Euteleostomi ANCESTRAL SPECIES 32 ENSGT00500000045005 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00970000196563 ENSGT00940000154936 ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00940000164592 ENSGT00940000164372 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00940000170353 Actinopterygii ANCESTRAL SPECIES 89 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00970000196563 ENSGT00940000154936 ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00940000164592 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00940000170353 ENSGT00940000160575 Neopterygii ANCESTRAL SPECIES 55 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000164851 ENSGT00940000159906 ENSGT00940000163670 ENSGT00940000153251.a ENSGT00940000156202.b ENSGT00940000162182 ENSGT00940000156371 ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647 ENSGT00390000014424 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000161261 ENSGT00390000002395 #34 ENSGT00940000158381 #31 Osteoglossocephalai ANCESTRAL SPECIES 99 ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558 #15 ENSGT00940000158013 #16 ENSGT00550000074787.d #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00940000161555 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000155647.bb ENSGT00390000014424 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000158381 #31 Clupeocephala ANCESTRAL SPECIES 175 ENSGT00940000165845.c.b ENSGT00940000156558.a.b ##15 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00940000161555 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00940000170353 ENSGT00940000160575 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 Euteleosteomorpha ANCESTRAL SPECIES 36 ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Protacanthopterygii ANCESTRAL SPECIES 55 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT01000000219382 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT01000000217346 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 ENSGT00940000160085 ENSGT00940000154103.a Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 431 ENSGT01000000219382 ENSGT00390000006207 #21 ENSGT00940000157443.d.b.b #22 ENSGT00940000157332.p #23 ENSGT00940000158530.x.a #24 ENSGT00940000157104.f #25 ENSGT00950000182962.a.a.d.a #26 ENSGT01060000248564.b.a.b.a.a #27 ENSGT00940000153284.a.mc.b.b #28 ENSGT00990000213281 #29 ENSGT00950000182922.b.g.a #30 ENSGT00940000158381.f #31 ENSGT00390000003643 #32 ENSGT00940000163955.v.b #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504.e #36 ENSGT00940000158713.d #37 Salmoninae_a ANCESTRAL SPECIES 32 ENSGT01030000234598.a.a.a.a.d #8 ENSGT00990000205902.a #9 ENSGT00940000159562 #10 ENSGT00940000155886.q #11 ENSGT00940000159661.k.b #12 ENSGT00530000063679.A.l #13 ENSGT00940000154110.b.b #14 ENSGT00940000156558.a.a.c #15 ENSGT00940000158013.n #16 ENSGT00550000074787.d.a.a.d #17 ENSGT00390000009110.a #18 ENSGT00390000015759.a #19 ENSGT00940000158810.c #20 ENSGT01000000219382 ENSGT00390000006207 #21 ENSGT00940000157443.d.b.b #22 ENSGT00940000157332.p #23 ENSGT00940000158530.x.a #24 ENSGT00940000157104.f #25 ENSGT00950000182962.a.a.d.a #26 ENSGT01060000248564.b.a.b.a.a #27 ENSGT00940000153284.a.mc.b.b #28 ENSGT00990000213281 #29 ENSGT00950000182922.b.g.a #30 ENSGT00940000158381.f #31 ENSGT00390000003643 #32 ENSGT00940000163955.v.b #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504.e #36 ENSGT00940000158713.d #37 Salmo ANCESTRAL SPECIES 3 ENSGT00940000160853.e #7 ENSGT01030000234598.a.a.a.a.d #8 ENSGT00990000205902.a #9 ENSGT00940000159562 #10 ENSGT00940000155886.q #11 ENSGT00940000159661.k.b #12 ENSGT00530000063679.A.l #13 ENSGT00940000154110.b.b #14 ENSGT00940000156558.a.a.c #15 ENSGT00940000158013.n #16 ENSGT00550000074787.d.a.a.d #17 ENSGT00390000009110.a #18 ENSGT00390000015759.a #19 ENSGT00940000158810.c #20 ENSGT00390000006207 #21 ENSGT00940000157443.d.b.b #22 ENSGT00940000157332.p #23 ENSGT00940000158530.x.a #24 ENSGT00940000157104.f #25 ENSGT00950000182962.a.a.d.a #26 ENSGT01060000248564.b.a.b.a.a #27 ENSGT00940000153284.a.mc.b.b #28 ENSGT00990000213281 #29 ENSGT00950000182922.b.g.a #30 ENSGT00940000158381.f #31 ENSGT00390000003643 #32 ENSGT00940000163955.v.b #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504.e #36 ENSGT00940000158713.d #37 Atlantic salmon MODERN SPECIES 10 map3k15 (ENSSSAG00000006435) #10 ENSSSAG00000008158 #11 drd3 (ENSSSAG00000008176) #12 ENSSSAG00000110103 qtrt2 (ENSSSAG00000008183) #13 ccdc191 (ENSSSAG00000008201) #14 ENSSSAG00000111365 zdhhc23b (ENSSSAG00000103173) #15 GRAMD1C (ENSSSAG00000008222) #16 ATP6V1A (ENSSSAG00000008233) #17 naa50 (ENSSSAG00000008252) #18 USF3 (ENSSSAG00000008268) #19 boc (ENSSSAG00000008286) #20 ENSSSAG00000109246 spice1 (ENSSSAG00000050613) #21 ENSSSAG00000101332 #22 ENSSSAG00000018631 #23 ENSSSAG00000084101 ENSSSAG00000087959 ##24 cdk8 (ENSSSAG00000010012) #25 wasf3b (ENSSSAG00000009965) #26 GPR12 (ENSSSAG00000083095) #27 usp12a (ENSSSAG00000009493) #28 ENSSSAG00000009950 #29 rpl21 (ENSSSAG00000009468) #30 lnx2 (ENSSSAG00000009424) #31 si:ch211-140b10.6 (ENSSSAG00000097523) #32 pdx1 (ENSSSAG00000085582) #33 urad (ENSSSAG00000105845) #34 ENSSSAG00000009390 #35 pan3 (ENSSSAG00000008395) #36 River trout MODERN SPECIES 11 and1 (ENSSTUG00000016052) adipoqa (ENSSTUG00000016043) TNK2 (ENSSTUG00000016035) #7 tfr1b (ENSSTUG00000015992) #8 ENSSTUG00000015981 #9 ENSSTUG00000015970 #10 drd3 (ENSSTUG00000015957) #12 qtrt2 (ENSSTUG00000015874) #13 ccdc191 (ENSSTUG00000015862) #14 zdhhc23b (ENSSTUG00000015857) #15 GRAMD1C (ENSSTUG00000015844) #16 ATP6V1A (ENSSTUG00000015817) #17 naa50 (ENSSTUG00000015763) #18 USF3 (ENSSTUG00000015751) #19 boc (ENSSTUG00000015721) #20 SHISA2 (ENSSTUG00000015716) #22 ATP8A2 (ENSSTUG00000014529) #23 rnf6 (ENSSTUG00000014495) #24 cdk8 (ENSSTUG00000014250) #25 wasf3b (ENSSTUG00000014223) #26 GPR12 (ENSSTUG00000014219) #27 usp12a (ENSSTUG00000013825) #28 rpl21 (ENSSTUG00000013811) #30 lnx2a (ENSSTUG00000013760) #31 si:ch211-140b10.6 (ENSSTUG00000013749) #32 pdx1 (ENSSTUG00000013746) #33 urad (ENSSTUG00000013742) #34 ENSSTUG00000013713 #35 pan3 (ENSSTUG00000012946) #36 ENSSTUG00000012900 #37 ENSSTUG00000012880 Oncorhynchus ANCESTRAL SPECIES 28 ENSGT00990000205902.a #9 ENSGT00940000159562 #10 ENSGT00940000155886.q #11 ENSGT00940000159661.k.b #12 ENSGT00530000063679.A.l #13 ENSGT01010000229730 ENSGT00940000154110.b.b #14 ENSGT00940000156558.a.a.c #15 ENSGT00940000158013.n #16 ENSGT00550000074787.d.a.a.d #17 ENSGT00390000009110.a #18 ENSGT00390000015759.a #19 ENSGT00940000158810.c #20 ENSGT01000000219382 ENSGT00390000006207 #21 ENSGT00940000157443.d.b.b #22 ENSGT00940000157332.p #23 ENSGT00940000158530.x.a #24 ENSGT00940000157104.f #25 ENSGT00950000182962.a.a.d.a #26 ENSGT01060000248564.b.a.b.a.a #27 ENSGT00940000153284.a.mc.b.b #28 ENSGT00990000213281 #29 ENSGT00950000182922.b.g.a #30 ENSGT00940000158381.f #31 ENSGT00390000003643 #32 ENSGT00940000163955.v.b #33 ENSGT00390000002395.f #34 ENSGT00940000167274 #35 ENSGT00390000001504.e #36 ENSGT00940000158713.d #37 Rainbow trout MODERN SPECIES 2 ccl20b (ENSOMYG00000040252) #9 ENSOMYG00000040243 #10 ENSOMYG00000040223 #11 ENSOMYG00000040199 #12 ENSOMYG00000072682 ENSOMYG00000040187 ENSOMYG00000012618 zdhhc23b (ENSOMYG00000040152) #15 GRAMD1C (ENSOMYG00000040123) #16 ATP6V1A (ENSOMYG00000040082) #17 naa50 (ENSOMYG00000040038) #18 USF3 (ENSOMYG00000040022) #19 boc (ENSOMYG00000040016) #20 ENSOMYG00000050986 spice1 (ENSOMYG00000039995) #21 ENSOMYG00000039991 #22 ENSOMYG00000071066 ENSOMYG00000038767 #23 rnf6 (ENSOMYG00000061514) #24 cdk8 (ENSOMYG00000037502) #25 wasf3b (ENSOMYG00000037357) #26 GPR12 (ENSOMYG00000037338) #27 ENSOMYG00000037326 #29 usp12a (ENSOMYG00000037286) #28 rpl21 (ENSOMYG00000037172) #30 lnx2a (ENSOMYG00000037222) #31 si:ch211-140b10.6 (ENSOMYG00000037205) #32 pdx1 (ENSOMYG00000037196) #33 urad (ENSOMYG00000037193) #34 ENSOMYG00000069972 #35 pan3 (ENSOMYG00000037139) #36 Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT01030000234598.a.a.a.a.d #8 ENSGT00990000205902.a #9 ENSGT00940000159562 #10 ENSGT00940000155886.q #11 ENSGT00940000159661.k.b #12 ENSGT00530000063679.A.l #13 ENSGT01010000229730 ENSGT00940000154110.b.b #14 ENSGT00940000156558.a.a.c #15 ENSGT00940000158013.n #16 ENSGT00550000074787.d.a.a.d #17 ENSGT00390000009110.a #18 ENSGT00390000015759.a #19 ENSGT00940000158810.c #20 ENSGT00390000006207 #21 ENSGT00940000157443.d.b.b #22 ENSGT00940000157332.p #23 ENSGT00940000158530.x.a #24 ENSGT00940000157104.f #25 ENSGT00950000182962.a.a.d.a #26 ENSGT01060000248564.b.a.b.a.a #27 ENSGT00940000153284.a.mc.b.b #28 ENSGT00990000213281 #29 ENSGT00950000182922.b.g.a #30 ENSGT00940000158381.f #31 ENSGT00390000003643 #32 ENSGT00940000163955.v.b #33 ENSGT00390000002395.f #34 ENSGT00940000167274 #35 ENSGT00390000001504.e #36 ENSGT00940000158713.d #37 Coho salmon MODERN SPECIES 9 ENSOKIG00005014874 #9 ENSOKIG00005014884 #10 ENSOKIG00005014891 #11 ENSOKIG00005014900 drd3 (ENSOKIG00005014903) #12 ENSOKIG00005014909 ENSOKIG00005014918 ccdc191 (ENSOKIG00005014926) #14 zdhhc23b (ENSOKIG00005014953) #15 GRAMD1C (ENSOKIG00005014963) #16 ATP6V1A (ENSOKIG00005014983) #17 naa50 (ENSOKIG00005015031) #18 USF3 (ENSOKIG00005015086) #19 boc (ENSOKIG00005015118) #20 spice1 (ENSOKIG00005015143) #21 SHISA2 (ENSOKIG00005015153) #22 ATP8A2 (ENSOKIG00005015472) #23 rnf6 (ENSOKIG00005020863) #24 cdk8 (ENSOKIG00005020908) #25 wasf3b (ENSOKIG00005021186) #26 GPR12 (ENSOKIG00005021209) #27 usp12a (ENSOKIG00005021255) #28 ENSOKIG00005021583 #29 rpl21 (ENSOKIG00005021604) #30 lnx2a (ENSOKIG00005021649) #31 si:ch211-140b10.6 (ENSOKIG00005021700) #32 pdx1 (ENSOKIG00005021708) #33 urad (ENSOKIG00005021716) #34 ENSOKIG00005021723 #35 pan3 (ENSOKIG00005021778) #36 flt1 (ENSOKIG00005021987) #37 Chinook salmon MODERN SPECIES 7 ENSOTSG00005016185 tfr1b (ENSOTSG00005016184) #8 ENSOTSG00005016181 #9 MAP3K15 (ENSOTSG00005016178) #10 ENSOTSG00005016175 #11 drd3 (ENSOTSG00005016174) #12 ENSOTSG00005016173 #13 ENSOTSG00005016171 zdhhc23b (ENSOTSG00005016169) #15 GRAMD1C (ENSOTSG00005016168) #16 ATP6V1A (ENSOTSG00005016154) #17 naa50 (ENSOTSG00005016056) #18 USF3 (ENSOTSG00005016054) #19 boc (ENSOTSG00005016049) #20 spice1 (ENSOTSG00005016047) #21 SHISA2 (ENSOTSG00005016045) #22 ATP8A2 (ENSOTSG00005004129) #23 rnf6 (ENSOTSG00005004051) #24 cdk8 (ENSOTSG00005003974) #25 wasf3b (ENSOTSG00005003959) #26 GPR12 (ENSOTSG00005003958) #27 ENSOTSG00005003954 ENSOTSG00005003952 #29 usp12a (ENSOTSG00005003930) #28 rpl21 (ENSOTSG00005003926) #30 lnx2a (ENSOTSG00005003923) #31 si:ch211-140b10.6 (ENSOTSG00005003918) #32 pdx1 (ENSOTSG00005003916) #33 urad (ENSOTSG00005003914) #34 ENSOTSG00005003910 pan3 (ENSOTSG00005002167) #36 Huchen MODERN SPECIES 622 ENSHHUG00000040208 MAP3K3 (ENSHHUG00000040212) ENSHHUG00000040228 gfap (ENSHHUG00000040235) kcnh6a (ENSHHUG00000040267) DCAF7 (ENSHHUG00000040287) ccdc47 (ENSHHUG00000040298) ENSHHUG00000040324 hsd3b7 (ENSHHUG00000040339) tbc1d10b (ENSHHUG00000040347) pheta2 (ENSHHUG00000040352) cd2bp2 (ENSHHUG00000040382) ENSHHUG00000040395 ENSHHUG00000040414 spice1 (ENSHHUG00000040421) #21 SHISA2 (ENSHHUG00000040440) #22 ATP8A2 (ENSHHUG00000040450) #23 rnf6 (ENSHHUG00000040719) #24 cdk8 (ENSHHUG00000040724) #25 wasf3b (ENSHHUG00000040996) #26 GPR12 (ENSHHUG00000041005) #27 usp12a (ENSHHUG00000041007) #28 ENSHHUG00000041092 #29 rpl21 (ENSHHUG00000041096) #30 lnx2a (ENSHHUG00000041120) #31 si:ch211-140b10.6 (ENSHHUG00000041125) #32 pdx1 (ENSHHUG00000041127) #33 urad (ENSHHUG00000041129) #34 ENSHHUG00000041131 #35 Salmoninae ANCESTRAL SPECIES 149 ENSGT00940000165845.c.a ENSGT00940000159661.k.a ##12 ENSGT00530000063679.A.k ##13 ENSGT00940000154110.b.a ##14 ENSGT00940000156558.a.a.d ##15 ENSGT00940000158013.m ##16 ENSGT00550000074787.d.a.a.c ##17 ENSGT00390000009110.b ##18 ENSGT00390000015759.b ##19 ENSGT00940000158810.d ##20 ENSGT00940000157443.d.b.a ##22 ENSGT00940000157332.o ##23 ENSGT00940000158530.x.b ##24 ENSGT00940000157104.e ##25 ENSGT00950000182962.a.a.d.b ##26 ENSGT01060000248564.b.a.b.a.b ##27 ENSGT00940000153284.a.mc.b.a ##28 ENSGT00950000182922.b.g.b ##30 ENSGT00940000155647.cb ENSGT00940000158381.e ##31 ENSGT00940000163955.v.a ##33 ENSGT00940000160575 ENSGT00390000001504.f ##36 ENSGT00940000158713.c ##37 ENSGT00940000154103.a.g ENSGT00940000154936.c.a Huchen MODERN SPECIES 5992 SHISA2 (ENSHHUG00000007116) ##22 Salmoninae_a ANCESTRAL SPECIES 35 ENSGT00940000160853.f ##7 ENSGT01030000234598.a.a.a.a.c ##8 ENSGT00990000205902.b.b ##9 ENSGT00990000205902.b.a ##9 ENSGT00940000155886.r ##11 ENSGT00940000165845.c.a ENSGT00940000159661.k.a ##12 ENSGT00530000063679.A.k ##13 ENSGT00940000154110.b.a ##14 ENSGT00940000156558.a.a.d ##15 ENSGT00940000158013.m ##16 ENSGT00550000074787.d.a.a.c ##17 ENSGT00390000009110.b ##18 ENSGT00390000015759.b ##19 ENSGT00940000158810.d ##20 ENSGT00940000157443.d.b.a ##22 ENSGT00940000157332.o ##23 ENSGT00940000158530.x.b ##24 ENSGT00940000157104.e ##25 ENSGT00950000182962.a.a.d.b ##26 ENSGT01060000248564.b.a.b.a.b ##27 ENSGT00940000153284.a.mc.b.a ##28 ENSGT00950000182922.b.g.b ##30 ENSGT00940000155647.cb ENSGT00940000158381.e ##31 ENSGT00940000163955.v.a ##33 ENSGT00940000160575 ENSGT00390000001504.f ##36 ENSGT00940000158713.c ##37 ENSGT00940000154103.a.g ENSGT00940000154936.c.a Oncorhynchus ANCESTRAL SPECIES 27 ENSGT01030000234598.a.a.a.a.c ##8 ENSGT00990000205902.b.b ##9 ENSGT00990000205902.b.a ##9 ENSGT00940000155886.r ##11 ENSGT00940000165845.c.a ENSGT00940000159661.l ##12 ENSGT00940000159661.k.a ##12 ENSGT00530000063679.A.k ##13 ENSGT00940000154110.b.a ##14 ENSGT00940000156558.a.a.d ##15 ENSGT00940000158013.m ##16 ENSGT00550000074787.d.a.a.c ##17 ENSGT00390000009110.b ##18 ENSGT00390000015759.b ##19 ENSGT00940000158810.d ##20 ENSGT00940000157443.d.b.a ##22 ENSGT00940000157332.o ##23 ENSGT00940000158530.x.b ##24 ENSGT00940000157104.e ##25 ENSGT00950000182962.a.a.d.b ##26 ENSGT01060000248564.b.a.b.a.b ##27 ENSGT00940000153284.a.mc.b.a ##28 ENSGT00950000182922.b.g.b ##30 ENSGT00940000155647.cb ENSGT00940000158381.e ##31 ENSGT00940000163955.v.a ##33 ENSGT00940000160575 ENSGT00390000001504.f ##36 ENSGT00940000158713.c ##37 ENSGT00940000154103.a.g ENSGT00940000176911 Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000160853.f ##7 ENSGT01030000234598.a.a.a.a.c ##8 ENSGT00990000205902.b.b ##9 ENSGT00940000155886.r ##11 ENSGT00940000165845.c.a ENSGT00940000159661.l ##12 ENSGT00940000159661.k.a ##12 ENSGT00530000063679.A.k ##13 ENSGT00940000154110.b.a ##14 ENSGT00940000156558.a.a.d ##15 ENSGT00940000158013.m ##16 ENSGT00550000074787.d.a.a.c ##17 ENSGT00390000009110.b ##18 ENSGT00390000015759.b ##19 ENSGT00940000158810.d ##20 ENSGT00940000157443.d.b.a ##22 ENSGT01010000229159 ENSGT00940000157332.o ##23 ENSGT00940000158530.x.b ##24 ENSGT00940000157104.e ##25 ENSGT00950000182962.a.a.d.b ##26 ENSGT01060000248564.b.a.b.a.b ##27 ENSGT00940000153284.a.mc.b.a ##28 ENSGT00950000182922.b.g.b ##30 ENSGT00940000155647.cb ENSGT00940000158381.e ##31 ENSGT00940000163955.v.a ##33 ENSGT00940000160575 ENSGT00390000001504.f ##36 ENSGT00940000158713.c ##37 ENSGT00940000154103.a.g Chinook salmon MODERN SPECIES 21 ARFGEF1 (ENSOTSG00005005074) cops5 (ENSOTSG00005005031) TCF24 (ENSOTSG00005005026) MCMDC2 (ENSOTSG00005005024) sgk3 (ENSOTSG00005003188) MYBL1 (ENSOTSG00005003173) rrs1 (ENSOTSG00005003165) crhb (ENSOTSG00005003161) trim55b (ENSOTSG00005003158) DNAJC5B (ENSOTSG00005003156) pde7a (ENSOTSG00005002984) mtfr1 (ENSOTSG00005002966) armc1 (ENSOTSG00005002958) ENSOTSG00005002903 bhlhe22 (ENSOTSG00005002618) SHISA2 (ENSOTSG00005012358) ##22 ENSOTSG00005012357 ENSOTSG00005012348 ##23 rnf6 (ENSOTSG00005012344) ##24 cdk8 (ENSOTSG00005011987) ##25 GPR12 (ENSOTSG00005011986) ##27 usp12a (ENSOTSG00005011681) ##28 RPL21 (ENSOTSG00005011679) ##30 gtf3ab (ENSOTSG00005011678) lnx2a (ENSOTSG00005011677) ##31 pdx1 (ENSOTSG00005011676) ##33 ENSOTSG00005011675 FLT3 (ENSOTSG00005011674) pan3 (ENSOTSG00005011665) ##36 ENSOTSG00005011663 flt1 (ENSOTSG00005011660) ##37 Coho salmon MODERN SPECIES 2 TNK2 (ENSOKIG00005010208) ##7 tfr1b (ENSOKIG00005010144) ##8 ENSOKIG00005010104 ##9 ENSOKIG00005010068 ##11 ENSOKIG00005010055 ENSOKIG00005010047 drd3 (ENSOKIG00005010039) ##12 qtrt2 (ENSOKIG00005010019) ##13 ccdc191 (ENSOKIG00005009975) ##14 zdhhc23b (ENSOKIG00005009963) ##15 GRAMD1C (ENSOKIG00005009950) ##16 ATP6V1A (ENSOKIG00005009915) ##17 naa50 (ENSOKIG00005009890) ##18 USF3 (ENSOKIG00005009877) ##19 boc (ENSOKIG00005009821) ##20 SHISA2 (ENSOKIG00005009806) ##22 ENSOKIG00005009778 ATP8A2 (ENSOKIG00005009001) ##23 rnf6 (ENSOKIG00005008927) ##24 cdk8 (ENSOKIG00005008750) ##25 wasf3b (ENSOKIG00005008718) ##26 GPR12 (ENSOKIG00005008710) ##27 usp12a (ENSOKIG00005008577) ##28 rpl21 (ENSOKIG00005008531) ##30 gtf3ab (ENSOKIG00005008478) lnx2a (ENSOKIG00005008419) ##31 pdx1 (ENSOKIG00005008402) ##33 FLT3 (ENSOKIG00005008384) PAN3 (ENSOKIG00005007837) ##36 FLT1 (ENSOKIG00005007728) ##37 ENSOKIG00005007717 Rainbow trout MODERN SPECIES 6 ENSOMYG00000059903 ##9 ENSOMYG00000010891 ##11 ENSOMYG00000010899 drd3 (ENSOMYG00000010925) ##12 ENSOMYG00000068589 qtrt2 (ENSOMYG00000010936) ##13 ccdc191 (ENSOMYG00000010946) ##14 zdhhc23b (ENSOMYG00000003663) ##15 GRAMD1C (ENSOMYG00000003575) ##16 ATP6V1A (ENSOMYG00000019036) ##17 ENSOMYG00000056390 naa50 (ENSOMYG00000018997) ##18 USF3 (ENSOMYG00000018979) ##19 boc (ENSOMYG00000018829) ##20 ENSOMYG00000057770 ENSOMYG00000018805 ##22 ENSOMYG00000013132 ##23 rnf6 (ENSOMYG00000012644) ##24 cdk8 (ENSOMYG00000012606) ##25 ENSOMYG00000065995 wasf3b (ENSOMYG00000012591) ##26 GPR12 (ENSOMYG00000070203) ##27 usp12a (ENSOMYG00000012558) ##28 rl21 (ENSOMYG00000012541) ##30 gtf3ab (ENSOMYG00000012526) lnx2a (ENSOMYG00000012512) ##31 pdx1 (ENSOMYG00000012510) ##33 ENSOMYG00000062335 PAN3 (ENSOMYG00000011351) ##36 FLT1 (ENSOMYG00000011130) ##37 ENSOMYG00000011054 Salmo ANCESTRAL SPECIES 34 ENSGT01100000263502.A.a.a.b.a.a ENSGT00940000160853.f ##7 ENSGT01030000234598.a.a.a.a.c ##8 ENSGT00990000205902.b.b ##9 ENSGT00940000155886.r ##11 ENSGT00940000165845.c.a ENSGT00940000159661.k.a ##12 ENSGT00530000063679.A.k ##13 ENSGT00940000154110.b.a ##14 ENSGT00940000156558.a.a.d ##15 ENSGT00940000158013.m ##16 ENSGT00550000074787.d.a.a.c ##17 ENSGT00390000009110.b ##18 ENSGT00390000015759.b ##19 ENSGT00940000158810.d ##20 ENSGT00940000157443.d.b.a ##22 ENSGT00940000157332.o ##23 ENSGT00940000158530.x.b ##24 ENSGT00940000157104.e ##25 ENSGT00950000182962.a.a.d.b ##26 ENSGT01060000248564.b.a.b.a.b ##27 ENSGT00940000153284.a.mc.b.a ##28 ENSGT00950000182922.b.g.b ##30 ENSGT00940000155647.cb ENSGT00940000158381.e ##31 ENSGT00940000163955.v.a ##33 ENSGT00940000160575 ENSGT00390000001504.f ##36 ENSGT00940000158713.c ##37 ENSGT00940000154103.a.g ENSGT00940000154936.c.a Atlantic salmon MODERN SPECIES 21 tfr1b (ENSSSAG00000116067) ##8 ENSSSAG00000103972 ##9 sh3k1 (ENSSSAG00000077089) ##11 ENSSSAG00000077086 ENSSSAG00000104226 drd3 (ENSSSAG00000077050) ##12 ENSSSAG00000120734 qtrt2 (ENSSSAG00000077043) ##13 ccdc191 (ENSSSAG00000077035) ##14 zdhhc23b (ENSSSAG00000095338) ##15 GRAMD1C (ENSSSAG00000077029) ##16 VATA (ENSSSAG00000077020) ##17 naa50 (ENSSSAG00000077013) ##18 USF3 (ENSSSAG00000099363) ##19 boc (ENSSSAG00000076978) ##20 ENSSSAG00000097118 ##22 ENSSSAG00000091684 ENSSSAG00000056659 ##23 cdk8 (ENSSSAG00000059349) ##25 wasf3b (ENSSSAG00000059960) ##26 GPR12 (ENSSSAG00000102702) ##27 rl21 (ENSSSAG00000060203) ##30 usp12 (ENSSSAG00000060005) ##28 gtf3ab (ENSSSAG00000060244) pdx1 (ENSSSAG00000095952) ##33 LNX2 (ENSSSAG00000060315) ##31 FLT3 (ENSSSAG00000060395) PAN3 (ENSSSAG00000060444) ##36 FLT1 (ENSSSAG00000065213) ##37 ENSSSAG00000056540 c1qtnf9 (ENSSSAG00000056526) River trout MODERN SPECIES 36 and1 (ENSSTUG00000039750) ENSSTUG00000039758 tfr1b (ENSSTUG00000039772) ##8 ENSSTUG00000039972 ##9 ENSSTUG00000040016 ##11 ENSSTUG00000040024 drd3 (ENSSTUG00000040051) ##12 qtrt2 (ENSSTUG00000040252) ##13 ccdc191 (ENSSTUG00000040269) ##14 zdhhc23b (ENSSTUG00000040288) ##15 GRAMD1C (ENSSTUG00000040299) ##16 ATP6V1A (ENSSTUG00000040322) ##17 naa50 (ENSSTUG00000040341) ##18 USF3 (ENSSTUG00000040423) ##19 boc (ENSSTUG00000040429) ##20 SHISA2 (ENSSTUG00000040604) ##22 ATP8A2 (ENSSTUG00000040768) ##23 rnf6 (ENSSTUG00000043621) ##24 cdk8 (ENSSTUG00000043636) ##25 wasf3b (ENSSTUG00000043812) ##26 GPR12 (ENSSTUG00000043821) ##27 usp12a (ENSSTUG00000043826) ##28 rpl21 (ENSSTUG00000043884) ##30 gtf3ab (ENSSTUG00000043892) lnx2a (ENSSTUG00000043910) ##31 pdx1 (ENSSTUG00000043933) ##33 flt1 (ENSSTUG00000043943) ##37 pan3 (ENSSTUG00000044065) ##36 SPATA13 (ENSSTUG00000044436) c1qtnf9 (ENSSTUG00000044470) ENSSTUG00000044476 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 107 ENSGT00940000176119 ENSGT00410000026585.b ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ENSGT00530000063666.b.db.g ENSGT00940000167353 ENSGT00940000164731.i ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ##15 ENSGT00550000074787.d.a.b.a ##17 ENSGT00940000157443.d.a.a ##22 ENSGT00950000182962.a.a.c.a ##26 ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT01030000234788 ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b.c ENSGT00940000158378.a ENSGT00940000159458.c ENSGT00940000158617.f ENSGT00940000154622.a.b.q.b ENSGT00390000015355.`b.a ENSGT00940000165282.b.a ENSGT00950000182950.A.g ENSGT00940000156931.f Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ENSGT00530000063666.b.db.g ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723 ENSGT00940000164430.a.b.a.f ENSGT00940000154826 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ##15 ENSGT00550000074787.d.a.b.a ##17 ENSGT00940000157443.d.a.a ##22 ENSGT00950000182962.a.a.c.a ##26 ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT01030000234788 ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b.c ENSGT00940000158378.a ENSGT00940000159458.c ENSGT00940000158617.f ENSGT00940000154622.a.b.q.b ENSGT00390000015355.`b.a ENSGT00940000165282.b.a ENSGT00950000182950.A.g ENSGT00940000156931.f Salmo ANCESTRAL SPECIES 18 ENSGT00950000182941.b.b.b.a.d.a ENSGT00390000008256.vd.b.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ENSGT00530000063666.b.db.g ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723 ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ##15 ENSGT00550000074787.d.a.b.a ##17 ENSGT00940000157443.d.a.a ##22 ENSGT00950000182962.a.a.c.a ##26 ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b.c ENSGT00940000158378.a ENSGT00940000159458.c ENSGT00940000158617.f ENSGT00940000154622.a.b.q.b ENSGT00390000015355.`b.a ENSGT00940000165282.b.a ENSGT00950000182950.A.g ENSGT00940000156931.f ENSGT00530000064262.pc.a.s Atlantic salmon MODERN SPECIES 23 IF1AX (ENSSSAG00000001669) RPS6KA3 (ENSSSAG00000001260) ENSSSAG00000110485 pdha1a (ENSSSAG00000000891) prdx4 (ENSSSAG00000000827) sat1 (ENSSSAG00000000816) ENSSSAG00000000794 apooa (ENSSSAG00000000804) ENSSSAG00000089798 LIPO (ENSSSAG00000000779) ENSSSAG00000004282 cst14b.1 (ENSSSAG00000000759) ENSSSAG00000000752 ENSSSAG00000000746 ##15 ENSSSAG00000000691 ##17 ENSSSAG00000000669 ##22 wasf3 (ENSSSAG00000000656) ##26 mtif3 (ENSSSAG00000000645) ENSSSAG00000000638 abhd10a (ENSSSAG00000000623) ENSSSAG00000000604 ENSSSAG00000100031 si:ch211-271b14.1 (ENSSSAG00000000481) b4galt4 (ENSSSAG00000000403) ENSSSAG00000000391 zbtb20 (ENSSSAG00000000377) ENSSSAG00000080912 ENSSSAG00000100491 ENSSSAG00000080868 CDC23 (ENSSSAG00000118468) KIF20A (ENSSSAG00000080811) River trout MODERN SPECIES 10 ENSSTUG00000004974 RPS6KA3 (ENSSTUG00000005081) prdx4 (ENSSTUG00000006186) pdha1a (ENSSTUG00000006251) sat1a.2 (ENSSTUG00000006418) apooa (ENSSTUG00000006457) ENSSTUG00000006545 ENSSTUG00000006552 ENSSTUG00000006558 zgc:153704 (ENSSTUG00000006566) ENSSTUG00000006593 ENSSTUG00000006600 ENSSTUG00000006609 zdhhc23a (ENSSTUG00000006620) ##15 ATP6V1A (ENSSTUG00000006639) ##17 ENSSTUG00000006875 ##22 ENSSTUG00000006884 ##26 mtif3 (ENSSTUG00000006915) ENSSTUG00000006920 abhd10a (ENSSTUG00000006931) ENSSTUG00000006969 si:ch211-271b14.1 (ENSSTUG00000006996) b4galt4 (ENSSTUG00000007167) ENSSTUG00000007180 zbtb20 (ENSSTUG00000007189) ENSSTUG00000007195 ugdh (ENSSTUG00000007213) ENSSTUG00000007247 ENSSTUG00000007252 cdc23 (ENSSTUG00000007263) kif20a (ENSSTUG00000007340) Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ENSGT00530000063666.b.db.g ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723.b ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ##15 ENSGT00550000074787.d.a.b.a ##17 ENSGT00940000157443.d.a.a ##22 ENSGT00950000182962.a.a.c.a ##26 ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT01030000234788 ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b.c ENSGT00940000158378.a ENSGT00940000159458.c ENSGT00940000158617.f ENSGT00940000154622.a.b.q.b ENSGT00390000015355.`b.a ENSGT00940000165282.b.a ENSGT00950000182950.A.g ENSGT00940000156931.f Rainbow trout MODERN SPECIES 1 ENSOMYG00000046261 ENSOMYG00000046451 ENSOMYG00000061963 prdx4 (ENSOMYG00000046477) sat1a.2 (ENSOMYG00000046499) apooa (ENSOMYG00000046512) ENSOMYG00000046534 ENSOMYG00000046539 zgc:153704 (ENSOMYG00000046553) ENSOMYG00000049093 ENSOMYG00000075578 ENSOMYG00000062831 ENSOMYG00000046568 ENSOMYG00000046574 ##15 ENSOMYG00000046593 ##17 ENSOMYG00000046614 ##22 ENSOMYG00000046622 ##26 mtif3 (ENSOMYG00000046628) ENSOMYG00000046632 abhd10a (ENSOMYG00000046638) ENSOMYG00000046650 si:ch211-271b14.1 (ENSOMYG00000046685) b4galt4 (ENSOMYG00000046722) ENSOMYG00000046728 zbtb20 (ENSOMYG00000046730) ENSOMYG00000046736 ENSOMYG00000046744 ENSOMYG00000046755 CDC23 (ENSOMYG00000046759) KIF20A (ENSOMYG00000046774) ENSOMYG00000023672 Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00390000008256.vd.a.b ENSGT00940000159370.f.a ENSGT00530000063174.a.l.k ENSGT00940000153430.a.a.j.a ENSGT00950000183121.b.b.b.b.x.c ENSGT00530000063666.b.db.g ENSGT00510000048637 ENSGT00940000167353 ENSGT00940000164731.i ENSGT01050000244868.c.b.d ENSGT01010000223723.b ENSGT00940000155717 ENSGT00940000165845.c.b ENSGT00940000156558.a.b.a ##15 ENSGT00550000074787.d.a.b.a ##17 ENSGT00940000157443.d.a.a ##22 ENSGT00950000182962.a.a.c.a ##26 ENSGT00390000014424.i ENSGT00940000156043.fb.a ENSGT00390000017765.a.c ENSGT01030000234788 ENSGT00940000159385.e.b ENSGT00940000153322.B.d.b.c ENSGT00940000158378.a ENSGT00940000159458.c ENSGT00940000158617.f ENSGT00940000154622.a.b.q.b ENSGT00390000015355.`b.a ENSGT00940000165282.b.a ENSGT00950000182950.A.g ENSGT00940000156931.f Chinook salmon MODERN SPECIES 23 si:ch211-114c12.2 (ENSOTSG00005009558) eif1axa (ENSOTSG00005009559) rps6ka3b (ENSOTSG00005009564) pdha1a (ENSOTSG00005009954) prdx4 (ENSOTSG00005009977) sat1a.2 (ENSOTSG00005009983) apooa (ENSOTSG00005009986) CXorf58 (ENSOTSG00005009988) ENSOTSG00005009990 zgc:153704 (ENSOTSG00005009991) ENSOTSG00005009992 cst14b.1 (ENSOTSG00005009993) ENSOTSG00005009994 ZDHHC23 (ENSOTSG00005009997) ##15 ATP6V1A (ENSOTSG00005009998) ##17 ENSOTSG00005010050 ##22 WASF3 (ENSOTSG00005010052) ##26 mtif3 (ENSOTSG00005010054) ENSOTSG00005010055 abhd10a (ENSOTSG00005010057) ENSOTSG00005010060 ENSOTSG00005010061 si:ch211-271b14.1 (ENSOTSG00005010064) b4galt4 (ENSOTSG00005010070) ENSOTSG00005010073 zbtb20 (ENSOTSG00005010076) ENSOTSG00005010078 ugdh (ENSOTSG00005010079) ENSOTSG00005010081 cdc23 (ENSOTSG00005010083) kif20a (ENSOTSG00005010087) Coho salmon MODERN SPECIES 20 ENSOKIG00005048187 map7d2a (ENSOKIG00005048175) eif1axa (ENSOKIG00005048152) RPS6KA3 (ENSOKIG00005045963) pdha1a (ENSOKIG00005045792) prdx4 (ENSOKIG00005045718) sat1a.2 (ENSOKIG00005045694) apooa (ENSOKIG00005045648) ENSOKIG00005045637 ENSOKIG00005045632 zgc:153704 (ENSOKIG00005045615) ENSOKIG00005045605 ENSOKIG00005045601 ZDHHC23 (ENSOKIG00005045595) ##15 ATP6V1A (ENSOKIG00005045458) ##17 ENSOKIG00005045430 ##22 ENSOKIG00005045427 ##26 ENSOKIG00005045413 mtif3 (ENSOKIG00005045400) abhd10a (ENSOKIG00005045369) ENSOKIG00005045354 ENSOKIG00005045348 si:ch211-271b14.1 (ENSOKIG00005045303) b4galt4 (ENSOKIG00005045277) ARHGAP31 (ENSOKIG00005045170) zbtb20 (ENSOKIG00005045161) ENSOKIG00005045146 ENSOKIG00005045114 ENSOKIG00005045108 cdc23 (ENSOKIG00005044943) kif20a (ENSOKIG00005044720) Salmoninae ANCESTRAL SPECIES 156 ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.a.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ENSGT00530000063666.b.db.h ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT01010000225766 ENSGT00940000156558.a.b.b ##15 ENSGT00550000074787.d.a.b.b ##17 ENSGT00940000157443.d.a.b ##22 ENSGT00950000182962.a.a.c.b ##26 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d ENSGT00940000164978.b.d ENSGT00940000160838 ENSGT00940000157596 ENSGT00940000158378.b ENSGT00940000159458.d ENSGT00940000160779 ENSGT00940000158617.e ENSGT00390000008142 Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.a.