	zdhhc17 (ENSXMAG00000006274)	OSBPL8 (ENSXMAG00000006300)
Aplocheiloidei	ANCESTRAL SPECIES	14	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836.l	ENSGT00940000164836.k
Mangrove rivulus	MODERN SPECIES	1265																NXPE3 (ENSKMAG00000009420) ##22	ENSKMAG00000009398
Turquoise killifish	MODERN SPECIES	1610	coa6 (ENSNFUG00015022449)	SLC13A4 (ENSNFUG00015022456)	Nfu_g_1_011670 (ENSNFUG00015022467)	BMAL2 (ENSNFUG00015022471)	stk38l (ENSNFUG00015022481)	FGFR1OP2 (ENSNFUG00015000049)	TM7SF3 (ENSNFUG00015000050)	GAS2L3 (ENSNFUG00015000052)	ARID2 (ENSNFUG00015000054)	ENSNFUG00015000058	ENSNFUG00015000063	slc38a2 (ENSNFUG00015000127)	slc38a4 (ENSNFUG00015000352)	AMIGO2 (ENSNFUG00015000544)	ANO4 (ENSNFUG00015000600)	NXPE3 (ENSNFUG00015000758) ##22	ENSNFUG00015000763	ENSNFUG00015000786	SLC26A5 (ENSNFUG00015000843)	psmc2 (ENSNFUG00015001194)	dnajc2 (ENSNFUG00015001233)	pmpcb (ENSNFUG00015001346)	PHAX (ENSNFUG00015001657)	ENSNFUG00015001660	kcnc2 (ENSNFUG00015001662)	phlda1 (ENSNFUG00015001668)	NAP1L1 (ENSNFUG00015001702)	ENSNFUG00015001815	ENSNFUG00015001817	CABZ01007893.1 (ENSNFUG00015001840)	ZDHHC17 (ENSNFUG00015001980)
Oryzias	ANCESTRAL SPECIES	20	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138.w	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00390000011401	ENSGT00940000156154	ENSGT00940000158497	ENSGT00940000154471.a.b.a.b.u.b	ENSGT00940000155197	ENSGT00940000154098.a.f	ENSGT00390000008708	ENSGT00940000153525.i.a	ENSGT00670000099475
Oryzias_a	ANCESTRAL SPECIES	53	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138.w	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00390000011401	ENSGT00940000156154	ENSGT00940000158497	ENSGT00940000154471.a.b.a.b.u.b	ENSGT00940000155197	ENSGT00940000154098.a.f	ENSGT00390000008708	ENSGT00940000153525.i.a	ENSGT00670000099475
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	MODERN SPECIES	15	slc13a4 (ENSORLG00000025248)	zgc:162331 (ENSORLG00000029239)	BMAL2 (ENSORLG00000009536)	stk38l (ENSORLG00000009571)	med21 (ENSORLG00000009581)	fgfr1op2 (ENSORLG00000009602)	TM7SF3 (ENSORLG00000009613)	gas2l3 (ENSORLG00000009624)	arid2 (ENSORLG00000009649)	ENSORLG00000028222	slc38a2 (ENSORLG00000009787)	slc38a4 (ENSORLG00000028149)	ANO4 (ENSORLG00000022167)	ENSORLG00000009808 ##22	ENSORLG00000027436	ENSORLG00000009799 ##22	ENSORLG00000028212 ##22	mrps33 (ENSORLG00000023919)	braf (ENSORLG00000009843)	large1 (ENSORLG00000009895)	ENSORLG00000009922	strap (ENSORLG00000009956)	ENSORLG00000009972	slc25a3b (ENSORLG00000009980)	ENSORLG00000009988	kiss2 (ENSORLG00000022821)	cntn1b (ENSORLG00000010060)	nrcama (ENSORLG00000010153)	ENSORLG00000010173	ENSORLG00000026391	ENSORLG00000010181
Japanese Medaka HdrR	MODERN SPECIES	15	ENSORLG00000010173	nrcama (ENSORLG00000010153)	cntn1b (ENSORLG00000010060)	kiss2 (ENSORLG00000022821)	ENSORLG00000009988	slc25a3b (ENSORLG00000009980)	ENSORLG00000009972	strap (ENSORLG00000009956)	ENSORLG00000009922	large1 (ENSORLG00000009895)	braf (ENSORLG00000009843)	mrps33 (ENSORLG00000023919)	ENSORLG00000028212 ##22	ENSORLG00000009799 ##22	ENSORLG00000027436	ENSORLG00000009808 ##22	ANO4 (ENSORLG00000022167)	slc38a4 (ENSORLG00000028149)	slc38a2 (ENSORLG00000009787)	ENSORLG00000028222	arid2 (ENSORLG00000009649)	gas2l3 (ENSORLG00000009624)	TM7SF3 (ENSORLG00000009613)	fgfr1op2 (ENSORLG00000009602)	med21 (ENSORLG00000009581)	stk38l (ENSORLG00000009571)	BMAL2 (ENSORLG00000009536)	zgc:162331 (ENSORLG00000029239)	slc13a4 (ENSORLG00000025248)	coa6 (ENSORLG00000026792)	ENSORLG00000009516
Japanese Medaka HdrR	MODERN SPECIES	15	zgc:162331 (ENSORLG00000029239)	BMAL2 (ENSORLG00000009536)	stk38l (ENSORLG00000009571)	med21 (ENSORLG00000009581)	fgfr1op2 (ENSORLG00000009602)	TM7SF3 (ENSORLG00000009613)	gas2l3 (ENSORLG00000009624)	arid2 (ENSORLG00000009649)	ENSORLG00000028222	slc38a2 (ENSORLG00000009787)	slc38a4 (ENSORLG00000028149)	ANO4 (ENSORLG00000022167)	ENSORLG00000009808 ##22	ENSORLG00000027436	ENSORLG00000009799 ##22	ENSORLG00000028212 ##22	mrps33 (ENSORLG00000023919)	braf (ENSORLG00000009843)	large1 (ENSORLG00000009895)	ENSORLG00000009922	strap (ENSORLG00000009956)	ENSORLG00000009972	slc25a3b (ENSORLG00000009980)	ENSORLG00000009988	kiss2 (ENSORLG00000022821)	cntn1b (ENSORLG00000010060)	nrcama (ENSORLG00000010153)	ENSORLG00000010173	ENSORLG00000026391	ENSORLG00000010181	dnajb9b (ENSORLG00000010187)
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	226																NXPE3 (ENSOSIG00000023407) ##22	large1 (ENSOSIG00000023330)	ENSOSIG00000023294	strap (ENSOSIG00000023289)	ENSOSIG00000023275	slc25a3b (ENSOSIG00000023259)	ENSOSIG00000023252	ENSOSIG00000023251
Chinese medaka	MODERN SPECIES	5110																ENSOSIG00000014025 ##22
Oryzias_b	ANCESTRAL SPECIES	99			ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138.w	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00390000011401	ENSGT00940000156154
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	17	wnt3 (ENSOMEG00000004139)	ormdl3 (ENSOMEG00000004147)	ENSOMEG00000004168	DHX8 (ENSOMEG00000004222)	etv4 (ENSOMEG00000004264)	meox1 (ENSOMEG00000004270)	ENSOMEG00000004286	SOST (ENSOMEG00000004291)	ENSOMEG00000004296	arl4d (ENSOMEG00000004308)	tmem106a (ENSOMEG00000004329)	nbr1a (ENSOMEG00000004347)	psme3 (ENSOMEG00000004369)	ENSOMEG00000000102	ANO4 (ENSOMEG00000004491)	NXPE3 (ENSOMEG00000004530) ##22	NXPE3 (ENSOMEG00000004546) ##22	mrps33 (ENSOMEG00000004554)	ENSOMEG00000004562	braf (ENSOMEG00000004636)	ANK3 (ENSOMEG00000004945)	acsl5 (ENSOMEG00000005074)	ENSOMEG00000005114	tectb (ENSOMEG00000005126)	ENSOMEG00000005148	plxdc1 (ENSOMEG00000005188)	LASP1 (ENSOMEG00000005216)	ENSOMEG00000005246	plekhm1 (ENSOMEG00000005265)	ENSOMEG00000005279	ENSOMEG00000005292
Indian medaka	MODERN SPECIES	17	ENSOMEG00000005305	ENSOMEG00000005292	ENSOMEG00000005279	plekhm1 (ENSOMEG00000005265)	ENSOMEG00000005246	LASP1 (ENSOMEG00000005216)	plxdc1 (ENSOMEG00000005188)	ENSOMEG00000005148	tectb (ENSOMEG00000005126)	ENSOMEG00000005114	acsl5 (ENSOMEG00000005074)	ANK3 (ENSOMEG00000004945)	braf (ENSOMEG00000004636)	ENSOMEG00000004562	mrps33 (ENSOMEG00000004554)	NXPE3 (ENSOMEG00000004546) ##22	NXPE3 (ENSOMEG00000004530) ##22	ANO4 (ENSOMEG00000004491)	ENSOMEG00000000102	psme3 (ENSOMEG00000004369)	nbr1a (ENSOMEG00000004347)	tmem106a (ENSOMEG00000004329)	arl4d (ENSOMEG00000004308)	ENSOMEG00000004296	SOST (ENSOMEG00000004291)	ENSOMEG00000004286	meox1 (ENSOMEG00000004270)	etv4 (ENSOMEG00000004264)	DHX8 (ENSOMEG00000004222)	ENSOMEG00000004168	ormdl3 (ENSOMEG00000004147)
Javanese ricefish	DUPLICATION
Javanese ricefish	MODERN SPECIES	15	rbm17 (ENSOJAG00000021422)	pfkfb3 (ENSOJAG00000020626)	ntf3 (ENSOJAG00000020584)	BMAL2 (ENSOJAG00000020544)	stk38l (ENSOJAG00000020521)	med21 (ENSOJAG00000020502)	fgfr1op2 (ENSOJAG00000020488)	TM7SF3 (ENSOJAG00000020446)	gas2l3 (ENSOJAG00000020349)	arid2 (ENSOJAG00000020285)	ENSOJAG00000020219	slc38a4 (ENSOJAG00000019017)	ENSOJAG00000018905	ANO4 (ENSOJAG00000018236)	NXPE3 (ENSOJAG00000018163) ##22	NXPE3 (ENSOJAG00000018142) ##22	mrps33 (ENSOJAG00000018112)	braf (ENSOJAG00000017950)	ENSOJAG00000017939	ENSOJAG00000017931	ssuh2rs1 (ENSOJAG00000017866)	ssuh2rs1 (ENSOJAG00000017839)	msrb3 (ENSOJAG00000017818)	ENSOJAG00000017807	ENSOJAG00000017790	dera (ENSOJAG00000017685)	lmo3 (ENSOJAG00000017627)	arhgef39 (ENSOJAG00000017604)	ENSOJAG00000017495	TMEM121B (ENSOJAG00000017482)	mkrn1 (ENSOJAG00000017428)
Javanese ricefish	MODERN SPECIES	15	ENSOJAG00000021432	rbm17 (ENSOJAG00000021422)	pfkfb3 (ENSOJAG00000020626)	ntf3 (ENSOJAG00000020584)	BMAL2 (ENSOJAG00000020544)	stk38l (ENSOJAG00000020521)	med21 (ENSOJAG00000020502)	fgfr1op2 (ENSOJAG00000020488)	TM7SF3 (ENSOJAG00000020446)	gas2l3 (ENSOJAG00000020349)	arid2 (ENSOJAG00000020285)	ENSOJAG00000020219	slc38a4 (ENSOJAG00000019017)	ENSOJAG00000018905	ANO4 (ENSOJAG00000018236)	NXPE3 (ENSOJAG00000018163) ##22	NXPE3 (ENSOJAG00000018142) ##22	mrps33 (ENSOJAG00000018112)	braf (ENSOJAG00000017950)	ENSOJAG00000017939	ENSOJAG00000017931	ssuh2rs1 (ENSOJAG00000017866)	ssuh2rs1 (ENSOJAG00000017839)	msrb3 (ENSOJAG00000017818)	ENSOJAG00000017807	ENSOJAG00000017790	dera (ENSOJAG00000017685)	lmo3 (ENSOJAG00000017627)	arhgef39 (ENSOJAG00000017604)	ENSOJAG00000017495	TMEM121B (ENSOJAG00000017482)
Percomorphaceae_C	ANCESTRAL SPECIES	22	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263533.b.b.b.a.a.a.b.a	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000171263
Percomorphaceae_D	ANCESTRAL SPECIES	22	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980
Anabantaria	ANCESTRAL SPECIES	21	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a
Anabantoidei	ANCESTRAL SPECIES	26	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT00390000005508.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a	ENSGT00440000039564.b
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	20	slc13a4 (ENSBSLG00000016752)	zgc:162331 (ENSBSLG00000016579)	BMAL2 (ENSBSLG00000015567)	stk38l (ENSBSLG00000015530)	med21 (ENSBSLG00000015513)	fgfr1op2 (ENSBSLG00000015501)	TM7SF3 (ENSBSLG00000015299)	gas2l3 (ENSBSLG00000015240)	arid2 (ENSBSLG00000014732)	ENSBSLG00000014681	ENSBSLG00000014649	slc38a2 (ENSBSLG00000012707)	slc38a4 (ENSBSLG00000012424)	AMIGO2 (ENSBSLG00000012407)	ANO4 (ENSBSLG00000011771)	NXPE3 (ENSBSLG00000011349) ##22	ENSBSLG00000011346	NXPE3 (ENSBSLG00000011330) ##22	ENSBSLG00000011318	ENSBSLG00000011314	ENSBSLG00000011305	osgep (ENSBSLG00000011272)	si:ch211-214j24.10 (ENSBSLG00000011265)	apex1 (ENSBSLG00000011259)	ENSBSLG00000011126	nav3 (ENSBSLG00000010085)	ENSBSLG00000010009	e2f7 (ENSBSLG00000009981)	csrp2 (ENSBSLG00000009949)	zdhhc17 (ENSBSLG00000009631)	OSBPL8 (ENSBSLG00000009400)
Siamese fighting fish	MODERN SPECIES	20	BMAL2 (ENSBSLG00000015567)	stk38l (ENSBSLG00000015530)	med21 (ENSBSLG00000015513)	fgfr1op2 (ENSBSLG00000015501)	TM7SF3 (ENSBSLG00000015299)	gas2l3 (ENSBSLG00000015240)	arid2 (ENSBSLG00000014732)	ENSBSLG00000014681	ENSBSLG00000014649	slc38a2 (ENSBSLG00000012707)	slc38a4 (ENSBSLG00000012424)	AMIGO2 (ENSBSLG00000012407)	ANO4 (ENSBSLG00000011771)	NXPE3 (ENSBSLG00000011349) ##22	ENSBSLG00000011346	NXPE3 (ENSBSLG00000011330) ##22	ENSBSLG00000011318	ENSBSLG00000011314	ENSBSLG00000011305	osgep (ENSBSLG00000011272)	si:ch211-214j24.10 (ENSBSLG00000011265)	apex1 (ENSBSLG00000011259)	ENSBSLG00000011126	nav3 (ENSBSLG00000010085)	ENSBSLG00000010009	e2f7 (ENSBSLG00000009981)	csrp2 (ENSBSLG00000009949)	zdhhc17 (ENSBSLG00000009631)	OSBPL8 (ENSBSLG00000009400)	nap1l1 (ENSBSLG00000009045)	phlda1 (ENSBSLG00000008970)
Climbing perch	MODERN SPECIES	14	slc13a4 (ENSATEG00000003643)	zgc:162331 (ENSATEG00000029048)	BMAL2 (ENSATEG00000003606)	STK38L (ENSATEG00000003551)	MED21 (ENSATEG00000003529)	ENSATEG00000003500	TM7SF3 (ENSATEG00000003403)	ENSATEG00000027440	ENSATEG00000003354	ENSATEG00000025384	ENSATEG00000003341	SLC38A2 (ENSATEG00000003326)	ENSATEG00000027439	ENSATEG00000027246	ENSATEG00000003129	ENSATEG00000003044 ##22	ENSATEG00000027900	ENSATEG00000002897	ENSATEG00000029410	apex1 (ENSATEG00000028063)	ENSATEG00000002767	si:ch211-214j24.10 (ENSATEG00000002825)	ENSATEG00000002661	ENSATEG00000026785	NAV3 (ENSATEG00000002447)	ENSATEG00000029522	ENSATEG00000002361	ENSATEG00000029789	e2f7 (ENSATEG00000002350)	csrp2 (ENSATEG00000002332)	zdhhc17 (ENSATEG00000002244)
Zig-zag eel	MODERN SPECIES	15	coa6 (ENSMAMG00000024671)	slc13a4 (ENSMAMG00000023580)	ENSMAMG00000023577	zgc:162331 (ENSMAMG00000023574)	BMAL2 (ENSMAMG00000023570)	STK38L (ENSMAMG00000023567)	MED21 (ENSMAMG00000027572)	ENSMAMG00000023565	TM7SF3 (ENSMAMG00000023564)	ENSMAMG00000023562	ENSMAMG00000023558	ENSMAMG00000023556	ENSMAMG00000023548	ENSMAMG00000025115	ENSMAMG00000023541	ENSMAMG00000023537 ##22	ENSMAMG00000023532	ENSMAMG00000023528	ENSMAMG00000024929	ENSMAMG00000028093	ENSMAMG00000023524	apex1 (ENSMAMG00000025566)	OSGEP (ENSMAMG00000023520)	si:ch211-214j24.10 (ENSMAMG00000023522)	ENSMAMG00000023517	ENSMAMG00000023513	NAV3 (ENSMAMG00000023499)	e2f7 (ENSMAMG00000023495)	csrp2 (ENSMAMG00000028219)	zdhhc17 (ENSMAMG00000023485)	OSBPL8 (ENSMAMG00000023475)
Carangaria	ANCESTRAL SPECIES	22	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Carangaria_A	ANCESTRAL SPECIES	33	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00940000178511	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Seriola	ANCESTRAL SPECIES	9	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836.q	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00940000171263	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Yellowtail amberjack	MODERN SPECIES	2717													slc38a4 (ENSSLDG00000023170)	ENSSLDG00000023147	ANO4 (ENSSLDG00000023109)	NXPE3 (ENSSLDG00000023094) ##22	ENSSLDG00000023086	ENSSLDG00000023063	ENSSLDG00000023054	selenoo2 (ENSSLDG00000023029)	ENSSLDG00000023014	apex1 (ENSSLDG00000023005)	osgep (ENSSLDG00000022979)	si:ch211-214j24.10 (ENSSLDG00000022965)
Greater amberjack	MODERN SPECIES	60	slc13a4 (ENSSDUG00000015590)	zgc:162331 (ENSSDUG00000015616)	ENSSDUG00000015633	BMAL2 (ENSSDUG00000015650)	stk38l (ENSSDUG00000015698)	med21 (ENSSDUG00000015731)	fgfr1op2 (ENSSDUG00000015749)	TM7SF3 (ENSSDUG00000015776)	gas2l3 (ENSSDUG00000015828)	arid2 (ENSSDUG00000015858)	ENSSDUG00000015890	slc38a2 (ENSSDUG00000015919)	slc38a4 (ENSSDUG00000015970)	ENSSDUG00000016008	ANO4 (ENSSDUG00000016036)	NXPE3 (ENSSDUG00000016189) ##22	ENSSDUG00000016229	ENSSDUG00000016250	ENSSDUG00000016267	ENSSDUG00000016291	selenoo2 (ENSSDUG00000016311)	ENSSDUG00000016330	apex1 (ENSSDUG00000016377)	osgep (ENSSDUG00000016387)	si:ch211-214j24.10 (ENSSDUG00000016433)	ENSSDUG00000016447	ENSSDUG00000016489	nav3 (ENSSDUG00000016499)	ENSSDUG00000016552	ENSSDUG00000016562	ENSSDUG00000016578
Barramundi perch	DUPLICATION
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	256	slc13a4 (ENSLCAG00010026263)	zgc:162331 (ENSLCAG00010026266)	BMAL2 (ENSLCAG00010026267)	stk38l (ENSLCAG00010026271)	med21 (ENSLCAG00010026284)	fgfr1op2 (ENSLCAG00010026289)	TM7SF3 (ENSLCAG00010026297)	gas2l3 (ENSLCAG00010026307)	arid2 (ENSLCAG00010026317)	ENSLCAG00010026333	slc38a2 (ENSLCAG00010026358)	slc38a4 (ENSLCAG00010026398)	AMIGO2 (ENSLCAG00010026426)	ANO4 (ENSLCAG00010026429)	NXPE3 (ENSLCAG00010026438) ##22	NXPE3 (ENSLCAG00010026444) ##22	ENSLCAG00010026447	ENSLCAG00010026448	ENSLCAG00010026449	SELENOO (ENSLCAG00010026451)	ENSLCAG00010026455	apex1 (ENSLCAG00010026457)	osgep (ENSLCAG00010026462)	si:ch211-214j24.10 (ENSLCAG00010026469)	ENSLCAG00010026472	ENSLCAG00010026473
Barramundi perch	MODERN SPECIES	256	coa6 (ENSLCAG00010026261)	slc13a4 (ENSLCAG00010026263)	zgc:162331 (ENSLCAG00010026266)	BMAL2 (ENSLCAG00010026267)	stk38l (ENSLCAG00010026271)	med21 (ENSLCAG00010026284)	fgfr1op2 (ENSLCAG00010026289)	TM7SF3 (ENSLCAG00010026297)	gas2l3 (ENSLCAG00010026307)	arid2 (ENSLCAG00010026317)	ENSLCAG00010026333	slc38a2 (ENSLCAG00010026358)	slc38a4 (ENSLCAG00010026398)	AMIGO2 (ENSLCAG00010026426)	ANO4 (ENSLCAG00010026429)	NXPE3 (ENSLCAG00010026438) ##22	NXPE3 (ENSLCAG00010026444) ##22	ENSLCAG00010026447	ENSLCAG00010026448	ENSLCAG00010026449	SELENOO (ENSLCAG00010026451)	ENSLCAG00010026455	apex1 (ENSLCAG00010026457)	osgep (ENSLCAG00010026462)	si:ch211-214j24.10 (ENSLCAG00010026469)	ENSLCAG00010026472	ENSLCAG00010026473
Barramundi perch	MODERN SPECIES	563														efnb2a (ENSLCAG00010012867)	arglu1a (ENSLCAG00010012864)	NXPE3 (ENSLCAG00010012855) ##22	ENSLCAG00010012846	ENSLCAG00010012845	ENSLCAG00010012835	ENSLCAG00010012824	ENSLCAG00010012819	ENSLCAG00010012817	ENSLCAG00010012813	ENSLCAG00010012811	ENSLCAG00010012806	ENSLCAG00010012805	ENSLCAG00010012800	ENSLCAG00010012798	ENSLCAG00010012794	ENSLCAG00010012786	ENSLCAG00010012782
Eupercaria	ANCESTRAL SPECIES	21	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980
Tetraodontidae	ANCESTRAL SPECIES	17	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00400000024636	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT00940000156207.b.c.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01060000248862	ENSGT00940000158014	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a	ENSGT00440000039564.b
Fugu	MODERN SPECIES	9	ENSTRUG00000003029	ENSTRUG00000027428	ENSTRUG00000023557	dyrk2 (ENSTRUG00000032406)	ENSTRUG00000006741	ENSTRUG00000025030	ENSTRUG00000006725	mdm1 (ENSTRUG00000030571)	ENSTRUG00000021835	cand1 (ENSTRUG00000005935)	grip1 (ENSTRUG00000005225)	lsm8 (ENSTRUG00000030890)	SHANK3 (ENSTRUG00000004729)	ENSTRUG00000006978	ENSTRUG00000023034	NXPE3 (ENSTRUG00000004429) ##22	ENSTRUG00000025991	ENSTRUG00000024768	apex1 (ENSTRUG00000004268)	osgep (ENSTRUG00000003877)	si:ch211-214j24.10 (ENSTRUG00000003852)	ENSTRUG00000027985	nav3 (ENSTRUG00000001974)	e2f7 (ENSTRUG00000001843)	csrp2 (ENSTRUG00000019675)	zdhhc17 (ENSTRUG00000001408)	ENSTRUG00000028097	OSBPL8 (ENSTRUG00000001140)	nap1l1 (ENSTRUG00000000910)	phlda1 (ENSTRUG00000028502)	ENSTRUG00000030645
Tetraodon	MODERN SPECIES	11	pfkfb3 (ENSTNIG00000006891)	ntf3 (ENSTNIG00000002402)	ano2b (ENSTNIG00000006890)	pik3cg (ENSTNIG00000006889)	ENSTNIG00000002023	ENSTNIG00000006888	ENSTNIG00000002854	stk38l (ENSTNIG00000002853)	gas2l3 (ENSTNIG00000005770)	arid2 (ENSTNIG00000005771)	ENSTNIG00000005772	slc38a2 (ENSTNIG00000001954)	slc38a4 (ENSTNIG00000005773)	ENSTNIG00000005774	ENSTNIG00000005775	NXPE3 (ENSTNIG00000005776) ##22	ENSTNIG00000006122	ENSTNIG00000005777	apex1 (ENSTNIG00000005778)	osgep (ENSTNIG00000005779)	nav3 (ENSTNIG00000005780)	klhl20 (ENSTNIG00000003916)	OSBPL8 (ENSTNIG00000006102)	nap1l1 (ENSTNIG00000005525)	ENSTNIG00000006016	cmah (ENSTNIG00000003792)
Eupecaria_A	ANCESTRAL SPECIES	21	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT01100000263533.b.b.b.a.b.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980
Eupecaria_B	ANCESTRAL SPECIES	21	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
Eupecaria_C	ANCESTRAL SPECIES	18	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00400000022326.b.b.b	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	34	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT00940000162179.e.b.a.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00400000022326.b.b.b	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000171263	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b
European seabass	MODERN SPECIES	23	ENSDLAG00005011828	ENSDLAG00005009759	coa6 (ENSDLAG00005028408)	slc13a4 (ENSDLAG00005009154)	zgc:162331 (ENSDLAG00005009126)	BMAL2 (ENSDLAG00005009059)	STK38L (ENSDLAG00005009035)	MED21 (ENSDLAG00005009023)	TM7SF3 (ENSDLAG00005008958)	ENSDLAG00005008948	arid2 (ENSDLAG00005008829)	ENSDLAG00005008813	ENSDLAG00005007489	ENSDLAG00005007438	ENSDLAG00005006817	ENSDLAG00005006804 ##22	ENSDLAG00005006797	ENSDLAG00005006793	ENSDLAG00005006712	ENSDLAG00005028131	ENSDLAG00005006666	si:ch211-214j24.10 (ENSDLAG00005006610)	osgep (ENSDLAG00005030608)	ENSDLAG00005006604	NAV3 (ENSDLAG00005006299)	ENSDLAG00005006229	csrp2 (ENSDLAG00005029271)	zdhhc17 (ENSDLAG00005006012)	OSBPL8 (ENSDLAG00005004616)	ENSDLAG00005028017	ENSDLAG00005004540
Gilthead seabream	DUPLICATION
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	5	COA6 (ENSSAUG00010013759)	slc13a4 (ENSSAUG00010013597)	zgc:162331 (ENSSAUG00010013595)	BMAL2 (ENSSAUG00010013586)	stk38l (ENSSAUG00010013202)	med21 (ENSSAUG00010013197)	fgfr1op2 (ENSSAUG00010013196)	TM7SF3 (ENSSAUG00010012970)	gas2l3 (ENSSAUG00010012954)	arid2 (ENSSAUG00010012924)	ENSSAUG00010012922	slc38a4 (ENSSAUG00010011653)	ENSSAUG00010011641	ANO4 (ENSSAUG00010011593)	NXPE3 (ENSSAUG00010011577) ##22	NXPE3 (ENSSAUG00010011572) ##22	NXPE3 (ENSSAUG00010011570) ##22	ENSSAUG00010011569	ENSSAUG00010011568	selenoo2 (ENSSAUG00010011550)	ENSSAUG00010011546	apex1 (ENSSAUG00010011545)	osgep (ENSSAUG00010011500)	si:ch211-214j24.10 (ENSSAUG00010011497)	ENSSAUG00010011494	ENSSAUG00010011493	nav3 (ENSSAUG00010011459)	ENSSAUG00010026014	e2f7 (ENSSAUG00010026013)	ENSSAUG00010026011	csrp2 (ENSSAUG00010026009)
Gilthead seabream	MODERN SPECIES	5	ENSSAUG00010013763	COA6 (ENSSAUG00010013759)	slc13a4 (ENSSAUG00010013597)	zgc:162331 (ENSSAUG00010013595)	BMAL2 (ENSSAUG00010013586)	stk38l (ENSSAUG00010013202)	med21 (ENSSAUG00010013197)	fgfr1op2 (ENSSAUG00010013196)	TM7SF3 (ENSSAUG00010012970)	gas2l3 (ENSSAUG00010012954)	arid2 (ENSSAUG00010012924)	ENSSAUG00010012922	slc38a4 (ENSSAUG00010011653)	ENSSAUG00010011641	ANO4 (ENSSAUG00010011593)	NXPE3 (ENSSAUG00010011577) ##22	NXPE3 (ENSSAUG00010011572) ##22	NXPE3 (ENSSAUG00010011570) ##22	ENSSAUG00010011569	ENSSAUG00010011568	selenoo2 (ENSSAUG00010011550)	ENSSAUG00010011546	apex1 (ENSSAUG00010011545)	osgep (ENSSAUG00010011500)	si:ch211-214j24.10 (ENSSAUG00010011497)	ENSSAUG00010011494	ENSSAUG00010011493	nav3 (ENSSAUG00010011459)	ENSSAUG00010026014	e2f7 (ENSSAUG00010026013)	ENSSAUG00010026011
Gilthead seabream	MODERN SPECIES	5	slc13a4 (ENSSAUG00010013597)	zgc:162331 (ENSSAUG00010013595)	BMAL2 (ENSSAUG00010013586)	stk38l (ENSSAUG00010013202)	med21 (ENSSAUG00010013197)	fgfr1op2 (ENSSAUG00010013196)	TM7SF3 (ENSSAUG00010012970)	gas2l3 (ENSSAUG00010012954)	arid2 (ENSSAUG00010012924)	ENSSAUG00010012922	slc38a4 (ENSSAUG00010011653)	ENSSAUG00010011641	ANO4 (ENSSAUG00010011593)	NXPE3 (ENSSAUG00010011577) ##22	NXPE3 (ENSSAUG00010011572) ##22	NXPE3 (ENSSAUG00010011570) ##22	ENSSAUG00010011569	ENSSAUG00010011568	selenoo2 (ENSSAUG00010011550)	ENSSAUG00010011546	apex1 (ENSSAUG00010011545)	osgep (ENSSAUG00010011500)	si:ch211-214j24.10 (ENSSAUG00010011497)	ENSSAUG00010011494	ENSSAUG00010011493	nav3 (ENSSAUG00010011459)	ENSSAUG00010026014	e2f7 (ENSSAUG00010026013)	ENSSAUG00010026011	csrp2 (ENSSAUG00010026009)	zdhhc17 (ENSSAUG00010025923)
Perciformes	ANCESTRAL SPECIES	66															ENSGT00400000024636	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b
Cottioidei	DUPLICATION
Cottioidei	ANCESTRAL SPECIES	19	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.v ##22	ENSGT00400000024636	ENSGT00950000182866.D.d.a.c.b.a.a.u ##22	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00940000165334
Lumpfish	DUPLICATION
Lumpfish	DUPLICATION
Lumpfish	DUPLICATION
Lumpfish	MODERN SPECIES	11	KIF5C (ENSCLMG00005011023)	ENSCLMG00005011024	ENSCLMG00005011025	ENSCLMG00005011027	zgc:112023 (ENSCLMG00005011034)	ENSCLMG00005011036	ENSCLMG00005011039	NXPE3 (ENSCLMG00005011040) ##22	ENSCLMG00005011041	NXPE3 (ENSCLMG00005011043) ##22	ENSCLMG00005011044	NXPE3 (ENSCLMG00005011046) ##22	ENSCLMG00005011047	NXPE3 (ENSCLMG00005011048) ##22	ENSCLMG00005011050	NXPE3 (ENSCLMG00005011053) ##22	ENSCLMG00005011054	pudp (ENSCLMG00005011056)	nlgn4xa (ENSCLMG00005011057)	PRKX (ENSCLMG00005011143)	MXRA5 (ENSCLMG00005011145)	ENSCLMG00005011153	ENSCLMG00005011318	ENSCLMG00005011322	ENSCLMG00005011326	ENSCLMG00005011332	ENSCLMG00005011334	ENSCLMG00005011335	ENSCLMG00005002826	ENSCLMG00005002877	ENSCLMG00005002895
Lumpfish	MODERN SPECIES	11	ENSCLMG00005010755	ACVR2A (ENSCLMG00005010757)	orc4 (ENSCLMG00005010871)	MBD5 (ENSCLMG00005011019)	KIF5C (ENSCLMG00005011023)	ENSCLMG00005011024	ENSCLMG00005011025	ENSCLMG00005011027	zgc:112023 (ENSCLMG00005011034)	ENSCLMG00005011036	ENSCLMG00005011039	NXPE3 (ENSCLMG00005011040) ##22	ENSCLMG00005011041	NXPE3 (ENSCLMG00005011043) ##22	ENSCLMG00005011044	NXPE3 (ENSCLMG00005011046) ##22	ENSCLMG00005011047	NXPE3 (ENSCLMG00005011048) ##22	ENSCLMG00005011050	NXPE3 (ENSCLMG00005011053) ##22	ENSCLMG00005011054	pudp (ENSCLMG00005011056)	nlgn4xa (ENSCLMG00005011057)	PRKX (ENSCLMG00005011143)	MXRA5 (ENSCLMG00005011145)	ENSCLMG00005011153	ENSCLMG00005011318	ENSCLMG00005011322	ENSCLMG00005011326	ENSCLMG00005011332	ENSCLMG00005011334
Lumpfish	DUPLICATION
Lumpfish	DUPLICATION
Lumpfish	MODERN SPECIES	11	ENSCLMG00005010702	zeb2b (ENSCLMG00005010704)	ENSCLMG00005010755	ACVR2A (ENSCLMG00005010757)	orc4 (ENSCLMG00005010871)	MBD5 (ENSCLMG00005011019)	KIF5C (ENSCLMG00005011023)	ENSCLMG00005011024	ENSCLMG00005011025	ENSCLMG00005011027	zgc:112023 (ENSCLMG00005011034)	ENSCLMG00005011036	ENSCLMG00005011039	NXPE3 (ENSCLMG00005011040) ##22	ENSCLMG00005011041	NXPE3 (ENSCLMG00005011043) ##22	ENSCLMG00005011044	NXPE3 (ENSCLMG00005011046) ##22	ENSCLMG00005011047	NXPE3 (ENSCLMG00005011048) ##22	ENSCLMG00005011050	NXPE3 (ENSCLMG00005011053) ##22	ENSCLMG00005011054	pudp (ENSCLMG00005011056)	nlgn4xa (ENSCLMG00005011057)	PRKX (ENSCLMG00005011143)	MXRA5 (ENSCLMG00005011145)	ENSCLMG00005011153	ENSCLMG00005011318	ENSCLMG00005011322	ENSCLMG00005011326
Lumpfish	MODERN SPECIES	11	orc4 (ENSCLMG00005010871)	MBD5 (ENSCLMG00005011019)	KIF5C (ENSCLMG00005011023)	ENSCLMG00005011024	ENSCLMG00005011025	ENSCLMG00005011027	zgc:112023 (ENSCLMG00005011034)	ENSCLMG00005011036	ENSCLMG00005011039	NXPE3 (ENSCLMG00005011040) ##22	ENSCLMG00005011041	NXPE3 (ENSCLMG00005011043) ##22	ENSCLMG00005011044	NXPE3 (ENSCLMG00005011046) ##22	ENSCLMG00005011047	NXPE3 (ENSCLMG00005011048) ##22	ENSCLMG00005011050	NXPE3 (ENSCLMG00005011053) ##22	ENSCLMG00005011054	pudp (ENSCLMG00005011056)	nlgn4xa (ENSCLMG00005011057)	PRKX (ENSCLMG00005011143)	MXRA5 (ENSCLMG00005011145)	ENSCLMG00005011153	ENSCLMG00005011318	ENSCLMG00005011322	ENSCLMG00005011326	ENSCLMG00005011332	ENSCLMG00005011334	ENSCLMG00005011335	ENSCLMG00005002826
Lumpfish	MODERN SPECIES	11	bzw1a (ENSCLMG00005010696)	ENSCLMG00005010699	ENSCLMG00005010702	zeb2b (ENSCLMG00005010704)	ENSCLMG00005010755	ACVR2A (ENSCLMG00005010757)	orc4 (ENSCLMG00005010871)	MBD5 (ENSCLMG00005011019)	KIF5C (ENSCLMG00005011023)	ENSCLMG00005011024	ENSCLMG00005011025	ENSCLMG00005011027	zgc:112023 (ENSCLMG00005011034)	ENSCLMG00005011036	ENSCLMG00005011039	NXPE3 (ENSCLMG00005011040) ##22	ENSCLMG00005011041	NXPE3 (ENSCLMG00005011043) ##22	ENSCLMG00005011044	NXPE3 (ENSCLMG00005011046) ##22	ENSCLMG00005011047	NXPE3 (ENSCLMG00005011048) ##22	ENSCLMG00005011050	NXPE3 (ENSCLMG00005011053) ##22	ENSCLMG00005011054	pudp (ENSCLMG00005011056)	nlgn4xa (ENSCLMG00005011057)	PRKX (ENSCLMG00005011143)	MXRA5 (ENSCLMG00005011145)	ENSCLMG00005011153	ENSCLMG00005011318
Lumpfish	MODERN SPECIES	15	nudt5 (ENSCLMG00005019945)	fbxo18 (ENSCLMG00005019944)	ENSCLMG00005019943	rbm17 (ENSCLMG00005019941)	pfkfb3 (ENSCLMG00005015769)	ntf3 (ENSCLMG00005015691)	ano2b (ENSCLMG00005015689)	ENSCLMG00005015688	pik3cg (ENSCLMG00005014400)	HBP1 (ENSCLMG00005014380)	ENSCLMG00005014376	ENSCLMG00005014370	coa6 (ENSCLMG00005014369)	slc13a4 (ENSCLMG00005014366)	zgc:162331 (ENSCLMG00005014364)	NXPE3 (ENSCLMG00005014362) ##22	mcm10 (ENSCLMG00005014306)	NXPE3 (ENSCLMG00005014303) ##22	ANO4 (ENSCLMG00005014300)	ENSCLMG00005014298	slc38a4 (ENSCLMG00005012155)	slc38a2 (ENSCLMG00005012143)	ENSCLMG00005012141	arid2 (ENSCLMG00005010467)	gas2l3 (ENSCLMG00005010441)	TM7SF3 (ENSCLMG00005010433)	fgfr1op2 (ENSCLMG00005010431)	med21 (ENSCLMG00005010429)	stk38l (ENSCLMG00005010403)	BMAL2 (ENSCLMG00005010402)	ENSCLMG00005010401
Stickleback	DUPLICATION
Stickleback	DUPLICATION
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	3	hspa9 (ENSGACG00000019542)	rab33ba (ENSGACG00000019540)	zgc:113425 (ENSGACG00000019538)	setd7 (ENSGACG00000019534)	stk38l (ENSGACG00000019532)	med21 (ENSGACG00000019530)	fgfr1op2 (ENSGACG00000019527)	TM7SF3 (ENSGACG00000019525)	ENSGACG00000019524	arid2 (ENSGACG00000019522)	ENSGACG00000019521	slc38a2 (ENSGACG00000019520)	slc38a4 (ENSGACG00000019519)	ENSGACG00000019518	ENSGACG00000019517	NXPE3 (ENSGACG00000019515) ##22	NXPE3 (ENSGACG00000019512) ##22	ANO4 (ENSGACG00000019509)	NXPE3 (ENSGACG00000019508) ##22	NXPE3 (ENSGACG00000019506) ##22	ENSGACG00000019505	ENSGACG00000019504	apex1 (ENSGACG00000019497)	osgep (ENSGACG00000019496)	si:ch211-214j24.10 (ENSGACG00000019495)	ENSGACG00000019494	cmah (ENSGACG00000019490)	cmah (ENSGACG00000019485)	krr1 (ENSGACG00000019481)	ENSGACG00000019480	nav3 (ENSGACG00000019472)
Stickleback	MODERN SPECIES	460	rfc4 (ENSGACG00000002080)	ENSGACG00000002084	rpl36 (ENSGACG00000002088)	lmnb2 (ENSGACG00000002099)	commd2 (ENSGACG00000002117)	TRAPPC8 (ENSGACG00000002121)	ctns (ENSGACG00000002126)	ndufa11 (ENSGACG00000002132)	zgc:171480 (ENSGACG00000002136)	slc5a9 (ENSGACG00000002137)	ENSGACG00000002148	b4galt6 (ENSGACG00000002150)	ENSGACG00000002160	ENSGACG00000002165	ENSGACG00000002169 ##22	NXPE3 (ENSGACG00000002171) ##22
Stickleback	MODERN SPECIES	3	ENSGACG00000019470	nav3 (ENSGACG00000019472)	ENSGACG00000019480	krr1 (ENSGACG00000019481)	cmah (ENSGACG00000019485)	cmah (ENSGACG00000019490)	ENSGACG00000019494	si:ch211-214j24.10 (ENSGACG00000019495)	osgep (ENSGACG00000019496)	apex1 (ENSGACG00000019497)	ENSGACG00000019504	ENSGACG00000019505	NXPE3 (ENSGACG00000019506) ##22	NXPE3 (ENSGACG00000019508) ##22	ANO4 (ENSGACG00000019509)	NXPE3 (ENSGACG00000019512) ##22	NXPE3 (ENSGACG00000019515) ##22	ENSGACG00000019517	ENSGACG00000019518	slc38a4 (ENSGACG00000019519)	slc38a2 (ENSGACG00000019520)	ENSGACG00000019521	arid2 (ENSGACG00000019522)	ENSGACG00000019524	TM7SF3 (ENSGACG00000019525)	fgfr1op2 (ENSGACG00000019527)	med21 (ENSGACG00000019530)	stk38l (ENSGACG00000019532)	setd7 (ENSGACG00000019534)	zgc:113425 (ENSGACG00000019538)	rab33ba (ENSGACG00000019540)
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	3	csrp2 (ENSGACG00000019467)	e2f7 (ENSGACG00000019468)	ENSGACG00000019470	nav3 (ENSGACG00000019472)	ENSGACG00000019480	krr1 (ENSGACG00000019481)	cmah (ENSGACG00000019485)	cmah (ENSGACG00000019490)	ENSGACG00000019494	si:ch211-214j24.10 (ENSGACG00000019495)	osgep (ENSGACG00000019496)	apex1 (ENSGACG00000019497)	ENSGACG00000019504	ENSGACG00000019505	NXPE3 (ENSGACG00000019506) ##22	NXPE3 (ENSGACG00000019508) ##22	ANO4 (ENSGACG00000019509)	NXPE3 (ENSGACG00000019512) ##22	NXPE3 (ENSGACG00000019515) ##22	ENSGACG00000019517	ENSGACG00000019518	slc38a4 (ENSGACG00000019519)	slc38a2 (ENSGACG00000019520)	ENSGACG00000019521	arid2 (ENSGACG00000019522)	ENSGACG00000019524	TM7SF3 (ENSGACG00000019525)	fgfr1op2 (ENSGACG00000019527)	med21 (ENSGACG00000019530)	stk38l (ENSGACG00000019532)	setd7 (ENSGACG00000019534)
Stickleback	MODERN SPECIES	460	b3gnt5a (ENSGACG00000002077)	rfc4 (ENSGACG00000002080)	ENSGACG00000002084	rpl36 (ENSGACG00000002088)	lmnb2 (ENSGACG00000002099)	commd2 (ENSGACG00000002117)	TRAPPC8 (ENSGACG00000002121)	ctns (ENSGACG00000002126)	ndufa11 (ENSGACG00000002132)	zgc:171480 (ENSGACG00000002136)	slc5a9 (ENSGACG00000002137)	ENSGACG00000002148	b4galt6 (ENSGACG00000002150)	ENSGACG00000002160	ENSGACG00000002165	ENSGACG00000002169 ##22	NXPE3 (ENSGACG00000002171) ##22
Cottioidei	ANCESTRAL SPECIES	19	ENSGT00390000004094	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.v ##22	ENSGT00400000024636	ENSGT00950000182866.D.d.a.c.b.a.a.u ##22	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT00940000179382	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	3	stk38l (ENSGACG00000019532)	med21 (ENSGACG00000019530)	fgfr1op2 (ENSGACG00000019527)	TM7SF3 (ENSGACG00000019525)	ENSGACG00000019524	arid2 (ENSGACG00000019522)	ENSGACG00000019521	slc38a2 (ENSGACG00000019520)	slc38a4 (ENSGACG00000019519)	ENSGACG00000019518	ENSGACG00000019517	NXPE3 (ENSGACG00000019515) ##22	NXPE3 (ENSGACG00000019512) ##22	ANO4 (ENSGACG00000019509)	NXPE3 (ENSGACG00000019508) ##22	NXPE3 (ENSGACG00000019506) ##22	ENSGACG00000019505	ENSGACG00000019504	apex1 (ENSGACG00000019497)	osgep (ENSGACG00000019496)	si:ch211-214j24.10 (ENSGACG00000019495)	ENSGACG00000019494	cmah (ENSGACG00000019490)	cmah (ENSGACG00000019485)	krr1 (ENSGACG00000019481)	ENSGACG00000019480	nav3 (ENSGACG00000019472)	ENSGACG00000019470	e2f7 (ENSGACG00000019468)	csrp2 (ENSGACG00000019467)	zdhhc17 (ENSGACG00000019463)
Stickleback	MODERN SPECIES	3	ENSGACG00000018456	SH3TC2 (ENSGACG00000018457)	ablim3 (ENSGACG00000018461)	ENSGACG00000018464	ENSGACG00000018466	afap1l1a (ENSGACG00000018467)	ENSGACG00000018471	foxi3b (ENSGACG00000018474)	ENSGACG00000018475	WNT8A (ENSGACG00000018477)	gria1a (ENSGACG00000018480)	ENSGACG00000018483	ENSGACG00000018484	itk (ENSGACG00000018485)	cyfip2 (ENSGACG00000018487)	NXPE3 (ENSGACG00000018489) ##22	hmmr (ENSGACG00000018490)	TENM2 (ENSGACG00000018493)	zgc:165573 (ENSGACG00000018496)	eif4ebp3l (ENSGACG00000018498)	acsl4a (ENSGACG00000018503)	nxt2 (ENSGACG00000018508)	psmd10 (ENSGACG00000018509)	xiap (ENSGACG00000018511)	STAG2 (ENSGACG00000018514)	efnb1 (ENSGACG00000018523)	ENSGACG00000018525	msnb (ENSGACG00000018527)	zc4h2 (ENSGACG00000018529)	asb12b (ENSGACG00000018532)	ENSGACG00000018533
Lumpfish	MODERN SPECIES	15	apex1 (ENSCLMG00005010397)	ENSCLMG00005010398	ENSCLMG00005010401	BMAL2 (ENSCLMG00005010402)	stk38l (ENSCLMG00005010403)	med21 (ENSCLMG00005010429)	fgfr1op2 (ENSCLMG00005010431)	TM7SF3 (ENSCLMG00005010433)	gas2l3 (ENSCLMG00005010441)	arid2 (ENSCLMG00005010467)	ENSCLMG00005012141	slc38a2 (ENSCLMG00005012143)	slc38a4 (ENSCLMG00005012155)	ENSCLMG00005014298	ANO4 (ENSCLMG00005014300)	NXPE3 (ENSCLMG00005014303) ##22	mcm10 (ENSCLMG00005014306)	NXPE3 (ENSCLMG00005014362) ##22	zgc:162331 (ENSCLMG00005014364)	slc13a4 (ENSCLMG00005014366)	coa6 (ENSCLMG00005014369)	ENSCLMG00005014370	ENSCLMG00005014376	HBP1 (ENSCLMG00005014380)	pik3cg (ENSCLMG00005014400)	ENSCLMG00005015688	ano2b (ENSCLMG00005015689)	ntf3 (ENSCLMG00005015691)	pfkfb3 (ENSCLMG00005015769)	rbm17 (ENSCLMG00005019941)	ENSCLMG00005019943
Perciformes_a	ANCESTRAL SPECIES	19	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00980000203435	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a ##22	ENSGT00940000164836	ENSGT01070000253760.b.b.a.a.c.b	ENSGT00390000005508.a.b	ENSGT00530000063540.b	ENSGT00940000153744.B	ENSGT00390000009992	ENSGT01100000263519.D	ENSGT01060000248677	ENSGT00940000158014	ENSGT00510000047886.b	ENSGT00940000157713	ENSGT00940000154980	ENSGT00530000063074.b.b	ENSGT00940000156622	ENSGT00940000153362.a
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	20	fgfr1op2 (ENSSLUG00000023060)	TM7SF3 (ENSSLUG00000023063)	gas2l3 (ENSSLUG00000023083)	arid2 (ENSSLUG00000023098)	ENSSLUG00000023128	slc38a2 (ENSSLUG00000023182)	slc38a4 (ENSSLUG00000023732)	ENSSLUG00000023944	ANO4 (ENSSLUG00000005306)	NXPE3 (ENSSLUG00000005940) ##22	ENSSLUG00000005949	NXPE3 (ENSSLUG00000005962) ##22	ENSSLUG00000005973	selenoo2 (ENSSLUG00000005988)	NXPE3 (ENSSLUG00000006057) ##22	NXPE3 (ENSSLUG00000006065) ##22	ENSSLUG00000006069	ENSSLUG00000006076	apex1 (ENSSLUG00000006097)	osgep (ENSSLUG00000006113)	si:ch211-214j24.10 (ENSSLUG00000006133)	ENSSLUG00000006139	ENSSLUG00000006153	nav3 (ENSSLUG00000006236)	ENSSLUG00000006816	ENSSLUG00000006911	ENSSLUG00000006924	ENSSLUG00000006935	ENSSLUG00000006948	ENSSLUG00000006957	ENSSLUG00000006962
Pike perch	MODERN SPECIES	20	zgc:162331 (ENSSLUG00000023033)	BMAL2 (ENSSLUG00000023039)	stk38l (ENSSLUG00000023045)	med21 (ENSSLUG00000023056)	fgfr1op2 (ENSSLUG00000023060)	TM7SF3 (ENSSLUG00000023063)	gas2l3 (ENSSLUG00000023083)	arid2 (ENSSLUG00000023098)	ENSSLUG00000023128	slc38a2 (ENSSLUG00000023182)	slc38a4 (ENSSLUG00000023732)	ENSSLUG00000023944	ANO4 (ENSSLUG00000005306)	NXPE3 (ENSSLUG00000005940) ##22	ENSSLUG00000005949	NXPE3 (ENSSLUG00000005962) ##22	ENSSLUG00000005973	selenoo2 (ENSSLUG00000005988)	NXPE3 (ENSSLUG00000006057) ##22	NXPE3 (ENSSLUG00000006065) ##22	ENSSLUG00000006069	ENSSLUG00000006076	apex1 (ENSSLUG00000006097)	osgep (ENSSLUG00000006113)	si:ch211-214j24.10 (ENSSLUG00000006133)	ENSSLUG00000006139	ENSSLUG00000006153	nav3 (ENSSLUG00000006236)	ENSSLUG00000006816	ENSSLUG00000006911	ENSSLUG00000006924
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	20	coa6 (ENSSLUG00000023018)	slc13a4 (ENSSLUG00000023024)	zgc:162331 (ENSSLUG00000023033)	BMAL2 (ENSSLUG00000023039)	stk38l (ENSSLUG00000023045)	med21 (ENSSLUG00000023056)	fgfr1op2 (ENSSLUG00000023060)	TM7SF3 (ENSSLUG00000023063)	gas2l3 (ENSSLUG00000023083)	arid2 (ENSSLUG00000023098)	ENSSLUG00000023128	slc38a2 (ENSSLUG00000023182)	slc38a4 (ENSSLUG00000023732)	ENSSLUG00000023944	ANO4 (ENSSLUG00000005306)	NXPE3 (ENSSLUG00000005940) ##22	ENSSLUG00000005949	NXPE3 (ENSSLUG00000005962) ##22	ENSSLUG00000005973	selenoo2 (ENSSLUG00000005988)	NXPE3 (ENSSLUG00000006057) ##22	NXPE3 (ENSSLUG00000006065) ##22	ENSSLUG00000006069	ENSSLUG00000006076	apex1 (ENSSLUG00000006097)	osgep (ENSSLUG00000006113)	si:ch211-214j24.10 (ENSSLUG00000006133)	ENSSLUG00000006139	ENSSLUG00000006153	nav3 (ENSSLUG00000006236)	ENSSLUG00000006816
Pike perch	MODERN SPECIES	20	med21 (ENSSLUG00000023056)	fgfr1op2 (ENSSLUG00000023060)	TM7SF3 (ENSSLUG00000023063)	gas2l3 (ENSSLUG00000023083)	arid2 (ENSSLUG00000023098)	ENSSLUG00000023128	slc38a2 (ENSSLUG00000023182)	slc38a4 (ENSSLUG00000023732)	ENSSLUG00000023944	ANO4 (ENSSLUG00000005306)	NXPE3 (ENSSLUG00000005940) ##22	ENSSLUG00000005949	NXPE3 (ENSSLUG00000005962) ##22	ENSSLUG00000005973	selenoo2 (ENSSLUG00000005988)	NXPE3 (ENSSLUG00000006057) ##22	NXPE3 (ENSSLUG00000006065) ##22	ENSSLUG00000006069	ENSSLUG00000006076	apex1 (ENSSLUG00000006097)	osgep (ENSSLUG00000006113)	si:ch211-214j24.10 (ENSSLUG00000006133)	ENSSLUG00000006139	ENSSLUG00000006153	nav3 (ENSSLUG00000006236)	ENSSLUG00000006816	ENSSLUG00000006911	ENSSLUG00000006924	ENSSLUG00000006935	ENSSLUG00000006948	ENSSLUG00000006957
Pike perch	MODERN SPECIES	20	sbf1 (ENSSLUG00000013941)	ppp6r2a (ENSSLUG00000012980)	cbll1 (ENSSLUG00000012902)	ENSSLUG00000012889	SLC26A3 (ENSSLUG00000011420)	slc26a5 (ENSSLUG00000009464)	psmc2 (ENSSLUG00000009275)	dnajc2 (ENSSLUG00000009244)	pmpcb (ENSSLUG00000009226)	phax (ENSSLUG00000009220)	kcnc2 (ENSSLUG00000009211)	ENSSLUG00000009201	cmah (ENSSLUG00000008672)	GLIPR1 (ENSSLUG00000008634)	krr1 (ENSSLUG00000008617)	NXPE3 (ENSSLUG00000008605) ##22	ENSSLUG00000008596	ENSSLUG00000008555	phlda1 (ENSSLUG00000008541)	nap1l1 (ENSSLUG00000008083)	OSBPL8 (ENSSLUG00000007797)	zdhhc17 (ENSSLUG00000007177)	csrp2 (ENSSLUG00000007078)	ENSSLUG00000007063	ENSSLUG00000007045	ENSSLUG00000007016	ENSSLUG00000007003	ENSSLUG00000006990	ENSSLUG00000006982	ENSSLUG00000006970	ENSSLUG00000006962
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	19	setmar (ENSCGOG00000021226)	lrrn1 (ENSCGOG00000021224)	ENSCGOG00000021223	trnt1 (ENSCGOG00000021203)	arl6ip5a (ENSCGOG00000021199)	FRMD4B (ENSCGOG00000021135)	mitfa (ENSCGOG00000021055)	zgc:113054 (ENSCGOG00000021042)	foxp1b (ENSCGOG00000020445)	EIF4E3 (ENSCGOG00000020423)	gpr27 (ENSCGOG00000020421)	prok2 (ENSCGOG00000020420)	ENSCGOG00000020419 ##22	ENSCGOG00000020418 ##22	NXPE3 (ENSCGOG00000020414) ##22	NXPE3 (ENSCGOG00000020413) ##22	ENSCGOG00000020411 ##22	NXPE3 (ENSCGOG00000020409) ##22	rybpa (ENSCGOG00000020403)	shq1 (ENSCGOG00000020389)	gxylt2 (ENSCGOG00000020385)	ppp4r2b (ENSCGOG00000020375)	pdzrn3b (ENSCGOG00000020351)	ENSCGOG00000019605	ENSCGOG00000019577	ENSCGOG00000017817	ENSCGOG00000017020	cntn4 (ENSCGOG00000013869)	ENSCGOG00000013152	ENSCGOG00000013047	cdk5rap1 (ENSCGOG00000012950)
Channel bull blenny	MODERN SPECIES	19	lrrn1 (ENSCGOG00000021224)	ENSCGOG00000021223	trnt1 (ENSCGOG00000021203)	arl6ip5a (ENSCGOG00000021199)	FRMD4B (ENSCGOG00000021135)	mitfa (ENSCGOG00000021055)	zgc:113054 (ENSCGOG00000021042)	foxp1b (ENSCGOG00000020445)	EIF4E3 (ENSCGOG00000020423)	gpr27 (ENSCGOG00000020421)	prok2 (ENSCGOG00000020420)	ENSCGOG00000020419 ##22	ENSCGOG00000020418 ##22	NXPE3 (ENSCGOG00000020414) ##22	NXPE3 (ENSCGOG00000020413) ##22	ENSCGOG00000020411 ##22	NXPE3 (ENSCGOG00000020409) ##22	rybpa (ENSCGOG00000020403)	shq1 (ENSCGOG00000020389)	gxylt2 (ENSCGOG00000020385)	ppp4r2b (ENSCGOG00000020375)	pdzrn3b (ENSCGOG00000020351)	ENSCGOG00000019605	ENSCGOG00000019577	ENSCGOG00000017817	ENSCGOG00000017020	cntn4 (ENSCGOG00000013869)	ENSCGOG00000013152	ENSCGOG00000013047	cdk5rap1 (ENSCGOG00000012950)	ghrh (ENSCGOG00000012944)
