Sarcopterygii	ANCESTRAL SPECIES	571														ENSGT00940000166053	ENSGT00940000166766	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24
Tetrapoda	ANCESTRAL SPECIES	69			ENSGT00940000164006	ENSGT00950000183024.a.a.a	ENSGT00390000007539	ENSGT00390000002089.a.a.b	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00940000156646	ENSGT00950000182980.a.b.b.a.b	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00940000166053	ENSGT00940000166766	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255 #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00510000048574 #34	ENSGT00390000017869 #33	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137
Amniota	ANCESTRAL SPECIES	56	ENSGT00940000159139	ENSGT00390000008374	ENSGT00390000002615	ENSGT00510000049875	ENSGT00940000156457	ENSGT00940000156484.a	ENSGT00390000007539	ENSGT01060000249020	ENSGT00940000173994	ENSGT00940000162660.b.e.b	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
Mammalia	ANCESTRAL SPECIES	9	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000157004.a.b	ENSGT00940000161499 #13	ENSGT00940000162660.b.e.b	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000166766	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00940000156048.a.a	ENSGT00390000006255.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37
Theria	ANCESTRAL SPECIES	8	ENSGT00390000007539	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161499 #13	ENSGT00940000162660.b.e.b	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00940000156048.a.a	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000162660.b.e.b	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Primates	ANCESTRAL SPECIES		ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Haplorrhini	ANCESTRAL SPECIES		ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d.a ##19	ENSGT00940000157482.d.b #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Gorilla	MODERN SPECIES	2	SLC22A24 (ENSGGOG00000005570) #7	SLC22A25 (ENSGGOG00000007793) #8	CSNK1G2 (ENSGGOG00000007714) #9	SLC22A10 (ENSGGOG00000014919) #10	SLC22A9 (ENSGGOG00000003608) #11	PLAAT5 (ENSGGOG00000000970) #12	LGALS12 (ENSGGOG00000000279) #13	PLAAT4 (ENSGGOG00000000281) #14	PLAAT2 (ENSGGOG00000000282) #15	PLAAT3 (ENSGGOG00000001944) #16	ATL3 (ENSGGOG00000009860) #17	ENSGGOG00000037187 #18	RTN3 (ENSGGOG00000009872) #19	ZFTA (ENSGGOG00000006043) #20	SPINDOC (ENSGGOG00000010130) #21	MARK2 (ENSGGOG00000017093) #22	RCOR2 (ENSGGOG00000016070) #23	NAA40 (ENSGGOG00000023645) #24	COX8A (ENSGGOG00000006870) #25	ENSGGOG00000012111 #26	MACROD1 (ENSGGOG00000012120) #27	FLRT1 (ENSGGOG00000023646) #28	ENSGGOG00000040851 #29	STIP1 (ENSGGOG00000012132) #30	FERMT3 (ENSGGOG00000012149) #31	TRPT1 (ENSGGOG00000012163) #32	NUDT22 (ENSGGOG00000012174) #33	DNAJC4 (ENSGGOG00000012182) #34	ENSGGOG00000012193 #35	FKBP2 (ENSGGOG00000012201) #36	ENSGGOG00000012211 #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d.b #19	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d.a ##19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Human	MODERN SPECIES	2	SLC22A6 (ENSG00000197901)	SLC22A8 (ENSG00000149452)	SLC22A24 (ENSG00000197658) #7	SLC22A25 (ENSG00000196600) #8	SLC22A10 (ENSG00000184999) #10	SLC22A9 (ENSG00000149742) #11	PLAAT5 (ENSG00000168004) #12	LGALS12 (ENSG00000133317) #13	PLAAT4 (ENSG00000133321) #14	PLAAT2 (ENSG00000133328) #15	PLAAT3 (ENSG00000176485) #16	ATL3 (ENSG00000184743) #17	RTN3 (ENSG00000133318) #19	ZFTA (ENSG00000188070) #20	SPINDOC (ENSG00000168005) #21	MARK2 (ENSG00000072518) #22	RCOR2 (ENSG00000167771) #23	NAA40 (ENSG00000110583) #24	COX8A (ENSG00000176340) #25	OTUB1 (ENSG00000167770) #26	MACROD1 (ENSG00000133315) #27	FLRT1 (ENSG00000126500) #28	STIP1 (ENSG00000168439) #30	FERMT3 (ENSG00000149781) #31	TRPT1 (ENSG00000149743) #32	NUDT22 (ENSG00000149761) #33	DNAJC4 (ENSG00000110011) #34	VEGFB (ENSG00000173511) #35	FKBP2 (ENSG00000173486) #36	ENSG00000286264	PPP1R14B (ENSG00000173457) ##37
Pan	ANCESTRAL SPECIES	1	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d.a ##19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37	ENSGT00940000160539	ENSGT00390000010740
Bonobo	MODERN SPECIES	2	SLC22A8 (ENSPPAG00000041453)	SLC22A24 (ENSPPAG00000035098) #7	ENSPPAG00000042818	SLC22A25 (ENSPPAG00000039130) #8	SLC22A10 (ENSPPAG00000040455) #10	SLC22A9 (ENSPPAG00000029821) #11	PLAAT5 (ENSPPAG00000040450) #12	LGALS12 (ENSPPAG00000042349) #13	PLAAT4 (ENSPPAG00000033745) #14	PLAAT2 (ENSPPAG00000034354) #15	PLAAT3 (ENSPPAG00000038739) #16	ATL3 (ENSPPAG00000000239) #17	ENSPPAG00000043354 #18	RTN3 (ENSPPAG00000030987) ##19	SPINDOC (ENSPPAG00000031069) #21	MARK2 (ENSPPAG00000032968) #22	RCOR2 (ENSPPAG00000042105) #23	NAA40 (ENSPPAG00000030104) #24	COX8A (ENSPPAG00000028187) #25	ENSPPAG00000004371 #26	FLRT1 (ENSPPAG00000021929) #28	ENSPPAG00000018079	ENSPPAG00000030996 #27	STIP1 (ENSPPAG00000042552) #30	FERMT3 (ENSPPAG00000034923) #31	NUDT22 (ENSPPAG00000036351) #33	TRPT1 (ENSPPAG00000027600) #32	DNAJC4 (ENSPPAG00000011209) #34	VEGFB (ENSPPAG00000038720) #35	FKBP2 (ENSPPAG00000036913) #36	ENSPPAG00000022401 ##37
Chimpanzee	MODERN SPECIES	2	SLC22A8 (ENSPTRG00000003796)	SLC22A24 (ENSPTRG00000003797) #7	SLC22A25 (ENSPTRG00000024251) #8	SLC22A10 (ENSPTRG00000003799) #10	SLC22A9 (ENSPTRG00000003800) #11	PLAAT5 (ENSPTRG00000003801) #12	LGALS12 (ENSPTRG00000003803) #13	PLAAT4 (ENSPTRG00000003804) #14	PLAAT2 (ENSPTRG00000003805) #15	PLAAT3 (ENSPTRG00000003806) #16	ATL3 (ENSPTRG00000003807) #17	ENSPTRG00000043962 #18	RTN3 (ENSPTRG00000003809) ##19	ZFTA (ENSPTRG00000045157) #20	SPINDOC (ENSPTRG00000003812) #21	MARK2 (ENSPTRG00000043914) #22	RCOR2 (ENSPTRG00000003814) #23	NAA40 (ENSPTRG00000003815) #24	COX8A (ENSPTRG00000003816) #25	OTUB1 (ENSPTRG00000003817) #26	MACROD1 (ENSPTRG00000003818) #27	FLRT1 (ENSPTRG00000028604) #28	ENSPTRG00000052372	ENSPTRG00000043258 #29	STIP1 (ENSPTRG00000003820) #30	FERMT3 (ENSPTRG00000024042) #31	TRPT1 (ENSPTRG00000003822) #32	NUDT22 (ENSPTRG00000003823) #33	DNAJC4 (ENSPTRG00000003824) #34	VEGFB (ENSPTRG00000003825) #35	FKBP2 (ENSPTRG00000003826) #36
Orangutan	MODERN SPECIES	2	SLC22A6 (ENSPPYG00000003138)	SLC22A8 (ENSPPYG00000003137)	SLC22A24 (ENSPPYG00000003136) #7	SLC22A25 (ENSPPYG00000003135) #8	SLC22A10 (ENSPPYG00000038210) #10	SLC22A9 (ENSPPYG00000003134) #11	PLAAT5 (ENSPPYG00000003133) #12	LGALS12 (ENSPPYG00000003132) #13	ENSPPYG00000003131 #14	PLAAT2 (ENSPPYG00000003130) #15	PLAAT3 (ENSPPYG00000031710) #16	ATL3 (ENSPPYG00000003129) #17	RTN3 (ENSPPYG00000003128) #19	ZFTA (ENSPPYG00000003127) #20	SPINDOC (ENSPPYG00000003126) #21	MARK2 (ENSPPYG00000003125) #22	RCOR2 (ENSPPYG00000003124) #23	NAA40 (ENSPPYG00000003123) #24	COX8A (ENSPPYG00000003122) #25	OTUB1 (ENSPPYG00000003121) #26	FLRT1 (ENSPPYG00000003120) #28	ENSPPYG00000037537	ENSPPYG00000003119 #27	STIP1 (ENSPPYG00000003118) #30	FERMT3 (ENSPPYG00000003117) #31	TRPT1 (ENSPPYG00000003116) #32	ENSPPYG00000003115 #33	DNAJC4 (ENSPPYG00000003114) #34	VEGFB (ENSPPYG00000003113) #35	FKBP2 (ENSPPYG00000039319) #36	ENSPPYG00000035813 ##37
Gibbon	MODERN SPECIES	19	SLC22A6 (ENSNLEG00000004394)	SLC22A8 (ENSNLEG00000004442)	SLC22A24 (ENSNLEG00000034554) #7	SLC22A25 (ENSNLEG00000004474) #8	SLC22A10 (ENSNLEG00000004483) #10	PLAAT5 (ENSNLEG00000004486) #12	LGALS12 (ENSNLEG00000004499) #13	ENSNLEG00000035013 #14	PLAAT2 (ENSNLEG00000004549) #15	PLAAT3 (ENSNLEG00000004552) #16	ENSNLEG00000004565 #17	ENSNLEG00000030866 #18	RTN3 (ENSNLEG00000004594) #19	ZFTA (ENSNLEG00000004648) #20	ENSNLEG00000004652 #21	MARK2 (ENSNLEG00000004656) #22	RCOR2 (ENSNLEG00000004721) #23	NAA40 (ENSNLEG00000029469) #24	OTUB1 (ENSNLEG00000004735) #26	ENSNLEG00000004776 #28	ENSNLEG00000034495 #29	STIP1 (ENSNLEG00000004777) #30	ENSNLEG00000004819 #31	ENSNLEG00000033525 #32	NUDT22 (ENSNLEG00000004838) #33	DNAJC4 (ENSNLEG00000004852) #34	VEGFB (ENSNLEG00000004864) #35	FKBP2 (ENSNLEG00000004877) #36	PPP1R14B (ENSNLEG00000004890) ##37	PLCB3 (ENSNLEG00000004895)	ENSNLEG00000028113
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Rhinopithecus	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37	ENSGT00940000160539
Golden snub-nosed monkey	MODERN SPECIES	689	ENSRROG00000018171	SLC22A6 (ENSRROG00000028501)	SLC22A8 (ENSRROG00000032433)	SLC22A9 (ENSRROG00000044160) #11	PLAAT5 (ENSRROG00000020148) #12	LGALS12 (ENSRROG00000041051) #13	PLAAT4 (ENSRROG00000043528) #14	PLAAT2 (ENSRROG00000043068) #15	ENSRROG00000003500	PLAAT3 (ENSRROG00000043275) #16	ATL3 (ENSRROG00000036759) #17	ENSRROG00000045513 #18	RTN3 (ENSRROG00000037363) #19	ZFTA (ENSRROG00000004175) #20	SPINDOC (ENSRROG00000013487) #21	MARK2 (ENSRROG00000030516) #22	RCOR2 (ENSRROG00000037726) #23	NAA40 (ENSRROG00000040534) #24	COX8A (ENSRROG00000035722) #25	OTUB1 (ENSRROG00000041865) #26	MACROD1 (ENSRROG00000045162) #27	FLRT1 (ENSRROG00000021859) #28	STIP1 (ENSRROG00000031122) #30	FERMT3 (ENSRROG00000018258) #31	TRPT1 (ENSRROG00000044905) #32	NUDT22 (ENSRROG00000029876) #33	DNAJC4 (ENSRROG00000041457) #34	VEGFB (ENSRROG00000000444) #35	FKBP2 (ENSRROG00000039908) #36	PPP1R14B (ENSRROG00000044431) ##37	PLCB3 (ENSRROG00000033756)
Black snub-nosed monkey	MODERN SPECIES	708	ENSRBIG00000018377	SLC22A6 (ENSRBIG00000039106)	SLC22A8 (ENSRBIG00000040948)	SLC22A9 (ENSRBIG00000034031) #11	PLAAT5 (ENSRBIG00000035439) #12	LGALS12 (ENSRBIG00000034955) #13	PLAAT4 (ENSRBIG00000042937) #14	PLAAT2 (ENSRBIG00000042420) #15	ENSRBIG00000029167	PLAAT3 (ENSRBIG00000032126) #16	ATL3 (ENSRBIG00000028494) #17	ENSRBIG00000044188 #18	RTN3 (ENSRBIG00000032715) #19	ZFTA (ENSRBIG00000027331) #20	SPINDOC (ENSRBIG00000033800) #21	MARK2 (ENSRBIG00000022423) #22	NAA40 (ENSRBIG00000031380) #24
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37	ENSGT00940000160539
Vervet Monkey	MODERN SPECIES		STX5 (ENSCSAG00000006748)	WDR74 (ENSCSAG00000006751)	SLC3A2 (ENSCSAG00000006769)	CHRM1 (ENSCSAG00000019175)	SLC22A6 (ENSCSAG00000006803)	SLC22A8 (ENSCSAG00000006811)	PLAAT5 (ENSCSAG00000006826) #12	LGALS12 (ENSCSAG00000006834) #13	PLAAT4 (ENSCSAG00000006839) #14	PLAAT2 (ENSCSAG00000006843) #15	PLAAT3 (ENSCSAG00000006852) #16	ATL3 (ENSCSAG00000006859) #17	ENSCSAG00000006861 #19	ZFTA (ENSCSAG00000006866) #20	SPINDOC (ENSCSAG00000006870) #21	MARK2 (ENSCSAG00000006877) #22	RCOR2 (ENSCSAG00000006881) #23	NAA40 (ENSCSAG00000006886) #24	COX8A (ENSCSAG00000006887) #25	OTUB1 (ENSCSAG00000006902) #26	FLRT1 (ENSCSAG00000019174) #28	MACROD1 (ENSCSAG00000006912) #27	STIP1 (ENSCSAG00000006931) #30	TRPT1 (ENSCSAG00000006952) #32	FERMT3 (ENSCSAG00000006957) #31	NUDT22 (ENSCSAG00000006966) #33	DNAJC4 (ENSCSAG00000006977) #34	VEGFB (ENSCSAG00000006993) #35	FKBP2 (ENSCSAG00000007000) #36	PPP1R14B (ENSCSAG00000007003) ##37	PLCB3 (ENSCSAG00000007117)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000161450 #27	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Pig-tailed macaque	MODERN SPECIES	433	SLC3A2 (ENSMNEG00000044452)	CHRM1 (ENSMNEG00000010440)	ENSMNEG00000025380	SLC22A6 (ENSMNEG00000043253)	SLC22A8 (ENSMNEG00000038818)	PLAAT5 (ENSMNEG00000034274) #12	LGALS12 (ENSMNEG00000040245) #13	PLAAT4 (ENSMNEG00000045290) #14	PLAAT2 (ENSMNEG00000038914) #15	PLAAT3 (ENSMNEG00000039570) #16	ATL3 (ENSMNEG00000034634) #17	ENSMNEG00000033797 #18	RTN3 (ENSMNEG00000044489) #19	ZFTA (ENSMNEG00000044610) #20	SPINDOC (ENSMNEG00000031960) #21	MARK2 (ENSMNEG00000045327) #22	RCOR2 (ENSMNEG00000038097) #23	NAA40 (ENSMNEG00000032942) #24	COX8A (ENSMNEG00000041613) #25	OTUB1 (ENSMNEG00000041958) #26	MACROD1 (ENSMNEG00000034860) #27	FLRT1 (ENSMNEG00000017975) #28	ENSMNEG00000020968 #29	STIP1 (ENSMNEG00000041943) #30	FERMT3 (ENSMNEG00000034532) #31	TRPT1 (ENSMNEG00000033348) #32	NUDT22 (ENSMNEG00000035263) #33	DNAJC4 (ENSMNEG00000041418) #34	VEGFB (ENSMNEG00000044681) #35	FKBP2 (ENSMNEG00000025167) #36	ENSMNEG00000045463 #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00960000190678	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000163505.a.a.a.b.a.b.b.b.a.a	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000161450 #27	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Crab-eating macaque	MODERN SPECIES	5	SLC3A2 (ENSMFAG00000032262)	ENSMFAG00000028626	ENSMFAG00000048955	SLC22A6 (ENSMFAG00000003484)	SLC22A8 (ENSMFAG00000030409)	PLAAT5 (ENSMFAG00000039225) #12	LGALS12 (ENSMFAG00000041888) #13	PLAAT4 (ENSMFAG00000035178) #14	PLAAT3 (ENSMFAG00000032359) #16	ENSMFAG00000053940	ATL3 (ENSMFAG00000035680) #17	RTN3 (ENSMFAG00000030265) #19	ENSMFAG00000059182	SPINDOC (ENSMFAG00000002160) #21	ENSMFAG00000063584	MARK2 (ENSMFAG00000032452) #22	RCOR2 (ENSMFAG00000039149) #23	NAA40 (ENSMFAG00000034118) #24	COX8A (ENSMFAG00000001343) #25	OTUB1 (ENSMFAG00000033654) #26	FLRT1 (ENSMFAG00000025476) #28	ENSMFAG00000058459 #29	MACROD1 (ENSMFAG00000000889) #27	STIP1 (ENSMFAG00000045746) #30	FERMT3 (ENSMFAG00000001178) #31	TRPT1 (ENSMFAG00000036828) #32	NUDT22 (ENSMFAG00000000939) #33	DNAJC4 (ENSMFAG00000036941) #34	VEGFB (ENSMFAG00000044556) #35	PPP1R14B (ENSMFAG00000028668) ##37	PLCB3 (ENSMFAG00000044872)
Rhesus	MODERN SPECIES	5	WDR74 (ENSMMUG00000018779)	ENSMMUG00000064232	SLC3A2 (ENSMMUG00000020354)	CHRM1 (ENSMMUG00000017292)	SLC22A6 (ENSMMUG00000016227)	SLC22A8 (ENSMMUG00000016225)	PLAAT5 (ENSMMUG00000018316) #12	LGALS12 (ENSMMUG00000018304) #13	PLAAT4 (ENSMMUG00000045105) #14	PLAAT3 (ENSMMUG00000005775) #15	ATL3 (ENSMMUG00000005776) #17	RTN3 (ENSMMUG00000015876) #19	ZFTA (ENSMMUG00000047347) #20	SPINDOC (ENSMMUG00000018152) #21	ENSMMUG00000059969	MARK2 (ENSMMUG00000014131) #22	RCOR2 (ENSMMUG00000014133) #23	ENSMMUG00000052569	NAA40 (ENSMMUG00000018632) #24	COX8A (ENSMMUG00000053930) #25	ENSMMUG00000000478	FLRT1 (ENSMMUG00000000482) #28	MACROD1 (ENSMMUG00000056751) #27	STIP1 (ENSMMUG00000012953) #30	FERMT3 (ENSMMUG00000012939) #31	TRPT1 (ENSMMUG00000012940) #32	NUDT22 (ENSMMUG00000012941) #33	DNAJC4 (ENSMMUG00000012942) #34	VEGFB (ENSMMUG00000012944) #35	FKBP2 (ENSMMUG00000048072) #36	ENSMMUG00000037977 ##37
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j ##37
Olive baboon	MODERN SPECIES	3	STX5 (ENSPANG00000019343)	WDR74 (ENSPANG00000013148)	SLC3A2 (ENSPANG00000012315)	CHRM1 (ENSPANG00000021843)	SLC22A6 (ENSPANG00000013726)	SLC22A8 (ENSPANG00000017441)	PLAAT5 (ENSPANG00000015204) #12	LGALS12 (ENSPANG00000012182) #13	PLAAT4 (ENSPANG00000045447) #14	PLAAT2 (ENSPANG00000005852) #15	PLAAT3 (ENSPANG00000032107) #16	ATL3 (ENSPANG00000025889) #17	RTN3 (ENSPANG00000004686) #19	ENSPANG00000045988	SPINDOC (ENSPANG00000043963) #21	MARK2 (ENSPANG00000026211) #22	RCOR2 (ENSPANG00000007283) #23	NAA40 (ENSPANG00000002369) #24	COX8A (ENSPANG00000039572) #25	OTUB1 (ENSPANG00000032360) #26	MACROD1 (ENSPANG00000005925) #27	FLRT1 (ENSPANG00000003558) #28	STIP1 (ENSPANG00000017079) #30	FERMT3 (ENSPANG00000011407) #31	TRPT1 (ENSPANG00000011001) #32	NUDT22 (ENSPANG00000015654) #33	DNAJC4 (ENSPANG00000017262) #34	VEGFB (ENSPANG00000003693) #35	FKBP2 (ENSPANG00000031845) #36	ENSPANG00000012133 ##37	ENSPANG00000012183