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ENSGT00530000063666.b.db.h ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00940000156558.a.b.b ##15 ENSGT00550000074787.d.a.b.b ##17 ENSGT00940000157443.d.a.b ##22 ENSGT00950000182962.a.a.c.b ##26 ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d ENSGT00940000164978.b.d ENSGT00940000160838 ENSGT00940000157596 ENSGT00940000158378.b ENSGT00940000159458.d ENSGT00940000160779 Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00390000004986.e ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ENSGT01000000220985 ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00940000156558.a.b.b ##15 ENSGT00550000074787.d.a.b.b ##17 ENSGT00940000157443.d.a.b ##22 ENSGT00950000182962.a.a.c.b ##26 ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d ENSGT00940000164978.b.d ENSGT00940000160838 ENSGT00940000157596 ENSGT00940000158378.b ENSGT00940000159458.d ENSGT00940000160779 Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00390000004986.e ENSGT00940000159028.i ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.b ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ENSGT01000000220985 ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00940000156558.a.b.b ##15 ENSGT00550000074787.d.a.b.b ##17 ENSGT00940000157443.d.a.b ##22 ENSGT00950000182962.a.a.c.b ##26 ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d ENSGT00940000164978.b.d ENSGT00940000160838 ENSGT00940000157596 ENSGT00940000158378.b ENSGT00940000159458.d ENSGT00940000160779 Chinook salmon MODERN SPECIES 26 ENSOTSG00005047077 ccdc82 (ENSOTSG00005047076) poglut3 (ENSOTSG00005047074) lipia (ENSOTSG00005047072) si:ch211-114c12.2 (ENSOTSG00005047071) eif1axa (ENSOTSG00005047069) ENSOTSG00005041602 pdha1a (ENSOTSG00005039201) prdx4 (ENSOTSG00005039157) sat1a.2 (ENSOTSG00005039134) ENSOTSG00005039132 ENSOTSG00005039129 zgc:153704 (ENSOTSG00005039127) zdhhc23a (ENSOTSG00005039124) ##15 ATP6V1A (ENSOTSG00005039067) ##17 ENSOTSG00005039065 ##22 ENSOTSG00005039063 ##26 ENSOTSG00005039062 GABRB3 (ENSOTSG00005039061) ENSOTSG00005039060 KCNA10 (ENSOTSG00005039057) ENSOTSG00005039056 ENSOTSG00005039054 gtf3aa (ENSOTSG00005039049) ENSOTSG00005039046 ENSOTSG00005039043 abhd10a (ENSOTSG00005039038) ENSOTSG00005039033 ENSOTSG00005039031 zgc:175280 (ENSOTSG00005037495) eif4e1b (ENSOTSG00005037491) Coho salmon MODERN SPECIES 21 ccdc82 (ENSOKIG00005047248) poglut3 (ENSOKIG00005047223) LIPH (ENSOKIG00005047196) si:ch211-114c12.2 (ENSOKIG00005047179) map7d2a (ENSOKIG00005047166) eif1axa (ENSOKIG00005047158) RPS6KA3 (ENSOKIG00005040075) pdha1a (ENSOKIG00005038589) prdx4 (ENSOKIG00005038438) sat1a.2 (ENSOKIG00005038406) ENSOKIG00005038382 ENSOKIG00005038372 ENSOKIG00005038347 zdhhc23a (ENSOKIG00005038336) ##15 ATP6V1A (ENSOKIG00005038291) ##17 ENSOKIG00005038279 ##22 ENSOKIG00005038260 ##26 ENSOKIG00005049539 ENSOKIG00005049534 ENSOKIG00005049532 ENSOKIG00005049529 ENSOKIG00005049527 GTF3A (ENSOKIG00005049517) ENSOKIG00005049510 abhd10a (ENSOKIG00005049497) ENSOKIG00005049484 si:ch211-271b14.1 (ENSOKIG00005049471) zgc:175280 (ENSOKIG00005049407) eif4e1b (ENSOKIG00005049400) CASR (ENSOKIG00005049396) b4galt4 (ENSOKIG00005049393) Rainbow trout MODERN SPECIES 364 ENSOMYG00000045031 ENSOMYG00000045045 ENSOMYG00000062398 ENSOMYG00000059861 ENSOMYG00000045061 ENSOMYG00000045445 ENSOMYG00000047174 prdx4 (ENSOMYG00000047262) sat1a.2 (ENSOMYG00000047281) ENSOMYG00000047283 ENSOMYG00000047287 cpi1 (ENSOMYG00000047292) ENSOMYG00000065609 ENSOMYG00000047295 ##15 ENSOMYG00000047313 ##17 ENSOMYG00000061723 ##22 ENSOMYG00000047324 ##26 ENSOMYG00000073889 gtf3aa (ENSOMYG00000047332) ENSOMYG00000047338 abhd10a (ENSOMYG00000073441) ENSOMYG00000050600 ENSOMYG00000047343 si:ch211-271b14.1 (ENSOMYG00000047346) zgc:175280 (ENSOMYG00000047388) eif4e1b (ENSOMYG00000047417) ENSOMYG00000047418 b4galt4 (ENSOMYG00000047423) ENSOMYG00000047435 ENSOMYG00000047439 ENSOMYG00000070462 Salmo ANCESTRAL SPECIES 1 ENSGT00940000156285.ac ENSGT00410000026585.a ENSGT00950000182941.b.b.b.a.d.b.a.a ENSGT00390000008256.vd.a.a ENSGT00940000159370.f.b ENSGT00530000063174.a.l.l ENSGT00940000153430.a.a.j.b ENSGT00950000183121.b.b.b.b.x.d ENSGT00530000063666.b.db.h ENSGT00940000164731.j ENSGT01050000244868.c.b.c ENSGT00990000214106 ENSGT01010000225766 ENSGT00940000156558.a.b.b ##15 ENSGT00550000074787.d.a.b.b ##17 ENSGT00940000157443.d.a.b ##22 ENSGT00950000182962.a.a.c.b ##26 ENSGT01100000265679 ENSGT00990000208548 ENSGT00940000155647.bb ENSGT00390000014424.j ENSGT00940000156043.fb.b ENSGT00390000017765.a.d ENSGT00940000159385.e.a ENSGT00940000153322.B.d.b.d ENSGT00940000164978.b.d ENSGT00940000160838 ENSGT00940000157596 ENSGT00940000158378.b ENSGT00940000159458.d ENSGT00940000160779 River trout MODERN SPECIES 3 map7d2a (ENSSTUG00000043021) ENSSTUG00000043071 eif1axa (ENSSTUG00000043090) RPS6KA3 (ENSSTUG00000043357) pdha1a (ENSSTUG00000047190) prdx4 (ENSSTUG00000047727) sat1a.2 (ENSSTUG00000047743) apooa (ENSSTUG00000047753) ENSSTUG00000047838 ENSSTUG00000047841 zgc:153704 (ENSSTUG00000047848) ENSSTUG00000047884 ENSSTUG00000047893 ZDHHC23 (ENSSTUG00000047902) ##15 ATP6V1A (ENSSTUG00000047912) ##17 ENSSTUG00000047947 ##22 WASF3 (ENSSTUG00000047954) ##26 ENSSTUG00000047969 ENSSTUG00000047980 gtf3aa (ENSSTUG00000047984) mtif3 (ENSSTUG00000048009) ENSSTUG00000048017 abhd10a (ENSSTUG00000048028) ENSSTUG00000048033 si:ch211-271b14.1 (ENSSTUG00000048037) zgc:175280 (ENSSTUG00000048053) eif4e1b (ENSSTUG00000048092) CASR (ENSSTUG00000048102) b4galt4 (ENSSTUG00000048115) ENSSTUG00000048121 ENSSTUG00000048124 Huchen MODERN SPECIES 1542 lipia (ENSHHUG00000032179) si:ch211-114c12.2 (ENSHHUG00000032218) ENSHHUG00000032228 ENSHHUG00000032233 eif1axa (ENSHHUG00000032245) RPS6KA3 (ENSHHUG00000032411) pdha1a (ENSHHUG00000033718) prdx4 (ENSHHUG00000033768) sat1a.2 (ENSHHUG00000033862) apooa (ENSHHUG00000033890) ENSHHUG00000033915 zgc:153704 (ENSHHUG00000033952) ENSHHUG00000033967 ZDHHC23 (ENSHHUG00000033976) ##15 ATP6V1A (ENSHHUG00000033987) ##17 ENSHHUG00000034051 ##22 WASF3 (ENSHHUG00000034052) ##26 gtf3aa (ENSHHUG00000034069) mtif3 (ENSHHUG00000034079) Salmoninae ANCESTRAL SPECIES 38 ENSGT00940000162488.b.a.b ENSGT00950000183107.a.b.b.q.a ENSGT00940000156017.eb.a.b ENSGT00390000011425.A.d ENSGT00940000164237.g ENSGT00530000063666.a.gb ENSGT01050000244888.b.a.c.a.b ENSGT00940000155920.l ENSGT01030000234566.e.b.b.b.a ENSGT00940000157297.n.b ENSGT00940000159803.n ENSGT00940000154103.b.f ENSGT00530000063529.B.a ENSGT00940000153902.b.a.b ENSGT00940000162717.b ENSGT00940000157443.c ##22 ENSGT00940000159316.xb.a ENSGT00390000014785 ENSGT01090000260082.d.a.a.d.d ENSGT00530000063529.B.b ENSGT00940000153902.b.a.a ENSGT00940000162717.a ENSGT00940000159316.xb.b ENSGT00990000212008 ENSGT01090000260082.d.a.a.d.c ENSGT00940000166318.b ENSGT00940000154633.jd ENSGT00940000153259.a.a.a.c ENSGT00940000155516.u.c ENSGT00940000160157.l ENSGT00940000153168.A.g Salmoninae_a ANCESTRAL SPECIES 24 ENSGT00940000162488.b.a.b ENSGT00950000183107.a.b.b.q.a ENSGT00940000156017.eb.a.b ENSGT00390000011425.A.d ENSGT00940000164237.g ENSGT00530000063666.a.gb ENSGT01050000244888.b.a.c.a.b ENSGT00940000155920.l ENSGT01030000234566.e.b.b.b.a ENSGT00940000157297.n.b ENSGT00940000159803.n ENSGT00940000154103.b.f ENSGT00530000063529.B.a ENSGT00940000153902.b.a.b ENSGT00940000162717.b ENSGT00940000157443.c ##22 ENSGT00940000159316.xb.a ENSGT00390000014785 ENSGT01090000260082.d.a.a.d.d ENSGT00940000153259.a.a.a.d ENSGT00940000155516.u.d ENSGT00940000160157.k ENSGT00940000153168.A.h ENSGT00950000183061.a.a.a.a.b.e ENSGT00940000167491.e ENSGT00390000002197 ENSGT00940000160128.cb.b ENSGT00940000161362.d ENSGT00730000111220.m.a.b ENSGT00940000165703.f ENSGT00390000002414.`c Oncorhynchus ANCESTRAL SPECIES 21 ENSGT00950000182832.D.b.gc ENSGT00940000162488.b.a.b ENSGT00950000183107.a.b.b.q.a ENSGT00940000156017.eb.a.b ENSGT00390000011425.A.d ENSGT00940000164237.g ENSGT00530000063666.a.gb ENSGT01050000244888.b.a.c.a.b ENSGT00940000155920.l ENSGT01030000234566.e.b.b.b.a ENSGT00940000157297.n.b ENSGT00940000159803.n ENSGT00940000154103.b.f ENSGT00530000063529.B.a ENSGT00940000162717.b ENSGT00940000157443.c ##22 ENSGT00940000159316.xb.a ENSGT00390000014785 ENSGT01090000260082.d.a.a.d.d ENSGT00940000153259.a.a.a.d ENSGT00940000155516.u.d ENSGT00940000160157.k ENSGT00940000153168.A.h ENSGT00950000183061.a.a.a.a.b.e ENSGT00940000167491.e ENSGT00390000002197 ENSGT00940000160128.cb.b ENSGT00940000161362.d ENSGT00730000111220.m.a.b ENSGT00940000165703.f ENSGT00390000002414.`c Oncorhynchus_a ANCESTRAL SPECIES 19 ENSGT00950000182832.D.b.gc ENSGT00940000162488.b.a.b ENSGT00950000183107.a.b.b.q.a ENSGT00940000156017.eb.a.b ENSGT00390000011425.A.d ENSGT00940000164237.g ENSGT00530000063666.a.gb ENSGT01050000244888.b.a.c.a.b ENSGT00940000155920.l ENSGT01030000234566.e.b.b.b.a ENSGT00940000157297.n.b ENSGT00940000159803.n ENSGT00940000154103.b.f ENSGT00530000063529.B.a ENSGT00940000162717.b ENSGT00940000157443.c ##22 ENSGT00940000159316.xb.a ENSGT00390000014785 ENSGT01090000260082.d.a.a.d.d ENSGT00940000153259.a.a.a.d ENSGT00940000155516.u.d ENSGT00940000160157.k ENSGT00940000153168.A.h ENSGT00950000183061.a.a.a.a.b.e ENSGT00940000167491.e ENSGT00390000002197 ENSGT00940000160128.cb.b ENSGT00940000161362.d ENSGT00730000111220.m.a.b ENSGT00940000165703.f ENSGT00390000002414.`c Chinook salmon MODERN SPECIES 33 chmp1b (ENSOTSG00005012087) TENT5D (ENSOTSG00005012086) BRWD3 (ENSOTSG00005009448) sh3bgrl (ENSOTSG00005009441) ENSOTSG00005009440 ENSOTSG00005009267 apool (ENSOTSG00005009261) agtr2 (ENSOTSG00005009260) ENSOTSG00005009258 ENSOTSG00005009257 TENM1 (ENSOTSG00005001397) smarca1 (ENSOTSG00005001182) ENSOTSG00005001142 arhgef9b (ENSOTSG00005001039) amer1 (ENSOTSG00005001140) shisa2a (ENSOTSG00005027737) ##22 ZC3H12B (ENSOTSG00005027736) las1l (ENSOTSG00005027734) msna (ENSOTSG00005024574) ENSOTSG00005024567 AR (ENSOTSG00005022912) OPHN1 (ENSOTSG00005022876) yipf6 (ENSOTSG00005022875) stard8 (ENSOTSG00005022853) ENSOTSG00005022844 steep1 (ENSOTSG00005022840) efnb1 (ENSOTSG00005022838) nalf2 (ENSOTSG00005022835) eda (ENSOTSG00005022834) wnt11f2 (ENSOTSG00005022813) igbp1 (ENSOTSG00005022810) Coho salmon MODERN SPECIES 26 ENSOKIG00005050517 rraga (ENSOKIG00005050509) CHMP1B (ENSOKIG00005050507) TENT5D (ENSOKIG00005050501) BRWD3 (ENSOKIG00005050476) SH3BGRL (ENSOKIG00005050429) ENSOKIG00005050425 ENSOKIG00005050392 sh2d1aa (ENSOKIG00005050371) TENM1 (ENSOKIG00005050305) smarca1 (ENSOKIG00005050230) ENSOKIG00005050220 ARHGEF9 (ENSOKIG00005050164) amer1 (ENSOKIG00005050127) ENSOKIG00005050122 shisa2a (ENSOKIG00005050119) ##22 ZC3H12B (ENSOKIG00005050116) las1l (ENSOKIG00005050112) msna (ENSOKIG00005049926) ENSOKIG00005049862 AR (ENSOKIG00005049803) OPHN1 (ENSOKIG00005049718) yipf6 (ENSOKIG00005049682) stard8 (ENSOKIG00005049609) ENSOKIG00005049585 steep1 (ENSOKIG00005049579) efnb1 (ENSOKIG00005049576) nalf2 (ENSOKIG00005049571) eda (ENSOKIG00005049565) wnt11f2 (ENSOKIG00005049552) igbp1 (ENSOKIG00005049547) Rainbow trout MODERN SPECIES 3 ENSOMYG00000046780 ENSOMYG00000056162 ENSOMYG00000046683 ENSOMYG00000046589 ENSOMYG00000046585 ENSOMYG00000061248 ENSOMYG00000046525 ENSOMYG00000046480 sh2d1aa (ENSOMYG00000046467) ENSOMYG00000046369 smarca1 (ENSOMYG00000046282) ENSOMYG00000046228 ARHGEF9 (ENSOMYG00000046205) amer1 (ENSOMYG00000077734) ENSOMYG00000046183 shisa2a (ENSOMYG00000046179) ##22 ZC3H12B (ENSOMYG00000046170) las1l (ENSOMYG00000046160) msna (ENSOMYG00000046003) ENSOMYG00000045960 ENSOMYG00000061616 ar-alpha (ENSOMYG00000045899) OPHN1 (ENSOMYG00000045852) yipf6 (ENSOMYG00000045826) stard8 (ENSOMYG00000045742) ENSOMYG00000045703 steep1 (ENSOMYG00000045693) efnb1 (ENSOMYG00000045686) nalf2 (ENSOMYG00000045683) eda (ENSOMYG00000045676) wnt11f2 (ENSOMYG00000045673) Salmo ANCESTRAL SPECIES 13 ENSGT00950000182832.D.b.gc ENSGT00940000162488.b.a.b ENSGT00950000183107.a.b.b.q.a ENSGT00940000156017.eb.a.b ENSGT00390000011425.A.d ENSGT00940000164237.g ENSGT00530000063666.a.gb ENSGT01050000244888.b.a.c.a.b ENSGT00940000155920.l ENSGT01030000234566.e.b.b.b.a ENSGT00940000157297.n.b ENSGT00940000159803.n ENSGT00940000154103.b.f ENSGT00530000063529.B.a ENSGT00940000153902.b.a.b ENSGT00940000157443.c ##22 ENSGT00940000159316.xb.a ENSGT00390000014785 ENSGT01090000260082.d.a.a.d.d ENSGT00940000154336.qd ENSGT00940000153259.a.a.a.d ENSGT00940000155516.u.d ENSGT00940000160157.k ENSGT00940000153168.A.h ENSGT00950000183061.a.a.a.a.b.e ENSGT00940000167491.e ENSGT00390000002197 ENSGT00940000160128.cb.b ENSGT00940000161362.d ENSGT00730000111220.m.a.b ENSGT00940000165703.f Atlantic salmon MODERN SPECIES 4 ENSSSAG00000008058 ENSSSAG00000008096 ENSSSAG00000008163 ENSSSAG00000084290 ENSSSAG00000009395 ENSSSAG00000009423 ENSSSAG00000009440 ENSSSAG00000101359 ENSSSAG00000009461 sh2d1aa (ENSSSAG00000117384) ENSSSAG00000009842 smarca1 (ENSSSAG00000054210) ENSSSAG00000061847 amer1 (ENSSSAG00000062015) asb12a (ENSSSAG00000064122) shisa2a (ENSSSAG00000082270) ##22 ENSSSAG00000064131 msna (ENSSSAG00000064191) las1l (ENSSSAG00000064124) ENSSSAG00000088132 ENSSSAG00000068330 AR (ENSSSAG00000068362) OPHN1 (ENSSSAG00000068742) yipf6 (ENSSSAG00000094250) stard8 (ENSSSAG00000068960) ENSSSAG00000069093 steep1 (ENSSSAG00000069098) efnb1 (ENSSSAG00000069107) nalf2 (ENSSSAG00000095500) eda (ENSSSAG00000099661) wnt11f2 (ENSSSAG00000108560) River trout MODERN SPECIES 6 TENT5D (ENSSTUG00000022443) BRWD3 (ENSSTUG00000022462) sh3bgrl (ENSSTUG00000023208) ENSSTUG00000023305 ENSSTUG00000023313 apool (ENSSTUG00000023431) agtr2 (ENSSTUG00000023443) sh2d1aa (ENSSTUG00000023451) TENM1 (ENSSTUG00000023466) smarca1 (ENSSTUG00000023581) ENSSTUG00000023870 ARHGEF9 (ENSSTUG00000023916) amer1 (ENSSTUG00000024872) asb12a (ENSSTUG00000024880) ENSSTUG00000024883 shisa2a (ENSSTUG00000024888) ##22 ZC3H12B (ENSSTUG00000024895) las1l (ENSSTUG00000024915) msna (ENSSTUG00000024984) ENSSTUG00000028290 ENSSTUG00000028322 AR (ENSSTUG00000028332) OPHN1 (ENSSTUG00000028431) yipf6 (ENSSTUG00000028600) stard8 (ENSSTUG00000028653) ENSSTUG00000029068 steep1 (ENSSTUG00000029085) efnb1 (ENSSTUG00000002656) nalf2 (ENSSTUG00000002670) eda (ENSSTUG00000002679) wnt11f2 (ENSSTUG00000002694) Huchen MODERN SPECIES 2 ENSHHUG00000017069 sh3bgrl (ENSHHUG00000016983) ENSHHUG00000016979 ENSHHUG00000016976 ENSHHUG00000016973 ENSHHUG00000016969 ENSHHUG00000016965 ENSHHUG00000016955 sh2d1aa (ENSHHUG00000016945) TENM1 (ENSHHUG00000016311) smarca1 (ENSHHUG00000016236) ENSHHUG00000016217 ARHGEF9 (ENSHHUG00000016097) amer1 (ENSHHUG00000016089) mtmr8 (ENSHHUG00000016052) shisa2a (ENSHHUG00000016042) ##22 ZC3H12B (ENSHHUG00000016031) las1l (ENSHHUG00000016010) msna (ENSHHUG00000013827) ENSHHUG00000013809 ENSHHUG00000013800 ENSHHUG00000013779 AR (ENSHHUG00000013567) OPHN1 (ENSHHUG00000013514) yipf6 (ENSHHUG00000013495) stard8 (ENSHHUG00000013087) ENSHHUG00000013073 steep1 (ENSHHUG00000013055) efnb1 (ENSHHUG00000013043) nalf2 (ENSHHUG00000013037) eda (ENSHHUG00000013033) Northern pike DUPLICATION Northern pike MODERN SPECIES 6 lipia (ENSELUG00000020969) si:ch211-114c12.2 (ENSELUG00000020973) map7d2a (ENSELUG00000020985) IF1AX (ENSELUG00000027786) RPS6KA3 (ENSELUG00000021143) pdha1a (ENSELUG00000021178) prdx4 (ENSELUG00000021240) sat1a.2 (ENSELUG00000021271) apooa (ENSELUG00000028327) ENSELUG00000021334 ENSELUG00000021341 zgc:153704 (ENSELUG00000021361) ENSELUG00000021414 ZDHHC23 (ENSELUG00000021421) ##15 ATP6V1A (ENSELUG00000021440) ##17 ENSELUG00000026117 #22 ENSELUG00000021472 ##26 gtf3aa (ENSELUG00000021503) mtif3 (ENSELUG00000021487) ENSELUG00000000941 abhd10a (ENSELUG00000021523) ENSELUG00000021532 ENSELUG00000021549 si:ch211-271b14.1 (ENSELUG00000021651) zgc:175280 (ENSELUG00000021687) eif4e1b (ENSELUG00000021695) CASR (ENSELUG00000021743) b4galt4 (ENSELUG00000021758) ARHGAP31 (ENSELUG00000021774) UPK1B (ENSELUG00000021800) zbtb20 (ENSELUG00000021834) Northern pike MODERN SPECIES 20 ENSELUG00000013185 #9 MAP3K15 (ENSELUG00000013343) #10 ENSELUG00000013433 #11 ENSELUG00000013449 drd3 (ENSELUG00000013460) #12 qtrt2 (ENSELUG00000013496) #13 ccdc191 (ENSELUG00000013546) #14 zdhhc23b (ENSELUG00000013562) #15 GRAMD1C (ENSELUG00000013577) #16 ATP6V1A (ENSELUG00000013615) #17 naa50 (ENSELUG00000013657) #18 USF3 (ENSELUG00000013708) #19 boc (ENSELUG00000013746) #20 ENSELUG00000030548 spice1 (ENSELUG00000013826) #21 SHISA2 (ENSELUG00000013867) #22 ATP8A2 (ENSELUG00000013910) #23 rnf6 (ENSELUG00000013920) #24 cdk8 (ENSELUG00000013968) #25 wasf3b (ENSELUG00000014003) #26 GPR12 (ENSELUG00000014012) #27 usp12a (ENSELUG00000014044) #28 rpl21 (ENSELUG00000014073) #30 gtf3ab (ENSELUG00000014083) lnx2a (ENSELUG00000014124) #31 si:ch211-140b10.6 (ENSELUG00000033004) #32 pdx1 (ENSELUG00000030047) #33 ENSELUG00000014152 urad (ENSELUG00000014158) #34 ENSELUG00000014227 #35 ENSELUG00000029905 Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Percomorphaceae ANCESTRAL SPECIES 24 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Tiger tail seahorse MODERN SPECIES 133 oxsr1b (ENSHCOG00000018635) myd88 (ENSHCOG00000018605) cry-dash (ENSHCOG00000018600) slc22a13b (ENSHCOG00000018571) slc22a13b (ENSHCOG00000018556) drd3 (ENSHCOG00000018515) #12 qtrt2 (ENSHCOG00000018359) #13 ccdc191 (ENSHCOG00000018348) #14 ZDHHC23 (ENSHCOG00000018315) ##15 GRAMD1C (ENSHCOG00000018304) #16 ATP6V1A (ENSHCOG00000018290) #17 naa50 (ENSHCOG00000018247) #18 USF3 (ENSHCOG00000018223) #19 boc (ENSHCOG00000018203) #20 spice1 (ENSHCOG00000018156) #21 SHISA2 (ENSHCOG00000018152) #22 ATP8A2 (ENSHCOG00000018135) #23 rnf6 (ENSHCOG00000018062) #24 cdk8 (ENSHCOG00000018055) #25 wasf3b (ENSHCOG00000017979) #26 GPR12 (ENSHCOG00000017963) #27 usp12a (ENSHCOG00000017948) #28 rpl21 (ENSHCOG00000017908) #30 gtf3ab (ENSHCOG00000017879) lnx2a (ENSHCOG00000017861) #31 si:ch211-140b10.6 (ENSHCOG00000017786) #32 pdx1 (ENSHCOG00000017782) #33 ENSHCOG00000000481 #34 ENSHCOG00000017767 #35 pan3 (ENSHCOG00000017741) #36 Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Ovalentaria ANCESTRAL SPECIES 21 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Pomacentridae ANCESTRAL SPECIES 11 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Amphiprion ANCESTRAL SPECIES 7 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Orange clownfish MODERN SPECIES 14 fam162a (ENSAPEG00000019169) mix23 (ENSAPEG00000019188) CSTA (ENSAPEG00000019211) cst14a.1 (ENSAPEG00000019223) ENSAPEG00000019238 drd3 (ENSAPEG00000019252) #12 qtrt2 (ENSAPEG00000019285) #13 ccdc191 (ENSAPEG00000019373) #14 zdhhc23b (ENSAPEG00000019399) #15 GRAMD1C (ENSAPEG00000019409) #16 ATP6V1A (ENSAPEG00000019428) #17 naa50 (ENSAPEG00000019465) #18 USF3 (ENSAPEG00000019483) #19 boc (ENSAPEG00000019504) #20 spice1 (ENSAPEG00000019524) #21 SHISA2 (ENSAPEG00000019549) #22 ATP8A2 (ENSAPEG00000019602) #23 rnf6 (ENSAPEG00000019812) #24 cdk8 (ENSAPEG00000019833) #25 wasf3b (ENSAPEG00000019876) #26 GPR12 (ENSAPEG00000019891) #27 usp12a (ENSAPEG00000019904) #28 rpl21 (ENSAPEG00000019936) #30 gtf3ab (ENSAPEG00000019970) lnx2a (ENSAPEG00000019988) #31 si:ch211-140b10.6 (ENSAPEG00000020039) #32 pdx1 (ENSAPEG00000020046) #33 urad (ENSAPEG00000020052) #34 ENSAPEG00000020068 #35 pan3 (ENSAPEG00000020111) #36 flt1 (ENSAPEG00000020139) #37 Clown anemonefish MODERN SPECIES 15 spice1 (ENSAOCG00000002419) #21 SHISA2 (ENSAOCG00000024289) #22 ATP8A2 (ENSAOCG00000024282) #23 rnf6 (ENSAOCG00000024242) #24 Spiny chromis MODERN SPECIES 213 ENSAPOG00000001973 drd3 (ENSAPOG00000001962) #12 qtrt2 (ENSAPOG00000001940) #13 ccdc191 (ENSAPOG00000001923) #14 zdhhc23b (ENSAPOG00000001884) #15 GRAMD1C (ENSAPOG00000001865) #16 ATP6V1A (ENSAPOG00000001859) #17 naa50 (ENSAPOG00000001840) #18 USF3 (ENSAPOG00000001822) #19 boc (ENSAPOG00000001799) #20 spice1 (ENSAPOG00000001760) #21 SHISA2 (ENSAPOG00000001748) #22 ATP8A2 (ENSAPOG00000024511) #23 rnf6 (ENSAPOG00000024448) #24 cdk8 (ENSAPOG00000024441) #25 wasf3b (ENSAPOG00000024422) #26 GPR12 (ENSAPOG00000024412) #27 usp12a (ENSAPOG00000024409) #28 rpl21 (ENSAPOG00000024402) #30 gtf3ab (ENSAPOG00000024391) lnx2a (ENSAPOG00000024314) #31 si:ch211-140b10.6 (ENSAPOG00000024281) #32 pdx1 (ENSAPOG00000024271) #33 urad (ENSAPOG00000024266) #34 ENSAPOG00000024259 #35 pan3 (ENSAPOG00000024239) #36 flt1 (ENSAPOG00000024197) #37 Bicolor damselfish MODERN SPECIES 1784 boc (ENSSPAG00000019043) #20 spice1 (ENSSPAG00000019082) #21 SHISA2 (ENSSPAG00000019106) #22 ATP8A2 (ENSSPAG00000019116) #23 rnf6 (ENSSPAG00000019173) #24 cdk8 (ENSSPAG00000019189) #25 Cichlidae ANCESTRAL SPECIES 18 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013.g #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00940000167204 ENSGT00940000177936 ENSGT00940000154826.m.a.a ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013.g #16 ENSGT00940000158013.h #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207.c.a #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT00940000155717 ENSGT00940000154826.m.b ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013.g #16 ENSGT00940000158013.h #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207.c.a #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Haplochromini ANCESTRAL SPECIES 21 ENSGT00940000155717.w.b ENSGT00940000154826.m.b ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013.g #16 ENSGT00940000158013.h #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207.c.a #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Burton s mouthbrooder MODERN SPECIES 270 CSTA (ENSHBUG00000016899) ENSHBUG00000016964 CSTA (ENSHBUG00000016985) CSTA (ENSHBUG00000016993) ENSHBUG00000016998 drd3 (ENSHBUG00000017022) #12 qtrt2 (ENSHBUG00000017045) #13 ccdc191 (ENSHBUG00000017071) #14 zdhhc23b (ENSHBUG00000000899) #15 GRAMD1C (ENSHBUG00000017114) #16 ATP6V1A (ENSHBUG00000017201) #17 naa50 (ENSHBUG00000017240) #18 USF3 (ENSHBUG00000017255) #19 boc (ENSHBUG00000017289) #20 spice1 (ENSHBUG00000017318) #21 SHISA2 (ENSHBUG00000017332) #22 ATP8A2 (ENSHBUG00000018016) #23 rnf6 (ENSHBUG00000018070) #24 cdk8 (ENSHBUG00000018142) #25 wasf3b (ENSHBUG00000018160) #26 GPR12 (ENSHBUG00000018176) #27 usp12a (ENSHBUG00000000986) #28 rpl21 (ENSHBUG00000000537) #30 gtf3ab (ENSHBUG00000018273) lnx2a (ENSHBUG00000018329) #31 si:ch211-140b10.6 (ENSHBUG00000018338) #32 pdx1 (ENSHBUG00000018351) #33 urad (ENSHBUG00000018343) #34 ENSHBUG00000018369 #35 pan3 (ENSHBUG00000018423) #36 flt1 (ENSHBUG00000018437) #37 Haplochromini_A ANCESTRAL SPECIES 21 ENSGT00940000155717.w.b ENSGT00940000154826.m.b ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013.g #16 ENSGT00940000158013.h #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207.c.a #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 P. nyererei MODERN SPECIES 302 CSTA (ENSPNYG00000004408) ENSPNYG00000004397 ENSPNYG00000004378 drd3 (ENSPNYG00000004353) #12 ENSPNYG00000004336 #13 qtrt2 (ENSPNYG00000004318) #13 ccdc191 (ENSPNYG00000004241) #14 zdhhc23b (ENSPNYG00000004192) #15 GRAMD1C (ENSPNYG00000004165) #16 ENSPNYG00000004142 #16 ATP6V1A (ENSPNYG00000004079) #17 naa50 (ENSPNYG00000004042) #18 USF3 (ENSPNYG00000003994) #19 boc (ENSPNYG00000003898) #20 spice1 (ENSPNYG00000003845) #21 SHISA2 (ENSPNYG00000003832) #22 ATP8A2 (ENSPNYG00000003743) #23 rnf6 (ENSPNYG00000003715) #24 cdk8 (ENSPNYG00000003660) #25 wasf3b (ENSPNYG00000003634) #26 GPR12 (ENSPNYG00000003617) #27 usp12a (ENSPNYG00000003584) #28 rpl21 (ENSPNYG00000003537) #30 gtf3ab (ENSPNYG00000003480) lnx2a (ENSPNYG00000003429) #31 si:ch211-140b10.6 (ENSPNYG00000003407) #32 pdx1 (ENSPNYG00000003394) #33 urad (ENSPNYG00000003397) #34 pan3 (ENSPNYG00000003342) #36 flt1 (ENSPNYG00000003141) #37 ENSPNYG00000003101 Haplochromini_B ANCESTRAL SPECIES 18 ENSGT00940000154826.m.a.a ENSGT00940000155717.w.b ENSGT00940000154826.m.b ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013.g #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207.c.a #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 Eastern happy MODERN SPECIES 21 ENSACLG00000026901 ENSACLG00000026896 ENSACLG00000026892 ENSACLG00000026889 drd3 (ENSACLG00000026861) #12 ENSACLG00000026858 qtrt2 (ENSACLG00000026851) #13 ccdc191 (ENSACLG00000026842) #14 zdhhc23b (ENSACLG00000026835) #15 GRAMD1C (ENSACLG00000026795) #16 ATP6V1A (ENSACLG00000026770) #17 naa50 (ENSACLG00000026747) #18 USF3 (ENSACLG00000026738) #19 boc (ENSACLG00000026731) #20 spice1 (ENSACLG00000026702) #21 SHISA2 (ENSACLG00000026696) #22 ATP8A2 (ENSACLG00000026526) #23 rnf6 (ENSACLG00000026519) #24 cdk8 (ENSACLG00000026495) #25 wasf3b (ENSACLG00000026485) #26 GPR12 (ENSACLG00000026478) #27 usp12a (ENSACLG00000026460) #28 rpl21 (ENSACLG00000026444) #30 gtf3ab (ENSACLG00000026436) lnx2a (ENSACLG00000026401) #31 si:ch211-140b10.6 (ENSACLG00000026398) #32 urad (ENSACLG00000026387) #34 pdx1 (ENSACLG00000026382) #33 ENSACLG00000026361 pan3 (ENSACLG00000026314) #36 ENSACLG00000026260 Zebra mbuna MODERN SPECIES CSTA (ENSMZEG00005021972) CSTA (ENSMZEG00005021970) ENSMZEG00005021961 ENSMZEG00005021960 ENSMZEG00005021958 drd3 (ENSMZEG00005021957) #12 qtrt2 (ENSMZEG00005021955) #13 ccdc191 (ENSMZEG00005021954) #14 zdhhc23b (ENSMZEG00005021952) #15 GRAMD1C (ENSMZEG00005021950) #16 ATP6V1A (ENSMZEG00005021948) #17 naa50 (ENSMZEG00005021947) #18 USF3 (ENSMZEG00005021946) #19 boc (ENSMZEG00005021944) #20 spice1 (ENSMZEG00005021942) #21 SHISA2 (ENSMZEG00005021941) #22 ATP8A2 (ENSMZEG00005021937) #23 rnf6 (ENSMZEG00005021933) #24 cdk8 (ENSMZEG00005021927) #25 wasf3b (ENSMZEG00005021919) #26 GPR12 (ENSMZEG00005021917) #27 usp12a (ENSMZEG00005021913) #28 rpl21 (ENSMZEG00005021908) #30 gtf3ab (ENSMZEG00005021906) lnx2a (ENSMZEG00005021902) #31 si:ch211-140b10.6 (ENSMZEG00005021900) #32 pdx1 (ENSMZEG00005021892) #33 urad (ENSMZEG00005021895) #34 pan3 (ENSMZEG00005021885) #36 flt1 (ENSMZEG00005021867) #37 ENSMZEG00005021860 Lyretail cichlid MODERN SPECIES 323 ENSNBRG00000022630 ENSNBRG00000022725 ENSNBRG00000022779 ENSNBRG00000022824 drd3 (ENSNBRG00000022837) #12 qtrt2 (ENSNBRG00000022845) #13 ccdc191 (ENSNBRG00000022869) #14 zdhhc23b (ENSNBRG00000022890) #15 ENSNBRG00000022909 #16 ENSNBRG00000022925 #16 ATP6V1A (ENSNBRG00000022943) #17 naa50 (ENSNBRG00000022959) #18 USF3 (ENSNBRG00000023005) #19 boc (ENSNBRG00000023027) #20 spice1 (ENSNBRG00000023047) #21 SHISA2 (ENSNBRG00000023056) #22 ATP8A2 (ENSNBRG00000023069) #23 rnf6 (ENSNBRG00000023098) #24 cdk8 (ENSNBRG00000023105) #25 wasf3b (ENSNBRG00000023115) #26 GPR12 (ENSNBRG00000023121) #27 usp12a (ENSNBRG00000023131) #28 rpl21 (ENSNBRG00000023147) #30 gtf3ab (ENSNBRG00000023177) lnx2a (ENSNBRG00000023213) #31 si:ch211-140b10.6 (ENSNBRG00000023228) #32 pdx1 (ENSNBRG00000023242) #33 urad (ENSNBRG00000023250) #34 pan3 (ENSNBRG00000023258) #36 flt1 (ENSNBRG00000023280) #37 ENSNBRG00000023322 Nile tilapia MODERN SPECIES 21 ENSONIG00000041403 ENSONIG00000038343 ENSONIG00000014067 drd3 (ENSONIG00000014071) #12 qtrt2 (ENSONIG00000014074) #13 ccdc191 (ENSONIG00000014075) #14 zdhhc23 (ENSONIG00000037801) #15 GRAMD1C (ENSONIG00000014079) #16 ENSONIG00000036856 #16 ATP6V1A (ENSONIG00000014082) #17 naa50 (ENSONIG00000014087) #18 USF3 (ENSONIG00000014090) #19 boc (ENSONIG00000014095) #20 ENSONIG00000039233 spice1 (ENSONIG00000014101) #21 SHISA2 (ENSONIG00000014104) #22 ATP8A2 (ENSONIG00000014106) #23 rnf6 (ENSONIG00000014121) #24 cdk8 (ENSONIG00000014123) #25 wasf3b (ENSONIG00000014127) #26 GPR12 (ENSONIG00000020418) #27 usp12a (ENSONIG00000014128) #28 rpl21 (ENSONIG00000014130) #30 gtf3ab (ENSONIG00000014134) lnx2a (ENSONIG00000014132) #31 si:ch211-140b10.6 (ENSONIG00000040238) #32 pdx1 (ENSONIG00000014137) #33 urad (ENSONIG00000014138) #34 ENSONIG00000034807 ENSONIG00000036369 ENSONIG00000028459 #35 Midas cichlid MODERN SPECIES 363 fam162a (ENSACIG00000021239) mix23 (ENSACIG00000021272) CSTA (ENSACIG00000021286) cst14b.1 (ENSACIG00000021383) ENSACIG00000021429 drd3 (ENSACIG00000021441) #12 qtrt2 (ENSACIG00000021458) #13 ccdc191 (ENSACIG00000021519) #14 zdhhc23b (ENSACIG00000021539) #15 GRAMD1C (ENSACIG00000021565) #16 ATP6V1A (ENSACIG00000021592) #17 naa50 (ENSACIG00000021620) #18 USF3 (ENSACIG00000021632) #19 boc (ENSACIG00000021641) #20 spice1 (ENSACIG00000021669) #21 SHISA2 (ENSACIG00000021688) #22 ATP8A2 (ENSACIG00000021702) #23 rnf6 (ENSACIG00000021751) #24 cdk8 (ENSACIG00000021765) #25 wasf3b (ENSACIG00000021790) #26 GPR12 (ENSACIG00000021857) #27 usp12a (ENSACIG00000021864) #28 rpl21 (ENSACIG00000021885) #30 gtf3ab (ENSACIG00000021913) lnx2a (ENSACIG00000021939) #31 si:ch211-140b10.6 (ENSACIG00000021953) #32 pdx1 (ENSACIG00000021962) #33 urad (ENSACIG00000021969) #34 ENSACIG00000021981 #35 pan3 (ENSACIG00000021996) #36 flt1 (ENSACIG00000022019) #37 Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00940000155717 ENSGT00940000167204 ENSGT00940000177936 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00940000154826 ENSGT00940000155717 ENSGT00940000167204 ENSGT00990000205642 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Aplocheiloidei ANCESTRAL SPECIES 18 ENSGT00940000154826 ENSGT00940000155717 ENSGT00940000167204 ENSGT01010000227412 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Turquoise killifish MODERN SPECIES 1617 fam162a (ENSNFUG00015021853) mix23 (ENSNFUG00015021856) CSTA (ENSNFUG00015021862) Nfu_g_1_011208 (ENSNFUG00015021863) ENSNFUG00015021865 OLA.2341 (ENSNFUG00015021870) DRD3 (ENSNFUG00015021875) #12 QTRTD1 (ENSNFUG00015021880) #13 ccdc191 (ENSNFUG00015021885) #14 zdhhc23b (ENSNFUG00015021889) #15 GRAMD1C (ENSNFUG00015021891) #16 ATP6V1A (ENSNFUG00015021906) #17 naa50 (ENSNFUG00015021945) #18 USF3 (ENSNFUG00015021968) #19 SPICE1 (ENSNFUG00015021978) #21 SHISA2 (ENSNFUG00015021991) #22 ATP8A2 (ENSNFUG00015022113) #23 rnf6 (ENSNFUG00015023929) #24 cdk8 (ENSNFUG00015023965) #25 WASF3 (ENSNFUG00015024083) #26 GPR12 (ENSNFUG00015024085) #27 USP12A (ENSNFUG00015024086) #28 RPL21 (ENSNFUG00015024091) #30 gtf3ab (ENSNFUG00015024101) LNX2A (ENSNFUG00015024113) #31 si:ch211-140b10.6 (ENSNFUG00015024120) #32 pdx1 (ENSNFUG00015024122) #33 urad (ENSNFUG00015024126) #34 pan3 (ENSNFUG00015006219) #36 ENSNFUG00015006655 ENSNFUG00015006799 Mangrove rivulus MODERN SPECIES 7 CSTA (ENSKMAG00000009919) ENSKMAG00000009905 ENSKMAG00000009889 ENSKMAG00000009876 ENSKMAG00000009862 ENSKMAG00000009849 drd3 (ENSKMAG00000009813) #12 qtrt2 (ENSKMAG00000009788) #13 zdhhc23b (ENSKMAG00000009771) #15 GRAMD1C (ENSKMAG00000009752) #16 ATP6V1A (ENSKMAG00000009689) #17 naa50 (ENSKMAG00000009660) #18 USF3 (ENSKMAG00000009621) #19 boc (ENSKMAG00000009548) #20 spice1 (ENSKMAG00000009498) #21 SHISA2 (ENSKMAG00000009487) #22 ATP8A2 (ENSKMAG00000009265) #23 rnf6 (ENSKMAG00000009214) #24 cdk8 (ENSKMAG00000009153) #25 wasf3b (ENSKMAG00000009131) #26 GPR12 (ENSKMAG00000009119) #27 usp12a (ENSKMAG00000009072) #28 rpl21 (ENSKMAG00000009040) #30 gtf3ab (ENSKMAG00000009030) lnx2a (ENSKMAG00000008967) #31 si:ch211-140b10.6 (ENSKMAG00000008930) #32 pdx1 (ENSKMAG00000008908) #33 urad (ENSKMAG00000008917) #34 ENSKMAG00000008881 #35 pan3 (ENSKMAG00000008813) #36 flt1 (ENSKMAG00000008730) #37 Cyprinodontoidei ANCESTRAL SPECIES 25 ENSGT00940000155894 ENSGT00940000159307 ENSGT00940000154826.q ENSGT00990000205642 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Poeciliinae ANCESTRAL SPECIES 20 ENSGT00940000155894 ENSGT00940000159307 ENSGT00940000154826.q ENSGT00940000154826.r ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104.h #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Poecilia ANCESTRAL SPECIES 17 ENSGT00940000155894 ENSGT00940000159307 ENSGT00940000154826.q ENSGT00940000154826.r ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104.h #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 NAME_6 ANCESTRAL SPECIES 22 ENSGT00940000155894 ENSGT00940000159307 ENSGT00940000154826.q ENSGT00940000154826.r ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104.h #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Sailfin molly MODERN SPECIES 106 PREX2 (ENSPLAG00000023873) CPA6 (ENSPLAG00000023880) ENSPLAG00000023888 ENSPLAG00000002443 ENSPLAG00000002447 drd3 (ENSPLAG00000002480) #12 qtrt2 (ENSPLAG00000002496) #13 ccdc191 (ENSPLAG00000002511) #14 zdhhc23b (ENSPLAG00000002524) #15 GRAMD1C (ENSPLAG00000002542) #16 ATP6V1A (ENSPLAG00000002573) #17 naa50 (ENSPLAG00000002589) #18 USF3 (ENSPLAG00000002597) #19 boc (ENSPLAG00000002605) #20 spice1 (ENSPLAG00000002614) #21 SHISA2 (ENSPLAG00000002624) #22 ATP8A2 (ENSPLAG00000002681) #23 rnf6 (ENSPLAG00000002697) #24 cdk8 (ENSPLAG00000002706) #25 Amazon molly MODERN SPECIES 315 PREX2 (ENSPFOG00000010245) CPA6 (ENSPFOG00000010099) ENSPFOG00000010082 ENSPFOG00000010060 ENSPFOG00000010056 drd3 (ENSPFOG00000010006) #12 qtrt2 (ENSPFOG00000009940) #13 ccdc191 (ENSPFOG00000009862) #14 zdhhc23b (ENSPFOG00000009855) #15 GRAMD1C (ENSPFOG00000009784) #16 ATP6V1A (ENSPFOG00000009444) #17 naa50 (ENSPFOG00000009397) #18 USF3 (ENSPFOG00000009350) #19 boc (ENSPFOG00000009136) #20 spice1 (ENSPFOG00000009036) #21 SHISA2 (ENSPFOG00000009024) #22 ATP8A2 (ENSPFOG00000008201) #23 rnf6 (ENSPFOG00000008161) #24 cdk8 (ENSPFOG00000008071) #25 wasf3b (ENSPFOG00000008013) #26 GPR12 (ENSPFOG00000020724) #27 usp12a (ENSPFOG00000007941) #28 rpl21 (ENSPFOG00000007900) #30 gtf3ab (ENSPFOG00000007819) lnx2a (ENSPFOG00000007692) #31 si:ch211-140b10.6 (ENSPFOG00000007686) #32 pdx1 (ENSPFOG00000007668) #33 urad (ENSPFOG00000007646) #34 ENSPFOG00000023223 #35 pan3 (ENSPFOG00000007327) #36 flt1 (ENSPFOG00000006735) #37 Guppy MODERN SPECIES 451 PREX2 (ENSPREG00000018499) CPA6 (ENSPREG00000018594) ENSPREG00000018616 ENSPREG00000018646 ENSPREG00000018734 drd3 (ENSPREG00000018785) #12 qtrt2 (ENSPREG00000018812) #13 ccdc191 (ENSPREG00000018841) #14 zdhhc23b (ENSPREG00000018884) #15 GRAMD1C (ENSPREG00000018899) #16 ATP6V1A (ENSPREG00000018929) #17 naa50 (ENSPREG00000018952) #18 USF3 (ENSPREG00000018977) #19 boc (ENSPREG00000019002) #20 spice1 (ENSPREG00000019030) #21 SHISA2 (ENSPREG00000019052) #22 ATP8A2 (ENSPREG00000019110) #23 rnf6 (ENSPREG00000019333) #24 cdk8 (ENSPREG00000019351) #25 wasf3b (ENSPREG00000019391) #26 GPR12 (ENSPREG00000019422) #27 usp12a (ENSPREG00000019433) #28 rpl21 (ENSPREG00000019457) #30 gtf3ab (ENSPREG00000019485) lnx2a (ENSPREG00000019499) #31 si:ch211-140b10.6 (ENSPREG00000019527) #32 pdx1 (ENSPREG00000019531) #33 urad (ENSPREG00000019535) #34 ENSPREG00000019544 #35 pan3 (ENSPREG00000019582) #36 flt1 (ENSPREG00000019634) #37 Platyfish MODERN SPECIES 13 PREX2 (ENSXMAG00000010123) CPA6 (ENSXMAG00000010115) ENSXMAG00000010111 ENSXMAG00000010110 ENSXMAG00000010109 drd3 (ENSXMAG00000010098) #12 qtrt2 (ENSXMAG00000010094) #13 ccdc191 (ENSXMAG00000010089) #14 zdhhc23b (ENSXMAG00000010085) #15 GRAMD1C (ENSXMAG00000010068) #16 ATP6V1A (ENSXMAG00000010055) #17 naa50 (ENSXMAG00000010052) #18 USF3 (ENSXMAG00000010050) #19 boc (ENSXMAG00000010032) #20 spice1 (ENSXMAG00000010030) #21 SHISA2 (ENSXMAG00000010029) #22 ATP8A2 (ENSXMAG00000009957) #23 rnf6 (ENSXMAG00000026532) #24 cdk8 (ENSXMAG00000009914) #25 wasf3b (ENSXMAG00000009903) #26 GPR12 (ENSXMAG00000020160) #27 usp12a (ENSXMAG00000009886) #28 rpl21 (ENSXMAG00000024769) #30 gtf3ab (ENSXMAG00000029776) lnx2a (ENSXMAG00000009830) #31 si:ch211-140b10.6 (ENSXMAG00000012886) #32 pdx1 (ENSXMAG00000019562) #33 urad (ENSXMAG00000012887) #34 ENSXMAG00000026989 #35 pan3 (ENSXMAG00000009821) #36 flt1 (ENSXMAG00000009774) #37 NAME_4 ANCESTRAL SPECIES 31 ENSGT00940000155894 ENSGT00940000159307 ENSGT00940000154826.q ENSGT00990000205642 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Mummichog MODERN SPECIES 981 PREX2 (ENSFHEG00000017606) CPA6 (ENSFHEG00000000441) cst14a.2 (ENSFHEG00000017496) ENSFHEG00000017482 ENSFHEG00000017474 ENSFHEG00000017464 #12 qtrt2 (ENSFHEG00000017445) #13 ccdc191 (ENSFHEG00000017428) #14 zdhhc23b (ENSFHEG00000017412) #15 GRAMD1C (ENSFHEG00000017396) #16 atp6v1a (ENSFHEG00000017369) #17 naa50 (ENSFHEG00000017077) #18 USF3 (ENSFHEG00000017044) #19 boc (ENSFHEG00000017028) #20 spice1 (ENSFHEG00000016952) #21 SHISA2 (ENSFHEG00000016943) #22 ATP8A2 (ENSFHEG00000016932) #23 rnf6 (ENSFHEG00000016710) #24 cdk8 (ENSFHEG00000016706) #25 wasf3b (ENSFHEG00000016672) #26 GPR12 (ENSFHEG00000016645) #27 rpl21 (ENSFHEG00000016636) #30 gtf3ab (ENSFHEG00000016618) lnx2a (ENSFHEG00000000744) #31 si:ch211-140b10.6 (ENSFHEG00000016563) #32 pdx1 (ENSFHEG00000016561) #33 urad (ENSFHEG00000016554) #34 ENSFHEG00000016549 #35 pan3 (ENSFHEG00000016539) #36 flt1 (ENSFHEG00000016507) #37 ENSFHEG00000016495 Sheepshead minnow MODERN SPECIES 846 ENSCVAG00000005621 drd3 (ENSCVAG00000005605) #12 qtrt2 (ENSCVAG00000005581) #13 ccdc191 (ENSCVAG00000005566) #14 zdhhc23b (ENSCVAG00000005540) #15 GRAMD1C (ENSCVAG00000005523) #16 ATP6V1A (ENSCVAG00000005516) #17 naa50 (ENSCVAG00000005453) #18 USF3 (ENSCVAG00000005450) #19 boc (ENSCVAG00000005427) #20 spice1 (ENSCVAG00000005383) #21 SHISA2 (ENSCVAG00000005375) #22 Oryzias ANCESTRAL SPECIES 18 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Oryzias_b ANCESTRAL SPECIES 16 ENSGT00390000011053 ENSGT00940000154826 ENSGT00940000167204.b ENSGT00940000167204.a ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Javanese ricefish MODERN SPECIES 12 ENSOJAG00000016565 ENSOJAG00000016648 ENSOJAG00000016689 ENSOJAG00000016702 ENSOJAG00000016715 drd3 (ENSOJAG00000016733) #12 qtrt2 (ENSOJAG00000016743) #13 ccdc191 (ENSOJAG00000016753) #14 zdhhc23b (ENSOJAG00000016768) #15 GRAMD1C (ENSOJAG00000016778) #16 ATP6V1A (ENSOJAG00000016811) #17 naa50 (ENSOJAG00000016859) #18 USF3 (ENSOJAG00000016990) #19 boc (ENSOJAG00000017091) #20 spice1 (ENSOJAG00000017100) #21 SHISA2 (ENSOJAG00000017116) #22 ATP8A2 (ENSOJAG00000017288) #23 rnf6 (ENSOJAG00000019897) #24 cdk8 (ENSOJAG00000019911) #25 wasf3b (ENSOJAG00000019989) #26 GPR12 (ENSOJAG00000019997) #27 usp12a (ENSOJAG00000020020) #28 rpl21 (ENSOJAG00000020175) #30 gtf3ab (ENSOJAG00000020199) lnx2a (ENSOJAG00000020216) #31 si:ch211-140b10.6 (ENSOJAG00000020245) #32 pdx1 (ENSOJAG00000020248) #33 urad (ENSOJAG00000020253) #34 ENSOJAG00000020262 #35 pan3 (ENSOJAG00000020316) #36 flt1 (ENSOJAG00000020693) #37 Indian medaka MODERN SPECIES 14 cst14a.1 (ENSOMEG00000006588) ENSOMEG00000006597 ENSOMEG00000006603 ENSOMEG00000006640 drd3 (ENSOMEG00000006687) #12 qtrt2 (ENSOMEG00000006725) #13 ccdc191 (ENSOMEG00000006747) #14 zdhhc23b (ENSOMEG00000006774) #15 ENSOMEG00000006800 GRAMD1C (ENSOMEG00000006824) #16 ATP6V1A (ENSOMEG00000006849) #17 naa50 (ENSOMEG00000006892) #18 USF3 (ENSOMEG00000006956) #19 boc (ENSOMEG00000007008) #20 spice1 (ENSOMEG00000007043) #21 SHISA2 (ENSOMEG00000007061) #22 ATP8A2 (ENSOMEG00000007276) #23 rnf6 (ENSOMEG00000007346) #24 cdk8 (ENSOMEG00000007387) #25 wasf3b (ENSOMEG00000007420) #26 GPR12 (ENSOMEG00000007430) #27 usp12a (ENSOMEG00000007466) #28 rpl21 (ENSOMEG00000007496) #30 gtf3ab (ENSOMEG00000007523) lnx2a (ENSOMEG00000007585) #31 si:ch211-140b10.6 (ENSOMEG00000000839) #32 urad (ENSOMEG00000007646) #34 pdx1 (ENSOMEG00000007658) #33 ENSOMEG00000007697 #35 pan3 (ENSOMEG00000007798) #36 flt1 (ENSOMEG00000007898) #37 Oryzias_a ANCESTRAL SPECIES 16 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000154826.o ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 ENSGT00940000160085 Chinese medaka MODERN SPECIES 1041 KPNA1 (ENSOSIG00000016366) fam162a (ENSOSIG00000016580) mix23 (ENSOSIG00000016582) ENSOSIG00000016584 ENSOSIG00000016586 drd3 (ENSOSIG00000016587) #12 qtrt2 (ENSOSIG00000016589) #13 ccdc191 (ENSOSIG00000016590) #14 zdhhc23b (ENSOSIG00000016593) #15 ENSOSIG00000016596 #16 ATP6V1A (ENSOSIG00000016602) #17 naa50 (ENSOSIG00000016686) #18 USF3 (ENSOSIG00000016697) #19 boc (ENSOSIG00000016703) #20 spice1 (ENSOSIG00000016706) #21 SHISA2 (ENSOSIG00000016711) #22 ATP8A2 (ENSOSIG00000016918) #23 rnf6 (ENSOSIG00000021376) #24 cdk8 (ENSOSIG00000021415) #25 wasf3b (ENSOSIG00000021582) #26 GPR12 (ENSOSIG00000021583) #27 usp12a (ENSOSIG00000021601) #28 rpl21 (ENSOSIG00000021604) #30 gtf3ab (ENSOSIG00000021608) lnx2a (ENSOSIG00000021609) #31 si:ch211-140b10.6 (ENSOSIG00000021611) #32 pan3 (ENSOSIG00000021629) #36 flt1 (ENSOSIG00000021671) #37 ENSOSIG00000021682 TMPRSS7 (ENSOSIG00000021686) ENSOSIG00000021692 Japanese Medaka HdrR MODERN SPECIES 12 cst14a.1 (ENSORLG00000026441) ENSORLG00000022570 ENSORLG00000009234 drd3 (ENSORLG00000009228) #12 ENSORLG00000022216 qtrt2 (ENSORLG00000009211) #13 ccdc191 (ENSORLG00000009175) #14 zdhhc23b (ENSORLG00000009146) #15 GRAMD1C (ENSORLG00000009136) #16 ENSORLG00000020467 #16 ATP6V1A (ENSORLG00000009123) #17 naa50 (ENSORLG00000009116) #18 USF3 (ENSORLG00000009097) #19 boc (ENSORLG00000009087) #20 spice1 (ENSORLG00000009080) #21 SHISA2 (ENSORLG00000009065) #22 ATP8A2 (ENSORLG00000009034) #23 rnf6 (ENSORLG00000008902) #24 cdk8 (ENSORLG00000008885) #25 wasf3b (ENSORLG00000008849) #26 GPR12 (ENSORLG00000008826) #27 usp12a (ENSORLG00000008821) #28 rpl21 (ENSORLG00000008802) #30 gtf3ab (ENSORLG00000008788) lnx2a (ENSORLG00000008783) #31 si:ch211-140b10.6 (ENSORLG00000008770) #32 urad (ENSORLG00000008761) #34 pdx1 (ENSORLG00000027056) #33 ENSORLG00000024815 ENSORLG00000022644 #35 pan3 (ENSORLG00000008758) #36 Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Anabantaria ANCESTRAL SPECIES 22 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Zig-zag eel MODERN SPECIES 12 SEC22C (ENSMAMG00000001771) vipr1b (ENSMAMG00000001724) ENSMAMG00000001694 ENSMAMG00000001682 ENSMAMG00000001671 drd3 (ENSMAMG00000001639) #12 qtrt2 (ENSMAMG00000001620) #13 ccdc191 (ENSMAMG00000001576) #14 zdhhc23b (ENSMAMG00000001565) #15 GRAMD1C (ENSMAMG00000001522) #16 ATP6V1A (ENSMAMG00000001472) #17 naa50 (ENSMAMG00000001446) #18 USF3 (ENSMAMG00000001426) #19 boc (ENSMAMG00000001403) #20 spice1 (ENSMAMG00000001367) #21 ENSMAMG00000001341 #22 ENSMAMG00000001238 #23 rnf6 (ENSMAMG00000001204) #24 cdk8 (ENSMAMG00000001143) #25 wasf3b (ENSMAMG00000001084) #26 GPR12 (ENSMAMG00000001074) #27 usp12a (ENSMAMG00000001039) #28 rpl21 (ENSMAMG00000001006) #30 lnx2a (ENSMAMG00000000961) #31 si:ch211-140b10.6 (ENSMAMG00000025733) #32 pdx1 (ENSMAMG00000000879) #33 urad (ENSMAMG00000000909) #34 ENSMAMG00000000808 #35 pan3 (ENSMAMG00000000722) #36 flt1 (ENSMAMG00000000600) #37 ENSMAMG00000000572 Anabantoidei ANCESTRAL SPECIES 20 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Climbing perch MODERN SPECIES 11 FAM162A (ENSATEG00000026117) mix23 (ENSATEG00000009463) CSTA (ENSATEG00000026934) ENSATEG00000009635 ENSATEG00000009650 drd3 (ENSATEG00000009656) #12 qtrt2 (ENSATEG00000009688) #13 ccdc191 (ENSATEG00000009736) #14 zdhhc23b (ENSATEG00000009750) #15 GRAMD1C (ENSATEG00000009766) #16 ATP6V1A (ENSATEG00000009782) #17 naa50 (ENSATEG00000028968) #18 USF3 (ENSATEG00000010036) #19 boc (ENSATEG00000010074) #20 spice1 (ENSATEG00000010118) #21 ENSATEG00000029016 #22 ENSATEG00000010180 #23 ENSATEG00000010391 rnf6 (ENSATEG00000026758) #24 ENSATEG00000028138 cdk8 (ENSATEG00000010432) #25 wasf3b (ENSATEG00000010470) #26 GPR12 (ENSATEG00000010476) #27 usp12a (ENSATEG00000010491) #28 rpl21 (ENSATEG00000028448) #30 gtf3ab (ENSATEG00000010552) lnx2a (ENSATEG00000010632) #31 si:ch211-140b10.6 (ENSATEG00000028994) #32 pdx1 (ENSATEG00000010719) #33 urad (ENSATEG00000027814) #34 ENSATEG00000010746 #35 Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000001635 ENSBSLG00000001630 ENSBSLG00000001626 ENSBSLG00000001613 ENSBSLG00000001606 ENSBSLG00000001589 drd3 (ENSBSLG00000001563) #12 qtrt2 (ENSBSLG00000001552) #13 ccdc191 (ENSBSLG00000001542) #14 zdhhc23b (ENSBSLG00000001533) #15 GRAMD1C (ENSBSLG00000001527) #16 naa50 (ENSBSLG00000001514) #18 USF3 (ENSBSLG00000001510) #19 boc (ENSBSLG00000001496) #20 spice1 (ENSBSLG00000001491) #21 SHISA2 (ENSBSLG00000001487) #22 ATP8A2 (ENSBSLG00000001396) #23 rnf6 (ENSBSLG00000001348) #24 cdk8 (ENSBSLG00000001285) #25 wasf3b (ENSBSLG00000000954) #26 GPR12 (ENSBSLG00000000953) #27 usp12a (ENSBSLG00000000944) #28 rpl21 (ENSBSLG00000000936) #30 gtf3ab (ENSBSLG00000000930) lnx2a (ENSBSLG00000000925) #31 si:ch211-140b10.6 (ENSBSLG00000000923) #32 pdx1 (ENSBSLG00000000920) #33 urad (ENSBSLG00000000918) #34 ENSBSLG00000000911 #35 pan3 (ENSBSLG00000000827) #36 flt1 (ENSBSLG00000000721) #37 Carangaria ANCESTRAL SPECIES 21 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Carangaria_A ANCESTRAL SPECIES 15 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Seriola ANCESTRAL SPECIES 36 ENSGT00940000155717.fb ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Greater amberjack MODERN SPECIES 33 ENSSDUG00000015569 ENSSDUG00000015533 ENSSDUG00000015517 cst14a.1 (ENSSDUG00000015492) ENSSDUG00000015479 drd3 (ENSSDUG00000015458) #12 qtrt2 (ENSSDUG00000015365) #13 ccdc191 (ENSSDUG00000015334) #14 zdhhc23b (ENSSDUG00000015323) #15 GRAMD1C (ENSSDUG00000015290) #16 ATP6V1A (ENSSDUG00000015244) #17 naa50 (ENSSDUG00000015223) #18 USF3 (ENSSDUG00000015215) #19 boc (ENSSDUG00000015193) #20 spice1 (ENSSDUG00000015166) #21 SHISA2 (ENSSDUG00000015155) #22 ATP8A2 (ENSSDUG00000015091) #23 rnf6 (ENSSDUG00000015066) #24 cdk8 (ENSSDUG00000015017) #25 wasf3b (ENSSDUG00000014968) #26 GPR12 (ENSSDUG00000014949) #27 usp12a (ENSSDUG00000014921) #28 rpl21 (ENSSDUG00000014894) #30 gtf3ab (ENSSDUG00000014874) lnx2a (ENSSDUG00000014849) #31 si:ch211-140b10.6 (ENSSDUG00000014841) #32 pdx1 (ENSSDUG00000014822) #33 urad (ENSSDUG00000014815) #34 ENSSDUG00000014776 #35 pan3 (ENSSDUG00000014721) #36 flt1 (ENSSDUG00000014557) #37 Yellowtail amberjack MODERN SPECIES 2962 ENSSLDG00000002909 ENSSLDG00000002986 ENSSLDG00000003017 ENSSLDG00000003226 ENSSLDG00000003496 drd3 (ENSSLDG00000003527) #12 qtrt2 (ENSSLDG00000003543) #13 ccdc191 (ENSSLDG00000003578) #14 zdhhc23b (ENSSLDG00000003636) #15 GRAMD1C (ENSSLDG00000003657) #16 ATP6V1A (ENSSLDG00000003688) #17 naa50 (ENSSLDG00000003753) #18 USF3 (ENSSLDG00000003795) #19 boc (ENSSLDG00000003818) #20 spice1 (ENSSLDG00000003858) #21 SHISA2 (ENSSLDG00000003874) #22 ATP8A2 (ENSSLDG00000003891) #23 rnf6 (ENSSLDG00000004031) #24 cdk8 (ENSSLDG00000004062) #25 wasf3b (ENSSLDG00000004150) #26 GPR12 (ENSSLDG00000004197) #27 usp12a (ENSSLDG00000004212) #28 rpl21 (ENSSLDG00000004270) #30 gtf3ab (ENSSLDG00000004329) lnx2a (ENSSLDG00000004432) #31 si:ch211-140b10.6 (ENSSLDG00000004483) #32 pdx1 (ENSSLDG00000004503) #33 urad (ENSSLDG00000004527) #34 pan3 (ENSSLDG00000004560) #36 flt1 (ENSSLDG00000004662) #37 ENSSLDG00000004888 Barramundi perch MODERN SPECIES 47 qtrt2 (ENSLCAG00010012022) #13 ccdc191 (ENSLCAG00010012030) #14 zdhhc23b (ENSLCAG00010012042) #15 GRAMD1C (ENSLCAG00010012044) #16 ENSLCAG00010012049 #16 ATP6V1A (ENSLCAG00010012065) #17 naa50 (ENSLCAG00010012108) #18 ENSLCAG00010012112 #19 boc (ENSLCAG00010012119) #20 spice1 (ENSLCAG00010012129) #21 ENSLCAG00010012145 ENSLCAG00010012166 ENSLCAG00010012169 ENSLCAG00010012178 ENSLCAG00010012184 SHISA2 (ENSLCAG00010012189) #22 ATP8A2 (ENSLCAG00010012233) #23 rnf6 (ENSLCAG00010012541) #24 cdk8 (ENSLCAG00010012572) #25 wasf3b (ENSLCAG00010012627) #26 GPR12 (ENSLCAG00010012632) #27 usp12a (ENSLCAG00010012644) #28 rpl21 (ENSLCAG00010012661) #30 gtf3ab (ENSLCAG00010012668) lnx2a (ENSLCAG00010012670) #31 si:ch211-140b10.6 (ENSLCAG00010012678) #32 pdx1 (ENSLCAG00010012680) #33 urad (ENSLCAG00010012682) #34 ENSLCAG00010012686 #35 pan3 (ENSLCAG00010012702) #36 flt1 (ENSLCAG00010012748) #37 Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000154826 ENSGT00940000167204 ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 Turbot MODERN SPECIES 13 ENSSMAG00000013880 ENSSMAG00000013915 ENSSMAG00000013918 ENSSMAG00000013952 ENSSMAG00000022461 ENSSMAG00000033833 drd3 (ENSSMAG00000013993) #12 qtrt2 (ENSSMAG00000014011) #13 ccdc191 (ENSSMAG00000014055) #14 zdhhc23b (ENSSMAG00000014084) #15 GRAMD1C (ENSSMAG00000014110) #16 ATP6V1A (ENSSMAG00000014144) #17 naa50 (ENSSMAG00000014183) #18 boc (ENSSMAG00000014203) #20 spice1 (ENSSMAG00000014217) #21 ENSSMAG00000014239 #22 ENSSMAG00000014252 #23 rnf6 (ENSSMAG00000034678) #24 cdk8 (ENSSMAG00000014316) #25 wasf3b (ENSSMAG00000014332) #26 GPR12 (ENSSMAG00000014361) #27 usp12a (ENSSMAG00000014366) #28 rpl21 (ENSSMAG00000014422) #30 lnx2a (ENSSMAG00000014440) #31 ENSSMAG00000025935 pdx1 (ENSSMAG00000024878) #33 urad (ENSSMAG00000026893) #34 pan3 (ENSSMAG00000014517) #36 flt1 (ENSSMAG00000014621) #37 ENSSMAG00000033055 ENSSMAG00000014705 Tongue sole MODERN SPECIES 13 GRAMD1C (ENSCSEG00000017113) #16 zdhhc23b (ENSCSEG00000017103) #15 ccdc191 (ENSCSEG00000017076) #14 qtrt2 (ENSCSEG00000017068) #13 drd3 (ENSCSEG00000017041) #12 ENSCSEG00000016932 ENSCSEG00000016922 mix23 (ENSCSEG00000016861) fam162a (ENSCSEG00000016848) KPNA1 (ENSCSEG00000016839) ATP6V1A (ENSCSEG00000016806) #17 naa50 (ENSCSEG00000016768) #18 USF3 (ENSCSEG00000016756) #19 boc (ENSCSEG00000016741) #20 spice1 (ENSCSEG00000016689) #21 SHISA2 (ENSCSEG00000016679) #22 ENSCSEG00000016676 ATP8A2 (ENSCSEG00000016616) #23 rnf6 (ENSCSEG00000016589) #24 cdk8 (ENSCSEG00000016558) #25 wasf3b (ENSCSEG00000016546) #26 GPR12 (ENSCSEG00000016542) #27 usp12a (ENSCSEG00000016531) #28 rpl21 (ENSCSEG00000016515) #30 gtf3ab (ENSCSEG00000016508) lnx2a (ENSCSEG00000016493) #31 si:ch211-140b10.6 (ENSCSEG00000016484) #32 urad (ENSCSEG00000016481) #34 pdx1 (ENSCSEG00000016475) #33 urad (ENSCSEG00000016472) #34 urad (ENSCSEG00000016469) #34 Eupercaria ANCESTRAL SPECIES 20 ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Tetraodontidae ANCESTRAL SPECIES 18 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000167204 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Fugu MODERN SPECIES 1 fam162a (ENSTRUG00000017646) mix23 (ENSTRUG00000017648) ENSTRUG00000017654 ENSTRUG00000017651 ENSTRUG00000021453 drd3 (ENSTRUG00000000584) #12 qtrt2 (ENSTRUG00000000756) #13 ccdc191 (ENSTRUG00000000805) #14 zdhhc23b (ENSTRUG00000000900) #15 GRAMD1C (ENSTRUG00000000928) #16 ATP6V1A (ENSTRUG00000001022) #17 naa50 (ENSTRUG00000021721) #18 USF3 (ENSTRUG00000023199) #19 boc (ENSTRUG00000001346) #20 spice1 (ENSTRUG00000001581) #21 shisa2 (ENSTRUG00000028233) #22 ATP8A2 (ENSTRUG00000001682) #23 rnf6 (ENSTRUG00000021431) #24 cdk8 (ENSTRUG00000003969) #25 wasf3b (ENSTRUG00000004356) #26 GPR12 (ENSTRUG00000004806) #27 usp12a (ENSTRUG00000004837) #28 rpl21 (ENSTRUG00000005068) #30 gtf3ab (ENSTRUG00000005241) lnx2a (ENSTRUG00000005500) #31 si:ch211-140b10.6 (ENSTRUG00000031975) #32 pdx1 (ENSTRUG00000005693) #33 urad (ENSTRUG00000005741) #34 ENSTRUG00000022468 #35 pan3 (ENSTRUG00000005777) #36 flt1 (ENSTRUG00000006184) #37 Tetraodon MODERN SPECIES 26 ENSTNIG00000004473 ENSTNIG00000004472 ENSTNIG00000004465 frem2b (ENSTNIG00000004462) PRDM6 (ENSTNIG00000004450) CEP120 (ENSTNIG00000004449) ZNF608 (ENSTNIG00000004448) ENSTNIG00000004444 ENSTNIG00000012931 ENSTNIG00000004426 ENSTNIG00000004425 gria2b (ENSTNIG00000004419) ENSTNIG00000004416 ENSTNIG00000004413 EIF4A1 (ENSTNIG00000004408) SHISA2 (ENSTNIG00000000624) #22 ENSTNIG00000004407 #23 ENSTNIG00000004406 myh11a (ENSTNIG00000004405) ENSTNIG00000001197 ENSTNIG00000004404 ENSTNIG00000004402 cdc42ep3 (ENSTNIG00000004401) ENSTNIG00000002393 ENSTNIG00000004399 ugt8 (ENSTNIG00000004397) spock3 (ENSTNIG00000004396) ndufa2 (ENSTNIG00000004393) ik (ENSTNIG00000004392) ENSTNIG00000004391 fbxo2 (ENSTNIG00000004388) Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661.m.a #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Ballan wrasse MODERN SPECIES 8 NANOS2 (ENSLBEG00000018836) KPNA1 (ENSLBEG00000018793) fam162a (ENSLBEG00000018775) mix23 (ENSLBEG00000018746) ENSLBEG00000018723 ENSLBEG00000018704 drd3 (ENSLBEG00000018697) #12 qtrt2 (ENSLBEG00000018687) #13 zdhhc23b (ENSLBEG00000018660) #15 ccdc191 (ENSLBEG00000018616) #14 GRAMD1C (ENSLBEG00000018585) #16 ATP6V1A (ENSLBEG00000018520) #17 naa50 (ENSLBEG00000018474) #18 USF3 (ENSLBEG00000018434) #19 boc (ENSLBEG00000018362) #20 SHISA2 (ENSLBEG00000018324) #22 ENSLBEG00000018301 ATP8A2 (ENSLBEG00000018024) #23 rnf6 (ENSLBEG00000017896) #24 cdk8 (ENSLBEG00000017850) #25 wasf3b (ENSLBEG00000017818) #26 GPR12 (ENSLBEG00000017797) #27 usp12a (ENSLBEG00000017748) #28 rpl21 (ENSLBEG00000017677) #30 gtf3ab (ENSLBEG00000017641) lnx2a (ENSLBEG00000017565) #31 si:ch211-140b10.6 (ENSLBEG00000017505) #32 urad (ENSLBEG00000017466) #34 pdx1 (ENSLBEG00000017455) #33 ENSLBEG00000017422 #35 pan3 (ENSLBEG00000017330) #36 Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661.m.a #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Perciformes ANCESTRAL SPECIES 21 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661.m.a #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Perciformes_a ANCESTRAL SPECIES 22 ENSGT00640000091497.a ENSGT00390000011053 ENSGT01100000266426 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661.m.a #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Pike perch MODERN SPECIES 58 fam162a (ENSSLUG00000015431) mix23 (ENSSLUG00000015445) ENSSLUG00000015454 cst14a.1 (ENSSLUG00000015464) ENSSLUG00000015478 drd3 (ENSSLUG00000015494) #12 qtrt2 (ENSSLUG00000015673) #13 ccdc191 (ENSSLUG00000015693) #14 zdhhc23b (ENSSLUG00000015718) #15 GRAMD1C (ENSSLUG00000015729) #16 ATP6V1A (ENSSLUG00000015747) #17 naa50 (ENSSLUG00000015777) #18 USF3 (ENSSLUG00000015800) #19 boc (ENSSLUG00000015810) #20 spice1 (ENSSLUG00000015828) #21 SHISA2 (ENSSLUG00000015839) #22 ATP8A2 (ENSSLUG00000016155) #23 rnf6 (ENSSLUG00000020940) #24 cdk8 (ENSSLUG00000020959) #25 wasf3b (ENSSLUG00000021027) #26 GPR12 (ENSSLUG00000021036) #27 usp12a (ENSSLUG00000021043) #28 rpl21 (ENSSLUG00000021154) #30 gtf3ab (ENSSLUG00000021162) lnx2a (ENSSLUG00000021166) #31 si:ch211-140b10.6 (ENSSLUG00000021177) #32 pdx1 (ENSSLUG00000021181) #33 urad (ENSSLUG00000021183) #34 ENSSLUG00000021188 #35 pan3 (ENSSLUG00000021215) #36 flt1 (ENSSLUG00000001549) #37 Cottioidei ANCESTRAL SPECIES 21 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000167204 ENSGT00940000159661.m.a #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Stickleback MODERN SPECIES 20 vipr1b (ENSGACG00000003341) ENSGACG00000003337 KPNA1 (ENSGACG00000003285) fam162a (ENSGACG00000003283) mix23 (ENSGACG00000003271) ENSGACG00000003266 drd3 (ENSGACG00000003265) #12 qtrt2 (ENSGACG00000003260) #13 ccdc191 (ENSGACG00000003254) #14 zdhhc23b (ENSGACG00000003251) #15 GRAMD1C (ENSGACG00000003247) #16 ATP6V1A (ENSGACG00000003211) #17 naa50 (ENSGACG00000003207) #18 USF3 (ENSGACG00000003204) #19 spice1 (ENSGACG00000003186) #21 SHISA2 (ENSGACG00000003182) #22 ATP8A2 (ENSGACG00000003172) #23 rnf6 (ENSGACG00000003167) #24 cdk8 (ENSGACG00000003151) #25 wasf3b (ENSGACG00000003147) #26 GPR12 (ENSGACG00000003145) #27 usp12a (ENSGACG00000003114) #28 rpl21 (ENSGACG00000003110) #30 gtf3ab (ENSGACG00000003107) lnx2a (ENSGACG00000003102) #31 si:ch211-140b10.6 (ENSGACG00000003100) #32 pdx1 (ENSGACG00000003099) #33 urad (ENSGACG00000003095) #34 ENSGACG00000003094 #35 ENSGACG00000003090 #35 pan3 (ENSGACG00000003081) #36 Lumpfish MODERN SPECIES 12 fam162a (ENSCLMG00005021184) mix23 (ENSCLMG00005021185) cst14a.1 (ENSCLMG00005021187) ENSCLMG00005021188 drd3 (ENSCLMG00005021195) #12 qtrt2 (ENSCLMG00005021209) #13 ccdc191 (ENSCLMG00005021210) #14 zdhhc23b (ENSCLMG00005021211) #15 GRAMD1C (ENSCLMG00005021212) #16 ENSCLMG00005021214 #16 ATP6V1A (ENSCLMG00005021215) #17 naa50 (ENSCLMG00005021216) #18 ENSCLMG00005021217 #19 boc (ENSCLMG00005021218) #20 spice1 (ENSCLMG00005021221) #21 SHISA2 (ENSCLMG00005021222) #22 ATP8A2 (ENSCLMG00005021233) #23 rnf6 (ENSCLMG00005021749) #24 cdk8 (ENSCLMG00005021750) #25 wasf3b (ENSCLMG00005021795) #26 GPR12 (ENSCLMG00005021797) #27 usp12a (ENSCLMG00005021799) #28 rpl21 (ENSCLMG00005021802) #30 gtf3ab (ENSCLMG00005021803) lnx2a (ENSCLMG00005021805) #31 si:ch211-140b10.6 (ENSCLMG00005021808) #32 pdx1 (ENSCLMG00005021810) #33 urad (ENSCLMG00005021812) #34 ENSCLMG00005021814 #35 pan3 (ENSCLMG00005021822) #36 flt1 (ENSCLMG00005021994) #37 Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661.n #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00640000091497.a ENSGT00390000011053 ENSGT01030000235167 ENSGT00940000154826 ENSGT00940000165845.c.a ENSGT00940000159661.n #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.d.a.a #17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 European seabass MODERN SPECIES 8 ENSDLAG00005034933 CSTA (ENSDLAG00005009815) MIX23 (ENSDLAG00005009790) ENSDLAG00005020034 ENSDLAG00005029962 drd3 (ENSDLAG00005009728) #12 qtrt2 (ENSDLAG00005009711) #13 ccdc191 (ENSDLAG00005009684) #14 zdhhc23b (ENSDLAG00005009675) #15 GRAMD1C (ENSDLAG00005009661) #16 ATP6V1A (ENSDLAG00005009564) #17 naa50 (ENSDLAG00005027949) #18 ENSDLAG00005009517 #19 boc (ENSDLAG00005009502) #20 spice1 (ENSDLAG00005009486) #21 ENSDLAG00005009482 #22 ATP8A2 (ENSDLAG00005004031) #23 rnf6 (ENSDLAG00005003782) #24 cdk8 (ENSDLAG00005003634) #25 wasf3b (ENSDLAG00005003612) #26 GPR12 (ENSDLAG00005028722) #27 rpl21 (ENSDLAG00005003438) #30 usp12a (ENSDLAG00005003488) #28 gtf3ab (ENSDLAG00005003396) lnx2a (ENSDLAG00005003351) #31 si:ch211-140b10.6 (ENSDLAG00005003325) #32 PRHOXNB (ENSDLAG00005031716) #34 pdx1 (ENSDLAG00005029955) #33 pan3 (ENSDLAG00005003116) #36 flt1 (ENSDLAG00005002274) #37 ENSDLAG00005002258 Large yellow croaker MODERN SPECIES 494 ENSLCRG00005022230 ENSLCRG00005022231 ENSLCRG00005022232 ENSLCRG00005022234 ENSLCRG00005022235 drd3 (ENSLCRG00005022236) #12 qtrt2 (ENSLCRG00005022237) #13 ccdc191 (ENSLCRG00005022238) #14 zdhhc23b (ENSLCRG00005022239) #15 GRAMD1C (ENSLCRG00005022242) #16 atp6v1aa (ENSLCRG00005022243) #17 naa50 (ENSLCRG00005022245) #18 USF3 (ENSLCRG00005022247) #19 boc (ENSLCRG00005022248) #20 spice1 (ENSLCRG00005022249) #21 SHISA2 (ENSLCRG00005022251) #22 ATP8A2 (ENSLCRG00005022300) #23 rnf6 (ENSLCRG00005023065) #24 cdk8 (ENSLCRG00005023071) #25 wasf3b (ENSLCRG00005023166) #26 GPR12 (ENSLCRG00005023167) #27 usp12a (ENSLCRG00005023169) #28 rpl21 (ENSLCRG00005023177) #30 gtf3ab (ENSLCRG00005023178) lnx2a (ENSLCRG00005023179) #31 si:ch211-140b10.6 (ENSLCRG00005023180) #32 pdx1 (ENSLCRG00005023181) #33 urad (ENSLCRG00005023182) #34 pan3 (ENSLCRG00005023183) #36 flt1 (ENSLCRG00005023197) #37 ENSLCRG00005023249 Gilthead seabream MODERN SPECIES 10 ENSSAUG00010014582 ENSSAUG00010014579 CSTA (ENSSAUG00010014574) cst14a.1 (ENSSAUG00010014569) ENSSAUG00010014565 drd3 (ENSSAUG00010014562) #12 qtrt2 (ENSSAUG00010014560) #13 ccdc191 (ENSSAUG00010014556) #14 zdhhc23b (ENSSAUG00010014555) #15 GRAMD1C (ENSSAUG00010014554) #16 ATP6V1A (ENSSAUG00010014547) #17 naa50 (ENSSAUG00010014538) #18 USF3 (ENSSAUG00010014534) #19 boc (ENSSAUG00010014528) #20 spice1 (ENSSAUG00010014521) #21 SHISA2 (ENSSAUG00010014518) #22 ATP8A2 (ENSSAUG00010003787) #23 rnf6 (ENSSAUG00010003475) #24 cdk8 (ENSSAUG00010003382) #25 wasf3b (ENSSAUG00010003372) #26 GPR12 (ENSSAUG00010003369) #27 usp12a (ENSSAUG00010003352) #28 gtf3ab (ENSSAUG00010003349) lnx2a (ENSSAUG00010003339) #31 si:ch211-140b10.6 (ENSSAUG00010003336) #32 rpl21 (ENSSAUG00010003332) #30 pdx1 (ENSSAUG00010003328) #33 urad (ENSSAUG00010003327) #34 ENSSAUG00010003325 #35 pan3 (ENSSAUG00010003157) #36 flt1 (ENSSAUG00010003102) #37 Pinecone sodierfish MODERN SPECIES 12 fam162a (ENSMMDG00005004037) mix23 (ENSMMDG00005004048) cst14a.1 (ENSMMDG00005004058) ENSMMDG00005004071 drd3 (ENSMMDG00005004131) #12 qtrt2 (ENSMMDG00005004916) #13 ccdc191 (ENSMMDG00005004923) #14 zdhhc23b (ENSMMDG00005004931) #15 GRAMD1C (ENSMMDG00005004936) #16 ENSMMDG00005004938 #16 ATP6V1A (ENSMMDG00005004945) #17 naa50 (ENSMMDG00005004955) #18 USF3 (ENSMMDG00005004967) #19 boc (ENSMMDG00005004971) #20 spice1 (ENSMMDG00005004976) #21 SHISA2 (ENSMMDG00005004981) #22 ATP8A2 (ENSMMDG00005004985) #23 rnf6 (ENSMMDG00005004988) #24 cdk8 (ENSMMDG00005005001) #25 wasf3b (ENSMMDG00005005526) #26 GPR12 (ENSMMDG00005005527) #27 usp12a (ENSMMDG00005005529) #28 rpl21 (ENSMMDG00005005567) #30 gtf3ab (ENSMMDG00005005571) lnx2a (ENSMMDG00005005578) #31 si:ch211-140b10.6 (ENSMMDG00005005580) #32 pdx1 (ENSMMDG00005005582) #33 urad (ENSMMDG00005005583) #34 pan3 (ENSMMDG00005005607) #36 flt1 (ENSMMDG00005006211) #37 ENSMMDG00005006251 Cod MODERN SPECIES 15 ENSGMOG00000033462 ENSGMOG00000002580 ENSGMOG00000000428 drd3 (ENSGMOG00000029969) #12 qtrt2 (ENSGMOG00000015771) #13 ccdc191 (ENSGMOG00000015707) #14 zdhhc23b (ENSGMOG00000015691) #15 GRAMD1C (ENSGMOG00000015652) #16 ATP6V1A (ENSGMOG00000015627) #17 naa50 (ENSGMOG00000015617) #18 USF3 (ENSGMOG00000028285) #19 ENSGMOG00000027689 boc (ENSGMOG00000030670) #20 ENSGMOG00000026850 spice1 (ENSGMOG00000031528) #21 ENSGMOG00000024393 #22 ENSGMOG00000015425 #23 rnf6 (ENSGMOG00000032617) #24 cdk8 (ENSGMOG00000015383) #25 wasf3b (ENSGMOG00000015343) #26 GPR12 (ENSGMOG00000005134) #27 usp12a (ENSGMOG00000015314) #28 rpl21 (ENSGMOG00000015298) #30 gtf3ab (ENSGMOG00000015268) lnx2a (ENSGMOG00000015243) #31 si:ch211-140b10.6 (ENSGMOG00000030301) #32 pdx1 (ENSGMOG00000015225) #33 urad (ENSGMOG00000015217) #34 ENSGMOG00000023570 #35 pan3 (ENSGMOG00000015169) #36 ENSGMOG00000028398 #37 Otomorpha ANCESTRAL SPECIES 3 ENSGT00390000011053 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.c.a ##17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00940000161555 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Clupeiformes ANCESTRAL SPECIES 47 ENSGT00940000155822 ENSGT00940000158036 ENSGT00650000094897 ENSGT00390000011552 ENSGT00940000156700.c ENSGT00390000017498 ENSGT00940000159988.c ENSGT00940000154847.n.a ENSGT00640000091535 ENSGT00500000044993 ENSGT00940000158760 ENSGT00940000156473.f.a ENSGT00940000158635.c ENSGT00940000159124 ENSGT00940000156130.a.a ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 ENSGT00940000165120 Denticle herring DUPLICATION Denticle herring MODERN SPECIES 11 cct5 (ENSDCDG00000020187) MTRR (ENSDCDG00000020268) sema5a (ENSDCDG00000020294) ENSDCDG00000020443 timm21 (ENSDCDG00000020445) NETO1 (ENSDCDG00000020448) zgc:161973 (ENSDCDG00000020463) cbln2b (ENSDCDG00000020467) SOCS6 (ENSDCDG00000020473) RTTN (ENSDCDG00000020476) dok6 (ENSDCDG00000020478) CRISPLD1 (ENSDCDG00000020480) pi15a (ENSDCDG00000020481) gdap1 (ENSDCDG00000020483) JPH1 (ENSDCDG00000020488) SHISA2 (ENSDCDG00000020489) #22 ATP8A2 (ENSDCDG00000020556) #23 rnf6 (ENSDCDG00000023865) #24 cdk8 (ENSDCDG00000023870) #25 wasf3b (ENSDCDG00000023955) #26 GPR12 (ENSDCDG00000023959) #27 usp12a (ENSDCDG00000023962) #28 rpl21 (ENSDCDG00000024059) #30 lnx2a (ENSDCDG00000024065) #31 si:ch211-140b10.6 (ENSDCDG00000024069) #32 pdx1 (ENSDCDG00000024070) #33 urad (ENSDCDG00000024072) #34 ENSDCDG00000024074 #35 pan3 (ENSDCDG00000024102) #36 flt1 (ENSDCDG00000025035) #37 ENSDCDG00000025040 Denticle herring MODERN SPECIES 16 CNGA2 (ENSDCDG00000034552) chmp1b (ENSDCDG00000034548) BRWD3 (ENSDCDG00000034472) ENSDCDG00000034455 ENSDCDG00000034449 apool (ENSDCDG00000034445) agtr2 (ENSDCDG00000034444) sh2d1aa (ENSDCDG00000034442) TENM1 (ENSDCDG00000033349) smarca1 (ENSDCDG00000032651) ENSDCDG00000032618 ENSDCDG00000032603 amer1 (ENSDCDG00000032602) asb12a (ENSDCDG00000032601) mtmr8 (ENSDCDG00000032582) shisa2a (ENSDCDG00000032575) #22 zc4h2 (ENSDCDG00000032573) ZC3H12B (ENSDCDG00000032570) las1l (ENSDCDG00000032558) camlg (ENSDCDG00000032551) psmb1 (ENSDCDG00000032550) SEC24A (ENSDCDG00000031648) sar1b (ENSDCDG00000031601) JADE2 (ENSDCDG00000031595) cdkn2aipnl (ENSDCDG00000031591) ube2b (ENSDCDG00000031585) ppp2cab (ENSDCDG00000031579) skp1 (ENSDCDG00000031573) tcf7 (ENSDCDG00000031561) vdac1 (ENSDCDG00000031475) C5orf15 (ENSDCDG00000031470) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 24 ENSCHAG00000004016 ENSCHAG00000004034 ENSCHAG00000004055 ENSCHAG00000004059 ENSCHAG00000004333 ENSCHAG00000004362 si:ch211-271b14.1 (ENSCHAG00000004371) zgc:175280 (ENSCHAG00000004745) CASR (ENSCHAG00000005118) b4galt4 (ENSCHAG00000005258) si:dkey-251i10.3 (ENSCHAG00000005275) zbtb20 (ENSCHAG00000005309) ENSCHAG00000005315 ENSCHAG00000005334 ENSCHAG00000005354 ENSCHAG00000005364 #22 ENSCHAG00000005382 ENSCHAG00000005520 ENSCHAG00000005538 abhd10a (ENSCHAG00000005547) ENSCHAG00000005583 ENSCHAG00000005599 IGSF9B (ENSCHAG00000005631) ENSCHAG00000005772 anapc13 (ENSCHAG00000007090) sc5d (ENSCHAG00000007108) zgc:123105 (ENSCHAG00000007129) ENSCHAG00000007161 ENSCHAG00000007174 ENSCHAG00000007202 ENSCHAG00000007233 Atlantic herring MODERN SPECIES 8 cmbl (ENSCHAG00000011112) sema5a (ENSCHAG00000011226) ENSCHAG00000013235 timm21 (ENSCHAG00000013242) NETO1 (ENSCHAG00000013249) ENSCHAG00000013299 cbln2b (ENSCHAG00000013309) SOCS6 (ENSCHAG00000013346) RTTN (ENSCHAG00000013356) ENSCHAG00000013630 dok6 (ENSCHAG00000013662) CRISPLD1 (ENSCHAG00000013700) pi15a (ENSCHAG00000013919) gdap1 (ENSCHAG00000013933) JPH1 (ENSCHAG00000013949) SHISA2 (ENSCHAG00000013955) #22 ENSCHAG00000013991 #23 rnf6 (ENSCHAG00000015549) #24 cdk8 (ENSCHAG00000015572) #25 wasf3b (ENSCHAG00000015892) #26 pdx1 (ENSCHAG00000015905) #33 si:ch211-140b10.6 (ENSCHAG00000015909) #32 lnx2a (ENSCHAG00000015948) #31 pan3 (ENSCHAG00000015966) #36 flt1 (ENSCHAG00000016175) #37 ENSCHAG00000016931 ENSCHAG00000016990 ENSCHAG00000017010 ENSCHAG00000017035 c1qtnf9 (ENSCHAG00000017323) ENSCHAG00000017366 Atlantic herring MODERN SPECIES 24 zdhhc15a (ENSCHAG00000018387) CNGA2 (ENSCHAG00000018572) chmp1b (ENSCHAG00000018937) BRWD3 (ENSCHAG00000019126) apool (ENSCHAG00000020365) ENSCHAG00000020382 ENSCHAG00000020598 agtr2 (ENSCHAG00000020604) TENM1 (ENSCHAG00000020629) smarca1 (ENSCHAG00000021368) ENSCHAG00000022655 ENSCHAG00000022682 amer1 (ENSCHAG00000023237) asb12a (ENSCHAG00000023243) mtmr8 (ENSCHAG00000023277) shisa2a (ENSCHAG00000023350) #22 zc4h2 (ENSCHAG00000023355) ZC3H12B (ENSCHAG00000023376) camlg (ENSCHAG00000023398) SEC24A (ENSCHAG00000023429) sar1b (ENSCHAG00000023826) JADE2 (ENSCHAG00000023829) cdkn2aipnl (ENSCHAG00000023831) ube2b (ENSCHAG00000023837) CDKL3 (ENSCHAG00000023901) ppp2cab (ENSCHAG00000023911) SKP1 (ENSCHAG00000023916) tcf7 (ENSCHAG00000023937) vdac1 (ENSCHAG00000023980) C5orf15 (ENSCHAG00000024136) fstl4 (ENSCHAG00000024157) Otophysi ANCESTRAL SPECIES 42 ENSGT00390000011053 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.c.a ##17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00940000161555 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104.d #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Cyprinoidei ANCESTRAL SPECIES 20 ENSGT00940000154826.e ENSGT00390000011053 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A.m #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.c.a ##17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104.c.a #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504.g #36 ENSGT00940000158713 #37 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 16 mix23 (ENSDARG00000045351) fam162a (ENSDARG00000063344) KPNA1 (ENSDARG00000016360) ENSDARG00000089919 drd3 (ENSDARG00000032131) #12 qtrt2 (ENSDARG00000016093) #13 ccdc191 (ENSDARG00000027851) #14 zdhhc23b (ENSDARG00000003899) #15 GRAMD1C (ENSDARG00000076238) #16 ATP6V1A (ENSDARG00000076318) ##17 naa50 (ENSDARG00000027825) #18 USF3 (ENSDARG00000077431) #19 ENSDARG00000097532 boc (ENSDARG00000074335) #20 spice1 (ENSDARG00000004647) #21 SHISA2 (ENSDARG00000088232) #22 ATP8A2 (ENSDARG00000077492) #23 rnf6 (ENSDARG00000077955) #24 cdk8 (ENSDARG00000016496) #25 wasf3b (ENSDARG00000062948) #26 GPR12 (ENSDARG00000062934) #27 usp12a (ENSDARG00000078109) #28 ENSDARG00000113148 rpl21 (ENSDARG00000010516) #30 gtf3ab (ENSDARG00000071583) lnx2a (ENSDARG00000029177) #31 si:ch211-140b10.6 (ENSDARG00000045342) #32 pdx1 (ENSDARG00000002779) #33 urad (ENSDARG00000071579) #34 ENSDARG00000058503 #35 pan3 (ENSDARG00000031637) #36 Zebrafish MODERN SPECIES 20 ENSDARG00000094417 hs3st1l2 (ENSDARG00000035578) cds2 (ENSDARG00000035577) arhgap25 (ENSDARG00000061784) bmp10 (ENSDARG00000061769) ENSDARG00000078002 sh2d1aa (ENSDARG00000095348) TENM1 (ENSDARG00000003403) smarca1 (ENSDARG00000012776) ENSDARG00000093081 ENSDARG00000076998 ENSDARG00000061746 amer1 (ENSDARG00000079624) asb12a (ENSDARG00000017086) mtmr8 (ENSDARG00000008592) shisa2a (ENSDARG00000034138) #22 zc4h2 (ENSDARG00000015314) ZC3H12B (ENSDARG00000062463) las1l (ENSDARG00000062457) msna (ENSDARG00000058128) fdx1b (ENSDARG00000038956) ENSDARG00000093708 GPR83 (ENSDARG00000058120) ENSDARG00000094418 ENSDARG00000092228 ENSDARG00000092602 ENSDARG00000068624 rpl36a (ENSDARG00000058105) glra4b (ENSDARG00000058103) aifm1 (ENSDARG00000058088) tnfsf10l4 (ENSDARG00000058068) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 45 ENSGT00990000204628.b ENSGT00940000154826.e.a.b ENSGT00390000011053.p ENSGT00640000091497.a.s ENSGT01050000244950.a.a.a.e ENSGT00940000165845.c.a.b ENSGT00940000159661.o #12 ENSGT00530000063679.A.m.a #13 ENSGT00940000156558.a.a.b #15 ENSGT00940000158013.q #16 ENSGT00550000074787.c.a.a ##17 ENSGT00390000009110.f #18 ENSGT00390000015759.c #19 ENSGT00940000158810.b #20 ENSGT00390000006207.a #21 ENSGT00940000157443.l.a #22 ENSGT00940000157332.j #23 ENSGT00940000158530.s #24 ENSGT00940000157104.c.b #25 ENSGT00950000182962.a.a.d.c #26 ENSGT01060000248564.b.a.b.a.c #27 ENSGT00940000153284.a.mc.b.d #28 ENSGT00950000182922.b.k #30 ENSGT00940000155647.cb.b ENSGT00940000158381.d #31 ENSGT00390000003643.p #32 ENSGT00940000163955.k #33 ENSGT00390000002395.d #34 ENSGT00940000167274.e #35 ENSGT00390000001504.g.b #36 ENSGT00390000001504.g.a.b #36 Goldfish MODERN SPECIES 43 vipr1b (ENSCARG00000034944) ENSCARG00000034840 CSTB (ENSCARG00000034825) mix23 (ENSCARG00000034792) fam162a (ENSCARG00000034785) KPNA1 (ENSCARG00000034714) ENSCARG00000034686 drd3 (ENSCARG00000034679) #12 qtrt2 (ENSCARG00000034646) #13 GRAMD1C (ENSCARG00000034597) #16 ATP6V1A (ENSCARG00000034552) ##17 naa50 (ENSCARG00000034519) #18 USF3 (ENSCARG00000034510) #19 boc (ENSCARG00000034335) #20 spice1 (ENSCARG00000034277) #21 SHISA2 (ENSCARG00000034263) #22 ATP8A2 (ENSCARG00000024914) #23 rnf6 (ENSCARG00000024595) #24 cdk8 (ENSCARG00000024403) #25 wasf3b (ENSCARG00000024364) #26 GPR12 (ENSCARG00000024361) #27 usp12a (ENSCARG00000023800) #28 rpl21 (ENSCARG00000023757) #30 gtf3ab (ENSCARG00000023748) lnx2a (ENSCARG00000023730) #31 pdx1 (ENSCARG00000023723) #33 urad (ENSCARG00000023713) #34 pan3 (ENSCARG00000023454) #36 flt1 (ENSCARG00000023355) #37 ENSCARG00000023305 ENSCARG00000023288 Cyprininae_a ANCESTRAL SPECIES 57 ENSGT00990000204628.b ENSGT00940000154826.e.a.b ENSGT00390000011053.p ENSGT00640000091497.a.s ENSGT01050000244950.a.a.a.e ENSGT00940000165845.c.a.b ENSGT00940000159661.o #12 ENSGT00530000063679.A.m.a #13 ENSGT00940000156558.a.a.b #15 ENSGT00940000158013.q #16 ENSGT00550000074787.c.a.a ##17 ENSGT00390000009110.f #18 ENSGT00390000015759.c #19 ENSGT00940000158810.b #20 ENSGT00390000006207.a #21 ENSGT00940000157443.l.a #22 ENSGT00940000157332.j #23 ENSGT00940000158530.s #24 ENSGT00940000157104.c.b #25 ENSGT00950000182962.a.a.d.c #26 ENSGT01060000248564.b.a.b.a.c #27 ENSGT00940000153284.a.mc.b.d #28 ENSGT00950000182922.b.k #30 ENSGT00940000155647.cb.b ENSGT00940000158381.d #31 ENSGT00390000003643.p #32 ENSGT00940000163955.k #33 ENSGT00390000002395.d #34 ENSGT00940000167274.e #35 ENSGT00390000001504.g.b #36 ENSGT00390000001504.g.a.b #36 Golden-line barbel MODERN SPECIES 64 ENSSGRG00000044576 mix23 (ENSSGRG00000044578) fam162a (ENSSGRG00000044585) KPNA1 (ENSSGRG00000044627) ENSSGRG00000045891 drd3 (ENSSGRG00000045892) #12 qtrt2 (ENSSGRG00000045893) #13 zdhhc23b (ENSSGRG00000045897) #15 GRAMD1C (ENSSGRG00000045899) #16 ENSSGRG00000045900 #16 ATP6V1A (ENSSGRG00000045903) ##17 naa50 (ENSSGRG00000046084) #18 USF3 (ENSSGRG00000046086) #19 boc (ENSSGRG00000046087) #20 spice1 (ENSSGRG00000046090) #21 SHISA2 (ENSSGRG00000046092) #22 ATP8A2 (ENSSGRG00000046098) #23 rnf6 (ENSSGRG00000046410) #24 cdk8 (ENSSGRG00000046414) #25 wasf3b (ENSSGRG00000046415) #26 GPR12 (ENSSGRG00000046416) #27 usp12a (ENSSGRG00000046425) #28 rpl21 (ENSSGRG00000046503) #30 gtf3ab (ENSSGRG00000046517) lnx2a (ENSSGRG00000046521) #31 si:ch211-140b10.6 (ENSSGRG00000046522) #32 pdx1 (ENSSGRG00000046523) #33 urad (ENSSGRG00000046524) #34 flt1 (ENSSGRG00000046525) #37 ENSSGRG00000046530 #35 pan3 (ENSSGRG00000046534) #36 Common carp reference MODERN SPECIES 14 vipr1b (ENSCCRG00000003284) ENSCCRG00000050637 cst14a.1 (ENSCCRG00000023855) fam162a (ENSCCRG00000055380) ENSCCRG00000073127 ENSCCRG00000071120 drd3 (ENSCCRG00000019745) #12 qtrt2 (ENSCCRG00000019738) #13 zdhhc23b (ENSCCRG00000019715) #15 GRAMD1C (ENSCCRG00000055261) #16 ATP6V1A (ENSCCRG00000010222) ##17 naa50 (ENSCCRG00000067340) #18 USF3 (ENSCCRG00000010143) #19 boc (ENSCCRG00000020879) #20 spice1 (ENSCCRG00000033480) #21 ENSCCRG00000053641 #22 ENSCCRG00000042137 #23 cdk8 (ENSCCRG00000005325) #25 GPR12 (ENSCCRG00000064349) #27 wasf3b (ENSCCRG00000073791) #26 usp12a (ENSCCRG00000007576) #28 ENSCCRG00000066603 rpl21 (ENSCCRG00000007511) #30 lnx2a (ENSCCRG00000007712) #31 pdx1 (ENSCCRG00000027679) #33 urad (ENSCCRG00000080030) #34 ENSCCRG00000077937 #35 pan3 (ENSCCRG00000027699) #36 flt1 (ENSCCRG00000027874) #37 ENSCCRG00000067037 ENSCCRG00000015594 Cyprininae ANCESTRAL SPECIES 414 ENSGT00390000006207.b #21 ENSGT00940000157443.l.b #22 ENSGT00940000157332.i #23 ENSGT00940000158530.t #24 ENSGT00940000157104.c.a #25 ENSGT00950000182962.a.a.d.d #26 ENSGT01060000248564.b.a.b.a.d #27 ENSGT00940000153284.a.mc.b.c #28 ENSGT00950000182922.b.l #30 ENSGT00940000155647.cb.a ENSGT00940000158381.c #31 ENSGT00390000003643.o #32 ENSGT00940000163955.l #33 ENSGT00390000002395.c #34 ENSGT00940000167274.f #35 ENSGT00390000001504.g.a.a #36 ENSGT00940000158713.b #37 Goldfish DUPLICATION Goldfish MODERN SPECIES 543 spice1 (ENSCARG00000065575) #21 SHISA2 (ENSCARG00000065586) #22 ENSCARG00000065656 #23 Goldfish MODERN SPECIES 16 drd3 (ENSCARG00000011203) #12 qtrt2 (ENSCARG00000011214) #13 ccdc191 (ENSCARG00000011240) #14 zdhhc23b (ENSCARG00000011259) #15 GRAMD1C (ENSCARG00000011267) #16 ATP6V1A (ENSCARG00000011291) ##17 ENSCARG00000011411 ENSCARG00000011423 naa50 (ENSCARG00000011428) #18 USF3 (ENSCARG00000011468) #19 boc (ENSCARG00000011533) #20 ENSCARG00000011569 TMPRSS7 (ENSCARG00000011738) flt1 (ENSCARG00000011773) #37 PAN3 (ENSCARG00000011834) #36 SHISA2 (ENSCARG00000011897) #22 ENSCARG00000011953 #23 rnf6 (ENSCARG00000012700) #24 cdk8 (ENSCARG00000012746) #25 wasf3b (ENSCARG00000013714) #26 GPR12 (ENSCARG00000013722) #27 usp12a (ENSCARG00000013734) #28 rpl21 (ENSCARG00000013765) #30 gtf3ab (ENSCARG00000013776) lnx2a (ENSCARG00000013796) #31 si:ch211-140b10.6 (ENSCARG00000013805) #32 pdx1 (ENSCARG00000013807) #33 urad (ENSCARG00000013810) #34 ENSCARG00000013815 #35 pan3 (ENSCARG00000013889) #36 flt1 (ENSCARG00000015256) #37 Cyprininae_a ANCESTRAL SPECIES 19 ENSGT00640000091497.a.t ENSGT01050000244950.a.a.a.f ENSGT00940000165845.c.a.a ENSGT00940000159661.p #12 ENSGT00530000063679.A.m.b #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a.a #15 ENSGT00940000158013.r #16 ENSGT00550000074787.c.a.b ##17 ENSGT01100000263538.A.b.d.a.a ENSGT00940000164100.B.a.a.c.a ENSGT00390000009110.e #18 ENSGT00390000015759.d #19 ENSGT00940000158810.a #20 ENSGT00390000006207.b #21 ENSGT00940000157443.l.b #22 ENSGT00940000157332.i #23 ENSGT00940000158530.t #24 ENSGT00940000157104.c.a #25 ENSGT00950000182962.a.a.d.d #26 ENSGT01060000248564.b.a.b.a.d #27 ENSGT00940000153284.a.mc.b.c #28 ENSGT00950000182922.b.l #30 ENSGT00940000155647.cb.a ENSGT00940000158381.c #31 ENSGT00390000003643.o #32 ENSGT00940000167274.f #35 ENSGT00390000001504.g.a.a #36 ENSGT00940000158713.b #37 ENSGT00940000165120.d ENSGT00940000160085 Golden-line barbel MODERN SPECIES 138 mix23 (ENSSGRG00000027459) fam162a (ENSSGRG00000027458) ENSSGRG00000027456 KPNA1 (ENSSGRG00000026253) ENSSGRG00000026236 #12 drd3 (ENSSGRG00000026235) #12 qtrt2 (ENSSGRG00000026232) #13 ccdc191 (ENSSGRG00000026231) #14 zdhhc23b (ENSSGRG00000026230) #15 GRAMD1C (ENSSGRG00000026227) #16 ATP6V1A (ENSSGRG00000026058) ##17 naa50 (ENSSGRG00000026056) #18 USF3 (ENSSGRG00000026054) #19 boc (ENSSGRG00000025910) #20 spice1 (ENSSGRG00000025904) #21 SHISA2 (ENSSGRG00000025901) #22 ENSSGRG00000025638 #23 rnf6 (ENSSGRG00000025620) #24 cdk8 (ENSSGRG00000025128) #25 wasf3b (ENSSGRG00000025123) #26 GPR12 (ENSSGRG00000025122) #27 usp12a (ENSSGRG00000025100) #28 rpl21 (ENSSGRG00000025099) #30 gtf3ab (ENSSGRG00000025066) ENSSGRG00000025064 lnx2a (ENSSGRG00000025063) #31 si:ch211-140b10.6 (ENSSGRG00000025062) #32 pdx1 (ENSSGRG00000025061) #33 pan3 (ENSSGRG00000024997) #36 flt1 (ENSSGRG00000024840) #37 ENSSGRG00000024834 Common carp reference MODERN SPECIES 40 KPNA1 (ENSCCRG00000019804) ENSCCRG00000031981 drd3 (ENSCCRG00000031979) #12 ENSCCRG00000070844 qtrt2 (ENSCCRG00000031977) #13 ccdc191 (ENSCCRG00000010231) #14 zdhhc23b (ENSCCRG00000010229) #15 GRAMD1C (ENSCCRG00000010225) #16 ATP6V1A (ENSCCRG00000019685) ##17 ENSCCRG00000010215 ENSCCRG00000072746 naa50 (ENSCCRG00000071798) #18 USF3 (ENSCCRG00000082373) #19 boc (ENSCCRG00000010138) #20 spice1 (ENSCCRG00000027631) #21 ENSCCRG00000057454 #22 ENSCCRG00000050173 #23 rnf6 (ENSCCRG00000068404) #24 cdk8 (ENSCCRG00000052073) #25 wasf3b (ENSCCRG00000005701) #26 GPR12 (ENSCCRG00000068519) #27 rpl21 (ENSCCRG00000068151) #30 usp12a (ENSCCRG00000022679) #28 gtf3ab (ENSCCRG00000005024) pdx1 (ENSCCRG00000068168) #33 ENSCCRG00000005031 #31 ENSCCRG00000080210 #35 pan3 (ENSCCRG00000041721) #36 flt1 (ENSCCRG00000045302) #37 ENSCCRG00000076389 ENSCCRG00000020183 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 50 ENSGT00950000182924.A.b.b ENSGT00940000166629.c ENSGT00940000158877.a.b ENSGT00950000183015.A.k ENSGT00940000156279.e.a ENSGT01100000263476.E.b.b.a.a.b ENSGT00980000198660.a.b.a ENSGT00940000155920.p.b ENSGT01030000234566.e.b.b.b.m ENSGT00940000157297.p.b ENSGT00940000159803.l ENSGT00940000154103.b ENSGT00530000063529.B.d ENSGT00940000153902.b.a.g ENSGT00940000162717.c ENSGT00940000157443.m.a #22 ENSGT00390000018389.i ENSGT00940000159316.u.b ENSGT00390000014785.q ENSGT01090000260082.d.a.a.d.f ENSGT00940000166318.b ENSGT00940000154633.jd.b ENSGT00940000154336.cd ENSGT00940000162079.m ENSGT00940000164220.b.b.c.b ENSGT00980000198690.c ENSGT00940000166502.a ENSGT00940000156455.b ENSGT00940000160994.h ENSGT00940000154442.hd ENSGT00660000097471.a Goldfish MODERN SPECIES 23 ENSCARG00000068755 hs3st1l2 (ENSCARG00000068749) cds2 (ENSCARG00000068573) arhgap25 (ENSCARG00000068474) bmp10 (ENSCARG00000068460) ENSCARG00000068410 ENSCARG00000068386 sh2d1aa (ENSCARG00000068379) TENM1 (ENSCARG00000068099) smarca1 (ENSCARG00000065564) ENSCARG00000065339 ARHGEF9 (ENSCARG00000065218) amer1 (ENSCARG00000065182) asb12a (ENSCARG00000065174) mtmr8 (ENSCARG00000065159) shisa2a (ENSCARG00000065150) #22 zc4h2 (ENSCARG00000065140) ZC3H12B (ENSCARG00000065110) las1l (ENSCARG00000065090) msna (ENSCARG00000062618) fdx1b (ENSCARG00000062435) ENSCARG00000062420 GPR83 (ENSCARG00000062400) ENSCARG00000062391 ENSCARG00000062377 ENSCARG00000062350 ENSCARG00000062320 rpl36a (ENSCARG00000062271) glra4b (ENSCARG00000062179) aifm1 (ENSCARG00000058306) casp22 (ENSCARG00000058214) Cyprininae_a ANCESTRAL SPECIES 42 ENSGT00940000166629.c ENSGT00940000158877.a.b ENSGT00950000183015.A.k ENSGT00940000156279.e.a ENSGT01100000263476.E.b.b.a.a.b ENSGT00980000198660.a.a.a ENSGT00980000198660.a.b.a ENSGT00940000155920.p.b ENSGT01030000234566.e.b.b.b.m ENSGT00940000157297.p.b ENSGT00940000159803.l ENSGT00940000160622.`b.b.b ENSGT00530000063529.B.d ENSGT00940000153902.b.a.g ENSGT00940000162717.c ENSGT00940000157443.m.a #22 ENSGT00390000018389.i ENSGT00940000159316.u.b ENSGT00390000014785.q ENSGT01090000260082.d.a.a.d.f ENSGT00940000166318.b ENSGT00940000154633.jd.b ENSGT00940000154336.cd ENSGT00940000162079.m ENSGT00940000164220.b.b.c.b ENSGT00980000198690.c ENSGT00940000166502.a ENSGT00940000156455.b ENSGT00940000160994.h ENSGT00940000154442.hd ENSGT00660000097471.a Common carp reference MODERN SPECIES 15 cds2 (ENSCCRG00000022211) arhgap25 (ENSCCRG00000002472) bmp10 (ENSCCRG00000076706) ENSCCRG00000002465 ENSCCRG00000068727 ENSCCRG00000002457 sh2d1aa (ENSCCRG00000002432) ENSCCRG00000066168 smarca1 (ENSCCRG00000044757) ENSCCRG00000062320 ENSCCRG00000028344 ENSCCRG00000028321 amer1 (ENSCCRG00000027506) asb12a (ENSCCRG00000072190) mtmr8 (ENSCCRG00000027532) shisa2a (ENSCCRG00000047504) #22 zc4h2 (ENSCCRG00000082739) ZC3H12B (ENSCCRG00000068343) las1l (ENSCCRG00000047517) fdx1b (ENSCCRG00000040877) msna (ENSCCRG00000040914) ENSCCRG00000067231 ENSCCRG00000060426 ENSCCRG00000015865 ENSCCRG00000082166 ENSCCRG00000056125 ENSCCRG00000069253 ENSCCRG00000057065 ENSCCRG00000072055 glra4b (ENSCCRG00000008120) aifm1 (ENSCCRG00000005144) Golden-line barbel MODERN SPECIES 229 ENSSGRG00000028531 cds2 (ENSSGRG00000027289) arhgap25 (ENSSGRG00000027259) bmp10 (ENSSGRG00000027257) ENSSGRG00000027256 ENSSGRG00000027255 ENSSGRG00000027254 ENSSGRG00000027251 sh2d1aa (ENSSGRG00000027250) TENM1 (ENSSGRG00000027249) smarca1 (ENSSGRG00000025588) ENSSGRG00000025562 ENSSGRG00000025353 amer1 (ENSSGRG00000025350) mtmr8 (ENSSGRG00000025309) shisa2a (ENSSGRG00000025303) #22 zc4h2 (ENSSGRG00000025300) ZC3H12B (ENSSGRG00000025299) ENSSGRG00000025297 msna (ENSSGRG00000022944) fdx1b (ENSSGRG00000022938) GPR83 (ENSSGRG00000022935) ENSSGRG00000022934 ENSSGRG00000022927 ENSSGRG00000022926 glra4b (ENSSGRG00000022903) aifm1 (ENSSGRG00000021572) casp22 (ENSSGRG00000021542) nono (ENSSGRG00000021541) zgc:113208 (ENSSGRG00000021540) ENSSGRG00000021539 Cyprininae ANCESTRAL SPECIES 31 ENSGT00980000198660.a.b.b ENSGT00940000155920.p.a ENSGT01030000234566.e.b.b.b.n ENSGT00940000157297.p.a ENSGT00940000159803.k ENSGT00940000160622.`b.b ENSGT00530000063529.B.c ENSGT00940000153902.b.a.h ENSGT00940000162717.d ENSGT00940000157443.m.b #22 ENSGT00390000018389.j ENSGT00940000159316.u.a ENSGT00390000014785.r ENSGT01090000260082.d.a.a.d.e ENSGT00940000154633.jd.a ENSGT00940000154336.bd ENSGT00980000198660.a.a ENSGT00940000164220.b.b.d ENSGT00980000198690.d ENSGT00940000161656 ENSGT00940000166502.b ENSGT00940000156455.a ENSGT01070000253816.a.b ENSGT00940000154442.id ENSGT00660000097471.b Goldfish MODERN SPECIES 3271 ENSCARG00000064691 ENSCARG00000064657 sh2d1aa (ENSCARG00000064647) ENSCARG00000064645 ENSCARG00000064642 TENM1 (ENSCARG00000064362) smarca1 (ENSCARG00000064151) ENSCARG00000064069 ARHGEF9 (ENSCARG00000063766) amer1 (ENSCARG00000063729) asb12a (ENSCARG00000063721) mtmr8 (ENSCARG00000063554) shisa2a (ENSCARG00000063527) #22 zc4h2 (ENSCARG00000063508) ZC3H12B (ENSCARG00000063443) ENSCARG00000063364 msna (ENSCARG00000061880) ENSCARG00000061817 ENSCARG00000061812 GPR83 (ENSCARG00000061794) ENSCARG00000061786 RPL36AL (ENSCARG00000061757) glra4b (ENSCARG00000061748) aifm1 (ENSCARG00000070066) tnfsf10l4 (ENSCARG00000070042) nono (ENSCARG00000070037) mtnr1c (ENSCARG00000070026) vma21 (ENSCARG00000070022) Cyprininae_a ANCESTRAL SPECIES ENSGT00940000166629.d ENSGT00940000158877.a.a ENSGT00950000183015.A.l ENSGT00940000156279.e.b ENSGT00980000198660.a.b.b ENSGT00940000155920.p.a ENSGT01030000234566.e.b.b.b.n ENSGT00940000157297.p.a ENSGT00940000159803.k ENSGT00940000160622.`b.b.a ENSGT00530000063529.B.c ENSGT00940000153902.b.a.h ENSGT00940000162717.d ENSGT00940000157443.m.b #22 ENSGT00390000018389.j ENSGT00940000159316.u.a ENSGT00390000014785.r ENSGT01090000260082.d.a.a.d.e ENSGT00940000154633.jd.a ENSGT00940000154336.bd ENSGT00980000198660.a.a.b ENSGT00940000164220.b.b.d ENSGT00980000198690.d ENSGT00940000161656 ENSGT00940000166502.b ENSGT00940000156455.a ENSGT01070000253816.a.b ENSGT00940000154442.id ENSGT00660000097471.b Common carp reference MODERN SPECIES 7 cds2 (ENSCCRG00000048213) bmp10 (ENSCCRG00000074029) ENSCCRG00000067324 arhgap25 (ENSCCRG00000022174) ENSCCRG00000058368 ENSCCRG00000073677 sh2d1aa (ENSCCRG00000002452) ENSCCRG00000002235 smarca1 (ENSCCRG00000019591) ENSCCRG00000065874 ENSCCRG00000061706 ENSCCRG00000044242 amer1 (ENSCCRG00000082144) asb12a (ENSCCRG00000045268) mtmr8 (ENSCCRG00000045591) shisa2a (ENSCCRG00000027508) #22 zc4h2 (ENSCCRG00000055735) ZC3H12B (ENSCCRG00000047506) las1l (ENSCCRG00000081776) msna (ENSCCRG00000000426) ENSCCRG00000071006 ENSCCRG00000031122 ENSCCRG00000034576 ENSCCRG00000059509 ENSCCRG00000052994 rpl36a (ENSCCRG00000051128) glra4b (ENSCCRG00000051127) aifm1 (ENSCCRG00000019418) tnfsf10l4 (ENSCCRG00000019383) nono (ENSCCRG00000070158) mtnr1c (ENSCCRG00000063256) Golden-line barbel MODERN SPECIES 588 ENSSGRG00000018095 arhgap25 (ENSSGRG00000018094) bmp10 (ENSSGRG00000018093) ENSSGRG00000018092 ENSSGRG00000018091 sh2d1aa (ENSSGRG00000018089) TENM1 (ENSSGRG00000017921) ENSSGRG00000017912 ENSSGRG00000017911 smarca1 (ENSSGRG00000017281) ENSSGRG00000017278 ENSSGRG00000017277 ENSSGRG00000016730 amer1 (ENSSGRG00000016726) mtmr8 (ENSSGRG00000016590) shisa2a (ENSSGRG00000016580) #22 zc4h2 (ENSSGRG00000016572) ZC3H12B (ENSSGRG00000016571) las1l (ENSSGRG00000016570) msna (ENSSGRG00000015854) Characiphysae ANCESTRAL SPECIES 17 ENSGT00640000091497.a ENSGT01050000244950.a.a.a ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558.a.a #15 ENSGT00940000158013 #16 ENSGT00550000074787.c.a ##17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00940000161555 ENSGT01000000218454 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104.d #25 ENSGT00950000182962.a.a.d #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.mc.b #28 ENSGT00950000182922.b #30 ENSGT00940000155647.cb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000167274 #35 ENSGT00390000001504 #36 ENSGT00940000158713 #37 Characiphysae_b ANCESTRAL SPECIES 184 ENSGT00940000159803 ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b.a ENSGT00940000162717 ENSGT00940000157443 #22 ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 ENSGT01090000260082.d.a.a.d ENSGT00940000166318.b ENSGT00940000154633.jd ENSGT00940000154336 ENSGT00940000153259.a.a.a ENSGT00940000155516.u.h ENSGT00940000160157 ENSGT00940000153168.A ENSGT00950000183061.a.a.a.a.b ENSGT00940000167491 ENSGT00390000002197 Characoidei ANCESTRAL SPECIES 135 ENSGT00940000159803 ENSGT00940000160622.`b.b ENSGT00940000154103.b ENSGT00530000063529.B ENSGT00940000153902.b.a ENSGT00940000162717 ENSGT00940000157443 #22 ENSGT00390000018389 ENSGT00940000159316 ENSGT00390000014785 ENSGT01090000260082.d.a.a.d ENSGT00940000166318.b ENSGT00940000154633.jd ENSGT00940000154336 ENSGT00940000153259.a.a.a ENSGT00940000155516.u.h ENSGT00940000160157 ENSGT00940000153168.A ENSGT00950000183061.a.a.a.a.b ENSGT00940000167491 ENSGT00390000002197 ENSGT00940000165703 Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 87 dnajc25 (ENSPNAG00000006020) ythdc1 (ENSPNAG00000028365) ENSPNAG00000028385 ENSPNAG00000029678 ugt2a1 (ENSPNAG00000029699) ugt2a1 (ENSPNAG00000029704) ENSPNAG00000029719 ENSPNAG00000029791 ENSPNAG00000029826 ENSPNAG00000029873 ENSPNAG00000029919 spag7 (ENSPNAG00000029939) ENSPNAG00000029941 ENO3 (ENSPNAG00000029954) ENSPNAG00000004688 ENSPNAG00000029962 #22 WASF3 (ENSPNAG00000029967) ##26 gtf3aa (ENSPNAG00000006896) mtif3 (ENSPNAG00000029978) ENSPNAG00000029983 abhd10a (ENSPNAG00000029990) ENSPNAG00000029995 ENSPNAG00000029997 tagln3a (ENSPNAG00000030002) si:ch211-271b14.1 (ENSPNAG00000030007) zgc:175280 (ENSPNAG00000007438) eif4e1b (ENSPNAG00000000195) CASR (ENSPNAG00000000197) b4galt4 (ENSPNAG00000007444) ENSPNAG00000000198 ENSPNAG00000000199 Red-bellied piranha MODERN SPECIES 8 mix23 (ENSPNAG00000020380) fam162a (ENSPNAG00000020387) KPNA1 (ENSPNAG00000020428) ENSPNAG00000020444 drd3 (ENSPNAG00000020476) #12 qtrt2 (ENSPNAG00000020484) #13 ccdc191 (ENSPNAG00000020533) #14 zdhhc23b (ENSPNAG00000020572) #15 GRAMD1C (ENSPNAG00000020585) #16 ATP6V1A (ENSPNAG00000020631) ##17 naa50 (ENSPNAG00000020665) #18 USF3 (ENSPNAG00000020682) #19 boc (ENSPNAG00000020699) #20 ENSPNAG00000020724 spice1 (ENSPNAG00000020737) #21 SHISA2 (ENSPNAG00000020748) #22 ATP8A2 (ENSPNAG00000020918) #23 apoob (ENSPNAG00000020954) ENSPNAG00000020982 chodl (ENSPNAG00000021045) lyz (ENSPNAG00000021068) ENSPNAG00000021084 zgc:112408 (ENSPNAG00000021112) ENSPNAG00000021132 zgc:112982 (ENSPNAG00000021161) ENSPNAG00000021173 ENSPNAG00000021193 eif1axb (ENSPNAG00000021235) ENSPNAG00000021247 rps6ka3b (ENSPNAG00000021313) pdha1b (ENSPNAG00000021432) Red-bellied piranha MODERN SPECIES 633 smarca1 (ENSPNAG00000007170) ENSPNAG00000013005 ARHGEF9 (ENSPNAG00000002513) amer1 (ENSPNAG00000002515) mtmr8 (ENSPNAG00000002538) shisa2a (ENSPNAG00000002548) #22 zc4h2 (ENSPNAG00000013093) ZC3H12B (ENSPNAG00000002567) las1l (ENSPNAG00000013164) Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 18 mix23 (ENSAMXG00000038961) fam162a (ENSAMXG00000014822) KPNA1 (ENSAMXG00000014814) ENSAMXG00000036170 drd3 (ENSAMXG00000014808) #12 qtrt2 (ENSAMXG00000038440) #13 ccdc191 (ENSAMXG00000014793) #14 zdhhc23b (ENSAMXG00000038278) #15 GRAMD1C (ENSAMXG00000014778) #16 ATP6V1A (ENSAMXG00000040281) ##17 naa50 (ENSAMXG00000030749) #18 USF3 (ENSAMXG00000039711) #19 boc (ENSAMXG00000014704) #20 ENSAMXG00000014682 spice1 (ENSAMXG00000014666) #21 SHISA2 (ENSAMXG00000032367) #22 ATP8A2 (ENSAMXG00000014593) #23 rnf6 (ENSAMXG00000042264) #24 CDK8 (ENSAMXG00000014535) #25 wasf3b (ENSAMXG00000014501) #26 GPR12 (ENSAMXG00000025607) #27 usp12a (ENSAMXG00000014486) #28 rpl21 (ENSAMXG00000041892) #30 gtf3ab (ENSAMXG00000014453) lnx2a (ENSAMXG00000014426) #31 si:ch211-140b10.6 (ENSAMXG00000031681) #32 pdx1 (ENSAMXG00000031179) #33 urad (ENSAMXG00000014396) #34 ENSAMXG00000014377 #35 pan3 (ENSAMXG00000014360) #36 flt1 (ENSAMXG00000014301) #37 Mexicana tetra MODERN SPECIES 18 tpd52l1 (ENSAMXG00000017992) rnf217 (ENSAMXG00000038750) nkain2 (ENSAMXG00000032970) ENSAMXG00000034208 clvs2 (ENSAMXG00000017974) smpdl3a (ENSAMXG00000038976) fabp7b (ENSAMXG00000032251) pkib (ENSAMXG00000030623) serinc1 (ENSAMXG00000039252) hsf2 (ENSAMXG00000031974) ENSAMXG00000029445 ENSAMXG00000041848 amer1 (ENSAMXG00000035962) asb12a (ENSAMXG00000011264) mtmr8 (ENSAMXG00000042036) shisa2a (ENSAMXG00000011301) #22 zc4h2 (ENSAMXG00000043510) ZC3H12B (ENSAMXG00000011328) las1l (ENSAMXG00000011342) msna (ENSAMXG00000011348) ENSAMXG00000034252 ENSAMXG00000011359 ENSAMXG00000011380 ENSAMXG00000040888 ENSAMXG00000041491 AR (ENSAMXG00000011395) OPHN1 (ENSAMXG00000011407) yipf6 (ENSAMXG00000040444) stard8 (ENSAMXG00000011438) ENSAMXG00000011465 steep1 (ENSAMXG00000043165) Electric eel DUPLICATION Electric eel MODERN SPECIES 116 camk2n2 (ENSEEEG00000022116) chrnd (ENSEEEG00000022123) CNKSR2 (ENSEEEG00000022187) ENSEEEG00000022190 KLHL34 (ENSEEEG00000022191) smpx (ENSEEEG00000022192) ATP6V1A (ENSEEEG00000022193) ##17 naa50 (ENSEEEG00000022195) #18 USF3 (ENSEEEG00000022198) #19 boc (ENSEEEG00000022199) #20 ENSEEEG00000022200 ENSEEEG00000022201 ENSEEEG00000022202 ENSEEEG00000022204 spice1 (ENSEEEG00000022205) #21 SHISA2 (ENSEEEG00000022207) #22 ATP8A2 (ENSEEEG00000022210) #23 ENSEEEG00000022215 #24 ENSEEEG00000022216 #24 cdk8 (ENSEEEG00000022220) #25 wasf3b (ENSEEEG00000022230) #26 GPR12 (ENSEEEG00000022231) #27 usp12a (ENSEEEG00000022232) #28 rpl21 (ENSEEEG00000022309) #30 gtf3ab (ENSEEEG00000022314) lnx2a (ENSEEEG00000022326) #31 si:ch211-140b10.6 (ENSEEEG00000022327) #32 pdx1 (ENSEEEG00000022328) #33 urad (ENSEEEG00000022330) #34 Electric eel MODERN SPECIES 803 smarca1 (ENSEEEG00000006869) ENSEEEG00000006866 ARHGEF9 (ENSEEEG00000006853) amer1 (ENSEEEG00000006849) asb12a (ENSEEEG00000006848) mtmr8 (ENSEEEG00000006841) shisa2a (ENSEEEG00000006838) #22 zc4h2 (ENSEEEG00000006837) ZC3H12B (ENSEEEG00000006834) las1l (ENSEEEG00000006833) msna (ENSEEEG00000006716) Channel catfish DUPLICATION Channel catfish MODERN SPECIES 15 c1qtnf9 (ENSIPUG00000009658) ENSIPUG00000009672 ENSIPUG00000009682 ENSIPUG00000009719 ENSIPUG00000009732 flt1 (ENSIPUG00000009753) #37 pan3 (ENSIPUG00000009790) #36 flt3 (ENSIPUG00000009837) #35 atp6v1a (ENSIPUG00000009868) ##17 naa50 (ENSIPUG00000009912) #18 USF3 (ENSIPUG00000009949) #19 boc (ENSIPUG00000009964) #20 ENSIPUG00000010025 ENSIPUG00000010095 spice1 (ENSIPUG00000010107) #21 shisa2 (ENSIPUG00000010144) #22 ATP8A2 (ENSIPUG00000010193) #23 rnf6 (ENSIPUG00000010428) #24 cdk8 (ENSIPUG00000010456) #25 WASF3 (ENSIPUG00000010595) #26 gpr12 (ENSIPUG00000010616) #27 usp12 (ENSIPUG00000010631) #28 rpl21 (ENSIPUG00000010677) #30 gtf3ab (ENSIPUG00000010714) Lnx2 (ENSIPUG00000010762) #31 polr1d (ENSIPUG00000010825) #32 pdx1 (ENSIPUG00000010830) #33 urad (ENSIPUG00000010836) #34 gramd1c (ENSIPUG00000010842) #16 zdhhc23 (ENSIPUG00000010864) #15 ccdc191 (ENSIPUG00000010880) #14 Channel catfish MODERN SPECIES 20 ENSIPUG00000018057 ENSIPUG00000018048 ENSIPUG00000018039 ENSIPUG00000018036 ENSIPUG00000018029 rplp2l (ENSIPUG00000018021) fth1b (ENSIPUG00000017950) ENSIPUG00000017945 cat (ENSIPUG00000017081) ENSIPUG00000017002 Smarca1 (ENSIPUG00000016905) ENSIPUG00000016882 ARHGEF9 (ENSIPUG00000016829) amer1 (ENSIPUG00000016819) mtmr8 (ENSIPUG00000016796) shisa2a (ENSIPUG00000016787) #22 zc4h2 (ENSIPUG00000016771) zc3h12b (ENSIPUG00000016745) LAS1L (ENSIPUG00000016712) msna (ENSIPUG00000016680) ENSIPUG00000016670 stard8 (ENSIPUG00000016617) yipf6 (ENSIPUG00000016602) OPHN1 (ENSIPUG00000016491) ar (ENSIPUG00000016473) eda2r (ENSIPUG00000016451) ENSIPUG00000016440 ENSIPUG00000016426 steep1 (ENSIPUG00000016369) fdx1b (ENSIPUG00000016350) ENSIPUG00000016338 Osteoglossiformes ANCESTRAL SPECIES 67 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000165845.c.a ENSGT00940000159661 #12 ENSGT00530000063679.A #13 ENSGT00940000154110.b #14 ENSGT00940000156558 #15 ENSGT00940000158013 #16 ENSGT00550000074787.c.a ##17 ENSGT00390000009110 #18 ENSGT00390000015759 #19 ENSGT00940000158810 #20 ENSGT00940000161555 ENSGT00390000006207 #21 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a.c ##26 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182922.b #30 ENSGT00940000155647.bb ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00390000002395 #34 ENSGT00940000160575 ENSGT00390000001504.c #36 ENSGT00940000158713 #37 ENSGT00940000165120 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 16 KPNA1 (ENSSFOG00015016843) ENSSFOG00015016835 mix23 (ENSSFOG00015016820) ENSSFOG00015016803 ENSSFOG00015016785 qtrt2 (ENSSFOG00015016750) #13 ccdc191 (ENSSFOG00015016617) #14 zdhhc23b (ENSSFOG00015016585) #15 GRAMD1C (ENSSFOG00015016504) #16 ATP6V1A (ENSSFOG00015016444) ##17 naa50 (ENSSFOG00015016422) #18 USF3 (ENSSFOG00015026450) #19 boc (ENSSFOG00015016338) #20 ENSSFOG00015016258 spice1 (ENSSFOG00015016226) #21 SHISA2 (ENSSFOG00015027466) #22 ATP8A2 (ENSSFOG00015016128) #23 rnf6 (ENSSFOG00015016098) #24 cdk8 (ENSSFOG00015016005) #25 WASF3 (ENSSFOG00015015972) ##26 GPR12 (ENSSFOG00015015928) #27 rpl21 (ENSSFOG00015029845) #30 gtf3aa (ENSSFOG00015030594) lnx2a (ENSSFOG00015015882) #31 si:ch211-140b10.6 (ENSSFOG00015015872) #32 pdx1 (ENSSFOG00015026366) #33 urad (ENSSFOG00015015860) #34 pan3 (ENSSFOG00015015792) #36 flt1 (ENSSFOG00015015683) #37 ENSSFOG00015015655 TMPRSS7 (ENSSFOG00015015588) Asian bonytongue MODERN SPECIES 5 efnb1 (ENSSFOG00015007856) steep1 (ENSSFOG00015008274) ENSSFOG00015008320 stard8 (ENSSFOG00015008333) OPHN1 (ENSSFOG00015008419) AR (ENSSFOG00015008484) ENSSFOG00015008531 ENSSFOG00015008557 ENSSFOG00015025943 ENSSFOG00015008601 fdx1b (ENSSFOG00015025806) msna (ENSSFOG00015008662) las1l (ENSSFOG00015008737) ZC3H12B (ENSSFOG00015008769) ZC4H2 (ENSSFOG00015008792) shisa2a (ENSSFOG00015008823) #22 mtmr8 (ENSSFOG00015008844) asb12a (ENSSFOG00015008890) amer1 (ENSSFOG00015008892) ARHGEF9 (ENSSFOG00015027567) ENSSFOG00015029964 smarca1 (ENSSFOG00015009043) TENM1 (ENSSFOG00015009122) SH2D1A (ENSSFOG00015009183) agtr2 (ENSSFOG00015009207) apool (ENSSFOG00015029030) ENSSFOG00015009216 rps6kal (ENSSFOG00015009328) POU3F4 (ENSSFOG00015024608) BRWD3 (ENSSFOG00015009384) ENSSFOG00015030281 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 412 smpx (ENSPKIG00000012545) mbtps2 (ENSPKIG00000012564) sms (ENSPKIG00000012603) phex (ENSPKIG00000012686) USF3 (ENSPKIG00000012814) #19 naa50 (ENSPKIG00000012869) #18 ATP6V1A (ENSPKIG00000012921) ##17 GRAMD1C (ENSPKIG00000012972) #16 zdhhc23b (ENSPKIG00000013009) #15 ccdc191 (ENSPKIG00000013036) #14 qtrt2 (ENSPKIG00000013085) #13 drd3 (ENSPKIG00000013157) #12 boc (ENSPKIG00000013202) #20 ENSPKIG00000013259 spice1 (ENSPKIG00000013323) #21 SHISA2 (ENSPKIG00000013355) #22 ATP8A2 (ENSPKIG00000013384) #23 rnf6 (ENSPKIG00000013440) #24 cdk8 (ENSPKIG00000013481) #25 WASF3 (ENSPKIG00000013525) ##26 GPR12 (ENSPKIG00000013557) #27 rpl21 (ENSPKIG00000013573) #30 P. kingsleyae MODERN SPECIES 29 adrm1 (ENSPKIG00000012305) osbpl2b (ENSPKIG00000012359) SOGA1 (ENSPKIG00000012464) steep1 (ENSPKIG00000012535) stard8 (ENSPKIG00000012587) OPHN1 (ENSPKIG00000012681) AR (ENSPKIG00000012722) ENSPKIG00000012738 EDA2R (ENSPKIG00000012764) ENSPKIG00000012786 fdx1b (ENSPKIG00000012815) msna (ENSPKIG00000012849) las1l (ENSPKIG00000012906) ZC3H12B (ENSPKIG00000012946) ZC4H2 (ENSPKIG00000012983) shisa2a (ENSPKIG00000013013) #22 mtmr8 (ENSPKIG00000013052) asb12a (ENSPKIG00000013105) amer1 (ENSPKIG00000013117) ENSPKIG00000013176 FUT7 (ENSPKIG00000013273) ENSPKIG00000013301 smarca1 (ENSPKIG00000013411) TENM1 (ENSPKIG00000013656) ENSPKIG00000013868 RPS6KA6 (ENSPKIG00000014054) POU3F4 (ENSPKIG00000014144) BRWD3 (ENSPKIG00000014173) ENSPKIG00000014242 chmp1b (ENSPKIG00000014262) ENSPKIG00000014290 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 669 mbtps2 (ENSLOCG00000003747) sms (ENSLOCG00000003761) phex (ENSLOCG00000003780) PTCHD1 (ENSLOCG00000003811) ENSLOCG00000003837 ENSLOCG00000003856 gabrr3a (ENSLOCG00000003872) hhla2a.1 (ENSLOCG00000003888) ENSLOCG00000003906 cip2a (ENSLOCG00000003944) si:ch73-264p11.1 (ENSLOCG00000003966) PLCXD2 (ENSLOCG00000003981) PHLDB2 (ENSLOCG00000003992) mtmr6 (ENSLOCG00000004016) nup58 (ENSLOCG00000004040) SHISA2 (ENSLOCG00000004070) #22 ATP8A2 (ENSLOCG00000004080) #23 cdk8 (ENSLOCG00000004124) #25 wasf3b (ENSLOCG00000004135) #26 GPR12 (ENSLOCG00000018189) #27 usp12a (ENSLOCG00000004146) #28 rpl21 (ENSLOCG00000004171) #30 RASL11A (ENSLOCG00000004176) MTIF3 (ENSLOCG00000004205) gtf3ab (ENSLOCG00000004190) lnx2a (ENSLOCG00000004220) #31 si:ch211-140b10.6 (ENSLOCG00000004237) #32 gsx1 (ENSLOCG00000004253) pdx1 (ENSLOCG00000004260) #33 CDX2 (ENSLOCG00000004278) urad (ENSLOCG00000004296) #34 Spotted gar MODERN SPECIES 673 yipf6 (ENSLOCG00000014686) AR (ENSLOCG00000014680) OPHN1 (ENSLOCG00000014675) ENSLOCG00000014669 ENSLOCG00000014665 HEPH (ENSLOCG00000014659) ENSLOCG00000014654 ENSLOCG00000014649 fdx1b (ENSLOCG00000014648) msna (ENSLOCG00000014640) las1l (ENSLOCG00000014635) ZC3H12B (ENSLOCG00000014631) zc4h2 (ENSLOCG00000014627) ENSLOCG00000014623 ENSLOCG00000014620 shisa2a (ENSLOCG00000014619) #22 mtmr8 (ENSLOCG00000014615) asb12a (ENSLOCG00000014613) amer1 (ENSLOCG00000014609) arhgef9b (ENSLOCG00000014608) GAB3 (ENSLOCG00000014605) smarca1 (ENSLOCG00000014591) TENM1 (ENSLOCG00000014581) SH2D1A (ENSLOCG00000014578) stag2a (ENSLOCG00000014565) xiap (ENSLOCG00000014562) thoc2 (ENSLOCG00000014546) gria3b (ENSLOCG00000014528) psmd10 (ENSLOCG00000014526) nxt2 (ENSLOCG00000014519) acsl4a (ENSLOCG00000014514) Reedfish DUPLICATION Reedfish MODERN SPECIES 12 micu2 (ENSECRG00000008542) ENSECRG00000008528 FGF9 (ENSECRG00000008520) ENSECRG00000008509 sgcg (ENSECRG00000008496) SACS (ENSECRG00000008481) tnfrsf19 (ENSECRG00000008464) MIPEP (ENSECRG00000008439) ENSECRG00000008382 ENSECRG00000008349 c1qtnf9 (ENSECRG00000008295) SPATA13 (ENSECRG00000008265) amer2 (ENSECRG00000008245) mtmr6 (ENSECRG00000008220) nup58 (ENSECRG00000008203) SHISA2 (ENSECRG00000008190) #22 ATP8A2 (ENSECRG00000008156) #23 ENSECRG00000008132 #23 rnf6 (ENSECRG00000008127) #24 ENSECRG00000008118 cdk8 (ENSECRG00000008109) #25 wasf3b (ENSECRG00000008096) #26 GPR12 (ENSECRG00000008087) #27 usp12a (ENSECRG00000008004) #28 rpl21 (ENSECRG00000007956) #30 RASL11A (ENSECRG00000007941) gtf3ab (ENSECRG00000007924) MTIF3 (ENSECRG00000007889) lnx2a (ENSECRG00000007858) #31 si:ch211-140b10.6 (ENSECRG00000007844) #32 ENSECRG00000007834 Reedfish MODERN SPECIES 3 OPHN1 (ENSECRG00000009531) AR (ENSECRG00000009512) EDA2R (ENSECRG00000009484) ENSECRG00000009461 HEPH (ENSECRG00000009431) ENSECRG00000011431 ENSECRG00000011283 ENSECRG00000011221 fdx1b (ENSECRG00000011085) msna (ENSECRG00000011072) ENSECRG00000011061 ZC3H12B (ENSECRG00000011055) zc4h2 (ENSECRG00000011049) ENSECRG00000011040 ENSECRG00000011029 shisa2a (ENSECRG00000011018) #22 mtmr8 (ENSECRG00000011008) ASB12 (ENSECRG00000010997) ASB12 (ENSECRG00000010992) amer1 (ENSECRG00000010988) arhgef9b (ENSECRG00000010963) ENSECRG00000010933 smarca1 (ENSECRG00000010923) TENM1 (ENSECRG00000010870) SH2D1A (ENSECRG00000010838) stag2a (ENSECRG00000010820) xiap (ENSECRG00000010799) thoc2 (ENSECRG00000010772) gria3b (ENSECRG00000010739) igbp1 (ENSECRG00000010705) gjb1a (ENSECRG00000010699) Sarcopterygii ANCESTRAL SPECIES 36 ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.pb.a ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00940000165850 ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000153902.b ENSGT00940000162717 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00940000164592 ENSGT00940000164372 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00940000170353 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 290 SACS (ENSLACG00000003831) MIPEP (ENSLACG00000011026) ENSLACG00000013187 c1qtnf9 (ENSLACG00000013402) SPATA13 (ENSLACG00000013765) ENSLACG00000014197 AMER2 (ENSLACG00000015698) mtmr6 (ENSLACG00000015835) NUP58 (ENSLACG00000015994) SHISA2 (ENSLACG00000016261) #22 ATP8A2 (ENSLACG00000017524) #23 RNF6 (ENSLACG00000017836) #24 CDK8 (ENSLACG00000018134) #25 Coelacanth MODERN SPECIES 656 ACSL4 (ENSLACG00000002977) NXT2 (ENSLACG00000004286) GUCY2F (ENSLACG00000004776) IRS4 (ENSLACG00000006985) col4a5 (ENSLACG00000007854) COL4A6 (ENSLACG00000010637) ATG4A (ENSLACG00000012655) PSMD10 (ENSLACG00000012845) VSIG1 (ENSLACG00000012909) shisa2a (ENSLACG00000013114) #22 ENSLACG00000013319 ZC4H2 (ENSLACG00000014242) ZC3H12B (ENSLACG00000014526) ENSLACG00000014737 msna (ENSLACG00000015168) ENSLACG00000015341 ENSLACG00000015397 Tetrapoda ANCESTRAL SPECIES ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.pb.a ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00940000165850 ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00940000164592 ENSGT00940000164372 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 Anura ANCESTRAL SPECIES 27 ENSGT00940000159161 ENSGT00390000003152 ENSGT00500000045005 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.pb.a ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00390000014424 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261 ENSGT00390000002395 #34 ENSGT00940000160575 ENSGT00390000001504 #36 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000003045 EBPL (ENSLLEG00000003054) KPNA3 (ENSLLEG00000003109) SPRYD7 (ENSLLEG00000003208) ARL11 (ENSLLEG00000003227) ENSLLEG00000003241 FNDC3A (ENSLLEG00000003310) ENSLLEG00000003581 ENSLLEG00000003585 CDADC1 (ENSLLEG00000003600) ENSLLEG00000003617 CAB39L (ENSLLEG00000003627) SETDB2 (ENSLLEG00000003660) ENSLLEG00000003754 NUP58 (ENSLLEG00000003896) SHISA2 (ENSLLEG00000013968) #22 ATP8A2 (ENSLLEG00000014136) #23 ENSLLEG00000014656 CDK8 (ENSLLEG00000014701) #25 ENSLLEG00000015281 WASF3 (ENSLLEG00000015310) #26 ENSLLEG00000015395 ENSLLEG00000015420 #27 ENSLLEG00000015458 USP12 (ENSLLEG00000015515) #28 MTIF3 (ENSLLEG00000016013) ENSLLEG00000016061 #30 RASL11A (ENSLLEG00000016136) GTF3A (ENSLLEG00000016196) ENSLLEG00000016300 LNX2 (ENSLLEG00000016331) #31 Leishan spiny toad MODERN SPECIES 12 ENSLLEG00000013300 ##27 ENSLLEG00000013343 #28 ENSLLEG00000013595 ENSLLEG00000013653 ENSLLEG00000013788 CHIC1 (ENSLLEG00000013872) ENSLLEG00000013939 ENSLLEG00000013955 ENSLLEG00000014006 ENSLLEG00000014247 ENSLLEG00000014760 ARHGEF9 (ENSLLEG00000014842) AMER1 (ENSLLEG00000015823) ENSLLEG00000015859 MTMR8 (ENSLLEG00000015887) ENSLLEG00000016128 #22 ENSLLEG00000016148 ENSLLEG00000016202 ZC4H2 (ENSLLEG00000016245) ENSLLEG00000016530 ENSLLEG00000016609 ENSLLEG00000016685 ENSLLEG00000016703 ENSLLEG00000016734 CUL4B (ENSLLEG00000017007) LAMP2 (ENSLLEG00000018114) ATP1B4 (ENSLLEG00000018305) ENSLLEG00000018445 TMEM255A (ENSLLEG00000018878) ZBTB33 (ENSLLEG00000019244) ENSLLEG00000019275 Frog DUPLICATION Frog MODERN SPECIES 2 ENSXETG00000044926 tnfrsf19 (ENSXETG00000009704) mipep (ENSXETG00000009705) ENSXETG00000047395 ENSXETG00000036850 ENSXETG00000046495 spata13 (ENSXETG00000009707) c1qtnf9b (ENSXETG00000009708) ENSXETG00000045939 ENSXETG00000038895 ENSXETG00000046074 amer2 (ENSXETG00000033579) mtmr6 (ENSXETG00000010682) nup58 (ENSXETG00000010681) ENSXETG00000044982 shisa2 (ENSXETG00000040077) #22 atp8a2 (ENSXETG00000010674) #23 cdk8 (ENSXETG00000009787) #25 wasf3 (ENSXETG00000032158) #26 gpr185a (ENSXETG00000042585) #27 usp12 (ENSXETG00000009799) #28 mtif3 (ENSXETG00000031401) rpl21 (ENSXETG00000009802) #30 rasl11a (ENSXETG00000030983) ENSXETG00000041520 gtf3a (ENSXETG00000032930) lnx2 (ENSXETG00000031406) #31 polr1d.1 (ENSXETG00000025998) #32 gsx1 (ENSXETG00000035623) pdx1 (ENSXETG00000011787) #33 cdx2 (ENSXETG00000040504) Frog DUPLICATION Frog MODERN SPECIES 8 satpa (ENSXETG00000004489) ENSXETG00000043989 acod1la (ENSXETG00000034631) ENSXETG00000031140 zbtb33 (ENSXETG00000049420) tmem255a (ENSXETG00000004476) atp1b4 (ENSXETG00000004477) cul4b (ENSXETG00000004474) mcts1 (ENSXETG00000004472) c1galt1c1 (ENSXETG00000036572) las1l (ENSXETG00000030019) zc3h12b (ENSXETG00000035396) zc4h2 (ENSXETG00000017793) ENSXETG00000043534 c8orf48 (ENSXETG00000037238) ENSXETG00000040922 #22 ENSXETG00000046111 #22 mtmr8 (ENSXETG00000025610) asb12.2 (ENSXETG00000047059) asb12 (ENSXETG00000041637) amer1 (ENSXETG00000040917) arhgef9 (ENSXETG00000034320) kdrl (ENSXETG00000037279) cdx4 (ENSXETG00000004589) chic1 (ENSXETG00000035569) ENSXETG00000040575 XB5786944 [provisional:lnx2] (ENSXETG00000034300) ENSXETG00000046688 ENSXETG00000039387 usp12b (ENSXETG00000004585) #28 gpr12 (ENSXETG00000042433) ##27 Frog MODERN SPECIES 8 ENSXETG00000049279 gpr12 (ENSXETG00000042433) ##27 usp12b (ENSXETG00000004585) #28 ENSXETG00000039387 ENSXETG00000046688 XB5786944 [provisional:lnx2] (ENSXETG00000034300) ENSXETG00000040575 chic1 (ENSXETG00000035569) cdx4 (ENSXETG00000004589) kdrl (ENSXETG00000037279) arhgef9 (ENSXETG00000034320) amer1 (ENSXETG00000040917) asb12 (ENSXETG00000041637) asb12.2 (ENSXETG00000047059) mtmr8 (ENSXETG00000025610) ENSXETG00000046111 #22 ENSXETG00000040922 #22 c8orf48 (ENSXETG00000037238) ENSXETG00000043534 zc4h2 (ENSXETG00000017793) zc3h12b (ENSXETG00000035396) las1l (ENSXETG00000030019) c1galt1c1 (ENSXETG00000036572) mcts1 (ENSXETG00000004472) cul4b (ENSXETG00000004474) atp1b4 (ENSXETG00000004477) tmem255a (ENSXETG00000004476) zbtb33 (ENSXETG00000049420) ENSXETG00000031140 acod1la (ENSXETG00000034631) ENSXETG00000043989 Amniota ANCESTRAL SPECIES ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00940000164592 ENSGT00940000164372 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 Sauria ANCESTRAL SPECIES 2 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 Lepidosauria ANCESTRAL SPECIES 17 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000163955 #33 Episquamata ANCESTRAL SPECIES 2 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261 ENSGT00940000160575 Toxicofera ANCESTRAL SPECIES 9 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261.b ENSGT00940000161261.a Elapidae ANCESTRAL SPECIES 10 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261.b ENSGT00940000161261.a Indian cobra MODERN SPECIES 4 LATS2 (ENSNNAG00000004721) SAP18 (ENSNNAG00000004690) MRPL57 (ENSNNAG00000004674) ZDHHC20 (ENSNNAG00000004427) MICU2 (ENSNNAG00000004367) FGF9 (ENSNNAG00000004347) SGCG (ENSNNAG00000004301) SACS (ENSNNAG00000003991) TNFRSF19 (ENSNNAG00000003878) MIPEP (ENSNNAG00000003686) ENSNNAG00000003533 SPATA13 (ENSNNAG00000003503) AMER2 (ENSNNAG00000003492) MTMR6 (ENSNNAG00000003469) NUP58 (ENSNNAG00000003403) SHISA2 (ENSNNAG00000003374) #22 ATP8A2 (ENSNNAG00000003171) #23 RNF6 (ENSNNAG00000018464) #24 CDK8 (ENSNNAG00000018452) #25 WASF3 (ENSNNAG00000018442) #26 GPR12 (ENSNNAG00000018437) #27 USP12 (ENSNNAG00000018426) #28 RPL21 (ENSNNAG00000018417) #30 RASL11A (ENSNNAG00000018412) GTF3A (ENSNNAG00000018407) ENSNNAG00000018403 LNX2 (ENSNNAG00000018400) #31 ENSNNAG00000018396 #32 ENSNNAG00000018395 ENSNNAG00000018390 ENSNNAG00000018388 Elapidae_a ANCESTRAL SPECIES 12 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261.b ENSGT00940000161261.a ENSGT00940000160575 Acanthophiinae ANCESTRAL SPECIES 14 ENSGT00940000159161 ENSGT00390000003152 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261.b ENSGT00940000161261.a ENSGT00940000160575 Mainland tiger snake MODERN SPECIES 68 EEF1AKMT1 (ENSNSUG00000013456) XPO4 (ENSNSUG00000013454) LATS2 (ENSNSUG00000013452) SAP18 (ENSNSUG00000013447) ZDHHC20 (ENSNSUG00000013446) MICU2 (ENSNSUG00000013445) FGF9 (ENSNSUG00000013444) SGCG (ENSNSUG00000013442) SACS (ENSNSUG00000013399) TNFRSF19 (ENSNSUG00000013398) MIPEP (ENSNSUG00000013397) ENSNSUG00000013396 SPATA13 (ENSNSUG00000013395) MTMR6 (ENSNSUG00000013393) NUP58 (ENSNSUG00000013392) SHISA2 (ENSNSUG00000013391) #22 ATP8A2 (ENSNSUG00000013390) #23 RNF6 (ENSNSUG00000013389) #24 CDK8 (ENSNSUG00000013378) #25 WASF3 (ENSNSUG00000013377) #26 GPR12 (ENSNSUG00000013376) #27 USP12 (ENSNSUG00000013375) #28 RPL21 (ENSNSUG00000013372) #30 MTIF3 (ENSNSUG00000013371) GTF3A (ENSNSUG00000013369) LNX2 (ENSNSUG00000013336) #31 ENSNSUG00000013331 ENSNSUG00000013330 #33 CDX2 (ENSNSUG00000013289) FLT3 (ENSNSUG00000013286) PAN3 (ENSNSUG00000012955) #36 Eastern brown snake MODERN SPECIES 41 LATS2 (ENSPTXG00000005260) SAP18 (ENSPTXG00000005261) MRPL57 (ENSPTXG00000005263) ZDHHC20 (ENSPTXG00000005265) MICU2 (ENSPTXG00000005268) FGF9 (ENSPTXG00000005270) SGCG (ENSPTXG00000005271) SACS (ENSPTXG00000005275) TNFRSF19 (ENSPTXG00000005300) MIPEP (ENSPTXG00000005302) ENSPTXG00000005305 SPATA13 (ENSPTXG00000005308) AMER2 (ENSPTXG00000005315) MTMR6 (ENSPTXG00000005316) NUP58 (ENSPTXG00000005317) SHISA2 (ENSPTXG00000005318) #22 ATP8A2 (ENSPTXG00000005319) #23 RNF6 (ENSPTXG00000005321) #24 CDK8 (ENSPTXG00000005324) #25 WASF3 (ENSPTXG00000005326) #26 GPR12 (ENSPTXG00000005329) #27 USP12 (ENSPTXG00000005330) #28 RPL21 (ENSPTXG00000005331) #30 GTF3A (ENSPTXG00000005334) MTIF3 (ENSPTXG00000005335) LNX2 (ENSPTXG00000005336) #31 ENSPTXG00000005337 #32 ENSPTXG00000005338 ENSPTXG00000005339 #33 ENSPTXG00000005340 FLT3 (ENSPTXG00000005341) Blue-lipped sea krait MODERN SPECIES 1029 AMER2 (ENSLLTG00000004792) MTMR6 (ENSLLTG00000004810) NUP58 (ENSLLTG00000004827) SHISA2 (ENSLLTG00000004845) #22 Lizard MODERN SPECIES 920 ENSACAG00000002107 ENSACAG00000002295 ENSACAG00000035352 ENSACAG00000043321 #22 ENSACAG00000002566 #23 ENSACAG00000037152 #23 RNF6 (ENSACAG00000002971) #24 ENSACAG00000003031 #25 WASF3 (ENSACAG00000003083) #26 ENSACAG00000045351 ENSACAG00000003127 #27 ENSACAG00000043765 USP12 (ENSACAG00000003130) #28 RPL21 (ENSACAG00000003169) #30 RASL11A (ENSACAG00000045270) GTF3A (ENSACAG00000003216) MTIF3 (ENSACAG00000003250) LNX2 (ENSACAG00000003256) #31 ENSACAG00000037102 Laterata ANCESTRAL SPECIES 3 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000163955 #33 ENSGT00940000161261 ENSGT00940000160575 Common wall lizard MODERN SPECIES 12 MRPL57 (ENSPMRG00000003459) ENSPMRG00000003465 ZDHHC20 (ENSPMRG00000003469) MICU2 (ENSPMRG00000003485) FGF9 (ENSPMRG00000003495) SGCG (ENSPMRG00000003500) SACS (ENSPMRG00000003508) TNFRSF19 (ENSPMRG00000003522) ENSPMRG00000003597 ENSPMRG00000003724 ENSPMRG00000003726 SPATA13 (ENSPMRG00000003736) MTMR6 (ENSPMRG00000003778) NUP58 (ENSPMRG00000003799) ENSPMRG00000003825 SHISA2 (ENSPMRG00000003826) #22 ATP8A2 (ENSPMRG00000003832) #23 RNF6 (ENSPMRG00000003878) #24 CDK8 (ENSPMRG00000003886) #25 WASF3 (ENSPMRG00000003897) #26 GPR12 (ENSPMRG00000003909) #27 USP12 (ENSPMRG00000003915) #28 ENSPMRG00000003922 #30 RASL11A (ENSPMRG00000003932) GTF3A (ENSPMRG00000003933) MTIF3 (ENSPMRG00000003936) LNX2 (ENSPMRG00000003941) #31 ENSPMRG00000003947 ENSPMRG00000003950 #32 ENSPMRG00000003955 ENSPMRG00000003962 #33 Argentine black and white tegu MODERN SPECIES SAP18 (ENSSMRG00000014802) SKA3 (ENSSMRG00000014801) MRPL57 (ENSSMRG00000014800) ZDHHC20 (ENSSMRG00000014797) MICU2 (ENSSMRG00000014795) FGF9 (ENSSMRG00000014791) SGCG (ENSSMRG00000014789) SACS (ENSSMRG00000014788) TNFRSF19 (ENSSMRG00000014787) MIPEP (ENSSMRG00000014786) ENSSMRG00000014785 SPATA13 (ENSSMRG00000014783) AMER2 (ENSSMRG00000014782) MTMR6 (ENSSMRG00000014780) NUP58 (ENSSMRG00000014779) SHISA2 (ENSSMRG00000014778) #22 ATP8A2 (ENSSMRG00000013134) #23 CDK8 (ENSSMRG00000013133) #25 WASF3 (ENSSMRG00000013132) #26 USP12 (ENSSMRG00000013130) #28 RASL11A (ENSSMRG00000013127) GTF3A (ENSSMRG00000013126) MTIF3 (ENSSMRG00000013125) LNX2 (ENSSMRG00000013124) #31 ENSSMRG00000013122 #32 ENSSMRG00000013121 ENSSMRG00000013120 #33 CDX2 (ENSSMRG00000013119) FLT3 (ENSSMRG00000013118) PAN3 (ENSSMRG00000013117) #36 FLT1 (ENSSMRG00000013116) #37 Archelosauria ANCESTRAL SPECIES ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 Cryptodira ANCESTRAL SPECIES ENSGT00940000159161 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Chinese turtle MODERN SPECIES 2233 SKA3 (ENSPSIG00000007022) MRPL57 (ENSPSIG00000001788) ENSPSIG00000001789 ZDHHC20 (ENSPSIG00000007412) MICU2 (ENSPSIG00000008004) ENSPSIG00000008017 FGF9 (ENSPSIG00000008031) SGCG (ENSPSIG00000008037) SACS (ENSPSIG00000008143) TNFRSF19 (ENSPSIG00000008205) MIPEP (ENSPSIG00000008504) SPATA13 (ENSPSIG00000008854) AMER2 (ENSPSIG00000009115) MTMR6 (ENSPSIG00000009130) NUP58 (ENSPSIG00000009134) SHISA2 (ENSPSIG00000009323) #22 ENSPSIG00000009334 ATP8A2 (ENSPSIG00000009377) #23 RNF6 (ENSPSIG00000010388) #24 CDK8 (ENSPSIG00000010808) #25 WASF3 (ENSPSIG00000010814) #26 GPR12 (ENSPSIG00000001794) #27 ENSPSIG00000010914 USP12 (ENSPSIG00000010921) #28 RPL21 (ENSPSIG00000011259) #30 RASL11A (ENSPSIG00000011613) GTF3A (ENSPSIG00000011722) MTIF3 (ENSPSIG00000011725) LNX2 (ENSPSIG00000011733) #31 ENSPSIG00000011964 #32 ENSPSIG00000012283 #33 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187.a ENSGT00940000159187.b ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111.c ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.ob.b #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Emydidae ANCESTRAL SPECIES 19 ENSGT00940000159161 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187.a ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055.a ENSGT00730000111111.c ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.ob.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 painted turtle DUPLICATION painted turtle MODERN SPECIES ENSCPBG00000020657 ENSCPBG00000020652 RACK1 (ENSCPBG00000020646) ENSCPBG00000020640 ENSCPBG00000020637 ENSCPBG00000020632 ENSCPBG00000020630 ENSCPBG00000020628 ENSCPBG00000020625 ENSCPBG00000020622 ENSCPBG00000020603 ENSCPBG00000020565 AMER2 (ENSCPBG00000020548) MTMR6 (ENSCPBG00000020546) NUP58 (ENSCPBG00000020541) SHISA2 (ENSCPBG00000020540) #22 ATP8A2 (ENSCPBG00000020518) #23 RNF6 (ENSCPBG00000020502) #24 ENSCPBG00000020495 #25 WASF3 (ENSCPBG00000020488) #26 GPR12 (ENSCPBG00000020487) #27 USP12 (ENSCPBG00000020485) #28 ENSCPBG00000020481 #30 RASL11A (ENSCPBG00000020480) GTF3A (ENSCPBG00000020478) MTIF3 (ENSCPBG00000020476) LNX2 (ENSCPBG00000020474) #31 ENSCPBG00000020470 #32 GSX1 (ENSCPBG00000020469) ENSCPBG00000020468 #33 CDX2 (ENSCPBG00000020467) painted turtle MODERN SPECIES 822 ENSCPBG00000006736 ENSCPBG00000006755 ENSCPBG00000006768 ENSCPBG00000006774 ENSCPBG00000006776 ENSCPBG00000006785 ENSCPBG00000006860 ENSCPBG00000006867 HPN (ENSCPBG00000006881) ENSCPBG00000006904 ENSCPBG00000006910 ENSCPBG00000006917 ENSCPBG00000006922 SCN1B (ENSCPBG00000006928) GRAMD1A (ENSCPBG00000006943) ENSCPBG00000006962 #22 ENSCPBG00000006968 ENSCPBG00000006975 ZC4H2 (ENSCPBG00000006980) ZC3H12B (ENSCPBG00000006983) LAS1L (ENSCPBG00000006993) ENSCPBG00000007011 ENSCPBG00000007016 ENSCPBG00000007027 ENSCPBG00000007043 ENSCPBG00000007054 ENSCPBG00000007078 ENSCPBG00000007083 ENSCPBG00000007089 HEPH (ENSCPBG00000007136) ENSCPBG00000007208 Three-toed box turtle DUPLICATION Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 66 ENSTMTG00000013959 ENSTMTG00000013984 ENSTMTG00000014036 ENSTMTG00000014050 ENSTMTG00000014094 ENSTMTG00000014112 ENSTMTG00000014125 ENSTMTG00000014163 ENSTMTG00000014351 ENSTMTG00000014365 ENSTMTG00000014474 ENSTMTG00000014547 ENSTMTG00000014563 ENSTMTG00000014583 ENSTMTG00000014618 ENSTMTG00000014650 #22 ENSTMTG00000014679 #23 ENSTMTG00000014793 #24 ENSTMTG00000014812 #25 ENSTMTG00000014850 #26 ENSTMTG00000014868 #27 ENSTMTG00000014879 #28 ENSTMTG00000014924 #30 ENSTMTG00000014944 ENSTMTG00000014959 ENSTMTG00000014974 ENSTMTG00000014981 #31 ENSTMTG00000014992 #32 ENSTMTG00000014999 ENSTMTG00000015011 #33 ENSTMTG00000015025 Three-toed box turtle MODERN SPECIES 67 ENSTMTG00000003034 ENSTMTG00000003051 ENSTMTG00000003102 ENSTMTG00000003108 ENSTMTG00000003136 ENSTMTG00000003164 ENSTMTG00000003180 ENSTMTG00000003211 ENSTMTG00000003383 ENSTMTG00000003544 ENSTMTG00000004396 ENSTMTG00000004443 ENSTMTG00000004513 ENSTMTG00000004719 ENSTMTG00000004798 #22 ENSTMTG00000004825 #23 ENSTMTG00000004982 #24 ENSTMTG00000005003 #25 ENSTMTG00000005088 #26 ENSTMTG00000005108 #27 ENSTMTG00000005117 #28 ENSTMTG00000005134 #30 ENSTMTG00000005157 ENSTMTG00000005188 ENSTMTG00000005240 ENSTMTG00000005258 #31 ENSTMTG00000005273 #32 ENSTMTG00000005288 ENSTMTG00000005297 #33 ENSTMTG00000005305 Three-toed box turtle MODERN SPECIES 61 SLC16A2 (ENSTMTG00000019881) ENSTMTG00000019890 ##26 ENSTMTG00000019901 ##27 ENSTMTG00000019908 #28 ENSTMTG00000019919 ENSTMTG00000019926 ENSTMTG00000019930 CHIC1 (ENSTMTG00000019938) CDX4 (ENSTMTG00000019941) ENSTMTG00000019950 ENSTMTG00000019966 ARHGEF9 (ENSTMTG00000019994) AMER1 (ENSTMTG00000020212) ASB12 (ENSTMTG00000020238) MTMR8 (ENSTMTG00000020255) ENSTMTG00000020433 #22 ZC4H2 (ENSTMTG00000020441) ZC3H12B (ENSTMTG00000020445) LAS1L (ENSTMTG00000020454) ENSTMTG00000020460 ENSTMTG00000020464 ENSTMTG00000020475 ENSTMTG00000020480 ENSTMTG00000020486 ENSTMTG00000020495 HEPH (ENSTMTG00000000444) ENSTMTG00000000843 ENSTMTG00000000893 EDA2R (ENSTMTG00000000946) AR (ENSTMTG00000000983) OPHN1 (ENSTMTG00000001039) Testudinidae ANCESTRAL SPECIES ENSGT00940000159161 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187.b ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111.c ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000178537 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a.ob.b #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00960000191986 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 841 ENSCABG00000021310 NXNL1 (ENSCABG00000021311) GMIP (ENSCABG00000021313) LPAR2 (ENSCABG00000021314) PBX4 (ENSCABG00000021317) DSN1 (ENSCABG00000021320) MVB12A (ENSCABG00000021322) ATP13A1 (ENSCABG00000021336) ENSCABG00000021345 ENSCABG00000021346 ENSCABG00000021347 FBXL12 (ENSCABG00000021348) UBL5 (ENSCABG00000021349) PIN1 (ENSCABG00000021350) ENSCABG00000021351 SHISA2 (ENSCABG00000021352) #22 ENSCABG00000021353 #23 ENSCABG00000021355 #23 Abingdon island giant tortoise MODERN SPECIES 1482 ASB12 (ENSCABG00000008685) MTMR8 (ENSCABG00000008652) ENSCABG00000008649 #22 C8orf48 (ENSCABG00000008645) Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES ENSGEVG00005000148 SKA3 (ENSGEVG00005000169) MRPL57 (ENSGEVG00005000278) ZDHHC20 (ENSGEVG00005000303) MICU2 (ENSGEVG00005000335) FGF9 (ENSGEVG00005000369) ENSGEVG00005000384 SGCG (ENSGEVG00005000401) SACS (ENSGEVG00005000456) TNFRSF19 (ENSGEVG00005000532) MIPEP (ENSGEVG00005000561) SPATA13 (ENSGEVG00005000620) AMER2 (ENSGEVG00005000662) MTMR6 (ENSGEVG00005000689) NUP58 (ENSGEVG00005000710) SHISA2 (ENSGEVG00005000720) #22 ATP8A2 (ENSGEVG00005000792) #23 ENSGEVG00005000826 ENSGEVG00005000842 RNF6 (ENSGEVG00005000853) #24 CDK8 (ENSGEVG00005000884) #25 WASF3 (ENSGEVG00005000927) #26 GPR12 (ENSGEVG00005000941) #27 USP12 (ENSGEVG00005000973) #28 RPL21 (ENSGEVG00005001010) #30 RASL11A (ENSGEVG00005001037) ENSGEVG00005001047 GTF3A (ENSGEVG00005001061) MTIF3 (ENSGEVG00005001075) LNX2 (ENSGEVG00005001093) #31 ENSGEVG00005001122 #32 Goode s thornscrub tortoise MODERN SPECIES 23 SLC16A2 (ENSGEVG00005013467) ENSGEVG00005013373 ##26 ENSGEVG00005013328 ##27 ENSGEVG00005013266 #28 ENSGEVG00005013245 ENSGEVG00005013218 ENSGEVG00005013178 CHIC1 (ENSGEVG00005013149) CDX4 (ENSGEVG00005013113) ENSGEVG00005013026 ENSGEVG00005012967 ARHGEF9 (ENSGEVG00005012564) AMER1 (ENSGEVG00005012446) ASB12 (ENSGEVG00005012432) MTMR8 (ENSGEVG00005012378) ENSGEVG00005012327 #22 C8orf48 (ENSGEVG00005012298) ZC4H2 (ENSGEVG00005012271) ZC3H12B (ENSGEVG00005012207) LAS1L (ENSGEVG00005012148) ENSGEVG00005012119 ENSGEVG00005011941 ENSGEVG00005011860 ENSGEVG00005011813 ENSGEVG00005011773 HEPH (ENSGEVG00005010948) ENSGEVG00005010783 ENSGEVG00005010747 EDA2R (ENSGEVG00005010722) AR (ENSGEVG00005010515) OPHN1 (ENSGEVG00005010394) Archosauria ANCESTRAL SPECIES 2 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 27 MRPL57 (ENSCPRG00005013062) ZDHHC20 (ENSCPRG00005013038) MICU2 (ENSCPRG00005013017) FGF9 (ENSCPRG00005013011) ENSCPRG00005013002 SGCG (ENSCPRG00005012982) SACS (ENSCPRG00005012958) TNFRSF19 (ENSCPRG00005012946) MIPEP (ENSCPRG00005012906) ENSCPRG00005012900 ENSCPRG00005012893 SPATA13 (ENSCPRG00005012866) MTMR6 (ENSCPRG00005012829) ENSCPRG00005012801 NUP58 (ENSCPRG00005012794) SHISA2 (ENSCPRG00005012789) #22 ENSCPRG00005012753 #23 ENSCPRG00005012709 #23 RNF6 (ENSCPRG00005012704) #24 CDK8 (ENSCPRG00005012631) #25 WASF3 (ENSCPRG00005012622) #26 GPR12 (ENSCPRG00005012587) #27 USP12 (ENSCPRG00005012451) #28 RPL21 (ENSCPRG00005012404) #30 RASL11A (ENSCPRG00005012398) GTF3A (ENSCPRG00005012372) MTIF3 (ENSCPRG00005012370) LNX2 (ENSCPRG00005012365) #31 ENSCPRG00005012363 #32 ENSCPRG00005012327 #33 FLT3 (ENSCPRG00005012285) Australian saltwater crocodile MODERN SPECIES 43 RLIM (ENSCPRG00005007446) SLC16A2 (ENSCPRG00005007409) ENSCPRG00005007391 ##26 ENSCPRG00005007375 #28 ENSCPRG00005007366 ENSCPRG00005007357 ENSCPRG00005007344 CHIC1 (ENSCPRG00005007333) CDX4 (ENSCPRG00005007327) ENSCPRG00005007318 ENSCPRG00005007286 ARHGEF9 (ENSCPRG00005007266) AMER1 (ENSCPRG00005007262) ASB12 (ENSCPRG00005007255) MTMR8 (ENSCPRG00005007245) ENSCPRG00005007243 #22 ENSCPRG00005007237 ENSCPRG00005007232 ENSCPRG00005007228 ENSCPRG00005007212 KLF8 (ENSCPRG00005007207) ENSCPRG00005007197 ENSCPRG00005007192 ENSCPRG00005007179 GLOD5 (ENSCPRG00005007176) ENSCPRG00005007169 ENSCPRG00005007161 ENSCPRG00005007153 ENSCPRG00005007149 NSDHL (ENSCPRG00005007145) ENSCPRG00005007140 Aves ANCESTRAL SPECIES ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 African ostrich MODERN SPECIES 1023 SKA3 (ENSSCUG00000015229) MRPL57 (ENSSCUG00000015226) ZDHHC20 (ENSSCUG00000015222) MICU2 (ENSSCUG00000015216) FGF9 (ENSSCUG00000015215) SGCG (ENSSCUG00000015211) ENSSCUG00000015207 ENSSCUG00000015203 TNFRSF19 (ENSSCUG00000015199) MIPEP (ENSSCUG00000015164) ENSSCUG00000015139 SPATA13 (ENSSCUG00000015134) AMER2 (ENSSCUG00000015123) MTMR6 (ENSSCUG00000015115) NUP58 (ENSSCUG00000015110) SHISA2 (ENSSCUG00000015106) #22 ATP8A2 (ENSSCUG00000015083) #23 RNF6 (ENSSCUG00000015076) #24 CDK8 (ENSSCUG00000015060) #25 WASF3 (ENSSCUG00000015048) #26 GPR12 (ENSSCUG00000015043) #27 USP12 (ENSSCUG00000015037) #28 RPL21 (ENSSCUG00000015026) #30 RASL11A (ENSSCUG00000015022) GTF3A (ENSSCUG00000015016) MTIF3 (ENSSCUG00000015015) LNX2 (ENSSCUG00000015009) #31 ENSSCUG00000015006 #32 ENSSCUG00000014998 FLT3 (ENSSCUG00000014991) PAN3 (ENSSCUG00000014968) #36 Neognathae ANCESTRAL SPECIES 1 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Neognathae_b ANCESTRAL SPECIES ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Golden eagle DUPLICATION Golden eagle MODERN SPECIES 10 SKA3 (ENSACCG00020006745) MRPL57 (ENSACCG00020006737) ZDHHC20 (ENSACCG00020006714) MICU2 (ENSACCG00020006698) FGF9 (ENSACCG00020006682) SGCG (ENSACCG00020006666) SACS (ENSACCG00020006641) TNFRSF19 (ENSACCG00020016810) MIPEP (ENSACCG00020016806) ENSACCG00020016801 ENSACCG00020016796 SPATA13 (ENSACCG00020016788) AMER2 (ENSACCG00020016782) MTMR6 (ENSACCG00020016777) NUP58 (ENSACCG00020016768) SHISA2 (ENSACCG00020016760) #22 ATP8A2 (ENSACCG00020016509) #23 ENSACCG00020016028 #24 CDK8 (ENSACCG00020016007) #25 WASF3 (ENSACCG00020015986) #26 GPR12 (ENSACCG00020015967) #27 USP12 (ENSACCG00020015953) #28 RPL21 (ENSACCG00020015935) #30 RASL11A (ENSACCG00020015924) GTF3A (ENSACCG00020015904) MTIF3 (ENSACCG00020015893) LNX2 (ENSACCG00020015880) #31 ENSACCG00020015871 #32 GSX1 (ENSACCG00020015856) ENSACCG00020015849 #33 CDX2 (ENSACCG00020015840) Golden eagle MODERN SPECIES 13 SLC16A2 (ENSACCG00020011336) ENSACCG00020011348 ##26 ENSACCG00020011366 ##27 ENSACCG00020011380 #28 ENSACCG00020011387 ENSACCG00020011398 ENSACCG00020011411 CHIC1 (ENSACCG00020011419) CDX4 (ENSACCG00020011431) ENSACCG00020011443 ENSACCG00020011472 ARHGEF9 (ENSACCG00020011562) AMER1 (ENSACCG00020007175) ASB12 (ENSACCG00020007207) MTMR8 (ENSACCG00020007219) ENSACCG00020007240 #22 ENSACCG00020007253 ENSACCG00020007279 KLF8 (ENSACCG00020007297) ENSACCG00020007333 ENSACCG00020007368 ENSACCG00020007384 ENSACCG00020007403 ENSACCG00020007416 ENSACCG00020007427 NSDHL (ENSACCG00020007445) ENSACCG00020007462 VAMP7 (ENSACCG00020007483) POLR1D (ENSACCG00020007496) ENSACCG00020007508 ENSACCG00020007522 Kakapo DUPLICATION Kakapo MODERN SPECIES 11 SAP18 (ENSSHBG00005013746) SKA3 (ENSSHBG00005013721) MRPL57 (ENSSHBG00005013709) ZDHHC20 (ENSSHBG00005013660) MICU2 (ENSSHBG00005013610) FGF9 (ENSSHBG00005013589) SGCG (ENSSHBG00005013580) SACS (ENSSHBG00005013556) TNFRSF19 (ENSSHBG00005013524) MIPEP (ENSSHBG00005013500) ENSSHBG00005013482 SPATA13 (ENSSHBG00005013408) AMER2 (ENSSHBG00005013391) MTMR6 (ENSSHBG00005013375) NUP58 (ENSSHBG00005013350) SHISA2 (ENSSHBG00005013296) #22 ATP8A2 (ENSSHBG00005013242) #23 RNF6 (ENSSHBG00005013216) #24 CDK8 (ENSSHBG00005013211) #25 WASF3 (ENSSHBG00005013203) #26 GPR12 (ENSSHBG00005013192) #27 ENSSHBG00005013185 #28 ENSSHBG00005013174 #28 RPL21 (ENSSHBG00005013149) #30 RASL11A (ENSSHBG00005013133) GTF3A (ENSSHBG00005013114) MTIF3 (ENSSHBG00005013103) LNX2 (ENSSHBG00005013084) #31 ENSSHBG00005013073 #32 GSX1 (ENSSHBG00005013067) ENSSHBG00005013057 #33 Kakapo MODERN SPECIES 1 ENSSHBG00005007226 #28 ENSSHBG00005007216 ENSSHBG00005007194 ENSSHBG00005007161 CHIC1 (ENSSHBG00005007141) ENSSHBG00005007119 ENSSHBG00005007104 ENSSHBG00005007096 ENSSHBG00005007071 ENSSHBG00005007043 ENSSHBG00005007030 ARHGEF9 (ENSSHBG00005007008) AMER1 (ENSSHBG00005006988) ASB12 (ENSSHBG00005006973) MTMR8 (ENSSHBG00005006939) ENSSHBG00005006915 #22 ENSSHBG00005006890 ENSSHBG00005006862 KLF8 (ENSSHBG00005006843) ENSSHBG00005006819 ENSSHBG00005006804 ENSSHBG00005006622 GLOD5 (ENSSHBG00005006584) ENSSHBG00005006567 ENSSHBG00005006551 ENSSHBG00005006536 CETN1 (ENSSHBG00005006526) NSDHL (ENSSHBG00005006505) ENSSHBG00005006484 VAMP7 (ENSSHBG00005006450) ENSSHBG00005000618 Passeriformes ANCESTRAL SPECIES 1 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647.x.a ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Great tit MODERN SPECIES SKA3 (ENSPMJG00000017533) SAP18 (ENSPMJG00000017531) ZDHHC20 (ENSPMJG00000017530) MICU2 (ENSPMJG00000017529) FGF9 (ENSPMJG00000017523) SGCG (ENSPMJG00000017510) SACS (ENSPMJG00000017508) TNFRSF19 (ENSPMJG00000017505) MIPEP (ENSPMJG00000017503) ENSPMJG00000017502 ENSPMJG00000017501 SPATA13 (ENSPMJG00000017500) AMER2 (ENSPMJG00000017498) MTMR6 (ENSPMJG00000017497) NUP58 (ENSPMJG00000017496) SHISA2 (ENSPMJG00000017495) #22 ATP8A2 (ENSPMJG00000017494) #23 RNF6 (ENSPMJG00000017493) #24 ENSPMJG00000017492 #25 WASF3 (ENSPMJG00000017491) #26 GPR12 (ENSPMJG00000017490) #27 USP12 (ENSPMJG00000017489) #28 RPL21 (ENSPMJG00000017486) #30 RASL11A (ENSPMJG00000017485) GTF3A (ENSPMJG00000017482) ENSPMJG00000017481 LNX2 (ENSPMJG00000017480) #31 ENSPMJG00000017479 #32 GSX1 (ENSPMJG00000017478) ENSPMJG00000017477 #33 CDX2 (ENSPMJG00000017476) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647.w ENSGT00940000155647.x.a ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 Flycatcher MODERN SPECIES SAP18 (ENSFALG00000027918) SKA3 (ENSFALG00000025453) MRPL57 (ENSFALG00000014840) ZDHHC20 (ENSFALG00000008716) MICU2 (ENSFALG00000008713) FGF9 (ENSFALG00000008712) SGCG (ENSFALG00000008702) SACS (ENSFALG00000008700) TNFRSF19 (ENSFALG00000008697) MIPEP (ENSFALG00000008695) ENSFALG00000027961 ENSFALG00000008692 ENSFALG00000008691 AMER2 (ENSFALG00000008690) MTMR6 (ENSFALG00000008688) ENSFALG00000014826 #22 NUP58 (ENSFALG00000008681) ENSFALG00000008667 #23 RNF6 (ENSFALG00000008663) #24 WASF3 (ENSFALG00000008659) #26 USP12 (ENSFALG00000008645) #28 RPL21 (ENSFALG00000027093) #30 RASL11A (ENSFALG00000025266) ENSFALG00000008614 ENSFALG00000025967 MTIF3 (ENSFALG00000008612) LNX2 (ENSFALG00000008604) #31 ENSFALG00000023517 #32 GSX1 (ENSFALG00000028458) ENSFALG00000008588 #33 CDX2 (ENSFALG00000014799) Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647.w ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Passeroidea ANCESTRAL SPECIES 5 ENSGT00940000159161 ENSGT00390000003152 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647.w ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Zebra finch MODERN SPECIES LATS2 (ENSTGUG00000011364) SAP18 (ENSTGUG00000011377) SKA3 (ENSTGUG00000011390) ENSTGUG00000011395 ZDHHC20 (ENSTGUG00000011398) MICU2 (ENSTGUG00000011401) FGF9 (ENSTGUG00000024103) SGCG (ENSTGUG00000011408) SACS (ENSTGUG00000011419) TNFRSF19 (ENSTGUG00000011424) MIPEP (ENSTGUG00000011437) ENSTGUG00000011452 SPATA13 (ENSTGUG00000011453) MTMR6 (ENSTGUG00000011465) NUP58 (ENSTGUG00000011475) SHISA2 (ENSTGUG00000023421) #22 ATP8A2 (ENSTGUG00000011487) #23 RNF6 (ENSTGUG00000011529) #24 CDK8 (ENSTGUG00000011534) #25 WASF3 (ENSTGUG00000011551) #26 GPR12 (ENSTGUG00000029743) #27 USP12 (ENSTGUG00000011564) #28 RPL21 (ENSTGUG00000011571) #30 RASL11A (ENSTGUG00000011581) GTF3A (ENSTGUG00000011584) MTIF3 (ENSTGUG00000011587) LNX2 (ENSTGUG00000011590) #31 ENSTGUG00000026413 #32 GSX1 (ENSTGUG00000011603) ENSTGUG00000011604 #33 CDX2 (ENSTGUG00000024715) Common canary MODERN SPECIES 4 LATS2 (ENSSCAG00000005394) SAP18 (ENSSCAG00000005398) SKA3 (ENSSCAG00000005404) MRPL57 (ENSSCAG00000005407) ZDHHC20 (ENSSCAG00000005409) MICU2 (ENSSCAG00000005418) FGF9 (ENSSCAG00000005425) SGCG (ENSSCAG00000005437) SACS (ENSSCAG00000005441) TNFRSF19 (ENSSCAG00000005453) MIPEP (ENSSCAG00000005502) ENSSCAG00000005840 SPATA13 (ENSSCAG00000005858) MTMR6 (ENSSCAG00000005900) NUP58 (ENSSCAG00000006012) SHISA2 (ENSSCAG00000006063) #22 ATP8A2 (ENSSCAG00000006152) #23 RNF6 (ENSSCAG00000006466) #24 CDK8 (ENSSCAG00000006481) #25 WASF3 (ENSSCAG00000006489) #26 GPR12 (ENSSCAG00000006491) #27 USP12 (ENSSCAG00000006508) #28 RPL21 (ENSSCAG00000006515) #30 RASL11A (ENSSCAG00000006526) GTF3A (ENSSCAG00000006534) MTIF3 (ENSSCAG00000006540) LNX2 (ENSSCAG00000006544) #31 ENSSCAG00000006550 #32 GSX1 (ENSSCAG00000006551) ENSSCAG00000006555 #33 CDX2 (ENSSCAG00000006556) Galloanserae ANCESTRAL SPECIES 1 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Anatidae ANCESTRAL SPECIES 16 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A.a ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Duck MODERN SPECIES ENSAPLG00000019735 MICU2 (ENSAPLG00000008715) ENSAPLG00000016835 FGF9 (ENSAPLG00000010854) ENSAPLG00000013344 ENSAPLG00000020789 SGCG (ENSAPLG00000013021) SACS (ENSAPLG00000012626) TNFRSF19 (ENSAPLG00000012295) MIPEP (ENSAPLG00000012053) ENSAPLG00000012026 SPATA13 (ENSAPLG00000001832) AMER2 (ENSAPLG00000030391) MTMR6 (ENSAPLG00000011530) NUP58 (ENSAPLG00000010853) SHISA2 (ENSAPLG00000026795) #22 ATP8A2 (ENSAPLG00000009563) #23 RNF6 (ENSAPLG00000009544) #24 CDK8 (ENSAPLG00000009252) #25 WASF3 (ENSAPLG00000005025) #26 GPR12 (ENSAPLG00000001069) #27 USP12 (ENSAPLG00000005359) #28 RPL21 (ENSAPLG00000005641) #30 RASL11A (ENSAPLG00000017444) ENSAPLG00000005957 MTIF3 (ENSAPLG00000006117) LNX2 (ENSAPLG00000005445) #31 ENSAPLG00000005977 #32 GSX1 (ENSAPLG00000024317) ENSAPLG00000026245 #33 CDX2 (ENSAPLG00000020255) Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 66 FGF9 (ENSABRG00000020425) SGCG (ENSABRG00000020381) SACS (ENSABRG00000020379) TNFRSF19 (ENSABRG00000020377) MIPEP (ENSABRG00000020374) ENSABRG00000020372 ENSABRG00000020369 SPATA13 (ENSABRG00000020366) AMER2 (ENSABRG00000020359) MTMR6 (ENSABRG00000020354) NUP58 (ENSABRG00000020335) SHISA2 (ENSABRG00000020328) #22 ATP8A2 (ENSABRG00000020282) #23 RNF6 (ENSABRG00000020261) #24 CDK8 (ENSABRG00000020224) #25 WASF3 (ENSABRG00000020213) #26 GPR12 (ENSABRG00000020211) #27 USP12 (ENSABRG00000020207) #28 RPL21 (ENSABRG00000020198) #30 RASL11A (ENSABRG00000020194) GTF3A (ENSABRG00000020186) MTIF3 (ENSABRG00000020183) LNX2 (ENSABRG00000020178) #31 ENSABRG00000020175 #32 GSX1 (ENSABRG00000020173) ENSABRG00000020168 #33 CDX2 (ENSABRG00000020167) Pink-footed goose MODERN SPECIES 96 SLC16A2 (ENSABRG00000018764) ENSABRG00000018772 ##26 ENSABRG00000018774 ##27 ENSABRG00000018778 #28 ENSABRG00000018784 ENSABRG00000018791 ENSABRG00000018797 CHIC1 (ENSABRG00000018812) CDX4 (ENSABRG00000018815) ENSABRG00000018825 ENSABRG00000018840 ARHGEF9 (ENSABRG00000018881) AMER1 (ENSABRG00000018886) ASB12 (ENSABRG00000018888) MTMR8 (ENSABRG00000018927) ENSABRG00000019058 #22 ENSABRG00000019079 ENSABRG00000019105 ENSABRG00000019112 ENSABRG00000019119 ENSABRG00000019124 ENSABRG00000019128 GLOD5 (ENSABRG00000019136) ENSABRG00000019139 ENSABRG00000019141 ENSABRG00000019142 ENSABRG00000019144 ENSABRG00000019147 ENSABRG00000019155 NSDHL (ENSABRG00000019160) ENSABRG00000019173 Phasianidae ANCESTRAL SPECIES ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643.a #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Japanese quail MODERN SPECIES SKA3 (ENSCJPG00005001324) MRPL57 (ENSCJPG00005001321) ZDHHC20 (ENSCJPG00005001295) MICU2 (ENSCJPG00005001289) FGF9 (ENSCJPG00005001284) ENSCJPG00005001265 SGCG (ENSCJPG00005001241) SACS (ENSCJPG00005001232) TNFRSF19 (ENSCJPG00005001222) MIPEP (ENSCJPG00005001215) ENSCJPG00005001209 SPATA13 (ENSCJPG00005001193) AMER2 (ENSCJPG00005001175) MTMR6 (ENSCJPG00005001162) NUP58 (ENSCJPG00005001132) SHISA2 (ENSCJPG00005001121) #22 ATP8A2 (ENSCJPG00005000945) #23 RNF6 (ENSCJPG00005000859) #24 CDK8 (ENSCJPG00005000850) #25 WASF3 (ENSCJPG00005000831) #26 GPR12 (ENSCJPG00005000813) #27 USP12 (ENSCJPG00005000797) #28 RPL21 (ENSCJPG00005000787) #30 RASL11A (ENSCJPG00005020451) GTF3A (ENSCJPG00005020448) MTIF3 (ENSCJPG00005020447) LNX2 (ENSCJPG00005020445) #31 ENSCJPG00005020444 #32 GSX1 (ENSCJPG00005020440) ENSCJPG00005020438 #33 CDX2 (ENSCJPG00005020437) Phasianidae_b ANCESTRAL SPECIES ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00960000189633 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.b #30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643.a #32 ENSGT00940000154361.A ENSGT00940000163955 #33 ENSGT00940000161261 Turkey MODERN SPECIES ENSMGAG00000018257 ENSMGAG00000021200 ENSMGAG00000019450 #32 LNX2 (ENSMGAG00000015103) #31 ENSMGAG00000015102 ENSMGAG00000015101 ENSMGAG00000019583 ENSMGAG00000015105 #30 USP12 (ENSMGAG00000015106) #28 ENSMGAG00000015107 #26 ENSMGAG00000015597 #27 ENSMGAG00000021988 #25 ENSMGAG00000015108 #25 ENSMGAG00000015109 #24 ENSMGAG00000015110 #23 ENSMGAG00000015604 #22 ENSMGAG00000022106 ENSMGAG00000015111 ENSMGAG00000015112 ENSMGAG00000015113 ENSMGAG00000018751 ENSMGAG00000015114 ENSMGAG00000015116 ENSMGAG00000015115 ENSMGAG00000015117 ENSMGAG00000020745 ENSMGAG00000015119 ENSMGAG00000015120 ENSMGAG00000014699 SPCS2 (ENSMGAG00000022693) ENSMGAG00000015296 Chicken DUPLICATION Chicken MODERN SPECIES SKA3 (ENSGALG00010005463) MRPL57 (ENSGALG00010005448) ZDHHC20 (ENSGALG00010005429) MICU2 (ENSGALG00010005396) FGF9 (ENSGALG00010005381) SGCG (ENSGALG00010006220) SACS (ENSGALG00010006202) TNFRSF19 (ENSGALG00010006155) MIPEP (ENSGALG00010006132) ENSGALG00010006110 ENSGALG00010006102 SPATA13 (ENSGALG00010006078) AMER2 (ENSGALG00010006024) MTMR6 (ENSGALG00010006016) NUP58 (ENSGALG00010005988) SHISA2 (ENSGALG00010005970) #22 ATP8A2 (ENSGALG00010005935) #23 RNF6 (ENSGALG00010005891) #24 CDK8 (ENSGALG00010005875) #25 WASF3 (ENSGALG00010005848) #26 GPR12 (ENSGALG00010005843) #27 USP12 (ENSGALG00010005830) #28 RPL21 (ENSGALG00010005785) #30 RASL11A (ENSGALG00010005784) GTF3A (ENSGALG00010005143) MTIF3 (ENSGALG00010005123) LNX2 (ENSGALG00010005132) #31 ENSGALG00010005082 #32 GSX1 (ENSGALG00010004613) ENSGALG00010004598 #33 CDX2 (ENSGALG00010004589) Chicken MODERN SPECIES 33 ENSGALG00010011644 ENSGALG00010011641 ##26 GPR12L (ENSGALG00010015901) ##27 USP12-like (ENSGALG00010011545) #28 RASL11AL (ENSGALG00010012123) ENSGALG00010012096 ENSGALG00010012093 CHIC1 (ENSGALG00010012081) CDX4 (ENSGALG00010012068) ENSGALG00010012065 ENSGALG00010012055 ARHGEF9 (ENSGALG00010012034) AMER1 (ENSGALG00010013356) ASB12 (ENSGALG00010013382) MTMR8 (ENSGALG00010013369) ENSGALG00010011920 #22 C8orf48 (ENSGALG00010011909) RRAGA (ENSGALG00010011898) KLF8 (ENSGALG00010011866) ENSGALG00010011823 KCTD12 (ENSGALG00010011333) ENSGALG00010012145 GLOD5 (ENSGALG00010012140) ENSGALG00010012137 ENSGALG00010012128 ENSGALG00010011648 GATD3AL2 (ENSGALG00010011734) ENSGALG00010012874 CETN1 (ENSGALG00010012469) NSDHL (ENSGALG00010012857) ENSGALG00010012673 Mammalia ANCESTRAL SPECIES ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00940000164592 ENSGT00940000164372 ENSGT00950000182922.a.a.b ##30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A Platypus MODERN SPECIES 12 ENSOANG00000042119 MRPL57 (ENSOANG00000009036) ZDHHC20 (ENSOANG00000009037) MICU2 (ENSOANG00000009038) FGF9 (ENSOANG00000009032) SGCG (ENSOANG00000050533) SACS (ENSOANG00000009040) TNFRSF19 (ENSOANG00000041714) MIPEP (ENSOANG00000009042) ENSOANG00000048236 ENSOANG00000050231 SPATA13 (ENSOANG00000009044) ENSOANG00000050877 MTMR6 (ENSOANG00000009046) NUP58 (ENSOANG00000009047) ENSOANG00000009048 #22 ATP8A2 (ENSOANG00000009049) #23 CDK8 (ENSOANG00000009050) #25 WASF3 (ENSOANG00000009051) #26 GPR12 (ENSOANG00000009052) #27 USP12 (ENSOANG00000009053) #28 ENSOANG00000009054 ##30 RASL11A (ENSOANG00000009056) GTF3A (ENSOANG00000038706) ENSOANG00000009057 LNX2 (ENSOANG00000009060) #31 ENSOANG00000051147 #32 GSX1 (ENSOANG00000040381) ENSOANG00000009064 #33 ENSOANG00000043986 ENSOANG00000009066 #34 Theria ANCESTRAL SPECIES 1 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530 #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 Marsupialia ANCESTRAL SPECIES 5 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530.m #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000161208 ENSGT00940000155647 ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 Opossum MODERN SPECIES 3 MRPL57 (ENSMODG00000024156) ENSMODG00000024155 MICU2 (ENSMODG00000008317) FGF9 (ENSMODG00000051310) ENSMODG00000036589 SGCG (ENSMODG00000008369) SACS (ENSMODG00000008408) ENSMODG00000040908 TNFRSF19 (ENSMODG00000008428) MIPEP (ENSMODG00000008482) ENSMODG00000024154 ENSMODG00000045525 AMER2 (ENSMODG00000047078) MTMR6 (ENSMODG00000008567) NUP58 (ENSMODG00000008614) SHISA2 (ENSMODG00000008622) #22 ATP8A2 (ENSMODG00000008674) #23 ENSMODG00000008684 ENSMODG00000028404 RNF6 (ENSMODG00000038831) #24 CDK8 (ENSMODG00000008753) #25 WASF3 (ENSMODG00000008795) #26 ENSMODG00000008874 #28 RPL21 (ENSMODG00000008923) ##30 RASL11A (ENSMODG00000008941) GTF3A (ENSMODG00000008955) ENSMODG00000008962 ENSMODG00000050662 LNX2 (ENSMODG00000008989) #31 ENSMODG00000047217 #32 GSX1 (ENSMODG00000009010) Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530.m #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000161208 ENSGT00940000155647.u ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 Diprotodontia ANCESTRAL SPECIES 11 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000158214.f ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530.m #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000161208 ENSGT00940000155647.u ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000158214.f ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00940000154103.a ENSGT00530000063529.A ENSGT00940000158055 ENSGT00730000111111 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00940000158530.m #24 ENSGT00940000157104 #25 ENSGT00950000182962.a.a #26 ENSGT01060000248564.b.a.b.a #27 ENSGT00940000153284.a #28 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000161208 ENSGT00940000155647.u ENSGT00390000014424 ENSGT00940000158381 #31 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000162542 ENSGT00940000161261 koala MODERN SPECIES 66 ENSPCIG00000023159 SGCG (ENSPCIG00000013780) SACS (ENSPCIG00000035553) TNFRSF19 (ENSPCIG00000033639) MIPEP (ENSPCIG00000016191) ENSPCIG00000016190 SPATA13 (ENSPCIG00000016188) AMER2 (ENSPCIG00000025961) ENSPCIG00000025960 MTMR6 (ENSPCIG00000025959) NUP58 (ENSPCIG00000025958) SHISA2 (ENSPCIG00000025956) #22 ATP8A2 (ENSPCIG00000036982) #23 RNF6 (ENSPCIG00000026870) #24 CDK8 (ENSPCIG00000017352) #25 WASF3 (ENSPCIG00000037264) #26 GPR12 (ENSPCIG00000023230) #27 USP12 (ENSPCIG00000022249) #28 RPL21 (ENSPCIG00000022238) ##30 RASL11A (ENSPCIG00000031842) GTF3A (ENSPCIG00000022226) MTIF3 (ENSPCIG00000022222) LNX2 (ENSPCIG00000022213) #31 ENSPCIG00000022208 #32 GSX1 (ENSPCIG00000022205) PDX1 (ENSPCIG00000022204) CDX2 (ENSPCIG00000022200) Common wonbat MODERN SPECIES 1049 MRPL57 (ENSVURG00010021365) ENSVURG00010021361 MICU2 (ENSVURG00010021345) FGF9 (ENSVURG00010021337) SGCG (ENSVURG00010021330) SACS (ENSVURG00010021328) TNFRSF19 (ENSVURG00010021322) MIPEP (ENSVURG00010020756) ENSVURG00010020706 ENSVURG00010020702 SPATA13 (ENSVURG00010020696) ENSVURG00010020689 AMER2 (ENSVURG00010020683) MTMR6 (ENSVURG00010020677) NUP58 (ENSVURG00010020660) SHISA2 (ENSVURG00010020652) #22 ATP8A2 (ENSVURG00010020634) #23 RNF6 (ENSVURG00010020625) #24 CDK8 (ENSVURG00010020617) #25 WASF3 (ENSVURG00010020608) #26 ENSVURG00010020587 #28 ENSVURG00010020571 ##30 RASL11A (ENSVURG00010020566) ENSVURG00010020554 ENSVURG00010020547 LNX2 (ENSVURG00010020536) #31 ENSVURG00010020531 #32 GSX1 (ENSVURG00010020523) ENSVURG00010020522 PDX1 (ENSVURG00010020518) CDX2 (ENSVURG00010020516) Wallaby MODERN SPECIES 8725 SHISA2 (ENSMEUG00000015906) #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000026771 ENSSHAG00000021551 ENSSHAG00000030373 MICU2 (ENSSHAG00000021851) FGF9 (ENSSHAG00000006630) SGCG (ENSSHAG00000027279) SACS (ENSSHAG00000001615) TNFRSF19 (ENSSHAG00000006393) MIPEP (ENSSHAG00000008246) ENSSHAG00000030679 ENSSHAG00000009645 ENSSHAG00000009807 ENSSHAG00000021441 ENSSHAG00000013319 ENSSHAG00000013570 ENSSHAG00000001962 #22 ENSSHAG00000006347 #23 ENSSHAG00000011392 #24 CDK8 (ENSSHAG00000012149) #25 WASF3 (ENSSHAG00000013579) #26 GPR12 (ENSSHAG00000030631) #27 USP12 (ENSSHAG00000016123) #28 RPL21 (ENSSHAG00000000845) ##30 RASL11A (ENSSHAG00000016468) GTF3A (ENSSHAG00000016965) ENSSHAG00000017006 LNX2 (ENSSHAG00000017242) #31 ENSSHAG00000025491 #32 GSX1 (ENSSHAG00000029989) ENSSHAG00000017812 #33 CDX2 (ENSSHAG00000017862) Eutheria ANCESTRAL SPECIES 17 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Boreoeutheria ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Euarchontoglires ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Primates ANCESTRAL SPECIES 29 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Strepsirrhini ANCESTRAL SPECIES 41 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00950000182922.a.a.a.b.b.a.a.a ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b.d ENSGT00390000016695 ENSGT00940000159187 Lemuriformes ANCESTRAL SPECIES 18 ENSGT00940000161739 ENSGT00390000016366 ENSGT00940000153139.A ENSGT00940000159161 ENSGT00390000003152.j.y ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b.d ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000153284.a.h #28 ENSGT00950000182922.a.a.a.b.b.a.a.a ##30 ENSGT00940000161208 ENSGT00940000155647 Lemuriformes_a ANCESTRAL SPECIES 88 ENSGT00940000161739 ENSGT00390000016366 ENSGT00940000153139.A ENSGT00940000159161 ENSGT00390000003152.j.y ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b.d ENSGT00390000016695 ENSGT00940000159187 Coquerels sifaka MODERN SPECIES 436 ENSPCOG00000018549 #25 RNF6 (ENSPCOG00000016517) #24 ENSPCOG00000017916 SHISA2 (ENSPCOG00000019923) #22 ENSPCOG00000024164 #23 NUP58 (ENSPCOG00000024888) MTMR6 (ENSPCOG00000017178) AMER2 (ENSPCOG00000002150) SPATA13 (ENSPCOG00000021014) ENSPCOG00000010750 ENSPCOG00000020115 MIPEP (ENSPCOG00000022864) TNFRSF19 (ENSPCOG00000024171) SACS (ENSPCOG00000014915) SGCG (ENSPCOG00000024563) USP12 (ENSPCOG00000027540) #28 ENSPCOG00000024417 ##30 RASL11A (ENSPCOG00000009447) GTF3A (ENSPCOG00000016742) Greater bamboo lemur MODERN SPECIES 422 EEF1AKMT1 (ENSPSMG00000008127) XPO4 (ENSPSMG00000008116) LATS2 (ENSPSMG00000008078) ENSPSMG00000008063 ENSPSMG00000008045 SKA3 (ENSPSMG00000008038) MRPL57 (ENSPSMG00000007998) ZDHHC20 (ENSPSMG00000007964) MICU2 (ENSPSMG00000007889) FGF9 (ENSPSMG00000007865) GPR12 (ENSPSMG00000007847) #27 WASF3 (ENSPSMG00000007838) #26 CDK8 (ENSPSMG00000007790) #25 RNF6 (ENSPSMG00000007702) #24 ENSPSMG00000007665 SHISA2 (ENSPSMG00000007570) #22 ATP8A2 (ENSPSMG00000007530) #23 NUP58 (ENSPSMG00000007315) MTMR6 (ENSPSMG00000007252) AMER2 (ENSPSMG00000007189) ENSPSMG00000007142 ENSPSMG00000007076 ENSPSMG00000007073 MIPEP (ENSPSMG00000007000) Mouse lemur MODERN SPECIES 4 EEF1AKMT1 (ENSMICG00000004634) XPO4 (ENSMICG00000004636) LATS2 (ENSMICG00000033886) SAP18 (ENSMICG00000046836) ENSMICG00000042277 SKA3 (ENSMICG00000031401) ZDHHC20 (ENSMICG00000003725) MICU2 (ENSMICG00000006910) FGF9 (ENSMICG00000029695) GPR12 (ENSMICG00000045060) #27 WASF3 (ENSMICG00000027798) #26 CDK8 (ENSMICG00000012312) #25 RNF6 (ENSMICG00000012383) #24 ENSMICG00000004991 ENSMICG00000000413 #23 SHISA2 (ENSMICG00000045032) #22 NUP58 (ENSMICG00000000409) MTMR6 (ENSMICG00000000407) AMER2 (ENSMICG00000046626) SPATA13 (ENSMICG00000005346) ENSMICG00000045668 ENSMICG00000047845 MIPEP (ENSMICG00000036068) ENSMICG00000042745 SACS (ENSMICG00000034895) SGCG (ENSMICG00000038162) ENSMICG00000028275 ENSMICG00000006269 #28 RASL11A (ENSMICG00000029724) GTF3A (ENSMICG00000014763) MTIF3 (ENSMICG00000014777) Bushbaby MODERN SPECIES 221 ATP12A (ENSOGAG00000003804) ENSOGAG00000031608 IFT88 (ENSOGAG00000006694) IL17D (ENSOGAG00000001196) EEF1AKMT1 (ENSOGAG00000033563) XPO4 (ENSOGAG00000000048) LATS2 (ENSOGAG00000005624) SAP18 (ENSOGAG00000010062) SKA3 (ENSOGAG00000003206) MRPL57 (ENSOGAG00000003209) ZDHHC20 (ENSOGAG00000014118) MICU2 (ENSOGAG00000007540) FGF9 (ENSOGAG00000032363) ENSOGAG00000027240 ENSOGAG00000000927 SHISA2 (ENSOGAG00000026431) #22 ATP8A2 (ENSOGAG00000003827) #23 ENSOGAG00000031047 NUP58 (ENSOGAG00000003821) MTMR6 (ENSOGAG00000003817) AMER2 (ENSOGAG00000029901) SPATA13 (ENSOGAG00000003885) ENSOGAG00000003890 ENSOGAG00000030892 MIPEP (ENSOGAG00000032896) TNFRSF19 (ENSOGAG00000004232) SACS (ENSOGAG00000032087) SGCG (ENSOGAG00000004395) Haplorrhini ANCESTRAL SPECIES 43 ENSGT00940000153229.A.b ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A Simiiformes ANCESTRAL SPECIES 22 ENSGT00940000153229.A.b ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A Platyrrhini ANCESTRAL SPECIES 23 ENSGT00390000002395 #34 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.d ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000163801 ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B Cebidae ANCESTRAL SPECIES 26 ENSGT00390000002395 #34 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.d ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000163801 ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B Marmoset MODERN SPECIES 17 GSX1 (ENSCJAG00000080181) POLR1D (ENSCJAG00000044669) LNX2 (ENSCJAG00000019379) #31 MTIF3 (ENSCJAG00000019378) GTF3A (ENSCJAG00000077697) RASL11A (ENSCJAG00000019369) ENSCJAG00000044684 ##30 ENSCJAG00000069611 ENSCJAG00000073678 USP12 (ENSCJAG00000019344) #28 ENSCJAG00000086732 GPR12 (ENSCJAG00000019338) #27 WASF3 (ENSCJAG00000019325) #26 CDK8 (ENSCJAG00000019296) #25 RNF6 (ENSCJAG00000019285) #24 SHISA2 (ENSCJAG00000056356) #22 ENSCJAG00000077899 ATP8A2 (ENSCJAG00000019263) #23 NUP58 (ENSCJAG00000019231) ENSCJAG00000087157 MTMR6 (ENSCJAG00000019209) AMER2 (ENSCJAG00000019200) PABPC3 (ENSCJAG00000018953) ENSCJAG00000081042 CENPJ (ENSCJAG00000018946) RNF17 (ENSCJAG00000018937) ATP12A (ENSCJAG00000018931) ENSCJAG00000064735 TEKT4 (ENSCJAG00000018908) ENSCJAG00000087232 ENSCJAG00000076264 Cebidae_a ANCESTRAL SPECIES 28 ENSGT00390000002395 #34 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.d ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00950000182894.B ENSGT00550000076453 ENSGT00940000163801 ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B Bolivian squirrel monkey MODERN SPECIES 42 PDX1 (ENSSBOG00000031436) GSX1 (ENSSBOG00000026103) ENSSBOG00000015416 ENSSBOG00000028482 ENSSBOG00000014497 LNX2 (ENSSBOG00000025148) #31 MTIF3 (ENSSBOG00000030469) GTF3A (ENSSBOG00000002098) RASL11A (ENSSBOG00000025363) ENSSBOG00000031441 ##30 ENSSBOG00000023626 #28 GPR12 (ENSSBOG00000015914) #27 WASF3 (ENSSBOG00000025202) #26 CDK8 (ENSSBOG00000031790) #25 RNF6 (ENSSBOG00000022531) #24 SHISA2 (ENSSBOG00000010466) #22 ATP8A2 (ENSSBOG00000019269) #23 NUP58 (ENSSBOG00000026929) MTMR6 (ENSSBOG00000028806) AMER2 (ENSSBOG00000031615) ENSSBOG00000023677 CENPJ (ENSSBOG00000025606) RNF17 (ENSSBOG00000021661) ENSSBOG00000033552 ATP12A (ENSSBOG00000020405) TEKT4 (ENSSBOG00000034878) ENSSBOG00000031599 ANKRD20A1 (ENSSBOG00000029403) SPATA13 (ENSSBOG00000026058) ENSSBOG00000034652 ENSSBOG00000025239 Capuchin MODERN SPECIES 103 PDX1 (ENSCCAG00000036295) GSX1 (ENSCCAG00000025929) ENSCCAG00000021349 LNX2 (ENSCCAG00000020368) #31 ENSCCAG00000026568 MTIF3 (ENSCCAG00000036048) GTF3A (ENSCCAG00000029730) RASL11A (ENSCCAG00000021842) ENSCCAG00000031101 ##30 USP12 (ENSCCAG00000023369) #28 ENSCCAG00000021328 GPR12 (ENSCCAG00000020040) #27 WASF3 (ENSCCAG00000029799) #26 CDK8 (ENSCCAG00000037833) #25 RNF6 (ENSCCAG00000037182) #24 SHISA2 (ENSCCAG00000027476) #22 ATP8A2 (ENSCCAG00000034301) #23 NUP58 (ENSCCAG00000020906) MTMR6 (ENSCCAG00000035695) AMER2 (ENSCCAG00000030462) PABPC3 (ENSCCAG00000037208) CENPJ (ENSCCAG00000006256) RNF17 (ENSCCAG00000026725) Mas night monkey MODERN SPECIES 343 FGF9 (ENSANAG00000017308) ENSANAG00000033332 ENSANAG00000033204 ENSANAG00000031654 ENSANAG00000022011 ENSANAG00000020073 ENSANAG00000015017 ENSANAG00000033775 ENSANAG00000031755 ENSANAG00000025862 GPR12 (ENSANAG00000019460) #27 ENSANAG00000019364 WASF3 (ENSANAG00000032101) #26 CDK8 (ENSANAG00000019361) #25 RNF6 (ENSANAG00000029061) #24 SHISA2 (ENSANAG00000035019) #22 ENSANAG00000032345 ATP8A2 (ENSANAG00000031539) #23 ENSANAG00000031404 ZDHHC20 (ENSANAG00000029922) ENSANAG00000034653 ENSANAG00000031766 SGCG (ENSANAG00000035637) SACS (ENSANAG00000035314) ENSANAG00000022043 TNFRSF19 (ENSANAG00000032061) MIPEP (ENSANAG00000027557) ENSANAG00000021371 ENSANAG00000019521 SPATA13 (ENSANAG00000033761) ENSANAG00000030780 Catarrhini ANCESTRAL SPECIES 21 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555 ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00940000154936.qb.b ENSGT00730000111659 ENSGT00940000154936.qb.a ENSGT00950000183171.B Hominoidea ANCESTRAL SPECIES 21 ENSGT00940000153229.A.b ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555 ENSGT00530000063675.a.d ENSGT00940000160341.b ENSGT00940000154335.a.k ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00730000111659.f.a Gibbon MODERN SPECIES 20 PLEKHA6 (ENSNLEG00000034071) GOLT1A (ENSNLEG00000014238) KISS1 (ENSNLEG00000014233) REN (ENSNLEG00000014231) ENSNLEG00000014224 SOX13 (ENSNLEG00000014186) ENSNLEG00000027348 ENSNLEG00000031914 ENSNLEG00000029582 ENSNLEG00000031421 LAX1 (ENSNLEG00000032816) GPR12 (ENSNLEG00000028807) #27 WASF3 (ENSNLEG00000014045) #26 CDK8 (ENSNLEG00000014010) #25 RNF6 (ENSNLEG00000013999) #24 SHISA2 (ENSNLEG00000030975) #22 ATP8A2 (ENSNLEG00000013987) #23 ENSNLEG00000029346 NUP58 (ENSNLEG00000013934) MTMR6 (ENSNLEG00000032498) AMER2 (ENSNLEG00000029416) PABPC3 (ENSNLEG00000018338) ENSNLEG00000034516 ATP12A (ENSNLEG00000013878) RNF17 (ENSNLEG00000013780) CENPJ (ENSNLEG00000013675) ENSNLEG00000013530 PARP4 (ENSNLEG00000013523) ENSNLEG00000034330 ENSNLEG00000033719 ENSNLEG00000013512 Hominidae ANCESTRAL SPECIES 23 ENSGT00940000153229.A.b ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154335.a.k ENSGT00940000160341.b ENSGT00530000063675.a.d ENSGT00940000160555 ENSGT00390000003223.v ENSGT00940000154103.a ENSGT00940000154666.d.a.b Orangutan MODERN SPECIES 4 CDX2 (ENSPPYG00000005242) ENSPPYG00000005241 PDX1 (ENSPPYG00000005240) GSX1 (ENSPPYG00000005239) ENSPPYG00000005238 #32 LNX2 (ENSPPYG00000005237) #31 MTIF3 (ENSPPYG00000005236) GTF3A (ENSPPYG00000005235) RASL11A (ENSPPYG00000005234) RPL21 (ENSPPYG00000005233) ##30 USP12 (ENSPPYG00000005232) #28 GPR12 (ENSPPYG00000005231) #27 WASF3 (ENSPPYG00000005230) #26 CDK8 (ENSPPYG00000005229) #25 RNF6 (ENSPPYG00000005228) #24 SHISA2 (ENSPPYG00000030544) #22 ENSPPYG00000005224 #23 ENSPPYG00000036462 NUP58 (ENSPPYG00000005222) MTMR6 (ENSPPYG00000005221) AMER2 (ENSPPYG00000005220) PABPC3 (ENSPPYG00000005219) PARP4 (ENSPPYG00000031938) ENSPPYG00000040040 ATP12A (ENSPPYG00000005214) RNF17 (ENSPPYG00000005215) CENPJ (ENSPPYG00000005216) ENSPPYG00000032322 ENSPPYG00000005212 SPATA13 (ENSPPYG00000005211) ENSPPYG00000031206 Homo/Pan/Gorilla group ANCESTRAL SPECIES 23 ENSGT00940000153229.A.b ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00390000018316.b.a.a.a.k.a.a ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154335.a.k.a ENSGT00940000160555 ENSGT00390000003223.v.a ENSGT00940000154936.qb.b.d ENSGT00940000154103.a ENSGT00940000154666.d.a.b Homo/Pan group ANCESTRAL SPECIES 22 ENSGT00940000153229.A.b ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00390000018316.b.a.a.a.k.a.a ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000160555 ENSGT00390000003223.v.a ENSGT00940000154936.qb.b.d ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00940000154936.qb.b.c.b Pan ANCESTRAL SPECIES 22 ENSGT00940000161261 ENSGT00390000015470.z.b ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00390000018316.b.a.a.a.k.a.a ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000160555 ENSGT00390000003223.v.a ENSGT00940000154936.qb.b.d ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00940000154936.qb.b.c.b Bonobo MODERN SPECIES 4 CDX2 (ENSPPAG00000032963) ENSPPAG00000032440 ENSPPAG00000032720 GSX1 (ENSPPAG00000032556) ENSPPAG00000028138 LNX2 (ENSPPAG00000027444) #31 MTIF3 (ENSPPAG00000027304) GTF3A (ENSPPAG00000034725) RASL11A (ENSPPAG00000027996) ENSPPAG00000042860 ##30 ENSPPAG00000007246 #28 GPR12 (ENSPPAG00000007707) #27 WASF3 (ENSPPAG00000035699) #26 CDK8 (ENSPPAG00000035126) #25 RNF6 (ENSPPAG00000035870) #24 SHISA2 (ENSPPAG00000032206) #22 ATP8A2 (ENSPPAG00000029372) #23 ENSPPAG00000021172 NUP58 (ENSPPAG00000032663) MTMR6 (ENSPPAG00000035079) ENSPPAG00000033197 PRKRIP1 (ENSPPAG00000032145) CENPJ (ENSPPAG00000030314) RNF17 (ENSPPAG00000028779) ATP12A (ENSPPAG00000027786) PARP4 (ENSPPAG00000024134) ENSPPAG00000017976 ENSPPAG00000000209 SPATA13 (ENSPPAG00000037517) ENSPPAG00000034747 ENSPPAG00000018262 Chimpanzee MODERN SPECIES 4 CDX2 (ENSPTRG00000043330) ENSPTRG00000005737 PDX1 (ENSPTRG00000005736) GSX1 (ENSPTRG00000005735) POLR1D (ENSPTRG00000005734) LNX2 (ENSPTRG00000005733) #31 MTIF3 (ENSPTRG00000005732) GTF3A (ENSPTRG00000005730) RASL11A (ENSPTRG00000005729) RPL21 (ENSPTRG00000005728) ##30 USP12 (ENSPTRG00000005727) #28 GPR12 (ENSPTRG00000046989) #27 WASF3 (ENSPTRG00000005725) #26 CDK8 (ENSPTRG00000005724) #25 RNF6 (ENSPTRG00000005723) #24 SHISA2 (ENSPTRG00000047295) #22 ATP8A2 (ENSPTRG00000005721) #23 ENSPTRG00000051186 NUP58 (ENSPTRG00000005719) MTMR6 (ENSPTRG00000005718) AMER2 (ENSPTRG00000005717) PABPC3 (ENSPTRG00000022593) CENPJ (ENSPTRG00000005715) RNF17 (ENSPTRG00000005713) ATP12A (ENSPTRG00000005712) PARP4 (ENSPTRG00000005711) ENSPTRG00000041287 C1QTNF9 (ENSPTRG00000005710) SPATA13 (ENSPTRG00000032583) ENSPTRG00000052437 ENSPTRG00000031237 Human MODERN SPECIES 4 URAD (ENSG00000183463) CDX2 (ENSG00000165556) PDX1 (ENSG00000139515) GSX1 (ENSG00000169840) POLR1D (ENSG00000186184) LNX2 (ENSG00000139517) #31 MTIF3 (ENSG00000122033) GTF3A (ENSG00000122034) RASL11A (ENSG00000122035) RPL21 (ENSG00000122026) ##30 USP12 (ENSG00000152484) #28 GPR12 (ENSG00000132975) #27 WASF3 (ENSG00000132970) #26 CDK8 (ENSG00000132964) #25 RNF6 (ENSG00000127870) #24 SHISA2 (ENSG00000180730) #22 ATP8A2 (ENSG00000132932) #23 NUP58 (ENSG00000139496) MTMR6 (ENSG00000139505) AMER2 (ENSG00000165566) PABPC3 (ENSG00000151846) CENPJ (ENSG00000151849) RNF17 (ENSG00000132972) ATP12A (ENSG00000075673) PARP4 (ENSG00000102699) C1QTNF9 (ENSG00000240654) SPATA13 (ENSG00000182957) C1QTNF9B (ENSG00000205863) MIPEP (ENSG00000027001) TNFRSF19 (ENSG00000127863) SACS (ENSG00000151835) Gorilla MODERN SPECIES 4 URAD (ENSGGOG00000005489) CDX2 (ENSGGOG00000005487) PDX1 (ENSGGOG00000002569) GSX1 (ENSGGOG00000005011) POLR1D (ENSGGOG00000004235) LNX2 (ENSGGOG00000016167) #31 MTIF3 (ENSGGOG00000041079) GTF3A (ENSGGOG00000008407) RASL11A (ENSGGOG00000008785) ENSGGOG00000003002 ##30 ENSGGOG00000011358 #28 GPR12 (ENSGGOG00000000849) #27 WASF3 (ENSGGOG00000012518) #26 CDK8 (ENSGGOG00000006569) #25 RNF6 (ENSGGOG00000006568) #24 ENSGGOG00000025679 #22 ATP8A2 (ENSGGOG00000003045) #23 ENSGGOG00000025330 NUP58 (ENSGGOG00000003677) ENSGGOG00000022839 AMER2 (ENSGGOG00000000208) PABPC3 (ENSGGOG00000013146) CENPJ (ENSGGOG00000014528) RNF17 (ENSGGOG00000014491) ATP12A (ENSGGOG00000001316) ENSGGOG00000042373 PARP4 (ENSGGOG00000002940) ENSGGOG00000022919 ENSGGOG00000042426 ENSGGOG00000009441 C1QTNF9 (ENSGGOG00000037689) Cercopithecidae ANCESTRAL SPECIES 23 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000165378.d ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555 ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00940000154936.qb.a ENSGT00730000111659 ENSGT00940000154936.qb.b ENSGT00950000183171.B Rhinopithecus ANCESTRAL SPECIES 56 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000165378.d ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00390000017004.a.a.j ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555 ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00730000111659.c ENSGT00940000154936.qb.