Channel bull blenny	MODERN SPECIES	19	ITPR1 (ENSCGOG00000021328)	setmar (ENSCGOG00000021226)	lrrn1 (ENSCGOG00000021224)	ENSCGOG00000021223	trnt1 (ENSCGOG00000021203)	arl6ip5a (ENSCGOG00000021199)	FRMD4B (ENSCGOG00000021135)	mitfa (ENSCGOG00000021055)	zgc:113054 (ENSCGOG00000021042)	foxp1b (ENSCGOG00000020445)	EIF4E3 (ENSCGOG00000020423)	gpr27 (ENSCGOG00000020421)	prok2 (ENSCGOG00000020420)	ENSCGOG00000020419 ##22	ENSCGOG00000020418 ##22	NXPE3 (ENSCGOG00000020414) ##22	NXPE3 (ENSCGOG00000020413) ##22	ENSCGOG00000020411 ##22	NXPE3 (ENSCGOG00000020409) ##22	rybpa (ENSCGOG00000020403)	shq1 (ENSCGOG00000020389)	gxylt2 (ENSCGOG00000020385)	ppp4r2b (ENSCGOG00000020375)	pdzrn3b (ENSCGOG00000020351)	ENSCGOG00000019605	ENSCGOG00000019577	ENSCGOG00000017817	ENSCGOG00000017020	cntn4 (ENSCGOG00000013869)	ENSCGOG00000013152	ENSCGOG00000013047
Channel bull blenny	MODERN SPECIES	19	ENSCGOG00000023674	ITPR1 (ENSCGOG00000021328)	setmar (ENSCGOG00000021226)	lrrn1 (ENSCGOG00000021224)	ENSCGOG00000021223	trnt1 (ENSCGOG00000021203)	arl6ip5a (ENSCGOG00000021199)	FRMD4B (ENSCGOG00000021135)	mitfa (ENSCGOG00000021055)	zgc:113054 (ENSCGOG00000021042)	foxp1b (ENSCGOG00000020445)	EIF4E3 (ENSCGOG00000020423)	gpr27 (ENSCGOG00000020421)	prok2 (ENSCGOG00000020420)	ENSCGOG00000020419 ##22	ENSCGOG00000020418 ##22	NXPE3 (ENSCGOG00000020414) ##22	NXPE3 (ENSCGOG00000020413) ##22	ENSCGOG00000020411 ##22	NXPE3 (ENSCGOG00000020409) ##22	rybpa (ENSCGOG00000020403)	shq1 (ENSCGOG00000020389)	gxylt2 (ENSCGOG00000020385)	ppp4r2b (ENSCGOG00000020375)	pdzrn3b (ENSCGOG00000020351)	ENSCGOG00000019605	ENSCGOG00000019577	ENSCGOG00000017817	ENSCGOG00000017020	cntn4 (ENSCGOG00000013869)	ENSCGOG00000013152
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	19	bhlhe40 (ENSCGOG00000023677)	ENSCGOG00000023674	ITPR1 (ENSCGOG00000021328)	setmar (ENSCGOG00000021226)	lrrn1 (ENSCGOG00000021224)	ENSCGOG00000021223	trnt1 (ENSCGOG00000021203)	arl6ip5a (ENSCGOG00000021199)	FRMD4B (ENSCGOG00000021135)	mitfa (ENSCGOG00000021055)	zgc:113054 (ENSCGOG00000021042)	foxp1b (ENSCGOG00000020445)	EIF4E3 (ENSCGOG00000020423)	gpr27 (ENSCGOG00000020421)	prok2 (ENSCGOG00000020420)	ENSCGOG00000020419 ##22	ENSCGOG00000020418 ##22	NXPE3 (ENSCGOG00000020414) ##22	NXPE3 (ENSCGOG00000020413) ##22	ENSCGOG00000020411 ##22	NXPE3 (ENSCGOG00000020409) ##22	rybpa (ENSCGOG00000020403)	shq1 (ENSCGOG00000020389)	gxylt2 (ENSCGOG00000020385)	ppp4r2b (ENSCGOG00000020375)	pdzrn3b (ENSCGOG00000020351)	ENSCGOG00000019605	ENSCGOG00000019577	ENSCGOG00000017817	ENSCGOG00000017020	cntn4 (ENSCGOG00000013869)
Channel bull blenny	MODERN SPECIES	19	rpn2 (ENSCGOG00000011889)	ghrh (ENSCGOG00000012944)	cdk5rap1 (ENSCGOG00000012950)	ENSCGOG00000013047	ENSCGOG00000013152	cntn4 (ENSCGOG00000013869)	ENSCGOG00000017020	ENSCGOG00000017817	ENSCGOG00000019577	ENSCGOG00000019605	pdzrn3b (ENSCGOG00000020351)	ppp4r2b (ENSCGOG00000020375)	gxylt2 (ENSCGOG00000020385)	shq1 (ENSCGOG00000020389)	rybpa (ENSCGOG00000020403)	NXPE3 (ENSCGOG00000020409) ##22	ENSCGOG00000020411 ##22	NXPE3 (ENSCGOG00000020413) ##22	NXPE3 (ENSCGOG00000020414) ##22	ENSCGOG00000020418 ##22	ENSCGOG00000020419 ##22	prok2 (ENSCGOG00000020420)	gpr27 (ENSCGOG00000020421)	EIF4E3 (ENSCGOG00000020423)	foxp1b (ENSCGOG00000020445)	zgc:113054 (ENSCGOG00000021042)	mitfa (ENSCGOG00000021055)	FRMD4B (ENSCGOG00000021135)	arl6ip5a (ENSCGOG00000021199)	trnt1 (ENSCGOG00000021203)	ENSCGOG00000021223
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	14	ENSCGOG00000015987	zgc:100846 (ENSCGOG00000015899)	lingo2b (ENSCGOG00000015890)	eif4eb (ENSCGOG00000015795)	metap1 (ENSCGOG00000015467)	ENSCGOG00000015456	adh5 (ENSCGOG00000015301)	ENSCGOG00000015289	ENSCGOG00000015287	ENSCGOG00000015284	ENSCGOG00000015031	SPTLC2 (ENSCGOG00000014312)	LRFN5 (ENSCGOG00000014239)	ENSCGOG00000014230	ENSCGOG00000014227 ##22	NXPE3 (ENSCGOG00000014208) ##22	FBXO33 (ENSCGOG00000014206)	pnn (ENSCGOG00000014200)	gemin2 (ENSCGOG00000014169)	ENSCGOG00000014142	ENSCGOG00000014115	RALGAPA1 (ENSCGOG00000013439)	INSM2 (ENSCGOG00000013403)	nfkbiab (ENSCGOG00000013399)	psma6a (ENSCGOG00000013292)	PRORP (ENSCGOG00000013286)	ppp2r3c (ENSCGOG00000013248)	fam177a1 (ENSCGOG00000013245)	ttc7b (ENSCGOG00000010748)	ENSCGOG00000010708	ENSCGOG00000010705
Channel bull blenny	MODERN SPECIES	14	sntg2 (ENSCGOG00000016080)	ENSCGOG00000015987	zgc:100846 (ENSCGOG00000015899)	lingo2b (ENSCGOG00000015890)	eif4eb (ENSCGOG00000015795)	metap1 (ENSCGOG00000015467)	ENSCGOG00000015456	adh5 (ENSCGOG00000015301)	ENSCGOG00000015289	ENSCGOG00000015287	ENSCGOG00000015284	ENSCGOG00000015031	SPTLC2 (ENSCGOG00000014312)	LRFN5 (ENSCGOG00000014239)	ENSCGOG00000014230	ENSCGOG00000014227 ##22	NXPE3 (ENSCGOG00000014208) ##22	FBXO33 (ENSCGOG00000014206)	pnn (ENSCGOG00000014200)	gemin2 (ENSCGOG00000014169)	ENSCGOG00000014142	ENSCGOG00000014115	RALGAPA1 (ENSCGOG00000013439)	INSM2 (ENSCGOG00000013403)	nfkbiab (ENSCGOG00000013399)	psma6a (ENSCGOG00000013292)	PRORP (ENSCGOG00000013286)	ppp2r3c (ENSCGOG00000013248)	fam177a1 (ENSCGOG00000013245)	ttc7b (ENSCGOG00000010748)	ENSCGOG00000010708
Euacanthomorphacea	DUPLICATION
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.a ##22
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	15	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005023697	ENSMMDG00005023700	ENSMMDG00005023703	osgep (ENSMMDG00005023706)	apex1 (ENSMMDG00005023711)	ENSMMDG00005023715	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023722	ENSMMDG00005023725	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023729 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023731 ##22	NXPE3 (ENSMMDG00005023732) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023735) ##22	ENSMMDG00005023739 ##22	ENSMMDG00005023740 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023744 ##22	ENSMMDG00005023745 ##22	NXPE3 (ENSMMDG00005023746) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023761) ##22	ENSMMDG00005023764	ENSMMDG00005023765 ##22	NXPE3 (ENSMMDG00005023767) ##22
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	15	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703	ENSMMDG00005023700	ENSMMDG00005023697	nav3 (ENSMMDG00005023694)	ENSMMDG00005023689	ENSMMDG00005023687
Pinecone sodierfish	MODERN SPECIES	15	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703	ENSMMDG00005023700	ENSMMDG00005023697	nav3 (ENSMMDG00005023694)	ENSMMDG00005023689	ENSMMDG00005023687	ENSMMDG00005023684
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005024048	BMAL2 (ENSMMDG00005024042)	stk38l (ENSMMDG00005024036)	med21 (ENSMMDG00005024030)	fgfr1op2 (ENSMMDG00005024027)	TM7SF3 (ENSMMDG00005024025)	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	15	fgfr1op2 (ENSMMDG00005024027)	TM7SF3 (ENSMMDG00005024025)	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005024050	ENSMMDG00005024048	BMAL2 (ENSMMDG00005024042)	stk38l (ENSMMDG00005024036)	med21 (ENSMMDG00005024030)	fgfr1op2 (ENSMMDG00005024027)	TM7SF3 (ENSMMDG00005024025)	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	15	med21 (ENSMMDG00005024030)	fgfr1op2 (ENSMMDG00005024027)	TM7SF3 (ENSMMDG00005024025)	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22
Pinecone sodierfish	MODERN SPECIES	15	stk38l (ENSMMDG00005024036)	med21 (ENSMMDG00005024030)	fgfr1op2 (ENSMMDG00005024027)	TM7SF3 (ENSMMDG00005024025)	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22
Pinecone sodierfish	MODERN SPECIES	15	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703	ENSMMDG00005023700	ENSMMDG00005023697	nav3 (ENSMMDG00005023694)	ENSMMDG00005023689	ENSMMDG00005023687	ENSMMDG00005023684	ENSMMDG00005023681
Pinecone sodierfish	MODERN SPECIES	15	TM7SF3 (ENSMMDG00005024025)	ENSMMDG00005024022	gas2l3 (ENSMMDG00005024020)	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	15	nav3 (ENSMMDG00005023694)	ENSMMDG00005023697	ENSMMDG00005023700	ENSMMDG00005023703	osgep (ENSMMDG00005023706)	apex1 (ENSMMDG00005023711)	ENSMMDG00005023715	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023722	ENSMMDG00005023725	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023729 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023731 ##22	NXPE3 (ENSMMDG00005023732) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023735) ##22	ENSMMDG00005023739 ##22	ENSMMDG00005023740 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023744 ##22	ENSMMDG00005023745 ##22	NXPE3 (ENSMMDG00005023746) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023761) ##22	ENSMMDG00005023764	ENSMMDG00005023765 ##22
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703	ENSMMDG00005023700	ENSMMDG00005023697	nav3 (ENSMMDG00005023694)	ENSMMDG00005023689
Pinecone sodierfish	MODERN SPECIES	15	arid2 (ENSMMDG00005023798)	ENSMMDG00005023787	slc38a2 (ENSMMDG00005023780)	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	15	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703	ENSMMDG00005023700
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703
Pinecone sodierfish	MODERN SPECIES	15	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)	ENSMMDG00005023703	ENSMMDG00005023700	ENSMMDG00005023697	nav3 (ENSMMDG00005023694)	ENSMMDG00005023689	ENSMMDG00005023687	ENSMMDG00005023684	ENSMMDG00005023681	ENSMMDG00005023678
Pinecone sodierfish	MODERN SPECIES	15	apex1 (ENSMMDG00005023711)	ENSMMDG00005023715	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023722	ENSMMDG00005023725	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023729 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023731 ##22	NXPE3 (ENSMMDG00005023732) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023735) ##22	ENSMMDG00005023739 ##22	ENSMMDG00005023740 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023744 ##22	ENSMMDG00005023745 ##22	NXPE3 (ENSMMDG00005023746) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023761) ##22	ENSMMDG00005023764	ENSMMDG00005023765 ##22	NXPE3 (ENSMMDG00005023767) ##22	ANO4 (ENSMMDG00005023770)	ENSMMDG00005023774	slc38a4 (ENSMMDG00005023776)	slc38a2 (ENSMMDG00005023780)
Euacanthomorphacea	DUPLICATION
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.a ##22
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005023715	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023722	ENSMMDG00005023725	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023729 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023731 ##22	NXPE3 (ENSMMDG00005023732) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023735) ##22	ENSMMDG00005023739 ##22	ENSMMDG00005023740 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023744 ##22	ENSMMDG00005023745 ##22	NXPE3 (ENSMMDG00005023746) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023761) ##22	ENSMMDG00005023764	ENSMMDG00005023765 ##22	NXPE3 (ENSMMDG00005023767) ##22	ANO4 (ENSMMDG00005023770)	ENSMMDG00005023774	slc38a4 (ENSMMDG00005023776)	slc38a2 (ENSMMDG00005023780)	ENSMMDG00005023787
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.a ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.a ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.a ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.a ##22
Ballan wrasse	MODERN SPECIES	2929															ENSLBEG00000023048	ENSLBEG00000023062 ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.a.b.b.b ##22
Pinecone sodierfish	MODERN SPECIES	15	slc38a4 (ENSMMDG00005023776)	ENSMMDG00005023774	ANO4 (ENSMMDG00005023770)	NXPE3 (ENSMMDG00005023767) ##22	ENSMMDG00005023765 ##22	ENSMMDG00005023764	NXPE3 (ENSMMDG00005023761) ##22	NXPE3 (ENSMMDG00005023756) ##22	NXPE3 (ENSMMDG00005023753) ##22	NXPE3 (ENSMMDG00005023750) ##22	NXPE3 (ENSMMDG00005023749) ##22	NXPE3 (ENSMMDG00005023748) ##22	NXPE3 (ENSMMDG00005023746) ##22	ENSMMDG00005023745 ##22	ENSMMDG00005023744 ##22	NXPE3 (ENSMMDG00005023742) ##22	ENSMMDG00005023740 ##22	ENSMMDG00005023739 ##22	NXPE3 (ENSMMDG00005023735) ##22	NXPE3 (ENSMMDG00005023734) ##22	NXPE3 (ENSMMDG00005023732) ##22	ENSMMDG00005023731 ##22	ENSMMDG00005023730 ##22	ENSMMDG00005023729 ##22	NXPE3 (ENSMMDG00005023728) ##22	ENSMMDG00005023725	ENSMMDG00005023722	SELENOO (ENSMMDG00005023719)	ENSMMDG00005023715	apex1 (ENSMMDG00005023711)	osgep (ENSMMDG00005023706)
Euteleostomi	DUPLICATION
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.a ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	681																ENSLBEG00000014382 ##22	ENSLBEG00000014355 ##22	ENSLBEG00000014325	ENSLBEG00000014288 ##22
Ballan wrasse	MODERN SPECIES	4724																ENSLBEG00000005401 ##22
Ballan wrasse	MODERN SPECIES	365					nav3 (ENSLBEG00000010622)	ENSLBEG00000010578	ENSLBEG00000010428	si:ch211-214j24.10 (ENSLBEG00000010360)	osgep (ENSLBEG00000010303)	apex1 (ENSLBEG00000010248)	ENSLBEG00000010207	SELENOO (ENSLBEG00000010158)	ENSLBEG00000010129	ENSLBEG00000010103 ##22	ENSLBEG00000010060 ##22	ENSLBEG00000010028 ##22	ENSLBEG00000010004 ##22
Ballan wrasse	MODERN SPECIES	147															cbln1 (ENSLBEG00000004530)	ENSLBEG00000004559 ##22	si:ch211-212o1.2 (ENSLBEG00000004580)	znf423 (ENSLBEG00000004636)	ENSLBEG00000004690	cnot1 (ENSLBEG00000004740)	setd6 (ENSLBEG00000004879)	bbs2 (ENSLBEG00000004966)	B3GNT9 (ENSLBEG00000005045)	phaf1 (ENSLBEG00000005067)	cbfb (ENSLBEG00000005109)	gnao1a (ENSLBEG00000005154)	hsf4 (ENSLBEG00000005192)	cyp2x9 (ENSLBEG00000005231)	psme3ip1 (ENSLBEG00000005283)	cpne2 (ENSLBEG00000005327)	ENSLBEG00000005408
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	2303																ENSLBEG00000020999 ##22
Ballan wrasse	MODERN SPECIES	1060																ENSLBEG00000015153 ##22	ENSLBEG00000015136 ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1150																ENSLBEG00000026671 ##22	ENSLBEG00000026686 ##22
Ballan wrasse	MODERN SPECIES	1804																ENSLBEG00000023706 ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	833														cmah (ENSLBEG00000015302)	ENSLBEG00000015341 ##22	ENSLBEG00000015383 ##22
Ballan wrasse	MODERN SPECIES	1224														ENSLBEG00000014719	ENSLBEG00000014737 ##22	ENSLBEG00000014764 ##22
Ballan wrasse	MODERN SPECIES	1368																ENSLBEG00000000826 ##22	ENSLBEG00000000847 ##22
Ballan wrasse	MODERN SPECIES	681																ENSLBEG00000014288 ##22	ENSLBEG00000014325	ENSLBEG00000014355 ##22	ENSLBEG00000014382 ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	409			zgc:162331 (ENSLBEG00000025326)	BMAL2 (ENSLBEG00000025301)	stk38l (ENSLBEG00000025255)	med21 (ENSLBEG00000025229)	fgfr1op2 (ENSLBEG00000025213)	TM7SF3 (ENSLBEG00000025190)	gas2l3 (ENSLBEG00000025164)	arid2 (ENSLBEG00000025089)	ENSLBEG00000025033	slc38a2 (ENSLBEG00000025003)	slc38a4 (ENSLBEG00000024951)	ENSLBEG00000024919	ANO4 (ENSLBEG00000024864)	ENSLBEG00000024830 ##22
Ballan wrasse	MODERN SPECIES	681															ENSLBEG00000014382 ##22	ENSLBEG00000014355 ##22	ENSLBEG00000014325	ENSLBEG00000014288 ##22
Ballan wrasse	MODERN SPECIES	1295																ENSLBEG00000023864 ##22
Ballan wrasse	MODERN SPECIES	1452																ENSLBEG00000008775 ##22
Ballan wrasse	MODERN SPECIES	1224															ENSLBEG00000014719	ENSLBEG00000014737 ##22	ENSLBEG00000014764 ##22
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.a ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	3524																ENSLBEG00000013256 ##22
Ballan wrasse	MODERN SPECIES	365													ENSLBEG00000010004 ##22	ENSLBEG00000010028 ##22	ENSLBEG00000010060 ##22	ENSLBEG00000010103 ##22	ENSLBEG00000010129	SELENOO (ENSLBEG00000010158)	ENSLBEG00000010207	apex1 (ENSLBEG00000010248)	osgep (ENSLBEG00000010303)	si:ch211-214j24.10 (ENSLBEG00000010360)	ENSLBEG00000010428	ENSLBEG00000010578	nav3 (ENSLBEG00000010622)
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	3618																ENSLBEG00000007570 ##22
Ballan wrasse	MODERN SPECIES	2557																ENSLBEG00000014435 ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	833															cmah (ENSLBEG00000015302)	ENSLBEG00000015341 ##22	ENSLBEG00000015383 ##22
Ballan wrasse	MODERN SPECIES	2877																ENSLBEG00000020309 ##22
Ballan wrasse	MODERN SPECIES	2109																ENSLBEG00000007268 ##22
Ballan wrasse	MODERN SPECIES	1725															ENSLBEG00000017636	ENSLBEG00000017670 ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1150															ENSLBEG00000026671 ##22	ENSLBEG00000026686 ##22
Ballan wrasse	MODERN SPECIES	1842																ENSLBEG00000000285 ##22
Ballan wrasse	MODERN SPECIES	1923																ENSLBEG00000007057 ##22
Ballan wrasse	MODERN SPECIES	3731																ENSLBEG00000013289 ##22
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1368															ENSLBEG00000000826 ##22	ENSLBEG00000000847 ##22
Ballan wrasse	MODERN SPECIES	365														ENSLBEG00000010004 ##22	ENSLBEG00000010028 ##22	ENSLBEG00000010060 ##22	ENSLBEG00000010103 ##22	ENSLBEG00000010129	SELENOO (ENSLBEG00000010158)	ENSLBEG00000010207	apex1 (ENSLBEG00000010248)	osgep (ENSLBEG00000010303)	si:ch211-214j24.10 (ENSLBEG00000010360)	ENSLBEG00000010428	ENSLBEG00000010578	nav3 (ENSLBEG00000010622)
Ballan wrasse	DUPLICATION
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1467																ENSLBEG00000009579 ##22
Ballan wrasse	MODERN SPECIES	1601															ENSLBEG00000006638 ##22	ENSLBEG00000006621 ##22
Ballan wrasse	MODERN SPECIES	1060															ENSLBEG00000015153 ##22	ENSLBEG00000015136 ##22
Ballan wrasse	MODERN SPECIES	365				nav3 (ENSLBEG00000010622)	ENSLBEG00000010578	ENSLBEG00000010428	si:ch211-214j24.10 (ENSLBEG00000010360)	osgep (ENSLBEG00000010303)	apex1 (ENSLBEG00000010248)	ENSLBEG00000010207	SELENOO (ENSLBEG00000010158)	ENSLBEG00000010129	ENSLBEG00000010103 ##22	ENSLBEG00000010060 ##22	ENSLBEG00000010028 ##22	ENSLBEG00000010004 ##22
Ballan wrasse	MODERN SPECIES	220	si:ch211-132b12.2 (ENSLBEG00000018820)	ccnp (ENSLBEG00000018795)	akt2 (ENSLBEG00000018761)	DHX40 (ENSLBEG00000018707)	P2RX5 (ENSLBEG00000018679)	samsn1a (ENSLBEG00000018651)	hspa13 (ENSLBEG00000018639)	GDPD5 (ENSLBEG00000018595)	serpinh1b (ENSLBEG00000018560)	gucy2f (ENSLBEG00000018450)	tsku (ENSLBEG00000018411)	ENSLBEG00000018356	ENSLBEG00000018249	ENSLBEG00000017925	ENSLBEG00000017727	ENSLBEG00000017668 ##22	tbrg1 (ENSLBEG00000017559)	siae (ENSLBEG00000017502)
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Ballan wrasse	MODERN SPECIES	1601																ENSLBEG00000006638 ##22	ENSLBEG00000006621 ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.a.b.b ##22
Leishan spiny toad	MODERN SPECIES	1	C11orf98 (ENSLLEG00000029057)	CSKMT (ENSLLEG00000029072)	ENSLLEG00000029081	ENSLLEG00000029099	UBXN1 (ENSLLEG00000029109)	TESMIN (ENSLLEG00000029142)	ENSLLEG00000029172	ENSLLEG00000029178	GAL (ENSLLEG00000029187)	LRP5 (ENSLLEG00000029281)	ENSLLEG00000029606	ENSLLEG00000029615	KMT5B (ENSLLEG00000029633)	CHKA (ENSLLEG00000029689)	ENSLLEG00000029724	ENSLLEG00000008324 ##22	ENSLLEG00000008358	ENSLLEG00000008466	ENSLLEG00000008673 #22	ENSLLEG00000008723	ENSLLEG00000008794 #22	FOSL1 (ENSLLEG00000008852)	CCDC85B (ENSLLEG00000008892)	FIBP (ENSLLEG00000008926)	EFEMP2 (ENSLLEG00000009106)	MUS81 (ENSLLEG00000009192)	ENSLLEG00000009532	DSTN (ENSLLEG00000009564)	ENSLLEG00000009601	OVOL1 (ENSLLEG00000009629)	ENSLLEG00000009763
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.a.c.b.b.b ##22
Ballan wrasse	MODERN SPECIES	335								e2f7 (ENSLBEG00000000921)	csrp2 (ENSLBEG00000000897)	zdhhc17 (ENSLBEG00000000831)	OSBPL8 (ENSLBEG00000000738)	nap1l1 (ENSLBEG00000000121)	phlda1 (ENSLBEG00000000095)	ENSLBEG00000000084	ENSLBEG00000026859	ENSLBEG00000026841 ##22	krr1 (ENSLBEG00000026823)	ENSLBEG00000026811	cmah (ENSLBEG00000026801)
Euteleostomi	ANCESTRAL SPECIES	89	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000005596	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000164443.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00940000162847	ENSGT00940000153998.a
Sarcopterygii	ANCESTRAL SPECIES	115	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000005596	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000164443.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592
Tetrapoda	ANCESTRAL SPECIES	104				ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000164443.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000171984	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a	ENSGT01100000263488.a.b.b	ENSGT00940000156028
Amniota	ANCESTRAL SPECIES		ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a	ENSGT01000000215044
Sauria	ANCESTRAL SPECIES	2	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00960000189776	ENSGT00390000005575	ENSGT00940000162847
Archelosauria	ANCESTRAL SPECIES	30	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441
Aves	ANCESTRAL SPECIES		ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441	ENSGT00940000162847
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441	ENSGT00940000162847
Neognathae_b	ANCESTRAL SPECIES		ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441	ENSGT00940000162847
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00550000074838	ENSGT00940000157095	ENSGT01050000245137	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441	ENSGT00940000162847
Golden eagle	MODERN SPECIES	23	NIT2 (ENSACCG00020002763)	TOMM70 (ENSACCG00020002789)	ENSACCG00020002803	TMEM45A (ENSACCG00020002812)	TFG (ENSACCG00020002832)	ABI3BP (ENSACCG00020002939)	IMPG2 (ENSACCG00020003068)	SENP7 (ENSACCG00020003115)	ENSACCG00020003166	TXNL4B (ENSACCG00020003177)	TRMT10C (ENSACCG00020003184)	PCNP (ENSACCG00020003191)	ZBTB11 (ENSACCG00020003212)	RPL24 (ENSACCG00020003233)	CEP97 (ENSACCG00020003251)	NXPE3 (ENSACCG00020003287) ##22	NFKBIZ (ENSACCG00020003301)	ZPLD1 (ENSACCG00020003331)	ALCAM (ENSACCG00020003362)	CBLB (ENSACCG00020003393)	BBX (ENSACCG00020003439)	CD47 (ENSACCG00020003521)	IFT57 (ENSACCG00020003579)	HHLA2 (ENSACCG00020003610)	ENSACCG00020003858	CIP2A (ENSACCG00020004014)	ENSACCG00020004034	TRAT1 (ENSACCG00020004049)	ENSACCG00020005163	ENSACCG00020005175	GUCA1C (ENSACCG00020005181)
Kakapo	MODERN SPECIES	11	TBC1D23 (ENSSHBG00005001546)	NIT2 (ENSSHBG00005001531)	TOMM70 (ENSSHBG00005001509)	ENSSHBG00005001498	TMEM45A (ENSSHBG00005001448)	TFG (ENSSHBG00005001383)	IMPG2 (ENSSHBG00005001348)	SENP7 (ENSSHBG00005001312)	ENSSHBG00005001302	TXNL4B (ENSSHBG00005001295)	TRMT10C (ENSSHBG00005001292)	PCNP (ENSSHBG00005001288)	ZBTB11 (ENSSHBG00005001284)	RPL24 (ENSSHBG00005001280)	CEP97 (ENSSHBG00005001267)	NXPE3 (ENSSHBG00005018145) ##22	NFKBIZ (ENSSHBG00005018136)	ENSSHBG00005018129
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00960000189776	ENSGT00960000189441	ENSGT00390000005575
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.a	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847	ENSGT00940000156028
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.a	ENSGT00530000063907.d.b	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847	ENSGT00940000156028
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.a	ENSGT00530000063907.d.b	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847	ENSGT00940000156028
Common canary	MODERN SPECIES	33	NIT2 (ENSSCAG00000016724)	TOMM70 (ENSSCAG00000016729)	LNP1 (ENSSCAG00000016742)	TMEM45A (ENSSCAG00000016743)	TFG (ENSSCAG00000016747)	ABI3BP (ENSSCAG00000016762)	IMPG2 (ENSSCAG00000016805)	SENP7 (ENSSCAG00000016808)	ENSSCAG00000016810	TXNL4B (ENSSCAG00000016811)	TRMT10C (ENSSCAG00000016812)	PCNP (ENSSCAG00000016813)	ZBTB11 (ENSSCAG00000016816)	RPL24 (ENSSCAG00000016819)	CEP97 (ENSSCAG00000016820)	NXPE3 (ENSSCAG00000016823) ##22	NFKBIZ (ENSSCAG00000016828)	ZPLD1 (ENSSCAG00000016831)	ALCAM (ENSSCAG00000016835)	CBLB (ENSSCAG00000016839)	BBX (ENSSCAG00000016843)	CD47 (ENSSCAG00000016846)	IFT57 (ENSSCAG00000016848)	HHLA2 (ENSSCAG00000016849)	ENSSCAG00000016874	CIP2A (ENSSCAG00000016905)	ENSSCAG00000016906	TRAT1 (ENSSCAG00000016909)	ENSSCAG00000016910	GUCA1C (ENSSCAG00000016911)	ENSSCAG00000016917
Medium ground finch	MODERN SPECIES	94	TOMM70 (ENSGFOG00000000736)	LNP1 (ENSGFOG00000000756)	TMEM45A (ENSGFOG00000000765)	TFG (ENSGFOG00000000773)	ABI3BP (ENSGFOG00000000801)	IMPG2 (ENSGFOG00000000994)	SENP7 (ENSGFOG00000001008)	ENSGFOG00000001028	TXNL4B (ENSGFOG00000001036)	TRMT10C (ENSGFOG00000001042)	PCNP (ENSGFOG00000001048)	ENSGFOG00000001054	ENSGFOG00000001061	RPL24 (ENSGFOG00000001070)	CEP97 (ENSGFOG00000001080)	NXPE3 (ENSGFOG00000001096) ##22	NFKBIZ (ENSGFOG00000001114)	ZPLD1 (ENSGFOG00000001123)	ALCAM (ENSGFOG00000001138)	ENSGFOG00000001155	ENSGFOG00000001159	BBX (ENSGFOG00000001169)	CD47 (ENSGFOG00000001203)	IFT57 (ENSGFOG00000001217)	HHLA2 (ENSGFOG00000001232)	ENSGFOG00000001291	CIP2A (ENSGFOG00000001477)	ENSGFOG00000001493
Flycatcher	MODERN SPECIES		TOMM70 (ENSFALG00000005904)	ENSFALG00000005929	TMEM45A (ENSFALG00000026916)	TFG (ENSFALG00000005945)	ABI3BP (ENSFALG00000005969)	IMPG2 (ENSFALG00000006484)	SENP7 (ENSFALG00000006491)	ENSFALG00000027030	TXNL4B (ENSFALG00000024861)	TRMT10C (ENSFALG00000014236)	ENSFALG00000025509	PCNP (ENSFALG00000006521)	ZBTB11 (ENSFALG00000006526)	RPL24 (ENSFALG00000028503)	CEP97 (ENSFALG00000028969)	NXPE3 (ENSFALG00000024767) ##22	NFKBIZ (ENSFALG00000006542)	ZPLD1 (ENSFALG00000006546)	ENSFALG00000023496	ALCAM (ENSFALG00000006553)	ENSFALG00000006567	ENSFALG00000026824	BBX (ENSFALG00000006478)	CD47 (ENSFALG00000006475)	IFT57 (ENSFALG00000006474)	HHLA2 (ENSFALG00000006473)	ENSFALG00000006405	CIP2A (ENSFALG00000006371)	ENSFALG00000006367	TRAT1 (ENSFALG00000006365)	ENSFALG00000006362
Great tit	MODERN SPECIES		NIT2 (ENSPMJG00000011161)	TOMM70 (ENSPMJG00000011162)	LNP1 (ENSPMJG00000011163)	TMEM45A (ENSPMJG00000011164)	TFG (ENSPMJG00000011166)	ABI3BP (ENSPMJG00000011168)	IMPG2 (ENSPMJG00000011169)	SENP7 (ENSPMJG00000011170)	ENSPMJG00000011171	TXNL4B (ENSPMJG00000011172)	TRMT10C (ENSPMJG00000011174)	PCNP (ENSPMJG00000011176)	ZBTB11 (ENSPMJG00000011177)	RPL24 (ENSPMJG00000011178)	CEP97 (ENSPMJG00000011179)	NXPE3 (ENSPMJG00000011180) ##22	NFKBIZ (ENSPMJG00000011182)	ZPLD1 (ENSPMJG00000011186)	ALCAM (ENSPMJG00000011190)	CBLB (ENSPMJG00000011201)	BBX (ENSPMJG00000011213)	CD47 (ENSPMJG00000011224)	IFT57 (ENSPMJG00000011226)	ENSPMJG00000011227	ENSPMJG00000011229	CIP2A (ENSPMJG00000011910)	ENSPMJG00000011911	TRAT1 (ENSPMJG00000011913)	ENSPMJG00000011914	ENSPMJG00000011916	GUCA1C (ENSPMJG00000011917)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847	ENSGT01000000215044
Anatidae	ANCESTRAL SPECIES	6	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847	ENSGT01000000215044
Pink-footed goose	MODERN SPECIES	5	TOMM70 (ENSABRG00000008770)	LNP1 (ENSABRG00000008765)	TMEM45A (ENSABRG00000008752)	ADGRG7 (ENSABRG00000008699)	TFG (ENSABRG00000008677)	ABI3BP (ENSABRG00000008435)	IMPG2 (ENSABRG00000008265)	SENP7 (ENSABRG00000008233)	TXNL4B (ENSABRG00000008226)	ENSABRG00000008220	TRMT10C (ENSABRG00000008216)	PCNP (ENSABRG00000008207)	ZBTB11 (ENSABRG00000008108)	RPL24 (ENSABRG00000008041)	CEP97 (ENSABRG00000007953)	NXPE3 (ENSABRG00000007818) ##22	NFKBIZ (ENSABRG00000007558)	ENSABRG00000007544	ZPLD1 (ENSABRG00000007526)	ALCAM (ENSABRG00000007482)	CBLB (ENSABRG00000007436)	ENSABRG00000007431	BBX (ENSABRG00000007395)	IFT57 (ENSABRG00000007345)	HHLA2 (ENSABRG00000007332)	ENSABRG00000004959	CIP2A (ENSABRG00000004745)	ENSABRG00000004731	TRAT1 (ENSABRG00000004723)	ENSABRG00000004716	GUCA1C (ENSABRG00000004709)
Duck	MODERN SPECIES		ADGRG7 (ENSAPLG00000012118)	TFG (ENSAPLG00000012259)	ENSAPLG00000013913	IMPG2 (ENSAPLG00000013567)	SENP7 (ENSAPLG00000002660)	ENSAPLG00000011555	TXNL4B (ENSAPLG00000003001)	TRMT10C (ENSAPLG00000011561)	PCNP (ENSAPLG00000023880)	ENSAPLG00000024560	ENSAPLG00000003432	ENSAPLG00000027879	ENSAPLG00000028828	RPL24 (ENSAPLG00000003829)	CEP97 (ENSAPLG00000004092)	NXPE3 (ENSAPLG00000004114) ##22	NFKBIZ (ENSAPLG00000004175)	ZPLD1 (ENSAPLG00000004513)	ALCAM (ENSAPLG00000012031)	CBLB (ENSAPLG00000011898)	BBX (ENSAPLG00000005336)	CD47 (ENSAPLG00000005590)	IFT57 (ENSAPLG00000005696)	ENSAPLG00000018561	ENSAPLG00000025582	NSUN3 (ENSAPLG00000011623)	ARL13B (ENSAPLG00000011691)	STX19 (ENSAPLG00000001617)	PROS1 (ENSAPLG00000011881)	EPHA3 (ENSAPLG00000012538)	ENSAPLG00000026876
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000171984	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847
Japanese quail	MODERN SPECIES		ENSCJPG00005017594	ADGRG7 (ENSCJPG00005017595)	ENSCJPG00005017596	TFG (ENSCJPG00005017597)	ENSCJPG00005017598	ENSCJPG00005017600	IMPG2 (ENSCJPG00005017601)	SENP7 (ENSCJPG00005017602)	ENSCJPG00005017606	TXNL4B (ENSCJPG00005017607)	TRMT10C (ENSCJPG00005017611)	PCNP (ENSCJPG00005017612)	ZBTB11 (ENSCJPG00005017613)	RPL24 (ENSCJPG00005017614)	CEP97 (ENSCJPG00005017615)	NXPE3 (ENSCJPG00005017616) ##22	NFKBIZ (ENSCJPG00005017617)	ZPLD1 (ENSCJPG00005017620)	ALCAM (ENSCJPG00005017632)	CBLB (ENSCJPG00005017633)	BBX (ENSCJPG00005017640)	ENSCJPG00005017641	IFT57 (ENSCJPG00005017642)	HHLA2 (ENSCJPG00005017643)	ENSCJPG00005017644	CIP2A (ENSCJPG00005017645)	ENSCJPG00005017646	TRAT1 (ENSCJPG00005017647)	ENSCJPG00005017648	GUCA1C (ENSCJPG00005017649)	ENSCJPG00005017651
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000171984	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847
Chicken	MODERN SPECIES		NIT2 (ENSGALG00010005630)	TOMM70 (ENSGALG00010005649)	LNP1 (ENSGALG00010005668)	TMEM45B (ENSGALG00010005679)	ADGRG7 (ENSGALG00010005698)	TFG (ENSGALG00010005769)	ABI3BP (ENSGALG00010005860)	IMPG2 (ENSGALG00010005888)	TXNL4B (ENSGALG00010005956)	ENSGALG00010006026	TRMT10C (ENSGALG00010006013)	PCNP (ENSGALG00010006039)	ZBTB11 (ENSGALG00010006047)	RPL24 (ENSGALG00010006061)	CEP97 (ENSGALG00010006073)	NXPE3 (ENSGALG00010006103) ##22	NFKBIZ (ENSGALG00010006156)	ZPLD1 (ENSGALG00010004577)	ALCAM (ENSGALG00010005150)	CBLB (ENSGALG00010005166)	BBX (ENSGALG00010004689)	CD47 (ENSGALG00010004736)	IFT57 (ENSGALG00010004762)	HHLA2 (ENSGALG00010004835)	MYH15 (ENSGALG00010004887)	KIAA1524 (ENSGALG00010004934)	ENSGALG00010006664	ENSGALG00010006678	SH2D1B (ENSGALG00010004946)	TRAT1 (ENSGALG00010004968)	HJURP (ENSGALG00010004988)
Turkey	MODERN SPECIES		TBC1D23 (ENSMGAG00000014362)	NIT2 (ENSMGAG00000014363)	TOMM70 (ENSMGAG00000014364)	LNP1 (ENSMGAG00000014365)	TMEM45A (ENSMGAG00000014367)	TFG (ENSMGAG00000014366)	ABI3BP (ENSMGAG00000014369)	IMPG2 (ENSMGAG00000014370)	SENP7 (ENSMGAG00000014372)	ENSMGAG00000016079	TRMT10C (ENSMGAG00000014375)	PCNP (ENSMGAG00000014377)	ZBTB11 (ENSMGAG00000017008)	RPL24 (ENSMGAG00000014373)	CEP97 (ENSMGAG00000014376)	NXPE3 (ENSMGAG00000014378) ##22	NFKBIZ (ENSMGAG00000014379)	ZPLD1 (ENSMGAG00000014380)	ALCAM (ENSMGAG00000014381)	CBLB (ENSMGAG00000014382)	BBX (ENSMGAG00000014384)	ENSMGAG00000014413	ENSMGAG00000014412	ENSMGAG00000016092	PROS1 (ENSMGAG00000014411)	ENSMGAG00000022246	ENSMGAG00000017996	ENSMGAG00000014415	ENSMGAG00000014407	ENSMGAG00000014408	CGGBP1 (ENSMGAG00000016084)
African ostrich	MODERN SPECIES	620	TOMM70 (ENSSCUG00000008046)	ENSSCUG00000008042	TMEM45A (ENSSCUG00000008040)	ADGRG7 (ENSSCUG00000008039)	TFG (ENSSCUG00000008038)	ABI3BP (ENSSCUG00000008017)	IMPG2 (ENSSCUG00000008007)	SENP7 (ENSSCUG00000008003)	ENSSCUG00000008000	TXNL4B (ENSSCUG00000007999)	TRMT10C (ENSSCUG00000007997)	PCNP (ENSSCUG00000007996)	ZBTB11 (ENSSCUG00000007992)	RPL24 (ENSSCUG00000007988)	CEP97 (ENSSCUG00000007986)	NXPE3 (ENSSCUG00000007984) ##22	NFKBIZ (ENSSCUG00000007980)	ZPLD1 (ENSSCUG00000007978)	ALCAM (ENSSCUG00000007968)	CBLB (ENSSCUG00000007962)	BBX (ENSSCUG00000007942)	CD47 (ENSSCUG00000007936)	IFT57 (ENSSCUG00000007933)	HHLA2 (ENSSCUG00000010270)	ENSSCUG00000010268	CIP2A (ENSSCUG00000010266)	ENSSCUG00000010265	TRAT1 (ENSSCUG00000010264)	ENSSCUG00000010263	GUCA1C (ENSSCUG00000010262)	ENSSCUG00000010259
Australian saltwater crocodile	MODERN SPECIES	27	ENSCPRG00005010943	ENSCPRG00005010925	NSUN3 (ENSCPRG00005010913)	STX19 (ENSCPRG00005010912)	ARL13B (ENSCPRG00005010899)	TFG (ENSCPRG00005010891)	IMPG2 (ENSCPRG00005010862)	SENP7 (ENSCPRG00005010849)	ENSCPRG00005010839	TXNL4B (ENSCPRG00005010837)	TRMT10C (ENSCPRG00005010835)	PCNP (ENSCPRG00005010834)	ZBTB11 (ENSCPRG00005010830)	RPL24 (ENSCPRG00005010827)	CEP97 (ENSCPRG00005010823)	NXPE3 (ENSCPRG00005010817) ##22	NFKBIZ (ENSCPRG00005010808)	ZPLD1 (ENSCPRG00005010789)	ALCAM (ENSCPRG00005010758)	CBLB (ENSCPRG00005010605)	ENSCPRG00005010503	BBX (ENSCPRG00005010427)	ENSCPRG00005010377	CD47 (ENSCPRG00005010360)	IFT57 (ENSCPRG00005010353)	HHLA2 (ENSCPRG00005010328)	ENSCPRG00005010192	CIP2A (ENSCPRG00005010087)	ENSCPRG00005010074	TRAT1 (ENSCPRG00005010033)	ENSCPRG00005010027
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441	ENSGT00940000162847
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441	ENSGT00940000162847
Emydidae	ANCESTRAL SPECIES	36	ENSGT00940000157095	ENSGT01050000245137	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00950000183010.a.b.a.b.b.a.a.a	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000171984	ENSGT00390000004910	ENSGT00390000005575	ENSGT00960000189441
painted turtle	MODERN SPECIES		NIT2 (ENSCPBG00000003972)	TOMM70 (ENSCPBG00000003983)	ENSCPBG00000003998	TMEM45A (ENSCPBG00000004005)	ADGRG7 (ENSCPBG00000004017)	TFG (ENSCPBG00000004037)	ABI3BP (ENSCPBG00000004109)	IMPG2 (ENSCPBG00000004294)	SENP7 (ENSCPBG00000004364)	ENSCPBG00000004402	TXNL4B (ENSCPBG00000004410)	PCNP (ENSCPBG00000004421)	ZBTB11 (ENSCPBG00000004441)	RPL24 (ENSCPBG00000004458)	CEP97 (ENSCPBG00000004478)	NXPE3 (ENSCPBG00000004491) ##22	NFKBIZ (ENSCPBG00000004507)	ENSCPBG00000004515	ZPLD1 (ENSCPBG00000004529)	ALCAM (ENSCPBG00000004575)	CBLB (ENSCPBG00000004619)	BBX (ENSCPBG00000004643)	ENSCPBG00000004657	CD47 (ENSCPBG00000004681)	IFT57 (ENSCPBG00000004696)	HHLA2 (ENSCPBG00000004703)	ENSCPBG00000004865	CIP2A (ENSCPBG00000005195)	ENSCPBG00000005288	ENSCPBG00000005293	TRAT1 (ENSCPBG00000005299)
Three-toed box turtle	MODERN SPECIES	272	TBC1D23 (ENSTMTG00000017803)	NIT2 (ENSTMTG00000017864)	TOMM70 (ENSTMTG00000017918)	ENSTMTG00000018173	TMEM45A (ENSTMTG00000018184)	TFG (ENSTMTG00000018199)	IMPG2 (ENSTMTG00000018267)	SENP7 (ENSTMTG00000018310)	ENSTMTG00000018385	TXNL4B (ENSTMTG00000018389)	TRMT10C (ENSTMTG00000018396)	PCNP (ENSTMTG00000018404)	ZBTB11 (ENSTMTG00000018433)	RPL24 (ENSTMTG00000018458)	CEP97 (ENSTMTG00000018479)	NXPE3 (ENSTMTG00000018581) ##22	NFKBIZ (ENSTMTG00000018686)	ENSTMTG00000018709	ZPLD1 (ENSTMTG00000018724)	ALCAM (ENSTMTG00000018764)	CBLB (ENSTMTG00000018863)	BBX (ENSTMTG00000019277)	ENSTMTG00000019325	ENSTMTG00000019336	CD47 (ENSTMTG00000019348)	IFT57 (ENSTMTG00000019378)	HHLA2 (ENSTMTG00000019397)	ENSTMTG00000019465	CIP2A (ENSTMTG00000019686)	ENSTMTG00000019733	ENSTMTG00000019745
Testudinidae	ANCESTRAL SPECIES		ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B.m	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00390000005575	ENSGT00940000162847	ENSGT00390000003446
Abingdon island giant tortoise	MODERN SPECIES	2285							IMPG2 (ENSCABG00000003899)	SENP7 (ENSCABG00000003925)	ENSCABG00000003944	TXNL4B (ENSCABG00000003946)	TRMT10C (ENSCABG00000003948)	PCNP (ENSCABG00000003951)	ZBTB11 (ENSCABG00000003955)	RPL24 (ENSCABG00000003959)	CEP97 (ENSCABG00000003963)	NXPE3 (ENSCABG00000003978) ##22	NFKBIZ (ENSCABG00000004067)	ENSCABG00000004075	ZPLD1 (ENSCABG00000004077)
Chinese turtle	MODERN SPECIES	609																NXPE3 (ENSPSIG00000015256) ##22	NFKBIZ (ENSPSIG00000015425)	ZPLD1 (ENSPSIG00000015430)	ALCAM (ENSPSIG00000015483)	ENSPSIG00000001363	CBLB (ENSPSIG00000015530)	BBX (ENSPSIG00000015872)	CD47 (ENSPSIG00000015881)	ENSPSIG00000016253	IFT57 (ENSPSIG00000016273)	HHLA2 (ENSPSIG00000016326)	ENSPSIG00000016330	CIP2A (ENSPSIG00000016895)	ENSPSIG00000016898	ENSPSIG00000016902	GUCA1C (ENSPSIG00000016921)
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00970000194160	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00390000004910	ENSGT00960000189776	ENSGT00940000162847
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A.g	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00940000155920	ENSGT00390000004910	ENSGT00960000189776	ENSGT00940000162847	ENSGT00940000156028
Laterata	ANCESTRAL SPECIES	3	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A.g	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160950	ENSGT00390000013764	ENSGT00940000156358	ENSGT00950000182982.B	ENSGT00390000013867	ENSGT00950000183202.a.a	ENSGT00940000158986	ENSGT00700000104550.a
Common wall lizard	MODERN SPECIES	12	LNP1 (ENSPMRG00000008354)	TMEM45A (ENSPMRG00000008363)	TFG (ENSPMRG00000008374)	ENSPMRG00000008416	ENSPMRG00000008482	ENSPMRG00000008485	IMPG2 (ENSPMRG00000008494)	SENP7 (ENSPMRG00000008516)	ENSPMRG00000008544	TXNL4B (ENSPMRG00000008550)	TRMT10C (ENSPMRG00000008554)	ENSPMRG00000008558	ZBTB11 (ENSPMRG00000008569)	RPL24 (ENSPMRG00000008586)	CEP97 (ENSPMRG00000008599)	NXPE3 (ENSPMRG00000008607) ##22	NFKBIZ (ENSPMRG00000008621)	ZPLD1 (ENSPMRG00000008630)	ENSPMRG00000008638	ALCAM (ENSPMRG00000008649)	ENSPMRG00000008681	BBX (ENSPMRG00000008691)	CD47 (ENSPMRG00000008715)	ENSPMRG00000008733	IFT57 (ENSPMRG00000008742)	ENSPMRG00000008771	CIP2A (ENSPMRG00000008876)	ENSPMRG00000008988	TRAT1 (ENSPMRG00000008991)	ENSPMRG00000008998	GUCA1C (ENSPMRG00000009005)
Argentine black and white tegu	MODERN SPECIES		TBC1D23 (ENSSMRG00000004868)	NIT2 (ENSSMRG00000004847)	TOMM70 (ENSSMRG00000004825)	LNP1 (ENSSMRG00000004811)	TMEM45A (ENSSMRG00000004803)	ENSSMRG00000004712	IMPG2 (ENSSMRG00000004644)	SENP7 (ENSSMRG00000004605)	ENSSMRG00000004585	TXNL4B (ENSSMRG00000004584)	TRMT10C (ENSSMRG00000004583)	PCNP (ENSSMRG00000004582)	ZBTB11 (ENSSMRG00000004575)	RPL24 (ENSSMRG00000004572)	CEP97 (ENSSMRG00000004568)	NXPE3 (ENSSMRG00000004562) ##22	NFKBIZ (ENSSMRG00000004546)	ZPLD1 (ENSSMRG00000004485)	ENSSMRG00000004398	ALCAM (ENSSMRG00000004263)	CBLB (ENSSMRG00000003637)	ENSSMRG00000003630	BBX (ENSSMRG00000003604)	CD47 (ENSSMRG00000003577)	IFT57 (ENSSMRG00000003564)	ENSSMRG00000003543	CIP2A (ENSSMRG00000003526)	ENSSMRG00000003408	ENSSMRG00000003397	GUCA1C (ENSSMRG00000003368)	NECTIN3 (ENSSMRG00000003311)
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A.h	ENSGT00530000063558.A.g	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00960000189776	ENSGT00940000162847	ENSGT00940000156028	ENSGT00390000003446	ENSGT00940000162182
Elapidae	ANCESTRAL SPECIES	10	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00990000213008	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00960000189776	ENSGT00940000162847	ENSGT00940000156028	ENSGT00960000189437
Elapidae_a	ANCESTRAL SPECIES	12	ENSGT00950000182852.A.a.b	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00990000213008	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307.a	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00960000189776	ENSGT00940000162847	ENSGT00940000156028	ENSGT00960000189437
Acanthophiinae	ANCESTRAL SPECIES	14	ENSGT00950000182852.A.a.b	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00990000213008	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307.a	ENSGT00940000160950	ENSGT00940000153251.a	ENSGT00940000156202.b	ENSGT00960000189776	ENSGT00940000162847	ENSGT00940000156028	ENSGT00960000189437
Mainland tiger snake	MODERN SPECIES	7							IMPG2 (ENSNSUG00000015921)	SENP7 (ENSNSUG00000015922)	ENSNSUG00000015924	TXNL4B (ENSNSUG00000015925)	TRMT10C (ENSNSUG00000015926)	PCNP (ENSNSUG00000015927)	ZBTB11 (ENSNSUG00000015928)	RPL24 (ENSNSUG00000015929)	CEP97 (ENSNSUG00000015930)	NXPE3 (ENSNSUG00000015931) ##22	NFKBIZ (ENSNSUG00000015932)	ZPLD1 (ENSNSUG00000015933)	ENSNSUG00000015935	ALCAM (ENSNSUG00000015936)	CBLB (ENSNSUG00000015937)	BBX (ENSNSUG00000015947)	ENSNSUG00000015949	IFT57 (ENSNSUG00000015950)	ENSNSUG00000015954	CIP2A (ENSNSUG00000015955)	ENSNSUG00000015956	ENSNSUG00000015957	GUCA1C (ENSNSUG00000015958)	NECTIN3 (ENSNSUG00000015961)	PLCXD2 (ENSNSUG00000015963)