Cercopithecinae_d	ANCESTRAL SPECIES	6	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00550000075025.`b.b.b #18	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00910000147058 #29	ENSGT00940000154911.u #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b.j.g.b ##37
Sooty mangabey	MODERN SPECIES	518	WDR74 (ENSCATG00000035035)	SLC3A2 (ENSCATG00000043727)	CHRM1 (ENSCATG00000004775)	ENSCATG00000005005	SLC22A6 (ENSCATG00000033614)	SLC22A8 (ENSCATG00000034455)	PLAAT5 (ENSCATG00000035197) #12	LGALS12 (ENSCATG00000038681) #13	PLAAT4 (ENSCATG00000042576) #14	PLAAT2 (ENSCATG00000043587) #15	PLAAT3 (ENSCATG00000039316) #16	ATL3 (ENSCATG00000034537) #17	RTN3 (ENSCATG00000038469) #19	ZFTA (ENSCATG00000038355) #20	SPINDOC (ENSCATG00000043222) #21	MARK2 (ENSCATG00000030205) #22	RCOR2 (ENSCATG00000033413) #23	NAA40 (ENSCATG00000035111) #24	COX8A (ENSCATG00000033437) #25	OTUB1 (ENSCATG00000036180) #26	FLRT1 (ENSCATG00000003844) #28	ENSCATG00000033959 #29	MACROD1 (ENSCATG00000037653) #27	STIP1 (ENSCATG00000038593) #30	FERMT3 (ENSCATG00000036049) #31	TRPT1 (ENSCATG00000031563) #32	NUDT22 (ENSCATG00000033002) #33	DNAJC4 (ENSCATG00000031950) #34	VEGFB (ENSCATG00000031275) #35	FKBP2 (ENSCATG00000039463) #36	ENSCATG00000038370 #37
Drill	MODERN SPECIES	1111	SLC3A2 (ENSMLEG00000042574)	CHRM1 (ENSMLEG00000023394)	ENSMLEG00000022707	SLC22A6 (ENSMLEG00000031737)	SLC22A8 (ENSMLEG00000044339)	PLAAT5 (ENSMLEG00000040885) #12	LGALS12 (ENSMLEG00000041910) #13	PLAAT4 (ENSMLEG00000043996) #14	PLAAT2 (ENSMLEG00000034362) #15	PLAAT3 (ENSMLEG00000036330) #16	ATL3 (ENSMLEG00000040413) #17	ENSMLEG00000004674 #18	RTN3 (ENSMLEG00000009760) #19	ZFTA (ENSMLEG00000038685) #20	SPINDOC (ENSMLEG00000042638) #21	MARK2 (ENSMLEG00000042721) #22	RCOR2 (ENSMLEG00000041544) #23	NAA40 (ENSMLEG00000040713) #24	COX8A (ENSMLEG00000043306) #25	OTUB1 (ENSMLEG00000039512) #26	MACROD1 (ENSMLEG00000038936) #27	FLRT1 (ENSMLEG00000027310) #28	ENSMLEG00000022551 #29	STIP1 (ENSMLEG00000034810) #30	FERMT3 (ENSMLEG00000042680) #31	TRPT1 (ENSMLEG00000031438) #32	NUDT22 (ENSMLEG00000029253) #33	DNAJC4 (ENSMLEG00000009864) #34	VEGFB (ENSMLEG00000039775) #35	FKBP2 (ENSMLEG00000040653) #36	ENSMLEG00000039492 ##37
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911.x.a #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Mas night monkey	MODERN SPECIES	660				OR4S2 (ENSANAG00000019631)	ENSANAG00000028961	SLC22A10 (ENSANAG00000030438) #10	PLAAT5 (ENSANAG00000031837) #12	LGALS12 (ENSANAG00000029421) #13	PLAAT4 (ENSANAG00000032580) #14	PLAAT2 (ENSANAG00000032718) #15	PLAAT3 (ENSANAG00000033413) #16	ATL3 (ENSANAG00000023785) #17	RTN3 (ENSANAG00000028798) #19	ZFTA (ENSANAG00000020678) #20	SPINDOC (ENSANAG00000025822) #21	MARK2 (ENSANAG00000033532) #22	RCOR2 (ENSANAG00000020576) #23	NAA40 (ENSANAG00000032686) #24	COX8A (ENSANAG00000038341) #25	OTUB1 (ENSANAG00000020656) #26	MACROD1 (ENSANAG00000037887) #27	FLRT1 (ENSANAG00000019976) #28	ENSANAG00000026818	ENSANAG00000032349 #30	FERMT3 (ENSANAG00000030526) #31	TRPT1 (ENSANAG00000019580) #32	NUDT22 (ENSANAG00000024100) #33	DNAJC4 (ENSANAG00000036443) #34	VEGFB (ENSANAG00000024046) #35	ENSANAG00000025147 #36	ENSANAG00000026105 #37
Cebidae	ANCESTRAL SPECIES		ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911.x.a #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Marmoset	MODERN SPECIES	2	ENSCJAG00000080197	SLC22A6 (ENSCJAG00000018534)	SLC22A8 (ENSCJAG00000046805)	ENSCJAG00000043818	SLC22A10 (ENSCJAG00000018512) #10	PLAAT5 (ENSCJAG00000038446) #12	LGALS12 (ENSCJAG00000018504) #13	PLAAT4 (ENSCJAG00000018491) #14	PLAAT2 (ENSCJAG00000018481) #15	PLAAT3 (ENSCJAG00000018470) #16	ENSCJAG00000033686	ATL3 (ENSCJAG00000018444) #17	RTN3 (ENSCJAG00000018422) #19	ZFTA (ENSCJAG00000047167) #20	SPINDOC (ENSCJAG00000018418) #21	MARK2 (ENSCJAG00000018341) #22	RCOR2 (ENSCJAG00000018326) #23	NAA40 (ENSCJAG00000018311) #24	COX8A (ENSCJAG00000074447) #25	OTUB1 (ENSCJAG00000018269) #26	MACROD1 (ENSCJAG00000018256) #27	FLRT1 (ENSCJAG00000055401) #28	STIP1 (ENSCJAG00000018209) #30	FERMT3 (ENSCJAG00000018177) #31	TRPT1 (ENSCJAG00000018169) #32	NUDT22 (ENSCJAG00000018163) #33	DNAJC4 (ENSCJAG00000018151) #34	VEGFB (ENSCJAG00000018126) #35	FKBP2 (ENSCJAG00000038946) #36	PPP1R14B (ENSCJAG00000047020) #37	PLCB3 (ENSCJAG00000018081)
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000167143 #8	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911.x.a #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Bolivian squirrel monkey	MODERN SPECIES	136														ZFTA (ENSSBOG00000028397) #20	SPINDOC (ENSSBOG00000023825) #21	MARK2 (ENSSBOG00000020420) #22	RCOR2 (ENSSBOG00000021695) #23	NAA40 (ENSSBOG00000024359) #24	COX8A (ENSSBOG00000024157) #25	OTUB1 (ENSSBOG00000019941) #26	MACROD1 (ENSSBOG00000026519) #27	FLRT1 (ENSSBOG00000015764) #28	ENSSBOG00000034056 #30	FERMT3 (ENSSBOG00000021492) #31	TRPT1 (ENSSBOG00000021466) #32	NUDT22 (ENSSBOG00000033768) #33	DNAJC4 (ENSSBOG00000025899) #34	VEGFB (ENSSBOG00000034135) #35	FKBP2 (ENSSBOG00000023698) #36	PPP1R14B (ENSSBOG00000020178) #37	PLCB3 (ENSSBOG00000035119)
Capuchin	MODERN SPECIES	607					SLC22A10 (ENSCCAG00000022761) #10	SLC22A9 (ENSCCAG00000026486) #11	PLAAT5 (ENSCCAG00000027609) #12	LGALS12 (ENSCCAG00000028471) #13	PLAAT4 (ENSCCAG00000022470) #14	PLAAT2 (ENSCCAG00000030706) #15	PLAAT3 (ENSCCAG00000031006) #16	ATL3 (ENSCCAG00000028804) #17	RTN3 (ENSCCAG00000031067) #19	ZFTA (ENSCCAG00000033893) #20	SPINDOC (ENSCCAG00000033312) #21	MARK2 (ENSCCAG00000023839) #22	RCOR2 (ENSCCAG00000034366) #23	NAA40 (ENSCCAG00000025805) #24	COX8A (ENSCCAG00000027068) #25	OTUB1 (ENSCCAG00000032506) #26	FLRT1 (ENSCCAG00000017569) #28	MACROD1 (ENSCCAG00000032101) #27	ENSCCAG00000023102 #30	FERMT3 (ENSCCAG00000028265) #31	TRPT1 (ENSCCAG00000025683) #32
Tarsier	MODERN SPECIES	2122																MARK2 (ENSTSYG00000000032) #22
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT01030000235608	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Mouse lemur	MODERN SPECIES	27	ODF3 (ENSMICG00000006280)	ENSMICG00000043591	LSP1 (ENSMICG00000047398)	SYT8 (ENSMICG00000031880)	CTSD (ENSMICG00000027956)	IFITM10 (ENSMICG00000028547)	ENSMICG00000044655	ENSMICG00000034520	PLAAT4 (ENSMICG00000044321) #14	PLAAT2 (ENSMICG00000043198) #15	PLAAT3 (ENSMICG00000042074) #16	ATL3 (ENSMICG00000015189) #17	RTN3 (ENSMICG00000015208) #19	ZFTA (ENSMICG00000015216) #20	SPINDOC (ENSMICG00000016878) #21	MARK2 (ENSMICG00000016891) #22	RCOR2 (ENSMICG00000016903) #23	NAA40 (ENSMICG00000016908) #24	COX8A (ENSMICG00000044396) #25	OTUB1 (ENSMICG00000016916) #26	FLRT1 (ENSMICG00000047913) #28	MACROD1 (ENSMICG00000048123) #27	ENSMICG00000016933 #30	TRPT1 (ENSMICG00000016950) #32	FERMT3 (ENSMICG00000016943) #31	NUDT22 (ENSMICG00000033716) #33	DNAJC4 (ENSMICG00000016955) #34	VEGFB (ENSMICG00000016957) #35	FKBP2 (ENSMICG00000016960) #36	PPP1R14B (ENSMICG00000036134) #37	PLCB3 (ENSMICG00000016970)
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00940000157182	ENSGT00390000002105	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Coquerels sifaka	MODERN SPECIES	124	FADD (ENSPCOG00000022951)	PPFIA1 (ENSPCOG00000028686)	CTTN (ENSPCOG00000010752)	SHANK2 (ENSPCOG00000017133)	DHCR7 (ENSPCOG00000020649)	NADSYN1 (ENSPCOG00000020772)	LGALS12 (ENSPCOG00000027553) #13	PLAAT4 (ENSPCOG00000026183) #14	PLAAT2 (ENSPCOG00000022949) #15	PLAAT3 (ENSPCOG00000006605) #16	ATL3 (ENSPCOG00000024845) #17	ENSPCOG00000016694	RTN3 (ENSPCOG00000004638) #19	ZFTA (ENSPCOG00000014744) #20	SPINDOC (ENSPCOG00000028492) #21	MARK2 (ENSPCOG00000015081) #22	RCOR2 (ENSPCOG00000020568) #23	NAA40 (ENSPCOG00000020757) #24	COX8A (ENSPCOG00000025872) #25	OTUB1 (ENSPCOG00000016768) #26	FLRT1 (ENSPCOG00000013563) #28	MACROD1 (ENSPCOG00000023544) #27	STIP1 (ENSPCOG00000014850) #30	FERMT3 (ENSPCOG00000000399) #31	TRPT1 (ENSPCOG00000010370) #32	NUDT22 (ENSPCOG00000022559) #33	DNAJC4 (ENSPCOG00000016505) #34	VEGFB (ENSPCOG00000015577) #35	FKBP2 (ENSPCOG00000014307) #36	ENSPCOG00000028120 #37	PLCB3 (ENSPCOG00000027858)
Greater bamboo lemur	MODERN SPECIES	696											PLAAT3 (ENSPSMG00000000858) #16	ATL3 (ENSPSMG00000000970) #17	RTN3 (ENSPSMG00000001175) #19	ZFTA (ENSPSMG00000001264) #20	SPINDOC (ENSPSMG00000001288) #21	MARK2 (ENSPSMG00000001867) #22	RCOR2 (ENSPSMG00000003230) #23	NAA40 (ENSPSMG00000003280) #24	COX8A (ENSPSMG00000003291) #25	OTUB1 (ENSPSMG00000003353) #26	MACROD1 (ENSPSMG00000003466) #27	FLRT1 (ENSPSMG00000003476) #28	ENSPSMG00000003478	ENSPSMG00000003481 #30	FERMT3 (ENSPSMG00000003497) #31	TRPT1 (ENSPSMG00000003527) #32	NUDT22 (ENSPSMG00000003569) #33	DNAJC4 (ENSPSMG00000003581) #34	VEGFB (ENSPSMG00000003600) #35	FKBP2 (ENSPSMG00000003619) #36	PPP1R14B (ENSPSMG00000003637) #37
Bushbaby	MODERN SPECIES	255						ENSOGAG00000033531	ENSOGAG00000034934	DHCR7 (ENSOGAG00000001242)	NADSYN1 (ENSOGAG00000001243)	PLAAT4 (ENSOGAG00000005197) #14	PLAAT3 (ENSOGAG00000027691) #16	ATL3 (ENSOGAG00000003756) #17	RTN3 (ENSOGAG00000003760) #19	ZFTA (ENSOGAG00000030093) #20	SPINDOC (ENSOGAG00000005020) #21	MARK2 (ENSOGAG00000007105) #22	RCOR2 (ENSOGAG00000007109) #23	NAA40 (ENSOGAG00000013369) #24	COX8A (ENSOGAG00000007112) #25	OTUB1 (ENSOGAG00000007114) #26	MACROD1 (ENSOGAG00000027152) #27	FLRT1 (ENSOGAG00000007115) #28	STIP1 (ENSOGAG00000007117) #30	FERMT3 (ENSOGAG00000007125) #31	TRPT1 (ENSOGAG00000007134) #32	NUDT22 (ENSOGAG00000007136) #33	DNAJC4 (ENSOGAG00000007140) #34	VEGFB (ENSOGAG00000007142) #35	FKBP2 (ENSOGAG00000028269) #36	PPP1R14B (ENSOGAG00000030926) #37	PLCB3 (ENSOGAG00000007150)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Tree shrew	MODERN SPECIES	4876																ENSTBEG00000009511 #22	RCOR2 (ENSTBEG00000002486) #23	NAA40 (ENSTBEG00000003305) #24	COX8A (ENSTBEG00000004032) #25	OTUB1 (ENSTBEG00000004225) #26	MACROD1 (ENSTBEG00000005242) #27	STIP1 (ENSTBEG00000006569) #30
Glires	ANCESTRAL SPECIES	1	ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Lagomorpha	ANCESTRAL SPECIES	161	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162660.b.f	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00980000200147	ENSGT00940000175551	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25
Rabbit	MODERN SPECIES	450	ENSOCUG00000031453	ENSOCUG00000039162	ENSOCUG00000014725 #7	ENSOCUG00000012529 #11	ENSOCUG00000012507 #11	ENSOCUG00000025543 #11	PLAAT5 (ENSOCUG00000010294) #12	ENSOCUG00000036699	LGALS12 (ENSOCUG00000010300) #13	PLAAT2 (ENSOCUG00000026233) #15	PLAAT3 (ENSOCUG00000000596) #16	ATL3 (ENSOCUG00000001691) #17	RTN3 (ENSOCUG00000027508) #19	ENSOCUG00000021330	SPINDOC (ENSOCUG00000024872) #21	MARK2 (ENSOCUG00000007884) #22	RCOR2 (ENSOCUG00000007900) #23	NAA40 (ENSOCUG00000016577) #24	COX8A (ENSOCUG00000017388) #25
Pika	MODERN SPECIES	1206													ENSOPRG00000006369 #19	ENSOPRG00000018202	SPINDOC (ENSOPRG00000006383) #21	MARK2 (ENSOPRG00000006391) #22	ENSOPRG00000006408 #23
Rodentia	ANCESTRAL SPECIES	1	ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000164763 #7	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Sciuridae	ANCESTRAL SPECIES	22								ENSGT00940000154853.c.c #15	ENSGT00940000162878 #14	ENSGT00940000154853.c.d.b #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000164763.f #7	ENSGT00940000164763.e #7	ENSGT00940000162436 #12	ENSGT00940000154853.c.d.b.a.a #15	ENSGT00940000162878 #14	ENSGT00940000154853.c.c.a #15	ENSGT00940000154853.c.d.b.b #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Marmotini_b	ANCESTRAL SPECIES	19										ENSGT00940000154853.c.d.b.a.b #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Squirrel	MODERN SPECIES	199											PLAAT3 (ENSSTOG00000022553) #16	ATL3 (ENSSTOG00000000194) #17	ENSSTOG00000000199 #19	ZFTA (ENSSTOG00000027225) #20	SPINDOC (ENSSTOG00000008900) #21	MARK2 (ENSSTOG00000020436) #22	RCOR2 (ENSSTOG00000011347) #23	NAA40 (ENSSTOG00000011363) #24	COX8A (ENSSTOG00000011372) #25	OTUB1 (ENSSTOG00000026099) #26	FLRT1 (ENSSTOG00000019831) #28	MACROD1 (ENSSTOG00000034108) #27	STIP1 (ENSSTOG00000014262) #30	TRPT1 (ENSSTOG00000014285) #32	FERMT3 (ENSSTOG00000014271) #31	NUDT22 (ENSSTOG00000021715) #33	DNAJC4 (ENSSTOG00000026335) #34	VEGFB (ENSSTOG00000014290) #35	FKBP2 (ENSSTOG00000028785) #36	PPP1R14B (ENSSTOG00000021959) #37	PLCB3 (ENSSTOG00000008397)
Arctic ground squirrel	MODERN SPECIES	620										ENSUPAG00010010469 #15	PLAAT3 (ENSUPAG00010010461) #16	ATL3 (ENSUPAG00010008777) #17	RTN3 (ENSUPAG00010008723) #19	ZFTA (ENSUPAG00010008715) #20	SPINDOC (ENSUPAG00010008697) #21	MARK2 (ENSUPAG00010008066) #22	RCOR2 (ENSUPAG00010008026) #23	NAA40 (ENSUPAG00010008016) #24	COX8A (ENSUPAG00010008008) #25	OTUB1 (ENSUPAG00010007945) #26	FLRT1 (ENSUPAG00010007939) #28	MACROD1 (ENSUPAG00010007872) #27	STIP1 (ENSUPAG00010007782) #30	FERMT3 (ENSUPAG00010007770) #31	TRPT1 (ENSUPAG00010007757) #32	NUDT22 (ENSUPAG00010007753) #33	DNAJC4 (ENSUPAG00010007738) #34	VEGFB (ENSUPAG00010007726) #35	FKBP2 (ENSUPAG00010007718) #36	PPP1R14B (ENSUPAG00010007704) #37	PLCB3 (ENSUPAG00010007660)
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000004930 #11	ENSMMMG00000004981 #7	ENSMMMG00000005768 #11	ENSMMMG00000005778 #7	PLAAT5 (ENSMMMG00000006630) #12	ENSMMMG00000006639 #15	ENSMMMG00000006645	ENSMMMG00000006652 #15	ENSMMMG00000006663 #14	ENSMMMG00000006666 #15	ENSMMMG00000006716 #15	PLAAT3 (ENSMMMG00000006751) #16	ATL3 (ENSMMMG00000006763) #17	ENSMMMG00000006783 #19	SPINDOC (ENSMMMG00000006798) #21	MARK2 (ENSMMMG00000006813) #22	RCOR2 (ENSMMMG00000007445) #23	NAA40 (ENSMMMG00000007472) #24	COX8A (ENSMMMG00000007506) #25	OTUB1 (ENSMMMG00000007484) #26	MACROD1 (ENSMMMG00000007514) #27	FLRT1 (ENSMMMG00000007522) #28	STIP1 (ENSMMMG00000007560) #30	FERMT3 (ENSMMMG00000007580) #31	TRPT1 (ENSMMMG00000007609) #32	NUDT22 (ENSMMMG00000007628) #33	DNAJC4 (ENSMMMG00000007635) #34	VEGFB (ENSMMMG00000007651) #35	FKBP2 (ENSMMMG00000007672) #36	PPP1R14B (ENSMMMG00000007711) #37	PLCB3 (ENSMMMG00000007736)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005023641 #11	ENSSVLG00005023580 #11	ENSSVLG00005023561 #11	ENSSVLG00005022993 #11	PLAAT5 (ENSSVLG00005022788) #12	ENSSVLG00005022666 #13	ENSSVLG00005022469 #15	ENSSVLG00005022391 #14	ENSSVLG00005022359 #15	ENSSVLG00005022253 #13	PLAAT3 (ENSSVLG00005022200) #16	ATL3 (ENSSVLG00005022126) #17	RTN3 (ENSSVLG00005021816) #19	ZFTA (ENSSVLG00005021728) #20	ENSSVLG00005021665 #21	MARK2 (ENSSVLG00005020452) #22	RCOR2 (ENSSVLG00005020151) #23	ENSSVLG00005020084	ENSSVLG00005019870 #24	COX8A (ENSSVLG00005019802) #25	OTUB1 (ENSSVLG00005019708) #26	FLRT1 (ENSSVLG00005019639) #28	MACROD1 (ENSSVLG00005019517) #27	STIP1 (ENSSVLG00005019327) #30	FERMT3 (ENSSVLG00005019185) #31	TRPT1 (ENSSVLG00005018880) #32	NUDT22 (ENSSVLG00005018795) #33	DNAJC4 (ENSSVLG00005018674) #34	FKBP2 (ENSSVLG00005018547) #36	PPP1R14B (ENSSVLG00005018431) #37	PLCB3 (ENSSVLG00005018092)