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00940000154936.qb.a Black snub-nosed monkey MODERN SPECIES 1391 CDX2 (ENSRBIG00000038667) PDX1 (ENSRBIG00000039353) GSX1 (ENSRBIG00000032182) ENSRBIG00000036378 LNX2 (ENSRBIG00000028850) #31 MTIF3 (ENSRBIG00000027271) GTF3A (ENSRBIG00000044964) RASL11A (ENSRBIG00000043749) ENSRBIG00000036802 ##30 ENSRBIG00000041212 #28 GPR12 (ENSRBIG00000001744) #27 WASF3 (ENSRBIG00000033396) #26 CDK8 (ENSRBIG00000040781) #25 ENSRBIG00000044340 RNF6 (ENSRBIG00000035200) #24 SHISA2 (ENSRBIG00000029204) #22 Golden snub-nosed monkey MODERN SPECIES 866 ENSRROG00000032238 CDK8 (ENSRROG00000041981) #25 RNF6 (ENSRROG00000034458) #24 SHISA2 (ENSRROG00000038302) #22 ENSRROG00000042067 ENSRROG00000036251 ATP8A2 (ENSRROG00000013514) #23 NUP58 (ENSRROG00000016815) MTMR6 (ENSRROG00000030654) AMER2 (ENSRROG00000037652) PABPC3 (ENSRROG00000036871) PARP4 (ENSRROG00000040417) CENPJ (ENSRROG00000040950) RNF17 (ENSRROG00000022801) ATP12A (ENSRROG00000024300) ENSRROG00000038325 Cercopithecinae ANCESTRAL SPECIES 20 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000165378.d ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555.z ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154936.qb.a ENSGT00730000111659 ENSGT00940000154936.qb.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00950000183171.B Vervet Monkey MODERN SPECIES 22 FLT3 (ENSCSAG00000017973) URAD (ENSCSAG00000017975) CDX2 (ENSCSAG00000017976) PDX1 (ENSCSAG00000017977) GSX1 (ENSCSAG00000017979) ENSCSAG00000017980 #32 LNX2 (ENSCSAG00000017981) #31 MTIF3 (ENSCSAG00000017982) GTF3A (ENSCSAG00000017983) RASL11A (ENSCSAG00000017985) ENSCSAG00000017986 #28 GPR12 (ENSCSAG00000018592) #27 WASF3 (ENSCSAG00000017987) #26 CDK8 (ENSCSAG00000017989) #25 RNF6 (ENSCSAG00000017991) #24 SHISA2 (ENSCSAG00000017992) #22 ATP8A2 (ENSCSAG00000017997) #23 NUP58 (ENSCSAG00000018000) MTMR6 (ENSCSAG00000018003) AMER2 (ENSCSAG00000018590) PARP4 (ENSCSAG00000018004) CENPJ (ENSCSAG00000018006) RNF17 (ENSCSAG00000018019) ATP12A (ENSCSAG00000018032) ENSCSAG00000018589 ENSCSAG00000018033 SPATA13 (ENSCSAG00000018037) MIPEP (ENSCSAG00000018039) TNFRSF19 (ENSCSAG00000018042) SACS (ENSCSAG00000018044) SGCG (ENSCSAG00000018048) Cercopithecinae_a ANCESTRAL SPECIES 19 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000165378.d ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555.z ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00730000111659.a ENSGT00940000154936.qb.b ENSGT00730000111659.b ENSGT00940000154936.qb.a Macaca ANCESTRAL SPECIES 19 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555.z ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00730000111659.b ENSGT00940000154936.qb.b ENSGT00730000111659.a ENSGT00940000154936.qb.a Macaca_a ANCESTRAL SPECIES 19 ENSGT00390000003643 #32 ENSGT00940000158381 #31 ENSGT01100000263493.a.b.a.a.b.a.b.b ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##30 ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.a.b.a ENSGT00940000153284.a.h.i.a #28 ENSGT00940000164709.a.b.b.b.b.a ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT01100000263539.b.a.a.a.b.b.a.a.a.a.b.a.a.b ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555.y ENSGT00940000160555.z ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154936.qb.b ENSGT00940000154103.a ENSGT00940000167556.b.b.a.b.a.a.a.b.b.a.b.b.b.a.a.a.a.a.a ENSGT00940000154936.qb.a ENSGT00950000183171.B Rhesus MODERN SPECIES 8 LNX2 (ENSMMUG00000058786) #31 ENSMMUG00000059867 MTIF3 (ENSMMUG00000009030) GTF3A (ENSMMUG00000009029) RASL11A (ENSMMUG00000049650) ENSMMUG00000058755 ##30 ENSMMUG00000054994 USP12 (ENSMMUG00000021425) #28 ENSMMUG00000050226 ENSMMUG00000057481 GPR12 (ENSMMUG00000060819) #27 WASF3 (ENSMMUG00000005055) #26 ENSMMUG00000057852 CDK8 (ENSMMUG00000014841) #25 RNF6 (ENSMMUG00000013900) #24 SHISA2 (ENSMMUG00000062341) #22 ATP8A2 (ENSMMUG00000008520) #23 NUP58 (ENSMMUG00000018420) MTMR6 (ENSMMUG00000018419) AMER2 (ENSMMUG00000020837) PABPC3 (ENSMMUG00000020835) ENSMMUG00000058531 CENPJ (ENSMMUG00000014611) RNF17 (ENSMMUG00000014610) ATP12A (ENSMMUG00000022608) C1QTNF9 (ENSMMUG00000006945) SPATA13 (ENSMMUG00000022610) ENSMMUG00000053448 ENSMMUG00000054665 MIPEP (ENSMMUG00000006942) TNFRSF19 (ENSMMUG00000004237) Crab-eating macaque MODERN SPECIES 8 LNX2 (ENSMFAG00000045245) #31 ENSMFAG00000050995 MTIF3 (ENSMFAG00000045045) GTF3A (ENSMFAG00000044837) RASL11A (ENSMFAG00000044628) ENSMFAG00000053340 ##30 ENSMFAG00000062305 USP12 (ENSMFAG00000031734) #28 ENSMFAG00000050832 ENSMFAG00000058696 GPR12 (ENSMFAG00000033581) #27 WASF3 (ENSMFAG00000006706) #26 ENSMFAG00000055987 CDK8 (ENSMFAG00000003010) #25 RNF6 (ENSMFAG00000030171) #24 SHISA2 (ENSMFAG00000061772) #22 ENSMFAG00000050919 ATP8A2 (ENSMFAG00000037099) #23 NUP58 (ENSMFAG00000042591) MTMR6 (ENSMFAG00000032748) ENSMFAG00000021323 ENSMFAG00000035098 ENSMFAG00000058500 CENPJ (ENSMFAG00000036617) RNF17 (ENSMFAG00000032388) ATP12A (ENSMFAG00000009943) ENSMFAG00000002446 SPATA13 (ENSMFAG00000033090) ENSMFAG00000056502 ENSMFAG00000039133 MIPEP (ENSMFAG00000002942) Pig-tailed macaque MODERN SPECIES 165 PDX1 (ENSMNEG00000032095) GSX1 (ENSMNEG00000032682) ENSMNEG00000008630 ENSMNEG00000034652 LNX2 (ENSMNEG00000040860) #31 MTIF3 (ENSMNEG00000032443) GTF3A (ENSMNEG00000043473) RASL11A (ENSMNEG00000033345) ENSMNEG00000034115 ##30 ENSMNEG00000039505 #28 GPR12 (ENSMNEG00000010974) #27 WASF3 (ENSMNEG00000028711) #26 CDK8 (ENSMNEG00000031167) #25 RNF6 (ENSMNEG00000000673) #24 ATP8A2 (ENSMNEG00000037319) #23 SHISA2 (ENSMNEG00000040542) #22 NUP58 (ENSMNEG00000028363) MTMR6 (ENSMNEG00000031980) AMER2 (ENSMNEG00000033197) ENSMNEG00000008076 PABPC3 (ENSMNEG00000042936) PARP4 (ENSMNEG00000044999) CENPJ (ENSMNEG00000030726) RNF17 (ENSMNEG00000011234) ATP12A (ENSMNEG00000040278) ENSMNEG00000043680 ENSMNEG00000014169 SPATA13 (ENSMNEG00000029569) ENSMNEG00000030738 ENSMNEG00000024509 ENSMNEG00000042998 Cercopithecinae_b ANCESTRAL SPECIES 28 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000165378.d ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555.z ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00730000111659.a ENSGT00940000154936.qb.b ENSGT00730000111659.b ENSGT00940000154936.qb.a Olive baboon MODERN SPECIES 6 PDX1 (ENSPANG00000012683) ENSPANG00000047094 GSX1 (ENSPANG00000017129) ENSPANG00000038544 ENSPANG00000020259 LNX2 (ENSPANG00000012983) #31 MTIF3 (ENSPANG00000005047) GTF3A (ENSPANG00000012593) RASL11A (ENSPANG00000044196) ENSPANG00000011984 ##30 USP12 (ENSPANG00000011533) #28 GPR12 (ENSPANG00000003061) #27 WASF3 (ENSPANG00000009058) #26 CDK8 (ENSPANG00000001990) #25 RNF6 (ENSPANG00000005719) #24 SHISA2 (ENSPANG00000002307) #22 ENSPANG00000048591 ATP8A2 (ENSPANG00000000263) #23 NUP58 (ENSPANG00000015485) MTMR6 (ENSPANG00000024014) AMER2 (ENSPANG00000008318) PABPC3 (ENSPANG00000032575) PARP4 (ENSPANG00000006504) CENPJ (ENSPANG00000011535) RNF17 (ENSPANG00000007640) ATP12A (ENSPANG00000025664) SPATA13 (ENSPANG00000012759) ENSPANG00000040969 MIPEP (ENSPANG00000007641) TNFRSF19 (ENSPANG00000002309) SACS (ENSPANG00000018632) Cercopithecinae_d ANCESTRAL SPECIES 93 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00910000147903 ENSGT00550000075160.x ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.b.a.a.a.m ##30 ENSGT00940000153284.a.h.j #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000165378.d ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000153773.a.a.b.b ENSGT00940000160555.z ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000154103.a ENSGT00940000154666.d.a.b ENSGT00730000111659.a ENSGT00940000154936.qb.b ENSGT00730000111659.b ENSGT00950000183171.B Sooty mangabey MODERN SPECIES 255 GSX1 (ENSCATG00000028004) ENSCATG00000002488 ENSCATG00000030710 LNX2 (ENSCATG00000035354) #31 MTIF3 (ENSCATG00000007775) GTF3A (ENSCATG00000032361) RASL11A (ENSCATG00000033838) ENSCATG00000032591 ##30 ENSCATG00000038452 #28 ENSCATG00000018180 GPR12 (ENSCATG00000018217) #27 WASF3 (ENSCATG00000037570) #26 ENSCATG00000032759 CDK8 (ENSCATG00000021984) #25 RNF6 (ENSCATG00000035806) #24 SHISA2 (ENSCATG00000023199) #22 ATP8A2 (ENSCATG00000034806) #23 NUP58 (ENSCATG00000027937) MTMR6 (ENSCATG00000007562) AMER2 (ENSCATG00000029851) PABPC3 (ENSCATG00000029313) PARP4 (ENSCATG00000035770) CENPJ (ENSCATG00000030574) RNF17 (ENSCATG00000040352) Drill MODERN SPECIES 1324 FLT3 (ENSMLEG00000037398) CDX2 (ENSMLEG00000037430) PDX1 (ENSMLEG00000032316) ENSMLEG00000041805 ENSMLEG00000041048 LNX2 (ENSMLEG00000039062) #31 MTIF3 (ENSMLEG00000039110) GTF3A (ENSMLEG00000039703) RASL11A (ENSMLEG00000036089) ENSMLEG00000024280 ##30 ENSMLEG00000033598 #28 GPR12 (ENSMLEG00000002545) #27 WASF3 (ENSMLEG00000040168) #26 CDK8 (ENSMLEG00000040071) #25 RNF6 (ENSMLEG00000038569) #24 SHISA2 (ENSMLEG00000034103) #22 ENSMLEG00000036990 #23 ENSMLEG00000000254 NUP58 (ENSMLEG00000014833) MTMR6 (ENSMLEG00000030105) AMER2 (ENSMLEG00000032191) PABPC3 (ENSMLEG00000042214) PARP4 (ENSMLEG00000041053) CENPJ (ENSMLEG00000037886) RNF17 (ENSMLEG00000030227) ATP12A (ENSMLEG00000031149) SPATA13 (ENSMLEG00000039736) ENSMLEG00000015853 ENSMLEG00000040945 MIPEP (ENSMLEG00000034973) TNFRSF19 (ENSMLEG00000039065) Euarchontoglires_A ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Tree shrew MODERN SPECIES 1472 ENSTBEG00000008710 #22 ATP8A2 (ENSTBEG00000006595) #23 Glires ANCESTRAL SPECIES 22 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Lagomorpha ANCESTRAL SPECIES 98 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000003152.i.b Pika MODERN SPECIES 9800 SHISA2 (ENSOPRG00000005752) #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 19 ENSOCUG00000029511 IL17RA (ENSOCUG00000009160) ENSOCUG00000037850 HDHD5 (ENSOCUG00000009168) CECR2 (ENSOCUG00000006950) ENSOCUG00000006959 ENSOCUG00000025885 ENSOCUG00000035158 GPR12 (ENSOCUG00000016272) #27 WASF3 (ENSOCUG00000003536) #26 CDK8 (ENSOCUG00000015595) #25 RNF6 (ENSOCUG00000015583) #24 ENSOCUG00000017521 ENSOCUG00000032256 ENSOCUG00000034736 SHISA2 (ENSOCUG00000015248) #22 ATP8A2 (ENSOCUG00000015211) #23 NUP58 (ENSOCUG00000017158) MTMR6 (ENSOCUG00000012992) AMER2 (ENSOCUG00000007604) SPATA13 (ENSOCUG00000010087) ENSOCUG00000011793 ENSOCUG00000035479 MIPEP (ENSOCUG00000011782) TNFRSF19 (ENSOCUG00000011779) SACS (ENSOCUG00000010916) SGCG (ENSOCUG00000003788) ENSOCUG00000038996 ENSOCUG00000024117 FGF9 (ENSOCUG00000000732) MICU2 (ENSOCUG00000029502) Rabbit MODERN SPECIES 1401 ENSOCUG00000026457 FAAH2 (ENSOCUG00000029015) ENSOCUG00000032805 ENSOCUG00000003505 ENSOCUG00000022866 SPIN4 (ENSOCUG00000017930) ENSOCUG00000029401 ENSOCUG00000031797 ENSOCUG00000027796 ENSOCUG00000011267 ENSOCUG00000030864 AMER1 (ENSOCUG00000001613) ASB12 (ENSOCUG00000023698) MTMR8 (ENSOCUG00000001617) ENSOCUG00000023259 ENSOCUG00000029232 #22 ZC4H2 (ENSOCUG00000013393) ZC3H12B (ENSOCUG00000006130) LAS1L (ENSOCUG00000006760) ENSOCUG00000024108 ENSOCUG00000000149 ENSOCUG00000021042 VSIG4 (ENSOCUG00000004172) ENSOCUG00000022713 HEPH (ENSOCUG00000014866) ENSOCUG00000023386 ENSOCUG00000022819 EDA2R (ENSOCUG00000022282) ENSOCUG00000039136 AR (ENSOCUG00000003142) ENSOCUG00000032785 Rodentia ANCESTRAL SPECIES 22 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Rodentia_B ANCESTRAL SPECIES 48 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Myomorpha ANCESTRAL SPECIES 32 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Muroidea ANCESTRAL SPECIES 25 ENSGT00390000003838 ENSGT00940000162114 ENSGT00390000011439 ENSGT00390000011737 ENSGT00940000161898 ENSGT00940000159715 ENSGT00390000011048 ENSGT01050000244891.C.c.b ENSGT00530000063715.b ENSGT00940000162731 ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00840000130852 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b Muroidea_A ANCESTRAL SPECIES 10 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT01050000247125 ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b ENSGT00390000011048 Cricetidae ANCESTRAL SPECIES 15 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT01050000247125 ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b ENSGT00390000011048 Cricetidae_B ANCESTRAL SPECIES 11 ENSGT00940000153139.A ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b ENSGT00390000011048 Northern American deer mouse MODERN SPECIES 22 Eef1akmt1 (ENSPEMG00000031126) Xpo4 (ENSPEMG00000017255) Lats2 (ENSPEMG00000000178) ENSPEMG00000030110 Ska3 (ENSPEMG00000020939) Mrpl57 (ENSPEMG00000003727) Zdhhc20 (ENSPEMG00000020348) Micu2 (ENSPEMG00000013668) Fgf9 (ENSPEMG00000028908) ENSPEMG00000015984 Rcbtb1 (ENSPEMG00000012943) ENSPEMG00000020517 Setdb2 (ENSPEMG00000020697) Cab39l (ENSPEMG00000012244) Cdadc1 (ENSPEMG00000020295) Shisa2 (ENSPEMG00000030541) #22 Atp8a2 (ENSPEMG00000019433) #23 ENSPEMG00000025963 Gm49336 (ENSPEMG00000019398) Mtmr6 (ENSPEMG00000019883) Amer2 (ENSPEMG00000025065) Spata13 (ENSPEMG00000020262) C1qtnf9 (ENSPEMG00000019616) ENSPEMG00000027608 Mipep (ENSPEMG00000020216) Tnfrsf19 (ENSPEMG00000008508) ENSPEMG00000024354 Sacs (ENSPEMG00000000064) Sgcg (ENSPEMG00000019438) ENSPEMG00000030665 Arl11 (ENSPEMG00000026867) Prairie vole MODERN SPECIES 4 ENSMOCG00000018977 Ska3 (ENSMOCG00000017435) Mrpl57 (ENSMOCG00000014838) Zdhhc20 (ENSMOCG00000020906) ENSMOCG00000016347 Micu2 (ENSMOCG00000007162) Fgf9 (ENSMOCG00000023005) ENSMOCG00000022640 ENSMOCG00000021827 Rcbtb1 (ENSMOCG00000015644) ENSMOCG00000006162 ENSMOCG00000008534 Setdb2 (ENSMOCG00000021987) Cab39l (ENSMOCG00000016772) Cdadc1 (ENSMOCG00000002433) Shisa2 (ENSMOCG00000020664) #22 Atp8a2 (ENSMOCG00000015692) #23 ENSMOCG00000019987 ENSMOCG00000014830 Gm49336 (ENSMOCG00000003936) Mtmr6 (ENSMOCG00000022575) Amer2 (ENSMOCG00000019134) Spata13 (ENSMOCG00000001538) ENSMOCG00000000624 C1qtnf9 (ENSMOCG00000000316) Mipep (ENSMOCG00000020940) Tnfrsf19 (ENSMOCG00000018683) Sacs (ENSMOCG00000006049) Sgcg (ENSMOCG00000021418) Arl11 (ENSMOCG00000006454) Ptgdr (ENSMOCG00000002135) Cricetinae ANCESTRAL SPECIES 18 ENSGT00940000153139.A ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT01050000247125 ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b ENSGT00390000011048 Chinese hamster chok1gshd MODERN SPECIES 3 Xpo4 (ENSCGRG00001004627) Lats2 (ENSCGRG00001020388) ENSCGRG00001017316 Ska3 (ENSCGRG00001020376) Mrpl57 (ENSCGRG00001003685) Zdhhc20 (ENSCGRG00001016155) Micu2 (ENSCGRG00001019591) Fgf9 (ENSCGRG00001000618) ENSCGRG00001000235 ENSCGRG00001016056 ENSCGRG00001017298 ENSCGRG00001017420 Setdb2 (ENSCGRG00001011194) Cab39l (ENSCGRG00001018025) Cdadc1 (ENSCGRG00001023418) Shisa2 (ENSCGRG00001022075) #22 Atp8a2 (ENSCGRG00001009592) #23 ENSCGRG00001018603 ##30 Gm49336 (ENSCGRG00001015740) Mtmr6 (ENSCGRG00001014238) Amer2 (ENSCGRG00001007624) Spata13 (ENSCGRG00001006938) C1qtnf9 (ENSCGRG00001022548) ENSCGRG00001024481 Mipep (ENSCGRG00001017795) Tnfrsf19 (ENSCGRG00001001233) Sacs (ENSCGRG00001022048) Sgcg (ENSCGRG00001017405) Arl11 (ENSCGRG00001010023) Ebpl (ENSCGRG00001001118) Kpna3 (ENSCGRG00001024675) Golden Hamster MODERN SPECIES 670 Gjb6 (ENSMAUG00000010441) Cryl1 (ENSMAUG00000008825) Ift88 (ENSMAUG00000013897) Eef1akmt1 (ENSMAUG00000000714) ENSMAUG00000004111 Lats2 (ENSMAUG00000020573) Mrpl57 (ENSMAUG00000012206) Zdhhc20 (ENSMAUG00000001184) Micu2 (ENSMAUG00000012604) Fgf9 (ENSMAUG00000019224) Rcbtb1 (ENSMAUG00000019433) ENSMAUG00000010572 Setdb2 (ENSMAUG00000012871) Cab39l (ENSMAUG00000021570) Cdadc1 (ENSMAUG00000016628) Shisa2 (ENSMAUG00000018919) #22 ENSMAUG00000016296 ENSMAUG00000010191 Mtmr6 (ENSMAUG00000015618) Amer2 (ENSMAUG00000007607) C1qtnf9 (ENSMAUG00000006985) Mipep (ENSMAUG00000003876) Tnfrsf19 (ENSMAUG00000019786) Sacs (ENSMAUG00000006270) Sgcg (ENSMAUG00000019618) Kpna3 (ENSMAUG00000020387) Spryd7 (ENSMAUG00000017680) Trim13 (ENSMAUG00000003724) ENSMAUG00000009681 Rnaseh2b (ENSMAUG00000016520) Gucy1b2 (ENSMAUG00000021397) Murinae ANCESTRAL SPECIES 16 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT01050000247125 ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a.f ENSGT00950000182865.b.a.b.b.b.a.e ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b ENSGT00390000011048 Mus ANCESTRAL SPECIES 8 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a.f ENSGT00950000182865.b.a.b.b.b.a.e.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00860000136284 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b Mus_A ANCESTRAL SPECIES 12 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a.f.b ENSGT00950000182865.b.a.b.b.b.a.e.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00860000136284 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b Mus_B ANCESTRAL SPECIES 11 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a.f.b ENSGT00950000182865.b.a.b.b.b.a.e.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00860000136284 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b Mus_C ANCESTRAL SPECIES 20 ENSGT00940000159161 ENSGT00390000003152.j ENSGT00500000045005 ENSGT00390000008171 ENSGT00940000153716.A ENSGT00950000183079.A.b.c.b ENSGT00940000160956 ENSGT00840000130852.a.a ENSGT00840000130852.b ENSGT00940000155814 ENSGT00950000182865.b.a.b.b.b.a.f.b ENSGT00950000182865.b.a.b.b.b.a.e.a ENSGT00940000158209 ENSGT00390000004360.a.b.a.a.b ENSGT00940000153676.b ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00860000136284 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000162731 ENSGT00530000063715.b ENSGT01050000244891.C.c.b spretus MODERN SPECIES 5 Lats2 (MGP_SPRETEiJ_G0020247) MGP_SPRETEiJ_G0020248 Ska3 (MGP_SPRETEiJ_G0020249) Mrpl57 (MGP_SPRETEiJ_G0020250) Zdhhc20 (MGP_SPRETEiJ_G0020251) Micu2 (MGP_SPRETEiJ_G0020252) Fgf9 (MGP_SPRETEiJ_G0020253) 1700129C05Rik (MGP_SPRETEiJ_G0020254) MGP_SPRETEiJ_G0020255 MGP_SPRETEiJ_G0020256 MGP_SPRETEiJ_G0020257 MGP_SPRETEiJ_G0020258 Setdb2 (MGP_SPRETEiJ_G0020259) Cab39l (MGP_SPRETEiJ_G0020260) Cdadc1 (MGP_SPRETEiJ_G0020261) Shisa2 (MGP_SPRETEiJ_G0020262) #22 Atp8a2 (MGP_SPRETEiJ_G0020263) #23 MGP_SPRETEiJ_G0020264 Gm49336 (MGP_SPRETEiJ_G0020265) Mtmr6 (MGP_SPRETEiJ_G0020266) Amer2 (MGP_SPRETEiJ_G0020267) Spata13 (MGP_SPRETEiJ_G0020268) C1qtnf9 (MGP_SPRETEiJ_G0020269) Mipep (MGP_SPRETEiJ_G0020270) Tnfrsf19 (MGP_SPRETEiJ_G0020271) Sacs (MGP_SPRETEiJ_G0020272) Sgcg (MGP_SPRETEiJ_G0020273) Arl11 (MGP_SPRETEiJ_G0020274) Ebpl (MGP_SPRETEiJ_G0020275) Kpna3 (MGP_SPRETEiJ_G0020276) Spryd7 (MGP_SPRETEiJ_G0020277) Steppe mouse MODERN SPECIES 3236 ENSMSIG00000026348 ENSMSIG00000026181 Cab39l (ENSMSIG00000026112) Cdadc1 (ENSMSIG00000025526) Shisa2 (ENSMSIG00000025508) #22 ENSMSIG00000025501 ENSMSIG00000025497 Atp8a2 (ENSMSIG00000025342) #23 Gm49336 (ENSMSIG00000025212) Mtmr6 (ENSMSIG00000025110) ENSMSIG00000025098 Spata13 (ENSMSIG00000025007) ENSMSIG00000025002 C1qtnf9 (ENSMSIG00000024999) Mipep (ENSMSIG00000024958) Tnfrsf19 (ENSMSIG00000024914) ENSMSIG00000024911 ENSMSIG00000024904 Sacs (ENSMSIG00000024830) Sgcg (ENSMSIG00000024802) Mouse MODERN SPECIES 5 Sap18 (ENSMUSG00000021963) Ska3 (ENSMUSG00000021965) Mrpl57 (ENSMUSG00000021967) Zdhhc20 (ENSMUSG00000021969) Micu2 (ENSMUSG00000021973) Fgf9 (ENSMUSG00000021974) 1700129C05Rik (ENSMUSG00000021977) Rcbtb1 (ENSMUSG00000035469) Phf11a (ENSMUSG00000044703) Phf11b (ENSMUSG00000091649) Phf11d (ENSMUSG00000068245) Phf11c (ENSMUSG00000091144) Setdb2 (ENSMUSG00000071350) Cab39l (ENSMUSG00000021981) Cdadc1 (ENSMUSG00000021982) Shisa2 (ENSMUSG00000044461) #22 Atp8a2 (ENSMUSG00000021983) #23 Gm49336 (ENSMUSG00000114797) Mtmr6 (ENSMUSG00000021987) Amer2 (ENSMUSG00000021986) Spata13 (ENSMUSG00000021990) C1qtnf9 (ENSMUSG00000071347) Mipep (ENSMUSG00000021993) Tnfrsf19 (ENSMUSG00000060548) Sacs (ENSMUSG00000048279) Sgcg (ENSMUSG00000035296) Arl11 (ENSMUSG00000043157) Ebpl (ENSMUSG00000021928) Kpna3 (ENSMUSG00000021929) Spryd7 (ENSMUSG00000021930) Trim13 (ENSMUSG00000035235) Ryukyu mouse MODERN SPECIES 5 Ska3 (MGP_CAROLIEiJ_G0019355) Zdhhc20 (MGP_CAROLIEiJ_G0019356) Micu2 (MGP_CAROLIEiJ_G0019357) Fgf9 (MGP_CAROLIEiJ_G0019358) 1700129C05Rik (MGP_CAROLIEiJ_G0019359) MGP_CAROLIEiJ_G0019360 MGP_CAROLIEiJ_G0019361 MGP_CAROLIEiJ_G0019364 MGP_CAROLIEiJ_G0019363 MGP_CAROLIEiJ_G0019365 MGP_CAROLIEiJ_G0019362 MGP_CAROLIEiJ_G0019366 Setdb2 (MGP_CAROLIEiJ_G0019367) Cab39l (MGP_CAROLIEiJ_G0019368) Cdadc1 (MGP_CAROLIEiJ_G0019369) Shisa2 (MGP_CAROLIEiJ_G0019370) #22 Atp8a2 (MGP_CAROLIEiJ_G0019371) #23 MGP_CAROLIEiJ_G0019372 Gm49336 (MGP_CAROLIEiJ_G0019373) Mtmr6 (MGP_CAROLIEiJ_G0019374) Amer2 (MGP_CAROLIEiJ_G0019375) Spata13 (MGP_CAROLIEiJ_G0019376) C1qtnf9 (MGP_CAROLIEiJ_G0019377) Mipep (MGP_CAROLIEiJ_G0019378) Tnfrsf19 (MGP_CAROLIEiJ_G0019379) Sacs (MGP_CAROLIEiJ_G0019380) Sgcg (MGP_CAROLIEiJ_G0019381) Arl11 (MGP_CAROLIEiJ_G0019382) Ebpl (MGP_CAROLIEiJ_G0019383) Kpna3 (MGP_CAROLIEiJ_G0019384) Spryd7 (MGP_CAROLIEiJ_G0019385) Shrew mouse MODERN SPECIES 21 Ska3 (MGP_PahariEiJ_G0030373) Mrpl57 (MGP_PahariEiJ_G0030374) Zdhhc20 (MGP_PahariEiJ_G0030375) Micu2 (MGP_PahariEiJ_G0030376) Fgf9 (MGP_PahariEiJ_G0030377) 1700129C05Rik (MGP_PahariEiJ_G0030378) MGP_PahariEiJ_G0030379 Rcbtb1 (MGP_PahariEiJ_G0030380) MGP_PahariEiJ_G0030381 MGP_PahariEiJ_G0030382 MGP_PahariEiJ_G0030383 MGP_PahariEiJ_G0030384 Setdb2 (MGP_PahariEiJ_G0030385) Cab39l (MGP_PahariEiJ_G0030386) Cdadc1 (MGP_PahariEiJ_G0030387) Shisa2 (MGP_PahariEiJ_G0030388) #22 Atp8a2 (MGP_PahariEiJ_G0030389) #23 MGP_PahariEiJ_G0030390 Gm49336 (MGP_PahariEiJ_G0030391) Mtmr6 (MGP_PahariEiJ_G0030392) Amer2 (MGP_PahariEiJ_G0030393) Spata13 (MGP_PahariEiJ_G0030394) C1qtnf9 (MGP_PahariEiJ_G0030395) Mipep (MGP_PahariEiJ_G0030396) Tnfrsf19 (MGP_PahariEiJ_G0030397) Sacs (MGP_PahariEiJ_G0030398) Sgcg (MGP_PahariEiJ_G0030399) Arl11 (MGP_PahariEiJ_G0030400) Ebpl (MGP_PahariEiJ_G0030401) Kpna3 (MGP_PahariEiJ_G0030402) Spryd7 (MGP_PahariEiJ_G0030403) Rat MODERN SPECIES 6 Zdhhc20 (ENSRNOG00000011024) Micu2 (ENSRNOG00000011168) Fgf9 (ENSRNOG00000011471) LOC691850 (ENSRNOG00000053522) ENSRNOG00000064315 RGD1563302 (ENSRNOG00000038917) Rcbtb1 (ENSRNOG00000021712) ENSRNOG00000067681 Phf11b (ENSRNOG00000064184) Phf11 (ENSRNOG00000053891) ENSRNOG00000065100 Setdb2 (ENSRNOG00000021680) LOC108348241 (ENSRNOG00000069746) Cab39l (ENSRNOG00000011603) Cdadc1 (ENSRNOG00000012209) Shisa2 (ENSRNOG00000012521) #22 Atp8a2 (ENSRNOG00000008053) #23 Nup58 (ENSRNOG00000012644) Mtmr6 (ENSRNOG00000012918) Amer2 (ENSRNOG00000013623) Spata13 (ENSRNOG00000013707) C1qtnf9 (ENSRNOG00000013793) ENSRNOG00000068540 Mipep (ENSRNOG00000013876) Tnfrsf19 (ENSRNOG00000014265) Sacs (ENSRNOG00000014509) AABR07018124.1 (ENSRNOG00000042281) Sgcg (ENSRNOG00000014603) LOC103693662 (ENSRNOG00000063996) Arl11 (ENSRNOG00000014653) Ebpl (ENSRNOG00000014659) Upper Galilee mountains blind mole rat MODERN SPECIES 1877 Fam124a (ENSNGAG00000017750) Gm4131 (ENSNGAG00000018345) Gucy1b2 (ENSNGAG00000005460) ENSNGAG00000000615 Dleu7 (ENSNGAG00000000600) Kcnrg (ENSNGAG00000012047) Trim13 (ENSNGAG00000012202) Spryd7 (ENSNGAG00000016929) Kpna3 (ENSNGAG00000017215) Ebpl (ENSNGAG00000006650) Arl11 (ENSNGAG00000004637) Rcbtb1 (ENSNGAG00000014551) Setdb2 (ENSNGAG00000013911) Cab39l (ENSNGAG00000000478) Cdadc1 (ENSNGAG00000002869) Shisa2 (ENSNGAG00000011290) #22 ENSNGAG00000013901 #23 ENSNGAG00000015895 Gm49336 (ENSNGAG00000014286) Mtmr6 (ENSNGAG00000010192) Amer2 (ENSNGAG00000018129) ENSNGAG00000019843 ENSNGAG00000013640 C1qtnf9 (ENSNGAG00000019211) ENSNGAG00000002512 Mipep (ENSNGAG00000018168) Tnfrsf19 (ENSNGAG00000001020) Sacs (ENSNGAG00000018196) Sgcg (ENSNGAG00000014500) ENSNGAG00000020670 ENSNGAG00000000921 Lesser Egyptian jerboa MODERN SPECIES 189 Shisa2 (ENSJJAG00000009486) #22 Atp8a2 (ENSJJAG00000010934) #23 ENSJJAG00000011367 ENSJJAG00000011769 Mtmr6 (ENSJJAG00000012282) Amer2 (ENSJJAG00000012723) Spata13 (ENSJJAG00000013440) ENSJJAG00000014200 C1qtnf9 (ENSJJAG00000014443) ENSJJAG00000012136 Mipep (ENSJJAG00000014901) Tnfrsf19 (ENSJJAG00000015658) Sacs (ENSJJAG00000016773) Sgcg (ENSJJAG00000010460) Fgf9 (ENSJJAG00000011529) Micu2 (ENSJJAG00000012402) Kangaroo rat MODERN SPECIES 554 Shisa2 (ENSDORG00000024227) #22 Atp8a2 (ENSDORG00000000239) #23 ENSDORG00000010165 Mtmr6 (ENSDORG00000025948) Rodentia_A ANCESTRAL SPECIES 22 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Hystricomorpha ANCESTRAL SPECIES 25 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647.c ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Hystricomorpha_a ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647.c ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Guinea pig MODERN SPECIES 6 FLT3 (ENSCPOG00000007285) CDX2 (ENSCPOG00000007276) PDX1 (ENSCPOG00000024534) ENSCPOG00000026854 ENSCPOG00000033461 #32 LNX2 (ENSCPOG00000010152) #31 MTIF3 (ENSCPOG00000010148) GTF3A (ENSCPOG00000010143) RASL11A (ENSCPOG00000031264) ENSCPOG00000008784 ##30 USP12 (ENSCPOG00000005241) #28 ENSCPOG00000020112 WASF3 (ENSCPOG00000010156) #26 CDK8 (ENSCPOG00000040435) #25 RNF6 (ENSCPOG00000009120) #24 SHISA2 (ENSCPOG00000009049) #22 ATP8A2 (ENSCPOG00000032003) #23 NUP58 (ENSCPOG00000012295) MTMR6 (ENSCPOG00000007270) AMER2 (ENSCPOG00000014858) ENSCPOG00000031549 ENSCPOG00000014970 ENSCPOG00000038067 ENSCPOG00000004523 MIPEP (ENSCPOG00000004508) TNFRSF19 (ENSCPOG00000012054) SACS (ENSCPOG00000038995) SGCG (ENSCPOG00000012598) ENSCPOG00000036289 MICU2 (ENSCPOG00000005345) ZDHHC20 (ENSCPOG00000011489) Hystricomorpha_b ANCESTRAL SPECIES 48 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647.c ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b.b ##30 ENSGT00940000153284.a.h #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000166713 ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A Long-tailed chinchilla MODERN SPECIES 204 PDX1 (ENSCLAG00000006652) GSX1 (ENSCLAG00000004357) ENSCLAG00000004320 #32 POLR1D (ENSCLAG00000017623) LNX2 (ENSCLAG00000004148) #31 MTIF3 (ENSCLAG00000004080) GTF3A (ENSCLAG00000003912) RASL11A (ENSCLAG00000003867) Rpl21 (ENSCLAG00000003656) ##30 USP12 (ENSCLAG00000003543) #28 GPR12 (ENSCLAG00000003409) #27 WASF3 (ENSCLAG00000003372) #26 CDK8 (ENSCLAG00000003311) #25 RNF6 (ENSCLAG00000003242) #24 ENSCLAG00000003030 SHISA2 (ENSCLAG00000008393) #22 ATP8A2 (ENSCLAG00000008021) #23 NUP58 (ENSCLAG00000007593) MTMR6 (ENSCLAG00000007452) ENSCLAG00000007038 ENSCLAG00000006203 ENSCLAG00000006127 MIPEP (ENSCLAG00000005794) TNFRSF19 (ENSCLAG00000005613) SACS (ENSCLAG00000005183) SGCG (ENSCLAG00000004918) FGF9 (ENSCLAG00000004805) MICU2 (ENSCLAG00000004724) ZDHHC20 (ENSCLAG00000004600) SKA3 (ENSCLAG00000004485) SAP18 (ENSCLAG00000004457) Degu MODERN SPECIES 79 ENSODEG00000019134 GSX1 (ENSODEG00000005135) ENSODEG00000006454 ENSODEG00000005294 LNX2 (ENSODEG00000006222) #31 MTIF3 (ENSODEG00000006818) GTF3A (ENSODEG00000006725) RASL11A (ENSODEG00000005775) ENSODEG00000005022 ##30 USP12 (ENSODEG00000006744) #28 GPR12 (ENSODEG00000006388) #27 WASF3 (ENSODEG00000005353) #26 ENSODEG00000005140 ENSODEG00000006456 #25 ENSODEG00000006190 #24 SHISA2 (ENSODEG00000006105) #22 ATP8A2 (ENSODEG00000006078) #23 NUP58 (ENSODEG00000004819) MTMR6 (ENSODEG00000005544) AMER2 (ENSODEG00000019360) ENSODEG00000004773 ENSODEG00000005055 ENSODEG00000019100 ENSODEG00000005920 ENSODEG00000004952 MIPEP (ENSODEG00000006682) SACS (ENSODEG00000005755) Naked mole-rat female MODERN SPECIES 2 PDX1 (ENSHGLG00000010243) GSX1 (ENSHGLG00000039858) ENSHGLG00000003202 #32 POLR1D (ENSHGLG00000039229) LNX2 (ENSHGLG00000003410) #31 MTIF3 (ENSHGLG00000003959) ENSHGLG00000004173 RASL11A (ENSHGLG00000005304) ENSHGLG00000005660 ##30 ENSHGLG00000006711 #28 GPR12 (ENSHGLG00000042343) #27 WASF3 (ENSHGLG00000006350) #26 ENSHGLG00000006446 CDK8 (ENSHGLG00000007563) #25 RNF6 (ENSHGLG00000008194) #24 SHISA2 (ENSHGLG00000009578) #22 ATP8A2 (ENSHGLG00000006272) #23 NUPL1 (ENSHGLG00000015434) ENSHGLG00000016388 ENSHGLG00000045249 ENSHGLG00000018983 ENSHGLG00000021069 ENSHGLG00000014175 MIPEP (ENSHGLG00000007271) TNFRSF19 (ENSHGLG00000014259) SACS (ENSHGLG00000014610) SGCG (ENSHGLG00000015643) FGF9 (ENSHGLG00000031951) MICU2 (ENSHGLG00000008372) ZDHHC20 (ENSHGLG00000010251) MRP63 (ENSHGLG00000045497) Sciuridae ANCESTRAL SPECIES 52 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.i.a #24 ENSGT00940000158530.j #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Eurasian red squirrel MODERN SPECIES 13 ENSSVLG00005000242 ENSSVLG00005000212 ENSSVLG00005020345 ENSSVLG00005020332 ENSSVLG00005020318 ENSSVLG00005019830 ENSSVLG00005019781 ENSSVLG00005019733 ENSSVLG00005019701 ENSSVLG00005019663 WASF3 (ENSSVLG00005019562) #26 ENSSVLG00005019373 CDK8 (ENSSVLG00005019288) #25 RNF6 (ENSSVLG00005019198) #24 ENSSVLG00005018523 SHISA2 (ENSSVLG00005018456) #22 ATP8A2 (ENSSVLG00005018089) #23 NUP58 (ENSSVLG00005017958) MTMR6 (ENSSVLG00005017887) AMER2 (ENSSVLG00005017855) SPATA13 (ENSSVLG00005017162) ENSSVLG00005017078 ENSSVLG00005016967 ENSSVLG00005016939 MIPEP (ENSSVLG00005016891) TNFRSF19 (ENSSVLG00005016700) ENSSVLG00005016637 SACS (ENSSVLG00005016468) SGCG (ENSSVLG00005016439) FGF9 (ENSSVLG00005016397) MICU2 (ENSSVLG00005016369) Marmotini ANCESTRAL SPECIES 55 ENSGT00940000153986.b.a ENSGT00390000007753.a ENSGT00390000001136 ENSGT00940000155727 ENSGT00390000015845 ENSGT00940000153968.a.b.a ENSGT00420000029824 ENSGT00940000154906.C.d ENSGT00940000161324 ENSGT00940000160084 ENSGT00940000156942 ENSGT00950000182997.a.a ENSGT00940000157755 ENSGT00390000018475 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Alpin marmot MODERN SPECIES 56 CDK8 (ENSMMMG00000012348) #25 ENSMMMG00000012373 #24 ENSMMMG00000012389 SHISA2 (ENSMMMG00000012400) #22 ATP8A2 (ENSMMMG00000012406) #23 NUP58 (ENSMMMG00000012454) MTMR6 (ENSMMMG00000012499) AMER2 (ENSMMMG00000012543) ENSMMMG00000012549 ENSMMMG00000012561 ENSMMMG00000012566 MIPEP (ENSMMMG00000012591) TNFRSF19 (ENSMMMG00000016267) SACS (ENSMMMG00000016306) SGCG (ENSMMMG00000016342) MYCBP2 (ENSMMMG00000016377) FBXL3 (ENSMMMG00000016891) CLN5 (ENSMMMG00000016897) ACOD1 (ENSMMMG00000016910) Marmotini_b ANCESTRAL SPECIES 126 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530.i.a #24 ENSGT00390000018475.z ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Squirrel MODERN SPECIES 288 ENSSTOG00000023023 SHISA2 (ENSSTOG00000015447) #22 ATP8A2 (ENSSTOG00000004266) #23 NUP58 (ENSSTOG00000003510) MTMR6 (ENSSTOG00000005192) AMER2 (ENSSTOG00000020906) ENSSTOG00000011324 ENSSTOG00000014401 ENSSTOG00000014407 MIPEP (ENSSTOG00000014379) ENSSTOG00000019938 TNFRSF19 (ENSSTOG00000010548) SACS (ENSSTOG00000026217) SGCG (ENSSTOG00000001465) Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 548 CDK8 (ENSUPAG00010006034) #25 RNF6 (ENSUPAG00010006079) #24 ENSUPAG00010006091 ENSUPAG00010006095 SHISA2 (ENSUPAG00010006141) #22 Arctic ground squirrel MODERN SPECIES 911 ENSUPAG00010023846 #22 ENSUPAG00010023849 ENSUPAG00010023851 Laurasiatheria ANCESTRAL SPECIES 20 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Laurasiatheria_a ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Laurasiatheria_b ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Laurasiatheria_c ANCESTRAL SPECIES 22 