Eastern brown snake	MODERN SPECIES	14	CMSS1 (ENSPTXG00000004882)	TBC1D23 (ENSPTXG00000004876)	NIT2 (ENSPTXG00000004872)	TOMM70 (ENSPTXG00000004870)	TMEM45A (ENSPTXG00000004816)	TFG (ENSPTXG00000004815)	IMPG2 (ENSPTXG00000004814)	SENP7 (ENSPTXG00000004812)	ENSPTXG00000004811	TXNL4B (ENSPTXG00000004809)	TRMT10C (ENSPTXG00000004806)	PCNP (ENSPTXG00000004805)	ZBTB11 (ENSPTXG00000004803)	RPL24 (ENSPTXG00000004801)	CEP97 (ENSPTXG00000004797)	NXPE3 (ENSPTXG00000004768) ##22	NFKBIZ (ENSPTXG00000004767)	ZPLD1 (ENSPTXG00000004766)	ENSPTXG00000004765	ALCAM (ENSPTXG00000004764)	CBLB (ENSPTXG00000004759)	BBX (ENSPTXG00000004756)	CD47 (ENSPTXG00000004752)	IFT57 (ENSPTXG00000004748)	ENSPTXG00000004747	CIP2A (ENSPTXG00000004675)	ENSPTXG00000004671	ENSPTXG00000004670	ENSPTXG00000004668	GUCA1C (ENSPTXG00000004667)	NECTIN3 (ENSPTXG00000004666)
Blue-lipped sea krait	MODERN SPECIES	8011																NXPE3 (ENSLLTG00000012102) ##22
Indian cobra	MODERN SPECIES	4	ENSNNAG00000010080	NIT2 (ENSNNAG00000010059)	TOMM70 (ENSNNAG00000009049)	TMEM45A (ENSNNAG00000008785)	TFG (ENSNNAG00000008759)	IMPG2 (ENSNNAG00000008697)	SENP7 (ENSNNAG00000008641)	ENSNNAG00000008585	ENSNNAG00000008570	TXNL4B (ENSNNAG00000008557)	TRMT10C (ENSNNAG00000008546)	PCNP (ENSNNAG00000008520)	ZBTB11 (ENSNNAG00000008393)	RPL24 (ENSNNAG00000008373)	CEP97 (ENSNNAG00000008315)	NXPE3 (ENSNNAG00000008170) ##22	NFKBIZ (ENSNNAG00000008130)	ZPLD1 (ENSNNAG00000008070)	ENSNNAG00000008037	ALCAM (ENSNNAG00000007907)	CBLB (ENSNNAG00000007743)	BBX (ENSNNAG00000007646)	ENSNNAG00000007616	IFT57 (ENSNNAG00000007561)	ENSNNAG00000007156	CIP2A (ENSNNAG00000007016)	ENSNNAG00000006948	GUCA1C (ENSNNAG00000006884)	ENSNNAG00000006859	PLCXD2 (ENSNNAG00000006830)	ENSNNAG00000006807
Lizard	MODERN SPECIES	2	NIT2 (ENSACAG00000011321)	TOMM70 (ENSACAG00000011389)	LNP1 (ENSACAG00000011523)	TMEM45A (ENSACAG00000011528)	TFG (ENSACAG00000011584)	ENSACAG00000040174	ENSACAG00000034638	IMPG2 (ENSACAG00000011797)	ENSACAG00000040678	SENP7 (ENSACAG00000011843)	TRMT10C (ENSACAG00000011903)	PCNP (ENSACAG00000011907)	ZBTB11 (ENSACAG00000011934)	RPL24 (ENSACAG00000012029)	CEP97 (ENSACAG00000012031)	NXPE3 (ENSACAG00000012080) ##22	NFKBIZ (ENSACAG00000012098)	ENSACAG00000038017	ZPLD1 (ENSACAG00000012168)	ENSACAG00000025644	ENSACAG00000040231	ENSACAG00000022859	ENSACAG00000043590	ENSACAG00000036570	ALCAM (ENSACAG00000006325)	ENSACAG00000044702	ENSACAG00000028979	CBLB (ENSACAG00000006453)	ENSACAG00000044152	ENSACAG00000045171	ENSACAG00000045429
tuatara	MODERN SPECIES	699							IMPG2 (ENSSPUG00000018646)	SENP7 (ENSSPUG00000018566)	ENSSPUG00000018509	TXNL4B (ENSSPUG00000018503)	TRMT10C (ENSSPUG00000018495)	PCNP (ENSSPUG00000018491)	ZBTB11 (ENSSPUG00000018482)	RPL24 (ENSSPUG00000018475)	CEP97 (ENSSPUG00000018450)	NXPE3 (ENSSPUG00000018418) ##22	NFKBIZ (ENSSPUG00000018407)	ENSSPUG00000018402	ZPLD1 (ENSSPUG00000018398)
Mammalia	ANCESTRAL SPECIES		ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a	ENSGT01000000215044	ENSGT00940000156028
Theria	ANCESTRAL SPECIES	1	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00530000063965.a.a.b	ENSGT00940000156527	ENSGT00940000153064.b.a	ENSGT01050000244818.d.b.b	ENSGT00940000153064.b.b.a.a.a.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00530000063965.a.a.b	ENSGT00940000156527	ENSGT00940000153064.b.a	ENSGT01050000244818.d.b.b	ENSGT00940000153064.b.b.a.a.a.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692
Diprotodontia	ANCESTRAL SPECIES	23	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00530000063965.a.a.b	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Diprotodontia_a	ANCESTRAL SPECIES	24	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00530000063965.a.a.b	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
koala	MODERN SPECIES	79	NIT2 (ENSPCIG00000015675)	TOMM70 (ENSPCIG00000015677)	ENSPCIG00000000184	TMEM45A (ENSPCIG00000000072)	ADGRG7 (ENSPCIG00000016454)	TFG (ENSPCIG00000016452)	ENSPCIG00000016097	IMPG2 (ENSPCIG00000016094)	SENP7 (ENSPCIG00000016085)	ENSPCIG00000033217	TRMT10C (ENSPCIG00000016080)	ENSPCIG00000016079	ZBTB11 (ENSPCIG00000016077)	ENSPCIG00000016075	CEP97 (ENSPCIG00000016068)	NXPE3 (ENSPCIG00000016065) ##22	NFKBIZ (ENSPCIG00000016061)	ENSPCIG00000022353	ZPLD1 (ENSPCIG00000022345)	ENSPCIG00000022341	ENSPCIG00000016946	ENSPCIG00000022513	ALCAM (ENSPCIG00000022503)	CBLB (ENSPCIG00000022439)	BBX (ENSPCIG00000011827)	CD47 (ENSPCIG00000011834)	IFT57 (ENSPCIG00000011835)	ENSPCIG00000011836	ENSPCIG00000036398	ENSPCIG00000012031	ENSPCIG00000033096
Common wonbat	MODERN SPECIES	56	NIT2 (ENSVURG00010012148)	TOMM70 (ENSVURG00010012184)	ENSVURG00010012941	TMEM45A (ENSVURG00010012942)	ADGRG7 (ENSVURG00010012960)	TFG (ENSVURG00010012983)	ENSVURG00010013009	IMPG2 (ENSVURG00010013164)	SENP7 (ENSVURG00010013236)	ENSVURG00010013303	TRMT10C (ENSVURG00010013308)	PCNP (ENSVURG00010013310)	ZBTB11 (ENSVURG00010013318)	ENSVURG00010013413	CEP97 (ENSVURG00010013424)	NXPE3 (ENSVURG00010013436) ##22	NFKBIZ (ENSVURG00010013444)	ENSVURG00010013453	ZPLD1 (ENSVURG00010013461)	ENSVURG00010013495	ENSVURG00010013506	ENSVURG00010013508	ENSVURG00010013535	ENSVURG00010013576	BBX (ENSVURG00010013747)	CD47 (ENSVURG00010013769)	IFT57 (ENSVURG00010013783)	ENSVURG00010013790	CIP2A (ENSVURG00010013797)	ENSVURG00010013809	ENSVURG00010013844
Wallaby	MODERN SPECIES	5226																ENSMEUG00000005432 ##22
Tasmanian devil	MODERN SPECIES	2	TMEM45A (ENSSHAG00000004347)	ENSSHAG00000031464	ENSSHAG00000032206	ENSSHAG00000030040	ENSSHAG00000000641	TFG (ENSSHAG00000013503)	ENSSHAG00000012159	IMPG2 (ENSSHAG00000010307)	SENP7 (ENSSHAG00000009383)	ENSSHAG00000009070	TRMT10C (ENSSHAG00000008854)	PCNP (ENSSHAG00000008713)	ZBTB11 (ENSSHAG00000008340)	ENSSHAG00000030862	CEP97 (ENSSHAG00000021301)	NXPE3 (ENSSHAG00000023495) ##22	NFKBIZ (ENSSHAG00000006414)	ENSSHAG00000029239	ZPLD1 (ENSSHAG00000009390)	ENSSHAG00000022345	ENSSHAG00000022501	ALCAM (ENSSHAG00000014892)	CBLB (ENSSHAG00000013934)	ENSSHAG00000024641	ENSSHAG00000010123	BBX (ENSSHAG00000003009)	CD47 (ENSSHAG00000012318)	IFT57 (ENSSHAG00000012976)	ENSSHAG00000014283	ENSSHAG00000022158	CIP2A (ENSSHAG00000015364)
Opossum	MODERN SPECIES	3	NIT2 (ENSMODG00000002171)	TOMM70 (ENSMODG00000002158)	ENSMODG00000028846	TMEM45A (ENSMODG00000025555)	ENSMODG00000002093	TFG (ENSMODG00000002082)	ENSMODG00000002010	IMPG2 (ENSMODG00000001983)	ENSMODG00000037791	SENP7 (ENSMODG00000001964)	ENSMODG00000001947	PCNP (ENSMODG00000001943)	ZBTB11 (ENSMODG00000001927)	RPL24 (ENSMODG00000001916)	CEP97 (ENSMODG00000001903)	NXPE3 (ENSMODG00000001891) ##22	NFKBIZ (ENSMODG00000001888)	ENSMODG00000025182	ZPLD1 (ENSMODG00000001877)	ENSMODG00000042278	ENSMODG00000037530	ENSMODG00000039570	ENSMODG00000043822	ALCAM (ENSMODG00000001829)	ENSMODG00000043098	CBLB (ENSMODG00000001816)	ENSMODG00000041564	CCDC54 (ENSMODG00000025189)	BBX (ENSMODG00000001748)	ENSMODG00000028099	ENSMODG00000009055
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Atlantogenata	ANCESTRAL SPECIES	91	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000153998.a
Afrotheria	ANCESTRAL SPECIES	114	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000004910	ENSGT00940000153998.a	ENSGT00390000004871.b
Afrotheria_a	ANCESTRAL SPECIES	124	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692.a
Hyrax	MODERN SPECIES	5253																NXPE3 (ENSPCAG00000002053) ##22
Elephant	MODERN SPECIES	509	NIT2 (ENSLAFG00000006333)	TOMM70 (ENSLAFG00000006338)	TMEM45A (ENSLAFG00000008221)	ADGRG7 (ENSLAFG00000012481)	TFG (ENSLAFG00000025545)	ENSLAFG00000029427	ENSLAFG00000011981	IMPG2 (ENSLAFG00000030629)	SENP7 (ENSLAFG00000005511)	ENSLAFG00000012162	TRMT10C (ENSLAFG00000009677)	PCNP (ENSLAFG00000005518)	ENSLAFG00000005523	RPL24 (ENSLAFG00000013804)	CEP97 (ENSLAFG00000015540)	NXPE3 (ENSLAFG00000001886) ##22	NFKBIZ (ENSLAFG00000001888)	ZPLD1 (ENSLAFG00000016983)	ENSLAFG00000031921	ALCAM (ENSLAFG00000014441)	CBLB (ENSLAFG00000014448)	CCDC54 (ENSLAFG00000022124)	BBX (ENSLAFG00000006362)	CD47 (ENSLAFG00000014098)	IFT57 (ENSLAFG00000005206)	HHLA2 (ENSLAFG00000016327)	ENSLAFG00000021424	CIP2A (ENSLAFG00000010269)	ENSLAFG00000010272
Tenrec	MODERN SPECIES	4029																NXPE3 (ENSETEG00000014112) ##22
Xenarthra	ANCESTRAL SPECIES	1397																ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1246														ZNF214 (ENSDNOG00000042378)	ENSDNOG00000043954	ENSDNOG00000035255 ##22	ENSDNOG00000011946	SYT9 (ENSDNOG00000017119)	OLFML1 (ENSDNOG00000038995)	PPFIBP2 (ENSDNOG00000000830)	OVCH2 (ENSDNOG00000000836)	ENSDNOG00000042878	ENSDNOG00000040097	ENSDNOG00000025417	ENSDNOG00000049532
Armadillo	MODERN SPECIES	928															DLC1 (ENSDNOG00000007161)	ENSDNOG00000035130 ##22	C8orf48 (ENSDNOG00000017630)	ENSDNOG00000036332	ENSDNOG00000032569	ENSDNOG00000036888
Armadillo	MODERN SPECIES	2442																ENSDNOG00000031762 ##22	NFKBIZ (ENSDNOG00000012771)	ZPLD1 (ENSDNOG00000011469)	ENSDNOG00000031683
Sloth	MODERN SPECIES	3685																NXPE3 (ENSCHOG00000009808) ##22
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Cetacea	ANCESTRAL SPECIES	10	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156816.j	ENSGT00940000156527	ENSGT01030000236483	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156816.j	ENSGT00940000156527	ENSGT00390000018418.c.b	ENSGT01030000236483	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.b	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156816.j	ENSGT00940000156527	ENSGT00390000018418.c.b	ENSGT01030000236483	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000013132.v.b	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156816.j	ENSGT00940000156527	ENSGT00390000018418.c.b	ENSGT01030000236483	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00520000055616.a.m.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00940000155106.u.b	ENSGT00390000013132.v.b	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156816.j	ENSGT00940000156527	ENSGT01030000239477	ENSGT00390000018418.c.b	ENSGT01030000236483	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00520000055616.a.m.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00940000155106.u.b	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944
Beluga whale	MODERN SPECIES	111	TOMM70 (ENSDLEG00000012606)	ENSDLEG00000012633	ENSDLEG00000008131	TMEM45A (ENSDLEG00000008173)	TFG (ENSDLEG00000008302)	ENSDLEG00000008338	ENSDLEG00000008401	IMPG2 (ENSDLEG00000008451)	SENP7 (ENSDLEG00000008519)	ENSDLEG00000008598	TRMT10C (ENSDLEG00000008607)	ENSDLEG00000008618	ZBTB11 (ENSDLEG00000008646)	RPL24 (ENSDLEG00000008702)	CEP97 (ENSDLEG00000008723)	NXPE3 (ENSDLEG00000008745) ##22	NFKBIZ (ENSDLEG00000008770)	ENSDLEG00000008814	ZPLD1 (ENSDLEG00000008857)	ENSDLEG00000008911	ENSDLEG00000008936	ENSDLEG00000008955	ALCAM (ENSDLEG00000009006)	CBLB (ENSDLEG00000009109)	ENSDLEG00000009169	ENSDLEG00000009178	BBX (ENSDLEG00000009213)	ENSDLEG00000009327	CD47 (ENSDLEG00000009365)	IFT57 (ENSDLEG00000009439)	ENSDLEG00000009477
Narwhal	MODERN SPECIES	297	TBC1D23 (ENSMMNG00015004647)	NIT2 (ENSMMNG00015004684)	TOMM70 (ENSMMNG00015004700)	LNP1 (ENSMMNG00015004710)	TMEM45A (ENSMMNG00015004718)	TFG (ENSMMNG00015004732)	ABI3BP (ENSMMNG00015004794)	IMPG2 (ENSMMNG00015004816)	SENP7 (ENSMMNG00015004860)	ENSMMNG00015004946	TRMT10C (ENSMMNG00015004951)	ENSMMNG00015004956	ZBTB11 (ENSMMNG00015004965)	ENSMMNG00015004979	CEP97 (ENSMMNG00015004996)	NXPE3 (ENSMMNG00015005010) ##22	NFKBIZ (ENSMMNG00015005030)	ENSMMNG00015005048	ZPLD1 (ENSMMNG00015005061)	ENSMMNG00015005084	NAA38 (ENSMMNG00015005089)	ENSMMNG00015005097	ALCAM (ENSMMNG00015005123)	CBLB (ENSMMNG00015005157)	ENSMMNG00015005182	ENSMMNG00015008835	ENSMMNG00015008841	CCDC54 (ENSMMNG00015008852)	BBX (ENSMMNG00015008874)	ENSMMNG00015008901	CD47 (ENSMMNG00015008921)
Vaquita	MODERN SPECIES	15	ENSPSNG00000003562	TBC1D23 (ENSPSNG00000003478)	NIT2 (ENSPSNG00000003424)	TOMM70 (ENSPSNG00000003376)	LNP1 (ENSPSNG00000003343)	TMEM45A (ENSPSNG00000003308)	TFG (ENSPSNG00000003278)	ABI3BP (ENSPSNG00000002763)	IMPG2 (ENSPSNG00000002397)	ENSPSNG00000002327	TRMT10C (ENSPSNG00000002316)	ENSPSNG00000002296	ZBTB11 (ENSPSNG00000002278)	RPL24 (ENSPSNG00000002246)	CEP97 (ENSPSNG00000002203)	NXPE3 (ENSPSNG00000002169) ##22	NFKBIZ (ENSPSNG00000002127)	ENSPSNG00000002074	ENSPSNG00000002058	ZPLD1 (ENSPSNG00000002026)	NAA38 (ENSPSNG00000002007)	ENSPSNG00000001994	ALCAM (ENSPSNG00000001949)	CBLB (ENSPSNG00000001892)	ENSPSNG00000001845	ENSPSNG00000001832	BBX (ENSPSNG00000001750)	ENSPSNG00000001712	ENSPSNG00000001699	CD47 (ENSPSNG00000001669)	IFT57 (ENSPSNG00000001641)
Dolphin	MODERN SPECIES	833																NXPE3 (ENSTTRG00000006357) ##22	NFKBIZ (ENSTTRG00000006369)
Sperm whale	MODERN SPECIES		TOMM70 (ENSPCTG00005013546)	LNP1 (ENSPCTG00005013469)	TMEM45A (ENSPCTG00005013388)	ENSPCTG00005013369	ADGRG7 (ENSPCTG00005012996)	ENSPCTG00005012909	ABI3BP (ENSPCTG00005010677)	IMPG2 (ENSPCTG00005010313)	SENP7 (ENSPCTG00005009110)	ENSPCTG00005009020	TRMT10C (ENSPCTG00005009000)	PCNP (ENSPCTG00005008962)	ZBTB11 (ENSPCTG00005008879)	RPL24 (ENSPCTG00005008789)	CEP97 (ENSPCTG00005008700)	NXPE3 (ENSPCTG00005008615) ##22	NFKBIZ (ENSPCTG00005008515)	ENSPCTG00005008414	ZPLD1 (ENSPCTG00005003408)	ENSPCTG00005003399	ENSPCTG00005003390	ENSPCTG00005003374	ENSPCTG00005003368	ENSPCTG00005003349	ALCAM (ENSPCTG00005003308)	CBLB (ENSPCTG00005003226)	ENSPCTG00005003200	ENSPCTG00005003197	BBX (ENSPCTG00005003174)	CD47 (ENSPCTG00005003150)	IFT57 (ENSPCTG00005003123)
Blue whale	MODERN SPECIES	15	TBC1D23 (ENSBMSG00010012780)	NIT2 (ENSBMSG00010012746)	TOMM70 (ENSBMSG00010012722)	LNP1 (ENSBMSG00010012698)	TMEM45A (ENSBMSG00010012681)	ADGRG7 (ENSBMSG00010012630)	TFG (ENSBMSG00010012586)	ABI3BP (ENSBMSG00010012526)	IMPG2 (ENSBMSG00010012464)	SENP7 (ENSBMSG00010012031)	ENSBMSG00010011947	ENSBMSG00010011916	ZBTB11 (ENSBMSG00010011902)	RPL24 (ENSBMSG00010011876)	CEP97 (ENSBMSG00010011837)	NXPE3 (ENSBMSG00010011824) ##22	NFKBIZ (ENSBMSG00010011718)	ENSBMSG00010011693	ZPLD1 (ENSBMSG00010011659)	ENSBMSG00010011644	ENSBMSG00010011627	ALCAM (ENSBMSG00010011572)	CBLB (ENSBMSG00010011539)	ENSBMSG00010011516	ENSBMSG00010011496	CCDC54 (ENSBMSG00010002704)	BBX (ENSBMSG00010002648)	ENSBMSG00010002621	CD47 (ENSBMSG00010002592)	IFT57 (ENSBMSG00010002550)	CIP2A (ENSBMSG00010002451)
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT01010000229174	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533	ENSGT00390000004910
Percora_a	ANCESTRAL SPECIES	7	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT01010000229174	ENSGT00390000004856.w.a.a.b.a	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533
Bovidae	ANCESTRAL SPECIES	9	ENSGT00940000157095	ENSGT00390000007797.a	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT01010000229174	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533	ENSGT00390000004910
Bovinae	ANCESTRAL SPECIES	6	ENSGT00940000157095	ENSGT00390000007797.a	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00910000144152.b.b.b	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533	ENSGT00390000004910
Bos	ANCESTRAL SPECIES	7	ENSGT00940000157095	ENSGT00390000007797.a	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p.b.a	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00910000144152.b.b.b	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00940000162286.a.a.e.b.b.b.b.a.a.a.a.b.b	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000157095	ENSGT00390000007797.a	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p.b.a	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00910000144152.b.b.b	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00940000162286.a.a.e.b.b.b.b.a.a.a.a.b.b	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533
Domestic yak	MODERN SPECIES		TOMM70 (ENSBGRG00000002944)	ENSBGRG00000003008	ENSBGRG00000003043	ENSBGRG00000003081	ADGRG7 (ENSBGRG00000003100)	ENSBGRG00000003162	ABI3BP (ENSBGRG00000003226)	ENSBGRG00000003366	IMPG2 (ENSBGRG00000003382)	SENP7 (ENSBGRG00000003455)	TRMT10C (ENSBGRG00000003698)	PCNP (ENSBGRG00000003722)	ZBTB11 (ENSBGRG00000003762)	RPL24 (ENSBGRG00000003803)	CEP97 (ENSBGRG00000003937)	NXPE3 (ENSBGRG00000004124) ##22	ENSBGRG00000004168	NFKBIZ (ENSBGRG00000004210)	ZPLD1 (ENSBGRG00000004383)	ENSBGRG00000004445	ALCAM (ENSBGRG00000004469)	ENSBGRG00000004588	CBLB (ENSBGRG00000004626)	CCDC54 (ENSBGRG00000005046)	BBX (ENSBGRG00000005097)	ENSBGRG00000005417	ENSBGRG00000005428	CD47 (ENSBGRG00000005454)	ENSBGRG00000005662	IFT57 (ENSBGRG00000005675)	HHLA2 (ENSBGRG00000005737)
Wild yak	MODERN SPECIES	293	LNP1 (ENSBMUG00000009603)	ENSBMUG00000009614	ENSBMUG00000009618	ENSBMUG00000009633	ADGRG7 (ENSBMUG00000009656)	ENSBMUG00000009737	ABI3BP (ENSBMUG00000009873)	IMPG2 (ENSBMUG00000009911)	SENP7 (ENSBMUG00000010085)	ENSBMUG00000010303	TRMT10C (ENSBMUG00000010311)	PCNP (ENSBMUG00000010325)	ZBTB11 (ENSBMUG00000010346)	RPL24 (ENSBMUG00000010391)	CEP97 (ENSBMUG00000010424)	NXPE3 (ENSBMUG00000010441) ##22	NFKBIZ (ENSBMUG00000010460)
Bos_b	ANCESTRAL SPECIES	5	ENSGT00390000007797.a.b	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p.b.a	ENSGT00530000063558.A	ENSGT00390000008099.ob	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00910000144152.b.b.b	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00940000162286.a.a.e.b.b.b.b.a.a.a.a.b.b	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00960000187533
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005018453	ENSBIXG00005018416	ENSBIXG00005018386	ADGRG7 (ENSBIXG00005018347)	TFG (ENSBIXG00005018290)	ABI3BP (ENSBIXG00005018222)	ENSBIXG00005018090	IMPG2 (ENSBIXG00005005591)	SENP7 (ENSBIXG00005018029)	ENSBIXG00005017799	TRMT10C (ENSBIXG00005017786)	PCNP (ENSBIXG00005017762)	ZBTB11 (ENSBIXG00005017720)	RPL24 (ENSBIXG00005017677)	CEP97 (ENSBIXG00005017605)	NXPE3 (ENSBIXG00005017577) ##22	ENSBIXG00005017538	NFKBIZ (ENSBIXG00005017477)	ZPLD1 (ENSBIXG00005017388)	ENSBIXG00005007717	ALCAM (ENSBIXG00005017289)	CBLB (ENSBIXG00005002801)	ENSBIXG00005017147	ENSBIXG00005017129	ENSBIXG00005017092	ENSBIXG00005006756	ENSBIXG00005002772	CCDC54 (ENSBIXG00005017049)	BBX (ENSBIXG00005016980)	ENSBIXG00005002719	ENSBIXG00005016825
Cow	MODERN SPECIES		LNP1 (ENSBTAG00000034442)	ENSBTAG00000013321	TMEM45A (ENSBTAG00000004459)	ADGRG7 (ENSBTAG00000012140)	TFG (ENSBTAG00000016363)	ENSBTAG00000026836	ENSBTAG00000053387	IMPG2 (ENSBTAG00000015662)	SENP7 (ENSBTAG00000016932)	ENSBTAG00000018731	TRMT10C (ENSBTAG00000024027)	PCNP (ENSBTAG00000015069)	ZBTB11 (ENSBTAG00000013460)	RPL24 (ENSBTAG00000013461)	CEP97 (ENSBTAG00000013464)	NXPE3 (ENSBTAG00000013465) ##22	NFKBIZ (ENSBTAG00000010987)	ZPLD1 (ENSBTAG00000003666)	ALCAM (ENSBTAG00000000088)	CBLB (ENSBTAG00000013057)	CCDC54 (ENSBTAG00000046313)	BBX (ENSBTAG00000006893)	CD47 (ENSBTAG00000003585)	ENSBTAG00000049729	IFT57 (ENSBTAG00000005787)	HHLA2 (ENSBTAG00000018397)	MYH15 (ENSBTAG00000018399)	CIP2A (ENSBTAG00000017140)	DZIP3 (ENSBTAG00000006158)	ENSBTAG00000054027	TRAT1 (ENSBTAG00000049108)
American bison	MODERN SPECIES	3090	TOMM70 (ENSBBBG00000021250)	LNP1 (ENSBBBG00000021227)	ENSBBBG00000008944	ENSBBBG00000021216	ADGRG7 (ENSBBBG00000007190)	ENSBBBG00000021172	ABI3BP (ENSBBBG00000005658)	IMPG2 (ENSBBBG00000005651)	SENP7 (ENSBBBG00000020990)	ENSBBBG00000005570	TRMT10C (ENSBBBG00000020654)	PCNP (ENSBBBG00000020649)	ZBTB11 (ENSBBBG00000007677)	RPL24 (ENSBBBG00000020616)	CEP97 (ENSBBBG00000000509)	NXPE3 (ENSBBBG00000020561) ##22	ENSBBBG00000020543	NFKBIZ (ENSBBBG00000020528)
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000157095	ENSGT00390000007797.a	ENSGT00940000155530.h	ENSGT00940000155530.g	ENSGT00940000159169	ENSGT00510000047809.p	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d.f	ENSGT00530000063169.b.b	ENSGT00390000010218.f.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT01010000229174	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00950000182841.b.a.a.b.a.a.a.b.o	ENSGT00940000154451.l.b.b.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692
Goat	MODERN SPECIES		TOMM70 (ENSCHIG00000018620)	ENSCHIG00000016494	ENSCHIG00000002309	ENSCHIG00000022648	ADGRG7 (ENSCHIG00000016529)	ENSCHIG00000009847	ENSCHIG00000026704	IMPG2 (ENSCHIG00000010277)	SENP7 (ENSCHIG00000007729)	ENSCHIG00000002669	TRMT10C (ENSCHIG00000021446)	ENSCHIG00000008043	ZBTB11 (ENSCHIG00000025095)	ENSCHIG00000011680	CEP97 (ENSCHIG00000026482)	NXPE3 (ENSCHIG00000019375) ##22	NFKBIZ (ENSCHIG00000026427)	ENSCHIG00000015835	ZPLD1 (ENSCHIG00000006475)	ALCAM (ENSCHIG00000024020)	CBLB (ENSCHIG00000024426)	ENSCHIG00000026846	ENSCHIG00000011526	CCDC54 (ENSCHIG00000008376)	BBX (ENSCHIG00000022744)	CD47 (ENSCHIG00000022687)	IFT57 (ENSCHIG00000018255)	HHLA2 (ENSCHIG00000008374)	MYH15 (ENSCHIG00000021834)	CIP2A (ENSCHIG00000015414)	DZIP3 (ENSCHIG00000026879)
Siberian musk deer	MODERN SPECIES	21	TMEM45A (ENSMMSG00000003567)	ADGRG7 (ENSMMSG00000003498)	TFG (ENSMMSG00000003469)	ABI3BP (ENSMMSG00000003297)	ENSMMSG00000003268	ENSMMSG00000003246	IMPG2 (ENSMMSG00000003217)	SENP7 (ENSMMSG00000002791)	ENSMMSG00000002729	TRMT10C (ENSMMSG00000002724)	PCNP (ENSMMSG00000002707)	ZBTB11 (ENSMMSG00000002682)	RPL24 (ENSMMSG00000002654)	CEP97 (ENSMMSG00000002625)	ENSMMSG00000002610	NXPE3 (ENSMMSG00000002592) ##22	NFKBIZ (ENSMMSG00000002549)	ENSMMSG00000002526	ENSMMSG00000002507	ENSMMSG00000002489	ZPLD1 (ENSMMSG00000002438)	ENSMMSG00000002427	ENSMMSG00000002412
Yarkand deer	MODERN SPECIES	24	ENSCHYG00000017649	ENSCHYG00000017741	TMEM45A (ENSCHYG00000017813)	ENSCHYG00000018287	ADGRG7 (ENSCHYG00000018332)	TFG (ENSCHYG00000018584)	ABI3BP (ENSCHYG00000018759)	IMPG2 (ENSCHYG00000019938)	SENP7 (ENSCHYG00000020181)	ENSCHYG00000021749	TRMT10C (ENSCHYG00000021794)	PCNP (ENSCHYG00000021810)	ZBTB11 (ENSCHYG00000021857)	RPL24 (ENSCHYG00000021940)	CEP97 (ENSCHYG00000022058)	NXPE3 (ENSCHYG00000022155) ##22	ENSCHYG00000022229	NFKBIZ (ENSCHYG00000022396)	ENSCHYG00000022685	ZPLD1 (ENSCHYG00000022741)	ENSCHYG00000022874	ALCAM (ENSCHYG00000022904)	CBLB (ENSCHYG00000023071)	ENSCHYG00000023292	CCDC54 (ENSCHYG00000023308)	BBX (ENSCHYG00000023346)	CD47 (ENSCHYG00000023572)	ENSCHYG00000023704	ENSCHYG00000023746	HHLA2 (ENSCHYG00000023774)	ENSCHYG00000023837
Camelidae	ANCESTRAL SPECIES		ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00390000016329	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Alpaca	MODERN SPECIES	2306				TMEM45A (ENSVPAG00000012217)	ENSVPAG00000012221	TFG (ENSVPAG00000012224)	ENSVPAG00000012228	IMPG2 (ENSVPAG00000012231)	SENP7 (ENSVPAG00000012233)	ENSVPAG00000012237	PCNP (ENSVPAG00000012239)	ZBTB11 (ENSVPAG00000012242)	ENSVPAG00000012245	RPL24 (ENSVPAG00000012246)	CEP97 (ENSVPAG00000012247)	NXPE3 (ENSVPAG00000012249) ##22
Arabian camel	MODERN SPECIES		NIT2 (ENSCDRG00005002133)	TOMM70 (ENSCDRG00005002112)	LNP1 (ENSCDRG00005002105)	TMEM45A (ENSCDRG00005002081)	ADGRG7 (ENSCDRG00005002047)	TFG (ENSCDRG00005002012)	ABI3BP (ENSCDRG00005001958)	IMPG2 (ENSCDRG00005001913)	ENSCDRG00005001893	SENP7 (ENSCDRG00005001480)	TRMT10C (ENSCDRG00005001385)	ENSCDRG00005001371	ZBTB11 (ENSCDRG00005001346)	RPL24 (ENSCDRG00005001256)	CEP97 (ENSCDRG00005001223)	NXPE3 (ENSCDRG00005001200) ##22	NFKBIZ (ENSCDRG00005001162)	ZPLD1 (ENSCDRG00005001093)	ALCAM (ENSCDRG00005001017)	CBLB (ENSCDRG00005000856)	CCDC54 (ENSCDRG00005000817)	BBX (ENSCDRG00005000736)	CD47 (ENSCDRG00005000602)	IFT57 (ENSCDRG00005000559)	MYH15 (ENSCDRG00005000531)	CIP2A (ENSCDRG00005000477)	DZIP3 (ENSCDRG00005000402)	RETNLB (ENSCDRG00005000370)	TRAT1 (ENSCDRG00005000331)	MORC1 (ENSCDRG00005000297)	C3orf85 (ENSCDRG00005000251)
Suina	ANCESTRAL SPECIES	1	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00950000183224
Chacoan peccary	MODERN SPECIES	947	TOMM70 (ENSCWAG00000013793)	LNP1 (ENSCWAG00000013746)	TMEM45A (ENSCWAG00000013689)	ADGRG7 (ENSCWAG00000013391)	TFG (ENSCWAG00000013304)	ABI3BP (ENSCWAG00000012972)	IMPG2 (ENSCWAG00000012715)	SENP7 (ENSCWAG00000010581)	ENSCWAG00000010473	ENSCWAG00000010454	TRMT10C (ENSCWAG00000010439)	PCNP (ENSCWAG00000010404)	ZBTB11 (ENSCWAG00000010301)	RPL24 (ENSCWAG00000010191)	CEP97 (ENSCWAG00000020717)	NXPE3 (ENSCWAG00000020701) ##22	NFKBIZ (ENSCWAG00000020625)	ZPLD1 (ENSCWAG00000020587)	ALCAM (ENSCWAG00000020560)	CBLB (ENSCWAG00000020513)
Pig	MODERN SPECIES	4	TOMM70 (ENSSSCG00000011963)	LNP1 (ENSSSCG00000011964)	ENSSSCG00000040614	TMEM45A (ENSSSCG00000011965)	ADGRG7 (ENSSSCG00000011962)	TFG (ENSSSCG00000011961)	ABI3BP (ENSSSCG00000011959)	IMPG2 (ENSSSCG00000031273)	SENP7 (ENSSSCG00000021791)	ENSSSCG00000028677	TRMT10C (ENSSSCG00000011956)	PCNP (ENSSSCG00000036491)	ZBTB11 (ENSSSCG00000011953)	RPL24 (ENSSSCG00000011952)	CEP97 (ENSSSCG00000011949)	NXPE3 (ENSSSCG00000011950) ##22	NFKBIZ (ENSSSCG00000011951)	ZPLD1 (ENSSSCG00000011947)	ENSSSCG00000045423	ENSSSCG00000036856	ALCAM (ENSSSCG00000011946)	ENSSSCG00000031765	CBLB (ENSSSCG00000022486)	ENSSSCG00000052958	CCDC54 (ENSSSCG00000031231)	ENSSSCG00000011944	BBX (ENSSSCG00000011943)	CD47 (ENSSSCG00000011942)	IFT57 (ENSSSCG00000011941)	HHLA2 (ENSSSCG00000027275)	MYH15 (ENSSSCG00000022175)
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Caniformia	ANCESTRAL SPECIES		ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00960000190111	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Ursidae	ANCESTRAL SPECIES	1	ENSGT00390000007797	ENSGT00940000155530	ENSGT00960000190111	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847.b
Ursus	ANCESTRAL SPECIES	167	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527
American black bear	MODERN SPECIES	5721																NXPE3 (ENSUAMG00000008635) ##22	NFKBIZ (ENSUAMG00000008592)
Polar bear	MODERN SPECIES	241	NIT2 (ENSUMAG00000002024)	TOMM70 (ENSUMAG00000002032)	LNP1 (ENSUMAG00000002103)	TMEM45A (ENSUMAG00000002117)	ADGRG7 (ENSUMAG00000002129)	TFG (ENSUMAG00000002159)	ENSUMAG00000002246	IMPG2 (ENSUMAG00000002739)	SENP7 (ENSUMAG00000002805)	ENSUMAG00000003247	TRMT10C (ENSUMAG00000003252)	PCNP (ENSUMAG00000003255)	ZBTB11 (ENSUMAG00000003270)	RPL24 (ENSUMAG00000003275)	CEP97 (ENSUMAG00000003280)	NXPE3 (ENSUMAG00000003310) ##22	NFKBIZ (ENSUMAG00000003315)	ZPLD1 (ENSUMAG00000003433)
Giant Panda	MODERN SPECIES		LNP1 (ENSAMEG00000003936)	TMEM45A (ENSAMEG00000003920)	ENSAMEG00000030906	ADGRG7 (ENSAMEG00000003893)	TFG (ENSAMEG00000003873)	ENSAMEG00000003855	ENSAMEG00000003833	IMPG2 (ENSAMEG00000003809)	SENP7 (ENSAMEG00000003787)	ENSAMEG00000027303	TRMT10C (ENSAMEG00000019657)	ENSAMEG00000025873	ZBTB11 (ENSAMEG00000003761)	RPL24 (ENSAMEG00000003740)	CEP97 (ENSAMEG00000003720)	NXPE3 (ENSAMEG00000003713) ##22	NFKBIZ (ENSAMEG00000003689)	ZPLD1 (ENSAMEG00000007822)	ALCAM (ENSAMEG00000005848)	CBLB (ENSAMEG00000005895)	CCDC54 (ENSAMEG00000002600)	BBX (ENSAMEG00000002574)	CD47 (ENSAMEG00000001447)	IFT57 (ENSAMEG00000001429)	CIP2A (ENSAMEG00000000975)	DZIP3 (ENSAMEG00000000938)	ENSAMEG00000023932	TRAT1 (ENSAMEG00000023581)	GUCA1C (ENSAMEG00000010184)	MORC1 (ENSAMEG00000010162)	C3orf85 (ENSAMEG00000029894)
Mustelinae	ANCESTRAL SPECIES	124	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00960000190111	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527
American mink	MODERN SPECIES	168	TOMM70 (ENSNVIG00000017175)	LNP1 (ENSNVIG00000017190)	TMEM45A (ENSNVIG00000017210)	ENSNVIG00000017226	ADGRG7 (ENSNVIG00000017236)	TFG (ENSNVIG00000017297)	ENSNVIG00000017433	IMPG2 (ENSNVIG00000017469)	SENP7 (ENSNVIG00000017530)	ENSNVIG00000017704	TRMT10C (ENSNVIG00000017717)	PCNP (ENSNVIG00000017722)	ZBTB11 (ENSNVIG00000017745)	RPL24 (ENSNVIG00000017795)	CEP97 (ENSNVIG00000017835)	NXPE3 (ENSNVIG00000017901) ##22	NFKBIZ (ENSNVIG00000017926)	ZPLD1 (ENSNVIG00000018030)
Ferret	MODERN SPECIES	329	NIT2 (ENSMPUG00000011450)	TOMM70 (ENSMPUG00000011454)	LNP1 (ENSMPUG00000011460)	TMEM45A (ENSMPUG00000011465)	ADGRG7 (ENSMPUG00000011468)	TFG (ENSMPUG00000011505)	ABI3BP (ENSMPUG00000011530)	IMPG2 (ENSMPUG00000011680)	SENP7 (ENSMPUG00000011687)	ENSMPUG00000011693	TRMT10C (ENSMPUG00000019979)	ENSMPUG00000011696	ZBTB11 (ENSMPUG00000011727)	RPL24 (ENSMPUG00000011738)	CEP97 (ENSMPUG00000011762)	NXPE3 (ENSMPUG00000011769) ##22	NFKBIZ (ENSMPUG00000011786)	ZPLD1 (ENSMPUG00000011794)
Canidae	ANCESTRAL SPECIES	35	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000154197.b.b.`b.a	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Canis_lupus	ANCESTRAL SPECIES	31	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000154197.b.b.`b.a	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.a	ENSGT00390000004910	ENSGT00940000162847
Dingo	MODERN SPECIES	65	ADGRG7 (ENSCAFG00020009338)	TFG (ENSCAFG00020009325)	ENSCAFG00020009274	ENSCAFG00020009270	ENSCAFG00020009265	IMPG2 (ENSCAFG00020009220)	ENSCAFG00020009217	SENP7 (ENSCAFG00020008889)	ENSCAFG00020008867	ENSCAFG00020008864	TRMT10C (ENSCAFG00020008862)	PCNP (ENSCAFG00020008846)	ZBTB11 (ENSCAFG00020008835)	RPL24 (ENSCAFG00020008829)	CEP97 (ENSCAFG00020008805)	NXPE3 (ENSCAFG00020008802) ##22	NFKBIZ (ENSCAFG00020008790)	ZPLD1 (ENSCAFG00020008754)	ENSCAFG00020008738	ALCAM (ENSCAFG00020008731)	CBLB (ENSCAFG00020008526)	ENSCAFG00020008488	CCDC54 (ENSCAFG00020008463)	BBX (ENSCAFG00020008323)	CD47 (ENSCAFG00020008300)	IFT57 (ENSCAFG00020008287)	MYH15 (ENSCAFG00020008254)	CIP2A (ENSCAFG00020008089)	DZIP3 (ENSCAFG00020007716)	ENSCAFG00020007673	TRAT1 (ENSCAFG00020007659)
Dog	MODERN SPECIES	26	LNP1 (ENSCAFG00845018529)	TMEM45A (ENSCAFG00845018650)	ENSCAFG00845018737	TFG (ENSCAFG00845018817)	ABI3BP (ENSCAFG00845019194)	IMPG2 (ENSCAFG00845019782)	SENP7 (ENSCAFG00845020235)	ENSCAFG00845021152	ENSCAFG00845021173	ENSCAFG00845021216	TRMT10C (ENSCAFG00845021243)	PCNP (ENSCAFG00845021277)	ZBTB11 (ENSCAFG00845021345)	RPL24 (ENSCAFG00845021526)	CEP97 (ENSCAFG00845021636)	NXPE3 (ENSCAFG00845021747) ##22	NFKBIZ (ENSCAFG00845021884)	ZPLD1 (ENSCAFG00845022199)	ENSCAFG00845022304	ALCAM (ENSCAFG00845022356)	ENSCAFG00845022553	CBLB (ENSCAFG00845022767)	ENSCAFG00845023207	CCDC54 (ENSCAFG00845023224)	BBX (ENSCAFG00845023396)	CD47 (ENSCAFG00845024257)	IFT57 (ENSCAFG00845024514)	MYH15 (ENSCAFG00845024820)	CIP2A (ENSCAFG00845025731)	DZIP3 (ENSCAFG00845026061)	ENSCAFG00845026866
Red fox	MODERN SPECIES	6	ENSVVUG00000021671	TMEM45A (ENSVVUG00000021673)	ADGRG7 (ENSVVUG00000021678)	TFG (ENSVVUG00000021705)	ENSVVUG00000021712	ENSVVUG00000021714	IMPG2 (ENSVVUG00000021721)	SENP7 (ENSVVUG00000021731)	ENSVVUG00000021732	ENSVVUG00000021734	TRMT10C (ENSVVUG00000021735)	PCNP (ENSVVUG00000021736)	ZBTB11 (ENSVVUG00000021737)	RPL24 (ENSVVUG00000021739)	CEP97 (ENSVVUG00000021740)	NXPE3 (ENSVVUG00000021743) ##22	NFKBIZ (ENSVVUG00000021744)	ENSVVUG00000021747	ZPLD1 (ENSVVUG00000021754)	ENSVVUG00000021771	ENSVVUG00000021772	ENSVVUG00000021773	ALCAM (ENSVVUG00000021774)	CBLB (ENSVVUG00000021782)	ENSVVUG00000021795	CCDC54 (ENSVVUG00000021808)	BBX (ENSVVUG00000021813)	CD47 (ENSVVUG00000021818)	IFT57 (ENSVVUG00000021819)	MYH15 (ENSVVUG00000021822)	CIP2A (ENSVVUG00000021833)
Felidae	ANCESTRAL SPECIES	9	ENSGT00550000074838.a	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a	ENSGT00950000183224
Panthera	ANCESTRAL SPECIES	17	ENSGT00550000074838.a	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000158890.p.b.i	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Panthera_a	ANCESTRAL SPECIES	21	ENSGT00550000074838.a	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000158890.p.b.i	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
lion	MODERN SPECIES	9	NIT2 (ENSPLOG00000021124)	TOMM70 (ENSPLOG00000021068)	LNP1 (ENSPLOG00000021035)	TMEM45A (ENSPLOG00000021004)	ADGRG7 (ENSPLOG00000020918)	TFG (ENSPLOG00000020872)	ABI3BP (ENSPLOG00000020083)	IMPG2 (ENSPLOG00000019785)	SENP7 (ENSPLOG00000018908)	ENSPLOG00000018748	TRMT10C (ENSPLOG00000018734)	PCNP (ENSPLOG00000018702)	ZBTB11 (ENSPLOG00000018667)	RPL24 (ENSPLOG00000018595)	CEP97 (ENSPLOG00000018537)	NXPE3 (ENSPLOG00000018491) ##22	NFKBIZ (ENSPLOG00000018353)	ZPLD1 (ENSPLOG00000018203)	ENSPLOG00000018185	ENSPLOG00000018146	ALCAM (ENSPLOG00000018051)	CBLB (ENSPLOG00000017808)	BBX (ENSPLOG00000017287)	CD47 (ENSPLOG00000017080)	IFT57 (ENSPLOG00000016980)	MYH15 (ENSPLOG00000016647)	CIP2A (ENSPLOG00000016592)	DZIP3 (ENSPLOG00000016260)	RETNLB (ENSPLOG00000016164)	TRAT1 (ENSPLOG00000016072)	GUCA1C (ENSPLOG00000015969)
leopard	MODERN SPECIES	15	TBC1D23 (ENSPPRG00000011883)	NIT2 (ENSPPRG00000009685)	TOMM70 (ENSPPRG00000009283)	ENSPPRG00000016133	TMEM45A (ENSPPRG00000008950)	ADGRG7 (ENSPPRG00000008062)	TFG (ENSPPRG00000006943)	ABI3BP (ENSPPRG00000004230)	IMPG2 (ENSPPRG00000002457)	SENP7 (ENSPPRG00000001509)	ENSPPRG00000012526	PCNP (ENSPPRG00000012101)	ZBTB11 (ENSPPRG00000011422)	RPL24 (ENSPPRG00000010867)	ENSPPRG00000010345	NXPE3 (ENSPPRG00000009736) ##22	NFKBIZ (ENSPPRG00000008337)	ZPLD1 (ENSPPRG00000006029)	ENSPPRG00000015307	ALCAM (ENSPPRG00000000316)	CBLB (ENSPPRG00000023033)	BBX (ENSPPRG00000020908)	CD47 (ENSPPRG00000009910)	IFT57 (ENSPPRG00000008931)	MYH15 (ENSPPRG00000006464)	CIP2A (ENSPPRG00000004105)	DZIP3 (ENSPPRG00000001970)	RETNLB (ENSPPRG00000001055)	TRAT1 (ENSPPRG00000000849)	GUCA1C (ENSPPRG00000023029)	MORC1 (ENSPPRG00000023217)
Tiger	MODERN SPECIES	515	NIT2 (ENSPTIG00000016277)	TOMM70 (ENSPTIG00000017112)	LNP1 (ENSPTIG00000020217)	TMEM45A (ENSPTIG00000020505)	ADGRG7 (ENSPTIG00000021639)	TFG (ENSPTIG00000005348)	ABI3BP (ENSPTIG00000011137)	IMPG2 (ENSPTIG00000008303)	SENP7 (ENSPTIG00000015934)	ENSPTIG00000001062	TRMT10C (ENSPTIG00000002271)	PCNP (ENSPTIG00000003467)	ZBTB11 (ENSPTIG00000006323)	RPL24 (ENSPTIG00000007914)	CEP97 (ENSPTIG00000009777)	NXPE3 (ENSPTIG00000011011) ##22	NFKBIZ (ENSPTIG00000012261)	ZPLD1 (ENSPTIG00000013044)	ENSPTIG00000002819
Cat	MODERN SPECIES	240	TOMM70 (ENSFCAG00000030491)	NIT2 (ENSFCAG00000028635)	LNP1 (ENSFCAG00000005919)	TMEM45A (ENSFCAG00000022857)	ADGRG7 (ENSFCAG00000010466)	TFG (ENSFCAG00000025659)	ABI3BP (ENSFCAG00000014954)	IMPG2 (ENSFCAG00000028946)	SENP7 (ENSFCAG00000026175)	ENSFCAG00000046331	TRMT10C (ENSFCAG00000003430)	PCNP (ENSFCAG00000043424)	ZBTB11 (ENSFCAG00000014254)	CEP97 (ENSFCAG00000003326)	RPL24 (ENSFCAG00000003327)	NXPE3 (ENSFCAG00000003328) ##22	ENSFCAG00000053069	NFKBIZ (ENSFCAG00000018764)	ZPLD1 (ENSFCAG00000028706)	ALCAM (ENSFCAG00000007030)	CBLB (ENSFCAG00000004555)	BBX (ENSFCAG00000007296)	CD47 (ENSFCAG00000009530)	IFT57 (ENSFCAG00000028784)	MYH15 (ENSFCAG00000004874)	CIP2A (ENSFCAG00000004878)	DZIP3 (ENSFCAG00000018094)	RETNLB (ENSFCAG00000036016)	TRAT1 (ENSFCAG00000041379)	ENSFCAG00000036878	GUCA1C (ENSFCAG00000005788)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Equus	ANCESTRAL SPECIES	19	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157290.h	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Donkey	MODERN SPECIES	25	TOMM70 (ENSEASG00005010992)	LNP1 (ENSEASG00005030320)	TMEM45A (ENSEASG00005010996)	ADGRG7 (ENSEASG00005010998)	TFG (ENSEASG00005010999)	ABI3BP (ENSEASG00005011007)	IMPG2 (ENSEASG00005011034)	ENSEASG00005011180	SENP7 (ENSEASG00005011056)	ENSEASG00005033252	TRMT10C (ENSEASG00005032264)	PCNP (ENSEASG00005024087)	ZBTB11 (ENSEASG00005011192)	ENSEASG00005011193	CEP97 (ENSEASG00005011204)	NXPE3 (ENSEASG00005037548) ##22	NFKBIZ (ENSEASG00005011239)	ZPLD1 (ENSEASG00005011243)	ALCAM (ENSEASG00005011247)	CBLB (ENSEASG00005011252)	CCDC54 (ENSEASG00005037721)	BBX (ENSEASG00005011264)	CD47 (ENSEASG00005011269)	IFT57 (ENSEASG00005011273)	HHLA2 (ENSEASG00005036335)	MYH15 (ENSEASG00005011281)	CIP2A (ENSEASG00005011292)	DZIP3 (ENSEASG00005011304)	ENSEASG00005011323	RETNLB (ENSEASG00005030397)	TRAT1 (ENSEASG00005036682)
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a.g.b	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00950000183224
Megabat	MODERN SPECIES	3464								IMPG2 (ENSPVAG00000009879)	SENP7 (ENSPVAG00000009883)	ENSPVAG00000009884	TRMT10C (ENSPVAG00000009885)	PCNP (ENSPVAG00000009886)	ZBTB11 (ENSPVAG00000009887)	RPL24 (ENSPVAG00000009889)	CEP97 (ENSPVAG00000009890)	NXPE3 (ENSPVAG00000009893) ##22	NFKBIZ (ENSPVAG00000009894)
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00950000185406	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f	ENSGT00900000141090	ENSGT00950000183105.A.m.a.g.b	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00950000183224	ENSGT00390000004871.b
Greater horseshoe bat	MODERN SPECIES	11	NIT2 (ENSRFEG00010006324)	TOMM70 (ENSRFEG00010006381)	LNP1 (ENSRFEG00010006445)	TMEM45A (ENSRFEG00010006497)	ADGRG7 (ENSRFEG00010006561)	TFG (ENSRFEG00010006677)	IMPG2 (ENSRFEG00010006776)	SENP7 (ENSRFEG00010007032)	ENSRFEG00010007592	ENSRFEG00010007631	TRMT10C (ENSRFEG00010007670)	ENSRFEG00010007685	ZBTB11 (ENSRFEG00010007730)	ENSRFEG00010007848	CEP97 (ENSRFEG00010007929)	NXPE3 (ENSRFEG00010008146) ##22	NFKBIZ (ENSRFEG00010008219)	ZPLD1 (ENSRFEG00010008304)	ENSRFEG00010008514	ENSRFEG00010008533	ALCAM (ENSRFEG00010008572)	CBLB (ENSRFEG00010008884)	BBX (ENSRFEG00010008999)	ENSRFEG00010009130	CD47 (ENSRFEG00010009154)	IFT57 (ENSRFEG00010009221)	ENSRFEG00010009263	CIP2A (ENSRFEG00010009298)	DZIP3 (ENSRFEG00010009819)	ENSRFEG00010009859	TRAT1 (ENSRFEG00010009896)
Microbat	MODERN SPECIES	1077	ENSMLUG00000028186	TBC1D23 (ENSMLUG00000001883)	CMSS1 (ENSMLUG00000001131)	FILIP1L (ENSMLUG00000001126)	COL8A1 (ENSMLUG00000001120)	ENSMLUG00000028203	DCBLD2 (ENSMLUG00000004889)	ST3GAL6 (ENSMLUG00000026201)	CPOX (ENSMLUG00000008326)	GPR15 (ENSMLUG00000009711)	CLDND1 (ENSMLUG00000013947)	OR5K4 (ENSMLUG00000024918)	ENSMLUG00000028481	ENSMLUG00000030742	CEP97 (ENSMLUG00000011957)	NXPE3 (ENSMLUG00000017459) ##22	NFKBIZ (ENSMLUG00000017089)	ZPLD1 (ENSMLUG00000002286)	ENSMLUG00000010377
Eulipotyphla	ANCESTRAL SPECIES	626															ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B
Hedgehog	MODERN SPECIES	4182																NXPE3 (ENSEEUG00000002564) ##22
Common shrew	MODERN SPECIES	4056															CEP97 (ENSSARG00000008665)	NXPE3 (ENSSARG00000008682) ##22	NFKBIZ (ENSSARG00000008696)
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010218.f.a.a	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Tree shrew	MODERN SPECIES	5204															CEP97 (ENSTBEG00000006452)	NXPE3 (ENSTBEG00000007173) ##22	NFKBIZ (ENSTBEG00000007663)
Glires	ANCESTRAL SPECIES	2	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Rodentia	ANCESTRAL SPECIES	2	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Hystricomorpha	ANCESTRAL SPECIES	18	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530.l	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000004910	ENSGT00940000153998.a	ENSGT00950000183224	ENSGT00390000004871.b
Hystricomorpha_a	ANCESTRAL SPECIES	36	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530.l	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000004910	ENSGT00940000153998.a	ENSGT00950000183224	ENSGT00390000004871.b
Hystricomorpha_b	ANCESTRAL SPECIES	32	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530.l	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000004910	ENSGT00940000153998.a	ENSGT00950000183224	ENSGT00390000004871.b
Degu	MODERN SPECIES	122	ENSODEG00000005682	ENSODEG00000019267	ENSODEG00000006299	TMEM45A (ENSODEG00000005098)	ADGRG7 (ENSODEG00000005676)	ENSODEG00000005535	ABI3BP (ENSODEG00000005855)	IMPG2 (ENSODEG00000006079)	ENSODEG00000005550	SENP7 (ENSODEG00000006738)	ENSODEG00000005207	ENSODEG00000019290	ZBTB11 (ENSODEG00000006262)	ENSODEG00000005842	ENSODEG00000006503	NXPE3 (ENSODEG00000006809) ##22	ENSODEG00000007096	ENSODEG00000005326	NFKBIZ (ENSODEG00000005703)	ENSODEG00000005667	ENSODEG00000007067	ZPLD1 (ENSODEG00000007525)	ENSODEG00000006114