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00670000098074	ENSGT00940000160237	ENSGT00940000160266	ENSGT00940000161328	ENSGT00940000159011	ENSGT00390000016390	ENSGT00940000155211	ENSGT00390000015513.a.a.a	ENSGT00390000015513.a.a.b	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000005827	FANCC (ENSHGLG00000013830)	ENSHGLG00000044815	ENSHGLG00000012042	ENSHGLG00000045615	FBP1 (ENSHGLG00000050880)	ENSHGLG00000012322	ENSHGLG00000012161	ENSHGLG00000014812	ENSHGLG00000050757 #15	ENSHGLG00000033662 #16	ENSHGLG00000010138 #17	ENSHGLG00000037041 #19	ZFTA (ENSHGLG00000011849) #20	SPINDOC (ENSHGLG00000034024) #21	ENSHGLG00000011808 #22	RCOR2 (ENSHGLG00000014109) #23	NAA40 (ENSHGLG00000013175) #24	COX8A (ENSHGLG00000012316) #25	ENSHGLG00000011812 #26	MACROD1 (ENSHGLG00000018799) #27	FLRT1 (ENSHGLG00000045678) #28	STIP1 (ENSHGLG00000016796) #30	TRPT1 (ENSHGLG00000013748) #32	NUDT22 (ENSHGLG00000012442) #33	DNAJC4 (ENSHGLG00000010363) #34	ENSHGLG00000013921 #35	FKBP2 (ENSHGLG00000037212) #36	PPP1R14B (ENSHGLG00000041422) #37	BAD (ENSHGLG00000013154)	GPR137 (ENSHGLG00000010359)
Naked mole-rat female	MODERN SPECIES	28	GPD1L (ENSHGLG00000046132)	ENSHGLG00000035456	ENSHGLG00000047272	ENSHGLG00000037369	CMTM8 (ENSHGLG00000003541)	CMTM7 (ENSHGLG00000001487)	ENSHGLG00000034894	ENSHGLG00000001574	ENSHGLG00000001731	ENSHGLG00000019891	ENSHGLG00000039776	ENSHGLG00000047516	ENSHGLG00000001826	ENSHGLG00000002090	GLB1 (ENSHGLG00000002150)	ENSHGLG00000002496 #22	ENSHGLG00000037229	CRTAP (ENSHGLG00000002614)	SUSD5 (ENSHGLG00000040528)	ENSHGLG00000037082	ENSHGLG00000002747	FBXL2 (ENSHGLG00000002144)	UBP1 (ENSHGLG00000002333)	ENSHGLG00000003013	PDCD6IP (ENSHGLG00000004033)	ENSHGLG00000001187	ENSHGLG00000040644	ENSHGLG00000033661	ENSHGLG00000035031	ENSHGLG00000050797	ENSHGLG00000036492
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00670000098074	ENSGT00940000160237	ENSGT00940000160266	ENSGT00940000161328	ENSGT00940000159011	ENSGT00390000016390	ENSGT00940000155211	ENSGT00390000015513.a.a.a	ENSGT00390000015513.a.a.b	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00940000160237	ENSGT00940000160266	ENSGT00940000161328	ENSGT00940000163752	ENSGT00940000159011	ENSGT00390000016390	ENSGT00940000155211	ENSGT00390000015513.a.a.a	ENSGT00390000015513.a.a.b	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Long-tailed chinchilla	MODERN SPECIES	129	PRXL2C (ENSCLAG00000016163)	HSD17B3 (ENSCLAG00000016961)	ERCC6L2 (ENSCLAG00000016395)	PTCH1 (ENSCLAG00000016919)	FANCC (ENSCLAG00000016996)	ENSCLAG00000017128	ENSCLAG00000016743	FBP1 (ENSCLAG00000017181)	FBP2 (ENSCLAG00000016623)	PLAAT2 (ENSCLAG00000016552) #15	PLAAT3 (ENSCLAG00000017157) #16	ATL3 (ENSCLAG00000016950) #17	ENSCLAG00000016800 #19	ZFTA (ENSCLAG00000016548) #20	SPINDOC (ENSCLAG00000016329) #21	MARK2 (ENSCLAG00000017063) #22	RCOR2 (ENSCLAG00000017016) #23	NAA40 (ENSCLAG00000016890) #24	COX8A (ENSCLAG00000017185) #25	OTUB1 (ENSCLAG00000017123) #26	FLRT1 (ENSCLAG00000016935) #28	MACROD1 (ENSCLAG00000016401) #27	STIP1 (ENSCLAG00000017164) #30	TRPT1 (ENSCLAG00000016380) #32	FERMT3 (ENSCLAG00000016183) #31	NUDT22 (ENSCLAG00000016346) #33	DNAJC4 (ENSCLAG00000016759) #34	VEGFB (ENSCLAG00000016750) #35	FKBP2 (ENSCLAG00000017246) #36	PPP1R14B (ENSCLAG00000016868) #37	PLCB3 (ENSCLAG00000016775)
Degu	MODERN SPECIES	225	HSD17B3 (ENSODEG00000015880)	ENSODEG00000016588	ENSODEG00000016127	PTCH1 (ENSODEG00000016019)	ENSODEG00000015865	FANCC (ENSODEG00000016098)	ENSODEG00000015655	FBP1 (ENSODEG00000015932)	FBP2 (ENSODEG00000016600)	ENSODEG00000020437	PLAAT3 (ENSODEG00000015571) #16	ATL3 (ENSODEG00000017260) #17	ENSODEG00000016120 #19	ZFTA (ENSODEG00000015496) #20	SPINDOC (ENSODEG00000015595) #21	MARK2 (ENSODEG00000017191) #22	RCOR2 (ENSODEG00000015765) #23	NAA40 (ENSODEG00000015735) #24	ENSODEG00000015780 #25	ENSODEG00000015747 #26	FLRT1 (ENSODEG00000020298) #28	MACROD1 (ENSODEG00000015291) #27	STIP1 (ENSODEG00000015289) #30	FERMT3 (ENSODEG00000015869) #31	TRPT1 (ENSODEG00000015724) #32	NUDT22 (ENSODEG00000015641) #33	DNAJC4 (ENSODEG00000016243) #34	VEGFB (ENSODEG00000016602) #35	FKBP2 (ENSODEG00000015505) #36	PPP1R14B (ENSODEG00000015767) #37	PLCB3 (ENSODEG00000015366)
Guinea pig	MODERN SPECIES	42	ZNF367 (ENSCPOG00000001515)	HABP4 (ENSCPOG00000002477)	ENSCPOG00000005956	HSD17B3 (ENSCPOG00000000609)	ENSCPOG00000004544	PTCH1 (ENSCPOG00000002376)	FANCC (ENSCPOG00000032150)	AOPEP (ENSCPOG00000038711)	FBP2 (ENSCPOG00000001636)	PLAAT2 (ENSCPOG00000002122) #15	PLAAT3 (ENSCPOG00000034238) #16	ATL3 (ENSCPOG00000003766) #17	ENSCPOG00000004811 #19	ZFTA (ENSCPOG00000033792) #20	SPINDOC (ENSCPOG00000004724) #21	MARK2 (ENSCPOG00000004728) #22	RCOR2 (ENSCPOG00000004737) #23	NAA40 (ENSCPOG00000001891) #24	COX8A (ENSCPOG00000031964) #25	OTUB1 (ENSCPOG00000022165) #26	MACROD1 (ENSCPOG00000011720) #27	FLRT1 (ENSCPOG00000020108) #28	STIP1 (ENSCPOG00000002914) #30	FERMT3 (ENSCPOG00000002919) #31	TRPT1 (ENSCPOG00000002923) #32	NUDT22 (ENSCPOG00000032982) #33	DNAJC4 (ENSCPOG00000040213) #34	VEGFB (ENSCPOG00000032042) #35	FKBP2 (ENSCPOG00000002928) #36	PPP1R14B (ENSCPOG00000002930) #37	PLCB3 (ENSCPOG00000021694)
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.a.a #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00390000015119	ENSGT00940000156646.i	ENSGT00940000156646.j	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00940000160539	ENSGT00940000165892
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000013060	Chrm1 (ENSMAUG00000013069)	Slc22a6 (ENSMAUG00000013676)	Slc22a8 (ENSMAUG00000013177)	ENSMAUG00000013367 #11	Slc22a19 (ENSMAUG00000013315) #11	Plaat5 (ENSMAUG00000013292) #12	Lgals12 (ENSMAUG00000014489) #13	Plaat3 (ENSMAUG00000013633) #16	Atl3 (ENSMAUG00000014736) #17	ENSMAUG00000013612 #19	Zfta (ENSMAUG00000013334) #20	Spindoc (ENSMAUG00000013145) #21	ENSMAUG00000014179 #22	ENSMAUG00000015638	ENSMAUG00000013126 #22	Rcor2 (ENSMAUG00000013529) #23	Naa40 (ENSMAUG00000013206) #24	Cox8a (ENSMAUG00000015109) #25	ENSMAUG00000013281 #26	Macrod1 (ENSMAUG00000013811) #27	Flrt1 (ENSMAUG00000015484) #28	Stip1 (ENSMAUG00000015020) #30	Fermt3 (ENSMAUG00000014915) #31	Trpt1 (ENSMAUG00000014107) #32	Vegfb (ENSMAUG00000013835) #35	ENSMAUG00000013396 #36	Bad (ENSMAUG00000013587)	Gpr137 (ENSMAUG00000013567)	Kcnk4 (ENSMAUG00000013496)	Catsperz (ENSMAUG00000013579)
Golden Hamster	MODERN SPECIES	617	Wdr74 (ENSMAUG00000012992)	ENSMAUG00000013043	ENSMAUG00000013060	Chrm1 (ENSMAUG00000013069)	Slc22a6 (ENSMAUG00000013676)	Slc22a8 (ENSMAUG00000013177)	ENSMAUG00000013367 #11	Slc22a19 (ENSMAUG00000013315) #11	Plaat5 (ENSMAUG00000013292) #12	Lgals12 (ENSMAUG00000014489) #13	Plaat3 (ENSMAUG00000013633) #16	Atl3 (ENSMAUG00000014736) #17	ENSMAUG00000013612 #19	Zfta (ENSMAUG00000013334) #20	Spindoc (ENSMAUG00000013145) #21	ENSMAUG00000014179 #22	ENSMAUG00000015638	ENSMAUG00000013126 #22	Rcor2 (ENSMAUG00000013529) #23	Naa40 (ENSMAUG00000013206) #24	Cox8a (ENSMAUG00000015109) #25	ENSMAUG00000013281 #26	Macrod1 (ENSMAUG00000013811) #27	Flrt1 (ENSMAUG00000015484) #28	Stip1 (ENSMAUG00000015020) #30	Fermt3 (ENSMAUG00000014915) #31	Trpt1 (ENSMAUG00000014107) #32	Vegfb (ENSMAUG00000013835) #35	ENSMAUG00000013396 #36	Bad (ENSMAUG00000013587)	Gpr137 (ENSMAUG00000013567)
Chinese hamster chok1gshd	MODERN SPECIES	401	Wdr74 (ENSCGRG00001004246)	Slc3a2 (ENSCGRG00001025072)	Chrm1 (ENSCGRG00001002011)	Slc22a6 (ENSCGRG00001015989)	Slc22a8 (ENSCGRG00001007311)	ENSCGRG00001003608 #11	ENSCGRG00001021584	Slc22a19 (ENSCGRG00001022436) #11	Plaat5 (ENSCGRG00001019087) #12	Lgals12 (ENSCGRG00001010564) #13	Plaat3 (ENSCGRG00001007573) #16	Atl3 (ENSCGRG00001018013) #17	Rtn3 (ENSCGRG00001018871) #19	Zfta (ENSCGRG00001004358) #20	Spindoc (ENSCGRG00001001090) #21	Mark2 (ENSCGRG00001010551) #22	Rcor2 (ENSCGRG00001008621) #23	ENSCGRG00001004057 #24	Cox8a (ENSCGRG00001024928) #25	Otub1 (ENSCGRG00001012395) #26	Flrt1 (ENSCGRG00001011678) #28	Macrod1 (ENSCGRG00001022618) #27	Stip1 (ENSCGRG00001018895) #30	Fermt3 (ENSCGRG00001013797) #31	Trpt1 (ENSCGRG00001008474) #32	Nudt22 (ENSCGRG00001001214) #33	Dnajc4 (ENSCGRG00001021692) #34	Vegfb (ENSCGRG00001019009) #35	Ppp1r14b (ENSCGRG00001018612) #37	ENSCGRG00001017620 #36	Plcb3 (ENSCGRG00001015760)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Northern American deer mouse	MODERN SPECIES		Slc22a6 (ENSPEMG00000010064)	Slc22a8 (ENSPEMG00000005685)	ENSPEMG00000008490 #11	ENSPEMG00000025227 #11	ENSPEMG00000017469 #11	ENSPEMG00000025385 #11	Slc22a19 (ENSPEMG00000011237) #11	ENSPEMG00000030267 #11	Plaat5 (ENSPEMG00000007949) #12	Lgals12 (ENSPEMG00000002696) #13	Plaat3 (ENSPEMG00000015751) #16	Atl3 (ENSPEMG00000017714) #17	ENSPEMG00000006921 #19	Zfta (ENSPEMG00000015536) #20	Spindoc (ENSPEMG00000005634) #21	Mark2 (ENSPEMG00000004482) #22	Rcor2 (ENSPEMG00000018762) #23	Naa40 (ENSPEMG00000014476) #24	Cox8a (ENSPEMG00000025233) #25	Otub1 (ENSPEMG00000014074) #26	Flrt1 (ENSPEMG00000017136) #28	Macrod1 (ENSPEMG00000014855) #27	ENSPEMG00000009317	ENSPEMG00000006132 #30	Fermt3 (ENSPEMG00000017447) #31	Trpt1 (ENSPEMG00000013720) #32	Nudt22 (ENSPEMG00000002624) #33	Dnajc4 (ENSPEMG00000018531) #34	Vegfb (ENSPEMG00000012050) #35	ENSPEMG00000018692 #36	Ppp1r14b (ENSPEMG00000015080) #37
Prairie vole	MODERN SPECIES	16	ENSMOCG00000009004	Chrm1 (ENSMOCG00000002497)	Slc22a6 (ENSMOCG00000021104)	Slc22a8 (ENSMOCG00000011371)	ENSMOCG00000002914 #11	ENSMOCG00000019218 #11	ENSMOCG00000001921	Slc22a19 (ENSMOCG00000020438) #11	Plaat5 (ENSMOCG00000016896) #12	Lgals12 (ENSMOCG00000019635) #13	Plaat3 (ENSMOCG00000016945) #16	Atl3 (ENSMOCG00000014305) #17	ENSMOCG00000001558 #19	ENSMOCG00000016523 #20	Spindoc (ENSMOCG00000016927) #21	Mark2 (ENSMOCG00000015697) #22	Rcor2 (ENSMOCG00000001766) #23	Naa40 (ENSMOCG00000014326) #24	Cox8a (ENSMOCG00000002916) #25	ENSMOCG00000001410 #26	Flrt1 (ENSMOCG00000013861) #28	Macrod1 (ENSMOCG00000011709) #27	Stip1 (ENSMOCG00000013041) #30	Fermt3 (ENSMOCG00000006698) #31	Trpt1 (ENSMOCG00000021342) #32	Nudt22 (ENSMOCG00000018073) #33	Dnajc4 (ENSMOCG00000016715) #34	Vegfb (ENSMOCG00000021740) #35	ENSMOCG00000019729 #36	Ppp1r14b (ENSMOCG00000017324) #37	Plcb3 (ENSMOCG00000003068)
Murinae	ANCESTRAL SPECIES		ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Mus	ANCESTRAL SPECIES		ENSGT01000000214440.C	ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Mus_A	ANCESTRAL SPECIES	16	ENSGT00700000106100	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.a.a #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00940000160539	ENSGT00390000010740
Mouse	MODERN SPECIES	10	Slc22a6 (ENSMUSG00000024650)	Slc22a8 (ENSMUSG00000063796)	Slc22a30 (ENSMUSG00000052562) #11	Slc22a29 (ENSMUSG00000075044) #11	Slc22a28 (ENSMUSG00000063590) #11	Slc22a27 (ENSMUSG00000067656) #11	Slc22a26 (ENSMUSG00000053303) #11	Slc22a19 (ENSMUSG00000024757) #11	Plaat5 (ENSMUSG00000024973) #12	Lgals12 (ENSMUSG00000024972) #13	Plaat3 (ENSMUSG00000060675) #16	Atl3 (ENSMUSG00000024759) #17	Rtn3 (ENSMUSG00000024758) #19	Zfta (ENSMUSG00000053080) #20	Spindoc (ENSMUSG00000024970) #21	Mark2 (ENSMUSG00000024969) #22	Rcor2 (ENSMUSG00000024968) #23	Naa40 (ENSMUSG00000024764) #24	Cox8a (ENSMUSG00000035885) #25	Otub1 (ENSMUSG00000024767) #26	Flrt1 (ENSMUSG00000047787) #28	Macrod1 (ENSMUSG00000036278) #27	Stip1 (ENSMUSG00000024966) #30	Fermt3 (ENSMUSG00000024965) #31	Trpt1 (ENSMUSG00000047656) #32	Nudt22 (ENSMUSG00000037349) #33	Dnajc4 (ENSMUSG00000024963) #34	Vegfb (ENSMUSG00000024962) #35	Fkbp2 (ENSMUSG00000056629)	Ppp1r14b (ENSMUSG00000056612) #37	Plcb3 (ENSMUSG00000024960)
Mus_C	ANCESTRAL SPECIES	25	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.d #11	ENSGT00940000161239.c.a.a #11	ENSGT00940000161239.c.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00940000160539	ENSGT00390000010740
Steppe mouse	MODERN SPECIES	2692								ENSMSIG00000020382 #11	Plaat5 (ENSMSIG00000020351) #12	Lgals12 (ENSMSIG00000020293) #13	Plaat3 (ENSMSIG00000020245) #16	Atl3 (ENSMSIG00000020181) #17	Rtn3 (ENSMSIG00000020070) #19	Zfta (ENSMSIG00000020051) #20	Spindoc (ENSMSIG00000020022) #21	Mark2 (ENSMSIG00000019791) #22	ENSMSIG00000019781	Rcor2 (ENSMSIG00000019762) #23	Naa40 (ENSMSIG00000019717) #24	Cox8a (ENSMSIG00000019707) #25	Otub1 (ENSMSIG00000019681) #26	Flrt1 (ENSMSIG00000019670) #28	Macrod1 (ENSMSIG00000019622) #27	Stip1 (ENSMSIG00000019592) #30	Fermt3 (ENSMSIG00000019566) #31	Nudt22 (ENSMSIG00000019552) #33	ENSMSIG00000019513 #32	Dnajc4 (ENSMSIG00000019476) #34	ENSMSIG00000019463 #35
spretus	MODERN SPECIES	10	Tex54 (MGP_SPRETEiJ_G0023562)	Wdr74 (MGP_SPRETEiJ_G0023561)	Slc3a2 (MGP_SPRETEiJ_G0023560)	Chrm1 (MGP_SPRETEiJ_G0023559)	Slc22a6 (MGP_SPRETEiJ_G0023558)	Slc22a8 (MGP_SPRETEiJ_G0023557)	MGP_SPRETEiJ_G0023555 #11	Slc22a19 (MGP_SPRETEiJ_G0023554) #11	MGP_SPRETEiJ_G0023553 #12	Lgals12 (MGP_SPRETEiJ_G0023552) #13	Plaat3 (MGP_SPRETEiJ_G0023551) #16	Atl3 (MGP_SPRETEiJ_G0023550) #17	Rtn3 (MGP_SPRETEiJ_G0023549) #19	Zfta (MGP_SPRETEiJ_G0023548) #20	Spindoc (MGP_SPRETEiJ_G0023547) #21	Mark2 (MGP_SPRETEiJ_G0023546) #22	Rcor2 (MGP_SPRETEiJ_G0023545) #23	Naa40 (MGP_SPRETEiJ_G0023544) #24	Cox8a (MGP_SPRETEiJ_G0023543) #25	Otub1 (MGP_SPRETEiJ_G0023542) #26	Flrt1 (MGP_SPRETEiJ_G0023541) #28	Macrod1 (MGP_SPRETEiJ_G0023540) #27	Stip1 (MGP_SPRETEiJ_G0023539) #30	Fermt3 (MGP_SPRETEiJ_G0023538) #31	Trpt1 (MGP_SPRETEiJ_G0023537) #32	Nudt22 (MGP_SPRETEiJ_G0023536) #33	Dnajc4 (MGP_SPRETEiJ_G0023535) #34	Vegfb (MGP_SPRETEiJ_G0023534) #35	MGP_SPRETEiJ_G0023533 #36	Plcb3 (MGP_SPRETEiJ_G0023532)	Bad (MGP_SPRETEiJ_G0023531)
Ryukyu mouse	MODERN SPECIES	10	Nxf1 (MGP_CAROLIEiJ_G0022651)	Stx5a (MGP_CAROLIEiJ_G0022650)	Tex54 (MGP_CAROLIEiJ_G0022649)	Wdr74 (MGP_CAROLIEiJ_G0022648)	Slc3a2 (MGP_CAROLIEiJ_G0022647)	Chrm1 (MGP_CAROLIEiJ_G0022646)	Slc22a6 (MGP_CAROLIEiJ_G0022645)	Slc22a8 (MGP_CAROLIEiJ_G0022644)	MGP_CAROLIEiJ_G0022643 #12	Lgals12 (MGP_CAROLIEiJ_G0022642) #13	Plaat3 (MGP_CAROLIEiJ_G0022641) #16	Atl3 (MGP_CAROLIEiJ_G0022640) #17	Rtn3 (MGP_CAROLIEiJ_G0022639) #19	Zfta (MGP_CAROLIEiJ_G0022638) #20	Spindoc (MGP_CAROLIEiJ_G0022637) #21	Mark2 (MGP_CAROLIEiJ_G0022636) #22	Rcor2 (MGP_CAROLIEiJ_G0022635) #23	Naa40 (MGP_CAROLIEiJ_G0022634) #24	Cox8a (MGP_CAROLIEiJ_G0022633) #25	MGP_CAROLIEiJ_G0022632 #26	Flrt1 (MGP_CAROLIEiJ_G0022631) #28	Macrod1 (MGP_CAROLIEiJ_G0022630) #27	Stip1 (MGP_CAROLIEiJ_G0022629) #30	Fermt3 (MGP_CAROLIEiJ_G0022628) #31	Trpt1 (MGP_CAROLIEiJ_G0022627) #32	Nudt22 (MGP_CAROLIEiJ_G0022626) #33	Dnajc4 (MGP_CAROLIEiJ_G0022625) #34	Vegfb (MGP_CAROLIEiJ_G0022624) #35	MGP_CAROLIEiJ_G0022623 #36	MGP_CAROLIEiJ_G0022622 #37	Plcb3 (MGP_CAROLIEiJ_G0022621)