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104.m.b #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Chiroptera ANCESTRAL SPECIES 66 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104.m.a #25 ENSGT00940000157104.m.b #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 Microchiroptera ANCESTRAL SPECIES 46 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104.m.a #25 ENSGT00940000157104.m.b #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000157257 ENSGT00940000157614 ENSGT00950000183061.a.a.b ENSGT00550000075006 Greater horseshoe bat MODERN SPECIES 22 PDX1 (ENSRFEG00010003956) GSX1 (ENSRFEG00010003946) ENSRFEG00010003942 ENSRFEG00010003922 LNX2 (ENSRFEG00010003884) #31 MTIF3 (ENSRFEG00010003873) GTF3A (ENSRFEG00010003845) RASL11A (ENSRFEG00010003821) ENSRFEG00010003789 ##30 USP12 (ENSRFEG00010003775) #28 GPR12 (ENSRFEG00010003761) #27 ENSRFEG00010003754 WASF3 (ENSRFEG00010003718) #26 CDK8 (ENSRFEG00010003679) #25 RNF6 (ENSRFEG00010003644) #24 SHISA2 (ENSRFEG00010003626) #22 ENSRFEG00010003604 ATP8A2 (ENSRFEG00010003553) #23 NUP58 (ENSRFEG00010003461) MTMR6 (ENSRFEG00010003396) AMER2 (ENSRFEG00010003380) SPATA13 (ENSRFEG00010003339) ENSRFEG00010003289 ENSRFEG00010003258 MIPEP (ENSRFEG00010003206) TNFRSF19 (ENSRFEG00010003158) ENSRFEG00010003106 SGCG (ENSRFEG00010003054) PDS5B (ENSRFEG00010002968) KL (ENSRFEG00010002905) STARD13 (ENSRFEG00010002835) Microbat MODERN SPECIES 1035 WASF3 (ENSMLUG00000009096) #26 ENSMLUG00000009176 #25 ENSMLUG00000028522 RNF6 (ENSMLUG00000008227) #24 SHISA2 (ENSMLUG00000016357) #22 ENSMLUG00000025019 ATP8A2 (ENSMLUG00000016340) #23 NUP58 (ENSMLUG00000012785) MTMR6 (ENSMLUG00000012775) ENSMLUG00000015071 AMER2 (ENSMLUG00000011985) SPATA13 (ENSMLUG00000005602) ENSMLUG00000011479 CACNA1C (ENSMLUG00000014160) DCP1B (ENSMLUG00000002252) CACNA2D4 (ENSMLUG00000002221) LRTM2 (ENSMLUG00000002249) ENSMLUG00000002211 ENSMLUG00000030596 ENSMLUG00000010754 Megabat MODERN SPECIES 3005 SHISA2 (ENSPVAG00000000900) #22 ENSPVAG00000000899 ATP8A2 (ENSPVAG00000000898) #23 Equus ANCESTRAL SPECIES 26 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104.m.b #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A.i ENSGT00390000008171 ENSGT00500000045005 Horse MODERN SPECIES 8 CDX2 (ENSECAG00000027754) PDX1 (ENSECAG00000000679) GSX1 (ENSECAG00000035168) ENSECAG00000021095 #32 LNX2 (ENSECAG00000017219) #31 MTIF3 (ENSECAG00000016697) GTF3A (ENSECAG00000014803) RASL11A (ENSECAG00000012858) USP12 (ENSECAG00000006779) #28 ENSECAG00000045376 ENSECAG00000036907 GPR12 (ENSECAG00000059623) #27 WASF3 (ENSECAG00000000050) #26 CDK8 (ENSECAG00000015515) #25 RNF6 (ENSECAG00000013606) #24 SHISA2 (ENSECAG00000013207) #22 ATP8A2 (ENSECAG00000017268) #23 NUP58 (ENSECAG00000015901) ENSECAG00000014432 MTMR6 (ENSECAG00000000407) AMER2 (ENSECAG00000000275) SPATA13 (ENSECAG00000016372) ENSECAG00000016327 MIPEP (ENSECAG00000007908) ENSECAG00000051690 TNFRSF19 (ENSECAG00000001197) SACS (ENSECAG00000000755) SGCG (ENSECAG00000021576) ENSECAG00000004563 ENSECAG00000044709 ENSECAG00000005193 Donkey MODERN SPECIES 29 PDX1 (ENSEASG00005022482) GSX1 (ENSEASG00005022483) ENSEASG00005035501 #32 POLR1D (ENSEASG00005022487) LNX2 (ENSEASG00005022490) #31 MTIF3 (ENSEASG00005022492) ENSEASG00005022495 RASL11A (ENSEASG00005034471) ENSEASG00005022501 ##30 USP12 (ENSEASG00005022511) #28 GPR12 (ENSEASG00005035884) #27 WASF3 (ENSEASG00005022517) #26 CDK8 (ENSEASG00005022522) #25 RNF6 (ENSEASG00005022526) #24 ENSEASG00005025996 SHISA2 (ENSEASG00005022528) #22 ATP8A2 (ENSEASG00005022609) #23 NUP58 (ENSEASG00005022740) MTMR6 (ENSEASG00005022747) ENSEASG00005037603 ENSEASG00005022757 ENSEASG00005022758 MIPEP (ENSEASG00005022761) TNFRSF19 (ENSEASG00005022767) SACS (ENSEASG00005022774) SGCG (ENSEASG00005022775) FGF9 (ENSEASG00005036661) MICU2 (ENSEASG00005022784) ENSEASG00005024010 ENSEASG00005029343 MRPL57 (ENSEASG00005035883) Carnivora ANCESTRAL SPECIES 23 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Caniformia ANCESTRAL SPECIES 24 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Caniformia_b ANCESTRAL SPECIES 26 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 ENSGT00500000045005 Ursidae ANCESTRAL SPECIES 27 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 ENSGT00500000045005 Giant Panda MODERN SPECIES 17 GSX1 (ENSAMEG00000030161) ENSAMEG00000028974 #32 LNX2 (ENSAMEG00000015845) #31 MTIF3 (ENSAMEG00000015841) GTF3A (ENSAMEG00000015824) ENSAMEG00000029656 RASL11A (ENSAMEG00000015812) RPL21 (ENSAMEG00000031074) ##30 USP12 (ENSAMEG00000001863) #28 ENSAMEG00000024690 GPR12 (ENSAMEG00000019402) #27 WASF3 (ENSAMEG00000001835) #26 CDK8 (ENSAMEG00000001794) #25 RNF6 (ENSAMEG00000001786) #24 ENSAMEG00000001773 SHISA2 (ENSAMEG00000008511) #22 ATP8A2 (ENSAMEG00000008519) #23 NUP58 (ENSAMEG00000014220) ENSAMEG00000014195 ENSAMEG00000014191 ENSAMEG00000014159 ENSAMEG00000014127 TNFRSF19 (ENSAMEG00000014124) ENSAMEG00000028247 SACS (ENSAMEG00000014115) ENSAMEG00000014092 FGF9 (ENSAMEG00000030186) ENSAMEG00000010960 ENSAMEG00000010964 ENSAMEG00000014570 ENSAMEG00000014576 Ursus ANCESTRAL SPECIES ENSGT00940000157443 #22 American black bear MODERN SPECIES 3237 SHISA2 (ENSUAMG00000027674) #22 Mustelinae ANCESTRAL SPECIES 119 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 ENSGT00500000045005 American mink MODERN SPECIES 472 SHISA2 (ENSNVIG00000000718) #22 ATP8A2 (ENSNVIG00000000734) #23 ENSNVIG00000000818 Ferret MODERN SPECIES 493 ENSMPUG00000006540 SHISA2 (ENSMPUG00000006765) #22 ATP8A2 (ENSMPUG00000006772) #23 ENSMPUG00000006783 ENSMPUG00000006789 Canidae ANCESTRAL SPECIES 31 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Canis_lupus ANCESTRAL SPECIES 18 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00510000047137.i ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00390000018433.s.a.a.e.a ENSGT00950000183079.A.b.c.b Dingo MODERN SPECIES 304 ENSCAFG00020025301 LNX2 (ENSCAFG00020025302) #31 MTIF3 (ENSCAFG00020025304) ENSCAFG00020025306 ENSCAFG00020025308 ENSCAFG00020025311 RASL11A (ENSCAFG00020025312) ENSCAFG00020025313 ##30 USP12 (ENSCAFG00020025315) #28 GPR12 (ENSCAFG00020025316) #27 WASF3 (ENSCAFG00020025318) #26 CDK8 (ENSCAFG00020025319) #25 RNF6 (ENSCAFG00020025321) #24 ENSCAFG00020025325 ENSCAFG00020025328 SHISA2 (ENSCAFG00020025330) #22 ATP8A2 (ENSCAFG00020025331) #23 NUP58 (ENSCAFG00020025357) ENSCAFG00020025380 MTMR6 (ENSCAFG00020025382) AMER2 (ENSCAFG00020025387) ENSCAFG00020025389 ENSCAFG00020025393 ENSCAFG00020025398 ENSCAFG00020025402 MIPEP (ENSCAFG00020025404) ENSCAFG00020025406 TNFRSF19 (ENSCAFG00020025407) SACS (ENSCAFG00020025414) SGCG (ENSCAFG00020025426) FGF9 (ENSCAFG00020025429) Dog MODERN SPECIES 17 PDX1 (ENSCAFG00845025401) GSX1 (ENSCAFG00845025440) POLR1D (ENSCAFG00845025499) #32 LNX2 (ENSCAFG00845025569) #31 MTIF3 (ENSCAFG00845025671) GTF3A (ENSCAFG00845025723) RASL11A (ENSCAFG00845025821) RPL21 (ENSCAFG00845025858) ##30 USP12 (ENSCAFG00845025960) #28 ENSCAFG00845026031 GPR12 (ENSCAFG00845026068) #27 WASF3 (ENSCAFG00845026110) #26 CDK8 (ENSCAFG00845026285) #25 RNF6 (ENSCAFG00845026572) #24 ENSCAFG00845016412 SHISA2 (ENSCAFG00845016760) #22 ATP8A2 (ENSCAFG00845017077) #23 NUP58 (ENSCAFG00845017878) MTMR6 (ENSCAFG00845018288) ENSCAFG00845018481 ENSCAFG00845018528 ENSCAFG00845018627 ENSCAFG00845018801 ENSCAFG00845018985 ENSCAFG00845019187 MIPEP (ENSCAFG00845019295) ENSCAFG00845019573 TNFRSF19 (ENSCAFG00845019643) SACS (ENSCAFG00845020013) SGCG (ENSCAFG00845020198) FGF9 (ENSCAFG00845020297) Felidae ANCESTRAL SPECIES 23 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Cat MODERN SPECIES CDX2 (ENSFCAG00000026699) PDX1 (ENSFCAG00000034557) GSX1 (ENSFCAG00000026793) ENSFCAG00000030162 #32 LNX2 (ENSFCAG00000011821) #31 MTIF3 (ENSFCAG00000006985) GTF3A (ENSFCAG00000006982) RASL11A (ENSFCAG00000006749) ENSFCAG00000006750 ##30 USP12 (ENSFCAG00000026620) #28 GPR12 (ENSFCAG00000014524) #27 WASF3 (ENSFCAG00000009474) #26 CDK8 (ENSFCAG00000027073) #25 RNF6 (ENSFCAG00000011691) #24 ENSFCAG00000052429 SHISA2 (ENSFCAG00000043175) #22 ATP8A2 (ENSFCAG00000001581) #23 NUP58 (ENSFCAG00000001580) MTMR6 (ENSFCAG00000029234) AMER2 (ENSFCAG00000046446) SPATA13 (ENSFCAG00000001427) ENSFCAG00000009836 MIPEP (ENSFCAG00000009835) TNFRSF19 (ENSFCAG00000009834) SACS (ENSFCAG00000028276) SGCG (ENSFCAG00000033144) FGF9 (ENSFCAG00000030874) MICU2 (ENSFCAG00000005990) ZDHHC20 (ENSFCAG00000009375) MRPL57 (ENSFCAG00000024896) SKA3 (ENSFCAG00000027742) Panthera ANCESTRAL SPECIES 21 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ##30 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Panthera_a ANCESTRAL SPECIES 23 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ##30 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 lion MODERN SPECIES 1 CDX2 (ENSPLOG00000021193) PDX1 (ENSPLOG00000021216) GSX1 (ENSPLOG00000021227) ENSPLOG00000021249 #32 LNX2 (ENSPLOG00000021288) #31 MTIF3 (ENSPLOG00000021318) GTF3A (ENSPLOG00000021339) RASL11A (ENSPLOG00000021369) ENSPLOG00000021394 ##30 USP12 (ENSPLOG00000004064) #28 GPR12 (ENSPLOG00000004075) #27 WASF3 (ENSPLOG00000004088) #26 CDK8 (ENSPLOG00000004108) #25 RNF6 (ENSPLOG00000004130) #24 ENSPLOG00000004137 SHISA2 (ENSPLOG00000004147) #22 ATP8A2 (ENSPLOG00000004200) #23 NUP58 (ENSPLOG00000004223) MTMR6 (ENSPLOG00000004240) AMER2 (ENSPLOG00000004256) ENSPLOG00000004288 ENSPLOG00000004323 ENSPLOG00000004332 MIPEP (ENSPLOG00000004347) TNFRSF19 (ENSPLOG00000004370) SACS (ENSPLOG00000004382) SGCG (ENSPLOG00000004397) FGF9 (ENSPLOG00000004419) MICU2 (ENSPLOG00000004424) ZDHHC20 (ENSPLOG00000004448) MRPL57 (ENSPLOG00000004459) leopard MODERN SPECIES 14 PDX1 (ENSPPRG00000004534) GSX1 (ENSPPRG00000004333) POLR1D (ENSPPRG00000003381) LNX2 (ENSPPRG00000002783) #31 MTIF3 (ENSPPRG00000002497) GTF3A (ENSPPRG00000002368) RASL11A (ENSPPRG00000001350) ENSPPRG00000001012 ##30 USP12 (ENSPPRG00000000510) #28 GPR12 (ENSPPRG00000017596) #27 WASF3 (ENSPPRG00000022988) #26 CDK8 (ENSPPRG00000023432) #25 RNF6 (ENSPPRG00000024353) #24 ENSPPRG00000024460 ENSPPRG00000019469 SHISA2 (ENSPPRG00000013331) #22 ATP8A2 (ENSPPRG00000012882) #23 NUP58 (ENSPPRG00000010358) MTMR6 (ENSPPRG00000008213) SPATA13 (ENSPPRG00000006836) ENSPPRG00000004609 ENSPPRG00000003738 MIPEP (ENSPPRG00000003337) TNFRSF19 (ENSPPRG00000002581) SACS (ENSPPRG00000001238) SGCG (ENSPPRG00000000908) FGF9 (ENSPPRG00000000647) MICU2 (ENSPPRG00000000313) ZDHHC20 (ENSPPRG00000022714) MRPL57 (ENSPPRG00000016959) SKA3 (ENSPPRG00000023935) Tiger MODERN SPECIES 38 ENSPTIG00000014998 ENSPTIG00000016324 #33 GSX1 (ENSPTIG00000016369) ENSPTIG00000017320 #32 POLR1D (ENSPTIG00000018137) LNX2 (ENSPTIG00000018500) #31 MTIF3 (ENSPTIG00000018642) GTF3A (ENSPTIG00000018958) RASL11A (ENSPTIG00000019926) ENSPTIG00000020228 ##30 USP12 (ENSPTIG00000020368) #28 GPR12 (ENSPTIG00000005107) #27 WASF3 (ENSPTIG00000020649) #26 CDK8 (ENSPTIG00000021301) #25 RNF6 (ENSPTIG00000021628) #24 SHISA2 (ENSPTIG00000003520) #22 ATP8A2 (ENSPTIG00000005154) #23 NUP58 (ENSPTIG00000007201) MTMR6 (ENSPTIG00000009486) ENSPTIG00000011330 ENSPTIG00000012146 ENSPTIG00000012871 MIPEP (ENSPTIG00000013361) TNFRSF19 (ENSPTIG00000015132) SACS (ENSPTIG00000015806) SGCG (ENSPTIG00000016306) FGF9 (ENSPTIG00000016674) MICU2 (ENSPTIG00000017090) ZDHHC20 (ENSPTIG00000017721) MRPL57 (ENSPTIG00000005446) SKA3 (ENSPTIG00000019216) Artiodactyla ANCESTRAL SPECIES 21 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Suina ANCESTRAL SPECIES 29 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.a.b.a.a.b ##30 ENSGT00950000182922.a.a.a.b.a.b.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Pig MODERN SPECIES 2 PDX1 (ENSSSCG00000055811) GSX1 (ENSSSCG00000009313) POLR1D (ENSSSCG00000009310) LNX2 (ENSSSCG00000009308) #31 MTIF3 (ENSSSCG00000037313) GTF3A (ENSSSCG00000009305) RASL11A (ENSSSCG00000039890) ENSSSCG00000009303 ##30 USP12 (ENSSSCG00000009302) #28 GPR12 (ENSSSCG00000009301) #27 ENSSSCG00000042074 WASF3 (ENSSSCG00000009300) #26 CDK8 (ENSSSCG00000009298) #25 RNF6 (ENSSSCG00000024064) #24 ENSSSCG00000023771 SHISA2 (ENSSSCG00000030113) #22 ATP8A2 (ENSSSCG00000035421) #23 NUP58 (ENSSSCG00000035318) MTMR6 (ENSSSCG00000035119) AMER2 (ENSSSCG00000022678) ENSSSCG00000062603 ENSSSCG00000009293 ENSSSCG00000031308 ENSSSCG00000009285 MIPEP (ENSSSCG00000009290) TNFRSF19 (ENSSSCG00000009283) SACS (ENSSSCG00000035493) ENSSSCG00000009281 FGF9 (ENSSSCG00000009278) MICU2 (ENSSSCG00000024667) ZDHHC20 (ENSSSCG00000026744) Chacoan peccary MODERN SPECIES 216 POLR1D (ENSCWAG00000018355) LNX2 (ENSCWAG00000018415) #31 MTIF3 (ENSCWAG00000018433) GTF3A (ENSCWAG00000018454) ENSCWAG00000018472 RASL11A (ENSCWAG00000018481) RPL21 (ENSCWAG00000018513) ##30 USP12 (ENSCWAG00000018548) #28 ENSCWAG00000018581 GPR12 (ENSCWAG00000018600) #27 WASF3 (ENSCWAG00000018614) #26 CDK8 (ENSCWAG00000018646) #25 ENSCWAG00000018769 RNF6 (ENSCWAG00000018783) #24 ENSCWAG00000018820 SHISA2 (ENSCWAG00000019042) #22 ATP8A2 (ENSCWAG00000019075) #23 NUP58 (ENSCWAG00000019230) MTMR6 (ENSCWAG00000019277) AMER2 (ENSCWAG00000019308) ENSCWAG00000019330 ENSCWAG00000019383 MIPEP (ENSCWAG00000019435) TNFRSF19 (ENSCWAG00000019466) ENSCWAG00000019500 SACS (ENSCWAG00000019536) SGCG (ENSCWAG00000019585) ENSCWAG00000019612 FGF9 (ENSCWAG00000019626) MICU2 (ENSCWAG00000019646) ZDHHC20 (ENSCWAG00000019669) Artiodactyla_a ANCESTRAL SPECIES 22 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Camelidae ANCESTRAL SPECIES 14 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00550000075160 ENSGT00390000003643 #32 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000165049 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 ENSGT00500000045005 Arabian camel MODERN SPECIES 5 ENSCDRG00005003574 #34 ENSCDRG00005003530 PDX1 (ENSCDRG00005003496) GSX1 (ENSCDRG00005003464) POLR1D (ENSCDRG00005003401) LNX2 (ENSCDRG00005003360) #31 MTIF3 (ENSCDRG00005003341) GTF3A (ENSCDRG00005021807) RASL11A (ENSCDRG00005021802) ENSCDRG00005021795 ##30 USP12 (ENSCDRG00005021790) #28 GPR12 (ENSCDRG00005021787) #27 WASF3 (ENSCDRG00005021785) #26 CDK8 (ENSCDRG00005021779) #25 RNF6 (ENSCDRG00005021774) #24 SHISA2 (ENSCDRG00005021770) #22 ENSCDRG00005021765 ATP8A2 (ENSCDRG00005021744) #23 NUP58 (ENSCDRG00005021735) MTMR6 (ENSCDRG00005021731) ENSCDRG00005021728 ENSCDRG00005021719 ENSCDRG00005021711 MIPEP (ENSCDRG00005017932) TNFRSF19 (ENSCDRG00005017517) SACS (ENSCDRG00005017445) SGCG (ENSCDRG00005017380) MICU2 (ENSCDRG00005017265) ZDHHC20 (ENSCDRG00005017228) MRPL57 (ENSCDRG00005017207) SKA3 (ENSCDRG00005017159) Artiodactyla_b ANCESTRAL SPECIES 22 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Cetacea ANCESTRAL SPECIES 20 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Blue whale MODERN SPECIES 9 CDX2 (ENSBMSG00010014566) PDX1 (ENSBMSG00010014538) GSX1 (ENSBMSG00010014529) ENSBMSG00010014466 LNX2 (ENSBMSG00010014414) #31 MTIF3 (ENSBMSG00010014375) GTF3A (ENSBMSG00010014329) ENSBMSG00010014311 RASL11A (ENSBMSG00010014298) ENSBMSG00010014255 ##30 USP12 (ENSBMSG00010014225) #28 GPR12 (ENSBMSG00010014207) #27 WASF3 (ENSBMSG00010014112) #26 CDK8 (ENSBMSG00010014007) #25 RNF6 (ENSBMSG00010022445) #24 SHISA2 (ENSBMSG00010022444) #22 ATP8A2 (ENSBMSG00010022441) #23 NUP58 (ENSBMSG00010022436) MTMR6 (ENSBMSG00010022432) AMER2 (ENSBMSG00010022428) ENSBMSG00010022414 ENSBMSG00010022411 ENSBMSG00010022409 MIPEP (ENSBMSG00010022408) TNFRSF19 (ENSBMSG00010022406) SACS (ENSBMSG00010022402) SGCG (ENSBMSG00010022401) FGF9 (ENSBMSG00010022398) MICU2 (ENSBMSG00010022397) ZDHHC20 (ENSBMSG00010022394) MRPL57 (ENSBMSG00010022390) Odontoceti ANCESTRAL SPECIES 21 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Sperm whale MODERN SPECIES 4 CDX2 (ENSPCTG00005013676) PDX1 (ENSPCTG00005013620) GSX1 (ENSPCTG00005013569) POLR1D (ENSPCTG00005013390) LNX2 (ENSPCTG00005013292) #31 MTIF3 (ENSPCTG00005013236) GTF3A (ENSPCTG00005013180) RASL11A (ENSPCTG00005013101) RPL21 (ENSPCTG00005013013) ##30 USP12 (ENSPCTG00005012963) #28 ENSPCTG00005012908 GPR12 (ENSPCTG00005012894) #27 WASF3 (ENSPCTG00005012829) #26 CDK8 (ENSPCTG00005012757) #25 RNF6 (ENSPCTG00005012717) #24 SHISA2 (ENSPCTG00005012685) #22 ATP8A2 (ENSPCTG00005012320) #23 NUP58 (ENSPCTG00005012207) MTMR6 (ENSPCTG00005012116) ENSPCTG00005012083 ENSPCTG00005012034 ENSPCTG00005011655 ENSPCTG00005011588 ENSPCTG00005011481 MIPEP (ENSPCTG00005011317) TNFRSF19 (ENSPCTG00005011147) SACS (ENSPCTG00005011024) SGCG (ENSPCTG00005010884) FGF9 (ENSPCTG00005010827) MICU2 (ENSPCTG00005010765) ZDHHC20 (ENSPCTG00005010655) Odontoceti_a ANCESTRAL SPECIES 24 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Odontoceti_b ANCESTRAL SPECIES 21 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Monodontidae ANCESTRAL SPECIES 15 ENSGT00940000161261 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Beluga whale MODERN SPECIES 29 CDX2 (ENSDLEG00000014871) PDX1 (ENSDLEG00000014860) GSX1 (ENSDLEG00000014854) ENSDLEG00000014844 #32 POLR1D (ENSDLEG00000014833) LNX2 (ENSDLEG00000014818) #31 MTIF3 (ENSDLEG00000014809) GTF3A (ENSDLEG00000014795) RASL11A (ENSDLEG00000014782) RPL21 (ENSDLEG00000014757) ##30 USP12 (ENSDLEG00000014742) #28 GPR12 (ENSDLEG00000014734) #27 WASF3 (ENSDLEG00000014723) #26 CDK8 (ENSDLEG00000014684) #25 RNF6 (ENSDLEG00000014673) #24 SHISA2 (ENSDLEG00000014665) #22 ATP8A2 (ENSDLEG00000014596) #23 NUP58 (ENSDLEG00000014553) MTMR6 (ENSDLEG00000014452) ENSDLEG00000014440 AMER2 (ENSDLEG00000014434) SPATA13 (ENSDLEG00000014342) ENSDLEG00000014319 C1QTNF9 (ENSDLEG00000014301) MIPEP (ENSDLEG00000014236) TNFRSF19 (ENSDLEG00000014204) SACS (ENSDLEG00000014185) SGCG (ENSDLEG00000014170) FGF9 (ENSDLEG00000014138) MICU2 (ENSDLEG00000014082) ZDHHC20 (ENSDLEG00000014055) Narwhal MODERN SPECIES 315 CDX2 (ENSMMNG00015020842) PDX1 (ENSMMNG00015020863) GSX1 (ENSMMNG00015020877) ENSMMNG00015020896 #32 LNX2 (ENSMMNG00015020919) #31 MTIF3 (ENSMMNG00015020934) GTF3A (ENSMMNG00015020949) ENSMMNG00015020968 RASL11A (ENSMMNG00015020985) ENSMMNG00015020992 ##30 USP12 (ENSMMNG00015021025) #28 GPR12 (ENSMMNG00015021041) #27 WASF3 (ENSMMNG00015021063) #26 CDK8 (ENSMMNG00015021096) #25 RNF6 (ENSMMNG00015021148) #24 SHISA2 (ENSMMNG00015021160) #22 ATP8A2 (ENSMMNG00015021182) #23 NUP58 (ENSMMNG00015021248) MTMR6 (ENSMMNG00015021319) ENSMMNG00015021360 ENSMMNG00015021387 ENSMMNG00015021429 ENSMMNG00015021440 MIPEP (ENSMMNG00015021450) TNFRSF19 (ENSMMNG00015021475) SACS (ENSMMNG00015021494) SGCG (ENSMMNG00015021506) FGF9 (ENSMMNG00015021515) MICU2 (ENSMMNG00015021525) ZDHHC20 (ENSMMNG00015021541) MRPL57 (ENSMMNG00015021559) Vaquita MODERN SPECIES 9 CDX2 (ENSPSNG00000009587) PDX1 (ENSPSNG00000009545) GSX1 (ENSPSNG00000009508) ENSPSNG00000009434 LNX2 (ENSPSNG00000009360) #31 MTIF3 (ENSPSNG00000009318) GTF3A (ENSPSNG00000009270) RASL11A (ENSPSNG00000009220) ENSPSNG00000009136 ##30 USP12 (ENSPSNG00000009102) #28 GPR12 (ENSPSNG00000009076) #27 ENSPSNG00000009063 WASF3 (ENSPSNG00000009017) #26 CDK8 (ENSPSNG00000008895) #25 RNF6 (ENSPSNG00000008824) #24 SHISA2 (ENSPSNG00000008758) #22 ATP8A2 (ENSPSNG00000008542) #23 NUP58 (ENSPSNG00000008220) MTMR6 (ENSPSNG00000008125) AMER2 (ENSPSNG00000008085) ENSPSNG00000008063 SPATA13 (ENSPSNG00000007928) ENSPSNG00000007860 ENSPSNG00000007776 MIPEP (ENSPSNG00000007688) TNFRSF19 (ENSPSNG00000007600) SACS (ENSPSNG00000007520) SGCG (ENSPSNG00000007404) MICU2 (ENSPSNG00000007345) ZDHHC20 (ENSPSNG00000007200) MRPL57 (ENSPSNG00000007131) Dolphin MODERN SPECIES 340 SHISA2 (ENSTTRG00000012740) #22 ENSTTRG00000012739 ATP8A2 (ENSTTRG00000012736) #23 Pecora ANCESTRAL SPECIES 23 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Yarkand deer MODERN SPECIES 23 PDX1 (ENSCHYG00000018394) GSX1 (ENSCHYG00000018439) ENSCHYG00000018475 ENSCHYG00000018627 LNX2 (ENSCHYG00000018648) #31 MTIF3 (ENSCHYG00000018756) ENSCHYG00000018814 RASL11A (ENSCHYG00000019009) ENSCHYG00000019062 ##30 USP12 (ENSCHYG00000019156) #28 GPR12 (ENSCHYG00000019276) #27 WASF3 (ENSCHYG00000019331) #26 CDK8 (ENSCHYG00000019544) #25 RNF6 (ENSCHYG00000019809) #24 ENSCHYG00000019870 SHISA2 (ENSCHYG00000020018) #22 ATP8A2 (ENSCHYG00000020060) #23 NUP58 (ENSCHYG00000020356) MTMR6 (ENSCHYG00000020780) ENSCHYG00000020944 SPATA13 (ENSCHYG00000021003) ENSCHYG00000021480 ENSCHYG00000021607 MIPEP (ENSCHYG00000021677) TNFRSF19 (ENSCHYG00000022186) SACS (ENSCHYG00000022384) SGCG (ENSCHYG00000022497) ENSCHYG00000022553 MICU2 (ENSCHYG00000022600) ENSCHYG00000022747 ZDHHC20 (ENSCHYG00000022771) Percora_a ANCESTRAL SPECIES 25 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Siberian musk deer MODERN SPECIES 18 PDX1 (ENSMMSG00000002992) ENSMMSG00000003007 GSX1 (ENSMMSG00000003020) POLR1D (ENSMMSG00000003040) LNX2 (ENSMMSG00000003075) #31 MTIF3 (ENSMMSG00000003094) ENSMMSG00000003107 RASL11A (ENSMMSG00000003132) ENSMMSG00000003141 ##30 USP12 (ENSMMSG00000003167) #28 GPR12 (ENSMMSG00000003186) #27 WASF3 (ENSMMSG00000003196) #26 CDK8 (ENSMMSG00000003210) #25 RNF6 (ENSMMSG00000003228) #24 ENSMMSG00000003239 SHISA2 (ENSMMSG00000003265) #22 ATP8A2 (ENSMMSG00000003278) #23 NUP58 (ENSMMSG00000003344) MTMR6 (ENSMMSG00000003403) AMER2 (ENSMMSG00000003442) ENSMMSG00000003459 ENSMMSG00000003499 ENSMMSG00000003514 MIPEP (ENSMMSG00000003521) TNFRSF19 (ENSMMSG00000003566) ENSMMSG00000003601 ENSMMSG00000003618 SGCG (ENSMMSG00000003635) FGF9 (ENSMMSG00000003647) MICU2 (ENSMMSG00000003666) ZDHHC20 (ENSMMSG00000003719) Bovidae ANCESTRAL SPECIES 25 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Caprinae ANCESTRAL SPECIES 28 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643.k #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424.g ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171.ab Rambouillet Sheep MODERN SPECIES 1 GSX1 (ENSOARG00020011857) POLR1D (ENSOARG00020011900) LNX2 (ENSOARG00020012002) #31 MTIF3 (ENSOARG00020012058) ENSOARG00020012106 ENSOARG00020012160 RASL11A (ENSOARG00020012287) ENSOARG00020012335 ##30 ENSOARG00020012435 #25 USP12 (ENSOARG00020012488) #28 GPR12 (ENSOARG00020012619) #27 WASF3 (ENSOARG00020012645) #26 ENSOARG00020012817 #25 RNF6 (ENSOARG00020012931) #24 ENSOARG00020013656 SHISA2 (ENSOARG00020025858) #22 ATP8A2 (ENSOARG00020003135) #23 NUP58 (ENSOARG00020003279) MTMR6 (ENSOARG00020003588) AMER2 (ENSOARG00020003659) ENSOARG00020003885 ENSOARG00020003949 MIPEP (ENSOARG00020003971) TNFRSF19 (ENSOARG00020004054) SACS (ENSOARG00020004146) SGCG (ENSOARG00020004193) FGF9 (ENSOARG00020004253) MICU2 (ENSOARG00020004275) ZDHHC20 (ENSOARG00020004328) ENSOARG00020004438 ENSOARG00020004447 Goat DUPLICATION Goat MODERN SPECIES 3 PDX1 (ENSCHIG00000016212) GSX1 (ENSCHIG00000026107) ENSCHIG00000014902 #32 POLR1D (ENSCHIG00000021910) LNX2 (ENSCHIG00000024542) #31 ENSCHIG00000026996 ENSCHIG00000021040 RASL11A (ENSCHIG00000016902) RPL21 (ENSCHIG00000021720) ##30 USP12 (ENSCHIG00000006817) #28 GPR12 (ENSCHIG00000007944) #27 WASF3 (ENSCHIG00000017657) #26 CDK8 (ENSCHIG00000006655) #25 RNF6 (ENSCHIG00000020161) #24 ENSCHIG00000018640 SHISA2 (ENSCHIG00000015912) #22 ATP8A2 (ENSCHIG00000008913) #23 NUP58 (ENSCHIG00000009373) MTMR6 (ENSCHIG00000023894) AMER2 (ENSCHIG00000002328) SPATA13 (ENSCHIG00000023348) ENSCHIG00000019907 ENSCHIG00000014869 MIPEP (ENSCHIG00000021861) TNFRSF19 (ENSCHIG00000021901) SACS (ENSCHIG00000021941) SGCG (ENSCHIG00000010887) FGF9 (ENSCHIG00000020738) MICU2 (ENSCHIG00000019056) ENSCHIG00000013087 ZDHHC20 (ENSCHIG00000018849) Goat MODERN SPECIES 30 HPRT1 (ENSCHIG00000015745) PHF6 (ENSCHIG00000012946) PLAC1 (ENSCHIG00000019311) PABIR2 (ENSCHIG00000009443) ENSCHIG00000000449 MOSPD1 (ENSCHIG00000000414) ENSCHIG00000000379 ENSCHIG00000000348 HTATSF1 (ENSCHIG00000000312) BRS3 (ENSCHIG00000000280) ENSCHIG00000000243 ENSCHIG00000018808 CD40LG (ENSCHIG00000000168) ARHGEF6 (ENSCHIG00000000132) ENSCHIG00000000095 ENSCHIG00000000060 #22 ENSCHIG00000009593 ENSCHIG00000007648 ZIC3 (ENSCHIG00000021756) ENSCHIG00000018935 FGF13 (ENSCHIG00000016286) F9 (ENSCHIG00000013903) MCF2 (ENSCHIG00000009737) ATP11C (ENSCHIG00000009648) ENSCHIG00000000404 SOX3 (ENSCHIG00000000368) ENSCHIG00000000337 LDOC1 (ENSCHIG00000019266) ENSCHIG00000000231 ENSCHIG00000000195 ENSCHIG00000018613 Bovinae ANCESTRAL SPECIES 29 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.a ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 American bison MODERN SPECIES 3213 PDX1 (ENSBBBG00000001839) GSX1 (ENSBBBG00000001841) ENSBBBG00000012613 #32 POLR1D (ENSBBBG00000012618) LNX2 (ENSBBBG00000012639) #31 ENSBBBG00000012643 GTF3A (ENSBBBG00000012669) RASL11A (ENSBBBG00000007545) ENSBBBG00000012692 ##30 USP12 (ENSBBBG00000002455) #28 GPR12 (ENSBBBG00000012732) #27 WASF3 (ENSBBBG00000002463) #26 CDK8 (ENSBBBG00000001797) #25 RNF6 (ENSBBBG00000012758) #24 ENSBBBG00000012975 SHISA2 (ENSBBBG00000013012) #22 ATP8A2 (ENSBBBG00000002606) #23 NUP58 (ENSBBBG00000013067) MTMR6 (ENSBBBG00000002619) ENSBBBG00000013118 ENSBBBG00000008445 ENSBBBG00000013148 MIPEP (ENSBBBG00000013170) TNFRSF19 (ENSBBBG00000002662) SACS (ENSBBBG00000013206) SGCG (ENSBBBG00000013218) FGF9 (ENSBBBG00000006877) MICU2 (ENSBBBG00000002673) ZDHHC20 (ENSBBBG00000013302) MRPL57 (ENSBBBG00000013311) SKA3 (ENSBBBG00000013325) Bos ANCESTRAL SPECIES 28 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Bos_b ANCESTRAL SPECIES 33 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.a ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00730000111659 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Hybrid Bos Indicus MODERN SPECIES 3 PDX1 (ENSBIXG00005005368) GSX1 (ENSBIXG00005009693) POLR1D (ENSBIXG00005009666) LNX2 (ENSBIXG00005009616) #31 ENSBIXG00005009581 MTIF3 (ENSBIXG00005000533) RASL11A (ENSBIXG00005009524) ENSBIXG00005009506 ##30 USP12 (ENSBIXG00005000510) #28 GPR12 (ENSBIXG00005005366) #27 WASF3 (ENSBIXG00005009436) #26 CDK8 (ENSBIXG00005009401) #25 RNF6 (ENSBIXG00005009338) #24 ENSBIXG00005009305 ENSBIXG00005009251 SHISA2 (ENSBIXG00005008806) #22 ATP8A2 (ENSBIXG00005008727) #23 NUP58 (ENSBIXG00005008603) MTMR6 (ENSBIXG00005008563) AMER2 (ENSBIXG00005008541) SPATA13 (ENSBIXG00005008506) ENSBIXG00005005901 ENSBIXG00005006188 MIPEP (ENSBIXG00005008422) TNFRSF19 (ENSBIXG00005008407) SACS (ENSBIXG00005008362) SGCG (ENSBIXG00005000156) FGF9 (ENSBIXG00005000140) ZDHHC20 (ENSBIXG00005008261) MICU2 (ENSBIXG00005008185) MRPL57 (ENSBIXG00005008171) Cow MODERN SPECIES 3 GSX1 (ENSBTAG00000009166) ENSBTAG00000048386 #32 POLR1D (ENSBTAG00000008642) LNX2 (ENSBTAG00000015614) #31 MTIF3 (ENSBTAG00000020530) GTF3A (ENSBTAG00000012600) RASL11A (ENSBTAG00000005244) RPL21 (ENSBTAG00000001648) ##30 USP12 (ENSBTAG00000017179) #28 GPR12 (ENSBTAG00000010769) #27 WASF3 (ENSBTAG00000014619) #26 ENSBTAG00000049013 CDK8 (ENSBTAG00000016737) #25 RNF6 (ENSBTAG00000005318) #24 ENSBTAG00000025428 SHISA2 (ENSBTAG00000018214) #22 ATP8A2 (ENSBTAG00000019529) #23 NUP58 (ENSBTAG00000015225) MTMR6 (ENSBTAG00000003116) AMER2 (ENSBTAG00000048360) SPATA13 (ENSBTAG00000019545) C1QTNF9 (ENSBTAG00000053310) ENSBTAG00000051537 MIPEP (ENSBTAG00000008888) TNFRSF19 (ENSBTAG00000018300) SACS (ENSBTAG00000001867) SGCG (ENSBTAG00000001865) FGF9 (ENSBTAG00000048237) MICU2 (ENSBTAG00000015943) ENSBTAG00000052696 ZDHHC20 (ENSBTAG00000006177) Bos_a ANCESTRAL SPECIES 19 ENSGT00940000161261 ENSGT00940000162542 ENSGT00390000003643 #32 ENSGT00940000154361.A ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b.f.e.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Domestic yak MODERN SPECIES 6 GSX1 (ENSBGRG00000005224) ENSBGRG00000005177 #32 LNX2 (ENSBGRG00000005122) #31 MTIF3 (ENSBGRG00000005098) GTF3A (ENSBGRG00000004973) RASL11A (ENSBGRG00000004923) ENSBGRG00000004884 ##30 USP12 (ENSBGRG00000004775) #28 ENSBGRG00000004746 ENSBGRG00000004721 GPR12 (ENSBGRG00000004706) #27 WASF3 (ENSBGRG00000004578) #26 CDK8 (ENSBGRG00000004492) #25 RNF6 (ENSBGRG00000004463) #24 ENSBGRG00000003811 SHISA2 (ENSBGRG00000017087) #22 ENSBGRG00000017047 ENSBGRG00000017006 ENSBGRG00000016937 ENSBGRG00000016897 ENSBGRG00000016865 ENSBGRG00000016808 ATP8A2 (ENSBGRG00000016115) #23 NUP58 (ENSBGRG00000015980) MTMR6 (ENSBGRG00000015826) AMER2 (ENSBGRG00000015755) ENSBGRG00000015382 ENSBGRG00000015156 ENSBGRG00000015093 MIPEP (ENSBGRG00000014831) TNFRSF19 (ENSBGRG00000014716) Wild yak MODERN SPECIES 1373 LNX2 (ENSBMUG00000023255) #31 MTIF3 (ENSBMUG00000023261) GTF3A (ENSBMUG00000023275) RASL11A (ENSBMUG00000023279) ENSBMUG00000023292 ##30 USP12 (ENSBMUG00000023334) #28 GPR12 (ENSBMUG00000023347) #27 WASF3 (ENSBMUG00000023380) #26 CDK8 (ENSBMUG00000023385) #25 RNF6 (ENSBMUG00000023393) #24 ENSBMUG00000023532 SHISA2 (ENSBMUG00000023607) #22 Atlantogenata ANCESTRAL SPECIES 27 ENSGT00940000162542 ENSGT00940000154361.A ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 Xenarthra ANCESTRAL SPECIES 269 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00940000154103.a ENSGT00730000111659 ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 Sloth MODERN SPECIES 2554 ENSCHOG00000002743 #22 ATP8A2 (ENSCHOG00000002734) #23 Armadillo MODERN SPECIES 975 CDK8 (ENSDNOG00000014148) #25 ENSDNOG00000032158 #24 ENSDNOG00000034737 ENSDNOG00000036318 SHISA2 (ENSDNOG00000047800) #22 ATP8A2 (ENSDNOG00000003769) #23 ENSDNOG00000014496 MTMR6 (ENSDNOG00000014471) ENSDNOG00000007898 AMER2 (ENSDNOG00000042162) ENSDNOG00000042786 SPATA13 (ENSDNOG00000049382) ENSDNOG00000049443 ENSDNOG00000039338 ENSDNOG00000048266 MIPEP (ENSDNOG00000002105) TNFRSF19 (ENSDNOG00000042274) ENSDNOG00000036775 SACS (ENSDNOG00000035220) SGCG (ENSDNOG00000039204) Afrotheria ANCESTRAL SPECIES 89 ENSGT00940000160575 ENSGT00940000161261 ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 ENSGT00500000045005 Afrotheria_a ANCESTRAL SPECIES 90 ENSGT00940000160575 ENSGT00940000161261 ENSGT00390000003643 #32 ENSGT00550000075160 ENSGT00940000158381 #31 ENSGT00390000014424 ENSGT00940000155647 ENSGT00940000161208 ENSGT00950000182922.a.a.b ##30 ENSGT00940000153284.a #28 ENSGT01060000248564.b.a.b.a #27 ENSGT00950000182962.a.a #26 ENSGT00940000157104 #25 ENSGT00940000158530 #24 ENSGT00940000165049 ENSGT00940000157443 #22 ENSGT00940000157332 #23 ENSGT00730000111111 ENSGT00940000158055 ENSGT00530000063529.A ENSGT00940000154103.a ENSGT00940000154936.qb ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00390000008171 ENSGT00500000045005 Elephant MODERN SPECIES 294 CDX2 (ENSLAFG00000030146) ENSLAFG00000022071 #32 POLR1D (ENSLAFG00000032290) LNX2 (ENSLAFG00000015044) #31 MTIF3 (ENSLAFG00000015496) GTF3A (ENSLAFG00000027315) RASL11A (ENSLAFG00000003673) ENSLAFG00000003677 ##30 USP12 (ENSLAFG00000007202) #28 ENSLAFG00000028761 GPR12 (ENSLAFG00000014464) #27 WASF3 (ENSLAFG00000018395) #26 CDK8 (ENSLAFG00000006771) #25 RNF6 (ENSLAFG00000029161) #24 ENSLAFG00000030917 SHISA2 (ENSLAFG00000004541) #22 ATP8A2 (ENSLAFG00000004530) #23 NUP58 (ENSLAFG00000011815) MTMR6 (ENSLAFG00000008869) AMER2 (ENSLAFG00000001390) ENSLAFG00000029011 ENSLAFG00000006056 ENSLAFG00000028123 MIPEP (ENSLAFG00000014265) TNFRSF19 (ENSLAFG00000009607) SACS (ENSLAFG00000007674) SGCG (ENSLAFG00000006276) FGF9 (ENSLAFG00000017616) MICU2 (ENSLAFG00000009343) ZDHHC20 (ENSLAFG00000006112) MRPL57 (ENSLAFG00000016751) Hyrax MODERN SPECIES 11698 SHISA2 (ENSPCAG00000014313) #22 Tenrec MODERN SPECIES 15695 ENSETEG00000007403 #22