Long-tailed chinchilla	MODERN SPECIES	134	NIT2 (ENSCLAG00000007923)	TOMM70 (ENSCLAG00000011192)	LNP1 (ENSCLAG00000008245)	ENSCLAG00000010077	ENSCLAG00000009908	ADGRG7 (ENSCLAG00000012275)	TFG (ENSCLAG00000010813)	ABI3BP (ENSCLAG00000016033)	IMPG2 (ENSCLAG00000011686)	SENP7 (ENSCLAG00000008777)	TRMT10C (ENSCLAG00000017738)	ENSCLAG00000013389	ZBTB11 (ENSCLAG00000009208)	RPL24 (ENSCLAG00000010755)	ENSCLAG00000007680	NXPE3 (ENSCLAG00000008857) ##22	NFKBIZ (ENSCLAG00000008036)	ENSCLAG00000009442	ZPLD1 (ENSCLAG00000011511)	ALCAM (ENSCLAG00000011855)	CBLB (ENSCLAG00000010209)	BBX (ENSCLAG00000008912)	ENSCLAG00000009218	IFT57 (ENSCLAG00000009845)	HHLA2 (ENSCLAG00000016514)	MYH15 (ENSCLAG00000009232)	CIP2A (ENSCLAG00000010915)	DZIP3 (ENSCLAG00000011996)	TRAT1 (ENSCLAG00000010923)	MORC1 (ENSCLAG00000011276)	C3orf85 (ENSCLAG00000011289)
Guinea pig	MODERN SPECIES	35	ENSCPOG00000021674	TBC1D23 (ENSCPOG00000008200)	NIT2 (ENSCPOG00000039760)	TOMM70 (ENSCPOG00000011278)	ENSCPOG00000039816	TMEM45A (ENSCPOG00000031639)	ADGRG7 (ENSCPOG00000010063)	TFG (ENSCPOG00000014758)	ABI3BP (ENSCPOG00000014760)	IMPG2 (ENSCPOG00000008342)	SENP7 (ENSCPOG00000007909)	ENSCPOG00000036309	ZBTB11 (ENSCPOG00000000510)	ENSCPOG00000034974	CEP97 (ENSCPOG00000038103)	NXPE3 (ENSCPOG00000037836) ##22	NFKBIZ (ENSCPOG00000009725)	ZPLD1 (ENSCPOG00000002547)	ALCAM (ENSCPOG00000013172)	CBLB (ENSCPOG00000000606)	BBX (ENSCPOG00000003575)	CD47 (ENSCPOG00000039553)	IFT57 (ENSCPOG00000008103)	MYH15 (ENSCPOG00000003154)	ENSCPOG00000030719	CIP2A (ENSCPOG00000000567)	DZIP3 (ENSCPOG00000004402)	TRAT1 (ENSCPOG00000004684)	MORC1 (ENSCPOG00000015244)	C3orf85 (ENSCPOG00000040560)	ENSCPOG00000020679
Naked mole-rat female	MODERN SPECIES	11	NIT2 (ENSHGLG00000003817)	TOMM70 (ENSHGLG00000004139)	TMEM45A (ENSHGLG00000005643)	ADGRG7 (ENSHGLG00000019585)	TFG (ENSHGLG00000008981)	ABI3BP (ENSHGLG00000002717)	ENSHGLG00000006284	ENSHGLG00000042855	ENSHGLG00000006730	ENSHGLG00000003974	ENSHGLG00000039901	TRMT10C (ENSHGLG00000035444)	ZBTB11 (ENSHGLG00000001683)	RPL24 (ENSHGLG00000001765)	CEP97 (ENSHGLG00000040290)	NXPE3 (ENSHGLG00000011899) ##22	NFKBIZ (ENSHGLG00000019593)	ENSHGLG00000019492	ENSHGLG00000032435	ENSHGLG00000049479	ENSHGLG00000011658	ENSHGLG00000042295	ENSHGLG00000013730	ENSHGLG00000050354	ENSHGLG00000032310	ENSHGLG00000011495	CBLB (ENSHGLG00000014056)	ENSHGLG00000021267	ENSHGLG00000011469	ENSHGLG00000048665	ENSHGLG00000010700
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a	ENSGT00950000183224
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000157095	ENSGT00390000009405.a.a.b	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00900000143563	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Marmotini_b	ANCESTRAL SPECIES	150	ENSGT00940000157095	ENSGT00390000009405.a.a.b	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527
Arctic ground squirrel	MODERN SPECIES	293											TRMT10C (ENSUPAG00010020476)	ENSUPAG00010020479	ZBTB11 (ENSUPAG00010020492)	RPL24 (ENSUPAG00010020498)	CEP97 (ENSUPAG00010020505)	NXPE3 (ENSUPAG00010020518) ##22	NFKBIZ (ENSUPAG00010020526)	ENSUPAG00010020562	ZPLD1 (ENSUPAG00010020567)
Squirrel	MODERN SPECIES	230	TOMM70 (ENSSTOG00000006940)	ENSSTOG00000029568	ENSSTOG00000009151	LNP1 (ENSSTOG00000004844)	ENSSTOG00000009560	ADGRG7 (ENSSTOG00000009569)	TFG (ENSSTOG00000025779)	ABI3BP (ENSSTOG00000001251)	IMPG2 (ENSSTOG00000001280)	SENP7 (ENSSTOG00000001297)	TRMT10C (ENSSTOG00000012199)	ENSSTOG00000029315	ZBTB11 (ENSSTOG00000012200)	RPL24 (ENSSTOG00000014654)	CEP97 (ENSSTOG00000001745)	NXPE3 (ENSSTOG00000019806) ##22	NFKBIZ (ENSSTOG00000028644)	ENSSTOG00000031549	ZPLD1 (ENSSTOG00000007161)
Alpin marmot	MODERN SPECIES	4	ENSMMMG00000015423	ENSMMMG00000015388	LNP1 (ENSMMMG00000015382)	ENSMMMG00000015370	ADGRG7 (ENSMMMG00000015352)	TFG (ENSMMMG00000015347)	ABI3BP (ENSMMMG00000013111)	IMPG2 (ENSMMMG00000012917)	ENSMMMG00000012908	SENP7 (ENSMMMG00000012844)	TRMT10C (ENSMMMG00000012816)	PCNP (ENSMMMG00000012764)	ZBTB11 (ENSMMMG00000012743)	ENSMMMG00000012739	CEP97 (ENSMMMG00000012696)	NXPE3 (ENSMMMG00000012680) ##22	NFKBIZ (ENSMMMG00000012641)	ENSMMMG00000012639	ZPLD1 (ENSMMMG00000012610)	ENSMMMG00000012598	ENSMMMG00000012597	ENSMMMG00000012588	ENSMMMG00000012585	ALCAM (ENSMMMG00000012505)	CBLB (ENSMMMG00000012221)	ENSMMMG00000012211	ENSMMMG00000012197	ENSMMMG00000012189	CCDC54 (ENSMMMG00000012180)	BBX (ENSMMMG00000012093)	CD47 (ENSMMMG00000012070)
Eurasian red squirrel	MODERN SPECIES	1	TOMM70 (ENSSVLG00005016752)	ENSSVLG00005016803	LNP1 (ENSSVLG00005017045)	ENSSVLG00005017103	ADGRG7 (ENSSVLG00005017175)	TFG (ENSSVLG00005017515)	ENSSVLG00005017776	IMPG2 (ENSSVLG00005017818)	SENP7 (ENSSVLG00005018105)	ENSSVLG00005018637	TRMT10C (ENSSVLG00005018651)	ENSSVLG00005018695	ZBTB11 (ENSSVLG00005018859)	RPL24 (ENSSVLG00005019027)	CEP97 (ENSSVLG00005019091)	NXPE3 (ENSSVLG00005019296) ##22	NFKBIZ (ENSSVLG00005019514)	ENSSVLG00005019698	ENSSVLG00005004798	ZPLD1 (ENSSVLG00005004840)	ENSSVLG00005004923	ALCAM (ENSSVLG00005004976)	CBLB (ENSSVLG00005005143)	ENSSVLG00005005236	ENSSVLG00005005260	CCDC54 (ENSSVLG00005005280)	BBX (ENSSVLG00005005300)	CD47 (ENSSVLG00005005377)	IFT57 (ENSSVLG00005005448)	CIP2A (ENSSVLG00005005509)	DZIP3 (ENSSVLG00005005793)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000153998.a
Muroidea	ANCESTRAL SPECIES	11	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a	ENSGT00390000016177.f.e.a.a.b	ENSGT00390000016177.f.e.b
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a	ENSGT00390000016177.f.e.a.a.b	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Chinese hamster chok1gshd	MODERN SPECIES	382	Lnp1 (ENSCGRG00001009736)	Tmem45a (ENSCGRG00001021822)	Adgrg7 (ENSCGRG00001013638)	Tfg (ENSCGRG00001024888)	Abi3bp (ENSCGRG00001017174)	ENSCGRG00001014060	ENSCGRG00001003813	Impg2 (ENSCGRG00001007680)	ENSCGRG00001011976	Senp7 (ENSCGRG00001015956)	Trmt10c (ENSCGRG00001006603)	ENSCGRG00001000257	Zbtb11 (ENSCGRG00001022421)	ENSCGRG00001015975	Cep97 (ENSCGRG00001015516)	Nxpe3 (ENSCGRG00001022052) ##22	Nfkbiz (ENSCGRG00001019170)	Zpld1 (ENSCGRG00001020815)	ENSCGRG00001017751	ENSCGRG00001007203	Alcam (ENSCGRG00001015144)	Cblb (ENSCGRG00001018230)	Ccdc54 (ENSCGRG00001004337)	ENSCGRG00001007688	Bbx (ENSCGRG00001000349)	Cd47 (ENSCGRG00001017701)	Ift57 (ENSCGRG00001003177)	Myh15 (ENSCGRG00001019555)	Cip2a (ENSCGRG00001020735)	Dzip3 (ENSCGRG00001019773)	ENSCGRG00001012688
Golden Hamster	MODERN SPECIES	666										Senp7 (ENSMAUG00000004612)	Trmt10c (ENSMAUG00000009904)	Pcnp (ENSMAUG00000009137)	Zbtb11 (ENSMAUG00000017034)	ENSMAUG00000013489	Cep97 (ENSMAUG00000018030)	Nxpe3 (ENSMAUG00000014860) ##22	Nfkbiz (ENSMAUG00000012092)	Zpld1 (ENSMAUG00000018580)	Alcam (ENSMAUG00000010625)	Cblb (ENSMAUG00000008279)	ENSMAUG00000016326	Bbx (ENSMAUG00000012741)	Cd47 (ENSMAUG00000009968)	Ift57 (ENSMAUG00000001803)	Myh15 (ENSMAUG00000002083)	Cip2a (ENSMAUG00000000178)	Dzip3 (ENSMAUG00000016010)	ENSMAUG00000014727	ENSMAUG00000018846	Retnlb (ENSMAUG00000017128)	Trat1 (ENSMAUG00000000687)
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.f	ENSGT00390000004910	ENSGT00940000153998.a
Prairie vole	MODERN SPECIES	7	Ildr1 (ENSMOCG00000020672)	Cd86 (ENSMOCG00000018575)	Casr (ENSMOCG00000010550)	ENSMOCG00000004379	Ccdc58 (ENSMOCG00000022565)	Fam162a (ENSMOCG00000000950)	Abi3bp (ENSMOCG00000017744)	Impg2 (ENSMOCG00000012977)	ENSMOCG00000001541	Senp7 (ENSMOCG00000014396)	Trmt10c (ENSMOCG00000020572)	ENSMOCG00000019825	Zbtb11 (ENSMOCG00000020592)	Rpl24 (ENSMOCG00000018924)	Cep97 (ENSMOCG00000006949)	Nxpe3 (ENSMOCG00000021355) ##22	Nfkbiz (ENSMOCG00000001612)	Zpld1 (ENSMOCG00000021963)	ENSMOCG00000008717	ENSMOCG00000022599	ENSMOCG00000008918	Alcam (ENSMOCG00000002858)	Cblb (ENSMOCG00000020762)	ENSMOCG00000011608	ENSMOCG00000009635	Bbx (ENSMOCG00000020041)	Cd47 (ENSMOCG00000020195)	Ift57 (ENSMOCG00000010591)	Myh15 (ENSMOCG00000006530)	Cip2a (ENSMOCG00000002988)	Dzip3 (ENSMOCG00000018620)
Northern American deer mouse	MODERN SPECIES	3	Lnp1 (ENSPEMG00000029284)	Tmem45a (ENSPEMG00000017975)	Adgrg7 (ENSPEMG00000015621)	Tfg (ENSPEMG00000004990)	Abi3bp (ENSPEMG00000013685)	Impg2 (ENSPEMG00000008671)	ENSPEMG00000008660	Senp7 (ENSPEMG00000011146)	Trmt10c (ENSPEMG00000006986)	ENSPEMG00000017850	Zbtb11 (ENSPEMG00000013233)	ENSPEMG00000012043	ENSPEMG00000013262	Cep97 (ENSPEMG00000029940)	ENSPEMG00000030353	Nxpe3 (ENSPEMG00000011617) ##22	Nfkbiz (ENSPEMG00000010338)	Zpld1 (ENSPEMG00000007091)	Alcam (ENSPEMG00000013478)	Cblb (ENSPEMG00000013659)	Ccdc54 (ENSPEMG00000027662)	Bbx (ENSPEMG00000007033)	Cd47 (ENSPEMG00000017957)	Ift57 (ENSPEMG00000018735)	ENSPEMG00000028363	Myh15 (ENSPEMG00000009117)	Cip2a (ENSPEMG00000017928)	Dzip3 (ENSPEMG00000019145)	ENSPEMG00000025860	ENSPEMG00000026489	ENSPEMG00000029157
Murinae	ANCESTRAL SPECIES	13	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a.c	ENSGT00390000016177.f.e.a.a.a.d	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Mus	ANCESTRAL SPECIES	13	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.e.a	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a.c	ENSGT00390000016177.f.e.a.a.a.d	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Mus_A	ANCESTRAL SPECIES	18	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a.c	ENSGT00390000016177.f.e.a.a.a.d	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Mus_B	ANCESTRAL SPECIES	18	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a.c	ENSGT00390000016177.f.e.a.a.a.d	ENSGT00390000016177.f.e.b	ENSGT00390000004910
Mouse	MODERN SPECIES	7	Nit2 (ENSMUSG00000022751)	Tomm70a (ENSMUSG00000022752)	Tmem45a2 (ENSMUSG00000046748)	Lnp1 (ENSMUSG00000109588)	Tmem45a (ENSMUSG00000022754)	Adgrg7 (ENSMUSG00000022755)	Tfg (ENSMUSG00000022757)	Abi3bp (ENSMUSG00000035258)	Impg2 (ENSMUSG00000035270)	Senp7 (ENSMUSG00000052917)	Trmt10c (ENSMUSG00000044763)	Pcnp (ENSMUSG00000071533)	Zbtb11 (ENSMUSG00000022601)	Rpl24 (ENSMUSG00000098274)	Cep97 (ENSMUSG00000022604)	Nxpe3 (ENSMUSG00000075033) ##22	Nfkbiz (ENSMUSG00000035356)	Zpld1 (ENSMUSG00000064310)	Alcam (ENSMUSG00000022636)	Cblb (ENSMUSG00000022637)	Ccdc54 (ENSMUSG00000050685)	Bbx (ENSMUSG00000022641)	Cd47 (ENSMUSG00000055447)	Ift57 (ENSMUSG00000032965)	Myh15 (ENSMUSG00000092009)	Cip2a (ENSMUSG00000033031)	Dzip3 (ENSMUSG00000064061)	Retnlg (ENSMUSG00000022651)	Retnla (ENSMUSG00000061100)	Retnlb (ENSMUSG00000022650)	Trat1 (ENSMUSG00000030775)
Mus_C	ANCESTRAL SPECIES	12	ENSGT00550000074838	ENSGT00940000157095	ENSGT00940000155530.l	ENSGT00390000007797	ENSGT00940000155530.k	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.b.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f.e.a.a.a.c	ENSGT00390000016177.f.e.a.a.a.d	ENSGT00390000016177.f.e.b	ENSGT00390000004910
spretus	MODERN SPECIES	7	Tbc1d23 (MGP_SPRETEiJ_G0021722)	Nit2 (MGP_SPRETEiJ_G0021721)	Tomm70a (MGP_SPRETEiJ_G0021720)	Tmem45a2 (MGP_SPRETEiJ_G0021719)	Tmem45a (MGP_SPRETEiJ_G0021718)	Adgrg7 (MGP_SPRETEiJ_G0021717)	Tfg (MGP_SPRETEiJ_G0021716)	MGP_SPRETEiJ_G0021715	Impg2 (MGP_SPRETEiJ_G0021714)	Senp7 (MGP_SPRETEiJ_G0021713)	Trmt10c (MGP_SPRETEiJ_G0021712)	MGP_SPRETEiJ_G0021711	Zbtb11 (MGP_SPRETEiJ_G0021710)	Rpl24 (MGP_SPRETEiJ_G0021709)	Cep97 (MGP_SPRETEiJ_G0021708)	Nxpe3 (MGP_SPRETEiJ_G0021707) ##22	Zpld1 (MGP_SPRETEiJ_G0021705)	Alcam (MGP_SPRETEiJ_G0021704)	Cblb (MGP_SPRETEiJ_G0021703)	Ccdc54 (MGP_SPRETEiJ_G0021702)	Bbx (MGP_SPRETEiJ_G0021701)	Cd47 (MGP_SPRETEiJ_G0021700)	Ift57 (MGP_SPRETEiJ_G0021699)	Myh15 (MGP_SPRETEiJ_G0021698)	Cip2a (MGP_SPRETEiJ_G0021697)	Dzip3 (MGP_SPRETEiJ_G0021696)	Retnlg (MGP_SPRETEiJ_G0021695)	Retnla (MGP_SPRETEiJ_G0021694)	Retnlb (MGP_SPRETEiJ_G0021693)	Trat1 (MGP_SPRETEiJ_G0021692)	Morc1 (MGP_SPRETEiJ_G0021691)
Steppe mouse	MODERN SPECIES	2093															Cep97 (ENSMSIG00000021734)	Nxpe3 (ENSMSIG00000021758) ##22	Nfkbiz (ENSMSIG00000021767)	ENSMSIG00000021859
Shrew mouse	MODERN SPECIES	3	Tbc1d23 (MGP_PahariEiJ_G0016522)	Nit2 (MGP_PahariEiJ_G0016521)	Tomm70a (MGP_PahariEiJ_G0016520)	Tmem45a2 (MGP_PahariEiJ_G0016519)	Tmem45a (MGP_PahariEiJ_G0016518)	Adgrg7 (MGP_PahariEiJ_G0016517)	MGP_PahariEiJ_G0016516	MGP_PahariEiJ_G0016515	Impg2 (MGP_PahariEiJ_G0016514)	Senp7 (MGP_PahariEiJ_G0016513)	Trmt10c (MGP_PahariEiJ_G0016512)	MGP_PahariEiJ_G0016511	Zbtb11 (MGP_PahariEiJ_G0016510)	Rpl24 (MGP_PahariEiJ_G0016509)	Cep97 (MGP_PahariEiJ_G0016508)	Nxpe3 (MGP_PahariEiJ_G0016507) ##22	Nfkbiz (MGP_PahariEiJ_G0016506)	Zpld1 (MGP_PahariEiJ_G0016505)	MGP_PahariEiJ_G0016504	MGP_PahariEiJ_G0016503	Alcam (MGP_PahariEiJ_G0016502)	Cblb (MGP_PahariEiJ_G0016501)	Ccdc54 (MGP_PahariEiJ_G0016500)	Bbx (MGP_PahariEiJ_G0016499)	Cd47 (MGP_PahariEiJ_G0016498)	Ift57 (MGP_PahariEiJ_G0016497)	Myh15 (MGP_PahariEiJ_G0016496)	Cip2a (MGP_PahariEiJ_G0016495)	Dzip3 (MGP_PahariEiJ_G0016494)	Retnlg (MGP_PahariEiJ_G0016493)	Retnla (MGP_PahariEiJ_G0016492)
Rat	MODERN SPECIES	2	Lnp1 (ENSRNOG00000039649)	ENSRNOG00000069996	Tmem45a (ENSRNOG00000042975)	AABR07033979.1 (ENSRNOG00000042474)	Adgrg7 (ENSRNOG00000001634)	Tfg (ENSRNOG00000001633)	Abi3bp (ENSRNOG00000001627)	Impg2 (ENSRNOG00000001622)	Senp7 (ENSRNOG00000001616)	Trmt10c (ENSRNOG00000039567)	Pcnp (ENSRNOG00000028411)	Zbtb11 (ENSRNOG00000001613)	Gng5-ps4 (ENSRNOG00000039562)	Rpl24 (ENSRNOG00000001611)	Cep97 (ENSRNOG00000001609)	Nxpe3 (ENSRNOG00000001608) ##22	Nfkbiz (ENSRNOG00000031163)	Zpld1 (ENSRNOG00000039517)	Hmgb2l1 (ENSRNOG00000033321)	Alcam (ENSRNOG00000001989)	Cblb (ENSRNOG00000001982)	Ccdc54 (ENSRNOG00000028005)	Bbx (ENSRNOG00000001971)	Rpl26-ps9 (ENSRNOG00000065215)	Cd47 (ENSRNOG00000001964)	Ift57 (ENSRNOG00000001958)	LOC100909977 (ENSRNOG00000042598)	Myh15 (ENSRNOG00000061038)	Cip2a (ENSRNOG00000039183)	Dzip3 (ENSRNOG00000001956)	Retnlg (ENSRNOG00000001943)
Upper Galilee mountains blind mole rat	MODERN SPECIES	426									ENSNGAG00000011222	ENSNGAG00000010965	Trmt10c (ENSNGAG00000022215)	ENSNGAG00000023401	Zbtb11 (ENSNGAG00000022088)	Rpl24 (ENSNGAG00000011140)	Cep97 (ENSNGAG00000018638)	Nxpe3 (ENSNGAG00000006814) ##22	Nfkbiz (ENSNGAG00000009837)	Zpld1 (ENSNGAG00000021322)
Lesser Egyptian jerboa	MODERN SPECIES	187						Tmem45a (ENSJJAG00000017418)	Adgrg7 (ENSJJAG00000017637)	ENSJJAG00000018134	ENSJJAG00000020498	Impg2 (ENSJJAG00000021040)	Senp7 (ENSJJAG00000022320)	ENSJJAG00000003951	Zbtb11 (ENSJJAG00000004464)	ENSJJAG00000016512	Cep97 (ENSJJAG00000017444)	Nxpe3 (ENSJJAG00000018826) ##22	Nfkbiz (ENSJJAG00000019118)	ENSJJAG00000019459	ENSJJAG00000019593	Zpld1 (ENSJJAG00000021262)	Alcam (ENSJJAG00000022217)	Cblb (ENSJJAG00000015925)
Kangaroo rat	MODERN SPECIES	392	ENSDORG00000026785	Tbc1d23 (ENSDORG00000012078)	Nit2 (ENSDORG00000008997)	Tomm70a (ENSDORG00000009000)	Tmem45a (ENSDORG00000009581)	ENSDORG00000008383	Abi3bp (ENSDORG00000008386)	ENSDORG00000026946	Impg2 (ENSDORG00000014596)	Senp7 (ENSDORG00000002593)	Trmt10c (ENSDORG00000027529)	Pcnp (ENSDORG00000023644)	Zbtb11 (ENSDORG00000016640)	ENSDORG00000029678	ENSDORG00000029611	Nxpe3 (ENSDORG00000005604) ##22	Nfkbiz (ENSDORG00000009331)	Zpld1 (ENSDORG00000015259)
Lagomorpha	ANCESTRAL SPECIES	9	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000004910	ENSGT00940000153998.a	ENSGT00390000004871.b	ENSGT00390000004871.a
Pika	MODERN SPECIES	4556												PCNP (ENSOPRG00000004207)	ZBTB11 (ENSOPRG00000004224)	RPL24 (ENSOPRG00000004255)	CEP97 (ENSOPRG00000004277)	NXPE3 (ENSOPRG00000004302) ##22	NFKBIZ (ENSOPRG00000004328)
Rabbit	MODERN SPECIES	5	TBC1D23 (ENSOCUG00000017704)	NIT2 (ENSOCUG00000026081)	TOMM70 (ENSOCUG00000001266)	LNP1 (ENSOCUG00000006124)	TMEM45A (ENSOCUG00000016151)	ADGRG7 (ENSOCUG00000005322)	TFG (ENSOCUG00000005327)	ABI3BP (ENSOCUG00000005336)	IMPG2 (ENSOCUG00000029725)	SENP7 (ENSOCUG00000005266)	TRMT10C (ENSOCUG00000011103)	ENSOCUG00000011110	ZBTB11 (ENSOCUG00000017649)	ENSOCUG00000000791	CEP97 (ENSOCUG00000011426)	NXPE3 (ENSOCUG00000000131) ##22	NFKBIZ (ENSOCUG00000000133)	ENSOCUG00000036703	ZPLD1 (ENSOCUG00000015697)	ALCAM (ENSOCUG00000011289)	CBLB (ENSOCUG00000005590)	ENSOCUG00000023352	CCDC54 (ENSOCUG00000016263)	BBX (ENSOCUG00000001686)	ENSOCUG00000003966	IFT57 (ENSOCUG00000003973)	ENSOCUG00000001452	ENSOCUG00000024027	ENSOCUG00000006159	ENSOCUG00000031726	CIP2A (ENSOCUG00000003095)
Primates	ANCESTRAL SPECIES	1	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010218.f.a.a	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010218.f.a.a	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00390000007797	ENSGT00940000155530.j	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010218.f.a.a	ENSGT00950000185406	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847
Mouse lemur	MODERN SPECIES		LNP1 (ENSMICG00000049303)	ENSMICG00000048985	ENSMICG00000049055	ENSMICG00000048831	ENSMICG00000049110	ADGRG7 (ENSMICG00000049327)	TFG (ENSMICG00000049522)	ABI3BP (ENSMICG00000049175)	IMPG2 (ENSMICG00000049387)	ENSMICG00000049138	SENP7 (ENSMICG00000049322)	ENSMICG00000049084	ZBTB11 (ENSMICG00000049238)	RPL24 (ENSMICG00000049277)	CEP97 (ENSMICG00000049248)	NXPE3 (ENSMICG00000048875) ##22	NFKBIZ (ENSMICG00000048907)	ZPLD1 (ENSMICG00000049229)	ENSMICG00000049337	ALCAM (ENSMICG00000049040)	CBLB (ENSMICG00000049194)	CCDC54 (ENSMICG00000049447)	BBX (ENSMICG00000049362)	ENSMICG00000049094	CD47 (ENSMICG00000048926)	IFT57 (ENSMICG00000049261)	HHLA2 (ENSMICG00000048964)	ENSMICG00000049290	DZIP3 (ENSMICG00000048858)	RETNLB (ENSMICG00000049230)	TRAT1 (ENSMICG00000049400)
Lemuriformes_a	ANCESTRAL SPECIES	79	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530.j	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010218.f.a.a	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Coquerels sifaka	MODERN SPECIES	545	LNP1 (ENSPCOG00000019981)	TMEM45A (ENSPCOG00000003096)	ADGRG7 (ENSPCOG00000018112)	TFG (ENSPCOG00000013360)	ABI3BP (ENSPCOG00000000174)	ENSPCOG00000015454	IMPG2 (ENSPCOG00000019074)	ENSPCOG00000015976	SENP7 (ENSPCOG00000019516)	ENSPCOG00000023943	PCNP (ENSPCOG00000027764)	ZBTB11 (ENSPCOG00000027234)	RPL24 (ENSPCOG00000002493)	ENSPCOG00000022342	CEP97 (ENSPCOG00000019850)	NXPE3 (ENSPCOG00000027837) ##22	ENSPCOG00000025056	NFKBIZ (ENSPCOG00000023299)	ENSPCOG00000027710	ENSPCOG00000019631	ENSPCOG00000004639	ZPLD1 (ENSPCOG00000007555)
Greater bamboo lemur	MODERN SPECIES	572													ZBTB11 (ENSPSMG00000006051)	RPL24 (ENSPSMG00000006020)	CEP97 (ENSPSMG00000005986)	NXPE3 (ENSPSMG00000005951) ##22	NFKBIZ (ENSPSMG00000005927)	ENSPSMG00000005899	ZPLD1 (ENSPSMG00000005890)	ALCAM (ENSPSMG00000005823)	CBLB (ENSPSMG00000005758)	CCDC54 (ENSPSMG00000005672)	ENSPSMG00000005668	BBX (ENSPSMG00000005421)	CD47 (ENSPSMG00000005307)	IFT57 (ENSPSMG00000005302)	HHLA2 (ENSPSMG00000005283)	CIP2A (ENSPSMG00000005260)	DZIP3 (ENSPSMG00000005167)	RETNLB (ENSPSMG00000005048)	TRAT1 (ENSPSMG00000005044)
Bushbaby	MODERN SPECIES	335						ENSOGAG00000031768	TFG (ENSOGAG00000001246)	ABI3BP (ENSOGAG00000001247)	IMPG2 (ENSOGAG00000030513)	SENP7 (ENSOGAG00000001812)	ENSOGAG00000001817	TRMT10C (ENSOGAG00000001819)	PCNP (ENSOGAG00000001821)	RPL24 (ENSOGAG00000013843)	CEP97 (ENSOGAG00000010141)	NXPE3 (ENSOGAG00000007139) ##22	ENSOGAG00000031463	NFKBIZ (ENSOGAG00000025293)	ZPLD1 (ENSOGAG00000016106)
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910
Tarsier	MODERN SPECIES	7274										ZNF658 (ENSTSYG00000007541)	ENSTSYG00000013480	PCNP (ENSTSYG00000034837)	ZBTB11 (ENSTSYG00000002309)	RPL24 (ENSTSYG00000002314)	CEP97 (ENSTSYG00000002955)	NXPE3 (ENSTSYG00000001010) ##22	NFKBIZ (ENSTSYG00000014138)
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000010218.f.a.a	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Hominidae	ANCESTRAL SPECIES	2	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.f.a.a	ENSGT00390000010218.f.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063424.b.c	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00940000153288.a.b.a.a	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000012691.d	ENSGT00390000010218.f.a.a	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00940000161158.e.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692
Gorilla	MODERN SPECIES	16	ABI3BP (ENSGGOG00000005715)	ENSGGOG00000041876	IMPG2 (ENSGGOG00000016107)	SENP7 (ENSGGOG00000009993)	ENSGGOG00000025191	ENSGGOG00000036273	ENSGGOG00000042980	TRMT10C (ENSGGOG00000006484)	ENSGGOG00000025423	ENSGGOG00000024459	ZBTB11 (ENSGGOG00000011023)	ENSGGOG00000011609	ENSGGOG00000038287	ENSGGOG00000038585	CEP97 (ENSGGOG00000025229)	NXPE3 (ENSGGOG00000041969) ##22	NFKBIZ (ENSGGOG00000003769)	ZPLD1 (ENSGGOG00000012040)	ALCAM (ENSGGOG00000008482)	CBLB (ENSGGOG00000022475)	ENSGGOG00000041160	ENSGGOG00000041003	CCDC54 (ENSGGOG00000024323)	BBX (ENSGGOG00000028441)	CD47 (ENSGGOG00000007652)	IFT57 (ENSGGOG00000006807)	HHLA2 (ENSGGOG00000007491)	MYH15 (ENSGGOG00000007498)	ENSGGOG00000025381	CIP2A (ENSGGOG00000034901)	DZIP3 (ENSGGOG00000006973)
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063424.b.c	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00940000153288.a.b.a.a	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000012691.d	ENSGT00390000010218.f.a.a	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910
Pan	ANCESTRAL SPECIES	2	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063424.b.c	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00940000153288.a.b.a.a	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000012691.d	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00940000154295.z	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00940000161158.e.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692
Bonobo	MODERN SPECIES	16	ADGRG7 (ENSPPAG00000031344)	TFG (ENSPPAG00000037507)	ABI3BP (ENSPPAG00000033043)	ENSPPAG00000032302	IMPG2 (ENSPPAG00000036700)	SENP7 (ENSPPAG00000043455)	ENSPPAG00000036143	ENSPPAG00000041785	ENSPPAG00000042314	ENSPPAG00000032628	ENSPPAG00000006374	ZBTB11 (ENSPPAG00000033448)	RPL24 (ENSPPAG00000020565)	ENSPPAG00000029641	CEP97 (ENSPPAG00000033067)	NXPE3 (ENSPPAG00000034481) ##22	NFKBIZ (ENSPPAG00000034769)	ZPLD1 (ENSPPAG00000033167)	ALCAM (ENSPPAG00000039255)	CBLB (ENSPPAG00000032439)	ENSPPAG00000025999	ENSPPAG00000026809	CCDC54 (ENSPPAG00000021130)	BBX (ENSPPAG00000036135)	CD47 (ENSPPAG00000027094)	IFT57 (ENSPPAG00000026634)	HHLA2 (ENSPPAG00000033534)	MYH15 (ENSPPAG00000008814)	CIP2A (ENSPPAG00000017998)	DZIP3 (ENSPPAG00000027753)	RETNLB (ENSPPAG00000034427)
Chimpanzee	MODERN SPECIES	16	ABI3BP (ENSPTRG00000015166)	ENSPTRG00000049208	IMPG2 (ENSPTRG00000015167)	SENP7 (ENSPTRG00000015168)	ENSPTRG00000044061	ENSPTRG00000051126	TRMT10C (ENSPTRG00000015171)	PCNP (ENSPTRG00000015172)	ENSPTRG00000047285	ZBTB11 (ENSPTRG00000015174)	ENSPTRG00000046386	ENSPTRG00000015176	ENSPTRG00000043270	ENSPTRG00000012286	CEP97 (ENSPTRG00000015177)	NXPE3 (ENSPTRG00000015178) ##22	NFKBIZ (ENSPTRG00000015179)	ZPLD1 (ENSPTRG00000015180)	ALCAM (ENSPTRG00000015182)	CBLB (ENSPTRG00000015184)	ENSPTRG00000047495	ENSPTRG00000045079	CCDC54 (ENSPTRG00000015186)	BBX (ENSPTRG00000015187)	ENSPTRG00000044643	CD47 (ENSPTRG00000015188)	IFT57 (ENSPTRG00000015189)	HHLA2 (ENSPTRG00000015190)	MYH15 (ENSPTRG00000015191)	CIP2A (ENSPTRG00000015193)	DZIP3 (ENSPTRG00000024365)
Human	MODERN SPECIES	15	TBC1D23 (ENSG00000036054)	NIT2 (ENSG00000114021)	TOMM70 (ENSG00000154174)	LNP1 (ENSG00000206535)	TMEM45A (ENSG00000181458)	ADGRG7 (ENSG00000144820)	TFG (ENSG00000114354)	ABI3BP (ENSG00000154175)	IMPG2 (ENSG00000081148)	SENP7 (ENSG00000138468)	TRMT10C (ENSG00000174173)	PCNP (ENSG00000081154)	ZBTB11 (ENSG00000066422)	RPL24 (ENSG00000114391)	CEP97 (ENSG00000182504)	NXPE3 (ENSG00000144815) ##22	NFKBIZ (ENSG00000144802)	ZPLD1 (ENSG00000170044)	ALCAM (ENSG00000170017)	CBLB (ENSG00000114423)	CCDC54 (ENSG00000138483)	BBX (ENSG00000114439)	CD47 (ENSG00000196776)	IFT57 (ENSG00000114446)	HHLA2 (ENSG00000114455)	MYH15 (ENSG00000144821)	CIP2A (ENSG00000163507)	DZIP3 (ENSG00000198919)	RETNLB (ENSG00000163515)	TRAT1 (ENSG00000163519)	GUCA1C (ENSG00000138472)
Orangutan	MODERN SPECIES	16	NIT2 (ENSPPYG00000013604)	TOMM70 (ENSPPYG00000013603)	LNP1 (ENSPPYG00000013602)	TMEM45A (ENSPPYG00000013600)	ADGRG7 (ENSPPYG00000013598)	TFG (ENSPPYG00000013597)	ABI3BP (ENSPPYG00000013596)	IMPG2 (ENSPPYG00000013595)	SENP7 (ENSPPYG00000013594)	TRMT10C (ENSPPYG00000013592)	ENSPPYG00000014472	PCNP (ENSPPYG00000013591)	ZBTB11 (ENSPPYG00000013589)	RPL24 (ENSPPYG00000013588)	CEP97 (ENSPPYG00000013587)	NXPE3 (ENSPPYG00000013586) ##22	NFKBIZ (ENSPPYG00000013585)	ZPLD1 (ENSPPYG00000013583)	ALCAM (ENSPPYG00000013581)	CBLB (ENSPPYG00000013580)	ENSPPYG00000032146	CCDC54 (ENSPPYG00000013579)	BBX (ENSPPYG00000013578)	CD47 (ENSPPYG00000013577)	IFT57 (ENSPPYG00000013576)	HHLA2 (ENSPPYG00000013575)	MYH15 (ENSPPYG00000013574)	CIP2A (ENSPPYG00000013573)	DZIP3 (ENSPPYG00000013572)	RETNLB (ENSPPYG00000013571)	TRAT1 (ENSPPYG00000013570)
Gibbon	MODERN SPECIES	13	NIT2 (ENSNLEG00000002631)	TOMM70 (ENSNLEG00000002680)	LNP1 (ENSNLEG00000002733)	TMEM45A (ENSNLEG00000031582)	ADGRG7 (ENSNLEG00000002768)	TFG (ENSNLEG00000002849)	ABI3BP (ENSNLEG00000002937)	IMPG2 (ENSNLEG00000003095)	ENSNLEG00000035099	SENP7 (ENSNLEG00000003107)	ENSNLEG00000032548	PCNP (ENSNLEG00000036084)	ZBTB11 (ENSNLEG00000003243)	ENSNLEG00000003276	CEP97 (ENSNLEG00000003282)	NXPE3 (ENSNLEG00000003309) ##22	NFKBIZ (ENSNLEG00000003323)	ZPLD1 (ENSNLEG00000003378)	ALCAM (ENSNLEG00000003402)	CBLB (ENSNLEG00000003523)	ENSNLEG00000036024	ENSNLEG00000033260	CCDC54 (ENSNLEG00000018438)	BBX (ENSNLEG00000003524)	ENSNLEG00000036328	CD47 (ENSNLEG00000003645)	IFT57 (ENSNLEG00000030315)	HHLA2 (ENSNLEG00000003742)	MYH15 (ENSNLEG00000003747)	CIP2A (ENSNLEG00000003800)	DZIP3 (ENSNLEG00000003895)
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00390000008920.c.a.q.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00390000008920.c.a.q.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Vervet Monkey	MODERN SPECIES	14	TOMM70 (ENSCSAG00000006060)	LNP1 (ENSCSAG00000006065)	TMEM45A (ENSCSAG00000006071)	ADGRG7 (ENSCSAG00000006085)	TFG (ENSCSAG00000006093)	ABI3BP (ENSCSAG00000006151)	IMPG2 (ENSCSAG00000006196)	ENSCSAG00000018723	SENP7 (ENSCSAG00000006231)	TRMT10C (ENSCSAG00000018722)	ENSCSAG00000006248	ENSCSAG00000018721	ZBTB11 (ENSCSAG00000006253)	ENSCSAG00000006256	CEP97 (ENSCSAG00000006262)	NXPE3 (ENSCSAG00000006265) ##22	NFKBIZ (ENSCSAG00000006272)	ZPLD1 (ENSCSAG00000006281)	ALCAM (ENSCSAG00000006293)	CBLB (ENSCSAG00000006301)	CCDC54 (ENSCSAG00000018720)	BBX (ENSCSAG00000006313)	CD47 (ENSCSAG00000006317)	IFT57 (ENSCSAG00000006322)	HHLA2 (ENSCSAG00000006326)	MYH15 (ENSCSAG00000006344)	CIP2A (ENSCSAG00000006366)	DZIP3 (ENSCSAG00000006386)	RETNLB (ENSCSAG00000006391)	TRAT1 (ENSCSAG00000006397)	GUCA1C (ENSCSAG00000006405)
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000155530	ENSGT00940000159169	ENSGT00390000008920.c.a.q.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00390000012976.c.b.a.a.b	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00390000004856.w.a.a.b.a.a.a	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692
Macaca	ANCESTRAL SPECIES	5	ENSGT00940000155530	ENSGT00940000159169	ENSGT00390000008920.c.a.q.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00390000012976.c.b.a.a.b	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00390000004856.w.a.a.b.a.a.a	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00950000183198.c.b.a	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f
Pig-tailed macaque	MODERN SPECIES	545	LNP1 (ENSMNEG00000036651)	TMEM45A (ENSMNEG00000032719)	ADGRG7 (ENSMNEG00000035882)	ENSMNEG00000026927	TFG (ENSMNEG00000028246)	ABI3BP (ENSMNEG00000039863)	IMPG2 (ENSMNEG00000019829)	SENP7 (ENSMNEG00000034444)	ENSMNEG00000043641	ENSMNEG00000038744	ENSMNEG00000032826	ENSMNEG00000028646	ZBTB11 (ENSMNEG00000040650)	RPL24 (ENSMNEG00000033010)	CEP97 (ENSMNEG00000031114)	NXPE3 (ENSMNEG00000032855) ##22	NFKBIZ (ENSMNEG00000035736)	ENSMNEG00000029296	ZPLD1 (ENSMNEG00000041037)	ENSMNEG00000023503	ALCAM (ENSMNEG00000039658)	CBLB (ENSMNEG00000035250)	ENSMNEG00000044050	BBX (ENSMNEG00000029292)	ENSMNEG00000027109	CD47 (ENSMNEG00000040225)	IFT57 (ENSMNEG00000040705)	HHLA2 (ENSMNEG00000034481)	MYH15 (ENSMNEG00000029556)	CIP2A (ENSMNEG00000013923)	DZIP3 (ENSMNEG00000044860)
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00940000155530	ENSGT00940000159169	ENSGT00390000008920.c.a.q.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00390000012976.c.b.a.a.b	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.q.b.c	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00390000004856.w.a.a.b.a.a.a	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000153876.B.j.b	ENSGT00390000008948	ENSGT00940000158592	ENSGT00910000147280	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692
Olive baboon	MODERN SPECIES	11	TMEM45A (ENSPANG00000014747)	ADGRG7 (ENSPANG00000006084)	TFG (ENSPANG00000005129)	ABI3BP (ENSPANG00000009916)	ENSPANG00000038042	IMPG2 (ENSPANG00000017183)	SENP7 (ENSPANG00000005243)	ENSPANG00000032659	ENSPANG00000044303	ENSPANG00000012400	TRMT10C (ENSPANG00000011784)	PCNP (ENSPANG00000034032)	ZBTB11 (ENSPANG00000021636)	RPL24 (ENSPANG00000021719)	CEP97 (ENSPANG00000000403)	NXPE3 (ENSPANG00000025575) ##22	NFKBIZ (ENSPANG00000006771)	ENSPANG00000047468	ZPLD1 (ENSPANG00000018975)	ALCAM (ENSPANG00000009915)	CBLB (ENSPANG00000007141)	ENSPANG00000048087	ENSPANG00000030283	CCDC54 (ENSPANG00000047290)	BBX (ENSPANG00000018335)	ENSPANG00000048699	CD47 (ENSPANG00000020528)	IFT57 (ENSPANG00000002089)	HHLA2 (ENSPANG00000016518)	MYH15 (ENSPANG00000006082)	CIP2A (ENSPANG00000007140)
Cercopithecinae_d	ANCESTRAL SPECIES	162	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00390000008920.c.a.q.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00390000012976.c.b.a.a.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.q.b.c	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00390000004856.w.a.a.b.a.a.a	ENSGT00940000156527
Sooty mangabey	MODERN SPECIES	258	LNP1 (ENSCATG00000039201)	TMEM45A (ENSCATG00000029802)	ADGRG7 (ENSCATG00000031346)	ENSCATG00000024708	TFG (ENSCATG00000018889)	ABI3BP (ENSCATG00000002681)	IMPG2 (ENSCATG00000006718)	SENP7 (ENSCATG00000032014)	ENSCATG00000039128	ENSCATG00000037420	ENSCATG00000037151	ENSCATG00000042673	ZBTB11 (ENSCATG00000037658)	ENSCATG00000040562	CEP97 (ENSCATG00000035351)	NXPE3 (ENSCATG00000035123) ##22	NFKBIZ (ENSCATG00000010523)	ENSCATG00000018735	ZPLD1 (ENSCATG00000041557)
Drill	MODERN SPECIES	1049												ENSMLEG00000040029	ZBTB11 (ENSMLEG00000036283)	ENSMLEG00000041418	CEP97 (ENSMLEG00000036880)	NXPE3 (ENSMLEG00000042933) ##22	NFKBIZ (ENSMLEG00000037298)	ENSMLEG00000036170	ZPLD1 (ENSMLEG00000037028)
Rhinopithecus	ANCESTRAL SPECIES	451							ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00870000136521.g.b.a	ENSGT00390000012976.c.b.a.a.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B
Golden snub-nosed monkey	MODERN SPECIES	2843									ENSRROG00000029782	ENSRROG00000032792	PCNP (ENSRROG00000045263)	ENSRROG00000015533	ZBTB11 (ENSRROG00000029953)	ENSRROG00000045426	CEP97 (ENSRROG00000041124)	NXPE3 (ENSRROG00000044299) ##22	NFKBIZ (ENSRROG00000033908)
Black snub-nosed monkey	MODERN SPECIES	294								IMPG2 (ENSRBIG00000037261)	SENP7 (ENSRBIG00000042341)	ENSRBIG00000028972	ENSRBIG00000033445	ENSRBIG00000043858	ZBTB11 (ENSRBIG00000023111)	ENSRBIG00000033278	CEP97 (ENSRBIG00000033344)	NXPE3 (ENSRBIG00000033297) ##22	NFKBIZ (ENSRBIG00000029869)	ENSRBIG00000043224	ZPLD1 (ENSRBIG00000012597)
Platyrrhini	ANCESTRAL SPECIES	37	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Cebidae	ANCESTRAL SPECIES	35	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Cebidae_a	ANCESTRAL SPECIES	96	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095	ENSGT00390000007797	ENSGT00940000155530	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00900000141090	ENSGT00950000183105.A.m.a.r	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00390000007697	ENSGT00390000006307	ENSGT00940000162944	ENSGT00940000160318	ENSGT00940000153251.a	ENSGT00940000161692	ENSGT00390000016177.f	ENSGT00390000004910	ENSGT00940000162847	ENSGT00940000153998.a
Capuchin	MODERN SPECIES	321							ENSCCAG00000031599	IMPG2 (ENSCCAG00000032459)	ENSCCAG00000021011	SENP7 (ENSCCAG00000020496)	ENSCCAG00000023829	ENSCCAG00000025122	ZBTB11 (ENSCCAG00000021381)	RPL24 (ENSCCAG00000028454)	CEP97 (ENSCCAG00000024054)	NXPE3 (ENSCCAG00000027685) ##22	NFKBIZ (ENSCCAG00000028806)	ZPLD1 (ENSCCAG00000029948)
Bolivian squirrel monkey	MODERN SPECIES	154											TRMT10C (ENSSBOG00000023326)	PCNP (ENSSBOG00000026258)	ZBTB11 (ENSSBOG00000021979)	ENSSBOG00000034432	CEP97 (ENSSBOG00000023309)	NXPE3 (ENSSBOG00000028414) ##22	NFKBIZ (ENSSBOG00000025036)	ZPLD1 (ENSSBOG00000028961)	ENSSBOG00000020654	ENSSBOG00000020566	ALCAM (ENSSBOG00000026824)	CBLB (ENSSBOG00000029105)	ENSSBOG00000025877	BBX (ENSSBOG00000023090)	CD47 (ENSSBOG00000025655)	IFT57 (ENSSBOG00000022035)	HHLA2 (ENSSBOG00000029829)	MYH15 (ENSSBOG00000005752)	CIP2A (ENSSBOG00000030237)	DZIP3 (ENSSBOG00000024351)	RETNLB (ENSSBOG00000021579)
Marmoset	MODERN SPECIES	6	TBC1D23 (ENSCJAG00000000594)	NIT2 (ENSCJAG00000000590)	TOMM70 (ENSCJAG00000000584)	LNP1 (ENSCJAG00000000579)	ENSCJAG00000072444	TMEM45A (ENSCJAG00000000576)	ADGRG7 (ENSCJAG00000000558)	ABI3BP (ENSCJAG00000000533)	IMPG2 (ENSCJAG00000000522)	SENP7 (ENSCJAG00000000515)	TRMT10C (ENSCJAG00000000514)	PCNP (ENSCJAG00000052282)	ZBTB11 (ENSCJAG00000000499)	ENSCJAG00000000496	CEP97 (ENSCJAG00000000493)	NXPE3 (ENSCJAG00000000487) ##22	NFKBIZ (ENSCJAG00000000465)	ENSCJAG00000039819	ENSCJAG00000082414	ENSCJAG00000087035	ZPLD1 (ENSCJAG00000000461)	ENSCJAG00000086808	ENSCJAG00000085265	ENSCJAG00000058123	ENSCJAG00000057185	ENSCJAG00000022350	ENSCJAG00000079921	ALCAM (ENSCJAG00000004708)	CBLB (ENSCJAG00000004804)	ENSCJAG00000076708	ENSCJAG00000075959
Mas night monkey	MODERN SPECIES	1126	TOMM70 (ENSANAG00000020825)	LNP1 (ENSANAG00000031808)	TMEM45A (ENSANAG00000023330)	ENSANAG00000038428	ADGRG7 (ENSANAG00000033047)	TFG (ENSANAG00000028599)	ABI3BP (ENSANAG00000023600)	IMPG2 (ENSANAG00000035194)	ENSANAG00000028398	SENP7 (ENSANAG00000033170)	ENSANAG00000023844	ENSANAG00000025605	ZBTB11 (ENSANAG00000019774)	RPL24 (ENSANAG00000023643)	CEP97 (ENSANAG00000028903)	NXPE3 (ENSANAG00000024245) ##22	NFKBIZ (ENSANAG00000037144)	ZPLD1 (ENSANAG00000035317)	ALCAM (ENSANAG00000036946)	CBLB (ENSANAG00000022121)	GNG5B (ENSANAG00000020272)	BBX (ENSANAG00000034642)
Platypus	MODERN SPECIES	8	TBC1D23 (ENSOANG00000007527)	NIT2 (ENSOANG00000007526)	TOMM70 (ENSOANG00000007525)	ENSOANG00000007524	TMEM45A (ENSOANG00000007523)	ENSOANG00000007521	ENSOANG00000007519	TFG (ENSOANG00000007518)	SENP7 (ENSOANG00000007510)	ENSOANG00000007509	ENSOANG00000007508	PCNP (ENSOANG00000047540)	ZBTB11 (ENSOANG00000007506)	RPL24 (ENSOANG00000007505)	CEP97 (ENSOANG00000007504)	NXPE3 (ENSOANG00000037640) ##22	NFKBIZ (ENSOANG00000007502)	ZPLD1 (ENSOANG00000007501)	ALCAM (ENSOANG00000047661)	CBLB (ENSOANG00000007499)	BBX (ENSOANG00000007497)	CD47 (ENSOANG00000007496)	IFT57 (ENSOANG00000007495)	ENSOANG00000050746	CIP2A (ENSOANG00000008829)	ENSOANG00000008828	ENSOANG00000036804	NECTIN3 (ENSOANG00000039030)	ZBED2 (ENSOANG00000042237)	ENSOANG00000039709	PLCXD2 (ENSOANG00000047330)
Anura	ANCESTRAL SPECIES	23	ENSGT00940000158619	ENSGT00510000047168	ENSGT00390000001798	ENSGT00390000006915.c.c.b	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00910000144283	ENSGT00950000183105.A	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00940000156527	ENSGT00940000164443.a	ENSGT00940000156881	ENSGT00940000156631.B	ENSGT00940000158592	ENSGT00940000162944	ENSGT00390000006307	ENSGT00940000160705.B	ENSGT00940000153251.a	ENSGT00390000004910	ENSGT01010000229200	ENSGT00390000009030	ENSGT00940000155420.b	ENSGT00390000001360
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000003517	OFD1 (ENSLLEG00000003485)	GPM6B (ENSLLEG00000003307)	TFG (ENSLLEG00000003060)	ENSLLEG00000002929	IMPG2 (ENSLLEG00000002779)	ENSLLEG00000002741	SENP7 (ENSLLEG00000002641)	ENSLLEG00000002597	TRMT10C (ENSLLEG00000002585)	PCNP (ENSLLEG00000002567)	TXNL4B (ENSLLEG00000002470)	ZBTB11 (ENSLLEG00000002518)	CEP97 (ENSLLEG00000002334)	ENSLLEG00000002278	NXPE3 (ENSLLEG00000002257) ##22	ENSLLEG00000002249	NFKBIZ (ENSLLEG00000002178)	ZPLD1 (ENSLLEG00000002142)	ENSLLEG00000002130	ENSLLEG00000002121	ALCAM (ENSLLEG00000002002)	ENSLLEG00000001962	ENSLLEG00000001952	CBLB (ENSLLEG00000001871)	ENSLLEG00000001842	ENSLLEG00000001834	BBX (ENSLLEG00000001716)	ENSLLEG00000001628	IFT57 (ENSLLEG00000001579)	ENSLLEG00000001561
Frog	MODERN SPECIES	2	ube2g1 (ENSXETG00000026172)	ENSXETG00000048164	ankfy1 (ENSXETG00000030210)	cyb5d2 (ENSXETG00000018225)	zzef1 (ENSXETG00000029987)	atp2a3 (ENSXETG00000031538)	p2rx1 (ENSXETG00000032959)	camkk1 (ENSXETG00000033917)	ENSXETG00000041632	mis12 (ENSXETG00000009185)	derl2 (ENSXETG00000009183)	dhx33 (ENSXETG00000009173)	rcc1l (ENSXETG00000009171)	cep97 (ENSXETG00000009170)	rpl24 (ENSXETG00000008052)	nxpe3 (ENSXETG00000006995) ##22	XB5965586 [provisional:nfkbiz] (ENSXETG00000032514)	ENSXETG00000048847	zpld1 (ENSXETG00000006999)	ENSXETG00000038473	alcam (ENSXETG00000016124)	cblb (ENSXETG00000016127)	bbx (ENSXETG00000016131)	hhla2 (ENSXETG00000016135)	ift57 (ENSXETG00000026185)	myh15 (ENSXETG00000016136)	cip2a (ENSXETG00000016139)	sh2d1b (ENSXETG00000045754)	ENSXETG00000044930	ENSXETG00000035280	mrps23 (ENSXETG00000016140)
Coelacanth	MODERN SPECIES	1553									si:ch73-41e3.7 (ENSLACG00000001532)	TXNL4B (ENSLACG00000001808)	TRMT10C (ENSLACG00000002036)	PCNP (ENSLACG00000002432)	ZBTB11 (ENSLACG00000003387)	RPL24 (ENSLACG00000004303)	CEP97 (ENSLACG00000004823)	NXPE3 (ENSLACG00000006242) ##22	NFKBIZ (ENSLACG00000006974)	ZPLD1 (ENSLACG00000010996)
Actinopterygii	ANCESTRAL SPECIES	32	ENSGT00940000158272	ENSGT00940000161415	ENSGT00390000005596.a	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00510000047334	ENSGT00390000004056	ENSGT00390000011985	ENSGT00950000183134.c.a.a	ENSGT00390000000155.a.a	ENSGT00390000018895.a	ENSGT00950000183058.A.b	ENSGT00950000183058.A.a	ENSGT00940000160248	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a
Reedfish	MODERN SPECIES	12	zgc:112083 (ENSECRG00000002909)	PRDM15 (ENSECRG00000002877)	C2CD2 (ENSECRG00000002856)	atg101 (ENSECRG00000002851)	ZBTB21 (ENSECRG00000002844)	ENSECRG00000002834	ENSECRG00000002828	MAP6 (ENSECRG00000002822)	mogat2 (ENSECRG00000002814)	dgat2 (ENSECRG00000002807)	uvrag (ENSECRG00000002795)	ENSECRG00000002787	wnt11 (ENSECRG00000002768)	ENSECRG00000002752	DOCK9 (ENSECRG00000002654)	nxpe3 (ENSECRG00000002616) ##22	NFKBIZ (ENSECRG00000002600)	eed (ENSECRG00000002586)	hikeshi (ENSECRG00000002579)	CCDC81 (ENSECRG00000002568)	me3 (ENSECRG00000002542)	PRSS23 (ENSECRG00000002500)	tmem39a (ENSECRG00000002466)	ildr1a (ENSECRG00000002446)	ILDR2 (ENSECRG00000002435)	ENSECRG00000002425	GPA33 (ENSECRG00000002415)	ENSECRG00000002377	dusp27 (ENSECRG00000002295)	pou2f1b (ENSECRG00000002245)	CD247 (ENSECRG00000002223)
Neopterygii	ANCESTRAL SPECIES	15	ENSGT00940000158147	ENSGT00940000158272	ENSGT00390000005596.a	ENSGT00940000159169	ENSGT00510000047809	ENSGT00530000063558.A	ENSGT00530000063503.a.a	ENSGT00940000157308	ENSGT00530000063907.d	ENSGT00390000010779.a.b.b	ENSGT00530000063169.b.b	ENSGT00390000010218	ENSGT00900000141090	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00510000047334	ENSGT00390000004056	ENSGT00390000011985	ENSGT00950000183134.c.a.a	ENSGT00390000000155.a.a	ENSGT00390000018895.a	ENSGT00950000183058.A.b	ENSGT00950000183058.A.a	ENSGT00940000160248	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a