Shrew mouse	MODERN SPECIES		MGP_PahariEiJ_G0014145	Tex54 (MGP_PahariEiJ_G0014144)	Wdr74 (MGP_PahariEiJ_G0014143)	Slc3a2 (MGP_PahariEiJ_G0014142)	Chrm1 (MGP_PahariEiJ_G0014141)	Slc22a6 (MGP_PahariEiJ_G0014140)	Slc22a8 (MGP_PahariEiJ_G0014139)	MGP_PahariEiJ_G0014138 #11	MGP_PahariEiJ_G0014137 #12	Lgals12 (MGP_PahariEiJ_G0014136) #13	Plaat3 (MGP_PahariEiJ_G0014135) #16	Atl3 (MGP_PahariEiJ_G0014134) #17	Rtn3 (MGP_PahariEiJ_G0014133) #19	Zfta (MGP_PahariEiJ_G0014132) #20	Spindoc (MGP_PahariEiJ_G0014131) #21	Mark2 (MGP_PahariEiJ_G0014130) #22	Rcor2 (MGP_PahariEiJ_G0014129) #23	Naa40 (MGP_PahariEiJ_G0014128) #24	Cox8a (MGP_PahariEiJ_G0014127) #25	Otub1 (MGP_PahariEiJ_G0014126) #26	Flrt1 (MGP_PahariEiJ_G0014125) #28	Macrod1 (MGP_PahariEiJ_G0014124) #27	Stip1 (MGP_PahariEiJ_G0014123) #30	Fermt3 (MGP_PahariEiJ_G0014122) #31	Trpt1 (MGP_PahariEiJ_G0014121) #32	Nudt22 (MGP_PahariEiJ_G0014120) #33	Dnajc4 (MGP_PahariEiJ_G0014119) #34	Vegfb (MGP_PahariEiJ_G0014118) #35	MGP_PahariEiJ_G0014117 #36	MGP_PahariEiJ_G0014116 #37	Plcb3 (MGP_PahariEiJ_G0014115)
Rat	MODERN SPECIES		Slc22a6 (ENSRNOG00000018215)	Slc22a8 (ENSRNOG00000018086)	Slc22a25 (ENSRNOG00000017964) #11	Ust5r (ENSRNOG00000061890) #11	UST4r (ENSRNOG00000049826) #11	Dnajb6-ps10 (ENSRNOG00000017884)	Slc22a24 (ENSRNOG00000056396) #11	Plaat5 (ENSRNOG00000023528) #12	Lgals12 (ENSRNOG00000021207) #13	Plaat3 (ENSRNOG00000021206) #16	ENSRNOG00000066743	Atl3 (ENSRNOG00000021203) #17	Rtn3 (ENSRNOG00000021202) #19	Zfta (ENSRNOG00000032042) #20	Spindoc (ENSRNOG00000025061) #21	Mark2 (ENSRNOG00000021184) #22	Rcor2 (ENSRNOG00000060849) #23	Hnrnpr-ps2 (ENSRNOG00000048337)	Naa40 (ENSRNOG00000021179) #24	Otub1 (ENSRNOG00000021175) #26	Flrt1 (ENSRNOG00000022428) #28	Macrod1 (ENSRNOG00000021174) #27	Fermt3 (ENSRNOG00000021161) #31	Trpt1 (ENSRNOG00000023023) #32	Nudt22 (ENSRNOG00000021158) #33	Stip1 (ENSRNOG00000021164) #30	Dnajc4 (ENSRNOG00000043060) #34	Vegfb (ENSRNOG00000021156) #35	Fkbp2 (ENSRNOG00000021153) #36	Ppp1r14b (ENSRNOG00000021151) #37	Plcb3 (ENSRNOG00000021150)
Upper Galilee mountains blind mole rat	MODERN SPECIES	873								Plaat5 (ENSNGAG00000000495) #12	Lgals12 (ENSNGAG00000004004) #13	Plaat3 (ENSNGAG00000018851) #16	Atl3 (ENSNGAG00000009468) #17	ENSNGAG00000005788	ENSNGAG00000000509 #19	Zfta (ENSNGAG00000001076) #20	Spindoc (ENSNGAG00000000047) #21	Mark2 (ENSNGAG00000011826) #22	Rcor2 (ENSNGAG00000010830) #23	Naa40 (ENSNGAG00000016245) #24	ENSNGAG00000015452	ENSNGAG00000010758
Lesser Egyptian jerboa	MODERN SPECIES	60	Stx5a (ENSJJAG00000023191)	Wdr74 (ENSJJAG00000001449)	ENSJJAG00000001125	Chrm1 (ENSJJAG00000013856)	Slc22a6 (ENSJJAG00000009093)	Slc22a8 (ENSJJAG00000023072)	ENSJJAG00000010614 #11	Plaat5 (ENSJJAG00000020253) #12	Lgals12 (ENSJJAG00000014881) #13	Plaat3 (ENSJJAG00000021915) #16	ENSJJAG00000017667	ENSJJAG00000006253 #17	ENSJJAG00000016262 #19	Zfta (ENSJJAG00000019968) #20	Spindoc (ENSJJAG00000014147) #21	Mark2 (ENSJJAG00000018612) #22	Rcor2 (ENSJJAG00000000799) #23	Naa40 (ENSJJAG00000010926) #24	Cox8a (ENSJJAG00000022271) #25	Otub1 (ENSJJAG00000017403) #26	Macrod1 (ENSJJAG00000010697) #27	Flrt1 (ENSJJAG00000010623) #28	ENSJJAG00000009747	Stip1 (ENSJJAG00000011045) #30	Fermt3 (ENSJJAG00000016496) #31	Trpt1 (ENSJJAG00000010855) #32	Nudt22 (ENSJJAG00000021699) #33	Dnajc4 (ENSJJAG00000014463) #34	Vegfb (ENSJJAG00000005482) #35	ENSJJAG00000023732 #36	Plcb3 (ENSJJAG00000022408)
Kangaroo rat	MODERN SPECIES	373									ENSDORG00000028351 #12	Lgals12 (ENSDORG00000012907) #13	Plaat3 (ENSDORG00000010379) #16	Atl3 (ENSDORG00000010381) #17	ENSDORG00000004345 #19	Zfta (ENSDORG00000025999) #20	Spindoc (ENSDORG00000007875) #21	Mark2 (ENSDORG00000012213) #22	Rcor2 (ENSDORG00000012215) #23	Naa40 (ENSDORG00000011271) #24	Cox8a (ENSDORG00000029070) #25	Otub1 (ENSDORG00000011273) #26	Flrt1 (ENSDORG00000025890) #28	Macrod1 (ENSDORG00000011275) #27	Stip1 (ENSDORG00000001609) #30	Fermt3 (ENSDORG00000001620) #31	Trpt1 (ENSDORG00000001624) #32	Nudt22 (ENSDORG00000001627) #33	Dnajc4 (ENSDORG00000001628) #34	Vegfb (ENSDORG00000001629) #35	ENSDORG00000001630 #36	ENSDORG00000001631 #37	Plcb3 (ENSDORG00000001633)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155031 #22
Hedgehog	MODERN SPECIES	6890																MARK2 (ENSEEUG00000009934) #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT01080000257483	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Laurasiatheria_c	DUPLICATION
Laurasiatheria_c	ANCESTRAL SPECIES																	ENSGT00940000155031.c #22
Equus	ANCESTRAL SPECIES	9	ENSGT01040000243572	ENSGT00390000017639	ENSGT00940000155309	ENSGT00940000154445.c.a.e	ENSGT00940000155109.b	ENSGT00440000039001	ENSGT00940000156276	ENSGT00390000014563.a.b	ENSGT00950000183033.a.a.d	ENSGT00940000156416	ENSGT01100000266276	ENSGT00390000013594	ENSGT00940000154939	ENSGT00940000153335.a.b	ENSGT00940000159995	ENSGT00940000155031.c #22	ENSGT00390000014794.b	ENSGT00390000004181	ENSGT00940000161078.m	ENSGT00940000157470	ENSGT00530000063713.a	ENSGT00390000014082.b	ENSGT00940000158394	ENSGT00390000000984	ENSGT00940000158210	ENSGT00940000158794	ENSGT01030000234543.B.f	ENSGT00940000160543	ENSGT00940000159378	ENSGT00940000159406	ENSGT00940000158924.a
Horse	MODERN SPECIES		ENSECAG00000021793	ENSECAG00000054458	ZWINT (ENSECAG00000000633)	ENSECAG00000007551	IPMK (ENSECAG00000008002)	CISD1 (ENSECAG00000008892)	UBE2D1 (ENSECAG00000032782)	BICC1 (ENSECAG00000013979)	PHYHIPL (ENSECAG00000019566)	FAM13C (ENSECAG00000000046)	SLC16A9 (ENSECAG00000000847)	CCDC6 (ENSECAG00000006268)	ANK3 (ENSECAG00000009700)	CDK1 (ENSECAG00000009716)	RHOBTB1 (ENSECAG00000011559)	ENSECAG00000036439 #22	TMEM26 (ENSECAG00000017826)	CABCOCO1 (ENSECAG00000018759)	ENSECAG00000053960	ARID5B (ENSECAG00000019795)	RTKN2 (ENSECAG00000000259)	ENSECAG00000053502	ZNF365 (ENSECAG00000010245)	ADO (ENSECAG00000010803)	EGR2 (ENSECAG00000010818)	NRBF2 (ENSECAG00000011036)	JMJD1C (ENSECAG00000012941)	ENSECAG00000054871	REEP3 (ENSECAG00000019662)	CTNNA3 (ENSECAG00000008248)	LRRTM3 (ENSECAG00000002417)
Donkey	MODERN SPECIES	11	ZWINT (ENSEASG00005013748)	ENSEASG00005030948	IPMK (ENSEASG00005013756)	ENSEASG00005032662	UBE2D1 (ENSEASG00005013766)	TFAM (ENSEASG00005032581)	BICC1 (ENSEASG00005013784)	PHYHIPL (ENSEASG00005027284)	FAM13C (ENSEASG00005013804)	SLC16A9 (ENSEASG00005013808)	ENSEASG00005028425	CCDC6 (ENSEASG00005013813)	ANK3 (ENSEASG00005013882)	CDK1 (ENSEASG00005015011)	RHOBTB1 (ENSEASG00005015015)	ENSEASG00005015028 #22	TMEM26 (ENSEASG00005033405)	CABCOCO1 (ENSEASG00005015036)	ARID5B (ENSEASG00005015041)	RTKN2 (ENSEASG00005033911)	ZNF365 (ENSEASG00005015045)	ADO (ENSEASG00005015047)	EGR2 (ENSEASG00005015048)	NRBF2 (ENSEASG00005031871)	JMJD1C (ENSEASG00005015055)	REEP3 (ENSEASG00005015059)	ENSEASG00005015063	CTNNA3 (ENSEASG00005015093)	ENSEASG00005033938	LRRTM3 (ENSEASG00005015340)	DNAJC12 (ENSEASG00005015344)
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00940000157004.a.b.a	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000164763 #7	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031.d #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031.d #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031.d #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Greater horseshoe bat	MODERN SPECIES	2	WDR74 (ENSRFEG00010011575)	SLC3A2 (ENSRFEG00010011338)	CHRM1 (ENSRFEG00010011318)	ENSRFEG00010011298	SLC22A6 (ENSRFEG00010011255)	SLC22A8 (ENSRFEG00010010746)	SLC22A9 (ENSRFEG00010010675) #11	ENSRFEG00010010520 #12	LGALS12 (ENSRFEG00010010237) #13	ENSRFEG00010010178 #14	ENSRFEG00010010034 #14	ATL3 (ENSRFEG00010009831) #17	RTN3 (ENSRFEG00010009595) #19	ZFTA (ENSRFEG00010009546) #20	SPINDOC (ENSRFEG00010009495) #21	MARK2 (ENSRFEG00010009280) #22	RCOR2 (ENSRFEG00010009161) #23	NAA40 (ENSRFEG00010009063) #24	COX8A (ENSRFEG00010009021) #25	OTUB1 (ENSRFEG00010008961) #26	FLRT1 (ENSRFEG00010008949) #28	MACROD1 (ENSRFEG00010008886) #27	STIP1 (ENSRFEG00010008672) #30	FERMT3 (ENSRFEG00010008635) #31	TRPT1 (ENSRFEG00010008580) #32	NUDT22 (ENSRFEG00010008427) #33	DNAJC4 (ENSRFEG00010008326) #34	VEGFB (ENSRFEG00010008280) #35	FKBP2 (ENSRFEG00010008165) #36	PPP1R14B (ENSRFEG00010008083) #37	PLCB3 (ENSRFEG00010007782)
Microbat	MODERN SPECIES	1627									ENSMLUG00000030657 #14	ENSMLUG00000030115 #14	ENSMLUG00000010768 #15	ATL3 (ENSMLUG00000013662) #17	RTN3 (ENSMLUG00000013670) #19	ZFTA (ENSMLUG00000029718) #20	SPINDOC (ENSMLUG00000017548) #21	MARK2 (ENSMLUG00000012201) #22	RCOR2 (ENSMLUG00000023326) #23	NAA40 (ENSMLUG00000012222) #24	COX8A (ENSMLUG00000012232) #25	ENSMLUG00000012235 #26
Megabat	MODERN SPECIES	2498																MARK2 (ENSPVAG00000017092) #22	RCOR2 (ENSPVAG00000017095) #23	NAA40 (ENSPVAG00000017097) #24	COX8A (ENSPVAG00000017098) #25	OTUB1 (ENSPVAG00000017099) #26	ENSPVAG00000017102 #27	FLRT1 (ENSPVAG00000017103) #28	STIP1 (ENSPVAG00000017105) #30	FERMT3 (ENSPVAG00000017107) #31	ENSPVAG00000017109 #32	NUDT22 (ENSPVAG00000017111) #33	ENSPVAG00000017114 #34	VEGFB (ENSPVAG00000017116) #35	FKBP2 (ENSPVAG00000017119) #36	PPP1R14B (ENSPVAG00000017120) #37	PLCB3 (ENSPVAG00000017121)
Equus	ANCESTRAL SPECIES	11	ENSGT00940000163667 #10	ENSGT00940000161239.n.a #11	ENSGT00940000161239.m.b #11	ENSGT00940000161239.m.a #11	ENSGT00940000161239.n.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878.c.b #14	ENSGT00940000162878.c.a.a #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031.d #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00390000010740
Donkey	MODERN SPECIES	8	ENSEASG00005029445 #11	ENSEASG00005037691 #11	ENSEASG00005037448 #11	ENSEASG00005012059 #12	LGALS12 (ENSEASG00005026393) #13	ENSEASG00005020101 #14	ENSEASG00005031505 #15	ENSEASG00005020110 #14	ENSEASG00005030403 #14	PLAAT2 (ENSEASG00005038782) #15	ENSEASG00005020091 #16	ATL3 (ENSEASG00005020084) #17	RTN3 (ENSEASG00005020077) #19	ZFTA (ENSEASG00005020064) #20	SPINDOC (ENSEASG00005020056) #21	MARK2 (ENSEASG00005020040) #22	RCOR2 (ENSEASG00005020018) #23	NAA40 (ENSEASG00005036108) #24	OTUB1 (ENSEASG00005020008) #26	MACROD1 (ENSEASG00005019999) #27	FLRT1 (ENSEASG00005020006) #28	ENSEASG00005020002	STIP1 (ENSEASG00005019992) #30	FERMT3 (ENSEASG00005019986) #31	TRPT1 (ENSEASG00005019983) #32	NUDT22 (ENSEASG00005019979) #33	ENSEASG00005019977 #35	FKBP2 (ENSEASG00005019973) #36	ENSEASG00005019971 #37	ENSEASG00005019964	ENSEASG00005025253
Horse	MODERN SPECIES	3	ENSECAG00000055620	ENSECAG00000030790 #11	ENSECAG00000049087 #11	PLAAT5 (ENSECAG00000019603) #12	LGALS12 (ENSECAG00000019637) #13	ENSECAG00000032959 #14	ENSECAG00000038997 #15	ENSECAG00000054862	ENSECAG00000036003 #14	ENSECAG00000031322 #14	ENSECAG00000019767 #15	PLAAT3 (ENSECAG00000019777) #16	ATL3 (ENSECAG00000019843) #17	RTN3 (ENSECAG00000021359) #19	ZFTA (ENSECAG00000029864) #20	MARK2 (ENSECAG00000021754) #22	RCOR2 (ENSECAG00000023033) #23	NAA40 (ENSECAG00000000898) #24	OTUB1 (ENSECAG00000033949) #26	MACROD1 (ENSECAG00000006792) #27	FLRT1 (ENSECAG00000031616) #28	STIP1 (ENSECAG00000006942) #30	FERMT3 (ENSECAG00000008107) #31	TRPT1 (ENSECAG00000009917) #32	NUDT22 (ENSECAG00000009994) #33	DNAJC4 (ENSECAG00000037429) #34	ENSECAG00000010539 #35	FKBP2 (ENSECAG00000010601) #36	PPP1R14B (ENSECAG00000010628) #37	PLCB3 (ENSECAG00000011700)	BAD (ENSECAG00000014950)
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Felidae	ANCESTRAL SPECIES		ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Panthera	ANCESTRAL SPECIES	18	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000163667 #10	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Tiger	MODERN SPECIES	369	WDR74 (ENSPTIG00000016962)	SLC3A2 (ENSPTIG00000012539)	CHRM1 (ENSPTIG00000007102)	ENSPTIG00000007098	SLC22A6 (ENSPTIG00000008570)	SLC22A8 (ENSPTIG00000019571)	ENSPTIG00000006918 #11	ENSPTIG00000019174 #10	SLC22A9 (ENSPTIG00000018254) #11	PLAAT5 (ENSPTIG00000016710) #12	LGALS12 (ENSPTIG00000013920) #13	PLAAT3 (ENSPTIG00000012106) #16	ATL3 (ENSPTIG00000009817) #17	ENSPTIG00000008262 #19	SPINDOC (ENSPTIG00000007294) #21	MARK2 (ENSPTIG00000013108) #22	RCOR2 (ENSPTIG00000012240) #23	NAA40 (ENSPTIG00000010415) #24	COX8A (ENSPTIG00000009882) #25	ENSPTIG00000009338 #26	STIP1 (ENSPTIG00000000613) #30	FERMT3 (ENSPTIG00000020168) #31	TRPT1 (ENSPTIG00000018872) #32	NUDT22 (ENSPTIG00000018201) #33	DNAJC4 (ENSPTIG00000016001) #34	VEGFB (ENSPTIG00000014509) #35	FKBP2 (ENSPTIG00000013635) #36	ENSPTIG00000012773 #37	PLCB3 (ENSPTIG00000006263)	BAD (ENSPTIG00000005517)	ENSPTIG00000000731
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000163667 #10	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
leopard	MODERN SPECIES	64	SLC3A2 (ENSPPRG00000001175)	CHRM1 (ENSPPRG00000015634)	ENSPPRG00000015614	ENSPPRG00000015606	SLC22A6 (ENSPPRG00000000682)	SLC22A8 (ENSPPRG00000023668)	ENSPPRG00000015426 #11	SLC22A9 (ENSPPRG00000019825) #11	PLAAT5 (ENSPPRG00000017226) #12	LGALS12 (ENSPPRG00000015392) #13	PLAAT3 (ENSPPRG00000013267) #16	ATL3 (ENSPPRG00000012865) #17	ENSPPRG00000012195 #19	ZFTA (ENSPPRG00000011316) #20	SPINDOC (ENSPPRG00000010767) #21	MARK2 (ENSPPRG00000009691) #22	RCOR2 (ENSPPRG00000005918) #23	NAA40 (ENSPPRG00000004526) #24	COX8A (ENSPPRG00000004014) #25	ENSPPRG00000003587 #26	FLRT1 (ENSPPRG00000015154) #28	ENSPPRG00000002564 #27	STIP1 (ENSPPRG00000002286) #30	FERMT3 (ENSPPRG00000000519) #31	TRPT1 (ENSPPRG00000022870) #32	NUDT22 (ENSPPRG00000014703) #33	DNAJC4 (ENSPPRG00000013456) #34	VEGFB (ENSPPRG00000012528) #35	ENSPPRG00000012406 #36	ENSPPRG00000012134 #36	PPP1R14B (ENSPPRG00000011369) #37
lion	MODERN SPECIES	10	WDR74 (ENSPLOG00000008195)	SLC3A2 (ENSPLOG00000008401)	CHRM1 (ENSPLOG00000008442)	SLC22A6 (ENSPLOG00000008482)	ENSPLOG00000008657 #11	ENSPLOG00000008688 #10	SLC22A9 (ENSPLOG00000008724) #11	ENSPLOG00000008882 #12	LGALS12 (ENSPLOG00000009103) #13	ENSPLOG00000009308 #14	PLAAT3 (ENSPLOG00000009329) #16	ATL3 (ENSPLOG00000009379) #17	RTN3 (ENSPLOG00000009548) #19	ZFTA (ENSPLOG00000009772) #20	SPINDOC (ENSPLOG00000009801) #21	MARK2 (ENSPLOG00000010018) #22	RCOR2 (ENSPLOG00000010654) #23	NAA40 (ENSPLOG00000010750) #24	COX8A (ENSPLOG00000010835) #25	ENSPLOG00000010881 #26	MACROD1 (ENSPLOG00000011048) #27	FLRT1 (ENSPLOG00000011165) #28	STIP1 (ENSPLOG00000011215) #30	FERMT3 (ENSPLOG00000011394) #31	TRPT1 (ENSPLOG00000011484) #32	NUDT22 (ENSPLOG00000011726) #33	DNAJC4 (ENSPLOG00000011801) #34	VEGFB (ENSPLOG00000011866) #35	FKBP2 (ENSPLOG00000012018) #36	PPP1R14B (ENSPLOG00000012105) #37	PLCB3 (ENSPLOG00000012272)
Cat	MODERN SPECIES	241	CHRM1 (ENSFCAG00000000336)	ENSFCAG00000035000	SLC22A6 (ENSFCAG00000005247)	SLC22A8 (ENSFCAG00000005255)	ENSFCAG00000041221 #10	SLC22A25 (ENSFCAG00000018565) #8	PLAAT5 (ENSFCAG00000030094) #12	LGALS12 (ENSFCAG00000014648) #13	ENSFCAG00000051640 #14	PLAAT2 (ENSFCAG00000036450) #15	PLAAT3 (ENSFCAG00000001309) #16	ATL3 (ENSFCAG00000031360) #17	RTN3 (ENSFCAG00000023202) #19	CD1H11orf95 (ENSFCAG00000032639) #20	SPINDOC (ENSFCAG00000014649) #21	MARK2 (ENSFCAG00000014652) #22	RCOR2 (ENSFCAG00000014656) #23	NAA40 (ENSFCAG00000014660) #24	COX8A (ENSFCAG00000014662) #25	OTUB1 (ENSFCAG00000029184) #26	MACROD1 (ENSFCAG00000046598) #27	FLRT1 (ENSFCAG00000014665) #28	STIP1 (ENSFCAG00000005937) #30	FERMT3 (ENSFCAG00000005939) #31	TRPT1 (ENSFCAG00000024621) #32	NUDT22 (ENSFCAG00000005943) #33	DNAJC4 (ENSFCAG00000005944) #34	VEGFB (ENSFCAG00000005946) #35	FKBP2 (ENSFCAG00000029410) #36	PPP1R14B (ENSFCAG00000030667) #37	PLCB3 (ENSFCAG00000000507)