Spotted gar	MODERN SPECIES	655	dcbld2 (ENSLOCG00000009438)	COL8A1 (ENSLOCG00000009451)	jagn1b (ENSLOCG00000009456)	ADGRG7 (ENSLOCG00000009466)	tfg (ENSLOCG00000009472)	abi3bpb (ENSLOCG00000009480)	IMPG2 (ENSLOCG00000009490)	senp7b (ENSLOCG00000009501)	si:ch73-41e3.7 (ENSLOCG00000009518)	txnl4b (ENSLOCG00000009526)	trmt10c (ENSLOCG00000017802)	pcnp (ENSLOCG00000009530)	ENSLOCG00000009538	rpl24 (ENSLOCG00000009548)	cep97 (ENSLOCG00000009560)	nxpe3 (ENSLOCG00000009568) ##22	NFKBIZ (ENSLOCG00000009576)	eed (ENSLOCG00000009588)	hikeshi (ENSLOCG00000009599)	CCDC81 (ENSLOCG00000009607)	me3 (ENSLOCG00000009615)	PRSS23 (ENSLOCG00000017803)	tmem39a (ENSLOCG00000009633)	ildr1a (ENSLOCG00000009645)	ildr2 (ENSLOCG00000009660)	GPA33 (ENSLOCG00000009679)	ENSLOCG00000009686	dusp27 (ENSLOCG00000009695)	pou2f1b (ENSLOCG00000009711)	CD247 (ENSLOCG00000009728)	creg1 (ENSLOCG00000009735)
Osteoglossocephalai	ANCESTRAL SPECIES	129													ENSGT00390000010218	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00510000047334	ENSGT00390000004056	ENSGT00390000011985	ENSGT00950000183134.c.a.a	ENSGT00390000000155.a.a	ENSGT00390000018895.a	ENSGT00940000160248.b	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a	ENSGT00940000153118	ENSGT00940000158209
Osteoglossiformes	ANCESTRAL SPECIES	88	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT00940000159090	ENSGT00940000156815	ENSGT00940000167257.a	ENSGT00530000063252.a.b	ENSGT00940000155799	ENSGT00940000165208.c	ENSGT00940000156271	ENSGT01020000230438.B.a.b.i	ENSGT00390000002038	ENSGT00530000063907.d	ENSGT00530000063169.b.b	ENSGT00900000141090	ENSGT00950000183105.A.a	ENSGT00950000182866.D.d.a.d ##22	ENSGT00940000153695.B	ENSGT00950000183134.c.a.a	ENSGT00390000000155.a.a	ENSGT00390000018895.a.d	ENSGT00950000183058.A.b	ENSGT00950000183058.A.a.e	ENSGT00940000160248.a	ENSGT00940000154851.A.a	ENSGT00940000157831	ENSGT00390000018208	ENSGT00390000005914.a	ENSGT00940000158209	ENSGT00940000154474.A	ENSGT00940000154474.B.a	ENSGT00940000154474.B.b
Asian bonytongue	MODERN SPECIES	3	NCAM2 (ENSSFOG00015009238)	gart (ENSSFOG00015009090)	n6amt1 (ENSSFOG00015009049)	ADAMTS5 (ENSSFOG00015031640)	ADAMTS1 (ENSSFOG00015032932)	cyyr1 (ENSSFOG00015008961)	appb (ENSSFOG00015008854)	gabpa (ENSSFOG00015008813)	jam2a (ENSSFOG00015026401)	mrpl39 (ENSSFOG00015008772)	ENSSFOG00015008741	mrpl16 (ENSSFOG00015008725)	si:ch73-41e3.7 (ENSSFOG00015024751)	trmt10c (ENSSFOG00015008704)	ZBTB11 (ENSSFOG00015008656)	nxpe3 (ENSSFOG00015008635) ##22	NFKBIZ (ENSSFOG00015008620)	me3 (ENSSFOG00015008565)	PRSS23 (ENSSFOG00015008532)	tmem39a (ENSSFOG00015008500)	ildr1a (ENSSFOG00015008468)	ildr2 (ENSSFOG00015008440)	ENSSFOG00015008380	ENSSFOG00015030130	pou2f1b (ENSSFOG00015008295)	CD247 (ENSSFOG00015008233)	creg1 (ENSSFOG00015027964)	ENSSFOG00015008204	f7l (ENSSFOG00015008184)	f7 (ENSSFOG00015008174)	f7i (ENSSFOG00015008166)
P. kingsleyae	MODERN SPECIES	107	ncam2 (ENSPKIG00000010979)	gart (ENSPKIG00000010876)	n6amt1 (ENSPKIG00000010822)	ADAMTS5 (ENSPKIG00000010769)	ADAMTS1 (ENSPKIG00000010736)	cyyr1 (ENSPKIG00000010721)	appb (ENSPKIG00000010598)	gabpa (ENSPKIG00000010493)	jam2a (ENSPKIG00000010412)	mrpl39 (ENSPKIG00000010371)	ENSPKIG00000010358	mrpl16 (ENSPKIG00000010334)	trmt10c (ENSPKIG00000010307)	ZBTB11 (ENSPKIG00000010269)	rpl24 (ENSPKIG00000010232)	nxpe3 (ENSPKIG00000010215) ##22	NFKBIZ (ENSPKIG00000010186)	me3 (ENSPKIG00000010119)	PRSS23 (ENSPKIG00000010092)	tmem39a (ENSPKIG00000010068)	ildr1a (ENSPKIG00000010032)	ildr2 (ENSPKIG00000009993)	ENSPKIG00000009968	ENSPKIG00000009925	POU2F1 (ENSPKIG00000009872)	CD247 (ENSPKIG00000009835)	creg1 (ENSPKIG00000009816)	ENSPKIG00000009795	f7l (ENSPKIG00000009762)	f7 (ENSPKIG00000009741)	f7i (ENSPKIG00000009720)
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Tetrapoda	ANCESTRAL SPECIES	102	ENSGT00940000155191.b	ENSGT00390000009664	ENSGT00390000014721	ENSGT01030000234621.D	ENSGT00940000157637.b	ENSGT00940000154419.b	ENSGT00940000164245	ENSGT01040000240444.A.a.b	ENSGT01100000263537.b.a.a.a.a.a	ENSGT00950000183073.a.a.b	ENSGT00940000175410	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182866.D.d.b ##22	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00990000213051	ENSGT01030000234590.B.a.a	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000156128.a	ENSGT01030000234582.f.b.g	ENSGT00390000016398	ENSGT00910000144784	ENSGT00970000193372.a.b	ENSGT00940000160621
Amniota	ANCESTRAL SPECIES	78					ENSGT00940000157637.b	ENSGT00940000154419.a	ENSGT00940000164245	ENSGT01040000240444.A.a.b	ENSGT01100000263537.b.a.a.a.a.a	ENSGT00950000183073.a.a.b	ENSGT00940000175410	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182866.D.d.b ##22	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00990000213051	ENSGT01030000234590.B.a.a	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000156128.a	ENSGT01090000261072	ENSGT00940000162489	ENSGT00940000160621	ENSGT00970000193372.a.b	ENSGT01030000234582.f.b.g	ENSGT00910000144784
Sauria	ANCESTRAL SPECIES	301															ENSGT01050000244897.a.a.a	ENSGT00950000182866.D.d.b ##22
Lepidosauria	ANCESTRAL SPECIES	137									ENSGT00940000156128.a	ENSGT00640000091486.b	ENSGT00390000016193	ENSGT00390000016053	ENSGT00390000014725	ENSGT00950000182923.B.b	ENSGT01050000244897.a.a.a	ENSGT00950000182866.D.d.b ##22	ENSGT00950000182972.a.b	ENSGT00940000170871	ENSGT00940000159929	ENSGT00960000191033	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT01100000263537.b.a.a.a.a.a
Episquamata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Laterata	ANCESTRAL SPECIES	5	ENSGT00950000183053.D	ENSGT00530000066138	ENSGT00940000155842	ENSGT00390000009122	ENSGT00940000160837	ENSGT00940000154772.d	ENSGT00390000001263	ENSGT00940000166060	ENSGT00940000153253.a	ENSGT00390000007346	ENSGT00390000017955.d	ENSGT00940000156245	ENSGT00390000005939.a.a	ENSGT00940000156595	ENSGT00940000156206	ENSGT00950000182866.D.d.b ##22	ENSGT00940000156479.a	ENSGT00940000159220	ENSGT00390000007302	ENSGT00730000111020.b.a	ENSGT00940000158957	ENSGT00940000157305	ENSGT00390000004118	ENSGT00940000156080	ENSGT00940000157508	ENSGT00730000111361	ENSGT00390000016823	ENSGT00940000157751	ENSGT00390000017282	ENSGT00940000158819	ENSGT00940000162435.o
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	15	ENSPMRG00000010311	PHACTR1 (ENSPMRG00000010283)	TBC1D7 (ENSPMRG00000010268)	GFOD1 (ENSPMRG00000010263)	ENSPMRG00000010256	PAK1IP1 (ENSPMRG00000010250)	ENSPMRG00000010240	NUP153 (ENSPMRG00000010107)	FAM8A1 (ENSPMRG00000010067)	CAP2 (ENSPMRG00000010062)	RBM24 (ENSPMRG00000010058)	ATXN1 (ENSPMRG00000010054)	GMPR (ENSPMRG00000010048)	MYLIP (ENSPMRG00000010042)	ENSPMRG00000010034 ##22	ENSPMRG00000010031 ##22	ENSPMRG00000010027	DTNBP1 (ENSPMRG00000010014)	JARID2 (ENSPMRG00000009977)	RNF182 (ENSPMRG00000009960)	MCUR1 (ENSPMRG00000009938)	RANBP9 (ENSPMRG00000009912)	ENSPMRG00000009889	SIRT5 (ENSPMRG00000009851)	KIF13A (ENSPMRG00000007518)	NHLRC1 (ENSPMRG00000006799)	TPMT (ENSPMRG00000006789)	KDM1B (ENSPMRG00000006506)	DEK (ENSPMRG00000006405)	RNF144B (ENSPMRG00000006393)	ID4 (ENSPMRG00000006388)
Common wall lizard	MODERN SPECIES	15	EDN1 (ENSPMRG00000010316)	ENSPMRG00000010311	PHACTR1 (ENSPMRG00000010283)	TBC1D7 (ENSPMRG00000010268)	GFOD1 (ENSPMRG00000010263)	ENSPMRG00000010256	PAK1IP1 (ENSPMRG00000010250)	ENSPMRG00000010240	NUP153 (ENSPMRG00000010107)	FAM8A1 (ENSPMRG00000010067)	CAP2 (ENSPMRG00000010062)	RBM24 (ENSPMRG00000010058)	ATXN1 (ENSPMRG00000010054)	GMPR (ENSPMRG00000010048)	MYLIP (ENSPMRG00000010042)	ENSPMRG00000010034 ##22	ENSPMRG00000010031 ##22	ENSPMRG00000010027	DTNBP1 (ENSPMRG00000010014)	JARID2 (ENSPMRG00000009977)	RNF182 (ENSPMRG00000009960)	MCUR1 (ENSPMRG00000009938)	RANBP9 (ENSPMRG00000009912)	ENSPMRG00000009889	SIRT5 (ENSPMRG00000009851)	KIF13A (ENSPMRG00000007518)	NHLRC1 (ENSPMRG00000006799)	TPMT (ENSPMRG00000006789)	KDM1B (ENSPMRG00000006506)	DEK (ENSPMRG00000006405)	RNF144B (ENSPMRG00000006393)
Argentine black and white tegu	MODERN SPECIES	4	ENSSMRG00000006424	PHACTR1 (ENSSMRG00000006410)	TBC1D7 (ENSSMRG00000006387)	ENSSMRG00000006382	GFOD1 (ENSSMRG00000006380)	ENSSMRG00000006376	PAK1IP1 (ENSSMRG00000006371)	ENSSMRG00000006332	NUP153 (ENSSMRG00000006320)	FAM8A1 (ENSSMRG00000006314)	CAP2 (ENSSMRG00000006303)	RBM24 (ENSSMRG00000006298)	ATXN1 (ENSSMRG00000006238)	GMPR (ENSSMRG00000006210)	MYLIP (ENSSMRG00000006185)	ENSSMRG00000006153 ##22	DTNBP1 (ENSSMRG00000006083)	JARID2 (ENSSMRG00000006063)	CD83 (ENSSMRG00000005894)	ENSSMRG00000005893	RNF182 (ENSSMRG00000005741)	MCUR1 (ENSSMRG00000005735)	RANBP9 (ENSSMRG00000005725)	NOL7 (ENSSMRG00000005722)	SIRT5 (ENSSMRG00000005719)	KIF13A (ENSSMRG00000005690)	NHLRC1 (ENSSMRG00000005677)	TPMT (ENSSMRG00000005676)	KDM1B (ENSSMRG00000005666)	DEK (ENSSMRG00000005662)	ENSSMRG00000005504
tuatara	MODERN SPECIES	1696															ENSSPUG00000016422	ENSSPUG00000016433 ##22	MCM7 (ENSSPUG00000016453)	ENSSPUG00000016494	COPS6 (ENSSPUG00000016508)
Mammalia	ANCESTRAL SPECIES	112			ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b
Platypus	DUPLICATION
Platypus	MODERN SPECIES	88	ENSOANG00000044015	NYAP1 (ENSOANG00000046922)	ENSOANG00000049692	ENSOANG00000039968	MEPCE (ENSOANG00000043331)	ENSOANG00000030990	ENSOANG00000046104	ENSOANG00000045698	STAG3 (ENSOANG00000007542)	ENSOANG00000048372	ENSOANG00000003917	GAL3ST4 (ENSOANG00000040514)	ENSOANG00000042697	TRAPPC14 (ENSOANG00000009933)	LAMTOR4 (ENSOANG00000009932)	ENSOANG00000009679 ##22	MBLAC1 (ENSOANG00000048702)	ENSOANG00000009678	ENSOANG00000050273	KIRREL1 (ENSOANG00000031542)	ENSOANG00000043311	ENSOANG00000041104	ENSOANG00000049547	ARHGEF11 (ENSOANG00000038766)	ENSOANG00000050560	ENSOANG00000039089	ENSOANG00000049515	ENSOANG00000034161	ENSOANG00000047977	RNF115 (ENSOANG00000036987)	ENSOANG00000038849
Platypus	MODERN SPECIES	1	TRIM28 (ENSOANG00000013528)	CHMP2A (ENSOANG00000043544)	ENSOANG00000050247	ENSOANG00000037891	ENSOANG00000000481	ENSOANG00000000479	ENSOANG00000041521	ENSOANG00000048776	ENSOANG00000038021	ENSOANG00000037349	ENSOANG00000047929	ENSOANG00000036639	ENSOANG00000030580	ENSOANG00000003479	ENSOANG00000007045	ENSOANG00000001850 ##22	ENSOANG00000014577	ENSOANG00000010439	ENSOANG00000047750	ENSOANG00000007046	ENSOANG00000042338	ENSOANG00000036054	ENSOANG00000010668	ENSOANG00000010666	ENSOANG00000001336	ENSOANG00000014817	ENSOANG00000048652	ZNF787 (ENSOANG00000047226)	CABP5 (ENSOANG00000002676)	ENSOANG00000039197	ENSOANG00000037181
Theria	ANCESTRAL SPECIES	32	ENSGT00940000161668	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT01030000234576.D.a.b.b.a.a.a
Eutheria	ANCESTRAL SPECIES	22	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00940000165702	ENSGT00940000162113
Atlantogenata	ANCESTRAL SPECIES	21	ENSGT00940000161668	ENSGT00390000007899	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00980000198710	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00940000165702
Xenarthra	ANCESTRAL SPECIES	291																ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00980000198710	ENSGT00940000161607	ENSGT00940000161592	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1548															ENSDNOG00000046442 ##22	ENSDNOG00000048233 ##22	MBLAC1 (ENSDNOG00000047027)	CNPY4 (ENSDNOG00000007931)	TAF6 (ENSDNOG00000007920)	AP4M1 (ENSDNOG00000007911)	MCM7 (ENSDNOG00000007903)	COPS6 (ENSDNOG00000004397)	ENSDNOG00000010382	ZSCAN21 (ENSDNOG00000001868)	ZKSCAN1 (ENSDNOG00000001864)	ENSDNOG00000046531	AZGP1 (ENSDNOG00000048337)	ENSDNOG00000001942	TRIM4 (ENSDNOG00000041714)	ENSDNOG00000045414	ENSDNOG00000036430
Armadillo	MODERN SPECIES	1548																ENSDNOG00000046442 ##22	ENSDNOG00000048233 ##22	MBLAC1 (ENSDNOG00000047027)	CNPY4 (ENSDNOG00000007931)	TAF6 (ENSDNOG00000007920)	AP4M1 (ENSDNOG00000007911)	MCM7 (ENSDNOG00000007903)	COPS6 (ENSDNOG00000004397)	ENSDNOG00000010382	ZSCAN21 (ENSDNOG00000001868)	ZKSCAN1 (ENSDNOG00000001864)	ENSDNOG00000046531	AZGP1 (ENSDNOG00000048337)	ENSDNOG00000001942	TRIM4 (ENSDNOG00000041714)	ENSDNOG00000045414
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j	ENSGT00940000162113
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j	ENSGT00940000162113
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j	ENSGT00940000162113
Glires	ANCESTRAL SPECIES	11	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.a	ENSGT00940000162113
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Rabbit	MODERN SPECIES	493														ENSOCUG00000033220	CNPY4 (ENSOCUG00000000306)	ENSOCUG00000023746 ##22	TAF6 (ENSOCUG00000023479)	AP4M1 (ENSOCUG00000000304)	MCM7 (ENSOCUG00000000300)	COPS6 (ENSOCUG00000000298)	ZNF3 (ENSOCUG00000005390)	ZSCAN21 (ENSOCUG00000015340)	ZKSCAN1 (ENSOCUG00000015333)	ENSOCUG00000025816	AZGP1 (ENSOCUG00000027203)	GJC3 (ENSOCUG00000012436)	TRIM4 (ENSOCUG00000039179)	ENSOCUG00000034133	ENSOCUG00000038804	ENSOCUG00000026110	ENSOCUG00000035935
Rodentia	ANCESTRAL SPECIES	11	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00940000162113	ENSGT00510000055200
Rodentia_B	ANCESTRAL SPECIES	29	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b	ENSGT00950000182958.a.b.b.j.a.a.b
Myomorpha	ANCESTRAL SPECIES	31	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b	ENSGT00950000182958.a.b.b.j.a.a.a.a
Muroidea	ANCESTRAL SPECIES	40	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b
Muroidea_A	ANCESTRAL SPECIES	21	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b.a
Cricetidae	ANCESTRAL SPECIES	20	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.w	ENSGT00390000008831.x	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b.a
Cricetinae	ANCESTRAL SPECIES	27	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.w	ENSGT00390000008831.x	ENSGT00390000017799	ENSGT00950000182972.a.b.cb	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b.a
Chinese hamster chok1gshd	MODERN SPECIES	202	ENSCGRG00001003398	Nyap1 (ENSCGRG00001019510)	Spacdr (ENSCGRG00001013054)	Ppp1r35 (ENSCGRG00001017270)	Mepce (ENSCGRG00001008844)	Zcwpw1 (ENSCGRG00001015211)	ENSCGRG00001009717	ENSCGRG00001014484	ENSCGRG00001023975	Pvrig (ENSCGRG00001006424)	Stag3 (ENSCGRG00001013285)	Gpc2 (ENSCGRG00001009420)	Gal3st4 (ENSCGRG00001023710)	Trappc14 (ENSCGRG00001010144)	Lamtor4 (ENSCGRG00001015252)	Nxpe5 (ENSCGRG00001005222) ##22	Mblac1 (ENSCGRG00001010304)	Cnpy4 (ENSCGRG00001004599)	Taf6 (ENSCGRG00001000372)	Ap4m1 (ENSCGRG00001019453)	Mcm7 (ENSCGRG00001019986)	Cops6 (ENSCGRG00001023206)	Zfp113 (ENSCGRG00001022828)	Zscan21 (ENSCGRG00001012943)	Zkscan1 (ENSCGRG00001017820)	Azgp1 (ENSCGRG00001021087)	Gjc3 (ENSCGRG00001013502)	ENSCGRG00001000804	ENSCGRG00001002470	Cyp3a13 (ENSCGRG00001023453)	ENSCGRG00001014074
Cricetidae_B	ANCESTRAL SPECIES	19	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.w	ENSGT00390000008831.x	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00950000182890.D.c.a.b	ENSGT00940000161607.d	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.b.a	ENSGT00950000182958.a.b.b.j.a.b.b
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	15	ENSPEMG00000027469	ENSPEMG00000028942	ENSPEMG00000025742	ENSPEMG00000024765	ENSPEMG00000027155	ENSPEMG00000026585	ENSPEMG00000029237	ENSPEMG00000025299	Pvrig (ENSPEMG00000016982)	Stag3 (ENSPEMG00000001610)	Gpc2 (ENSPEMG00000017907)	Gal3st4 (ENSPEMG00000017373)	Trappc14 (ENSPEMG00000016781)	Lamtor4 (ENSPEMG00000016501)	ENSPEMG00000026998 ##22	ENSPEMG00000025753 ##22	Mblac1 (ENSPEMG00000013519)	Cnpy4 (ENSPEMG00000013299)	Taf6 (ENSPEMG00000011578)	Ap4m1 (ENSPEMG00000008418)	Mcm7 (ENSPEMG00000004759)	Cops6 (ENSPEMG00000000314)	Zfp113 (ENSPEMG00000018945)	Zscan21 (ENSPEMG00000018646)	Zkscan1 (ENSPEMG00000029949)	ENSPEMG00000026222	ENSPEMG00000030535	Azgp1 (ENSPEMG00000000368)	Gjc3 (ENSPEMG00000014103)	ENSPEMG00000027825	ENSPEMG00000027943
Northern American deer mouse	MODERN SPECIES	15	ENSPEMG00000029649	ENSPEMG00000027469	ENSPEMG00000028942	ENSPEMG00000025742	ENSPEMG00000024765	ENSPEMG00000027155	ENSPEMG00000026585	ENSPEMG00000029237	ENSPEMG00000025299	Pvrig (ENSPEMG00000016982)	Stag3 (ENSPEMG00000001610)	Gpc2 (ENSPEMG00000017907)	Gal3st4 (ENSPEMG00000017373)	Trappc14 (ENSPEMG00000016781)	Lamtor4 (ENSPEMG00000016501)	ENSPEMG00000026998 ##22	ENSPEMG00000025753 ##22	Mblac1 (ENSPEMG00000013519)	Cnpy4 (ENSPEMG00000013299)	Taf6 (ENSPEMG00000011578)	Ap4m1 (ENSPEMG00000008418)	Mcm7 (ENSPEMG00000004759)	Cops6 (ENSPEMG00000000314)	Zfp113 (ENSPEMG00000018945)	Zscan21 (ENSPEMG00000018646)	Zkscan1 (ENSPEMG00000029949)	ENSPEMG00000026222	ENSPEMG00000030535	Azgp1 (ENSPEMG00000000368)	Gjc3 (ENSPEMG00000014103)	ENSPEMG00000027825
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	99	Adap1 (ENSMOCG00000000220)	Get4 (ENSMOCG00000006507)	Sun1 (ENSMOCG00000008565)	ENSMOCG00000018789	Dnaaf5 (ENSMOCG00000013332)	Prkar1b (ENSMOCG00000020126)	Pdgfa (ENSMOCG00000004445)	Foxl3 (ENSMOCG00000014468)	Fam20c (ENSMOCG00000013948)	Pvrig (ENSMOCG00000014941)	Stag3 (ENSMOCG00000019563)	Gpc2 (ENSMOCG00000022440)	Gal3st4 (ENSMOCG00000015923)	Trappc14 (ENSMOCG00000007584)	Lamtor4 (ENSMOCG00000009289)	ENSMOCG00000000195 ##22	ENSMOCG00000017777 ##22	Mblac1 (ENSMOCG00000003204)	Cnpy4 (ENSMOCG00000018726)	Taf6 (ENSMOCG00000007374)	Ap4m1 (ENSMOCG00000015753)	Mcm7 (ENSMOCG00000015282)	ENSMOCG00000016508	Zfp113 (ENSMOCG00000015829)	Zscan21 (ENSMOCG00000020051)	Zkscan1 (ENSMOCG00000003312)	Azgp1 (ENSMOCG00000003953)	Gjc3 (ENSMOCG00000021394)	ENSMOCG00000003273	ENSMOCG00000020066	ENSMOCG00000012531
Prairie vole	MODERN SPECIES	99	Get4 (ENSMOCG00000006507)	Sun1 (ENSMOCG00000008565)	ENSMOCG00000018789	Dnaaf5 (ENSMOCG00000013332)	Prkar1b (ENSMOCG00000020126)	Pdgfa (ENSMOCG00000004445)	Foxl3 (ENSMOCG00000014468)	Fam20c (ENSMOCG00000013948)	Pvrig (ENSMOCG00000014941)	Stag3 (ENSMOCG00000019563)	Gpc2 (ENSMOCG00000022440)	Gal3st4 (ENSMOCG00000015923)	Trappc14 (ENSMOCG00000007584)	Lamtor4 (ENSMOCG00000009289)	ENSMOCG00000000195 ##22	ENSMOCG00000017777 ##22	Mblac1 (ENSMOCG00000003204)	Cnpy4 (ENSMOCG00000018726)	Taf6 (ENSMOCG00000007374)	Ap4m1 (ENSMOCG00000015753)	Mcm7 (ENSMOCG00000015282)	ENSMOCG00000016508	Zfp113 (ENSMOCG00000015829)	Zscan21 (ENSMOCG00000020051)	Zkscan1 (ENSMOCG00000003312)	Azgp1 (ENSMOCG00000003953)	Gjc3 (ENSMOCG00000021394)	ENSMOCG00000003273	ENSMOCG00000020066	ENSMOCG00000012531	ENSMOCG00000017736
Murinae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Mus	ANCESTRAL SPECIES	17	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.z	ENSGT00950000182958.a.b.b.j.a.b.a	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607.d	ENSGT00950000182890.D.c.a.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00640000091486.b	ENSGT00390000014072.B	ENSGT00390000016193	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016053	ENSGT00390000014725	ENSGT00950000182923.B.b	ENSGT01050000244897.a.a.a.c	ENSGT00950000182972.a.b	ENSGT00390000017799	ENSGT00940000153505.a.a.c.a.a.a.b.b	ENSGT00950000182890.D.c.b.a.b.b.b.d.d	ENSGT00950000182951.A.a.a	ENSGT00940000162800	ENSGT00940000159039	ENSGT00940000157513	ENSGT00390000005666	ENSGT00940000155830	ENSGT00390000015750
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000008831.z	ENSGT00390000008831.y	ENSGT00950000182958.a.b.b.j.a.b.a	ENSGT01090000260098.A.o	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607.d	ENSGT00950000182890.D.c.a.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00640000091486.b	ENSGT00390000014072.B	ENSGT00390000016193	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016053	ENSGT00390000014725	ENSGT00950000182923.B.b	ENSGT01050000244897.a.a.a.c	ENSGT00950000182972.a.b	ENSGT00390000017799	ENSGT00940000153505.a.a.c.a.a.a.b.b	ENSGT00940000153505.a.a.c.a.a.b	ENSGT00950000182890.D.c.b.a.b.b.b.d.d	ENSGT00950000182951.A.a.a	ENSGT00940000162800	ENSGT00940000159039	ENSGT00940000157513	ENSGT00390000005666	ENSGT00940000155830
Mus_B	ANCESTRAL SPECIES	4	ENSGT00560000077278.a	ENSGT00390000008831.z	ENSGT00390000008831.y	ENSGT00950000182958.a.b.b.j.a.b.a	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607.d	ENSGT00950000182890.D.c.a.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00640000091486.b	ENSGT00390000014072.B	ENSGT00390000016193	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016053	ENSGT00390000014725	ENSGT00950000182923.B.b	ENSGT01050000244897.a.a.a.c	ENSGT00950000182972.a.b	ENSGT00390000017799	ENSGT00940000153505.a.a.c.a.a.a.b.b	ENSGT00940000153505.a.a.c.a.a.b	ENSGT00950000182890.D.c.b.a.b.b.b.d.d	ENSGT00950000182951.A.a.a	ENSGT00940000162800	ENSGT00940000159039	ENSGT00940000157513	ENSGT00390000005666	ENSGT00940000155830
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.z	ENSGT00950000182958.a.b.b.j.a.b.a	ENSGT01090000260005.a.a.a.a	ENSGT01100000263517.b.d.m.b.a.a	ENSGT00940000161592	ENSGT00940000161607.d	ENSGT00950000182890.D.c.a.b	ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00640000091486.b	ENSGT00390000014072.B	ENSGT00390000016193	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016053	ENSGT00390000014725	ENSGT00950000182923.B.b	ENSGT01050000244897.a.a.a.c	ENSGT00950000182972.a.b	ENSGT00390000017799	ENSGT00940000153505.a.a.c.a.a.a.b.b	ENSGT00940000153505.a.a.c.a.a.b	ENSGT00950000182890.D.c.b.a.b.b.b.d.d	ENSGT00950000182951.A.a.a	ENSGT00940000162800	ENSGT00940000159039	ENSGT00940000157513	ENSGT00390000005666	ENSGT00940000155830
Steppe mouse	MODERN SPECIES	2331							Zkscan1 (ENSMSIG00000004458)	Zscan21 (ENSMSIG00000004434)	Zfp113 (ENSMSIG00000004379)	Cops6 (ENSMSIG00000004354)	Mcm7 (ENSMSIG00000004173)	Ap4m1 (ENSMSIG00000004074)	Taf6 (ENSMSIG00000003996)	ENSMSIG00000003967	Mblac1 (ENSMSIG00000003956)	Nxpe5 (ENSMSIG00000003756) ##22	Lamtor4 (ENSMSIG00000003727)	Trappc14 (ENSMSIG00000003686)	Gal3st4 (ENSMSIG00000003625)	Gpc2 (ENSMSIG00000003554)	Stag3 (ENSMSIG00000003350)	Pvrig (ENSMSIG00000003326)
Mouse	MODERN SPECIES	14	Cyp3a13 (ENSMUSG00000029727)	Gjc3 (ENSMUSG00000056966)	Azgp1 (ENSMUSG00000037053)	Smok3a (ENSMUSG00000075599)	Smok3b (ENSMUSG00000079156)	Smok3c (ENSMUSG00000075598)	Zkscan1 (ENSMUSG00000029729)	Zscan21 (ENSMUSG00000037017)	Zfp113 (ENSMUSG00000037007)	Cops6 (ENSMUSG00000019494)	Mcm7 (ENSMUSG00000029730)	Ap4m1 (ENSMUSG00000019518)	Taf6 (ENSMUSG00000036980)	Cnpy4 (ENSMUSG00000036968)	Mblac1 (ENSMUSG00000049285)	Nxpe5 (ENSMUSG00000047592) ##22	Lamtor4 (ENSMUSG00000050552)	Trappc14 (ENSMUSG00000036948)	Gal3st4 (ENSMUSG00000075593)	Gpc2 (ENSMUSG00000029510)	Stag3 (ENSMUSG00000036928)	Pvrig (ENSMUSG00000109713)	Zfp157 (ENSMUSG00000036898)	1700123K08Rik (ENSMUSG00000029526)	Zfp68 (ENSMUSG00000058291)	A430033K04Rik (ENSMUSG00000056014)	Fam20c (ENSMUSG00000025854)	Foxl3 (ENSMUSG00000094504)	Pdgfa (ENSMUSG00000025856)	Prkar1b (ENSMUSG00000025855)	Dnaaf5 (ENSMUSG00000025857)
Shrew mouse	MODERN SPECIES	15	MGP_PahariEiJ_G0024468	Nyap1 (MGP_PahariEiJ_G0024469)	MGP_PahariEiJ_G0024470	MGP_PahariEiJ_G0024471	MGP_PahariEiJ_G0024472	Azgp1 (MGP_PahariEiJ_G0024473)	Zkscan1 (MGP_PahariEiJ_G0024474)	Zscan21 (MGP_PahariEiJ_G0024475)	Zfp113 (MGP_PahariEiJ_G0024476)	Cops6 (MGP_PahariEiJ_G0024477)	Mcm7 (MGP_PahariEiJ_G0024478)	Ap4m1 (MGP_PahariEiJ_G0024479)	Taf6 (MGP_PahariEiJ_G0024480)	Cnpy4 (MGP_PahariEiJ_G0024481)	Mblac1 (MGP_PahariEiJ_G0024482)	Nxpe5 (MGP_PahariEiJ_G0024483) ##22	Lamtor4 (MGP_PahariEiJ_G0024484)	Trappc14 (MGP_PahariEiJ_G0024485)	Gal3st4 (MGP_PahariEiJ_G0024486)	MGP_PahariEiJ_G0024487	Gpc2 (MGP_PahariEiJ_G0024488)	Stag3 (MGP_PahariEiJ_G0024489)	Zfp157 (MGP_PahariEiJ_G0024490)	MGP_PahariEiJ_G0024491	A430033K04Rik (MGP_PahariEiJ_G0024492)	Fam20c (MGP_PahariEiJ_G0024493)	Foxl3 (MGP_PahariEiJ_G0024494)	Pdgfa (MGP_PahariEiJ_G0024495)	Prkar1b (MGP_PahariEiJ_G0024496)	Dnaaf5 (MGP_PahariEiJ_G0024497)	Sun1 (MGP_PahariEiJ_G0024498)
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES	3	RGD1562525 (ENSRNOG00000069537)	Vom2r63 (ENSRNOG00000067686)	Vom2r62 (ENSRNOG00000070325)	ENSRNOG00000063102	Vom2r61 (ENSRNOG00000063614)	LOC102546903 (ENSRNOG00000049331)	Pvrig (ENSRNOG00000051906)	Stag3 (ENSRNOG00000001360)	Gpc2 (ENSRNOG00000001367)	Gal3st4 (ENSRNOG00000001375)	Trappc14 (ENSRNOG00000039214)	Lamtor4 (ENSRNOG00000027028)	RGD1562319 (ENSRNOG00000063766) ##22	LOC120095896 (ENSRNOG00000066802) ##22	Nxpe5l1 (ENSRNOG00000069743) ##22	LOC680825 (ENSRNOG00000069278) ##22	Nxpe5 (ENSRNOG00000068266) ##22	Taf6 (ENSRNOG00000001355)	Ap4m1 (ENSRNOG00000001353)	Mcm7 (ENSRNOG00000001349)	Cops6 (ENSRNOG00000001346)	Zfp113 (ENSRNOG00000063927)	Zscan21 (ENSRNOG00000039234)	LOC103691088 (ENSRNOG00000061371)	Zkscan1 (ENSRNOG00000001335)	Azgp1 (ENSRNOG00000001333)	Gjc3 (ENSRNOG00000001329)	Rpl31l4 (ENSRNOG00000039249)	Cyp3a9 (ENSRNOG00000046643)	Vamp7 (ENSRNOG00000008372)	Spry3 (ENSRNOG00000060153)
Rat	MODERN SPECIES	3	Vom2r63 (ENSRNOG00000067686)	Vom2r62 (ENSRNOG00000070325)	ENSRNOG00000063102	Vom2r61 (ENSRNOG00000063614)	LOC102546903 (ENSRNOG00000049331)	Pvrig (ENSRNOG00000051906)	Stag3 (ENSRNOG00000001360)	Gpc2 (ENSRNOG00000001367)	Gal3st4 (ENSRNOG00000001375)	Trappc14 (ENSRNOG00000039214)	Lamtor4 (ENSRNOG00000027028)	RGD1562319 (ENSRNOG00000063766) ##22	LOC120095896 (ENSRNOG00000066802) ##22	Nxpe5l1 (ENSRNOG00000069743) ##22	LOC680825 (ENSRNOG00000069278) ##22	Nxpe5 (ENSRNOG00000068266) ##22	Taf6 (ENSRNOG00000001355)	Ap4m1 (ENSRNOG00000001353)	Mcm7 (ENSRNOG00000001349)	Cops6 (ENSRNOG00000001346)	Zfp113 (ENSRNOG00000063927)	Zscan21 (ENSRNOG00000039234)	LOC103691088 (ENSRNOG00000061371)	Zkscan1 (ENSRNOG00000001335)	Azgp1 (ENSRNOG00000001333)	Gjc3 (ENSRNOG00000001329)	Rpl31l4 (ENSRNOG00000039249)	Cyp3a9 (ENSRNOG00000046643)	Vamp7 (ENSRNOG00000008372)	Spry3 (ENSRNOG00000060153)	ENSRNOG00000070660
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES	3	Rpl31l4 (ENSRNOG00000039249)	Gjc3 (ENSRNOG00000001329)	Azgp1 (ENSRNOG00000001333)	Zkscan1 (ENSRNOG00000001335)	LOC103691088 (ENSRNOG00000061371)	Zscan21 (ENSRNOG00000039234)	Zfp113 (ENSRNOG00000063927)	Cops6 (ENSRNOG00000001346)	Mcm7 (ENSRNOG00000001349)	Ap4m1 (ENSRNOG00000001353)	Taf6 (ENSRNOG00000001355)	Nxpe5 (ENSRNOG00000068266) ##22	LOC680825 (ENSRNOG00000069278) ##22	Nxpe5l1 (ENSRNOG00000069743) ##22	LOC120095896 (ENSRNOG00000066802) ##22	RGD1562319 (ENSRNOG00000063766) ##22	Lamtor4 (ENSRNOG00000027028)	Trappc14 (ENSRNOG00000039214)	Gal3st4 (ENSRNOG00000001375)	Gpc2 (ENSRNOG00000001367)	Stag3 (ENSRNOG00000001360)	Pvrig (ENSRNOG00000051906)	LOC102546903 (ENSRNOG00000049331)	Vom2r61 (ENSRNOG00000063614)	ENSRNOG00000063102	Vom2r62 (ENSRNOG00000070325)	Vom2r63 (ENSRNOG00000067686)	RGD1562525 (ENSRNOG00000069537)	LOC102554231 (ENSRNOG00000066614)	ENSRNOG00000063623	LOC120095898 (ENSRNOG00000028965)
Rat	MODERN SPECIES	3	Cyp3a9 (ENSRNOG00000046643)	Rpl31l4 (ENSRNOG00000039249)	Gjc3 (ENSRNOG00000001329)	Azgp1 (ENSRNOG00000001333)	Zkscan1 (ENSRNOG00000001335)	LOC103691088 (ENSRNOG00000061371)	Zscan21 (ENSRNOG00000039234)	Zfp113 (ENSRNOG00000063927)	Cops6 (ENSRNOG00000001346)	Mcm7 (ENSRNOG00000001349)	Ap4m1 (ENSRNOG00000001353)	Taf6 (ENSRNOG00000001355)	Nxpe5 (ENSRNOG00000068266) ##22	LOC680825 (ENSRNOG00000069278) ##22	Nxpe5l1 (ENSRNOG00000069743) ##22	LOC120095896 (ENSRNOG00000066802) ##22	RGD1562319 (ENSRNOG00000063766) ##22	Lamtor4 (ENSRNOG00000027028)	Trappc14 (ENSRNOG00000039214)	Gal3st4 (ENSRNOG00000001375)	Gpc2 (ENSRNOG00000001367)	Stag3 (ENSRNOG00000001360)	Pvrig (ENSRNOG00000051906)	LOC102546903 (ENSRNOG00000049331)	Vom2r61 (ENSRNOG00000063614)	ENSRNOG00000063102	Vom2r62 (ENSRNOG00000070325)	Vom2r63 (ENSRNOG00000067686)	RGD1562525 (ENSRNOG00000069537)	LOC102554231 (ENSRNOG00000066614)	ENSRNOG00000063623
Rat	MODERN SPECIES	3	Vamp7 (ENSRNOG00000008372)	Cyp3a9 (ENSRNOG00000046643)	Rpl31l4 (ENSRNOG00000039249)	Gjc3 (ENSRNOG00000001329)	Azgp1 (ENSRNOG00000001333)	Zkscan1 (ENSRNOG00000001335)	LOC103691088 (ENSRNOG00000061371)	Zscan21 (ENSRNOG00000039234)	Zfp113 (ENSRNOG00000063927)	Cops6 (ENSRNOG00000001346)	Mcm7 (ENSRNOG00000001349)	Ap4m1 (ENSRNOG00000001353)	Taf6 (ENSRNOG00000001355)	Nxpe5 (ENSRNOG00000068266) ##22	LOC680825 (ENSRNOG00000069278) ##22	Nxpe5l1 (ENSRNOG00000069743) ##22	LOC120095896 (ENSRNOG00000066802) ##22	RGD1562319 (ENSRNOG00000063766) ##22	Lamtor4 (ENSRNOG00000027028)	Trappc14 (ENSRNOG00000039214)	Gal3st4 (ENSRNOG00000001375)	Gpc2 (ENSRNOG00000001367)	Stag3 (ENSRNOG00000001360)	Pvrig (ENSRNOG00000051906)	LOC102546903 (ENSRNOG00000049331)	Vom2r61 (ENSRNOG00000063614)	ENSRNOG00000063102	Vom2r62 (ENSRNOG00000070325)	Vom2r63 (ENSRNOG00000067686)	RGD1562525 (ENSRNOG00000069537)	LOC102554231 (ENSRNOG00000066614)
Upper Galilee mountains blind mole rat	MODERN SPECIES	779	Agfg2 (ENSNGAG00000022134)	Nyap1 (ENSNGAG00000020824)	Spacdr (ENSNGAG00000022367)	ENSNGAG00000010352	ENSNGAG00000019954	Ppp1r35 (ENSNGAG00000021631)	Mepce (ENSNGAG00000007098)	Zcwpw1 (ENSNGAG00000023314)	ENSNGAG00000024168	Pvrig (ENSNGAG00000021882)	Stag3 (ENSNGAG00000022380)	Gpc2 (ENSNGAG00000021576)	ENSNGAG00000023615	Trappc14 (ENSNGAG00000018213)	Lamtor4 (ENSNGAG00000022061)	Nxpe5 (ENSNGAG00000010980) ##22	Mblac1 (ENSNGAG00000019862)	Cnpy4 (ENSNGAG00000012631)	ENSNGAG00000021037	Ap4m1 (ENSNGAG00000012964)	ENSNGAG00000018438	Cops6 (ENSNGAG00000020494)	ENSNGAG00000017557
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00940000162113	ENSGT00510000055200
Sciuridae	DUPLICATION
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.m ##22	ENSGT00950000182866.D.d.b.n ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00940000162113
Eurasian red squirrel	MODERN SPECIES	9	ENSSVLG00005024847	AGFG2 (ENSSVLG00005024825)	NYAP1 (ENSSVLG00005024787)	TSC22D4 (ENSSVLG00005024761)	SPACDR (ENSSVLG00005024747)	PPP1R35 (ENSSVLG00005024735)	MEPCE (ENSSVLG00005024712)	ZCWPW1 (ENSSVLG00005024608)	ENSSVLG00005024546	PVRIG (ENSSVLG00005024504)	STAG3 (ENSSVLG00005024134)	GPC2 (ENSSVLG00005024038)	GAL3ST4 (ENSSVLG00005024016)	TRAPPC14 (ENSSVLG00005023989)	LAMTOR4 (ENSSVLG00005023948)	ENSSVLG00005023894 ##22	ENSSVLG00005023834 ##22	MBLAC1 (ENSSVLG00005023812)	CNPY4 (ENSSVLG00005023789)	TAF6 (ENSSVLG00005023767)	AP4M1 (ENSSVLG00005023706)	MCM7 (ENSSVLG00005023639)	COPS6 (ENSSVLG00005023549)	ZNF3 (ENSSVLG00005023493)	ZSCAN21 (ENSSVLG00005023456)	ZKSCAN1 (ENSSVLG00005023421)	AZGP1 (ENSSVLG00005023385)	GJC3 (ENSSVLG00005023365)	OR2AE1 (ENSSVLG00005023354)	ENSSVLG00005023015	ENSSVLG00005022805
Marmotini	ANCESTRAL SPECIES	3	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00940000156204.k.a	ENSGT00950000182866.D.d.b.m ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b.g.a	ENSGT00950000182958.a.b.b.j.a.a.b.a
Marmotini_b	ANCESTRAL SPECIES	1	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00940000156204.k.a	ENSGT00950000182866.D.d.b.m ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a
Squirrel	MODERN SPECIES	143	ENSSTOG00000024947	AGFG2 (ENSSTOG00000007605)	NYAP1 (ENSSTOG00000024074)	TSC22D4 (ENSSTOG00000030762)	SPACDR (ENSSTOG00000007599)	PPP1R35 (ENSSTOG00000007584)	MEPCE (ENSSTOG00000007568)	ZCWPW1 (ENSSTOG00000007532)	ENSSTOG00000028480	STAG3 (ENSSTOG00000011571)	GPC2 (ENSSTOG00000011563)	GAL3ST4 (ENSSTOG00000028837)	TRAPPC14 (ENSSTOG00000011551)	LAMTOR4 (ENSSTOG00000023090)	ENSSTOG00000003856	ENSSTOG00000022093 ##22	MBLAC1 (ENSSTOG00000027830)	CNPY4 (ENSSTOG00000009083)	TAF6 (ENSSTOG00000009063)	AP4M1 (ENSSTOG00000009043)	COPS6 (ENSSTOG00000009004)	MCM7 (ENSSTOG00000009021)	ZNF3 (ENSSTOG00000028734)	ZSCAN21 (ENSSTOG00000021741)	ZKSCAN1 (ENSSTOG00000010173)	AZGP1 (ENSSTOG00000028979)	GJC3 (ENSSTOG00000003928)	ENSSTOG00000024772
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.m ##22	ENSGT00950000182866.D.d.b.n ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00940000162113	ENSGT00510000055200
Marmotini	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.n ##22
Alpin marmot	MODERN SPECIES	28	AGFG2 (ENSMMMG00000012331)	NYAP1 (ENSMMMG00000012342)	TSC22D4 (ENSMMMG00000012366)	SPACDR (ENSMMMG00000012379)	PPP1R35 (ENSMMMG00000012381)	MEPCE (ENSMMMG00000012390)	ZCWPW1 (ENSMMMG00000012393)	ENSMMMG00000012423	PVRIG (ENSMMMG00000012426)	STAG3 (ENSMMMG00000012432)	GPC2 (ENSMMMG00000012481)	GAL3ST4 (ENSMMMG00000012491)	TRAPPC14 (ENSMMMG00000012510)	LAMTOR4 (ENSMMMG00000012523)	ENSMMMG00000012527	ENSMMMG00000012533 ##22	MBLAC1 (ENSMMMG00000012546)	CNPY4 (ENSMMMG00000012551)	TAF6 (ENSMMMG00000012576)	AP4M1 (ENSMMMG00000012605)	MCM7 (ENSMMMG00000012620)	COPS6 (ENSMMMG00000012677)	ENSMMMG00000012691	ZSCAN21 (ENSMMMG00000012715)	ZKSCAN1 (ENSMMMG00000012720)	AZGP1 (ENSMMMG00000012750)	ENSMMMG00000012753	GJC3 (ENSMMMG00000012758)	ENSMMMG00000012765
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.n ##22
Arctic ground squirrel	MODERN SPECIES	574	AGFG2 (ENSUPAG00010017842)	NYAP1 (ENSUPAG00010017895)	TSC22D4 (ENSUPAG00010017932)	SPACDR (ENSUPAG00010017949)	PPP1R35 (ENSUPAG00010017954)	MEPCE (ENSUPAG00010017962)	ZCWPW1 (ENSUPAG00010017970)	ENSUPAG00010018022	PVRIG (ENSUPAG00010018032)	STAG3 (ENSUPAG00010018041)	GPC2 (ENSUPAG00010018098)	GAL3ST4 (ENSUPAG00010018110)	TRAPPC14 (ENSUPAG00010018118)	LAMTOR4 (ENSUPAG00010018134)	ENSUPAG00010018141	ENSUPAG00010018147 ##22	ENSUPAG00010018161	MBLAC1 (ENSUPAG00010018166)	CNPY4 (ENSUPAG00010018168)	TAF6 (ENSUPAG00010018176)	AP4M1 (ENSUPAG00010018188)	MCM7 (ENSUPAG00010018201)	COPS6 (ENSUPAG00010018239)	ENSUPAG00010018249	ZSCAN21 (ENSUPAG00010018261)	ZKSCAN1 (ENSUPAG00010000068)	AZGP1 (ENSUPAG00010000127)	GJC3 (ENSUPAG00010000186)	ENSUPAG00010000200
Eurasian red squirrel	MODERN SPECIES	9	AGFG2 (ENSSVLG00005024825)	NYAP1 (ENSSVLG00005024787)	TSC22D4 (ENSSVLG00005024761)	SPACDR (ENSSVLG00005024747)	PPP1R35 (ENSSVLG00005024735)	MEPCE (ENSSVLG00005024712)	ZCWPW1 (ENSSVLG00005024608)	ENSSVLG00005024546	PVRIG (ENSSVLG00005024504)	STAG3 (ENSSVLG00005024134)	GPC2 (ENSSVLG00005024038)	GAL3ST4 (ENSSVLG00005024016)	TRAPPC14 (ENSSVLG00005023989)	LAMTOR4 (ENSSVLG00005023948)	ENSSVLG00005023894 ##22	ENSSVLG00005023834 ##22	MBLAC1 (ENSSVLG00005023812)	CNPY4 (ENSSVLG00005023789)	TAF6 (ENSSVLG00005023767)	AP4M1 (ENSSVLG00005023706)	MCM7 (ENSSVLG00005023639)	COPS6 (ENSSVLG00005023549)	ZNF3 (ENSSVLG00005023493)	ZSCAN21 (ENSSVLG00005023456)	ZKSCAN1 (ENSSVLG00005023421)	AZGP1 (ENSSVLG00005023385)	GJC3 (ENSSVLG00005023365)	OR2AE1 (ENSSVLG00005023354)	ENSSVLG00005023015	ENSSVLG00005022805	ZSCAN25 (ENSSVLG00005022756)
Hystricomorpha	DUPLICATION
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.p ##22	ENSGT00950000182866.D.d.b.o.a ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00940000162113	ENSGT00510000055200
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000044122	AGFG2 (ENSHGLG00000006498)	ENSHGLG00000039586	ENSHGLG00000037584	ENSHGLG00000046857	ENSHGLG00000034570	MEPCE (ENSHGLG00000011263)	ZCWPW1 (ENSHGLG00000017181)	ENSHGLG00000014766	ENSHGLG00000005648	GPC2 (ENSHGLG00000006382)	GAL3ST4 (ENSHGLG00000041044)	TRAPPC14 (ENSHGLG00000015099)	LAMTOR4 (ENSHGLG00000018876)	ENSHGLG00000042504 ##22	ENSHGLG00000015201 ##22	MBLAC1 (ENSHGLG00000015838)	ENSHGLG00000017543	AP4M1 (ENSHGLG00000015128)	ENSHGLG00000042280	COPS6 (ENSHGLG00000010175)	ENSHGLG00000040209	ZNF3 (ENSHGLG00000044173)	ENSHGLG00000037014	ENSHGLG00000008084	ZKSCAN1 (ENSHGLG00000010269)	AZGP1 (ENSHGLG00000006938)	ENSHGLG00000047387	ENSHGLG00000037553	ENSHGLG00000007453	ENSHGLG00000041870
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.o.b ##22	ENSGT00950000182866.D.d.b.o.a ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00940000162113	ENSGT00510000055200
Guinea pig	MODERN SPECIES	30	FBXO24 (ENSCPOG00000006109)	LRCH4 (ENSCPOG00000006102)	AGFG2 (ENSCPOG00000006298)	NYAP1 (ENSCPOG00000009913)	TSC22D4 (ENSCPOG00000033476)	MEPCE (ENSCPOG00000015225)	PPP1R35 (ENSCPOG00000032452)	ENSCPOG00000015149	PVRIG (ENSCPOG00000023204)	STAG3 (ENSCPOG00000013372)	GPC2 (ENSCPOG00000025274)	ENSCPOG00000025128	TRAPPC14 (ENSCPOG00000023747)	ENSCPOG00000013370	ENSCPOG00000024907 ##22	ENSCPOG00000022298 ##22	MBLAC1 (ENSCPOG00000022377)	CNPY4 (ENSCPOG00000005128)	TAF6 (ENSCPOG00000005116)	AP4M1 (ENSCPOG00000005111)	MCM7 (ENSCPOG00000005107)	COPS6 (ENSCPOG00000022041)	ZNF3 (ENSCPOG00000010860)	ZSCAN21 (ENSCPOG00000015351)	ZKSCAN1 (ENSCPOG00000005770)	AZGP1 (ENSCPOG00000030246)	GJC3 (ENSCPOG00000012551)	ENSCPOG00000022315	ENSCPOG00000020375	ENSCPOG00000012976	ENSCPOG00000024937
Hystricomorpha_b	ANCESTRAL SPECIES	38	ENSGT00390000017455	ENSGT00940000161668	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.o.b ##22	ENSGT00950000182866.D.d.b.o.a ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.b
Long-tailed chinchilla	MODERN SPECIES	280	SAP25 (ENSCLAG00000001506)	AGFG2 (ENSCLAG00000001587)	NYAP1 (ENSCLAG00000002252)	ENSCLAG00000002429	ENSCLAG00000002826	ENSCLAG00000003036	ENSCLAG00000003445	MEPCE (ENSCLAG00000003470)	ZCWPW1 (ENSCLAG00000003676)	STAG3 (ENSCLAG00000004018)	GPC2 (ENSCLAG00000001241)	GAL3ST4 (ENSCLAG00000001387)	TRAPPC14 (ENSCLAG00000002207)	LAMTOR4 (ENSCLAG00000002133)	ENSCLAG00000002337 ##22	ENSCLAG00000001293 ##22	MBLAC1 (ENSCLAG00000001302)	CNPY4 (ENSCLAG00000001339)	TAF6 (ENSCLAG00000001411)	AP4M1 (ENSCLAG00000001567)	MCM7 (ENSCLAG00000002356)	COPS6 (ENSCLAG00000002592)	ZNF3 (ENSCLAG00000003317)	ZSCAN21 (ENSCLAG00000001105)	ZKSCAN1 (ENSCLAG00000001162)	AZGP1 (ENSCLAG00000001347)	GJC3 (ENSCLAG00000001422)	ENSCLAG00000001479	ENSCLAG00000001437
Degu	MODERN SPECIES	76	PCOLCE (ENSODEG00000016650)	FBXO24 (ENSODEG00000016232)	LRCH4 (ENSODEG00000017054)	AGFG2 (ENSODEG00000016582)	NYAP1 (ENSODEG00000016669)	TSC22D4 (ENSODEG00000016398)	PPP1R35 (ENSODEG00000017251)	MEPCE (ENSODEG00000016662)	ENSODEG00000016818	STAG3 (ENSODEG00000017407)	GPC2 (ENSODEG00000016920)	GAL3ST4 (ENSODEG00000017731)	TRAPPC14 (ENSODEG00000016953)	ENSODEG00000016725	ENSODEG00000016889	ENSODEG00000016612 ##22	MBLAC1 (ENSODEG00000020533)	CNPY4 (ENSODEG00000016875)	TAF6 (ENSODEG00000016755)	AP4M1 (ENSODEG00000016717)	ENSODEG00000016551	ENSODEG00000017079	COPS6 (ENSODEG00000016873)	ZNF3 (ENSODEG00000016822)	ENSODEG00000020419	ZSCAN21 (ENSODEG00000017115)	ZKSCAN1 (ENSODEG00000016790)	AZGP1 (ENSODEG00000016741)	GJC3 (ENSODEG00000016841)	ENSODEG00000016804
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.o.b ##22
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00940000161668	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.o.b ##22	ENSGT00950000182866.D.d.b.o.a ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00940000162113
Hystricomorpha_b	ANCESTRAL SPECIES	38	ENSGT00940000159264	ENSGT00390000017455	ENSGT00940000161668	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.o.b ##22	ENSGT00950000182866.D.d.b.o.a ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.b
Long-tailed chinchilla	MODERN SPECIES	280	LRCH4 (ENSCLAG00000001389)	SAP25 (ENSCLAG00000001506)	AGFG2 (ENSCLAG00000001587)	NYAP1 (ENSCLAG00000002252)	ENSCLAG00000002429	ENSCLAG00000002826	ENSCLAG00000003036	ENSCLAG00000003445	MEPCE (ENSCLAG00000003470)	ZCWPW1 (ENSCLAG00000003676)	STAG3 (ENSCLAG00000004018)	GPC2 (ENSCLAG00000001241)	GAL3ST4 (ENSCLAG00000001387)	TRAPPC14 (ENSCLAG00000002207)	LAMTOR4 (ENSCLAG00000002133)	ENSCLAG00000002337 ##22	ENSCLAG00000001293 ##22	MBLAC1 (ENSCLAG00000001302)	CNPY4 (ENSCLAG00000001339)	TAF6 (ENSCLAG00000001411)	AP4M1 (ENSCLAG00000001567)	MCM7 (ENSCLAG00000002356)	COPS6 (ENSCLAG00000002592)	ZNF3 (ENSCLAG00000003317)	ZSCAN21 (ENSCLAG00000001105)	ZKSCAN1 (ENSCLAG00000001162)	AZGP1 (ENSCLAG00000001347)	GJC3 (ENSCLAG00000001422)	ENSCLAG00000001479	ENSCLAG00000001437
Guinea pig	MODERN SPECIES	30	PCOLCE (ENSCPOG00000025385)	FBXO24 (ENSCPOG00000006109)	LRCH4 (ENSCPOG00000006102)	AGFG2 (ENSCPOG00000006298)	NYAP1 (ENSCPOG00000009913)	TSC22D4 (ENSCPOG00000033476)	MEPCE (ENSCPOG00000015225)	PPP1R35 (ENSCPOG00000032452)	ENSCPOG00000015149	PVRIG (ENSCPOG00000023204)	STAG3 (ENSCPOG00000013372)	GPC2 (ENSCPOG00000025274)	ENSCPOG00000025128	TRAPPC14 (ENSCPOG00000023747)	ENSCPOG00000013370	ENSCPOG00000024907 ##22	ENSCPOG00000022298 ##22	MBLAC1 (ENSCPOG00000022377)	CNPY4 (ENSCPOG00000005128)	TAF6 (ENSCPOG00000005116)	AP4M1 (ENSCPOG00000005111)	MCM7 (ENSCPOG00000005107)	COPS6 (ENSCPOG00000022041)	ZNF3 (ENSCPOG00000010860)	ZSCAN21 (ENSCPOG00000015351)	ZKSCAN1 (ENSCPOG00000005770)	AZGP1 (ENSCPOG00000030246)	GJC3 (ENSCPOG00000012551)	ENSCPOG00000022315	ENSCPOG00000020375	ENSCPOG00000012976
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT01030000235136	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.p ##22	ENSGT00950000182866.D.d.b.o.a ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00950000182958.a.b.b.j.a.a.b	ENSGT00950000182958.a.b.b.j.a.a.a.a	ENSGT00940000162113
Naked mole-rat female	MODERN SPECIES		ENSHGLG00000044649	ENSHGLG00000044122	AGFG2 (ENSHGLG00000006498)	ENSHGLG00000039586	ENSHGLG00000037584	ENSHGLG00000046857	ENSHGLG00000034570	MEPCE (ENSHGLG00000011263)	ZCWPW1 (ENSHGLG00000017181)	ENSHGLG00000014766	ENSHGLG00000005648	GPC2 (ENSHGLG00000006382)	GAL3ST4 (ENSHGLG00000041044)	TRAPPC14 (ENSHGLG00000015099)	LAMTOR4 (ENSHGLG00000018876)	ENSHGLG00000042504 ##22	ENSHGLG00000015201 ##22	MBLAC1 (ENSHGLG00000015838)	ENSHGLG00000017543	AP4M1 (ENSHGLG00000015128)	ENSHGLG00000042280	COPS6 (ENSHGLG00000010175)	ENSHGLG00000040209	ZNF3 (ENSHGLG00000044173)	ENSHGLG00000037014	ENSHGLG00000008084	ZKSCAN1 (ENSHGLG00000010269)	AZGP1 (ENSHGLG00000006938)	ENSHGLG00000047387	ENSHGLG00000037553	ENSHGLG00000007453
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j	ENSGT00940000162113
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Hedgehog	MODERN SPECIES	3493																ENSEEUG00000007369 ##22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j	ENSGT00940000165702
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a	ENSGT00940000165702
Suina	ANCESTRAL SPECIES	31	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00960000187165	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000183069.a.a
Chacoan peccary	MODERN SPECIES	893	SAP25 (ENSCWAG00000012578)	ENSCWAG00000012691	AGFG2 (ENSCWAG00000012748)	NYAP1 (ENSCWAG00000012819)	TSC22D4 (ENSCWAG00000012932)	PPP1R35 (ENSCWAG00000013014)	MEPCE (ENSCWAG00000013070)	ZCWPW1 (ENSCWAG00000013132)	ENSCWAG00000013409	PVRIG (ENSCWAG00000013707)	STAG3 (ENSCWAG00000013814)	GPC2 (ENSCWAG00000014643)	GAL3ST4 (ENSCWAG00000014748)	ENSCWAG00000014790	TRAPPC14 (ENSCWAG00000014926)	ENSCWAG00000015094 ##22	MBLAC1 (ENSCWAG00000015138)	CNPY4 (ENSCWAG00000015151)	TAF6 (ENSCWAG00000015179)	AP4M1 (ENSCWAG00000015217)	MCM7 (ENSCWAG00000015272)	COPS6 (ENSCWAG00000015437)	ZNF3 (ENSCWAG00000015506)	ZSCAN21 (ENSCWAG00000015557)	ZKSCAN1 (ENSCWAG00000015596)	AZGP1 (ENSCWAG00000015641)	GJC3 (ENSCWAG00000015698)	TRIM4 (ENSCWAG00000015714)	OR2AE1 (ENSCWAG00000015760)
Pig	MODERN SPECIES	11	ENSSSCG00000007665	AGFG2 (ENSSSCG00000007664)	NYAP1 (ENSSSCG00000030337)	TSC22D4 (ENSSSCG00000025164)	SPACDR (ENSSSCG00000062010)	PPP1R35 (ENSSSCG00000007652)	MEPCE (ENSSSCG00000023680)	ZCWPW1 (ENSSSCG00000007659)	ENSSSCG00000026653	PVRIG (ENSSSCG00000007656)	STAG3 (ENSSSCG00000007650)	GPC2 (ENSSSCG00000007649)	GAL3ST4 (ENSSSCG00000007648)	TRAPPC14 (ENSSSCG00000007647)	ENSSSCG00000007646	ENSSSCG00000007645 ##22	ENSSSCG00000007644	ENSSSCG00000025271	MBLAC1 (ENSSSCG00000034092)	CNPY4 (ENSSSCG00000032054)	TAF6 (ENSSSCG00000034153)	AP4M1 (ENSSSCG00000034288)	MCM7 (ENSSSCG00000032180)	COPS6 (ENSSSCG00000034893)	ZNF3 (ENSSSCG00000037215)	ENSSSCG00000021941	ZKSCAN1 (ENSSSCG00000031461)	ENSSSCG00000007642	GJC3 (ENSSSCG00000007636)	TRIM4 (ENSSSCG00000007637)	ENSSSCG00000059096
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a	ENSGT00940000165702
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a	ENSGT00940000165702
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.b	ENSGT00940000165702
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.a
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b
Bos	ANCESTRAL SPECIES	9	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.b.b.b
Cow	MODERN SPECIES	17	IRS3 (ENSBTAG00000046753)	AGFG2 (ENSBTAG00000000713)	NYAP1 (ENSBTAG00000017456)	TSC22D4 (ENSBTAG00000015272)	SPACDR (ENSBTAG00000016765)	PPP1R35 (ENSBTAG00000026243)	MEPCE (ENSBTAG00000016763)	ZCWPW1 (ENSBTAG00000001068)	PILRA (ENSBTAG00000001066)	PVRIG (ENSBTAG00000010521)	STAG3 (ENSBTAG00000010496)	GPC2 (ENSBTAG00000008869)	GAL3ST4 (ENSBTAG00000015017)	TRAPPC14 (ENSBTAG00000015011)	LAMTOR4 (ENSBTAG00000015009)	ENSBTAG00000011470 ##22	ENSBTAG00000052147	CNPY4 (ENSBTAG00000007016)	TAF6 (ENSBTAG00000030966)	AP4M1 (ENSBTAG00000002881)	MCM7 (ENSBTAG00000030965)	COPS6 (ENSBTAG00000002871)	ZNF3 (ENSBTAG00000007012)	ZKSCAN1 (ENSBTAG00000016757)	AZGP1 (ENSBTAG00000026236)	GJC3 (ENSBTAG00000038074)	TRIM4 (ENSBTAG00000050135)	OR2AE1 (ENSBTAG00000009840)	CYP3A28 (ENSBTAG00000049666)	CYP3A74 (ENSBTAG00000052665)	CYP3A76 (ENSBTAG00000053645)
Hybrid Bos Indicus	MODERN SPECIES	17	ENSBIXG00005012664	ENSBIXG00005012741	NYAP1 (ENSBIXG00005012775)	TSC22D4 (ENSBIXG00005012809)	SPACDR (ENSBIXG00005012842)	PPP1R35 (ENSBIXG00005012861)	MEPCE (ENSBIXG00005012909)	ZCWPW1 (ENSBIXG00005012940)	ENSBIXG00005007479	PVRIG (ENSBIXG00005001473)	STAG3 (ENSBIXG00005001502)	GPC2 (ENSBIXG00005013178)	GAL3ST4 (ENSBIXG00005013193)	TRAPPC14 (ENSBIXG00005013230)	LAMTOR4 (ENSBIXG00005013266)	ENSBIXG00005001532 ##22	ENSBIXG00005013286	MBLAC1 (ENSBIXG00005001572)	TAF6 (ENSBIXG00005013340)	AP4M1 (ENSBIXG00005013370)	COPS6 (ENSBIXG00005013426)	ZNF3 (ENSBIXG00005013463)	ZSCAN21 (ENSBIXG00005013481)	ZKSCAN1 (ENSBIXG00005013527)	MCM7 (ENSBIXG00005013643)	AZGP1 (ENSBIXG00005001680)	GJC3 (ENSBIXG00005007449)	TRIM4 (ENSBIXG00005013728)	OR2AE1 (ENSBIXG00005013738)	ENSBIXG00005013966	ENSBIXG00005014091
Bos_a	ANCESTRAL SPECIES	35	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00940000163799	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.a
Domestic yak	MODERN SPECIES	18	AGFG2 (ENSBGRG00000016314)	NYAP1 (ENSBGRG00000016464)	TSC22D4 (ENSBGRG00000016571)	SPACDR (ENSBGRG00000016646)	PPP1R35 (ENSBGRG00000016697)	MEPCE (ENSBGRG00000016739)	ZCWPW1 (ENSBGRG00000016860)	ENSBGRG00000017335	ENSBGRG00000017711	STAG3 (ENSBGRG00000017743)	ENSBGRG00000017880	GPC2 (ENSBGRG00000017945)	GAL3ST4 (ENSBGRG00000018045)	TRAPPC14 (ENSBGRG00000018102)	LAMTOR4 (ENSBGRG00000018274)	ENSBGRG00000018445 ##22	ENSBGRG00000018639	ENSBGRG00000018661	MBLAC1 (ENSBGRG00000018693)	CNPY4 (ENSBGRG00000018717)	TAF6 (ENSBGRG00000018806)	AP4M1 (ENSBGRG00000018946)	ENSBGRG00000019443	MCM7 (ENSBGRG00000019501)	COPS6 (ENSBGRG00000019686)	ZNF3 (ENSBGRG00000019869)	ZSCAN21 (ENSBGRG00000019926)	ZKSCAN1 (ENSBGRG00000019980)	AZGP1 (ENSBGRG00000020033)	GJC3 (ENSBGRG00000020166)	TRIM4 (ENSBGRG00000020221)
Wild yak	MODERN SPECIES	538			AGFG2 (ENSBMUG00000000287)	NYAP1 (ENSBMUG00000000241)	ENSBMUG00000000211	SPACDR (ENSBMUG00000000160)	MEPCE (ENSBMUG00000000070)	ZCWPW1 (ENSBMUG00000024025)	ENSBMUG00000024012	STAG3 (ENSBMUG00000023966)	ENSBMUG00000023857	ENSBMUG00000023844	GAL3ST4 (ENSBMUG00000023833)	TRAPPC14 (ENSBMUG00000023798)	LAMTOR4 (ENSBMUG00000023765)	ENSBMUG00000023737 ##22	ENSBMUG00000023725	MBLAC1 (ENSBMUG00000023714)	CNPY4 (ENSBMUG00000023707)	TAF6 (ENSBMUG00000023696)	AP4M1 (ENSBMUG00000023677)	MCM7 (ENSBMUG00000023654)	COPS6 (ENSBMUG00000023611)	ZNF3 (ENSBMUG00000023602)	ZSCAN21 (ENSBMUG00000023591)	ZKSCAN1 (ENSBMUG00000023567)	AZGP1 (ENSBMUG00000023550)	GJC3 (ENSBMUG00000023542)	TRIM4 (ENSBMUG00000023538)	OR2AE1 (ENSBMUG00000023533)	ENSBMUG00000023477
American bison	MODERN SPECIES	3016	ENSBBBG00000023107	SAP25 (ENSBBBG00000023146)	ENSBBBG00000023155	AGFG2 (ENSBBBG00000000422)	TSC22D4 (ENSBBBG00000000396)	SPACDR (ENSBBBG00000000393)	PPP1R35 (ENSBBBG00000000385)	MEPCE (ENSBBBG00000000368)	ZCWPW1 (ENSBBBG00000000347)	ENSBBBG00000000330	STAG3 (ENSBBBG00000023339)	GPC2 (ENSBBBG00000023357)	GAL3ST4 (ENSBBBG00000008683)	TRAPPC14 (ENSBBBG00000006113)	LAMTOR4 (ENSBBBG00000023389)	ENSBBBG00000023403 ##22
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.b	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.k.a.b.a
Goat	MODERN SPECIES	17	ENSCHIG00000024522	AGFG2 (ENSCHIG00000013363)	NYAP1 (ENSCHIG00000014691)	TSC22D4 (ENSCHIG00000016474)	SPACDR (ENSCHIG00000015818)	PPP1R35 (ENSCHIG00000017928)	MEPCE (ENSCHIG00000008713)	ZCWPW1 (ENSCHIG00000024057)	ENSCHIG00000014207	PVRIG (ENSCHIG00000026650)	STAG3 (ENSCHIG00000022562)	GPC2 (ENSCHIG00000018250)	GAL3ST4 (ENSCHIG00000026123)	TRAPPC14 (ENSCHIG00000021034)	LAMTOR4 (ENSCHIG00000010923)	ENSCHIG00000025990 ##22	MBLAC1 (ENSCHIG00000018917)	CNPY4 (ENSCHIG00000025889)	TAF6 (ENSCHIG00000027219)	AP4M1 (ENSCHIG00000017578)	MCM7 (ENSCHIG00000027136)	COPS6 (ENSCHIG00000013561)	ZNF3 (ENSCHIG00000018249)	ZSCAN21 (ENSCHIG00000018092)	ZKSCAN1 (ENSCHIG00000019498)	AZGP1 (ENSCHIG00000009096)	GJC3 (ENSCHIG00000005791)	TRIM4 (ENSCHIG00000013337)	OR2AE1 (ENSCHIG00000010371)	ENSCHIG00000009100	CYP3A76 (ENSCHIG00000022924)
Rambouillet Sheep	MODERN SPECIES	16	AGFG2 (ENSOARG00020017999)	NYAP1 (ENSOARG00020018129)	TSC22D4 (ENSOARG00020018202)	C7orf61 (ENSOARG00020018280)	PPP1R35 (ENSOARG00020018352)	MEPCE (ENSOARG00020018388)	ZCWPW1 (ENSOARG00020018449)	ENSOARG00020018614	PVRIG (ENSOARG00020018895)	ENSOARG00020018953	STAG3 (ENSOARG00020019015)	GPC2 (ENSOARG00020019612)	GAL3ST4 (ENSOARG00020019716)	TRAPPC14 (ENSOARG00020019755)	LAMTOR4 (ENSOARG00020019892)	ENSOARG00020020032 ##22	ENSOARG00020020081	MBLAC1 (ENSOARG00020020170)	CNPY4 (ENSOARG00020020189)	TAF6 (ENSOARG00020020233)	AP4M1 (ENSOARG00020020434)	MCM7 (ENSOARG00020020563)	COPS6 (ENSOARG00020020732)	ZNF3 (ENSOARG00020020856)	ZSCAN21 (ENSOARG00020020878)	ZKSCAN1 (ENSOARG00020020918)	AZGP1 (ENSOARG00020020969)	GJC3 (ENSOARG00020021018)	TRIM4 (ENSOARG00020021045)	OR2AE1 (ENSOARG00020021194)	ENSOARG00020021224
Siberian musk deer	MODERN SPECIES	1230	ENSMMSG00000012558	AGFG2 (ENSMMSG00000012579)	NYAP1 (ENSMMSG00000012616)	TSC22D4 (ENSMMSG00000012664)	SPACDR (ENSMMSG00000012707)	PPP1R35 (ENSMMSG00000012732)	MEPCE (ENSMMSG00000012759)	ZCWPW1 (ENSMMSG00000012792)	ENSMMSG00000012861	PVRIG (ENSMMSG00000012871)	STAG3 (ENSMMSG00000012895)	GPC2 (ENSMMSG00000013072)	GAL3ST4 (ENSMMSG00000013107)	TRAPPC14 (ENSMMSG00000013123)	LAMTOR4 (ENSMMSG00000013158)	ENSMMSG00000013202 ##22	ENSMMSG00000013246	MBLAC1 (ENSMMSG00000013256)	CNPY4 (ENSMMSG00000013262)	TAF6 (ENSMMSG00000013278)	AP4M1 (ENSMMSG00000013345)	MCM7 (ENSMMSG00000013385)	COPS6 (ENSMMSG00000013456)	ZNF3 (ENSMMSG00000013496)	ZSCAN21 (ENSMMSG00000013516)	ZKSCAN1 (ENSMMSG00000013532)	AZGP1 (ENSMMSG00000013554)	GJC3 (ENSMMSG00000013564)	TRIM4 (ENSMMSG00000013574)	OR2AE1 (ENSMMSG00000013591)	ENSMMSG00000013676
Yarkand deer	MODERN SPECIES	1	ENSCHYG00000019964	AGFG2 (ENSCHYG00000019997)	ENSCHYG00000020288	NYAP1 (ENSCHYG00000020318)	TSC22D4 (ENSCHYG00000020369)	SPACDR (ENSCHYG00000020444)	PPP1R35 (ENSCHYG00000020515)	MEPCE (ENSCHYG00000020573)	ZCWPW1 (ENSCHYG00000020740)	ENSCHYG00000020986	PVRIG (ENSCHYG00000021048)	STAG3 (ENSCHYG00000021135)	GPC2 (ENSCHYG00000021470)	TRAPPC14 (ENSCHYG00000021631)	LAMTOR4 (ENSCHYG00000021789)	ENSCHYG00000021961 ##22	ENSCHYG00000022060	MBLAC1 (ENSCHYG00000009155)	CNPY4 (ENSCHYG00000009178)	TAF6 (ENSCHYG00000009249)	AP4M1 (ENSCHYG00000009537)	MCM7 (ENSCHYG00000010103)	COPS6 (ENSCHYG00000010409)	ZNF3 (ENSCHYG00000010562)	ZSCAN21 (ENSCHYG00000010631)	ZKSCAN1 (ENSCHYG00000010679)	ENSCHYG00000010776	AZGP1 (ENSCHYG00000010798)	GJC3 (ENSCHYG00000010841)	TRIM4 (ENSCHYG00000010879)	OR2AE1 (ENSCHYG00000010965)
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j	ENSGT00940000165702
Carnivora	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b	ENSGT00950000182958.a.b.b.j.i.a
Caniformia	ANCESTRAL SPECIES	8	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b.b	ENSGT00950000182958.a.b.b.j.i.b.a
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b.b	ENSGT00950000182958.a.b.b.j.i.b.a
Ursidae	ANCESTRAL SPECIES	3	ENSGT00390000007899	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b.b
Ursus	ANCESTRAL SPECIES	32	ENSGT00390000007899	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00390000008831.k	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.l	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b.b
American black bear	MODERN SPECIES	8467																ENSUAMG00000005662 ##22	ENSUAMG00000005660
Polar bear	MODERN SPECIES	212	ENSUMAG00000010747	AGFG2 (ENSUMAG00000010741)	NYAP1 (ENSUMAG00000010735)	TSC22D4 (ENSUMAG00000010731)	SPACDR (ENSUMAG00000010728)	PPP1R35 (ENSUMAG00000010726)	MEPCE (ENSUMAG00000010719)	ENSUMAG00000010710	PVRIG (ENSUMAG00000010707)	STAG3 (ENSUMAG00000010678)	ENSUMAG00000010669	ENSUMAG00000010663	GAL3ST4 (ENSUMAG00000010652)	TRAPPC14 (ENSUMAG00000010622)	LAMTOR4 (ENSUMAG00000010613)	ENSUMAG00000010604 ##22	ENSUMAG00000010594	MBLAC1 (ENSUMAG00000010588)	CNPY4 (ENSUMAG00000010584)	TAF6 (ENSUMAG00000010552)	AP4M1 (ENSUMAG00000010444)	MCM7 (ENSUMAG00000010015)	COPS6 (ENSUMAG00000009970)	ZNF3 (ENSUMAG00000009969)	ZSCAN21 (ENSUMAG00000009965)	ZKSCAN1 (ENSUMAG00000009962)	AZGP1 (ENSUMAG00000009958)	GJC3 (ENSUMAG00000009957)	TRIM4 (ENSUMAG00000009953)	OR2AE1 (ENSUMAG00000009952)	ENSUMAG00000009839
Giant Panda	MODERN SPECIES	1	FBXO24 (ENSAMEG00000014922)	LRCH4 (ENSAMEG00000014941)	SAP25 (ENSAMEG00000014992)	ENSAMEG00000014994	AGFG2 (ENSAMEG00000014995)	NYAP1 (ENSAMEG00000015016)	TSC22D4 (ENSAMEG00000024092)	ENSAMEG00000015035	ENSAMEG00000015049	ENSAMEG00000015075	STAG3 (ENSAMEG00000015079)	GPC2 (ENSAMEG00000015203)	GAL3ST4 (ENSAMEG00000015219)	TRAPPC14 (ENSAMEG00000014983)	LAMTOR4 (ENSAMEG00000015227)	ENSAMEG00000015233 ##22	ENSAMEG00000015070	MBLAC1 (ENSAMEG00000019313)	CNPY4 (ENSAMEG00000011070)	TAF6 (ENSAMEG00000011082)	AP4M1 (ENSAMEG00000011117)	ENSAMEG00000011150	COPS6 (ENSAMEG00000011206)	ENSAMEG00000011233	ENSAMEG00000011241	ENSAMEG00000011243	ENSAMEG00000011252	ENSAMEG00000019483	ENSAMEG00000031466	ENSAMEG00000004376	ZSCAN25 (ENSAMEG00000028606)
Mustelinae	ANCESTRAL SPECIES	41	ENSGT00390000007899	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b.b	ENSGT00950000182958.a.b.b.j.i.b.a
Ferret	MODERN SPECIES	243	LRCH4 (ENSMPUG00000015685)	ENSMPUG00000015683	SAP25 (ENSMPUG00000015682)	AGFG2 (ENSMPUG00000015680)	NYAP1 (ENSMPUG00000015679)	TSC22D4 (ENSMPUG00000015678)	PPP1R35 (ENSMPUG00000015677)	MEPCE (ENSMPUG00000015673)	ZCWPW1 (ENSMPUG00000015671)	ENSMPUG00000015670	PVRIG (ENSMPUG00000015669)	STAG3 (ENSMPUG00000015668)	GPC2 (ENSMPUG00000015640)	GAL3ST4 (ENSMPUG00000015638)	LAMTOR4 (ENSMPUG00000015634)	ENSMPUG00000015624 ##22	ENSMPUG00000015623
American mink	MODERN SPECIES	102	AGFG2 (ENSNVIG00000000961)	NYAP1 (ENSNVIG00000000942)	TSC22D4 (ENSNVIG00000000933)	PPP1R35 (ENSNVIG00000000929)	MEPCE (ENSNVIG00000000913)	ZCWPW1 (ENSNVIG00000000812)	ENSNVIG00000000768	ENSNVIG00000000757	PVRIG (ENSNVIG00000000743)	STAG3 (ENSNVIG00000000537)	ENSNVIG00000000527	ENSNVIG00000000522	GAL3ST4 (ENSNVIG00000000509)	TRAPPC14 (ENSNVIG00000000488)	LAMTOR4 (ENSNVIG00000000476)	ENSNVIG00000000455 ##22	MBLAC1 (ENSNVIG00000000446)	CNPY4 (ENSNVIG00000000435)	TAF6 (ENSNVIG00000000309)	AP4M1 (ENSNVIG00000000228)	MCM7 (ENSNVIG00000000161)	COPS6 (ENSNVIG00000000137)	ZNF3 (ENSNVIG00000000097)	ZSCAN21 (ENSNVIG00000000082)	ZKSCAN1 (ENSNVIG00000000053)	AZGP1 (ENSNVIG00000000047)	GJC3 (ENSNVIG00000000046)	TRIM4 (ENSNVIG00000000033)	ENSNVIG00000022670	ENSNVIG00000022662	ENSNVIG00000022658
Canidae	ANCESTRAL SPECIES	3	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.p	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.o	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330.b	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.i.b.a.d
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00390000007899	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.p	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.o	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a.a	ENSGT00940000163330.a	ENSGT01090000260018.B.b.o	ENSGT00950000182958.a.b.b.j.i.b.a.d
Dingo	MODERN SPECIES	351	AGFG2 (ENSCAFG00020013987)	NYAP1 (ENSCAFG00020014003)	TSC22D4 (ENSCAFG00020014009)	SPACDR (ENSCAFG00020014011)	PPP1R35 (ENSCAFG00020014015)	MEPCE (ENSCAFG00020014018)	ZCWPW1 (ENSCAFG00020014025)	ENSCAFG00020014050	PVRIG (ENSCAFG00020014054)	STAG3 (ENSCAFG00020014060)	ENSCAFG00020014083	ENSCAFG00020014089	GAL3ST4 (ENSCAFG00020014096)	TRAPPC14 (ENSCAFG00020014099)	ENSCAFG00020014105	ENSCAFG00020014108 ##22	ENSCAFG00020014111	MBLAC1 (ENSCAFG00020014116)	CNPY4 (ENSCAFG00020014119)	TAF6 (ENSCAFG00020014123)	AP4M1 (ENSCAFG00020014130)	MCM7 (ENSCAFG00020014136)	COPS6 (ENSCAFG00020014156)	ZNF3 (ENSCAFG00020014270)	ZSCAN21 (ENSCAFG00020014273)	ZKSCAN1 (ENSCAFG00020014275)	AZGP1 (ENSCAFG00020014282)	GJC3 (ENSCAFG00020014284)	TRIM4 (ENSCAFG00020014286)	OR2AE1 (ENSCAFG00020014287)	ENSCAFG00020014292
Red fox	MODERN SPECIES	164	ENSVVUG00000023438	ENSVVUG00000023437	AGFG2 (ENSVVUG00000023431)	NYAP1 (ENSVVUG00000023428)	TSC22D4 (ENSVVUG00000023425)	PPP1R35 (ENSVVUG00000023420)	MEPCE (ENSVVUG00000023418)	ZCWPW1 (ENSVVUG00000023416)	ENSVVUG00000023411	PVRIG (ENSVVUG00000023410)	STAG3 (ENSVVUG00000023385)	GPC2 (ENSVVUG00000023372)	GAL3ST4 (ENSVVUG00000023368)	TRAPPC14 (ENSVVUG00000023364)	ENSVVUG00000023360	ENSVVUG00000023358 ##22	ENSVVUG00000023355	MBLAC1 (ENSVVUG00000023353)	CNPY4 (ENSVVUG00000023343)	TAF6 (ENSVVUG00000023336)	AP4M1 (ENSVVUG00000023330)	MCM7 (ENSVVUG00000023319)	COPS6 (ENSVVUG00000023316)	ZNF3 (ENSVVUG00000023315)	ZSCAN21 (ENSVVUG00000023312)	ZKSCAN1 (ENSVVUG00000023308)	AZGP1 (ENSVVUG00000023299)	GJC3 (ENSVVUG00000023296)	TRIM4 (ENSVVUG00000023285)	OR2AE1 (ENSVVUG00000023280)	ENSVVUG00000023227
Felidae	ANCESTRAL SPECIES	19	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.r	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000008831.q	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b.o	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.j	ENSGT00950000182958.a.b.b.j.i.a.h
Panthera	ANCESTRAL SPECIES	27	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.q	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929.e	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b.o	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.j	ENSGT00950000182958.a.b.b.j.i.a.h
Panthera_a	ANCESTRAL SPECIES	27	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.q	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929.e	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b.o	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01090000260018.B.b	ENSGT00950000182958.a.b.b.j.j	ENSGT00950000182958.a.b.b.j.i.a.h
leopard	MODERN SPECIES	91	SAP25 (ENSPPRG00000022993)	ENSPPRG00000000263	AGFG2 (ENSPPRG00000000417)	NYAP1 (ENSPPRG00000001207)	TSC22D4 (ENSPPRG00000001465)	SPACDR (ENSPPRG00000001575)	PPP1R35 (ENSPPRG00000001898)	MEPCE (ENSPPRG00000002350)	ZCWPW1 (ENSPPRG00000004075)	PVRIG (ENSPPRG00000004947)	STAG3 (ENSPPRG00000011185)	GPC2 (ENSPPRG00000011965)	GAL3ST4 (ENSPPRG00000012231)	TRAPPC14 (ENSPPRG00000013321)	LAMTOR4 (ENSPPRG00000015537)	ENSPPRG00000016493 ##22	MBLAC1 (ENSPPRG00000019461)	CNPY4 (ENSPPRG00000017173)	TAF6 (ENSPPRG00000023501)	ENSPPRG00000002459	ENSPPRG00000002694	MCM7 (ENSPPRG00000005906)	COPS6 (ENSPPRG00000006726)	ZNF3 (ENSPPRG00000007170)	ZSCAN21 (ENSPPRG00000007444)	ZKSCAN1 (ENSPPRG00000008519)	AZGP1 (ENSPPRG00000008844)	GJC3 (ENSPPRG00000019800)	TRIM4 (ENSPPRG00000009044)	OR2AE1 (ENSPPRG00000019851)	ENSPPRG00000010396
lion	MODERN SPECIES	16	ZSCAN21 (ENSPLOG00000021246)	ZNF3 (ENSPLOG00000021226)	COPS6 (ENSPLOG00000021153)	MCM7 (ENSPLOG00000020913)	AP4M1 (ENSPLOG00000020797)	TAF6 (ENSPLOG00000020624)	CNPY4 (ENSPLOG00000020552)	MBLAC1 (ENSPLOG00000020530)	ENSPLOG00000020516	PVRIG (ENSPLOG00000020486)	STAG3 (ENSPLOG00000020019)	GPC2 (ENSPLOG00000019810)	GAL3ST4 (ENSPLOG00000019767)	TRAPPC14 (ENSPLOG00000019666)	LAMTOR4 (ENSPLOG00000019568)	ENSPLOG00000019466 ##22	ZCWPW1 (ENSPLOG00000019294)	MEPCE (ENSPLOG00000019216)	PPP1R35 (ENSPLOG00000019170)	TSC22D4 (ENSPLOG00000019105)	NYAP1 (ENSPLOG00000019016)	AGFG2 (ENSPLOG00000018927)	ENSPLOG00000018875	SAP25 (ENSPLOG00000018690)	LRCH4 (ENSPLOG00000018576)	FBXO24 (ENSPLOG00000018295)	PCOLCE (ENSPLOG00000018092)	MOSPD3 (ENSPLOG00000017973)	TFR2 (ENSPLOG00000017769)	ACTL6B (ENSPLOG00000017604)	GNB2 (ENSPLOG00000017453)
Tiger	MODERN SPECIES	32	FBXO24 (ENSPTIG00000014049)	LRCH4 (ENSPTIG00000014734)	ENSPTIG00000015108	AGFG2 (ENSPTIG00000015361)	NYAP1 (ENSPTIG00000015607)	TSC22D4 (ENSPTIG00000015782)	SPACDR (ENSPTIG00000016019)	ENSPTIG00000016100	ZCWPW1 (ENSPTIG00000016293)	PVRIG (ENSPTIG00000017352)	STAG3 (ENSPTIG00000017542)	GPC2 (ENSPTIG00000018544)	GAL3ST4 (ENSPTIG00000019146)	TRAPPC14 (ENSPTIG00000019397)	ENSPTIG00000019703	ENSPTIG00000000328 ##22	MBLAC1 (ENSPTIG00000006230)	CNPY4 (ENSPTIG00000001893)	TAF6 (ENSPTIG00000002884)	AP4M1 (ENSPTIG00000005703)	MCM7 (ENSPTIG00000006920)	COPS6 (ENSPTIG00000007612)	ZNF3 (ENSPTIG00000008487)	ZSCAN21 (ENSPTIG00000008916)	ZKSCAN1 (ENSPTIG00000009494)	AZGP1 (ENSPTIG00000009587)	GJC3 (ENSPTIG00000006290)	TRIM4 (ENSPTIG00000009937)	OR2AE1 (ENSPTIG00000006320)
Cat	MODERN SPECIES	247	LRCH4 (ENSFCAG00000000219)	IRS3 (ENSFCAG00000026820)	AGFG2 (ENSFCAG00000006841)	NYAP1 (ENSFCAG00000010806)	TSC22D4 (ENSFCAG00000010805)	PPP1R35 (ENSFCAG00000043281)	MEPCE (ENSFCAG00000010803)	ZCWPW1 (ENSFCAG00000010802)	ENSFCAG00000038978	PVRIG (ENSFCAG00000022272)	STAG3 (ENSFCAG00000010798)	GPC2 (ENSFCAG00000010794)	GAL3ST4 (ENSFCAG00000031130)	TRAPPC14 (ENSFCAG00000007873)	LAMTOR4 (ENSFCAG00000026703)	ENSFCAG00000028174 ##22	ENSFCAG00000049267	MBLAC1 (ENSFCAG00000042542)	CNPY4 (ENSFCAG00000003566)	TAF6 (ENSFCAG00000003564)	AP4M1 (ENSFCAG00000026277)	MCM7 (ENSFCAG00000003562)	ENSFCAG00000003561	ZNF3 (ENSFCAG00000003560)	ZSCAN21 (ENSFCAG00000029089)	ZKSCAN1 (ENSFCAG00000042679)	GJC3 (ENSFCAG00000015012)	TRIM4 (ENSFCAG00000025749)	ENSFCAG00000023135	CYP3A132 (ENSFCAG00000040455)	CYP3A131 (ENSFCAG00000046713)
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT00950000182958.a.b.b.j.h.a	ENSGT00940000165702	ENSGT00940000162113
Equus	DUPLICATION
Equus	ANCESTRAL SPECIES	22	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.u.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.q ##22	ENSGT00950000182866.D.d.b.r ##22	ENSGT00390000008831.u.b	ENSGT00390000008831.v	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT01050000245239.e.a	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a
Donkey	MODERN SPECIES	5	ENSEASG00005017040	ENSEASG00005017041	AGFG2 (ENSEASG00005017044)	NYAP1 (ENSEASG00005017050)	TSC22D4 (ENSEASG00005017059)	PPP1R35 (ENSEASG00005031042)	MEPCE (ENSEASG00005017074)	ZCWPW1 (ENSEASG00005017081)	ENSEASG00005017091	ENSEASG00005017094	STAG3 (ENSEASG00005017210)	GPC2 (ENSEASG00005030894)	GAL3ST4 (ENSEASG00005018926)	LAMTOR4 (ENSEASG00005027179)	TRAPPC14 (ENSEASG00005018927)	ENSEASG00005028702 ##22	ENSEASG00005018932	ENSEASG00005018935	MBLAC1 (ENSEASG00005036677)	CNPY4 (ENSEASG00005018940)	TAF6 (ENSEASG00005018943)	AP4M1 (ENSEASG00005018948)	MCM7 (ENSEASG00005018953)	COPS6 (ENSEASG00005018961)	ZNF3 (ENSEASG00005024752)	ENSEASG00005028758	ENSEASG00005018972	ZKSCAN1 (ENSEASG00005018973)	ENSEASG00005018976	ENSEASG00005018980	ENSEASG00005018981
Horse	MODERN SPECIES	4	LRCH4 (ENSECAG00000023227)	SAP25 (ENSECAG00000023213)	IRS3 (ENSECAG00000022553)	AGFG2 (ENSECAG00000016244)	NYAP1 (ENSECAG00000012983)	TSC22D4 (ENSECAG00000008387)	SPACDR (ENSECAG00000052769)	MEPCE (ENSECAG00000024124)	ZCWPW1 (ENSECAG00000022363)	ENSECAG00000033857	PVRIG (ENSECAG00000020068)	STAG3 (ENSECAG00000012736)	GPC2 (ENSECAG00000008170)	TRAPPC14 (ENSECAG00000035321)	ENSECAG00000006312	ENSECAG00000034468 ##22	ENSECAG00000052107 ##22	ENSECAG00000032598	ENSECAG00000049215	ENSECAG00000021110	MBLAC1 (ENSECAG00000046596)	CNPY4 (ENSECAG00000057972)	TAF6 (ENSECAG00000008522)	AP4M1 (ENSECAG00000016103)	MCM7 (ENSECAG00000015149)	COPS6 (ENSECAG00000008997)	ZNF3 (ENSECAG00000024649)	ENSECAG00000034869	ENSECAG00000029765	ENSECAG00000030390	ZSCAN21 (ENSECAG00000054193)
Equus	ANCESTRAL SPECIES	22	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831.u.a	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b.q ##22	ENSGT00950000182866.D.d.b.r ##22	ENSGT00390000008831.u.b	ENSGT00390000008831.v	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT01050000245239.e.a	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330
Horse	MODERN SPECIES	4	SAP25 (ENSECAG00000023213)	IRS3 (ENSECAG00000022553)	AGFG2 (ENSECAG00000016244)	NYAP1 (ENSECAG00000012983)	TSC22D4 (ENSECAG00000008387)	SPACDR (ENSECAG00000052769)	MEPCE (ENSECAG00000024124)	ZCWPW1 (ENSECAG00000022363)	ENSECAG00000033857	PVRIG (ENSECAG00000020068)	STAG3 (ENSECAG00000012736)	GPC2 (ENSECAG00000008170)	TRAPPC14 (ENSECAG00000035321)	ENSECAG00000006312	ENSECAG00000034468 ##22	ENSECAG00000052107 ##22	ENSECAG00000032598	ENSECAG00000049215	ENSECAG00000021110	MBLAC1 (ENSECAG00000046596)	CNPY4 (ENSECAG00000057972)	TAF6 (ENSECAG00000008522)	AP4M1 (ENSECAG00000016103)	MCM7 (ENSECAG00000015149)	COPS6 (ENSECAG00000008997)	ZNF3 (ENSECAG00000024649)	ENSECAG00000034869	ENSECAG00000029765	ENSECAG00000030390	ZSCAN21 (ENSECAG00000054193)	ZKSCAN1 (ENSECAG00000030386)
Chiroptera	ANCESTRAL SPECIES	37	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT00950000182958.a.b.b.j.h.a	ENSGT00940000165702	ENSGT00940000162113
Microchiroptera	ANCESTRAL SPECIES	39	ENSGT00940000163992	ENSGT00940000161071	ENSGT00890000139453.a	ENSGT00940000161400	ENSGT00460000041667	ENSGT00390000004198	ENSGT00940000153993.A	ENSGT00560000077278.a	ENSGT00390000008831	ENSGT00390000017799	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00950000182866.D.d.b ##22	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT00950000182958.a.b.b.j.h.a	ENSGT00940000165702	ENSGT00940000162113
Greater horseshoe bat	MODERN SPECIES	25	ENSRFEG00010003589	AGFG2 (ENSRFEG00010003565)	NYAP1 (ENSRFEG00010003530)	TSC22D4 (ENSRFEG00010003495)	PPP1R35 (ENSRFEG00010003455)	MEPCE (ENSRFEG00010003432)	ZCWPW1 (ENSRFEG00010003404)	ENSRFEG00010003372	ENSRFEG00010003343	STAG3 (ENSRFEG00010003326)	GPC2 (ENSRFEG00010003296)	GAL3ST4 (ENSRFEG00010003269)	TRAPPC14 (ENSRFEG00010003238)	LAMTOR4 (ENSRFEG00010003193)	ENSRFEG00010003154	ENSRFEG00010003095 ##22	ENSRFEG00010002984	CNPY4 (ENSRFEG00010002959)	TAF6 (ENSRFEG00010002915)	AP4M1 (ENSRFEG00010002882)	MCM7 (ENSRFEG00010002803)	COPS6 (ENSRFEG00010002750)	ZNF3 (ENSRFEG00010002738)	ZSCAN21 (ENSRFEG00010002722)	ZKSCAN1 (ENSRFEG00010002707)	AZGP1 (ENSRFEG00010002692)	GJC3 (ENSRFEG00010002682)	ENSRFEG00010002670	TRIM4 (ENSRFEG00010002653)	ENSRFEG00010002619	ENSRFEG00010002590
Microbat	DUPLICATION
Microbat	MODERN SPECIES	937	FBXO24 (ENSMLUG00000009958)	LRCH4 (ENSMLUG00000009911)	ENSMLUG00000009823	AGFG2 (ENSMLUG00000009758)	NYAP1 (ENSMLUG00000009744)	TSC22D4 (ENSMLUG00000009729)	ENSMLUG00000030019	ENSMLUG00000009706	MEPCE (ENSMLUG00000009678)	ZCWPW1 (ENSMLUG00000009644)	STAG3 (ENSMLUG00000017433)	GPC2 (ENSMLUG00000017431)	GAL3ST4 (ENSMLUG00000028836)	TRAPPC14 (ENSMLUG00000017428)	LAMTOR4 (ENSMLUG00000017427)	ENSMLUG00000030457 ##22	ENSMLUG00000022938 ##22	ENSMLUG00000029521	ENSMLUG00000005690	MBLAC1 (ENSMLUG00000026709)	CNPY4 (ENSMLUG00000016733)	ENSMLUG00000014161	AP4M1 (ENSMLUG00000014158)	MCM7 (ENSMLUG00000014145)	COPS6 (ENSMLUG00000014139)	ZNF3 (ENSMLUG00000004466)	ENSMLUG00000014154	ENSMLUG00000014153	ENSMLUG00000026717	ENSMLUG00000029391	GJC3 (ENSMLUG00000002012)
Microbat	MODERN SPECIES	937	LRCH4 (ENSMLUG00000009911)	ENSMLUG00000009823	AGFG2 (ENSMLUG00000009758)	NYAP1 (ENSMLUG00000009744)	TSC22D4 (ENSMLUG00000009729)	ENSMLUG00000030019	ENSMLUG00000009706	MEPCE (ENSMLUG00000009678)	ZCWPW1 (ENSMLUG00000009644)	STAG3 (ENSMLUG00000017433)	GPC2 (ENSMLUG00000017431)	GAL3ST4 (ENSMLUG00000028836)	TRAPPC14 (ENSMLUG00000017428)	LAMTOR4 (ENSMLUG00000017427)	ENSMLUG00000030457 ##22	ENSMLUG00000022938 ##22	ENSMLUG00000029521	ENSMLUG00000005690	MBLAC1 (ENSMLUG00000026709)	CNPY4 (ENSMLUG00000016733)	ENSMLUG00000014161	AP4M1 (ENSMLUG00000014158)	MCM7 (ENSMLUG00000014145)	COPS6 (ENSMLUG00000014139)	ZNF3 (ENSMLUG00000004466)	ENSMLUG00000014154	ENSMLUG00000014153	ENSMLUG00000026717	ENSMLUG00000029391	GJC3 (ENSMLUG00000002012)	TRIM4 (ENSMLUG00000001995)
Anura	DUPLICATION
Anura	DUPLICATION
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.u.a.a ##22
Frog	DUPLICATION
Frog	DUPLICATION
Frog	MODERN SPECIES	6	bop1 (ENSXETG00000041567)	hsf1 (ENSXETG00000005693)	ENSXETG00000044375	ENSXETG00000042409	cfap20 (ENSXETG00000045005)	ENSXETG00000034824	tonsl (ENSXETG00000020475)	foxh1 (ENSXETG00000020879)	ppp1r16a (ENSXETG00000011619)	gpt (ENSXETG00000007140)	oplah (ENSXETG00000007139)	ENSXETG00000044250	ENSXETG00000042265	adgre2 (ENSXETG00000040944)	nxpe3l.2 (ENSXETG00000017103) ##22	ENSXETG00000030993 ##22	nxpe3l.6 (ENSXETG00000004663) ##22	cyc1 (ENSXETG00000036554)	rbck1 (ENSXETG00000035318)	lrrc14 (ENSXETG00000004669)	XB5836481 [provisional:trim7] (ENSXETG00000042278)	exosc4 (ENSXETG00000034963)	XB22062350 [provisional:nat2] (ENSXETG00000039157)	naprt (ENSXETG00000037754)	eef1d (ENSXETG00000004674)	tigd5 (ENSXETG00000037125)	pycr3 (ENSXETG00000040185)	XB5759208 [provisional] (ENSXETG00000036514)	gpaa1 (ENSXETG00000004682)	a4gnt (ENSXETG00000031191)	ENSXETG00000045776
Frog	MODERN SPECIES	6	hsf1 (ENSXETG00000005693)	ENSXETG00000044375	ENSXETG00000042409	cfap20 (ENSXETG00000045005)	ENSXETG00000034824	tonsl (ENSXETG00000020475)	foxh1 (ENSXETG00000020879)	ppp1r16a (ENSXETG00000011619)	gpt (ENSXETG00000007140)	oplah (ENSXETG00000007139)	ENSXETG00000044250	ENSXETG00000042265	adgre2 (ENSXETG00000040944)	nxpe3l.2 (ENSXETG00000017103) ##22	ENSXETG00000030993 ##22	nxpe3l.6 (ENSXETG00000004663) ##22	cyc1 (ENSXETG00000036554)	rbck1 (ENSXETG00000035318)	lrrc14 (ENSXETG00000004669)	XB5836481 [provisional:trim7] (ENSXETG00000042278)	exosc4 (ENSXETG00000034963)	XB22062350 [provisional:nat2] (ENSXETG00000039157)	naprt (ENSXETG00000037754)	eef1d (ENSXETG00000004674)	tigd5 (ENSXETG00000037125)	pycr3 (ENSXETG00000040185)	XB5759208 [provisional] (ENSXETG00000036514)	gpaa1 (ENSXETG00000004682)	a4gnt (ENSXETG00000031191)	ENSXETG00000045776	ENSXETG00000042928
Frog	MODERN SPECIES	6	SCX (ENSXETG00000044658)	bop1 (ENSXETG00000041567)	hsf1 (ENSXETG00000005693)	ENSXETG00000044375	ENSXETG00000042409	cfap20 (ENSXETG00000045005)	ENSXETG00000034824	tonsl (ENSXETG00000020475)	foxh1 (ENSXETG00000020879)	ppp1r16a (ENSXETG00000011619)	gpt (ENSXETG00000007140)	oplah (ENSXETG00000007139)	ENSXETG00000044250	ENSXETG00000042265	adgre2 (ENSXETG00000040944)	nxpe3l.2 (ENSXETG00000017103) ##22	ENSXETG00000030993 ##22	nxpe3l.6 (ENSXETG00000004663) ##22	cyc1 (ENSXETG00000036554)	rbck1 (ENSXETG00000035318)	lrrc14 (ENSXETG00000004669)	XB5836481 [provisional:trim7] (ENSXETG00000042278)	exosc4 (ENSXETG00000034963)	XB22062350 [provisional:nat2] (ENSXETG00000039157)	naprt (ENSXETG00000037754)	eef1d (ENSXETG00000004674)	tigd5 (ENSXETG00000037125)	pycr3 (ENSXETG00000040185)	XB5759208 [provisional] (ENSXETG00000036514)	gpaa1 (ENSXETG00000004682)	a4gnt (ENSXETG00000031191)
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000020892	ENSLLEG00000020872	ENSLLEG00000020645	ENSLLEG00000020619	NRBP2 (ENSLLEG00000020341)	ENSLLEG00000020273	PUF60 (ENSLLEG00000019639)	SCRIB (ENSLLEG00000019136)	ENSLLEG00000019047	ENSLLEG00000019017	ENSLLEG00000018930	ENSLLEG00000018901	ENSLLEG00000018865	ENSLLEG00000018569	ENSLLEG00000018380	ENSLLEG00000018045 ##22	ENSLLEG00000017973	ENSLLEG00000017921	ENSLLEG00000017800	ENSLLEG00000017725	ENSLLEG00000017577	ENSLLEG00000017524	ENSLLEG00000017501	ARHGAP39 (ENSLLEG00000017364)	EEF1D (ENSLLEG00000016965)	ENSLLEG00000016832	ENSLLEG00000016772	ENSLLEG00000016744	ENSLLEG00000016416	ENSLLEG00000016363	LRRC14 (ENSLLEG00000016332)
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.u.a.b ##22
Frog	DUPLICATION
Frog	DUPLICATION
Frog	MODERN SPECIES	3	ENSXETG00000044657	ENSXETG00000044708	ENSXETG00000041535	ENSXETG00000046521	ENSXETG00000047517	ENSXETG00000047342	ENSXETG00000044358	ENSXETG00000045681	ENSXETG00000042622	ENSXETG00000047123	ENSXETG00000043079	ENSXETG00000037209	ENSXETG00000039547	ENSXETG00000026592 ##22	ENSXETG00000036636 ##22	ENSXETG00000044712 ##22	ENSXETG00000046150	ENSXETG00000008351	ENSXETG00000041711	ENSXETG00000039295	ENSXETG00000044516	ENSXETG00000042488	ENSXETG00000026801	ENSXETG00000046858	ENSXETG00000047283	ENSXETG00000045134	ENSXETG00000040518	ENSXETG00000047700	ENSXETG00000040809	zp3 (ENSXETG00000019465)	ENSXETG00000044052
Frog	MODERN SPECIES	3	ENSXETG00000042432	ENSXETG00000044657	ENSXETG00000044708	ENSXETG00000041535	ENSXETG00000046521	ENSXETG00000047517	ENSXETG00000047342	ENSXETG00000044358	ENSXETG00000045681	ENSXETG00000042622	ENSXETG00000047123	ENSXETG00000043079	ENSXETG00000037209	ENSXETG00000039547	ENSXETG00000026592 ##22	ENSXETG00000036636 ##22	ENSXETG00000044712 ##22	ENSXETG00000046150	ENSXETG00000008351	ENSXETG00000041711	ENSXETG00000039295	ENSXETG00000044516	ENSXETG00000042488	ENSXETG00000026801	ENSXETG00000046858	ENSXETG00000047283	ENSXETG00000045134	ENSXETG00000040518	ENSXETG00000047700	ENSXETG00000040809	zp3 (ENSXETG00000019465)
Frog	MODERN SPECIES	3	ENSXETG00000048406	ENSXETG00000042432	ENSXETG00000044657	ENSXETG00000044708	ENSXETG00000041535	ENSXETG00000046521	ENSXETG00000047517	ENSXETG00000047342	ENSXETG00000044358	ENSXETG00000045681	ENSXETG00000042622	ENSXETG00000047123	ENSXETG00000043079	ENSXETG00000037209	ENSXETG00000039547	ENSXETG00000026592 ##22	ENSXETG00000036636 ##22	ENSXETG00000044712 ##22	ENSXETG00000046150	ENSXETG00000008351	ENSXETG00000041711	ENSXETG00000039295	ENSXETG00000044516	ENSXETG00000042488	ENSXETG00000026801	ENSXETG00000046858	ENSXETG00000047283	ENSXETG00000045134	ENSXETG00000040518	ENSXETG00000047700	ENSXETG00000040809
Anura	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.u.b ##22
Frog	MODERN SPECIES		XB5727280 [provisional] (ENSXETG00000013652)	ENSXETG00000047966	lingo3 (ENSXETG00000013654)	oaz1 (ENSXETG00000013655)	ENSXETG00000047391	amh (ENSXETG00000035043)	sf3a2 (ENSXETG00000024943)	plekhj1 (ENSXETG00000048490)	dot1l (ENSXETG00000013658)	ENSXETG00000040168	ap3d1 (ENSXETG00000013663)	mob3a (ENSXETG00000045515)	mknk2 (ENSXETG00000013667)	btbd2 (ENSXETG00000006432)	csnk1g2 (ENSXETG00000006434)	ENSXETG00000006435 ##22	ENSXETG00000047701	ENSXETG00000042402	ankle1 (ENSXETG00000039453)	lage3 (ENSXETG00000035818)	wdr24 (ENSXETG00000006438)	enc1.2 (ENSXETG00000006439)	ENSXETG00000046593	pex11g (ENSXETG00000040850)	b4galt1l (ENSXETG00000039246)	ENSXETG00000043096	lsm4 (ENSXETG00000024933)	pde4c (ENSXETG00000012922)	rab3a (ENSXETG00000038978)	ENSXETG00000044189	ENSXETG00000041211
Anura	ANCESTRAL SPECIES	131											ENSGT00950000183073.a.a.b	ENSGT01050000244824.C	ENSGT00940000159929	ENSGT00950000182972.a.b	ENSGT01050000244897.a.a.a	ENSGT00950000182866.D.d.b.v ##22	ENSGT00950000182923.B.b	ENSGT00390000014725	ENSGT00390000016053	ENSGT00990000213051	ENSGT01030000234590.B.a.a.d	ENSGT01030000234590.B.a.a.c	ENSGT00390000016193	ENSGT00640000091486.b	ENSGT00940000156128.a	ENSGT01030000234582.f.b.g	ENSGT00390000016398	ENSGT00940000165408	ENSGT01070000256738	ENSGT00970000193372.a.b	ENSGT00940000160621
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	275																ENSLLEG00000011882 ##22
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000012653	ENSLLEG00000012635	ENSLLEG00000012606	ENSLLEG00000012587	ENSLLEG00000012548	ENSLLEG00000012486	ENSLLEG00000012471	ENSLLEG00000012454	ENSLLEG00000012435	ENSLLEG00000012403	COPS6 (ENSLLEG00000012169)	MCM7 (ENSLLEG00000011294)	AP4M1 (ENSLLEG00000011053)	ENSLLEG00000010592	ENSLLEG00000010503	ENSLLEG00000010387 ##22	ENSLLEG00000010279	TAF6 (ENSLLEG00000010172)	MBLAC1 (ENSLLEG00000010144)	ENSLLEG00000010094	ENSLLEG00000009762	ENSLLEG00000009662	ENSLLEG00000009557	LAMTOR4 (ENSLLEG00000009384)	ENSLLEG00000009310	ENSLLEG00000009268	TRAPPC14 (ENSLLEG00000009041)	ENSLLEG00000008992	GAL3ST4 (ENSLLEG00000008929)	ENSLLEG00000008897	ENSLLEG00000008823 ##22
Leishan spiny toad	MODERN SPECIES	280																ENSLLEG00000012245 ##22
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000007464	ENSLLEG00000007483	ENSLLEG00000007498	ENSLLEG00000007551	ENSLLEG00000007633	VAMP2 (ENSLLEG00000007780)	ENSLLEG00000007803	ENSLLEG00000007814	PER1 (ENSLLEG00000007826)	ENSLLEG00000007905	ENSLLEG00000007920	ENSLLEG00000007965	ENSLLEG00000008287	ENSLLEG00000008306	ENSLLEG00000008334	ENSLLEG00000008418 ##22	ENSLLEG00000008823 ##22	ENSLLEG00000008897	GAL3ST4 (ENSLLEG00000008929)	ENSLLEG00000008992	TRAPPC14 (ENSLLEG00000009041)	ENSLLEG00000009268	ENSLLEG00000009310	LAMTOR4 (ENSLLEG00000009384)	ENSLLEG00000009557	ENSLLEG00000009662	ENSLLEG00000009762	ENSLLEG00000010094	MBLAC1 (ENSLLEG00000010144)	TAF6 (ENSLLEG00000010172)	ENSLLEG00000010279
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000007483	ENSLLEG00000007498	ENSLLEG00000007551	ENSLLEG00000007633	VAMP2 (ENSLLEG00000007780)	ENSLLEG00000007803	ENSLLEG00000007814	PER1 (ENSLLEG00000007826)	ENSLLEG00000007905	ENSLLEG00000007920	ENSLLEG00000007965	ENSLLEG00000008287	ENSLLEG00000008306	ENSLLEG00000008334	ENSLLEG00000008418 ##22	ENSLLEG00000008823 ##22	ENSLLEG00000008897	GAL3ST4 (ENSLLEG00000008929)	ENSLLEG00000008992	TRAPPC14 (ENSLLEG00000009041)	ENSLLEG00000009268	ENSLLEG00000009310	LAMTOR4 (ENSLLEG00000009384)	ENSLLEG00000009557	ENSLLEG00000009662	ENSLLEG00000009762	ENSLLEG00000010094	MBLAC1 (ENSLLEG00000010144)	TAF6 (ENSLLEG00000010172)	ENSLLEG00000010279	ENSLLEG00000010387 ##22
Frog	MODERN SPECIES	3	ENSXETG00000047344	vamp2 (ENSXETG00000044343)	aurkb (ENSXETG00000009097)	snapc2 (ENSXETG00000043778)	ENSXETG00000045320	sia2 (ENSXETG00000030966)	ENSXETG00000038906	sia1 (ENSXETG00000009100)	sia3 (ENSXETG00000046444)	ENSXETG00000043396	cops6 (ENSXETG00000009101)	mcm7 (ENSXETG00000009104)	ap4m1 (ENSXETG00000009105)	stag3 (ENSXETG00000004001)	gpc2 (ENSXETG00000046948)	ENSXETG00000037425 ##22	gal3st4.2 (ENSXETG00000033044)	gal3st4.1 (ENSXETG00000048441)	trappc14 (ENSXETG00000048365)	lamtor4 (ENSXETG00000043065)	ENSXETG00000043331	XB5722075 [provisional] (ENSXETG00000043055)	XB5845012 [provisional:tm4sf5] (ENSXETG00000033523)	XB5899916 [provisional:tm4sf5] (ENSXETG00000004007)	mblac1 (ENSXETG00000035787)	ENSXETG00000004010	ENSXETG00000043171	taf6 (ENSXETG00000004009)	mogat2.1 (ENSXETG00000004012)	ENSXETG00000038046	mogat3 (ENSXETG00000027293)
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Reedfish	MODERN SPECIES	11	tfr2 (ENSECRG00000007669)	zgc:158659 (ENSECRG00000007639)	mepcea (ENSECRG00000007627)	ENSECRG00000007621	ENSECRG00000007568	ENSECRG00000007547	ENSECRG00000007537	ENSECRG00000007534	NYAP1 (ENSECRG00000007527)	ATP1B2 (ENSECRG00000007514)	gltpd2b (ENSECRG00000007506)	chrne (ENSECRG00000007476)	ENSECRG00000007452	ENSECRG00000007429	ENSECRG00000007408	ENSECRG00000007390 ##22	wrap53 (ENSECRG00000007366)	efnb3b (ENSECRG00000007348)	serpinh2 (ENSECRG00000007339)	ENSECRG00000007331	DNAH2 (ENSECRG00000007256)	KDM6B (ENSECRG00000007204)	tmem88b (ENSECRG00000007190)	tm4sf5 (ENSECRG00000007172)	ENSECRG00000007159	ENSECRG00000007147	PAQR9 (ENSECRG00000007135)	pcolcea (ENSECRG00000007099)	RNF167 (ENSECRG00000007057)	PFN1 (ENSECRG00000007043)	PFN1 (ENSECRG00000007039)