Caniformia	ANCESTRAL SPECIES	21	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000162660.b.e.b	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
American mink	MODERN SPECIES	104												ATL3 (ENSNVIG00000020674) #17	RTN3 (ENSNVIG00000020533) #19	ZFTA (ENSNVIG00000020519) #20	SPINDOC (ENSNVIG00000020503) #21	MARK2 (ENSNVIG00000020056) #22	RCOR2 (ENSNVIG00000020036) #23	NAA40 (ENSNVIG00000019988) #24	COX8A (ENSNVIG00000019973) #25	OTUB1 (ENSNVIG00000019928) #26	FLRT1 (ENSNVIG00000019914) #28	MACROD1 (ENSNVIG00000019904) #27	ENSNVIG00000019865 #30	FERMT3 (ENSNVIG00000019800) #31	TRPT1 (ENSNVIG00000019750) #32	NUDT22 (ENSNVIG00000019719) #33	DNAJC4 (ENSNVIG00000019687) #34	VEGFB (ENSNVIG00000019672) #35	FKBP2 (ENSNVIG00000019655) #36	PPP1R14B (ENSNVIG00000019636) #37	PLCB3 (ENSNVIG00000019582)
Ferret	MODERN SPECIES	314	WDR74 (ENSMPUG00000013557)	SLC3A2 (ENSMPUG00000013553)	CHRM1 (ENSMPUG00000019995)	SLC22A6 (ENSMPUG00000013551)	SLC22A8 (ENSMPUG00000013544)	ENSMPUG00000013536 #10	SLC22A9 (ENSMPUG00000013528) #11	PLAAT5 (ENSMPUG00000013509) #12	LGALS12 (ENSMPUG00000013482) #13	ENSMPUG00000013479 #16	ENSMPUG00000013476 #16	ATL3 (ENSMPUG00000013363) #17	ENSMPUG00000013356 #19	ZFTA (ENSMPUG00000013353) #20	SPINDOC (ENSMPUG00000013338) #21	MARK2 (ENSMPUG00000013326) #22	RCOR2 (ENSMPUG00000013320) #23	NAA40 (ENSMPUG00000013317) #24	OTUB1 (ENSMPUG00000013314) #26	FLRT1 (ENSMPUG00000019993) #28	MACROD1 (ENSMPUG00000013309) #27	ENSMPUG00000013306	STIP1 (ENSMPUG00000013297) #30	FERMT3 (ENSMPUG00000013280) #31	TRPT1 (ENSMPUG00000013272) #32	DNAJC4 (ENSMPUG00000013266) #34	VEGFB (ENSMPUG00000013232) #35	FKBP2 (ENSMPUG00000013228) #36	PPP1R14B (ENSMPUG00000013208) #37	PLCB3 (ENSMPUG00000012959)	BAD (ENSMPUG00000012954)
Ursidae	ANCESTRAL SPECIES	2	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000162660.b.e.b	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Giant Panda	MODERN SPECIES	7	STX5 (ENSAMEG00000006206)	WDR74 (ENSAMEG00000006160)	SLC3A2 (ENSAMEG00000006140)	CHRM1 (ENSAMEG00000020258)	SLC22A6 (ENSAMEG00000006012)	SLC22A8 (ENSAMEG00000005991)	SLC22A10 (ENSAMEG00000005956) #10	SLC22A9 (ENSAMEG00000005817) #11	LGALS12 (ENSAMEG00000027710) #13	ENSAMEG00000018150	PLAAT3 (ENSAMEG00000023459) #16	ATL3 (ENSAMEG00000018141) #17	RTN3 (ENSAMEG00000018135) #19	ZFTA (ENSAMEG00000025175) #20	SPINDOC (ENSAMEG00000018132) #21	MARK2 (ENSAMEG00000018111) #22	RCOR2 (ENSAMEG00000018101) #23	NAA40 (ENSAMEG00000030824) #24	COX8A (ENSAMEG00000026424) #25	OTUB1 (ENSAMEG00000018084) #26	MACROD1 (ENSAMEG00000017979) #27	ENSAMEG00000026299	FLRT1 (ENSAMEG00000019306) #28	STIP1 (ENSAMEG00000018068) #30	FERMT3 (ENSAMEG00000018044) #31	TRPT1 (ENSAMEG00000018040) #32	NUDT22 (ENSAMEG00000018038) #33	DNAJC4 (ENSAMEG00000018035) #34	ENSAMEG00000028477 #35	ENSAMEG00000018025 #36	PPP1R14B (ENSAMEG00000018019) #37
Ursus	ANCESTRAL SPECIES	21										ENSGT00940000162660.b.e.b	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Polar bear	MODERN SPECIES	328											ENSUMAG00000000212	PLAAT3 (ENSUMAG00000000365) #16	ATL3 (ENSUMAG00000000372) #17	ENSUMAG00000000382 #19	SPINDOC (ENSUMAG00000000388) #21	MARK2 (ENSUMAG00000000439) #22	RCOR2 (ENSUMAG00000000474) #23	NAA40 (ENSUMAG00000000527) #24	COX8A (ENSUMAG00000000536) #25	ENSUMAG00000000546	FLRT1 (ENSUMAG00000000548) #28	ENSUMAG00000000554 #27	STIP1 (ENSUMAG00000000589) #30	FERMT3 (ENSUMAG00000001141) #31	TRPT1 (ENSUMAG00000001410) #32	NUDT22 (ENSUMAG00000001420) #33	DNAJC4 (ENSUMAG00000001427) #34	VEGFB (ENSUMAG00000001433) #35	ENSUMAG00000001463 #36	PPP1R14B (ENSUMAG00000001474) #37	PLCB3 (ENSUMAG00000001701)
American black bear	MODERN SPECIES	159															SPINDOC (ENSUAMG00000015259) #21	MARK2 (ENSUAMG00000015247) #22	RCOR2 (ENSUAMG00000015239) #23	NAA40 (ENSUAMG00000015235) #24	COX8A (ENSUAMG00000015233) #25	OTUB1 (ENSUAMG00000015232) #26	FLRT1 (ENSUAMG00000015231) #28	MACROD1 (ENSUAMG00000015226) #27	ENSUAMG00000015221 #30	FERMT3 (ENSUAMG00000015213) #31	TRPT1 (ENSUAMG00000015208) #32	NUDT22 (ENSUAMG00000015205) #33	DNAJC4 (ENSUAMG00000015203) #34	VEGFB (ENSUAMG00000015198) #35	FKBP2 (ENSUAMG00000015197) #36	PPP1R14B (ENSUAMG00000015193) #37	PLCB3 (ENSUAMG00000015187)
Canidae	ANCESTRAL SPECIES	13	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.a #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Red fox	MODERN SPECIES	49	CHRM1 (ENSVVUG00000029823)	SLC22A6 (ENSVVUG00000029822)	SLC22A8 (ENSVVUG00000029821)	ENSVVUG00000029820 #11	SLC22A10 (ENSVVUG00000029819) #10	SLC22A9 (ENSVVUG00000029817) #11	ENSVVUG00000029813 #12	LGALS12 (ENSVVUG00000029809) #13	RARRES3 (ENSVVUG00000029807) #14	ENSVVUG00000029804 #15	PLA2G16 (ENSVVUG00000029803) #16	ATL3 (ENSVVUG00000029799) #17	RTN3 (ENSVVUG00000029798) #19	ZFTA (ENSVVUG00000029797) #20	SPINDOC (ENSVVUG00000029796) #21	MARK2 (ENSVVUG00000029791) #22	RCOR2 (ENSVVUG00000029787) #23	NAA40 (ENSVVUG00000029786) #24	ENSVVUG00000029785 #26	FLRT1 (ENSVVUG00000029784) #28	MACROD1 (ENSVVUG00000029782) #27	STIP1 (ENSVVUG00000029780) #30	FERMT3 (ENSVVUG00000029775) #31	TRPT1 (ENSVVUG00000029774) #32	NUDT22 (ENSVVUG00000029773) #33	DNAJC4 (ENSVVUG00000029772) #34	VEGFB (ENSVVUG00000029771) #35	FKBP2 (ENSVVUG00000029770) #36	PPP1R14B (ENSVVUG00000029769) #37	PLCB3 (ENSVVUG00000029768)	BAD (ENSVVUG00000029767)
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667 #10	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.c #15	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d.e #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.a #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Dingo	MODERN SPECIES	36	SLC22A8 (ENSCAFG00020013254)	ENSCAFG00020013304 #11	SLC22A10 (ENSCAFG00020013312) #10	ENSCAFG00020013569	SLC22A9 (ENSCAFG00020013593) #11	ENSCAFG00020013852 #12	LGALS12 (ENSCAFG00020013880) #13	PLAAT4 (ENSCAFG00020013883) #14	ENSCAFG00020013885 #15	PLAAT3 (ENSCAFG00020013886) #16	ATL3 (ENSCAFG00020013890) #17	ENSCAFG00020013937	ENSCAFG00020013944 #19	ZFTA (ENSCAFG00020013984) #20	SPINDOC (ENSCAFG00020013994) #21	MARK2 (ENSCAFG00020014004) #22	RCOR2 (ENSCAFG00020014030) #23	NAA40 (ENSCAFG00020014034) #24	ENSCAFG00020014039 #25	OTUB1 (ENSCAFG00020014040) #26	MACROD1 (ENSCAFG00020014046) #27	FLRT1 (ENSCAFG00020014058) #28	ENSCAFG00020014064 #30	FERMT3 (ENSCAFG00020014088) #31	TRPT1 (ENSCAFG00020014101) #32	NUDT22 (ENSCAFG00020014104) #33	DNAJC4 (ENSCAFG00020014110) #34	VEGFB (ENSCAFG00020014120) #35	FKBP2 (ENSCAFG00020014124) #36	ENSCAFG00020014127 #37	PLCB3 (ENSCAFG00020014131)
Dog	MODERN SPECIES	9	ENSCAFG00845007123	ENSCAFG00845007087 #11	ENSCAFG00845007034	SLC22A10 (ENSCAFG00845006977) #10	SLC22A9 (ENSCAFG00845006786) #11	PLAAT5 (ENSCAFG00845006736) #12	LGALS12 (ENSCAFG00845006674) #13	PLAAT4 (ENSCAFG00845006599) #14	ENSCAFG00845006559 #15	PLAAT3 (ENSCAFG00845006522) #16	ENSCAFG00845006483	ATL3 (ENSCAFG00845006281) #17	RTN3 (ENSCAFG00845006009) #19	ZFTA (ENSCAFG00845005900) #20	SPINDOC (ENSCAFG00845005829) #21	MARK2 (ENSCAFG00845030887) #22	RCOR2 (ENSCAFG00845030849) #23	COX8A (ENSCAFG00845030809) #24	OTUB1 (ENSCAFG00845030788) #26	FLRT1 (ENSCAFG00845030783) #28	MACROD1 (ENSCAFG00845030770) #27	ENSCAFG00845030763 #30	FERMT3 (ENSCAFG00845030758) #31	TRPT1 (ENSCAFG00845030748) #32	NUDT22 (ENSCAFG00845030736) #33	DNAJC4 (ENSCAFG00845030731) #34	ENSCAFG00845030726 #35	FKBP2 (ENSCAFG00845030714) #36	ENSCAFG00845030695 #37	PLCB3 (ENSCAFG00845030670)	BAD (ENSCAFG00845030649)
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000162660.b.e.b	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Suina	ANCESTRAL SPECIES	14	ENSGT01090000260892	ENSGT01080000257483	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Pig	MODERN SPECIES	10	ENSSSCG00000025413 #10	ENSSSCG00000061902 #10	ENSSSCG00000060619 #10	ENSSSCG00000029248 #10	ENSSSCG00000028537 #11	ENSSSCG00000027453 #11	ENSSSCG00000013057 #11	PLAAT5 (ENSSSCG00000061988) #12	LGALS12 (ENSSSCG00000013056) #13	PLAAT3 (ENSSSCG00000026914) #16	ATL3 (ENSSSCG00000013054) #17	ENSSSCG00000013052 #19	ZFTA (ENSSSCG00000031666) #20	ENSSSCG00000013051	SPINDOC (ENSSSCG00000013048) #21	MARK2 (ENSSSCG00000013050) #22	RCOR2 (ENSSSCG00000013049) #23	NAA40 (ENSSSCG00000022687) #24	COX8A (ENSSSCG00000013046) #25	OTUB1 (ENSSSCG00000013045) #26	FLRT1 (ENSSSCG00000013044) #28	MACROD1 (ENSSSCG00000013043) #27	STIP1 (ENSSSCG00000021620) #30	FERMT3 (ENSSSCG00000013041) #31	TRPT1 (ENSSSCG00000013040) #32	NUDT22 (ENSSSCG00000013039) #33	DNAJC4 (ENSSSCG00000013038) #34	VEGFB (ENSSSCG00000054506) #35	FKBP2 (ENSSSCG00000033757) #36	PPP1R14B (ENSSSCG00000037999) #37	PLCB3 (ENSSSCG00000013034)
Chacoan peccary	MODERN SPECIES	920	CHRM1 (ENSCWAG00000018122)	ENSCWAG00000018111	SLC22A6 (ENSCWAG00000017692)	SLC22A8 (ENSCWAG00000017452)	ENSCWAG00000017311 #10	SLC22A9 (ENSCWAG00000017234) #11	PLAAT5 (ENSCWAG00000017146) #12	ENSCWAG00000017126	LGALS12 (ENSCWAG00000017018) #13	PLAAT4 (ENSCWAG00000016973) #14	PLAAT3 (ENSCWAG00000016923) #16	ATL3 (ENSCWAG00000016882) #17	RTN3 (ENSCWAG00000016492) #19	ZFTA (ENSCWAG00000016412) #20	SPINDOC (ENSCWAG00000016361) #21	MARK2 (ENSCWAG00000016084) #22	RCOR2 (ENSCWAG00000016039) #23	NAA40 (ENSCWAG00000015970) #24	COX8A (ENSCWAG00000015938) #25	OTUB1 (ENSCWAG00000015882) #26
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Camelidae	ANCESTRAL SPECIES	18											ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Arabian camel	MODERN SPECIES	1	ENSCDRG00005020082	SLC22A6 (ENSCDRG00005020053)	SLC22A8 (ENSCDRG00005020013)	ENSCDRG00005019998 #10	ENSCDRG00005019949 #10	ENSCDRG00005019931 #11	ENSCDRG00005019903 #11	ENSCDRG00005019804 #12	LGALS12 (ENSCDRG00005019752) #13	ENSCDRG00005019739	PLAAT3 (ENSCDRG00005019659) #16	ATL3 (ENSCDRG00005019542) #17	RTN3 (ENSCDRG00005019397) #19	ZFTA (ENSCDRG00005019367) #20	SPINDOC (ENSCDRG00005019332) #21	MARK2 (ENSCDRG00005019188) #22	RCOR2 (ENSCDRG00005019145) #23	NAA40 (ENSCDRG00005019104) #24	COX8A (ENSCDRG00005019088) #25	OTUB1 (ENSCDRG00005018880) #26	FLRT1 (ENSCDRG00005018850) #28	MACROD1 (ENSCDRG00005018807) #27	STIP1 (ENSCDRG00005018758) #30	FERMT3 (ENSCDRG00005018709) #31	TRPT1 (ENSCDRG00005018663) #32	NUDT22 (ENSCDRG00005018604) #33	DNAJC4 (ENSCDRG00005018557) #34	VEGFB (ENSCDRG00005018496) #35	FKBP2 (ENSCDRG00005018432) #36	ENSCDRG00005018394 #37	PLCB3 (ENSCDRG00005018129)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000162301	ENSGT01090000260892	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.a #10	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.c #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Blue whale	MODERN SPECIES	19	SLC3A2 (ENSBMSG00010008809)	CHRM1 (ENSBMSG00010008857)	ENSBMSG00010008869	SLC22A6 (ENSBMSG00010008894)	SLC22A8 (ENSBMSG00010008957)	ENSBMSG00010008993 #10	ENSBMSG00010009002 #10	SLC22A9 (ENSBMSG00010009021) #11	PLAAT5 (ENSBMSG00010009039) #12	LGALS12 (ENSBMSG00010009076) #13	PLAAT3 (ENSBMSG00010009143) #16	ATL3 (ENSBMSG00010009168) #17	RTN3 (ENSBMSG00010009260) #19	ZFTA (ENSBMSG00010009395) #20	SPINDOC (ENSBMSG00010009408) #21	MARK2 (ENSBMSG00010009492) #22	RCOR2 (ENSBMSG00010010142) #23	NAA40 (ENSBMSG00010010195) #24	ENSBMSG00010010232 #25	OTUB1 (ENSBMSG00010010263) #26	MACROD1 (ENSBMSG00010010321) #27	FLRT1 (ENSBMSG00010010366) #28	STIP1 (ENSBMSG00010010388) #30	FERMT3 (ENSBMSG00010010420) #31	TRPT1 (ENSBMSG00010010488) #32	NUDT22 (ENSBMSG00010010592) #33	DNAJC4 (ENSBMSG00010010624) #34	VEGFB (ENSBMSG00010010670) #35	ENSBMSG00010010693 #36	ENSBMSG00010010781	PLCB3 (ENSBMSG00010010890)
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000162301	ENSGT01090000260892	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.c #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000162301	ENSGT01090000260892	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.c #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000162301	ENSGT01090000260892	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.c #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000156646	ENSGT00940000162301	ENSGT01090000260892	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.b #10	ENSGT00940000163667.a #10	ENSGT00940000161239.k.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.c #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Beluga whale	MODERN SPECIES	7	CHRM1 (ENSDLEG00000017296)	ENSDLEG00000017288	SLC22A6 (ENSDLEG00000017243)	SLC22A8 (ENSDLEG00000017206)	ENSDLEG00000017182 #10	ENSDLEG00000017168 #10	SLC22A9 (ENSDLEG00000017119) #11	ENSDLEG00000017101 #12	ENSDLEG00000017093	LGALS12 (ENSDLEG00000017077) #13	PLAAT3 (ENSDLEG00000017064) #16	ATL3 (ENSDLEG00000017041) #17	RTN3 (ENSDLEG00000017027) #19	ZFTA (ENSDLEG00000017003) #20	CUNH11orf84 (ENSDLEG00000016974) #21	MARK2 (ENSDLEG00000016893) #22	RCOR2 (ENSDLEG00000016867) #23	NAA40 (ENSDLEG00000016844) #24	COX8A (ENSDLEG00000016831) #25	ENSDLEG00000016822	FLRT1 (ENSDLEG00000016815) #28	MACROD1 (ENSDLEG00000016721) #27	STIP1 (ENSDLEG00000016691) #30	FERMT3 (ENSDLEG00000016665) #31	TRPT1 (ENSDLEG00000016647) #32	NUDT22 (ENSDLEG00000016637) #33	DNAJC4 (ENSDLEG00000016618) #34	VEGFB (ENSDLEG00000016605) #35	ENSDLEG00000016593 #36	PPP1R14B (ENSDLEG00000016552) #37	PLCB3 (ENSDLEG00000016212)
Narwhal	MODERN SPECIES	314	WDR74 (ENSMMNG00015020091)	SLC3A2 (ENSMMNG00015020226)	ENSMMNG00015015886	SLC22A6 (ENSMMNG00015015915)	SLC22A8 (ENSMMNG00015015986)	ENSMMNG00015016169 #10	ENSMMNG00015016196 #10	SLC22A9 (ENSMMNG00015016223) #11	ENSMMNG00015016290 #12	LGALS12 (ENSMMNG00015016331) #13	PLAAT3 (ENSMMNG00015016480) #16	ATL3 (ENSMMNG00015016525) #17	RTN3 (ENSMMNG00015016643) #19	ZFTA (ENSMMNG00015016857) #20	SPINDOC (ENSMMNG00015016898) #21	MARK2 (ENSMMNG00015017076) #22	RCOR2 (ENSMMNG00015017683) #23	NAA40 (ENSMMNG00015017755) #24	COX8A (ENSMMNG00015017831) #25	ENSMMNG00015017860 #26	MACROD1 (ENSMMNG00015017943) #27	FLRT1 (ENSMMNG00015018010) #28	STIP1 (ENSMMNG00015018037) #30	FERMT3 (ENSMMNG00015018113) #31	TRPT1 (ENSMMNG00015018178) #32	NUDT22 (ENSMMNG00015018228) #33	DNAJC4 (ENSMMNG00015018277) #34	VEGFB (ENSMMNG00015018347) #35	FKBP2 (ENSMMNG00015018380) #36	PPP1R14B (ENSMMNG00015018437) #37	PLCB3 (ENSMMNG00015018509)