Neopterygii	ANCESTRAL SPECIES	66									ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b	ENSGT00940000170871	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00390000005067	ENSGT00950000183073.a.a.b	ENSGT00950000182866.D.d.b ##22	ENSGT00390000014827	ENSGT00940000158980	ENSGT00940000158370	ENSGT00940000159217	ENSGT00940000159264	ENSGT00940000162334	ENSGT00390000017455	ENSGT00940000166804	ENSGT01030000234590.B.a.b	ENSGT00940000163776.a	ENSGT00940000160414	ENSGT00940000157623	ENSGT00940000173991.a.a	ENSGT00940000167281	ENSGT00940000160323.b
Spotted gar	MODERN SPECIES	658	ENSLOCG00000013258	ENSLOCG00000013260	ENSLOCG00000013263	ENSLOCG00000013266	ENSLOCG00000013268	slx1b (ENSLOCG00000013274)	zgc:112271 (ENSLOCG00000013282)	ENSLOCG00000013285	ENSLOCG00000013288	ENSLOCG00000013292	ENSLOCG00000013293	ENSLOCG00000013298	SLC16A13 (ENSLOCG00000013302)	acap1 (ENSLOCG00000013309)	ENSLOCG00000013321	ENSLOCG00000013327 ##22	TMEM107 (ENSLOCG00000013332)	aurkb (ENSLOCG00000013333)	VAMP2 (ENSLOCG00000013337)	per1a (ENSLOCG00000013344)	pcolcea (ENSLOCG00000013361)	PAQR9 (ENSLOCG00000013367)	FBXO24 (ENSLOCG00000013369)	ENSLOCG00000013372	DNAH2 (ENSLOCG00000013375)	ENSLOCG00000013420	serpinh2 (ENSLOCG00000013424)	efnb3b (ENSLOCG00000013430)	wrap53 (ENSLOCG00000013434)	ENSLOCG00000013437	ENSLOCG00000013441
Osteoglossocephalai	ANCESTRAL SPECIES	330														ENSGT00990000205479	ENSGT00390000003354	ENSGT00950000182866.D.d.b ##22	ENSGT00390000014827	ENSGT00940000158980	ENSGT00940000158370	ENSGT00940000159217	ENSGT00940000159264.f	ENSGT00940000162334	ENSGT00390000017455	ENSGT00940000166804
Osteoglossiformes	ANCESTRAL SPECIES	151											ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b	ENSGT01050000244824.C	ENSGT00390000005067	ENSGT00390000003354	ENSGT00950000182866.D.d.b ##22	ENSGT00390000014827	ENSGT00940000158980	ENSGT00940000158370	ENSGT00940000159217	ENSGT00940000159264.f	ENSGT00940000162334	ENSGT00940000166804	ENSGT00940000176904	ENSGT01030000234590.B.a.b	ENSGT00940000163776.a	ENSGT00940000160414.c	ENSGT00940000157623	ENSGT00940000167281	ENSGT00940000160323.a.a.a	ENSGT00390000010169
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	516														ENSPKIG00000011281 ##22	ENSPKIG00000011273 ##22	ENSPKIG00000011246 ##22	TMEM107 (ENSPKIG00000011204)	aurkb (ENSPKIG00000011146)	per1b (ENSPKIG00000011097)	PAQR9 (ENSPKIG00000011076)	pcolceb (ENSPKIG00000011046)	ENSPKIG00000010946	si:dkey-85k7.7 (ENSPKIG00000010908)	tm4sf5 (ENSPKIG00000010872)
P. kingsleyae	MODERN SPECIES	516																ENSPKIG00000011281 ##22	ENSPKIG00000011273 ##22	ENSPKIG00000011246 ##22	TMEM107 (ENSPKIG00000011204)	aurkb (ENSPKIG00000011146)	per1b (ENSPKIG00000011097)	PAQR9 (ENSPKIG00000011076)	pcolceb (ENSPKIG00000011046)	ENSPKIG00000010946	si:dkey-85k7.7 (ENSPKIG00000010908)	tm4sf5 (ENSPKIG00000010872)
P. kingsleyae	MODERN SPECIES	968																ENSPKIG00000023559 ##22	ENSPKIG00000023579
P. kingsleyae	MODERN SPECIES	516															ENSPKIG00000011281 ##22	ENSPKIG00000011273 ##22	ENSPKIG00000011246 ##22	TMEM107 (ENSPKIG00000011204)	aurkb (ENSPKIG00000011146)	per1b (ENSPKIG00000011097)	PAQR9 (ENSPKIG00000011076)	pcolceb (ENSPKIG00000011046)	ENSPKIG00000010946	si:dkey-85k7.7 (ENSPKIG00000010908)	tm4sf5 (ENSPKIG00000010872)
Asian bonytongue	MODERN SPECIES	4	ENSSFOG00015001757	rnasel2 (ENSSFOG00015001739)	ENSSFOG00015030221	ENSSFOG00015001605	ENSSFOG00015001581	ENSSFOG00015000245	ENSSFOG00015024306	ENSSFOG00015000306	ENSSFOG00015000367	ENSSFOG00015000429	ENSSFOG00015000558	gpc2 (ENSSFOG00015000591)	ENSSFOG00015000645	MCM7 (ENSSFOG00015000141)	ENSSFOG00015000081	ENSSFOG00015000072 ##22	ENSSFOG00015024481	TMEM107 (ENSSFOG00015000069)	aurkb (ENSSFOG00015018843)	VAMP2 (ENSSFOG00015018818)	per1b (ENSSFOG00015018769)	pcolceb (ENSSFOG00015018752)	PAQR9 (ENSSFOG00015018744)	ENSSFOG00015018698	tm4sf5 (ENSSFOG00015018670)	tmem88b (ENSSFOG00015018662)	ENSSFOG00015029204	ENSSFOG00015030855	KDM6B (ENSSFOG00015015793)	DNAH2 (ENSSFOG00015015843)	serpinh2 (ENSSFOG00015028928)
Clupeocephala	ANCESTRAL SPECIES	186				ENSGT00940000162676.a.b	ENSGT01030000234530.b	ENSGT00940000162676.a.a	ENSGT01030000234530.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b	ENSGT01050000244824.C	ENSGT00940000175410	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b ##22	ENSGT00390000014827	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00530000067117	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000161846	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000157037.a.c.a	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477
Euteleosteomorpha	ANCESTRAL SPECIES	9					ENSGT01030000234530.b.b	ENSGT00940000162676.a.a	ENSGT01030000234530.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b	ENSGT01050000244824.C	ENSGT00940000175410	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b ##22	ENSGT01060000248608.b	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00530000067117	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000161846	ENSGT00940000160595.b	ENSGT00940000156986	ENSGT00390000008346	ENSGT00940000159219.b	ENSGT00940000177939	ENSGT00940000157110	ENSGT00940000161360
Protacanthopterygii	ANCESTRAL SPECIES	71						ENSGT00940000155521.a.a	ENSGT00940000157645.f	ENSGT01030000234530.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b	ENSGT01050000244824.C	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b ##22	ENSGT01060000248608.b	ENSGT00940000156198.c.a	ENSGT00530000067117	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00940000156986	ENSGT00390000008346	ENSGT00940000159219.b	ENSGT00940000157110	ENSGT00940000161360	ENSGT00390000014963	ENSGT00940000169825
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	145																ENSELUG00000031422 ##22
Northern pike	MODERN SPECIES	3	PCDH1 (ENSELUG00000021653)	ENSELUG00000021977	ENSELUG00000031779	ENSELUG00000012920	ENSELUG00000033855	ENSELUG00000027222	ENSELUG00000030826	ENSELUG00000034507	ENSELUG00000033077	gpc2 (ENSELUG00000024517)	STAG3 (ENSELUG00000027905)	mcm7 (ENSELUG00000024588)	ENSELUG00000001643	COPS6 (ENSELUG00000001644)	ENSELUG00000001645	ENSELUG00000034579 ##22	ENSELUG00000026093	nkx3-2 (ENSELUG00000018758)	ENSELUG00000028762	HS3ST1 (ENSELUG00000033906)	ENSELUG00000031250	gsr (ENSELUG00000018639)	ENSELUG00000018596	slc30a9 (ENSELUG00000009145)	GRXCR1 (ENSELUG00000027758)	ENSELUG00000025875	atp8a1 (ENSELUG00000010166)	shisa3 (ENSELUG00000010033)	BEND4 (ENSELUG00000010003)	ENSELUG00000009871	ENSELUG00000009903
Northern pike	MODERN SPECIES	6	paxbp1 (ENSELUG00000010656)	SLC7A1 (ENSELUG00000010561)	GBE1 (ENSELUG00000010506)	ENSELUG00000025662	cadm2a (ENSELUG00000010397)	ENSELUG00000010324	cct8 (ENSELUG00000010278)	ENSELUG00000001634	bach1b (ENSELUG00000010195)	GRIK1 (ENSELUG00000010163)	TIAM1 (ENSELUG00000010079)	sod1 (ENSELUG00000009923)	SCAF4 (ENSELUG00000009909)	ENSELUG00000009873	ENSELUG00000009848	ENSELUG00000009836 ##22	ENSELUG00000009820	cfap298 (ENSELUG00000009800)	synj1 (ENSELUG00000009731)	ENSELUG00000009503	ENSELUG00000028080	ENSELUG00000009459	arfip2b (ENSELUG00000009394)	fhdc3 (ENSELUG00000001613)	trim3b (ENSELUG00000009293)	ENSELUG00000009194	ENSELUG00000009224	ENSELUG00000009202	ENSELUG00000009178	ENSELUG00000009157	ENSELUG00000009110
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	2190																ENSGT00950000182866.D.d.b.`b.a ##22	ENSGT01060000248608.b
Salmoninae_a	ANCESTRAL SPECIES	1053																ENSGT00950000182866.D.d.b.`b.a ##22	ENSGT01060000248608.b
Salmo	ANCESTRAL SPECIES	24	ENSGT00940000156835.l.a.b	ENSGT00940000160449	ENSGT00940000161833.b.a	ENSGT00940000161843	ENSGT00530000067117.a	ENSGT00950000182866.D.d.b.`b.b ##22	ENSGT00390000003354.f	ENSGT00950000183073.a.a.b.f.b	ENSGT00390000005067.a	ENSGT01050000244824.C	ENSGT00950000182972.a.b.b	ENSGT01050000244897.a.a.a	ENSGT00940000155353.b	ENSGT01030000234530.a.b.a.a.a.a	ENSGT01030000234530.a.b.a.b.b	ENSGT00950000182866.D.d.b.`b.a ##22	ENSGT01030000234530.a.b.a.b.a.b	ENSGT01030000234530.a.b.a.b.a.a	ENSGT01030000234530.a.a.a.a.b.b	ENSGT01030000234530.a.b.b.b	ENSGT01030000234530.a.b.b.a	ENSGT01030000234530.a.a.a.a.b.a	ENSGT01030000234530.a.a.a.a.a.b	ENSGT00940000157645.f.b	ENSGT01030000234530.a.b.a.a.b	ENSGT01030000234530.a.a.a.b.b.a	ENSGT00940000157645.f.a	ENSGT00940000155521.a.a	ENSGT00530000064262.pc.b.o	ENSGT00530000063652.a.b.f	ENSGT00940000165110.b.c.b.b
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000002578	ENSSSAG00000002590	ENSSSAG00000002765	ENSSSAG00000092040	ENSSSAG00000002600	ENSSSAG00000002609	ENSSSAG00000010613	ENSSSAG00000002617	ENSSSAG00000083945	ENSSSAG00000002635	ENSSSAG00000002657	ENSSSAG00000003171	ENSSSAG00000005407	ENSSSAG00000005511	ENSSSAG00000005735	ENSSSAG00000005741 ##22	ENSSSAG00000104763	NKX3-2 (ENSSSAG00000091968)	rab28 (ENSSSAG00000005777)	HS3ST1 (ENSSSAG00000109723)	ENSSSAG00000005824	ENSSSAG00000005838	ENSSSAG00000117028	slc30a9 (ENSSSAG00000005870)	GRXCR1 (ENSSSAG00000006661)	atp8a1 (ENSSSAG00000006882)	shisa3 (ENSSSAG00000098743)	BEND4 (ENSSSAG00000092370)	ENSSSAG00000042002	sfxn5b (ENSSSAG00000102240)	ENSSSAG00000106924
River trout	MODERN SPECIES	22	HS3ST1 (ENSSTUG00000003474)	RAB28 (ENSSTUG00000003454)	nkx3-2 (ENSSTUG00000003434)	ENSSTUG00000003405	ENSSTUG00000003397 ##22	ENSSTUG00000003393	COPS6 (ENSSTUG00000003356)	ENSSTUG00000003349	mcm7 (ENSSTUG00000003025)	ENSSTUG00000002988	gpc2 (ENSSTUG00000002698)	ENSSTUG00000002632	ENSSTUG00000002580	ENSSTUG00000002568 ##22	ENSSTUG00000002510	ENSSTUG00000002491 ##22	ENSSTUG00000002476	ENSSTUG00000002463	nitr13 (ENSSTUG00000002440)	ENSSTUG00000002435	nitr13 (ENSSTUG00000002421)	ENSSTUG00000002369	ENSSTUG00000002360	ENSSTUG00000002354	rnasel3 (ENSSTUG00000002350)	ENSSTUG00000002339	ENSSTUG00000002331	ENSSTUG00000002324	ENSSTUG00000002318	PCDH1 (ENSSTUG00000002293)	MFAP4 (ENSSTUG00000002284)
Oncorhynchus	ANCESTRAL SPECIES	878																ENSGT00950000182866.D.d.b.`b.a ##22	ENSGT01060000248608.b.f.b.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	46																ENSGT00950000182866.D.d.b.`b.a ##22	ENSGT00530000064449.A.a.i.f.b	ENSGT00390000003354.f	ENSGT00950000183073.a.a.b.f.b	ENSGT00390000005067.a	ENSGT01050000244824.C.e	ENSGT00950000182972.a.b.b	ENSGT01050000244897.a.a.a	ENSGT00940000157645.f.a	ENSGT01030000234530.a.a.a.a.a.a	ENSGT00940000155521.a.a	ENSGT00940000155412.a.a.a.a.d	ENSGT00940000160234.a.a.b.a	ENSGT00940000154615.i.b.f.g	ENSGT00530000064262.pc.b.o	ENSGT00530000063652.a.b.f
Chinook salmon	DUPLICATION
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	13	GPR101 (ENSOTSG00005011834)	ENSOTSG00005010098	rbmx (ENSOTSG00005010042)	ARHGEF6 (ENSOTSG00005009912)	cd40lg (ENSOTSG00005009909)	tmtops3a (ENSOTSG00005009888)	si:dkeyp-11e3.1 (ENSOTSG00005009887)	ENSOTSG00005009886	MAP7D3 (ENSOTSG00005009885)	fhl1a (ENSOTSG00005009883)	slc9a6a (ENSOTSG00005009419)	ENSOTSG00005009410	drp2 (ENSOTSG00005009406)	nkx3-2 (ENSOTSG00005009404)	ENSOTSG00005009402	ENSOTSG00005009400 ##22	ENSOTSG00005009399	ENSOTSG00005009398	COPS6 (ENSOTSG00005009396)	ENSOTSG00005009394	mcm7 (ENSOTSG00005008384)	ENSOTSG00005008377	gpc2 (ENSOTSG00005008362)	rnasel3 (ENSOTSG00005008359)	ENSOTSG00005008357	ENSOTSG00005008347 ##22	ENSOTSG00005008344	ENSOTSG00005008341	ENSOTSG00005008337	ENSOTSG00005008325	ENSOTSG00005008319
Chinook salmon	MODERN SPECIES	13	SLC4A11 (ENSOTSG00005030205)	ENSOTSG00005030329	ENSOTSG00005030331	smyd5 (ENSOTSG00005030336)	sfxn5b (ENSOTSG00005031501)	ENSOTSG00005031502	BEND4 (ENSOTSG00005031503)	shisa3 (ENSOTSG00005031504)	atp8a1 (ENSOTSG00005031508)	GRXCR1 (ENSOTSG00005033583)	slc30a9 (ENSOTSG00005033585)	emx1 (ENSOTSG00005033603)	noto (ENSOTSG00005033604)	nkx3-2 (ENSOTSG00005033605)	ENSOTSG00005033607	ENSOTSG00005033610 ##22	ENSOTSG00005033611	COPS6 (ENSOTSG00005033613)	ENSOTSG00005033614	mcm7 (ENSOTSG00005033622)	ENSOTSG00005034167	gpc2 (ENSOTSG00005034170)	rnasel3 (ENSOTSG00005034217)	ENSOTSG00005034219	ENSOTSG00005034221 ##22	ENSOTSG00005034223	ENSOTSG00005034225	ENSOTSG00005034228	ENSOTSG00005034234	ENSOTSG00005034240	ENSOTSG00005034250
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	13	GRXCR1 (ENSOTSG00005033583)	slc30a9 (ENSOTSG00005033585)	emx1 (ENSOTSG00005033603)	noto (ENSOTSG00005033604)	nkx3-2 (ENSOTSG00005033605)	ENSOTSG00005033607	ENSOTSG00005033610 ##22	ENSOTSG00005033611	COPS6 (ENSOTSG00005033613)	ENSOTSG00005033614	mcm7 (ENSOTSG00005033622)	ENSOTSG00005034167	gpc2 (ENSOTSG00005034170)	rnasel3 (ENSOTSG00005034217)	ENSOTSG00005034219	ENSOTSG00005034221 ##22	ENSOTSG00005034223	ENSOTSG00005034225	ENSOTSG00005034228	ENSOTSG00005034234	ENSOTSG00005034240	ENSOTSG00005034250	rnasel3 (ENSOTSG00005034254)	ENSOTSG00005034255	PCDH1 (ENSOTSG00005034257)	WNT8A (ENSOTSG00005034262)	ENSOTSG00005034265	zgc:194246 (ENSOTSG00005034268)	ENSOTSG00005034269	ENSOTSG00005034272	ENSOTSG00005034279
Chinook salmon	MODERN SPECIES	13	slc9a6a (ENSOTSG00005009419)	ENSOTSG00005009410	drp2 (ENSOTSG00005009406)	nkx3-2 (ENSOTSG00005009404)	ENSOTSG00005009402	ENSOTSG00005009400 ##22	ENSOTSG00005009399	ENSOTSG00005009398	COPS6 (ENSOTSG00005009396)	ENSOTSG00005009394	mcm7 (ENSOTSG00005008384)	ENSOTSG00005008377	gpc2 (ENSOTSG00005008362)	rnasel3 (ENSOTSG00005008359)	ENSOTSG00005008357	ENSOTSG00005008347 ##22	ENSOTSG00005008344	ENSOTSG00005008341	ENSOTSG00005008337	ENSOTSG00005008325	ENSOTSG00005008319	rnasel3 (ENSOTSG00005008318)	ENSOTSG00005008315	ENSOTSG00005008312	ENSOTSG00005008311	ENSOTSG00005008308	ENSOTSG00005008307	ENSOTSG00005004814	ENSOTSG00005004769	prpf19 (ENSOTSG00005004574)	tcirg1b (ENSOTSG00005004491)
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	10	nkx3-2 (ENSOKIG00005010222)	ENSOKIG00005010235	ENSOKIG00005010281	ENSOKIG00005010327	ENSOKIG00005010332 ##22	ENSOKIG00005010337	COPS6 (ENSOKIG00005010343)	ENSOKIG00005010357	ENSOKIG00005010364	mcm7 (ENSOKIG00005010408)	gpc2 (ENSOKIG00005010983)	rnasel3 (ENSOKIG00005011201)	ENSOKIG00005011205	ENSOKIG00005011219	ENSOKIG00005011227	ENSOKIG00005011238 ##22	ENSOKIG00005011244	ENSOKIG00005011253	nitr13 (ENSOKIG00005011266)	ENSOKIG00005011274	ENSOKIG00005011310	ENSOKIG00005011329	PCDH1 (ENSOKIG00005011344)	ENSOKIG00005011367	MFAP4 (ENSOKIG00005011371)	ENSOKIG00005011377	brd8b (ENSOKIG00005011381)	ENSOKIG00005011402	sting1 (ENSOKIG00005011411)	ppp3cb (ENSOKIG00005011430)	ube2d2 (ENSOKIG00005011544)
Coho salmon	MODERN SPECIES	10	ENSOKIG00005033745	BEND4 (ENSOKIG00005005910)	shisa3 (ENSOKIG00005005918)	ATP8A1 (ENSOKIG00005006156)	GRXCR1 (ENSOKIG00005009853)	slc30a9 (ENSOKIG00005009869)	gsr (ENSOKIG00005010012)	ENSOKIG00005010145	ENSOKIG00005010158	HS3ST1 (ENSOKIG00005010176)	RAB28 (ENSOKIG00005010189)	nkx3-2 (ENSOKIG00005010222)	ENSOKIG00005010235	ENSOKIG00005010281	ENSOKIG00005010327	ENSOKIG00005010332 ##22	ENSOKIG00005010337	COPS6 (ENSOKIG00005010343)	ENSOKIG00005010357	ENSOKIG00005010364	mcm7 (ENSOKIG00005010408)	gpc2 (ENSOKIG00005010983)	rnasel3 (ENSOKIG00005011201)	ENSOKIG00005011205	ENSOKIG00005011219	ENSOKIG00005011227	ENSOKIG00005011238 ##22	ENSOKIG00005011244	ENSOKIG00005011253	nitr13 (ENSOKIG00005011266)	ENSOKIG00005011274
Rainbow trout	MODERN SPECIES	5	RAB28 (ENSOMYG00000061686)	NKX3-2 (ENSOMYG00000061493)	ENSOMYG00000035603	ENSOMYG00000066660 ##22	ENSOMYG00000035613	ENSOMYG00000035619	csn6 (ENSOMYG00000035631)	ENSOMYG00000035638	ENSOMYG00000035735	ENSOMYG00000036382	ENSOMYG00000036405	ENSOMYG00000049577	ENSOMYG00000036495	ENSOMYG00000036606	ENSOMYG00000051413	ENSOMYG00000077548 ##22	ENSOMYG00000058518	ENSOMYG00000036630	ENSOMYG00000036645	sirpb2 (ENSOMYG00000036661)	ENSOMYG00000036666	ENSOMYG00000036637	ENSOMYG00000036669	ENSOMYG00000036676	ENSOMYG00000056006	ENSOMYG00000064046	ENSOMYG00000036687	ENSOMYG00000054028	ENSOMYG00000036711	ENSOMYG00000049751	ENSOMYG00000077090
Salmoninae	ANCESTRAL SPECIES	355		ENSGT00940000155521.a.a	ENSGT00940000157645.f.a	ENSGT01030000234530.a.a.a.b.b.a	ENSGT01030000234530.a.b.a.a.b	ENSGT00940000157645.f.b	ENSGT01030000234530.a.a.a.a.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b.b	ENSGT00950000182972.a.b.a	ENSGT01050000244824.C	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b.f.b	ENSGT00390000003354.f	ENSGT00950000182866.D.d.b.`b.b ##22	ENSGT00950000183073.a.a.b.f.a	ENSGT00390000003354.e	ENSGT00940000156198.c.a	ENSGT00530000067117.a	ENSGT00940000161843	ENSGT00940000161833.b.a	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00940000156986	ENSGT00390000008346.f	ENSGT00940000159219.b.d	ENSGT00940000157110.y.a	ENSGT00940000161360.a.a	ENSGT00390000014963.e
Huchen	MODERN SPECIES	6789																ENSHHUG00000003210 ##22
Salmoninae_a	ANCESTRAL SPECIES	18	ENSGT01030000234530.a.a.a.a.a.b	ENSGT01030000234530.a.a.a.a.b	ENSGT01030000234530.a.b.b.a	ENSGT01030000234530.a.b.a.b.a	ENSGT01030000234530.a.b.a.a.a.a	ENSGT01030000234530.a.a.a.b.a	ENSGT01010000225053	ENSGT01030000234530.a.a.a.a.a.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b.b	ENSGT01050000244824.C	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b.f.b	ENSGT00390000003354.f	ENSGT00950000182866.D.d.b.`b.b ##22	ENSGT00950000183073.a.a.b.f.a	ENSGT00390000003354.e	ENSGT00940000161843	ENSGT00940000161833.b.a	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00940000156986	ENSGT00390000008346.f	ENSGT00940000159219.b.d	ENSGT00940000157110.y.a	ENSGT00940000161360.a.a	ENSGT00390000014963.e	ENSGT00940000158783.a.b.p	ENSGT01030000234641.a.a.a.c
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.`b.b ##22
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000027916	BEND4 (ENSOMYG00000027923)	shisa3 (ENSOMYG00000027930)	ATP8A1 (ENSOMYG00000029509)	ENSOMYG00000033986	GRXCR1 (ENSOMYG00000033999)	slc30a9 (ENSOMYG00000034064)	ENSOMYG00000034247	ENSOMYG00000035529	HS3ST1 (ENSOMYG00000035552)	ENSOMYG00000063323	ENSOMYG00000063521	RAB28 (ENSOMYG00000061686)	NKX3-2 (ENSOMYG00000061493)	ENSOMYG00000035603	ENSOMYG00000066660 ##22	ENSOMYG00000035613	ENSOMYG00000035619	csn6 (ENSOMYG00000035631)	ENSOMYG00000035638	ENSOMYG00000035735	ENSOMYG00000036382	ENSOMYG00000036405	ENSOMYG00000049577	ENSOMYG00000036495	ENSOMYG00000036606	ENSOMYG00000051413	ENSOMYG00000077548 ##22	ENSOMYG00000058518	ENSOMYG00000036630	ENSOMYG00000036645
Salmo	ANCESTRAL SPECIES	24	ENSGT01030000234530.a.b.b.a	ENSGT01030000234530.a.b.b.b	ENSGT01030000234530.a.a.a.a.b.b	ENSGT01030000234530.a.b.a.b.a.a	ENSGT01030000234530.a.b.a.b.a.b	ENSGT00950000182866.D.d.b.`b.a ##22	ENSGT01030000234530.a.b.a.b.b	ENSGT01030000234530.a.b.a.a.a.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b.b	ENSGT01050000244824.C	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b.f.b	ENSGT00390000003354.f	ENSGT00950000182866.D.d.b.`b.b ##22	ENSGT00530000067117.a	ENSGT00940000161843	ENSGT00940000161833.b.a	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00940000156986	ENSGT00390000008346.f	ENSGT00940000159219.b.d	ENSGT00940000157110.y.a	ENSGT00940000161360.a.a	ENSGT00390000014963.e	ENSGT00940000158783.a.b.p	ENSGT01030000234641.a.a.a.c	ENSGT00510000047420.j
River trout	MODERN SPECIES	22	ENSSTUG00000002435	nitr13 (ENSSTUG00000002440)	ENSSTUG00000002463	ENSSTUG00000002476	ENSSTUG00000002491 ##22	ENSSTUG00000002510	ENSSTUG00000002568 ##22	ENSSTUG00000002580	ENSSTUG00000002632	gpc2 (ENSSTUG00000002698)	ENSSTUG00000002988	mcm7 (ENSSTUG00000003025)	ENSSTUG00000003349	COPS6 (ENSSTUG00000003356)	ENSSTUG00000003393	ENSSTUG00000003397 ##22	ENSSTUG00000003405	nkx3-2 (ENSSTUG00000003434)	RAB28 (ENSSTUG00000003454)	HS3ST1 (ENSSTUG00000003474)	ENSSTUG00000003491	ENSSTUG00000003507	gsr (ENSSTUG00000003572)	slc30a9 (ENSSTUG00000004494)	GRXCR1 (ENSSTUG00000004619)	ATP8A1 (ENSSTUG00000004799)	shisa3 (ENSSTUG00000010106)	BEND4 (ENSSTUG00000010112)	ENSSTUG00000010127	sfxn5b (ENSSTUG00000010134)	smyd5 (ENSSTUG00000010188)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.ab ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.ab ##22
Salmo	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.ab ##22
River trout	MODERN SPECIES	22	ENSSTUG00000003507	ENSSTUG00000003491	HS3ST1 (ENSSTUG00000003474)	RAB28 (ENSSTUG00000003454)	nkx3-2 (ENSSTUG00000003434)	ENSSTUG00000003405	ENSSTUG00000003397 ##22	ENSSTUG00000003393	COPS6 (ENSSTUG00000003356)	ENSSTUG00000003349	mcm7 (ENSSTUG00000003025)	ENSSTUG00000002988	gpc2 (ENSSTUG00000002698)	ENSSTUG00000002632	ENSSTUG00000002580	ENSSTUG00000002568 ##22	ENSSTUG00000002510	ENSSTUG00000002491 ##22	ENSSTUG00000002476	ENSSTUG00000002463	nitr13 (ENSSTUG00000002440)	ENSSTUG00000002435	nitr13 (ENSSTUG00000002421)	ENSSTUG00000002369	ENSSTUG00000002360	ENSSTUG00000002354	rnasel3 (ENSSTUG00000002350)	ENSSTUG00000002339	ENSSTUG00000002331	ENSSTUG00000002324	ENSSTUG00000002318
Otomorpha	DUPLICATION
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	1015																ENSGT00950000182866.D.d.b.bb.a ##22	ENSGT01060000248608.b
Otophysi	ANCESTRAL SPECIES	823																ENSGT00950000182866.D.d.b.bb.a ##22	ENSGT01060000248608.b
Cyprinoidei	ANCESTRAL SPECIES	4	ENSGT00950000182847.b.b.a.b.h.g.b.a.a.a.b	ENSGT00950000182847.b.b.a.b.h.g.a.a	ENSGT00940000161369.B.b.a.b.e	ENSGT00940000161369.B.b.a.b.f.e.a.a	ENSGT00940000161369.B.b.a.a.a.a.a	ENSGT00950000183120.i.a	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635.e	ENSGT00940000155499.c	ENSGT00610000086058.b.w.a	ENSGT00390000003602	ENSGT00940000163671.a.a.b	ENSGT00940000158173.f	ENSGT00940000155739	ENSGT00950000182866.D.d.b.bb.a ##22	ENSGT00940000155313.g.b	ENSGT01060000248594.e.b.a	ENSGT00530000063860.b.c	ENSGT00390000012235.k	ENSGT00940000154956.sb.a.a.a	ENSGT00940000154956.sb.a.a.b	ENSGT00940000154934.B.eb	ENSGT01050000244827.C.c.a.b	ENSGT00950000183061.a.b.a.a	ENSGT00940000166005	ENSGT00940000165093	ENSGT00940000157257.m	ENSGT00940000161440	ENSGT00940000166189	ENSGT00940000156538.b
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.a.a.a.a ##22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.a.a.a.a ##22
Common carp reference	MODERN SPECIES	25	ENSCCRG00000067926	ENSCCRG00000079579	ENSCCRG00000058449	ENSCCRG00000057372	ENSCCRG00000079494	ENSCCRG00000026104 ##16	ENSCCRG00000064410	ENSCCRG00000073681	ENSCCRG00000013759	ENSCCRG00000028765	aldoab (ENSCCRG00000021052)	zgc:123217 (ENSCCRG00000058182)	eif3c (ENSCCRG00000011155)	zgc:92040 (ENSCCRG00000010725)	tbx6 (ENSCCRG00000056611)	ENSCCRG00000010727 ##22	ENSCCRG00000046140	ENSCCRG00000058688	ENSCCRG00000055747	ENSCCRG00000018946	ENSCCRG00000004395	ENSCCRG00000004308	ENSCCRG00000018026	ENSCCRG00000018053	rac3b (ENSCCRG00000058510)	ENSCCRG00000046929	ENSCCRG00000058466	zdhhc16b (ENSCCRG00000023586)	ubtd1b (ENSCCRG00000068533)	ENSCCRG00000005554	rbp3 (ENSCCRG00000005534)
Goldfish	MODERN SPECIES	3	ENSCARG00000062281	gdf10b (ENSCARG00000062286)	ENSCARG00000062298	rbp3 (ENSCARG00000001948)	ENSCARG00000002019	ubtd1b (ENSCARG00000002192)	FAM20A (ENSCARG00000002251)	ENSCARG00000002475	ENSCARG00000002485	RAC3 (ENSCARG00000002501)	col1a1b (ENSCARG00000002562)	gngt2b (ENSCARG00000002749)	ENSCARG00000002756	lsm12b (ENSCARG00000002763)	ENSCARG00000002824	ENSCARG00000002831 ##22	ENSCARG00000002836	ENSCARG00000002841	cabp5a (ENSCARG00000002849)	zgc:92040 (ENSCARG00000002857)	ENSCARG00000002866	ENSCARG00000002870	zgc:123217 (ENSCARG00000002874)	ENSCARG00000002883	ENSCARG00000002897	ENSCARG00000002918	ENSCARG00000002925	CASKIN2 (ENSCARG00000002953)	st6galnac1.1 (ENSCARG00000003095)	st6galnac1.1 (ENSCARG00000003133)	gip (ENSCARG00000003163)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.a.a.a.b ##22
Goldfish	MODERN SPECIES	6	ENSCARG00000029314	WSCD1 (ENSCARG00000029289)	bcas3 (ENSCARG00000028757)	or30bt1 (ENSCARG00000028730)	ENSCARG00000028726	or30bx1 (ENSCARG00000028722)	hmgb1b (ENSCARG00000028708)	ENSCARG00000028699	b3glcta (ENSCARG00000026964)	FRY (ENSCARG00000024591)	brca2 (ENSCARG00000024322)	ENSCARG00000024078	arfip2a (ENSCARG00000024014)	ENSCARG00000024003	TRIM3 (ENSCARG00000023821)	ENSCARG00000023791 ##22	frem2b (ENSCARG00000023701)	trpc4b (ENSCARG00000023633)	postnb (ENSCARG00000023376)	spartb (ENSCARG00000023295)	dclk1b (ENSCARG00000022927)	mab21l1 (ENSCARG00000022901)	NBEA (ENSCARG00000019012)	ENSCARG00000018151	trmt9b (ENSCARG00000018104)	PDS5B (ENSCARG00000017951)	ENSCARG00000017897	inpp5ka (ENSCARG00000016618)	tekt1 (ENSCARG00000016532)	ENSCARG00000016519	mag (ENSCARG00000016498)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.a.a.b ##22
Goldfish	MODERN SPECIES	49	ENSCARG00000040218	ENSCARG00000040184	ENSCARG00000040160	ENSCARG00000040147	ENSCARG00000040126	ENSCARG00000040102	ENSCARG00000040061	ENSCARG00000040048	ENSCARG00000040020	ENSCARG00000039978	ENSCARG00000039967	ENSCARG00000039946	bzw1b (ENSCARG00000039856)	ENSCARG00000039846	ENSCARG00000039842	ENSCARG00000039827 ##22	MYO1B (ENSCARG00000038854)	C3orf38 (ENSCARG00000038743)	EPHA3 (ENSCARG00000036995)	STX19 (ENSCARG00000036911)	RSPH1 (ENSCARG00000036872)	CLN5 (ENSCARG00000036828)	fbxl3a (ENSCARG00000036805)	ENSCARG00000036363	ENSCARG00000036344	ENSCARG00000036323	slain1a (ENSCARG00000022522)	ENSCARG00000022517	zgc:101559 (ENSCARG00000022511)	rgcc (ENSCARG00000022503)	DGKH (ENSCARG00000021849)
Cyprininae	ANCESTRAL SPECIES	14	ENSGT00940000161369.B.b.a.b.f.e.a.a	ENSGT00940000161369.B.b.a.a.a.a.a	ENSGT00950000183120.i.a.e	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635.e	ENSGT00940000155499.c.b	ENSGT00940000158948.b.t.a.b	ENSGT00610000086058.b.w.a.a	ENSGT00390000003602.e	ENSGT00940000163671.a.a.b.a	ENSGT00950000183040.A.a.c.a.a	ENSGT00940000155128.a.a.a.a.a	ENSGT00940000158173.f.f	ENSGT00940000155739	ENSGT00950000182866.D.d.b.bb.a.b ##22	ENSGT00940000155313.g.b.b	ENSGT01060000248594.e.b.a.f	ENSGT00530000063860.b.c.a	ENSGT00390000012235.k.h	ENSGT00940000154956.sb.a.a.b	ENSGT00940000154934.B.eb.d	ENSGT01050000244827.C.c.a.b	ENSGT00940000154934.B.eb.c	ENSGT00950000183061.a.b.a.a.b	ENSGT00950000183061.a.b.a.a.a	ENSGT00940000166005	ENSGT00940000165093.k	ENSGT00940000157257.m.b	ENSGT00940000161440.d	ENSGT00940000166189
Goldfish	MODERN SPECIES	34	or30bt5 (ENSCARG00000016510)	ENSCARG00000016511	ENSCARG00000016522	hmgb1b (ENSCARG00000016531)	ENSCARG00000016549	HSPH1 (ENSCARG00000016650)	b3glcta (ENSCARG00000018869)	rxfp2b (ENSCARG00000019764)	FRY (ENSCARG00000019886)	ENSCARG00000020470	ENSCARG00000020772	arfip2a (ENSCARG00000020777)	ENSCARG00000020824	TRIM3 (ENSCARG00000020837)	ENSCARG00000021259	ENSCARG00000021466 ##22	ENSCARG00000021474	frem2b (ENSCARG00000021494)	trpc4b (ENSCARG00000021619)	postnb (ENSCARG00000021685)	spartb (ENSCARG00000022616)	DCLK1 (ENSCARG00000022638)	ENSCARG00000023025	NBEA (ENSCARG00000023189)	mab21l1 (ENSCARG00000026255)	ENSCARG00000026303	ENSCARG00000027014	trmt9b (ENSCARG00000027032)	PDS5B (ENSCARG00000027071)	ENSCARG00000027123	ENSCARG00000027134
Cyprininae_a	ANCESTRAL SPECIES	41	ENSGT00940000161369.B.b.a.b.f.e.a.a	ENSGT00940000161369.B.b.a.a.a.a.a	ENSGT00950000183120.i.a.e	ENSGT00390000009484	ENSGT00940000162967	ENSGT00940000159635.e	ENSGT00940000155499.c.b	ENSGT00940000158948.b.t.a.b	ENSGT00610000086058.b.w.a.a	ENSGT00390000003602.e	ENSGT00940000163671.a.a.b.a	ENSGT00950000183040.A.a.c.a.a	ENSGT00940000155128.a.a.a.a.a	ENSGT00940000158173.f.f	ENSGT00940000155739	ENSGT00950000182866.D.d.b.bb.a.b ##22	ENSGT00940000155313.g.b.b	ENSGT01060000248594.e.b.a.f	ENSGT00530000063860.b.c.a	ENSGT00390000012235.k.h	ENSGT00940000154956.sb.a.a.b	ENSGT00940000154934.B.eb.d	ENSGT01050000244827.C.c.a.b.b	ENSGT00950000183061.a.b.a.a.a	ENSGT00940000166005	ENSGT00940000165093.k	ENSGT00940000157257.m.b	ENSGT00940000161440.d	ENSGT00940000166189	ENSGT00940000156538.b.c	ENSGT00940000180530
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	2327													ENSSGRG00000002488 ##22	ENSSGRG00000002483	ENSSGRG00000002479 ##22	ENSSGRG00000002476 ##22
Golden-line barbel	MODERN SPECIES	2327														ENSSGRG00000002488 ##22	ENSSGRG00000002483	ENSSGRG00000002479 ##22	ENSSGRG00000002476 ##22
Golden-line barbel	MODERN SPECIES	669	ENSSGRG00000036818	ENSSGRG00000036817	hmgb1b (ENSSGRG00000036814)	ENSSGRG00000036813	ENSSGRG00000036809	b3glcta (ENSSGRG00000036807)	rxfp2b (ENSSGRG00000036803)	ENSSGRG00000036801	FRY (ENSSGRG00000036458)	brca2 (ENSSGRG00000036407)	ENSSGRG00000036402	arfip2a (ENSSGRG00000036388)	ENSSGRG00000036385	TRIM3 (ENSSGRG00000036326)	ENSSGRG00000036319	ENSSGRG00000036317 ##22
Golden-line barbel	MODERN SPECIES	2327																ENSSGRG00000002488 ##22	ENSSGRG00000002483	ENSSGRG00000002479 ##22	ENSSGRG00000002476 ##22
Common carp reference	MODERN SPECIES	39	ENSCCRG00000007533	ENSCCRG00000007527	ENSCCRG00000035302	hmgb1b (ENSCCRG00000007516)	ENSCCRG00000018438	HSPH1 (ENSCCRG00000013464)	b3glcta (ENSCCRG00000013438)	rxfp2b (ENSCCRG00000029490)	FRY (ENSCCRG00000004038)	brca2 (ENSCCRG00000003895)	ENSCCRG00000054651	arfip2a (ENSCCRG00000059762)	ENSCCRG00000018460	ENSCCRG00000009420	ENSCCRG00000047922	ENSCCRG00000047915 ##22	frem2b (ENSCCRG00000059074)	trpc4b (ENSCCRG00000028958)	postnb (ENSCCRG00000028986)	spartb (ENSCCRG00000035962)	DCLK1 (ENSCCRG00000036118)	NBEA (ENSCCRG00000045289)	mab21l1 (ENSCCRG00000079533)	ENSCCRG00000047044	ENSCCRG00000055058	trmt9b (ENSCCRG00000019765)	ENSCCRG00000024787	ENSCCRG00000063992	ENSCCRG00000038342	inpp5ka (ENSCCRG00000029594)	tekt1 (ENSCCRG00000061615)
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	6	hmgb1b (ENSDARG00000030479)	ENSDARG00000089689	ENSDARG00000054572	HSPH1 (ENSDARG00000019874)	b3glcta (ENSDARG00000073917)	rxfp2b (ENSDARG00000019660)	FRY (ENSDARG00000013921)	brca2 (ENSDARG00000079015)	ENSDARG00000070025	arfip2a (ENSDARG00000059244)	ENSDARG00000086261	TRIM3 (ENSDARG00000063711)	ENSDARG00000015065	ENSDARG00000079290 ##22	ENSDARG00000079221 ##22	ENSDARG00000100716 ##22	ENSDARG00000099796 ##22	frem2b (ENSDARG00000102626)	trpc4b (ENSDARG00000102017)	postnb (ENSDARG00000104267)	spartb (ENSDARG00000103457)	dclk1b (ENSDARG00000104664)	NBEA (ENSDARG00000105184)	mab21l1 (ENSDARG00000102047)	ENSDARG00000098954	ENSDARG00000101422	trmt9b (ENSDARG00000102636)	PDS5B (ENSDARG00000098897)	ENSDARG00000103507	ENSDARG00000100794	inpp5ka (ENSDARG00000099563)
Zebrafish	MODERN SPECIES	6	ENSDARG00000090081	hmgb1b (ENSDARG00000030479)	ENSDARG00000089689	ENSDARG00000054572	HSPH1 (ENSDARG00000019874)	b3glcta (ENSDARG00000073917)	rxfp2b (ENSDARG00000019660)	FRY (ENSDARG00000013921)	brca2 (ENSDARG00000079015)	ENSDARG00000070025	arfip2a (ENSDARG00000059244)	ENSDARG00000086261	TRIM3 (ENSDARG00000063711)	ENSDARG00000015065	ENSDARG00000079290 ##22	ENSDARG00000079221 ##22	ENSDARG00000100716 ##22	ENSDARG00000099796 ##22	frem2b (ENSDARG00000102626)	trpc4b (ENSDARG00000102017)	postnb (ENSDARG00000104267)	spartb (ENSDARG00000103457)	dclk1b (ENSDARG00000104664)	NBEA (ENSDARG00000105184)	mab21l1 (ENSDARG00000102047)	ENSDARG00000098954	ENSDARG00000101422	trmt9b (ENSDARG00000102636)	PDS5B (ENSDARG00000098897)	ENSDARG00000103507	ENSDARG00000100794
Zebrafish	MODERN SPECIES	6	ENSDARG00000089689	ENSDARG00000054572	HSPH1 (ENSDARG00000019874)	b3glcta (ENSDARG00000073917)	rxfp2b (ENSDARG00000019660)	FRY (ENSDARG00000013921)	brca2 (ENSDARG00000079015)	ENSDARG00000070025	arfip2a (ENSDARG00000059244)	ENSDARG00000086261	TRIM3 (ENSDARG00000063711)	ENSDARG00000015065	ENSDARG00000079290 ##22	ENSDARG00000079221 ##22	ENSDARG00000100716 ##22	ENSDARG00000099796 ##22	frem2b (ENSDARG00000102626)	trpc4b (ENSDARG00000102017)	postnb (ENSDARG00000104267)	spartb (ENSDARG00000103457)	dclk1b (ENSDARG00000104664)	NBEA (ENSDARG00000105184)	mab21l1 (ENSDARG00000102047)	ENSDARG00000098954	ENSDARG00000101422	trmt9b (ENSDARG00000102636)	PDS5B (ENSDARG00000098897)	ENSDARG00000103507	ENSDARG00000100794	inpp5ka (ENSDARG00000099563)	tekt1 (ENSDARG00000101331)
Zebrafish	MODERN SPECIES	6	ENSDARG00000097869	ENSDARG00000090081	hmgb1b (ENSDARG00000030479)	ENSDARG00000089689	ENSDARG00000054572	HSPH1 (ENSDARG00000019874)	b3glcta (ENSDARG00000073917)	rxfp2b (ENSDARG00000019660)	FRY (ENSDARG00000013921)	brca2 (ENSDARG00000079015)	ENSDARG00000070025	arfip2a (ENSDARG00000059244)	ENSDARG00000086261	TRIM3 (ENSDARG00000063711)	ENSDARG00000015065	ENSDARG00000079290 ##22	ENSDARG00000079221 ##22	ENSDARG00000100716 ##22	ENSDARG00000099796 ##22	frem2b (ENSDARG00000102626)	trpc4b (ENSDARG00000102017)	postnb (ENSDARG00000104267)	spartb (ENSDARG00000103457)	dclk1b (ENSDARG00000104664)	NBEA (ENSDARG00000105184)	mab21l1 (ENSDARG00000102047)	ENSDARG00000098954	ENSDARG00000101422	trmt9b (ENSDARG00000102636)	PDS5B (ENSDARG00000098897)	ENSDARG00000103507
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.a ##22
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	7	ABCD2 (ENSCHAG00000020077)	slco1d1 (ENSCHAG00000019966)	ENSCHAG00000019537	SLC2A13 (ENSCHAG00000019444)	ENSCHAG00000019081	slco1d1 (ENSCHAG00000018529)	ENSCHAG00000018462	slco1f3 (ENSCHAG00000018186)	ENSCHAG00000018172	pyroxd1 (ENSCHAG00000018076)	arl1 (ENSCHAG00000018021)	UTP20 (ENSCHAG00000017904)	ENSCHAG00000017882	SLC5A8 (ENSCHAG00000017861)	ENSCHAG00000017835 ##22	ENSCHAG00000017825 ##22	ENSCHAG00000017804	ENSCHAG00000017788	ENSCHAG00000017780	trmu (ENSCHAG00000017690)	ENSCHAG00000016028	ENSCHAG00000015985	ENSCHAG00000015982	phyh (ENSCHAG00000015872)	ucmaa (ENSCHAG00000015857)	ENSCHAG00000015843	ENSCHAG00000015823	slc22a4 (ENSCHAG00000015709)	socs2 (ENSCHAG00000015691)	cradd (ENSCHAG00000015689)	ENSCHAG00000015681
Atlantic herring	MODERN SPECIES	7	ENSCHAG00000020445	ABCD2 (ENSCHAG00000020077)	slco1d1 (ENSCHAG00000019966)	ENSCHAG00000019537	SLC2A13 (ENSCHAG00000019444)	ENSCHAG00000019081	slco1d1 (ENSCHAG00000018529)	ENSCHAG00000018462	slco1f3 (ENSCHAG00000018186)	ENSCHAG00000018172	pyroxd1 (ENSCHAG00000018076)	arl1 (ENSCHAG00000018021)	UTP20 (ENSCHAG00000017904)	ENSCHAG00000017882	SLC5A8 (ENSCHAG00000017861)	ENSCHAG00000017835 ##22	ENSCHAG00000017825 ##22	ENSCHAG00000017804	ENSCHAG00000017788	ENSCHAG00000017780	trmu (ENSCHAG00000017690)	ENSCHAG00000016028	ENSCHAG00000015985	ENSCHAG00000015982	phyh (ENSCHAG00000015872)	ucmaa (ENSCHAG00000015857)	ENSCHAG00000015843	ENSCHAG00000015823	slc22a4 (ENSCHAG00000015709)	socs2 (ENSCHAG00000015691)	cradd (ENSCHAG00000015689)
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	4	b3galnt2 (ENSCHAG00000010483)	GNG4 (ENSCHAG00000010455)	LYST (ENSCHAG00000009851)	NID1 (ENSCHAG00000008235)	GPR137B (ENSCHAG00000007929)	ENSCHAG00000007915	fkbp6 (ENSCHAG00000007909)	ENSCHAG00000007902	ENSCHAG00000007876	ctbp2a (ENSCHAG00000007630)	cisd1 (ENSCHAG00000007599)	ENSCHAG00000007589	ENSCHAG00000007582	ENSCHAG00000007566	ENSCHAG00000007550	ENSCHAG00000007537 ##22	ENSCHAG00000007528 ##22	ENSCHAG00000007358	pcdh15a (ENSCHAG00000002607)	dkk1a (ENSCHAG00000002273)	prkg1a (ENSCHAG00000002051)	nkx1.2la (ENSCHAG00000002007)	FAM53B (ENSCHAG00000001877)	eef1akmt2 (ENSCHAG00000001839)	abraxas2 (ENSCHAG00000001797)	zranb1b (ENSCHAG00000001261)	SMOC2 (ENSCHAG00000001012)	dact2 (ENSCHAG00000000937)	ablim1a (ENSCHAG00000000667)	ENSCHAG00000000507	ENSCHAG00000000480
Atlantic herring	MODERN SPECIES	4	GNG4 (ENSCHAG00000010455)	LYST (ENSCHAG00000009851)	NID1 (ENSCHAG00000008235)	GPR137B (ENSCHAG00000007929)	ENSCHAG00000007915	fkbp6 (ENSCHAG00000007909)	ENSCHAG00000007902	ENSCHAG00000007876	ctbp2a (ENSCHAG00000007630)	cisd1 (ENSCHAG00000007599)	ENSCHAG00000007589	ENSCHAG00000007582	ENSCHAG00000007566	ENSCHAG00000007550	ENSCHAG00000007537 ##22	ENSCHAG00000007528 ##22	ENSCHAG00000007358	pcdh15a (ENSCHAG00000002607)	dkk1a (ENSCHAG00000002273)	prkg1a (ENSCHAG00000002051)	nkx1.2la (ENSCHAG00000002007)	FAM53B (ENSCHAG00000001877)	eef1akmt2 (ENSCHAG00000001839)	abraxas2 (ENSCHAG00000001797)	zranb1b (ENSCHAG00000001261)	SMOC2 (ENSCHAG00000001012)	dact2 (ENSCHAG00000000937)	ablim1a (ENSCHAG00000000667)	ENSCHAG00000000507	ENSCHAG00000000480	ENSCHAG00000000450
Atlantic herring	MODERN SPECIES	23	ENSCHAG00000012131	ENSCHAG00000012138	ENSCHAG00000012145	MMP11 (ENSCHAG00000012170)	ENSCHAG00000012366	ENSCHAG00000012393	ENSCHAG00000012402	ENSCHAG00000012422	ENSCHAG00000012440	ENSCHAG00000012483	ENSCHAG00000012489	YKT6 (ENSCHAG00000012522)	gck (ENSCHAG00000012544)	myl7 (ENSCHAG00000012672)	ENSCHAG00000012754	ENSCHAG00000012789 ##22	NPC1L1 (ENSCHAG00000012912)	dusp2 (ENSCHAG00000015093)	adra2b (ENSCHAG00000015103)	gpat2 (ENSCHAG00000015126)	FAHD2A (ENSCHAG00000015404)	zgc:152830 (ENSCHAG00000015420)	ddx51 (ENSCHAG00000015605)	CABIN1 (ENSCHAG00000015888)	tbx16 (ENSCHAG00000016138)	KLHL22 (ENSCHAG00000016230)	npy8br (ENSCHAG00000016242)	kctd9a (ENSCHAG00000016250)	ENSCHAG00000016357	ENSCHAG00000016369	ENSCHAG00000016375
Otomorpha	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b ##22
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	21	ENSGT00930000150950.a	ENSGT00940000157252.m.b	ENSGT00940000155002.b.e.a	ENSGT00940000158085.b.a	ENSGT00940000154453.a.b.b.e.a	ENSGT01090000260098.B.b	ENSGT00940000161191.A.a.a	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b.e	ENSGT00940000160269.f	ENSGT00940000154200.B.t	ENSGT00940000165699.B	ENSGT01030000234558.A.a.b	ENSGT00520000055625.b	ENSGT00940000161292	ENSGT00950000182866.D.d.b.bb.b.a ##22	ENSGT01060000248594.f	ENSGT00940000157649	ENSGT00940000157002	ENSGT00940000156350.h	ENSGT00940000154811.B.a.a.b	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105.k.a	ENSGT00940000157951	ENSGT00940000155939	ENSGT00390000013183.c	ENSGT00940000166789	ENSGT00940000155918.c.a	ENSGT00940000158727.b.a.a.a	ENSGT00940000155406.g
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.a.a ##22
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2725												ENSCARG00000068092	ENSCARG00000068087	ENSCARG00000068079	ENSCARG00000068075	ENSCARG00000068043 ##22	ENSCARG00000068033 ##22
Goldfish	MODERN SPECIES	3100													ENSCARG00000044007	ENSCARG00000043998	ENSCARG00000043990	ENSCARG00000043757 ##22	ENSCARG00000043732 ##22	ENSCARG00000043698	ENSCARG00000043681	ENSCARG00000043653	ENSCARG00000043675	ENSCARG00000043641	ENSCARG00000043632	ENSCARG00000043620	ENSCARG00000043613	ENSCARG00000043607	ENSCARG00000043597	ENSCARG00000043593	ENSCARG00000043580	ENSCARG00000043570	ENSCARG00000043543
Goldfish	MODERN SPECIES	2725											ENSCARG00000068092	ENSCARG00000068087	ENSCARG00000068079	ENSCARG00000068075	ENSCARG00000068043 ##22	ENSCARG00000068033 ##22
Cyprininae_a	ANCESTRAL SPECIES	340				ENSGT00940000155002.b.e.a.c.b	ENSGT00940000158085.b.a.a.a.a	ENSGT00940000154453.a.b.b.e.a.c	ENSGT01090000260098.B.b.c	ENSGT00940000157819.o	ENSGT01050000244888.b.a.c.b.e.b	ENSGT00940000160269.f.a	ENSGT00940000154200.B.t.a.a	ENSGT00940000165699.B.c	ENSGT01030000234558.A.a.b.h	ENSGT00520000055625.b.l.b	ENSGT00940000161292.u.a	ENSGT00950000182866.D.d.b.bb.b.a.a ##22	ENSGT01060000248594.f.c	ENSGT00940000157649.i.b	ENSGT00940000157002.c	ENSGT00940000156350.h.b	ENSGT00940000154811.B.a.a.b.e.b	ENSGT00940000154811.A.p	ENSGT00940000153498.B.a.m	ENSGT00940000156105.k.a.a	ENSGT00940000157951.r	ENSGT00940000155939.e.a	ENSGT00940000166789.a	ENSGT00940000155918.c.a.d	ENSGT00940000155406.g.a	ENSGT00940000164792.a.a	ENSGT00940000153866.A.o
Golden-line barbel	MODERN SPECIES	1065														dipk2ab (ENSSGRG00000016704)	CHST2 (ENSSGRG00000016705)	ENSSGRG00000016706 ##22	trpc1 (ENSSGRG00000016712)	pcolce2b (ENSSGRG00000016767)	mastl (ENSSGRG00000016769)	mastl (ENSSGRG00000016770)	acbd5a (ENSSGRG00000016771)	ENSSGRG00000016775
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.a.b.a.a.a ##22
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	14	ENSCARG00000044804	ENSCARG00000044806	ENSCARG00000044808	ENSCARG00000044815	ENSCARG00000044824	ENSCARG00000044848	ENSCARG00000044866	ENSCARG00000044876	ENSCARG00000044887	ENSCARG00000044894	ENSCARG00000044905	ENSCARG00000044922	ENSCARG00000044950	ENSCARG00000044984	ENSCARG00000045001	ENSCARG00000045012 ##22	ENSCARG00000045031	ENSCARG00000045064	ENSCARG00000045079	ENSCARG00000045097	ENSCARG00000045109	ENSCARG00000045123	ENSCARG00000045142	ENSCARG00000045165	ENSCARG00000045175	ENSCARG00000045184	ENSCARG00000045200	ENSCARG00000045222	ENSCARG00000045238	ENSCARG00000045251	ENSCARG00000045256