Vaquita	MODERN SPECIES	19	WDR74 (ENSPSNG00000019672)	SLC3A2 (ENSPSNG00000019788)	CHRM1 (ENSPSNG00000019868)	ENSPSNG00000019881	ENSPSNG00000019902	SLC22A6 (ENSPSNG00000019972)	SLC22A8 (ENSPSNG00000020185)	ENSPSNG00000020372 #10	ENSPSNG00000020456 #10	SLC22A9 (ENSPSNG00000020492) #11	LGALS12 (ENSPSNG00000020749) #13	ATL3 (ENSPSNG00000004187) #17	RTN3 (ENSPSNG00000004269) #19	ZFTA (ENSPSNG00000004374) #20	SPINDOC (ENSPSNG00000004396) #21	MARK2 (ENSPSNG00000004479) #22	RCOR2 (ENSPSNG00000004582) #23	NAA40 (ENSPSNG00000004631) #24	COX8A (ENSPSNG00000004670) #25	OTUB1 (ENSPSNG00000004699) #26	MACROD1 (ENSPSNG00000004769) #27	FLRT1 (ENSPSNG00000004816) #28	STIP1 (ENSPSNG00000004844) #30	FERMT3 (ENSPSNG00000004894) #31	TRPT1 (ENSPSNG00000004967) #32	NUDT22 (ENSPSNG00000004999) #33	DNAJC4 (ENSPSNG00000005027) #34	VEGFB (ENSPSNG00000005057) #35	FKBP2 (ENSPSNG00000005083) #36	PPP1R14B (ENSPSNG00000005105) #37	PLCB3 (ENSPSNG00000005194)
Dolphin	MODERN SPECIES	1712																MARK2 (ENSTTRG00000010189) #22	RCOR2 (ENSTTRG00000010202) #23	NAA40 (ENSTTRG00000010210) #24	COX8A (ENSTTRG00000010218) #25	OTUB1 (ENSTTRG00000010222) #26	MACROD1 (ENSTTRG00000010228) #27	STIP1 (ENSTTRG00000010235) #30	FERMT3 (ENSTTRG00000010244) #31	TRPT1 (ENSTTRG00000010252) #32	NUDT22 (ENSTTRG00000010259) #33	DNAJC4 (ENSTTRG00000010263) #34	VEGFB (ENSTTRG00000010265) #35	FKBP2 (ENSTTRG00000010267) #36	PLCB3 (ENSTTRG00000010271)	BAD (ENSTTRG00000010283)	GPR137 (ENSTTRG00000010286)
Sperm whale	MODERN SPECIES	1228																MARK2 (ENSPCTG00005019225) #22
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.a.c.a.b.b.a #10	ENSGT00940000163667.a.c.b #10	ENSGT00940000161239.l #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Yarkand deer	MODERN SPECIES	11	ENSCHYG00000020101 #10	ENSCHYG00000020357 #10	ENSCHYG00000000030 #10	ENSCHYG00000000040 #10	ENSCHYG00000000059	ENSCHYG00000000068 #11	ENSCHYG00000000102 #11	ENSCHYG00000000122 #11	ENSCHYG00000000141 #12	LGALS12 (ENSCHYG00000000154) #13	PLAAT3 (ENSCHYG00000000190) #16	ATL3 (ENSCHYG00000000208) #17	RTN3 (ENSCHYG00000000247) #19	ZFTA (ENSCHYG00000000304) #20	SPINDOC (ENSCHYG00000000325) #21	MARK2 (ENSCHYG00000000367) #22	RCOR2 (ENSCHYG00000000454) #23	NAA40 (ENSCHYG00000000489) #24	COX8A (ENSCHYG00000000507) #25	ENSCHYG00000000553 #26	MACROD1 (ENSCHYG00000000703) #27	FLRT1 (ENSCHYG00000000802) #28	ENSCHYG00000000829 #30	FERMT3 (ENSCHYG00000000897) #31	TRPT1 (ENSCHYG00000000921) #32	NUDT22 (ENSCHYG00000000944) #33	DNAJC4 (ENSCHYG00000000978) #34	PLCB3 (ENSCHYG00000001034)	BAD (ENSCHYG00000001170)	GPR137 (ENSCHYG00000001230)	KCNK4 (ENSCHYG00000001292)
Percora_a	ANCESTRAL SPECIES	16	ENSGT00940000157004.a.b.a	ENSGT00940000157004.a.b.b	ENSGT00940000154901.C.b.e	ENSGT00940000163667.a.c.a.b.a #10	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Siberian musk deer	MODERN SPECIES	1224	ENSMMSG00000011879 #10	ENSMMSG00000011868 #10	ENSMMSG00000011784 #10	ENSMMSG00000011721 #10	ENSMMSG00000011665 #11	ENSMMSG00000009715 #11	ENSMMSG00000009592 #11	PLAAT5 (ENSMMSG00000009542) #12	LGALS12 (ENSMMSG00000009042) #13	PLAAT3 (ENSMMSG00000008953) #16	ATL3 (ENSMMSG00000008889) #17	RTN3 (ENSMMSG00000008565) #19	ZFTA (ENSMMSG00000008490) #20	ENSMMSG00000008470	SPINDOC (ENSMMSG00000008448) #21	MARK2 (ENSMMSG00000008147) #22	RCOR2 (ENSMMSG00000008061) #23	ENSMMSG00000007918 #24	COX8A (ENSMMSG00000007882) #25	OTUB1 (ENSMMSG00000007821) #26	FLRT1 (ENSMMSG00000007806) #28	MACROD1 (ENSMMSG00000007762) #27	STIP1 (ENSMMSG00000007710) #30	FERMT3 (ENSMMSG00000007663) #31	NUDT22 (ENSMMSG00000022959) #33	TRPT1 (ENSMMSG00000022942) #32	DNAJC4 (ENSMMSG00000022933) #34	VEGFB (ENSMMSG00000022926) #35	FKBP2 (ENSMMSG00000022911) #36	ENSMMSG00000022898 #37	PLCB3 (ENSMMSG00000022830)
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000163667.a.c.a.b.b.b #10	ENSGT00940000163667.a.c.b #10	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.b.a.b #16	ENSGT00940000154853.d.a.b.b #16	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Caprinae	ANCESTRAL SPECIES	20	ENSGT00940000161239.l #11	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000161239.k.a.a #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.b.a.a #16	ENSGT00940000154853.d.a.b.a.b #16	ENSGT00940000154853.d.a.b.b #16	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020022311 #10	ENSOARG00020022359 #10	ENSOARG00020022414 #10	ENSOARG00020022510 #10	ENSOARG00020022539 #11	ENSOARG00020022570 #11	ENSOARG00020022597 #11	PLAAT5 (ENSOARG00020022652) #12	LGALS12 (ENSOARG00020022698) #13	ENSOARG00020022856 #16	ENSOARG00020022912 #16	ATL3 (ENSOARG00020022978) #17	RTN3 (ENSOARG00020023116) #19	ZFTA (ENSOARG00020023427) #20	SPINDOC (ENSOARG00020023441) #21	MARK2 (ENSOARG00020023514) #22	RCOR2 (ENSOARG00020024538) #23	NAA40 (ENSOARG00020024575) #24	COX8A (ENSOARG00020024622) #25	OTUB1 (ENSOARG00020024649) #26	MACROD1 (ENSOARG00020024720) #27	FLRT1 (ENSOARG00020024735) #28	ENSOARG00020024740	ENSOARG00020006353 #30	FERMT3 (ENSOARG00020006403) #31	TRPT1 (ENSOARG00020006462) #32	NUDT22 (ENSOARG00020006645) #33	DNAJC4 (ENSOARG00020006773) #34	VEGFB (ENSOARG00020006859) #35	ENSOARG00020006995 #36	PPP1R14B (ENSOARG00020007097) #37
Goat	MODERN SPECIES	21	ENSCHIG00000012746 #10	ENSCHIG00000025065 #10	ENSCHIG00000004328 #11	SLC22A9 (ENSCHIG00000000518) #11	PLAAT5 (ENSCHIG00000005227) #12	ENSCHIG00000020309 #13	ENSCHIG00000011083 #16	ENSCHIG00000003540 #13	ENSCHIG00000016166 #16	ENSCHIG00000014874 #16	ENSCHIG00000024459 #16	ATL3 (ENSCHIG00000022420) #17	ENSCHIG00000014185 #19	ZFTA (ENSCHIG00000022847) #20	SPINDOC (ENSCHIG00000009623) #21	MARK2 (ENSCHIG00000019875) #22	RCOR2 (ENSCHIG00000015292) #23	NAA40 (ENSCHIG00000010908) #24	COX8A (ENSCHIG00000024147) #25	ENSCHIG00000014256 #26	MACROD1 (ENSCHIG00000019953) #27	CORO1B (ENSCHIG00000017528)	RPS6KB2 (ENSCHIG00000009327)	PTPRCAP (ENSCHIG00000009500)	ENSCHIG00000024098	FLRT1 (ENSCHIG00000004163) #28	ENSCHIG00000010802 #30	FERMT3 (ENSCHIG00000024155) #31	TRPT1 (ENSCHIG00000021308) #32	NUDT22 (ENSCHIG00000016120) #33	DNAJC4 (ENSCHIG00000023580) #34
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000163667.a.c.a.b.b.a #10	ENSGT00940000163667.a.c.a.b.b.b #10	ENSGT00940000163667.a.c.b #10	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.b.a.b #16	ENSGT00940000154853.d.a.b.b #16	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911.k.b #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074.jb #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Bos	ANCESTRAL SPECIES	11	ENSGT00940000154901.C.b.e	ENSGT00940000163667.a.c.a.b.b.a #10	ENSGT00940000163667.a.c.a.b.b.b #10	ENSGT00940000163667.a.c.b #10	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.b.b #16	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911.k.b #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074.jb #36	ENSGT00960000191711	ENSGT00940000157074.ib.a #36
Bos_a	ANCESTRAL SPECIES	51									ENSGT00940000154853.d.b #16	ENSGT00940000162660.b.e.b.e.b.b	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911.k.b #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074.jb #36	ENSGT00960000191711	ENSGT01050000248447
Wild yak	MODERN SPECIES	626										ENSBMUG00000015842	ENSBMUG00000015825 #16	ATL3 (ENSBMUG00000015801) #17	RTN3 (ENSBMUG00000015756) #19	ZFTA (ENSBMUG00000015627) #20	SPINDOC (ENSBMUG00000015605) #21	MARK2 (ENSBMUG00000015395) #22	RCOR2 (ENSBMUG00000015113) #23	NAA40 (ENSBMUG00000015090) #24	COX8A (ENSBMUG00000015074) #25	OTUB1 (ENSBMUG00000015062) #26	FLRT1 (ENSBMUG00000015023) #28	MACROD1 (ENSBMUG00000015005) #27	ENSBMUG00000014985 #30	FERMT3 (ENSBMUG00000014929) #31	NUDT22 (ENSBMUG00000014863) #33	TRPT1 (ENSBMUG00000014838) #32	DNAJC4 (ENSBMUG00000014792) #34	VEGFB (ENSBMUG00000014729) #35	ENSBMUG00000014719 #36	ENSBMUG00000014636 #37	PLCB3 (ENSBMUG00000014600)
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000154901.C.b.e	ENSGT00940000163667.a.c.a.b.b.a #10	ENSGT00940000163667.a.c.a.a #10	ENSGT00940000163667.a.c.b #10	ENSGT00940000163667.b #10	ENSGT00940000161239.k.b #11	ENSGT00940000161239.k.a.b #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d.a.b.b #16	ENSGT00940000154853.d.a.a #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b.f #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT01100000263480.a.a.b.b.a.b	ENSGT00940000154911.k.b #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074.jb #36	ENSGT00950000182985.b.b #37
Hybrid Bos Indicus	MODERN SPECIES	21	SLC22A8 (ENSBIXG00005000435)	ENSBIXG00005011899	ENSBIXG00005011910 #10	ENSBIXG00005011974 #10	ENSBIXG00005011983	ENSBIXG00005006329 #10	ENSBIXG00005012170 #11	PLAAT5 (ENSBIXG00005012206) #12	LGALS12 (ENSBIXG00005012274) #13	ENSBIXG00005012288 #16	ENSBIXG00005001297 #16	ATL3 (ENSBIXG00005012347) #17	ZFTA (ENSBIXG00005012369) #20	RTN3 (ENSBIXG00005012431) #19	SPINDOC (ENSBIXG00005012481) #21	MARK2 (ENSBIXG00005012594) #22	RCOR2 (ENSBIXG00005000306) #23	NAA40 (ENSBIXG00005012709) #24	ENSBIXG00005012717	ENSBIXG00005012737 #25	OTUB1 (ENSBIXG00005001411) #26	FLRT1 (ENSBIXG00005012789) #28	MACROD1 (ENSBIXG00005012832) #27	ENSBIXG00005012852	ENSBIXG00005012901 #30	FERMT3 (ENSBIXG00005012931) #31	TRPT1 (ENSBIXG00005012973) #32	NUDT22 (ENSBIXG00005001478) #33	ENSBIXG00005013006 #34	ENSBIXG00005013057 #35	FKBP2 (ENSBIXG00005001501) #36
Cow	MODERN SPECIES	21	ENSBTAG00000054320	ENSBTAG00000000518 #10	SLC22A9 (ENSBTAG00000039463) #11	ENSBTAG00000003236 #11	PLAAT5 (ENSBTAG00000032730) #12	LGALS12 (ENSBTAG00000007108) #13	ENSBTAG00000037645	ENSBTAG00000011019 #16	ENSBTAG00000054910	ENSBTAG00000052238	PLA2G16 (ENSBTAG00000015248) #16	ATL3 (ENSBTAG00000003330) #17	RTN3 (ENSBTAG00000019204) #19	ZFTA (ENSBTAG00000019208) #20	SPINDOC (ENSBTAG00000018022) #21	MARK2 (ENSBTAG00000007825) #22	RCOR2 (ENSBTAG00000007827) #23	NAA40 (ENSBTAG00000003073) #24	ENSBTAG00000055013	COX8A (ENSBTAG00000052272) #25	OTUB1 (ENSBTAG00000003967) #26	MACROD1 (ENSBTAG00000017181) #27	FLRT1 (ENSBTAG00000048264) #28	ENSBTAG00000053576	STIP1 (ENSBTAG00000015663) #30	FERMT3 (ENSBTAG00000045862) #31	TRPT1 (ENSBTAG00000016555) #32	NUDT22 (ENSBTAG00000016559) #33	DNAJC4 (ENSBTAG00000016560) #34	VEGFB (ENSBTAG00000047567) #35	FKBP2 (ENSBTAG00000013606) #36
American bison	MODERN SPECIES	3018										ENSBBBG00000021642	ENSBBBG00000021627 #16	ATL3 (ENSBBBG00000021605) #17	RTN3 (ENSBBBG00000021572) #19	ZFTA (ENSBBBG00000007521) #20	SPINDOC (ENSBBBG00000005714) #21	MARK2 (ENSBBBG00000021376) #22	RCOR2 (ENSBBBG00000020733) #23	NAA40 (ENSBBBG00000020723) #24	COX8A (ENSBBBG00000020712) #25	OTUB1 (ENSBBBG00000020705) #26	MACROD1 (ENSBBBG00000020665) #27	FLRT1 (ENSBBBG00000020605) #28	ENSBBBG00000005558 #30	FERMT3 (ENSBBBG00000020566) #31	TRPT1 (ENSBBBG00000007238) #32	NUDT22 (ENSBBBG00000020494) #33	DNAJC4 (ENSBBBG00000020465) #34	VEGFB (ENSBBBG00000020455) #35	ENSBBBG00000020447 #36	ENSBBBG00000020436 #37	PLCB3 (ENSBBBG00000000517)
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000162878 #14	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Xenarthra	ANCESTRAL SPECIES	1084													ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23
Sloth	MODERN SPECIES	6451																ENSCHOG00000012884 #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	3702													ENSDNOG00000046371 #19	ZFTA (ENSDNOG00000039852) #20	SPINDOC (ENSDNOG00000048767) #21	ENSDNOG00000034761 #22	RCOR2 (ENSDNOG00000002038) #23
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	4368															ENSDNOG00000043760	ENSDNOG00000035568 #22	ENSDNOG00000033995	ENSDNOG00000025681	ENSDNOG00000046280
Armadillo	MODERN SPECIES	2928															ENSDNOG00000038195	ENSDNOG00000035359 #22	ENSDNOG00000033678
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1179																ENSDNOG00000038643 #22
Armadillo	MODERN SPECIES	4382																ENSDNOG00000038819 #22
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	4032																ENSDNOG00000040075 #22
Armadillo	MODERN SPECIES	1489																ENSDNOG00000036650 #22
Armadillo	MODERN SPECIES	2998												ESD (ENSDNOG00000043846)	HTR2A (ENSDNOG00000008954)	ENSDNOG00000037163	SUCLA2 (ENSDNOG00000016140)	ENSDNOG00000037553 #22	NUDT15 (ENSDNOG00000023617)	ENSDNOG00000018064	ENSDNOG00000032956	ITM2B (ENSDNOG00000039110)	LPAR6 (ENSDNOG00000013367)	RB1 (ENSDNOG00000013345)	RCBTB2 (ENSDNOG00000037693)	ENSDNOG00000001513	IFI44 (ENSDNOG00000007317)	IFI44L (ENSDNOG00000033462)	PTGFR (ENSDNOG00000031456)	GIPC2 (ENSDNOG00000010996)	DNAJB4 (ENSDNOG00000040813)	ENSDNOG00000013200	NEXN (ENSDNOG00000013409)
Armadillo	MODERN SPECIES	1667																ENSDNOG00000042612 #22	RGCC (ENSDNOG00000032695)
Armadillo	MODERN SPECIES	3468								RAB7A (ENSDNOG00000007003)	H1-10 (ENSDNOG00000048886)	HMCES (ENSDNOG00000041236)	COPG1 (ENSDNOG00000008993)	CNBP (ENSDNOG00000032573)	ISY1 (ENSDNOG00000002763)	RAB43 (ENSDNOG00000025799)	GP9 (ENSDNOG00000023911)	ENSDNOG00000048432 #22	ENSDNOG00000032320	WASF1 (ENSDNOG00000003928)	CDC40 (ENSDNOG00000017344)	METTL24 (ENSDNOG00000040180)	DDO (ENSDNOG00000035531)
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00390000012589.h	ENSGT00390000007539.i.a	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Tenrec	MODERN SPECIES	2916													RTN3 (ENSETEG00000002692) #19	ENSETEG00000002699 #20	SPINDOC (ENSETEG00000002702) #21	MARK2 (ENSETEG00000002709) #22
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00390000012589.h	ENSGT00390000007539.i.a	ENSGT01000000214440.C	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000161239 #11	ENSGT00940000162436 #12	ENSGT00940000161499 #13	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482.d #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539
Hyrax	MODERN SPECIES	6097																MARK2 (ENSPCAG00000002721) #22	RCOR2 (ENSPCAG00000002781) #23	NAA40 (ENSPCAG00000002859) #24
Elephant	DUPLICATION
Elephant	MODERN SPECIES	532	EML3 (ENSLAFG00000009937)	WDR74 (ENSLAFG00000006790)	SLC3A2 (ENSLAFG00000018263)	SLC22A6 (ENSLAFG00000009174)	SLC22A8 (ENSLAFG00000004863)	SLC22A9 (ENSLAFG00000012501) #11	PLAAT5 (ENSLAFG00000021958) #12	LGALS12 (ENSLAFG00000002946) #13	ENSLAFG00000011733 #15	ENSLAFG00000008426 #15	PLAAT3 (ENSLAFG00000023290) #16	ATL3 (ENSLAFG00000018322) #17	RTN3 (ENSLAFG00000018325) #19	ZFTA (ENSLAFG00000020497) #20	SPINDOC (ENSLAFG00000030919) #21	MARK2 (ENSLAFG00000006072) #22	RCOR2 (ENSLAFG00000006094) #23	NAA40 (ENSLAFG00000022166) #24	COX8A (ENSLAFG00000011304) #25	OTUB1 (ENSLAFG00000021422) #26	FLRT1 (ENSLAFG00000014677) #28	ENSLAFG00000014681 #27	STIP1 (ENSLAFG00000014685) #30	FERMT3 (ENSLAFG00000009071) #31	TRPT1 (ENSLAFG00000009075) #32	NUDT22 (ENSLAFG00000009080) #33	DNAJC4 (ENSLAFG00000009083) #34	VEGFB (ENSLAFG00000025678) #35	FKBP2 (ENSLAFG00000009087) #36	PPP1R14B (ENSLAFG00000021755) #37	PLCB3 (ENSLAFG00000009090)
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	MODERN SPECIES	238											ENSLAFG00000028614	ENSLAFG00000030901	ENSLAFG00000026207	ENSLAFG00000026785	ENSLAFG00000027409 #22	ENSLAFG00000029802 #22
Elephant	MODERN SPECIES	448																ENSLAFG00000027478 #22
Elephant	DUPLICATION
Elephant	MODERN SPECIES	295															ENSLAFG00000030576	ENSLAFG00000027106 #22
Elephant	MODERN SPECIES	238												ENSLAFG00000028614	ENSLAFG00000030901	ENSLAFG00000026207	ENSLAFG00000026785	ENSLAFG00000027409 #22	ENSLAFG00000029802 #22
Elephant	DUPLICATION
Elephant	MODERN SPECIES	522																ENSLAFG00000027400 #22
Elephant	MODERN SPECIES	433																ENSLAFG00000025664 #22
Elephant	MODERN SPECIES	313																ENSLAFG00000027261 #22	ENSLAFG00000032087	ENSLAFG00000027955
Elephant	MODERN SPECIES	37																ENSLAFG00000028595 #22	OR2Z1 (ENSLAFG00000004122)	ADAMTS10 (ENSLAFG00000011470)	MYO1F (ENSLAFG00000011461)	ZNF414 (ENSLAFG00000021907)	PRAM1 (ENSLAFG00000025890)	HNRNPM (ENSLAFG00000013603)	MARCHF2 (ENSLAFG00000013602)	RAB11B (ENSLAFG00000013598)	ANGPTL4 (ENSLAFG00000005770)	ENSLAFG00000014137	RPS28 (ENSLAFG00000029923)	NDUFA7 (ENSLAFG00000018390)	ENSLAFG00000014131	CERS4 (ENSLAFG00000012414)	FBN3 (ENSLAFG00000029310)
Elephant	MODERN SPECIES	524																ENSLAFG00000030033 #22	ENSLAFG00000028509 #22
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	DUPLICATION
Elephant	MODERN SPECIES	66																ENSLAFG00000028615 #22
Elephant	MODERN SPECIES	299															ENSLAFG00000021389	ENSLAFG00000026640 #22
Elephant	MODERN SPECIES	271																ENSLAFG00000026517 #22	ENSLAFG00000032622	ENSLAFG00000026044
Elephant	MODERN SPECIES	524																ENSLAFG00000028509 #22	ENSLAFG00000030033 #22
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00970000198388	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000157004.a.a.e.b	ENSGT00940000161499 #13	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00940000168159	ENSGT00390000006255.b.b #25	ENSGT00940000156048.a.a	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36
Opossum	MODERN SPECIES	4	TMEM223 (ENSMODG00000008008)	ENSMODG00000008085	WDR74 (ENSMODG00000008120)	SLC3A2 (ENSMODG00000008156)	CHRM1 (ENSMODG00000008164)	ENSMODG00000049907	SLC22A8 (ENSMODG00000036916)	SLC22A6 (ENSMODG00000008309)	ENSMODG00000038980	ENSMODG00000008374	ENSMODG00000028381 #13	ENSMODG00000037909	ENSMODG00000008485 #17	ENSMODG00000008519 #19	SPINDOC (ENSMODG00000025552) #21	MARK2 (ENSMODG00000008796) #22	ENSMODG00000008821 #24	ENSMODG00000008826	ENSMODG00000041851	ENSMODG00000043944 #25	ENSMODG00000029435	NAP1L4 (ENSMODG00000007012)	CARS1 (ENSMODG00000007058)	ENSMODG00000007115	OSBPL5 (ENSMODG00000007169)	MRGPRE (ENSMODG00000007185)	ENSMODG00000024127	ENSMODG00000024125	ENSMODG00000036774	ENSMODG00000047236	ENSMODG00000007244
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00970000198388	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000157004.a.a.e.b	ENSGT00940000161499 #13	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00940000168159	ENSGT00390000006255.b.b #25	ENSGT00940000156048.a.a	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36
Diprotodontia	ANCESTRAL SPECIES	26	ENSGT00390000015119	ENSGT00940000156646	ENSGT00940000162301	ENSGT00970000198388	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000157004.a.a.e.b	ENSGT00940000161499 #13	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00940000156048.a.a	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00940000156646	ENSGT00940000162301	ENSGT00970000198388	ENSGT00940000154901.C.b.f.b.a.b	ENSGT00940000157004.a.b	ENSGT00940000154901.C.b.e	ENSGT00940000157004.a.a.e.b	ENSGT00940000161499 #13	ENSGT00940000162660.b.e.a	ENSGT00940000162660.b.e.b.g.a	ENSGT00940000154853.d #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00410000025985 #21	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00940000156048.a.a	ENSGT00390000006255.b.b #25	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911.a #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000161844 #35	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37
koala	MODERN SPECIES	179	SLC3A2 (ENSPCIG00000018245)	CHRM1 (ENSPCIG00000017643)	ENSPCIG00000017645	ENSPCIG00000017646	SLC22A6 (ENSPCIG00000015223)	SLC22A8 (ENSPCIG00000015222)	ENSPCIG00000015537	LGALS12 (ENSPCIG00000015539) #13	ENSPCIG00000015542	ENSPCIG00000015546	PLAAT3 (ENSPCIG00000031587) #16	ATL3 (ENSPCIG00000015551) #17	ENSPCIG00000015561 #19	ZFTA (ENSPCIG00000015569) #20	SPINDOC (ENSPCIG00000015574) #21	MARK2 (ENSPCIG00000015578) #22	RCOR2 (ENSPCIG00000015584) #23	NAA40 (ENSPCIG00000035706) #24	ENSPCIG00000030061	ENSPCIG00000016936 #25	ENSPCIG00000016937 #26	MACROD1 (ENSPCIG00000016939) #27	FLRT1 (ENSPCIG00000008072) #28	ENSPCIG00000008070 #30	FERMT3 (ENSPCIG00000008068) #31	TRPT1 (ENSPCIG00000008060) #32	NUDT22 (ENSPCIG00000008057) #33	ENSPCIG00000008056 #34	ENSPCIG00000008055 #35	FKBP2 (ENSPCIG00000008054) #36	PPP1R14B (ENSPCIG00000008053) #37
Common wonbat	MODERN SPECIES	714				ENSVURG00010006290	ENSVURG00010006274	ENSVURG00010006240	LGALS12 (ENSVURG00010006192) #13	ENSVURG00010006179	ENSVURG00010006170	ENSVURG00010006160	ENSVURG00010006147	ATL3 (ENSVURG00010006118) #17	ENSVURG00010006110 #19	ENSVURG00010006102 #20	SPINDOC (ENSVURG00010006079) #21	MARK2 (ENSVURG00010005881) #22	RCOR2 (ENSVURG00010005740) #23	NAA40 (ENSVURG00010005714) #24	ENSVURG00010005435	OTUB1 (ENSVURG00010005409) #26	FLRT1 (ENSVURG00010005399) #28	MACROD1 (ENSVURG00010005097) #27	STIP1 (ENSVURG00010005045) #30	FERMT3 (ENSVURG00010005016) #31	TRPT1 (ENSVURG00010004995) #32	NUDT22 (ENSVURG00010004987) #33	DNAJC4 (ENSVURG00010004977) #34	ENSVURG00010004968 #35	FKBP2 (ENSVURG00010004944) #36	ENSVURG00010004927 #37	PLCB3 (ENSVURG00010004855)
Wallaby	MODERN SPECIES	8635																MARK2 (ENSMEUG00000012802) #22	RCOR2 (ENSMEUG00000012836) #23	NAA40 (ENSMEUG00000012858) #24
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000022006	CHRM1 (ENSSHAG00000021922)	ENSSHAG00000022689	SLC22A6 (ENSSHAG00000007804)	SLC22A8 (ENSSHAG00000006603)	ENSSHAG00000032003	ENSSHAG00000005173	LGALS12 (ENSSHAG00000004703) #13	ENSSHAG00000022686	ENSSHAG00000020987 #16	ATL3 (ENSSHAG00000002162) #17	ENSSHAG00000021781 #19	ZFTA (ENSSHAG00000022871) #20	SPINDOC (ENSSHAG00000006662) #21	RCOR2 (ENSSHAG00000020586) #23	MARK2 (ENSSHAG00000005716) #22	ENSSHAG00000004812	NAA40 (ENSSHAG00000005153) #24	OTUB1 (ENSSHAG00000031213) #26	FLRT1 (ENSSHAG00000023343) #28	MACROD1 (ENSSHAG00000021929) #27	STIP1 (ENSSHAG00000003377) #30	FERMT3 (ENSSHAG00000020504) #31	ENSSHAG00000021407 #32	ENSSHAG00000026465 #34	NUDT22 (ENSSHAG00000003988) #33	ENSSHAG00000022825 #35	FKBP2 (ENSSHAG00000022630) #36	PPP1R14B (ENSSHAG00000031614) #37	PLCB3 (ENSSHAG00000004792)	ENSSHAG00000021358
Platypus	MODERN SPECIES	14	TMEM223 (ENSOANG00000043257)	ENSOANG00000040729	STX5 (ENSOANG00000039351)	WDR74 (ENSOANG00000037883)	SLC3A2 (ENSOANG00000010311)	ENSOANG00000031587	SLC22A6 (ENSOANG00000008288)	LGALS12 (ENSOANG00000004064) #13	ENSOANG00000040471	ENSOANG00000042590	ATL3 (ENSOANG00000037533) #17	ENSOANG00000050498 #19	ZFTA (ENSOANG00000002940) #20	ENSOANG00000051102 #21	ENSOANG00000014021	MARK2 (ENSOANG00000036135) #22	NAA40 (ENSOANG00000012758) #24	ENSOANG00000002564	OTUB1 (ENSOANG00000013465) #26	ENSOANG00000046888 #27	RCOR2 (ENSOANG00000040560) #23	FLRT1 (ENSOANG00000037641) #28	ENSOANG00000045018 #27	STIP1 (ENSOANG00000014523) #30	FERMT3 (ENSOANG00000038362) #31	TRPT1 (ENSOANG00000010375) #32	NUDT22 (ENSOANG00000046444) #33	DNAJC4 (ENSOANG00000045664) #34	ENSOANG00000021480 #35	FKBP2 (ENSOANG00000039747) #36	ENSOANG00000044461
Sauria	ANCESTRAL SPECIES	51						ENSGT00940000161499 #13	ENSGT00940000162660.b.f	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
Lepidosauria	ANCESTRAL SPECIES	47	ENSGT00940000160444	ENSGT00940000169892	ENSGT01100000263515.a.b.a.b.b.h.e.b.b	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000158895.c.a	ENSGT00940000158895.c.b	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
tuatara	MODERN SPECIES	782	DUSP23 (ENSSPUG00000008113)	ENSSPUG00000008124	ENSSPUG00000008132	ACKR1 (ENSSPUG00000008136)	CADM3 (ENSSPUG00000008141)	ENSSPUG00000008146	ENSSPUG00000008149	OR6N2 (ENSSPUG00000008153)	OR6N1 (ENSSPUG00000008159)	ENSSPUG00000008164	ENSSPUG00000008177 #16	ATL3 (ENSSPUG00000008184) #17	ENSSPUG00000008191 #19	ZFTA (ENSSPUG00000008202) #20	ENSSPUG00000008216	MARK2 (ENSSPUG00000008222) #22	RCOR2 (ENSSPUG00000008241) #23	NAA40 (ENSSPUG00000008279) #24	OTUB1 (ENSSPUG00000008312) #26
Episquamata	ANCESTRAL SPECIES	19	ENSGT00940000160444	ENSGT00940000169892	ENSGT01100000263515.a.b.a.b.b.h.e.b.b	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000158895.c.a	ENSGT00940000158895.c.b	ENSGT00940000162660.b.e.b.a.b	ENSGT00940000162660.b.e.a	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000161450 #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
Laterata	ANCESTRAL SPECIES	25	ENSGT01100000263515.a.b.a.b.b.h.f	ENSGT01100000263515.a.b.a.b.b.g.b.a.a	ENSGT01100000263515.a.b.a.b.b.g.b.a.b	ENSGT01100000263515.a.b.a.b.b.h.e.b.b	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000158895.c.a	ENSGT00940000158895.c.b	ENSGT00940000162660.b.e.b.a.b	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074.j #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916.a
Argentine black and white tegu	MODERN SPECIES	78	LYSMD1 (ENSSMRG00000010106)	TNFAIP8L2 (ENSSMRG00000010107)	ENSSMRG00000010108	ENSSMRG00000010109	ENSSMRG00000010110	CADM3 (ENSSMRG00000010111)	OR6N2 (ENSSMRG00000010112)	ENSSMRG00000010113	ENSSMRG00000010115	ENSSMRG00000010117 #16	ATL3 (ENSSMRG00000010118) #17	ENSSMRG00000010119 #19	ZFTA (ENSSMRG00000010120) #20	ENSSMRG00000010121	ENSSMRG00000010122	MARK2 (ENSSMRG00000010124) #22	RCOR2 (ENSSMRG00000010132) #23	NAA40 (ENSSMRG00000010214) #24	ENSSMRG00000010215	OTUB1 (ENSSMRG00000010218) #26	MACROD1 (ENSSMRG00000010221) #27	FLRT1 (ENSSMRG00000010226) #28	STIP1 (ENSSMRG00000010227) #30	FERMT3 (ENSSMRG00000010316) #31	TRPT1 (ENSSMRG00000010318) #32	NUDT22 (ENSSMRG00000010320) #33	DNAJC4 (ENSSMRG00000010321) #34	ENSSMRG00000010323	FKBP2 (ENSSMRG00000010325) #36	PPP1R14B (ENSSMRG00000010326) #37	PLCB3 (ENSSMRG00000010327)
Common wall lizard	MODERN SPECIES	7	ENSPMRG00000018379	ENSPMRG00000018374	ENSPMRG00000018370	ENSPMRG00000018368	ACKR1 (ENSPMRG00000018360)	CADM3 (ENSPMRG00000018343)	OR6N2 (ENSPMRG00000018328)	OR6N1 (ENSPMRG00000018321)	ENSPMRG00000018306	ENSPMRG00000018293 #16	ATL3 (ENSPMRG00000018282) #17	ENSPMRG00000018274 #19	ZFTA (ENSPMRG00000018267) #20	ENSPMRG00000018261	ENSPMRG00000018257	MARK2 (ENSPMRG00000018128) #22	RCOR2 (ENSPMRG00000018078) #23	NAA40 (ENSPMRG00000018070) #24	ENSPMRG00000018064	ENSPMRG00000018047	MACROD1 (ENSPMRG00000018025) #27	OTUB1 (ENSPMRG00000018013) #26	FLRT1 (ENSPMRG00000018006) #28	STIP1 (ENSPMRG00000017998) #30	FERMT3 (ENSPMRG00000017988) #31	TRPT1 (ENSPMRG00000017972) #32	LRRC71 (ENSPMRG00000017960)	NUDT22 (ENSPMRG00000017952) #33	DNAJC4 (ENSPMRG00000017947) #34	ENSPMRG00000017942	ENSPMRG00000017937 #36
Toxicofera	ANCESTRAL SPECIES	28	ENSGT01100000263515.a.b.a.b.b.h.f	ENSGT01100000263515.a.b.a.b.b.g.b.a.a	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000162973	ENSGT00940000158895.c.a	ENSGT00940000162660.b.e.b.a.a	ENSGT00940000162660.b.e.b.a.b	ENSGT00940000162660.b.e.a	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000161450.b #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37
Lizard	MODERN SPECIES	1304															ENSACAG00000012158	MARK2 (ENSACAG00000012178) #22	RCOR2 (ENSACAG00000012368) #23	NAA40 (ENSACAG00000012434) #24	ENSACAG00000012464
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	27	ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b	ENSGT01100000263515.a.b.a.b.b.g.a	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000162973	ENSGT00940000158895.c.a	ENSGT00940000162660.b.e.b.a.a	ENSGT00940000162660.b.e.b.a.b	ENSGT00940000154853 #16	ENSGT00940000162660.b.e.b.b	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031.m #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000161450.b #27	ENSGT00940000161450.a #27	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37
Elapidae_a	ANCESTRAL SPECIES	43	ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a	ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b	ENSGT01100000263515.a.b.a.b.b.g.a	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000162973	ENSGT00940000158895.c.a	ENSGT00940000162660.b.e.b.a.a	ENSGT00940000162660.b.e.b.a.b	ENSGT00940000154853 #16	ENSGT00940000158566.m.b #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031.m #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b.d #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916	ENSGT00940000165892	ENSGT00990000210308	ENSGT00940000153986.b.b
Acanthophiinae	ANCESTRAL SPECIES	47	ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.a	ENSGT01100000263515.a.b.a.b.b.g.b.a.a.d.b	ENSGT01100000263515.a.b.a.b.b.g.a	ENSGT00390000006372	ENSGT00940000159779	ENSGT00940000162973	ENSGT00940000158895.c.a	ENSGT00940000162660.b.e.b.a.a	ENSGT00940000162660.b.e.b.a.b	ENSGT00940000154853 #16	ENSGT00940000158566.m.b #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031.m #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b.d #31	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916	ENSGT00940000165892	ENSGT00940000153986.b.b	ENSGT00940000160310	ENSGT00940000166208	ENSGT00940000153433.B.b	ENSGT00940000164608
Eastern brown snake	MODERN SPECIES	85	ENSPTXG00000010089	ENSPTXG00000010088	ENSPTXG00000010087	ENSPTXG00000010086	ENSPTXG00000010085	CADM3 (ENSPTXG00000010083)	OR6K3 (ENSPTXG00000010082)	ENSPTXG00000010080	ENSPTXG00000010079	ENSPTXG00000010078 #16	ENSPTXG00000009909 #17	ENSPTXG00000009908 #19	ZFTA (ENSPTXG00000009907) #20	ENSPTXG00000009906	ENSPTXG00000009905	MARK2 (ENSPTXG00000009903) #22	RCOR2 (ENSPTXG00000009902) #23	NAA40 (ENSPTXG00000009899) #24	STIP1 (ENSPTXG00000009898) #30	FERMT3 (ENSPTXG00000009894) #31	PLCB3 (ENSPTXG00000009887)	ENSPTXG00000009469	ENSPTXG00000009467	ENSPTXG00000009466	ENSPTXG00000009465	TRMT112 (ENSPTXG00000009463)	ENSPTXG00000009461	RPS6KA4 (ENSPTXG00000009460)	ENSPTXG00000009456	SLC3A2 (ENSPTXG00000009455)	TMEM223 (ENSPTXG00000009454)
Mainland tiger snake	MODERN SPECIES	825																ENSNSUG00000005140 #22
Indian cobra	MODERN SPECIES	17	ENSNNAG00000007266	ENSNNAG00000007287	ENSNNAG00000007337	ENSNNAG00000007363	CADM3 (ENSNNAG00000007377)	OR6K2 (ENSNNAG00000007406)	ENSNNAG00000007424	ENSNNAG00000007458	ENSNNAG00000007486 #16	ENSNNAG00000007507	ATL3 (ENSNNAG00000007517) #17	ENSNNAG00000007579 #19	ZFTA (ENSNNAG00000007620) #20	ENSNNAG00000007705	ENSNNAG00000007754	ENSNNAG00000007791 #22	RCOR2 (ENSNNAG00000007816) #23	NAA40 (ENSNNAG00000007914) #24	OTUB1 (ENSNNAG00000007945) #26	MACROD1 (ENSNNAG00000007981) #27	FLRT1 (ENSNNAG00000008085) #28	STIP1 (ENSNNAG00000008147) #30	FERMT3 (ENSNNAG00000008254) #31	TRPT1 (ENSNNAG00000008523) #32	NUDT22 (ENSNNAG00000008571) #33	DNAJC4 (ENSNNAG00000008639) #34	ENSNNAG00000008620	FKBP2 (ENSNNAG00000008656) #36	KCNK4 (ENSNNAG00000008694)	ENSNNAG00000008742	ENSNNAG00000008854