Goldfish	MODERN SPECIES	3100												ENSCARG00000044007	ENSCARG00000043998	ENSCARG00000043990	ENSCARG00000043757 ##22	ENSCARG00000043732 ##22	ENSCARG00000043698	ENSCARG00000043681	ENSCARG00000043653	ENSCARG00000043675	ENSCARG00000043641	ENSCARG00000043632	ENSCARG00000043620	ENSCARG00000043613	ENSCARG00000043607	ENSCARG00000043597	ENSCARG00000043593	ENSCARG00000043580	ENSCARG00000043570	ENSCARG00000043543	ENSCARG00000043511
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.a.b.a.a.a ##22
Common carp reference	MODERN SPECIES	40	ENSCCRG00000076198	cpb1 (ENSCCRG00000014639)	AGTR1 (ENSCCRG00000014634)	zic4 (ENSCCRG00000066417)	zic1 (ENSCCRG00000037371)	ENSCCRG00000072439	ENSCCRG00000061822	plod2 (ENSCCRG00000002279)	ENSCCRG00000053427	ENSCCRG00000057039	dipk2ab (ENSCCRG00000057972)	ENSCCRG00000017382 ##22	ENSCCRG00000069416	ENSCCRG00000006150 ##22	ENSCCRG00000081742 ##22	ENSCCRG00000016954 ##22	ENSCCRG00000052933	trpc1 (ENSCCRG00000031641)	pcolce2b (ENSCCRG00000039657)	mastl (ENSCCRG00000029910)	acbd5a (ENSCCRG00000037855)	abi1a (ENSCCRG00000029926)	pdss1 (ENSCCRG00000063907)	apbb1ip (ENSCCRG00000073219)	ENSCCRG00000068949	gad2 (ENSCCRG00000004640)	myo3a (ENSCCRG00000019857)	zgc:174877 (ENSCCRG00000022835)	anxa13 (ENSCCRG00000042382)	GPR158 (ENSCCRG00000028801)	ENSCCRG00000025243
Cyprininae	ANCESTRAL SPECIES	432								ENSGT00940000157819.o	ENSGT01050000244888.b.a.c.b.e.b	ENSGT00940000160269.f.a	ENSGT00940000154200.B.t.a.a	ENSGT00940000165699.B.c	ENSGT01030000234558.A.a.b.h	ENSGT00520000055625.b.l.b	ENSGT00940000161292.u.a	ENSGT00950000182866.D.d.b.bb.b.a.b.a.a.b ##22	ENSGT01060000248594.f.c	ENSGT00940000157649.i.b	ENSGT00940000157002.c	ENSGT00940000156350.h.b	ENSGT00940000154811.B.a.a.b.e.b	ENSGT00940000154811.A.p	ENSGT00940000153498.B.a	ENSGT00940000156105.k.a.a	ENSGT00940000157951.r	ENSGT00940000155939.e.a	ENSGT00940000166789.a	ENSGT00940000155918.c.a.d	ENSGT00940000155406.g.a	ENSGT00940000164792.a	ENSGT00940000153866.A.o
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.a.b.a.a.b ##22
Common carp reference	MODERN SPECIES	40	ENSCCRG00000070265	PFKP (ENSCCRG00000031710)	klf6a (ENSCCRG00000019179)	ENSCCRG00000014803	ENSCCRG00000076198	cpb1 (ENSCCRG00000014639)	AGTR1 (ENSCCRG00000014634)	zic4 (ENSCCRG00000066417)	zic1 (ENSCCRG00000037371)	ENSCCRG00000072439	ENSCCRG00000061822	plod2 (ENSCCRG00000002279)	ENSCCRG00000053427	ENSCCRG00000057039	dipk2ab (ENSCCRG00000057972)	ENSCCRG00000017382 ##22	ENSCCRG00000069416	ENSCCRG00000006150 ##22	ENSCCRG00000081742 ##22	ENSCCRG00000016954 ##22	ENSCCRG00000052933	trpc1 (ENSCCRG00000031641)	pcolce2b (ENSCCRG00000039657)	mastl (ENSCCRG00000029910)	acbd5a (ENSCCRG00000037855)	abi1a (ENSCCRG00000029926)	pdss1 (ENSCCRG00000063907)	apbb1ip (ENSCCRG00000073219)	ENSCCRG00000068949	gad2 (ENSCCRG00000004640)	myo3a (ENSCCRG00000019857)
Goldfish	MODERN SPECIES	43												ENSCARG00000064862	dipk2ab (ENSCARG00000064865)	ENSCARG00000064871	CHST2 (ENSCARG00000064873)	ENSCARG00000064879 ##22	trpc1 (ENSCARG00000064882)	ENSCARG00000064896	ENSCARG00000064899	mastl (ENSCARG00000064910)	acbd5a (ENSCARG00000064931)	abi1a (ENSCARG00000064987)	pdss1 (ENSCARG00000065456)	apbb1ip (ENSCARG00000065476)	gad2 (ENSCARG00000065510)	myo3a (ENSCARG00000065661)	anxa13 (ENSCARG00000066612)	GPR158 (ENSCARG00000066662)	ENSCARG00000066677	ENSCARG00000066699	ENSCARG00000066987
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.a.b.a.b ##22
Goldfish	MODERN SPECIES	16	ENSCARG00000025332	ENSCARG00000025340	ENSCARG00000025346	ENSCARG00000025357	decr2 (ENSCARG00000025369)	wdr24 (ENSCARG00000025424)	zgc:112496 (ENSCARG00000025432)	rhbdl1 (ENSCARG00000025449)	h1-0 (ENSCARG00000025473)	rhot2 (ENSCARG00000025544)	ENSCARG00000027115	elovl2 (ENSCARG00000027129)	ENSCARG00000027217	ENSCARG00000027245	dipk2ab (ENSCARG00000013900)	ENSCARG00000013914 ##22	ENSCARG00000013921	CHST2 (ENSCARG00000013926)	ENSCARG00000013929 ##22	trpc1 (ENSCARG00000013947)	pcolce2b (ENSCARG00000014010)	mastl (ENSCARG00000014077)	acbd5a (ENSCARG00000014142)	abi1a (ENSCARG00000014165)	ENSCARG00000014375	apbb1ip (ENSCARG00000014401)	GAD65 (ENSCARG00000014446)	myo3a (ENSCARG00000014616)	ENSCARG00000015081	anxa13 (ENSCARG00000015100)	GPR158 (ENSCARG00000015400)
Cyprininae	ANCESTRAL SPECIES	274														ENSGT00520000055625.b.l.a	ENSGT00940000161292.u.b	ENSGT00950000182866.D.d.b.bb.b.a.b.b ##22	ENSGT01060000248594.f.d	ENSGT00940000157649.i.a	ENSGT00940000157002.d	ENSGT00940000156350.h.a.a	ENSGT00940000154811.B.a.a.b.f	ENSGT00940000154811.B.a.a.b.e.a	ENSGT00390000005508.b	ENSGT00940000156105.k.a.b	ENSGT00940000157951.q	ENSGT00940000155939.f	ENSGT00390000013183.c	ENSGT00940000166789.b	ENSGT00940000155918.c.a.c	ENSGT00940000158727.b.a.a.a	ENSGT00940000155406.g.b
Cyprininae_a	ANCESTRAL SPECIES	166	ENSGT00930000150950.a.e	ENSGT00940000157252.m.b.a.b.a	ENSGT00940000155002.b.e.a.c.a	ENSGT00940000158085.b.a.a.a.b	ENSGT00940000154453.a.b.b.e.a.d	ENSGT01090000260098.B.b.d	ENSGT00940000161191.A.a.a	ENSGT00940000157819.p	ENSGT01050000244888.b.a.c.b.e.a	ENSGT00940000160269.f.b	ENSGT00940000154200.B.t.a.b	ENSGT00940000154200.B.t.b	ENSGT01030000234558.A.a.b.g.b	ENSGT00520000055625.b.l.a	ENSGT00940000161292.u.b	ENSGT00950000182866.D.d.b.bb.b.a.b.b ##22	ENSGT01060000248594.f.d	ENSGT00940000157649.i.a	ENSGT00940000157002.d	ENSGT00940000156350.h.a.a	ENSGT00940000154811.B.a.a.b.e.a	ENSGT00940000153498.B.a.n	ENSGT00390000005508.b	ENSGT00940000156105.k.a.b	ENSGT00940000157951.q	ENSGT00940000155939.f	ENSGT00390000013183.c	ENSGT00940000166789.b	ENSGT00940000155918.c.a.c	ENSGT00940000158727.b.a.a.a	ENSGT00940000155406.g.b
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	40	ENSCCRG00000014803	ENSCCRG00000076198	cpb1 (ENSCCRG00000014639)	AGTR1 (ENSCCRG00000014634)	zic4 (ENSCCRG00000066417)	zic1 (ENSCCRG00000037371)	ENSCCRG00000072439	ENSCCRG00000061822	plod2 (ENSCCRG00000002279)	ENSCCRG00000053427	ENSCCRG00000057039	dipk2ab (ENSCCRG00000057972)	ENSCCRG00000017382 ##22	ENSCCRG00000069416	ENSCCRG00000006150 ##22	ENSCCRG00000081742 ##22	ENSCCRG00000016954 ##22	ENSCCRG00000052933	trpc1 (ENSCCRG00000031641)	pcolce2b (ENSCCRG00000039657)	mastl (ENSCCRG00000029910)	acbd5a (ENSCCRG00000037855)	abi1a (ENSCCRG00000029926)	pdss1 (ENSCCRG00000063907)	apbb1ip (ENSCCRG00000073219)	ENSCCRG00000068949	gad2 (ENSCCRG00000004640)	myo3a (ENSCCRG00000019857)	zgc:174877 (ENSCCRG00000022835)	anxa13 (ENSCCRG00000042382)	GPR158 (ENSCCRG00000028801)
Common carp reference	MODERN SPECIES	40	klf6a (ENSCCRG00000019179)	ENSCCRG00000014803	ENSCCRG00000076198	cpb1 (ENSCCRG00000014639)	AGTR1 (ENSCCRG00000014634)	zic4 (ENSCCRG00000066417)	zic1 (ENSCCRG00000037371)	ENSCCRG00000072439	ENSCCRG00000061822	plod2 (ENSCCRG00000002279)	ENSCCRG00000053427	ENSCCRG00000057039	dipk2ab (ENSCCRG00000057972)	ENSCCRG00000017382 ##22	ENSCCRG00000069416	ENSCCRG00000006150 ##22	ENSCCRG00000081742 ##22	ENSCCRG00000016954 ##22	ENSCCRG00000052933	trpc1 (ENSCCRG00000031641)	pcolce2b (ENSCCRG00000039657)	mastl (ENSCCRG00000029910)	acbd5a (ENSCCRG00000037855)	abi1a (ENSCCRG00000029926)	pdss1 (ENSCCRG00000063907)	apbb1ip (ENSCCRG00000073219)	ENSCCRG00000068949	gad2 (ENSCCRG00000004640)	myo3a (ENSCCRG00000019857)	zgc:174877 (ENSCCRG00000022835)	anxa13 (ENSCCRG00000042382)
Golden-line barbel	MODERN SPECIES	97	idi1 (ENSSGRG00000036325)	wdr37 (ENSSGRG00000036170)	ADARB2 (ENSSGRG00000036164)	PFKP (ENSSGRG00000032565)	ENSSGRG00000032540	ENSSGRG00000032539	CCNY (ENSSGRG00000032291)	fzd8a (ENSSGRG00000032289)	cpb1 (ENSSGRG00000032288)	zic1 (ENSSGRG00000032287)	zic4 (ENSSGRG00000032286)	plod2 (ENSSGRG00000029256)	dipk2ab (ENSSGRG00000029170)	ENSSGRG00000029169	CHST2 (ENSSGRG00000029167)	ENSSGRG00000029166 ##22	trpc1 (ENSSGRG00000028759)	pcolce2b (ENSSGRG00000028744)	mastl (ENSSGRG00000028743)	acbd5a (ENSSGRG00000028742)	abi1a (ENSSGRG00000027868)	pdss1 (ENSSGRG00000027815)	ENSSGRG00000027813	apbb1ip (ENSSGRG00000027811)	myo3a (ENSSGRG00000026356)	anxa13 (ENSSGRG00000026094)	GPR158 (ENSSGRG00000026059)	ARHGAP21 (ENSSGRG00000024356)	ENSSGRG00000024332	enkur (ENSSGRG00000024330)	THNSL1 (ENSSGRG00000024328)
Goldfish	MODERN SPECIES	16	ENSCARG00000025357	decr2 (ENSCARG00000025369)	wdr24 (ENSCARG00000025424)	zgc:112496 (ENSCARG00000025432)	rhbdl1 (ENSCARG00000025449)	h1-0 (ENSCARG00000025473)	rhot2 (ENSCARG00000025544)	ENSCARG00000027115	elovl2 (ENSCARG00000027129)	ENSCARG00000027217	ENSCARG00000027245	dipk2ab (ENSCARG00000013900)	ENSCARG00000013914 ##22	ENSCARG00000013921	CHST2 (ENSCARG00000013926)	ENSCARG00000013929 ##22	trpc1 (ENSCARG00000013947)	pcolce2b (ENSCARG00000014010)	mastl (ENSCARG00000014077)	acbd5a (ENSCARG00000014142)	abi1a (ENSCARG00000014165)	ENSCARG00000014375	apbb1ip (ENSCARG00000014401)	GAD65 (ENSCARG00000014446)	myo3a (ENSCARG00000014616)	ENSCARG00000015081	anxa13 (ENSCARG00000015100)	GPR158 (ENSCARG00000015400)	PTCHD3 (ENSCARG00000015652)	ARHGAP21 (ENSCARG00000015731)	enkur (ENSCARG00000017048)
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	16	wdr37 (ENSDARG00000074611)	ADARB2 (ENSDARG00000071823)	PFKP (ENSDARG00000028000)	klf6a (ENSDARG00000029072)	CCNY (ENSDARG00000063677)	ENSDARG00000116895	fzd8a (ENSDARG00000045444)	cpb1 (ENSDARG00000045442)	AGTR1 (ENSDARG00000045443)	zic1 (ENSDARG00000015567)	zic4 (ENSDARG00000031307)	ENSDARG00000077468	plod2 (ENSDARG00000011821)	dipk2ab (ENSDARG00000055629)	CHST2 (ENSDARG00000058585)	ENSDARG00000092898 ##22	ENSDARG00000061221 ##22	ENSDARG00000095333 ##22	ENSDARG00000095245 ##22	trpc1 (ENSDARG00000061203)	pcolce2b (ENSDARG00000055575)	ENSDARG00000113632	mastl (ENSDARG00000055566)	ENSDARG00000116862	acbd5a (ENSDARG00000034883)	abi1a (ENSDARG00000010155)	pdss1 (ENSDARG00000017910)	ENSDARG00000095609	ENSDARG00000055520	apbb1ip (ENSDARG00000016505)	ENSDARG00000055506
Zebrafish	MODERN SPECIES	16	PFKP (ENSDARG00000028000)	klf6a (ENSDARG00000029072)	CCNY (ENSDARG00000063677)	ENSDARG00000116895	fzd8a (ENSDARG00000045444)	cpb1 (ENSDARG00000045442)	AGTR1 (ENSDARG00000045443)	zic1 (ENSDARG00000015567)	zic4 (ENSDARG00000031307)	ENSDARG00000077468	plod2 (ENSDARG00000011821)	dipk2ab (ENSDARG00000055629)	CHST2 (ENSDARG00000058585)	ENSDARG00000092898 ##22	ENSDARG00000061221 ##22	ENSDARG00000095333 ##22	ENSDARG00000095245 ##22	trpc1 (ENSDARG00000061203)	pcolce2b (ENSDARG00000055575)	ENSDARG00000113632	mastl (ENSDARG00000055566)	ENSDARG00000116862	acbd5a (ENSDARG00000034883)	abi1a (ENSDARG00000010155)	pdss1 (ENSDARG00000017910)	ENSDARG00000095609	ENSDARG00000055520	apbb1ip (ENSDARG00000016505)	ENSDARG00000055506	ENSDARG00000096932	gad2 (ENSDARG00000015537)
Zebrafish	MODERN SPECIES	16	ADARB2 (ENSDARG00000071823)	PFKP (ENSDARG00000028000)	klf6a (ENSDARG00000029072)	CCNY (ENSDARG00000063677)	ENSDARG00000116895	fzd8a (ENSDARG00000045444)	cpb1 (ENSDARG00000045442)	AGTR1 (ENSDARG00000045443)	zic1 (ENSDARG00000015567)	zic4 (ENSDARG00000031307)	ENSDARG00000077468	plod2 (ENSDARG00000011821)	dipk2ab (ENSDARG00000055629)	CHST2 (ENSDARG00000058585)	ENSDARG00000092898 ##22	ENSDARG00000061221 ##22	ENSDARG00000095333 ##22	ENSDARG00000095245 ##22	trpc1 (ENSDARG00000061203)	pcolce2b (ENSDARG00000055575)	ENSDARG00000113632	mastl (ENSDARG00000055566)	ENSDARG00000116862	acbd5a (ENSDARG00000034883)	abi1a (ENSDARG00000010155)	pdss1 (ENSDARG00000017910)	ENSDARG00000095609	ENSDARG00000055520	apbb1ip (ENSDARG00000016505)	ENSDARG00000055506	ENSDARG00000096932
Zebrafish	MODERN SPECIES	16	klf6a (ENSDARG00000029072)	CCNY (ENSDARG00000063677)	ENSDARG00000116895	fzd8a (ENSDARG00000045444)	cpb1 (ENSDARG00000045442)	AGTR1 (ENSDARG00000045443)	zic1 (ENSDARG00000015567)	zic4 (ENSDARG00000031307)	ENSDARG00000077468	plod2 (ENSDARG00000011821)	dipk2ab (ENSDARG00000055629)	CHST2 (ENSDARG00000058585)	ENSDARG00000092898 ##22	ENSDARG00000061221 ##22	ENSDARG00000095333 ##22	ENSDARG00000095245 ##22	trpc1 (ENSDARG00000061203)	pcolce2b (ENSDARG00000055575)	ENSDARG00000113632	mastl (ENSDARG00000055566)	ENSDARG00000116862	acbd5a (ENSDARG00000034883)	abi1a (ENSDARG00000010155)	pdss1 (ENSDARG00000017910)	ENSDARG00000095609	ENSDARG00000055520	apbb1ip (ENSDARG00000016505)	ENSDARG00000055506	ENSDARG00000096932	gad2 (ENSDARG00000015537)	myo3a (ENSDARG00000010186)
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.b ##22
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.b.a.a.a ##22
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2633													ENSCARG00000042970	ENSCARG00000042963	ENSCARG00000042927 ##22	ENSCARG00000042895 ##22
Goldfish	MODERN SPECIES	806						ENSCARG00000031163	ENSCARG00000031130	ENSCARG00000031120	ENSCARG00000031112	ENSCARG00000031092	b3gntl1 (ENSCARG00000031041)	METRNL (ENSCARG00000024161)	ENSCARG00000024157	ENSCARG00000024153	ENSCARG00000024147 ##22	ENSCARG00000024141 ##22	ENSCARG00000024133	ENSCARG00000024118 ##22	ENSCARG00000024112	ENSCARG00000024101	ENSCARG00000024095	ENSCARG00000024091	ENSCARG00000024077	ENSCARG00000024048
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	806				ENSCARG00000031163	ENSCARG00000031130	ENSCARG00000031120	ENSCARG00000031112	ENSCARG00000031092	b3gntl1 (ENSCARG00000031041)	METRNL (ENSCARG00000024161)	ENSCARG00000024157	ENSCARG00000024153	ENSCARG00000024147 ##22	ENSCARG00000024141 ##22	ENSCARG00000024133	ENSCARG00000024118 ##22	ENSCARG00000024112	ENSCARG00000024101	ENSCARG00000024095	ENSCARG00000024091	ENSCARG00000024077	ENSCARG00000024048
Goldfish	MODERN SPECIES	2633														ENSCARG00000042970	ENSCARG00000042963	ENSCARG00000042927 ##22	ENSCARG00000042895 ##22
Goldfish	MODERN SPECIES	126															ENSCARG00000020161 ##22	ENSCARG00000020174 ##22	ENSCARG00000020182	ENSCARG00000020202	ENSCARG00000020218	ENSCARG00000020231	ENSCARG00000020247	ENSCARG00000020270
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.b.a.a.a ##22
Common carp reference	MODERN SPECIES	27	ENSCCRG00000053815	ENSCCRG00000015620	ENSCCRG00000077312	ENSCCRG00000068550	ENSCCRG00000019195	ENSCCRG00000079676	ENSCCRG00000028831	ENSCCRG00000028834	ENSCCRG00000057661	ENSCCRG00000071578	b3gntl1 (ENSCCRG00000042001)	ENSCCRG00000067007	ENSCCRG00000076774	ENSCCRG00000082911	ENSCCRG00000068948	ENSCCRG00000023802 ##22	ENSCCRG00000062430	ENSCCRG00000032565 ##22	tspan34 (ENSCCRG00000081827)	ENSCCRG00000063323	ENSCCRG00000055998	ENSCCRG00000018144	ENSCCRG00000061400	ENSCCRG00000068301	ENSCCRG00000080844	ENSCCRG00000058823	ENSCCRG00000070910	ENSCCRG00000049873	ENSCCRG00000075908	ENSCCRG00000021812	ENSCCRG00000081147
Golden-line barbel	MODERN SPECIES	2395																ENSSGRG00000009135 ##22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.b.a.a.b ##22
Goldfish	MODERN SPECIES	126																ENSCARG00000020161 ##22	ENSCARG00000020174 ##22	ENSCARG00000020182	ENSCARG00000020202	ENSCARG00000020218	ENSCARG00000020231	ENSCARG00000020247	ENSCARG00000020270
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.b.a.b ##22
Goldfish	MODERN SPECIES	806							ENSCARG00000031163	ENSCARG00000031130	ENSCARG00000031120	ENSCARG00000031112	ENSCARG00000031092	b3gntl1 (ENSCARG00000031041)	METRNL (ENSCARG00000024161)	ENSCARG00000024157	ENSCARG00000024153	ENSCARG00000024147 ##22	ENSCARG00000024141 ##22	ENSCARG00000024133	ENSCARG00000024118 ##22	ENSCARG00000024112	ENSCARG00000024101	ENSCARG00000024095	ENSCARG00000024091	ENSCARG00000024077	ENSCARG00000024048
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b.bb.b.b.a.b ##22
Common carp reference	MODERN SPECIES	27	ENSCCRG00000077312	ENSCCRG00000068550	ENSCCRG00000019195	ENSCCRG00000079676	ENSCCRG00000028831	ENSCCRG00000028834	ENSCCRG00000057661	ENSCCRG00000071578	b3gntl1 (ENSCCRG00000042001)	ENSCCRG00000067007	ENSCCRG00000076774	ENSCCRG00000082911	ENSCCRG00000068948	ENSCCRG00000023802 ##22	ENSCCRG00000062430	ENSCCRG00000032565 ##22	tspan34 (ENSCCRG00000081827)	ENSCCRG00000063323	ENSCCRG00000055998	ENSCCRG00000018144	ENSCCRG00000061400	ENSCCRG00000068301	ENSCCRG00000080844	ENSCCRG00000058823	ENSCCRG00000070910	ENSCCRG00000049873	ENSCCRG00000075908	ENSCCRG00000021812	ENSCCRG00000081147	ENSCCRG00000057204	ENSCCRG00000058812
Golden-line barbel	MODERN SPECIES	1649									ENSSGRG00000013960	ENSSGRG00000013962	ENSSGRG00000013965	ENSSGRG00000013966	ENSSGRG00000013970	METRNL (ENSSGRG00000013972)	ENSSGRG00000013974	ENSSGRG00000013979 ##22	ENSSGRG00000013985	ENSSGRG00000013986
Cyprininae	ANCESTRAL SPECIES	511						ENSGT00970000193390.c.b.a.a.b.d.b	ENSGT01030000234558.D.b.g.a	ENSGT00940000161246	ENSGT01060000249475	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.b.b.b.a.a.a.a.a.a.a.b.a.b.b.a.a.a.b.b.b.b.b.b.a.b	ENSGT00940000154395.a.a.b.b.g.b	ENSGT01070000253760.b.b.b.c.b.c.b.a	ENSGT00950000182977.A.i.b.a.a.b.b	ENSGT00950000182977.A.i.b.a.b.b.b.b.c.b.a	ENSGT00990000207597.b	ENSGT00950000182866.D.d.b.bb.b.b.b ##22	ENSGT01010000222294.c.b.a.b.a.a.a.a.b.a.a.b.b.a.b	ENSGT00940000164506.b.a.b.a	ENSGT01010000222294.c.b.a.b.a.a.a.a.b.a.a.b.a.b.a	ENSGT01010000222294.c.b.a.b.a.a.a.a.b.a.a.b.a.a	ENSGT00390000001390.a.a.b.a.b	ENSGT00530000063870.a.a.m.a.a	ENSGT00940000158217.a.b	ENSGT00640000091565	ENSGT00940000165021.b.o.a	ENSGT01010000222294.c.b.a.a.b.b.a.b
Goldfish	MODERN SPECIES		ENSCARG00000001542	ENSCARG00000001513	ENSCARG00000001501	ENSCARG00000001498	ADGRL1 (ENSCARG00000001442)	ENSCARG00000001425	ENSCARG00000001420	ENSCARG00000001406	ENSCARG00000001377	ENSCARG00000001366	ENSCARG00000001346	ENSCARG00000001322	ENSCARG00000001317	ENSCARG00000001312	ENSCARG00000001308	ENSCARG00000001306 ##22	tspan34 (ENSCARG00000001294)	ENSCARG00000001287	ENSCARG00000001278	ENSCARG00000001276	ENSCARG00000001274	ENSCARG00000001270	ENSCARG00000001265	ENSCARG00000001260	ENSCARG00000000451	ENSCARG00000000450	ENSCARG00000000441	ENSCARG00000000436	ENSCARG00000000425	ENSCARG00000000405	ENSCARG00000000386
Cyprininae_a	ANCESTRAL SPECIES	550														ENSGT00950000182977.A.i.b.a.b.b.b.b.c.b.a	ENSGT00990000207597.b	ENSGT00950000182866.D.d.b.bb.b.b.b ##22	ENSGT01010000222294.c.b.a.b.a.a.a.a.b.a.a.b.b.a.b	ENSGT00940000164506.b.a.b.a	ENSGT01010000222294.c.b.a.b.a.a.a.a.b.a.a.a.a.b.b	ENSGT01010000222294.c.b.a.b.a.a.a.a.b.a.a.b.a.a	ENSGT00390000001390.a.a.b.a.b	ENSGT00530000063870.a.a.m.a.a	ENSGT00940000158217.a.b	ENSGT00640000091565	ENSGT00940000165021.b.o.a
Golden-line barbel	MODERN SPECIES	3981																ENSSGRG00000003888 ##22
Common carp reference	MODERN SPECIES	22	ENSCCRG00000032122	ENSCCRG00000063700	ENSCCRG00000062726	ENSCCRG00000068568	ENSCCRG00000071665	ENSCCRG00000034768	ENSCCRG00000055879	ENSCCRG00000056243	ENSCCRG00000076239	ENSCCRG00000065660	ENSCCRG00000062569	ENSCCRG00000076060	ENSCCRG00000067249	ENSCCRG00000034775	ENSCCRG00000021011	ENSCCRG00000059123 ##22	ENSCCRG00000017386	tspan34 (ENSCCRG00000017393)	ENSCCRG00000007050	ENSCCRG00000069261	ENSCCRG00000057794	ENSCCRG00000052887	ENSCCRG00000078996	ENSCCRG00000082632	ENSCCRG00000020897	ENSCCRG00000044172	ENSCCRG00000060480	ENSCCRG00000072126	ENSCCRG00000079820	ENSCCRG00000050575	ENSCCRG00000074571
Otomorpha	ANCESTRAL SPECIES	211					ENSGT01030000234530.a.e.b	ENSGT00940000162676.a.a	ENSGT01030000234530.a.f.a.a	ENSGT00940000155353.b	ENSGT01050000244897.a.a.a	ENSGT00950000182972.a.b	ENSGT01050000244824.C	ENSGT00940000175410	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b.cb ##22	ENSGT00390000014827.b	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000157037.a.c.a	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750
Otophysi	ANCESTRAL SPECIES	147	ENSGT00670000098059.c.a	ENSGT00940000156077.g.a	ENSGT00940000157352.b	ENSGT00390000000002.a.a.a.nb.a	ENSGT00990000210515	ENSGT00390000000002.a.a.a.ob	ENSGT00390000002137	ENSGT00940000167088	ENSGT00390000008458	ENSGT00940000157323	ENSGT00950000183055.b.a	ENSGT00940000155116.b	ENSGT00940000155719.b	ENSGT00390000006503.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b.cb ##22	ENSGT00390000014827.b	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000157037.a.c.a	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750
Characiphysae	ANCESTRAL SPECIES	108	ENSGT00940000157489	ENSGT00670000098059.c.a	ENSGT00940000156077.g.a	ENSGT00940000157352.b	ENSGT00390000000002.a.a.a.nb.a	ENSGT00990000210515	ENSGT00390000002137	ENSGT00940000167088	ENSGT00390000008458	ENSGT00940000157323	ENSGT00950000183055.b.a	ENSGT00940000155116.b	ENSGT00940000155719.b	ENSGT00390000006503.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b.cb ##22	ENSGT00390000014827.b	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000156835.l.a.b	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000155857.e	ENSGT00940000157037.a.c.a	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477
Characiphysae_b	ANCESTRAL SPECIES	155														ENSGT00390000006503.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b.cb ##22	ENSGT00390000014827.b	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000155857.e	ENSGT00940000157037.a.c.a	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750
Characoidei	ANCESTRAL SPECIES	175														ENSGT00390000006503.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b.cb ##22	ENSGT00390000014827.b	ENSGT00940000158980	ENSGT00940000156198.c.a	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000155857.e	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750	ENSGT00390000000483.b
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	110														zgc:92045 (ENSPNAG00000013135)	ENSPNAG00000013130	ENSPNAG00000013118 ##22	ENSPNAG00000013114 ##22	tmem107 (ENSPNAG00000013100)	aurkb (ENSPNAG00000002552)	ENSPNAG00000002544	nkx3-2 (ENSPNAG00000013055)	RAB28 (ENSPNAG00000002529)	HS3ST1 (ENSPNAG00000002510)	ENSPNAG00000013008	WDR1 (ENSPNAG00000012996)	SLC2A9 (ENSPNAG00000002477)	ENSPNAG00000012878	OTOP1 (ENSPNAG00000012870)	TMEM128 (ENSPNAG00000012806)	ENSPNAG00000002396	lyar (ENSPNAG00000012758)
Red-bellied piranha	MODERN SPECIES	110													zgc:92045 (ENSPNAG00000013135)	ENSPNAG00000013130	ENSPNAG00000013118 ##22	ENSPNAG00000013114 ##22	tmem107 (ENSPNAG00000013100)	aurkb (ENSPNAG00000002552)	ENSPNAG00000002544	nkx3-2 (ENSPNAG00000013055)	RAB28 (ENSPNAG00000002529)	HS3ST1 (ENSPNAG00000002510)	ENSPNAG00000013008	WDR1 (ENSPNAG00000012996)	SLC2A9 (ENSPNAG00000002477)	ENSPNAG00000012878	OTOP1 (ENSPNAG00000012870)	TMEM128 (ENSPNAG00000012806)	ENSPNAG00000002396	lyar (ENSPNAG00000012758)	zbtb49 (ENSPNAG00000002376)
Mexicana tetra	MODERN SPECIES	769														zgc:92045 (ENSAMXG00000031952)	ENSAMXG00000003855	ENSAMXG00000003853 ##22	tmem107 (ENSAMXG00000038715)	aurkb (ENSAMXG00000003849)	ENSAMXG00000043479	ENSAMXG00000033154	ENSAMXG00000037432	nkx3-2 (ENSAMXG00000040725)	RAB28 (ENSAMXG00000034917)
Clupeiformes	ANCESTRAL SPECIES	37								ENSGT00390000002866.b	ENSGT00510000052596.a	ENSGT00940000153662.A.e	ENSGT00950000182881.a.b.a.b.z.b	ENSGT01050000244824.C	ENSGT00390000005067.a	ENSGT00950000183073.a.a.b	ENSGT00390000003354	ENSGT00950000182866.D.d.b.cb ##22	ENSGT00390000014827.b	ENSGT00940000158980	ENSGT00390000006394	ENSGT00940000160322	ENSGT00940000158578	ENSGT00940000160246.c.b	ENSGT00940000163364	ENSGT00940000156665.a	ENSGT00940000154194.c.a	ENSGT00940000164379.e.a	ENSGT00730000111223	ENSGT00940000167634	ENSGT00940000154518.a	ENSGT01050000244965.b	ENSGT00940000158366
Denticle herring	MODERN SPECIES	9	nudcd2 (ENSDCDG00000025985)	ccng1 (ENSDCDG00000025989)	septin8b (ENSDCDG00000026013)	sfxn1 (ENSDCDG00000027201)	ppp2caa (ENSDCDG00000027230)	si:ch1073-44g3.1 (ENSDCDG00000027232)	ENSDCDG00000027252	rnf20 (ENSDCDG00000028950)	ENSDCDG00000029831	prpf19 (ENSDCDG00000029834)	tcirg1b (ENSDCDG00000029916)	mcm7 (ENSDCDG00000030464)	ENSDCDG00000031128	COPS6 (ENSDCDG00000031129)	ENSDCDG00000005646	ENSDCDG00000005651 ##22	mrpl18 (ENSDCDG00000005660)	ENSDCDG00000005729	grhpra (ENSDCDG00000006140)	ENSDCDG00000006177	ENSDCDG00000006206	LINGO2 (ENSDCDG00000006364)	eif4ea (ENSDCDG00000006410)	adh5 (ENSDCDG00000006501)	gar1 (ENSDCDG00000006836)	adh5l (ENSDCDG00000006915)	pitx2 (ENSDCDG00000006978)	elovl6 (ENSDCDG00000007102)	egf (ENSDCDG00000007469)	lrit3a (ENSDCDG00000011442)	gpm6aa (ENSDCDG00000011461)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000182866.D.d.b ##22
Lamprey	DUPLICATION
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	53													ENSPMAG00000003181	ENSPMAG00000003187	ENSPMAG00000003193	ENSPMAG00000003200 ##22	ENSPMAG00000003204 ##22	ENSPMAG00000003206	ptp4a1 (ENSPMAG00000003213)
Lamprey	MODERN SPECIES	53												ENSPMAG00000003181	ENSPMAG00000003187	ENSPMAG00000003193	ENSPMAG00000003200 ##22	ENSPMAG00000003204 ##22	ENSPMAG00000003206	ptp4a1 (ENSPMAG00000003213)
Lamprey	DUPLICATION
Lamprey	DUPLICATION
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	3443																ENSPMAG00000005670 ##22
Lamprey	MODERN SPECIES	5172																ENSPMAG00000006692 ##22
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	2949																ENSPMAG00000003986 ##22	ENSPMAG00000003995
Lamprey	MODERN SPECIES	1753																ENSPMAG00000002372 ##22
Lamprey	MODERN SPECIES	5198																ENSPMAG00000006706 ##22
Ciona	DUPLICATION
Ciona	ANCESTRAL SPECIES	390																ENSGT00950000182866.D.a #22	ENSGT00940000163971.a.a.b.b	ENSGT00940000167337	ENSGT00390000017405
Ciona savignyi	MODERN SPECIES	40	ENSCSAVG00000008669	ENSCSAVG00000008674	ENSCSAVG00000008682	ENSCSAVG00000008688	ENSCSAVG00000008695	ENSCSAVG00000008699	ENSCSAVG00000008703	ENSCSAVG00000008706	ENSCSAVG00000008785	ENSCSAVG00000008790	ENSCSAVG00000008792	ENSCSAVG00000008795	ENSCSAVG00000008799	ENSCSAVG00000008804	ENSCSAVG00000008805	ENSCSAVG00000008809 #22	ENSCSAVG00000008818	ENSCSAVG00000008833	ENSCSAVG00000008837	ENSCSAVG00000008854	ENSCSAVG00000008904	ENSCSAVG00000008907	ENSCSAVG00000008912	ENSCSAVG00000008914	ENSCSAVG00000008915	ENSCSAVG00000008917	ENSCSAVG00000009002	ENSCSAVG00000009005	ENSCSAVG00000009013	ENSCSAVG00000009015	ENSCSAVG00000009018
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000005186	ENSCING00000020482	ENSCING00000024331	ENSCING00000018033	ENSCING00000025115	ENSCING00000021267	ENSCING00000022637	ENSCING00000018221	ENSCING00000019519	ENSCING00000020574	ENSCING00000024131	ENSCING00000023748	ENSCING00000022608	ENSCING00000020194	ENSCING00000023636 #22	ENSCING00000024958 #22	ENSCING00000018315	ENSCING00000024701	ENSCING00000023499	ENSCING00000023008	ENSCING00000018668	ENSCING00000021041	ENSCING00000024617	ENSCING00000024822	ENSCING00000021999	ENSCING00000018479	ENSCING00000022579	ENSCING00000008383	ENSCING00000020875	ENSCING00000024199	ENSCING00000018181
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.D.b #22
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000024199	ENSCING00000020875	ENSCING00000008383	ENSCING00000022579	ENSCING00000018479	ENSCING00000021999	ENSCING00000024822	ENSCING00000024617	ENSCING00000021041	ENSCING00000018668	ENSCING00000023008	ENSCING00000023499	ENSCING00000024701	ENSCING00000018315	ENSCING00000024958 #22	ENSCING00000023636 #22	ENSCING00000020194	ENSCING00000022608	ENSCING00000023748	ENSCING00000024131	ENSCING00000020574	ENSCING00000019519	ENSCING00000018221	ENSCING00000022637	ENSCING00000021267	ENSCING00000025115	ENSCING00000018033	ENSCING00000024331	ENSCING00000020482	ENSCING00000005186	ENSCING00000020910
Chordata	DUPLICATION
Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Ciona savignyi	MODERN SPECIES	175											ENSCSAVG00000002600	ENSCSAVG00000002599	ENSCSAVG00000002584	ENSCSAVG00000002580	ENSCSAVG00000002575	ENSCSAVG00000002572 ##22	ENSCSAVG00000002567	ENSCSAVG00000002561	ENSCSAVG00000002558	ENSCSAVG00000002481	ENSCSAVG00000002468	ENSCSAVG00000002456	ENSCSAVG00000002453	ENSCSAVG00000002448	ENSCSAVG00000002443	ENSCSAVG00000002438	ENSCSAVG00000002433	ENSCSAVG00000002432	ENSCSAVG00000002416
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00950000182866.A ##22
P. kingsleyae	MODERN SPECIES	27	zgc:91944 (ENSPKIG00000024418)	ENSPKIG00000024410	ENSPKIG00000024401	zbtb8b (ENSPKIG00000024392)	heyl (ENSPKIG00000024379)	fuca1.2 (ENSPKIG00000024361)	dlgap3 (ENSPKIG00000024338)	gjb9b (ENSPKIG00000024323)	ENSPKIG00000024315	ENSPKIG00000024135	angpt2b (ENSPKIG00000024068)	trappc3 (ENSPKIG00000024048)	ENSPKIG00000024037	col8a2 (ENSPKIG00000024023)	ptp4a2b (ENSPKIG00000023998)	ENSPKIG00000023977 ##22	ADGRB2 (ENSPKIG00000023738)	ENSPKIG00000023589	col9a2 (ENSPKIG00000023550)	smap2 (ENSPKIG00000023520)	rims3 (ENSPKIG00000023497)	nfyc (ENSPKIG00000023464)	KCNQ4 (ENSPKIG00000023405)	TINAGL1 (ENSPKIG00000023340)	bmp8a (ENSPKIG00000023298)	MACF1 (ENSPKIG00000023210)	ndufs5 (ENSPKIG00000023159)	rnf19b (ENSPKIG00000023127)	ak2 (ENSPKIG00000023102)	ZMYM4 (ENSPKIG00000023057)	sfpq (ENSPKIG00000023035)
Chordata	ANCESTRAL SPECIES																	ENSGT00950000182866.B ##22
Ciona	DUPLICATION
Ciona	DUPLICATION
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.B.a.a ##22
Ciona savignyi	DUPLICATION
Ciona savignyi	DUPLICATION
Ciona savignyi	DUPLICATION
Ciona savignyi	MODERN SPECIES	244	ENSCSAVG00000001305	ENSCSAVG00000001303	ENSCSAVG00000001301	ENSCSAVG00000001298	ENSCSAVG00000001139	ENSCSAVG00000001137	ENSCSAVG00000001133	ENSCSAVG00000001131	ENSCSAVG00000001128	ENSCSAVG00000001127	ENSCSAVG00000001125	ENSCSAVG00000001083	ENSCSAVG00000001075	ENSCSAVG00000001065	ENSCSAVG00000001061	ENSCSAVG00000001059 ##22	ENSCSAVG00000001057 ##22	ENSCSAVG00000001054 ##22	ENSCSAVG00000001051	ENSCSAVG00000001050	ENSCSAVG00000001049	ENSCSAVG00000001048	ENSCSAVG00000001041	ENSCSAVG00000001039	ENSCSAVG00000001038	ENSCSAVG00000001033	ENSCSAVG00000000803	ENSCSAVG00000000799	ENSCSAVG00000000784	ENSCSAVG00000000783	ENSCSAVG00000000782
Ciona savignyi	MODERN SPECIES	244	ENSCSAVG00000001301	ENSCSAVG00000001298	ENSCSAVG00000001139	ENSCSAVG00000001137	ENSCSAVG00000001133	ENSCSAVG00000001131	ENSCSAVG00000001128	ENSCSAVG00000001127	ENSCSAVG00000001125	ENSCSAVG00000001083	ENSCSAVG00000001075	ENSCSAVG00000001065	ENSCSAVG00000001061	ENSCSAVG00000001059 ##22	ENSCSAVG00000001057 ##22	ENSCSAVG00000001054 ##22	ENSCSAVG00000001051	ENSCSAVG00000001050	ENSCSAVG00000001049	ENSCSAVG00000001048	ENSCSAVG00000001041	ENSCSAVG00000001039	ENSCSAVG00000001038	ENSCSAVG00000001033	ENSCSAVG00000000803	ENSCSAVG00000000799	ENSCSAVG00000000784	ENSCSAVG00000000783	ENSCSAVG00000000782	ENSCSAVG00000000781	ENSCSAVG00000000777
Ciona savignyi	MODERN SPECIES	244	ENSCSAVG00000001303	ENSCSAVG00000001301	ENSCSAVG00000001298	ENSCSAVG00000001139	ENSCSAVG00000001137	ENSCSAVG00000001133	ENSCSAVG00000001131	ENSCSAVG00000001128	ENSCSAVG00000001127	ENSCSAVG00000001125	ENSCSAVG00000001083	ENSCSAVG00000001075	ENSCSAVG00000001065	ENSCSAVG00000001061	ENSCSAVG00000001059 ##22	ENSCSAVG00000001057 ##22	ENSCSAVG00000001054 ##22	ENSCSAVG00000001051	ENSCSAVG00000001050	ENSCSAVG00000001049	ENSCSAVG00000001048	ENSCSAVG00000001041	ENSCSAVG00000001039	ENSCSAVG00000001038	ENSCSAVG00000001033	ENSCSAVG00000000803	ENSCSAVG00000000799	ENSCSAVG00000000784	ENSCSAVG00000000783	ENSCSAVG00000000782	ENSCSAVG00000000781
Ciona savignyi	MODERN SPECIES	129	ENSCSAVG00000003095	ENSCSAVG00000003097	ENSCSAVG00000003101	ENSCSAVG00000003103	ENSCSAVG00000003118	ENSCSAVG00000003124	ENSCSAVG00000003140	ENSCSAVG00000003173	ENSCSAVG00000003308	ENSCSAVG00000003312	ENSCSAVG00000003395	ENSCSAVG00000003397	ENSCSAVG00000003400	ENSCSAVG00000003402	ENSCSAVG00000003409	ENSCSAVG00000003413 ##22	ENSCSAVG00000003415	ENSCSAVG00000003418	ENSCSAVG00000003420	ENSCSAVG00000003426	ENSCSAVG00000003437	ENSCSAVG00000003527	ENSCSAVG00000003532	ENSCSAVG00000004077	ENSCSAVG00000004090	ENSCSAVG00000004213	ENSCSAVG00000004226	ENSCSAVG00000004234	ENSCSAVG00000004266	ENSCSAVG00000004388	ENSCSAVG00000004396
Ciona intestinalis	DUPLICATION
Ciona intestinalis	MODERN SPECIES	182	ENSCING00000009817	ENSCING00000013414	ENSCING00000008681	ENSCING00000013413	ENSCING00000018963	ENSCING00000008678	ENSCING00000008677	ENSCING00000020823	ENSCING00000008676	ENSCING00000013412	ENSCING00000008675	ENSCING00000008674	ENSCING00000008673	ENSCING00000018469	ENSCING00000008658	ENSCING00000013411 ##22	ENSCING00000013409	ENSCING00000023741	ENSCING00000018285	ENSCING00000024317	ENSCING00000008650	ENSCING00000023276	ENSCING00000024049	ENSCING00000019205	ENSCING00000019489	ENSCING00000008655	ENSCING00000025152	ENSCING00000021750	ENSCING00000013407	ENSCING00000008649	ENSCING00000008648
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000023528	ENSCING00000018222	ENSCING00000023878	ENSCING00000022694	ENSCING00000022496	ENSCING00000024509	ENSCING00000018433	ENSCING00000002994	ENSCING00000010863	ENSCING00000024365	ENSCING00000023267	ENSCING00000019147	ci-zf(phd)-21 (ENSCING00000019847)	ENSCING00000022568	ENSCING00000021152	ENSCING00000003026 ##22	ENSCING00000024907	ENSCING00000003029	ENSCING00000003034	ENSCING00000020197	ENSCING00000021126	ENSCING00000010035	mlx (ENSCING00000019532)	ENSCING00000022966	ENSCING00000019444	ENSCING00000021823	ENSCING00000020453	ENSCING00000024382	ENSCING00000019680	ENSCING00000020939	ENSCING00000024498
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.B.a.b ##22
Ciona intestinalis	DUPLICATION
Ciona intestinalis	MODERN SPECIES		ENSCING00000024085	ENSCING00000021706	ENSCING00000019343	ENSCING00000020642	ENSCING00000005252	ENSCING00000005246	ENSCING00000025014	ENSCING00000005321	ENSCING00000005313	ENSCING00000005310	ENSCING00000005299	ENSCING00000005294	ENSCING00000022417	ENSCING00000005258	ENSCING00000005255	ENSCING00000018643 ##22	ENSCING00000005328	ENSCING00000005326	ENSCING00000025090	ENSCING00000023932	ENSCING00000013731	ENSCING00000023722	ENSCING00000002701	ENSCING00000023423	ENSCING00000003590	ENSCING00000023000	ENSCING00000013733	ENSCING00000010675	ENSCING00000018119	ENSCING00000003584	ENSCING00000022266
Ciona intestinalis	MODERN SPECIES	172	ENSCING00000009748	ENSCING00000009747	ENSCING00000009746	ENSCING00000001123	ENSCING00000024438	ENSCING00000009745	ENSCING00000023642	ENSCING00000009744	ENSCING00000018541	ENSCING00000014637	ENSCING00000000792	ENSCING00000024861	ENSCING00000014626	ENSCING00000000781	ENSCING00000023905	ENSCING00000014604 ##22	ENSCING00000014603	ENSCING00000014599	ENSCING00000000778	ENSCING00000014598	ENSCING00000014596	ENSCING00000018875	ENSCING00000007181	ENSCING00000014595	ENSCING00000007183	ENSCING00000010387	ENSCING00000007184	ENSCING00000020121	ENSCING00000007193	ENSCING00000007194	ENSCING00000007195
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.B.b ##22
Ciona intestinalis	MODERN SPECIES	13	ENSCING00000003399	ENSCING00000023051	ENSCING00000014317	ENSCING00000014316	ENSCING00000003409	ENSCING00000021650	ENSCING00000003422	ENSCING00000018207	ENSCING00000014314	ENSCING00000014315	ENSCING00000023430	ENSCING00000003448	ENSCING00000018933	ENSCING00000003439	ENSCING00000018011	ENSCING00000014313 ##22	ENSCING00000018141	ENSCING00000020519	ENSCING00000024869	ENSCING00000003456	ENSCING00000003453	ENSCING00000024218	ENSCING00000018847	ENSCING00000023881	ENSCING00000003460	ENSCING00000014312	ENSCING00000025044	ENSCING00000014311	ENSCING00000003471	ENSCING00000014307	ENSCING00000003467
Chordata	ANCESTRAL SPECIES																	ENSGT00950000182866.C ##22
Ciona	DUPLICATION
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.C.a ##22
Ciona intestinalis	DUPLICATION
Ciona intestinalis	DUPLICATION
Ciona intestinalis	DUPLICATION
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000021335	ENSCING00000022391	ENSCING00000021970	ENSCING00000022622	ENSCING00000019888	ENSCING00000024244	ENSCING00000023711	ENSCING00000009792	ENSCING00000019573	ENSCING00000018689	ENSCING00000021020	ENSCING00000021654	ENSCING00000023333	ENSCING00000009795	ENSCING00000024502	ENSCING00000018127 ##22	ENSCING00000019843	ENSCING00000023206	ENSCING00000020006	ENSCING00000020779	ENSCING00000023656	ENSCING00000023343	ENSCING00000018424	ENSCING00000022601	ENSCING00000023646	elo (ENSCING00000018495)	ENSCING00000022027	ENSCING00000022989	ENSCING00000024385	ENSCING00000018464	ENSCING00000023627
Ciona intestinalis	MODERN SPECIES		ENSCING00000009114	ENSCING00000013770	ENSCING00000018336	ENSCING00000013773	ENSCING00000004274	ENSCING00000022666	ENSCING00000022108	ENSCING00000021522	ENSCING00000022927	ENSCING00000018671	ENSCING00000023699	ENSCING00000004303	ENSCING00000004302	ENSCING00000024566	ENSCING00000004300	ENSCING00000013776 ##22	ENSCING00000022533	ENSCING00000023992	ENSCING00000004353	ENSCING00000004349	ENSCING00000004351	ENSCING00000020468	ENSCING00000010617	ENSCING00000013782	ENSCING00000018951	ENSCING00000024806	ENSCING00000013781	ENSCING00000023872	ENSCING00000004346	ENSCING00000018595	ENSCING00000013780
Ciona intestinalis	MODERN SPECIES	365																ENSCING00000001431 ##22
Ciona intestinalis	MODERN SPECIES	3	ENSCING00000003862	ENSCING00000024873	ENSCING00000018846	ENSCING00000022450	ENSCING00000003860	ENSCING00000023379	ENSCING00000003933	ENSCING00000014185	ENSCING00000014190	ENSCING00000003931	ENSCING00000022070	ENSCING00000021387	ENSCING00000003928	ENSCING00000003943	ENSCING00000014183	ENSCING00000014176 ##22	ENSCING00000014177	ENSCING00000025158	ENSCING00000010102	ENSCING00000014178	ENSCING00000020987	ENSCING00000018157	ENSCING00000014179	ENSCING00000010101	ENSCING00000014180	fhl1/2/3 (ENSCING00000003946)	ENSCING00000021541	ENSCING00000021812	pdedelta (ENSCING00000003961)	ENSCING00000018020	ENSCING00000003967
Ciona savignyi	DUPLICATION
Ciona savignyi	DUPLICATION
Ciona savignyi	MODERN SPECIES	240	ENSCSAVG00000009370	ENSCSAVG00000009375	ENSCSAVG00000009384	ENSCSAVG00000009388	ENSCSAVG00000009392	ENSCSAVG00000009395	ENSCSAVG00000009402	ENSCSAVG00000009403	ENSCSAVG00000009455	ENSCSAVG00000009459	ENSCSAVG00000009475	ENSCSAVG00000009477	ENSCSAVG00000009481	ENSCSAVG00000009482	ENSCSAVG00000009483	ENSCSAVG00000009484 ##22	ENSCSAVG00000009499	ENSCSAVG00000009502	ENSCSAVG00000009506	ENSCSAVG00000009826	ENSCSAVG00000009828	ENSCSAVG00000009830	ENSCSAVG00000009832	ENSCSAVG00000009834	ENSCSAVG00000009836	ENSCSAVG00000009954	ENSCSAVG00000009956	ENSCSAVG00000009958	ENSCSAVG00000009965	ENSCSAVG00000009960	ENSCSAVG00000009966
Ciona savignyi	MODERN SPECIES	240	ENSCSAVG00000007335	ENSCSAVG00000007333	ENSCSAVG00000007297	ENSCSAVG00000007277	ENSCSAVG00000007272	ENSCSAVG00000007270	ENSCSAVG00000007268	ENSCSAVG00000007265	ENSCSAVG00000007263	ENSCSAVG00000007258	ENSCSAVG00000007251	ENSCSAVG00000006829	ENSCSAVG00000006821	ENSCSAVG00000006410	ENSCSAVG00000006406	ENSCSAVG00000006387 ##22	ENSCSAVG00000006374	ENSCSAVG00000006371	ENSCSAVG00000006337	ENSCSAVG00000006320	ENSCSAVG00000006318	ENSCSAVG00000006317	ENSCSAVG00000006315	ENSCSAVG00000006240	ENSCSAVG00000006239	ENSCSAVG00000006088
Ciona savignyi	MODERN SPECIES	226														ENSCSAVG00000004569	ENSCSAVG00000004575	ENSCSAVG00000004610 ##22	ENSCSAVG00000004622	ENSCSAVG00000004694	ENSCSAVG00000004705
Ciona	ANCESTRAL SPECIES																	ENSGT00950000182866.C.b ##22
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000018883	ENSCING00000022043	ENSCING00000020990	ENSCING00000024886	ENSCING00000018094	ENSCING00000018436	ENSCING00000024142	ENSCING00000024711	ENSCING00000022366	ENSCING00000019963	ENSCING00000025183	ENSCING00000019155	ENSCING00000019384	ENSCING00000020744	ENSCING00000009770	ENSCING00000019967 ##22	ENSCING00000020772	ENSCING00000018731	ENSCING00000024662	ENSCING00000009774	ENSCING00000023815	ENSCING00000023678	ENSCING00000024016	ENSCING00000019852	ENSCING00000019458	ENSCING00000024581	ENSCING00000024141	ENSCING00000023247	ENSCING00000018513	ENSCING00000009959	ENSCING00000024664