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000155031.n #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000155031.n #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000155031.n #22
Mainland tiger snake	MODERN SPECIES	2610																ENSNSUG00000003649 #22
Blue-lipped sea krait	MODERN SPECIES	2396																MARK2 (ENSLLTG00000002313) #22
Archelosauria	ANCESTRAL SPECIES	47							ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161499 #13	ENSGT00940000162660.b.f	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853 #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161499 #13	ENSGT00940000162660.b.f	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a.a	ENSGT00940000154853.b #16	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853.a #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT01020000231208	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137
Emydidae	ANCESTRAL SPECIES	13	ENSGT00940000154901.C.b.f.b.a.a.j	ENSGT00940000154901.C.b.f.b.a.a.i.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a.i.a	ENSGT00940000161499 #13	ENSGT00940000162660.b.f	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a.a	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853.a #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000166053	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT01020000231208	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137
Three-toed box turtle	MODERN SPECIES	33	ENSTMTG00000002391	ENSTMTG00000002322	ENSTMTG00000002299	ENSTMTG00000002287	LGALS12 (ENSTMTG00000002278) #13	ENSTMTG00000002262	ENSTMTG00000002253	ENSTMTG00000002243	ENSTMTG00000002196	ENSTMTG00000002174 #16	ATL3 (ENSTMTG00000002166) #17	ENSTMTG00000002155 #19	ZFTA (ENSTMTG00000002149) #20	ENSTMTG00000002140	ENSTMTG00000002131	MARK2 (ENSTMTG00000002082) #22	RCOR2 (ENSTMTG00000002058) #23	NAA40 (ENSTMTG00000002041) #24	ENSTMTG00000002032	OTUB1 (ENSTMTG00000002025) #26	FLRT1 (ENSTMTG00000002016) #28	MACROD1 (ENSTMTG00000002001) #27	STIP1 (ENSTMTG00000001988) #30	FERMT3 (ENSTMTG00000001979) #31	TRPT1 (ENSTMTG00000001971) #32	NUDT22 (ENSTMTG00000001965) #33	DNAJC4 (ENSTMTG00000001958) #34	ENSTMTG00000001943	FKBP2 (ENSTMTG00000001925) #36	PPP1R14B (ENSTMTG00000001916) #37	PLCB3 (ENSTMTG00000001890)
painted turtle	MODERN SPECIES	2386	ENSCPBG00000023560	ENSCPBG00000023557	ENSCPBG00000023553	ENSCPBG00000023549	LGALS12 (ENSCPBG00000023548) #13	ENSCPBG00000023542	ENSCPBG00000023537	ENSCPBG00000023535	ENSCPBG00000023534	ENSCPBG00000023531 #16	ATL3 (ENSCPBG00000023529) #17	ENSCPBG00000023525 #19	ZFTA (ENSCPBG00000023522) #20	ENSCPBG00000023519	ENSCPBG00000023518	MARK2 (ENSCPBG00000023513) #22	RCOR2 (ENSCPBG00000023509) #23	NAA40 (ENSCPBG00000023507) #24	ENSCPBG00000023503	OTUB1 (ENSCPBG00000023500) #26	FLRT1 (ENSCPBG00000023497) #28	MACROD1 (ENSCPBG00000023496) #27	STIP1 (ENSCPBG00000023493) #30	FERMT3 (ENSCPBG00000023490) #31	NUDT22 (ENSCPBG00000023489) #33	DNAJC4 (ENSCPBG00000023487) #34	ENSCPBG00000023482	FKBP2 (ENSCPBG00000023480) #36	PPP1R14B (ENSCPBG00000023479) #37	PLCB3 (ENSCPBG00000023470)	ENSCPBG00000023467
Testudinidae	ANCESTRAL SPECIES	5	ENSGT00940000154901.C.b.f.b.b.b	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00940000161499 #13	ENSGT00940000162660.b.f	ENSGT00940000162660.b.e.b.a	ENSGT00940000162660.b.e.a.a	ENSGT00940000154853.b #16	ENSGT00940000162660.b.e.a.b	ENSGT00940000154853.a #16	ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00950000185472	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT01020000231208	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00390000017869 #33	ENSGT00510000048574 #34	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137
Abingdon island giant tortoise	MODERN SPECIES	2278	ENSCABG00000001060	ENSCABG00000000934	ENSCABG00000000918	LGALS12 (ENSCABG00000000816) #13	ENSCABG00000000809	ENSCABG00000000756	ENSCABG00000000747	ENSCABG00000000745	ENSCABG00000000743	ENSCABG00000000740 #16	ATL3 (ENSCABG00000000739) #17	ENSCABG00000000737 #19	ZFTA (ENSCABG00000000736) #20	ENSCABG00000000734	ENSCABG00000000726	MARK2 (ENSCABG00000000715) #22	RCOR2 (ENSCABG00000000704) #23	NAA40 (ENSCABG00000000700) #24	ENSCABG00000000699	OTUB1 (ENSCABG00000000696) #26	FLRT1 (ENSCABG00000000693) #28	MACROD1 (ENSCABG00000000690) #27	STIP1 (ENSCABG00000000686) #30	FERMT3 (ENSCABG00000000681) #31	TRPT1 (ENSCABG00000000679) #32	NUDT22 (ENSCABG00000000676) #33	DNAJC4 (ENSCABG00000000671) #34	ENSCABG00000000662	FKBP2 (ENSCABG00000000657) #36	PPP1R14B (ENSCABG00000000655) #37	PLCB3 (ENSCABG00000000637)
Goode s thornscrub tortoise	MODERN SPECIES	21	ENSGEVG00005009473	ENSGEVG00005010042	ENSGEVG00005010707	LGALS12 (ENSGEVG00005011151) #13	ENSGEVG00005011225	ENSGEVG00005011291	ENSGEVG00005011390	ENSGEVG00005011491 #16	ENSGEVG00005011526 #16	ENSGEVG00005011654 #16	ATL3 (ENSGEVG00005011679) #17	ENSGEVG00005011707 #19	ZFTA (ENSGEVG00005011808) #20	ENSGEVG00005011885	ENSGEVG00005011921	MARK2 (ENSGEVG00005012049) #22	RCOR2 (ENSGEVG00005012299) #23	NAA40 (ENSGEVG00005012468) #24	OTUB1 (ENSGEVG00005012541) #26	MACROD1 (ENSGEVG00005012579) #27	FLRT1 (ENSGEVG00005012655) #28	STIP1 (ENSGEVG00005012709) #30	FERMT3 (ENSGEVG00005013302) #31	TRPT1 (ENSGEVG00005013344) #32	NUDT22 (ENSGEVG00005013375) #33	DNAJC4 (ENSGEVG00005013401) #34	ENSGEVG00005013455	FKBP2 (ENSGEVG00005013515) #36	PPP1R14B (ENSGEVG00005013544) #37	PLCB3 (ENSGEVG00005013603)	ENSGEVG00005013804
Chinese turtle	MODERN SPECIES	1208										ENSPSIG00000004304	ENSPSIG00000004306 #16	ATL3 (ENSPSIG00000004359) #17	RTN3 (ENSPSIG00000004974) #19	ZFTA (ENSPSIG00000005255) #20	ENSPSIG00000005267	MARK2 (ENSPSIG00000005315) #22	RCOR2 (ENSPSIG00000006704) #23	NAA40 (ENSPSIG00000007661) #24	OTUB1 (ENSPSIG00000008240) #26	ENSPSIG00000009225 #27	FLRT1 (ENSPSIG00000001844) #28
Archosauria	ANCESTRAL SPECIES	84														ENSGT00940000157482 #19	ENSGT00980000200147	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32
Aves	ANCESTRAL SPECIES	80														ENSGT00940000157482 #19	ENSGT00980000200147	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32
Neognathae	ANCESTRAL SPECIES	46	ENSGT00940000159147	ENSGT00390000016784	ENSGT00940000161776	ENSGT00940000155070	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00390000012424.a	ENSGT00940000159867	ENSGT00940000162343	ENSGT00940000163054.b	ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00980000200147	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00930000151054	ENSGT00530000063721.B
Neognathae_b	ANCESTRAL SPECIES	39	ENSGT00940000154524.a	ENSGT00940000159147	ENSGT00390000016784	ENSGT00940000161776	ENSGT00940000155070	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00390000012424.a	ENSGT00940000159867	ENSGT00940000163054.b	ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00980000200147	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000008374	ENSGT00390000008975	ENSGT00390000007552	ENSGT00940000154902	ENSGT00940000157679
Passeriformes	ANCESTRAL SPECIES	43	ENSGT00940000170110	ENSGT00940000157743	ENSGT00940000159147	ENSGT00390000016784	ENSGT00940000161776	ENSGT00940000155070	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00390000012424.a	ENSGT00940000159867	ENSGT00940000163054.b	ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000008374	ENSGT00390000008975	ENSGT00390000007552	ENSGT00940000154902	ENSGT00940000157679
Passeriformes_d	ANCESTRAL SPECIES	38	ENSGT00940000170110	ENSGT00940000157743	ENSGT00940000159147	ENSGT00390000016784	ENSGT00940000161776	ENSGT00940000155070	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00390000012424.a	ENSGT00940000159867	ENSGT00940000163054.b	ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000008374	ENSGT00390000008975	ENSGT00390000007552	ENSGT00940000154902	ENSGT00940000157679
Passeriformes_g	ANCESTRAL SPECIES	44	ENSGT00940000170110	ENSGT00940000157743	ENSGT00940000159147	ENSGT00390000016784	ENSGT00940000161776	ENSGT00940000155070	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00390000012424.a	ENSGT00940000159867	ENSGT00940000163054.b	ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000008374	ENSGT00390000008975	ENSGT00390000007552	ENSGT00940000154902	ENSGT00940000157679
Passeroidea	ANCESTRAL SPECIES	54						ENSGT00940000155070.c	ENSGT00940000154901.C.b.f.b.b.a.b	ENSGT00940000154901.C.b.f.b.b.a.a	ENSGT00940000154901.C.b.f.b.a.a	ENSGT00390000012424.a	ENSGT00940000159867	ENSGT00940000163054.b	ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589	ENSGT00940000160376	ENSGT01100000263497.B	ENSGT00390000011639	ENSGT00940000156457	ENSGT00390000008374	ENSGT00390000008975	ENSGT00390000007552	ENSGT00940000154902	ENSGT00940000157679
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	38							ENSTGUG00000029534	ENSTGUG00000028923	ENSTGUG00000020782	ENSTGUG00000029595	ENSTGUG00000024303	ENSTGUG00000027355	ENSTGUG00000023760	ENSTGUG00000029242	ENSTGUG00000027751 #19	ENSTGUG00000020420 #22	ENSTGUG00000026539 #23	ENSTGUG00000025733 #24	STX5 (ENSTGUG00000021933)	ENSTGUG00000027990	ENSTGUG00000022623	ENSTGUG00000020163	ENSTGUG00000022941	ENSTGUG00000020286	UBXN1 (ENSTGUG00000029060)	ENSTGUG00000025943	ENSTGUG00000022402	ENSTGUG00000026145	ENSTGUG00000024726	ENSTGUG00000019935	ENSTGUG00000019544
Zebra finch	MODERN SPECIES	38	ENSTGUG00000016038	MRPL49 (ENSTGUG00000021342)	ENSTGUG00000028151	ENSTGUG00000024413	ENSTGUG00000028595	ENSTGUG00000025700	ENSTGUG00000022802	ENSTGUG00000020056	ENSTGUG00000026404	ENSTGUG00000028070	ENSTGUG00000023063	ENSTGUG00000029491	ENSTGUG00000024470	ENSTGUG00000028550	ENSTGUG00000021779 #19	ENSTGUG00000026804 #22	ENSTGUG00000018975 #23	ENSTGUG00000023367	ENSTGUG00000019144 #24	ENSTGUG00000025402	ENSTGUG00000024672	ENSTGUG00000025536	ENSTGUG00000027721	ENSTGUG00000024709	ENSTGUG00000020446	ENSTGUG00000029251	ENSTGUG00000022895	ENSTGUG00000022510	ENSTGUG00000014456	ENSTGUG00000019257	ENSTGUG00000028725
Medium ground finch	MODERN SPECIES	544														ENSGFOG00000009857 #19	ENSGFOG00000009868	ENSGFOG00000009875 #22	NAA40 (ENSGFOG00000009883) #24
Neognathae_c	ANCESTRAL SPECIES	54												ENSGT00940000161363	ENSGT00900000141164	ENSGT00940000157482 #19	ENSGT00980000200147	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00960000189643	ENSGT01000000214440.C	ENSGT00390000007539	ENSGT00390000012589
Golden eagle	DUPLICATION
Golden eagle	MODERN SPECIES	72														ENSACCG00020012812 #19	ENSACCG00020012803	ENSACCG00020012550 #22	ENSACCG00020012394 #23	ENSACCG00020012361 #24	ENSACCG00020012323	ENSACCG00020012267	TMEM223 (ENSACCG00020012254)	ENSACCG00020016516
Golden eagle	MODERN SPECIES	37																ENSACCG00020011407 #22	ENSACCG00020011393 #23	ENSACCG00020011367 #24	ENSACCG00020011357
Kakapo	MODERN SPECIES	43							ENSSHBG00005008232	ENSSHBG00005008212	TRMT112 (ENSSHBG00005008201)	MUS81 (ENSSHBG00005008183)	PQBP1 (ENSSHBG00005008158)	OVOL1 (ENSSHBG00005008126)	PC (ENSSHBG00005008099)	ENSSHBG00005008081 #19	ENSSHBG00005008069	MARK2 (ENSSHBG00005008024) #22	RCOR2 (ENSSHBG00005007986) #23	NAA40 (ENSSHBG00005007970) #24	ENSSHBG00005007955	STX5 (ENSSHBG00005007945)	ENSSHBG00005007917	TMEM223 (ENSSHBG00005007894)	OTUB1 (ENSSHBG00005007861) #26
Galloanserae	ANCESTRAL SPECIES																	ENSGT00940000155031 #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000155031 #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00940000155031 #22
Turkey	DUPLICATION
Turkey	MODERN SPECIES	891																ENSMGAG00000018968 #22
Turkey	MODERN SPECIES	1238																ENSMGAG00000018090 #22
Anura	ANCESTRAL SPECIES	100											ENSGT00940000158566 #17	ENSGT00940000157482 #19	ENSGT00600000084617 #20	ENSGT00940000166053	ENSGT00940000166766	ENSGT00940000155031 #22	ENSGT00940000154196.a #23	ENSGT00390000014903 #24	ENSGT00390000006979.a #26	ENSGT00940000159375 #28	ENSGT00940000161450 #27	ENSGT00940000154911 #30	ENSGT00390000013444.a.b.b #31	ENSGT00390000002731 #32	ENSGT00510000048574 #34	ENSGT00390000017869 #33	ENSGT00940000157074 #36	ENSGT00950000182985.b.b #37	ENSGT00940000160539	ENSGT00940000164137	ENSGT00940000164916
Leishan spiny toad	MODERN SPECIES	1	ZNHIT2 (ENSLLEG00000029769)	ENSLLEG00000029752	TM7SF2 (ENSLLEG00000029548)	ENSLLEG00000029521	VPS51 (ENSLLEG00000029442)	EHD1 (ENSLLEG00000029388)	ENSLLEG00000029370	ENSLLEG00000029366	ENSLLEG00000029356	ENSLLEG00000029344	ATL3 (ENSLLEG00000029307) #17	ENSLLEG00000029260 #19	ENSLLEG00000029246	ENSLLEG00000029216 #20	ENSLLEG00000029188	MARK2 (ENSLLEG00000028973) #22	RCOR2 (ENSLLEG00000028850) #23	ENSLLEG00000028728 #24	ENSLLEG00000028678	ENSLLEG00000028666	OTUB1 (ENSLLEG00000028582) #26	ENSLLEG00000028567	MACROD1 (ENSLLEG00000028462) #27	FLRT1 (ENSLLEG00000028436) #28	ENSLLEG00000028418	STIP1 (ENSLLEG00000028304) #30	FERMT3 (ENSLLEG00000028011) #31	TRPT1 (ENSLLEG00000027923) #32	ENSLLEG00000027763 #34	ENSLLEG00000027738	NUDT22 (ENSLLEG00000027486) #33
Frog	MODERN SPECIES	4	ENSXETG00000005639	tut1 (ENSXETG00000005640)	eef1g (ENSXETG00000026372)	AHNAK (ENSXETG00000038117)	slc3a2 (ENSXETG00000019456)	stx5 (ENSXETG00000019453)	ENSXETG00000041844	nxf1 (ENSXETG00000019442)	wdr74 (ENSXETG00000019440)	atl3 (ENSXETG00000002686) #17	ENSXETG00000049358	htr6 (ENSXETG00000002694) #19	zfta (ENSXETG00000037021) #20	dusp10.2 (ENSXETG00000035848)	XB5901661 [provisional:rabepk] (ENSXETG00000032376)	mark2 (ENSXETG00000002704) #22	ENSXETG00000043061	rcor2 (ENSXETG00000002710) #23	naa40 (ENSXETG00000002713) #24	acta4 (ENSXETG00000002714)	otub1 (ENSXETG00000036208) #26	flrt1 (ENSXETG00000007180) #28	macrod1 (ENSXETG00000035769) #27	ENSXETG00000048237	stip1 (ENSXETG00000007189) #30	fermt3 (ENSXETG00000027692) #31	trpt1 (ENSXETG00000007196) #32	dnajc4 (ENSXETG00000007197) #34	vegfb (ENSXETG00000007183)	nudt22 (ENSXETG00000007198) #33	fkbp2 (ENSXETG00000046144) #36
Coelacanth	MODERN SPECIES	254	rarres3l (ENSLACG00000016982)	ENSLACG00000016948	TRPT1 (ENSLACG00000016922) #32	FERMT3 (ENSLACG00000016877) #31	STIP1 (ENSLACG00000016815) #30	ENSLACG00000016770 #27	FLRT1 (ENSLACG00000016740) #28	ENSLACG00000022107	ENSLACG00000015241	eef1g (ENSLACG00000014700)	ENSLACG00000022630	NUDT22 (ENSLACG00000013896) #33	FKBP2 (ENSLACG00000013806) #36	PPP1R14B (ENSLACG00000013601) #37	PLCB3 (ENSLACG00000013109)	MARK2 (ENSLACG00000012526) #22	RCOR2 (ENSLACG00000012299) #23	NAA40 (ENSLACG00000012164) #24	ACTA1 (ENSLACG00000012045)	slc8a4b (ENSLACG00000011133)	ENSLACG00000010718	ENSLACG00000022173	OTUB1 (ENSLACG00000010416) #26	DPF2 (ENSLACG00000010180)	ENSLACG00000009972	HNRNPUL2 (ENSLACG00000009304)	B3GAT3 (ENSLACG00000009189)	ENSLACG00000008975	ROM1 (ENSLACG00000008239)	TAF6L (ENSLACG00000008023)	TMEM179B (ENSLACG00000007887)