Sarcopterygii	ANCESTRAL SPECIES	429														ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00420000029926	ENSGT00950000182956.b.b.a.a.d	ENSGT00940000161485	ENSGT00940000163157	ENSGT01090000260003.a.b.a
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	552				KIF18B (ENSLACG00000016179)	ENSLACG00000015886	SNRNP70 (ENSLACG00000015684)	kcnc3a (ENSLACG00000015312)	ENSLACG00000014748	ENSLACG00000014592	ENSLACG00000013703	ENSLACG00000013062	ENSLACG00000012797	PRL (ENSLACG00000012742)	ENSLACG00000012241	DHDH (ENSLACG00000011719)	ENSLACG00000010885 #22	ENSLACG00000022321	ENSLACG00000010046	ENSLACG00000009209	ENSLACG00000007841	slc6a16b (ENSLACG00000006840)	ENSLACG00000006256	RPS11 (ENSLACG00000001903)
Coelacanth	MODERN SPECIES	343															ENSLACG00000017809	KRAS (ENSLACG00000017464) #22	ETFRF1 (ENSLACG00000017385) #23	DNAI7 (ENSLACG00000017304) #24	IRAG2 (ENSLACG00000017250) #25	ENSLACG00000017087	BCAT1 (ENSLACG00000016855) #26	SOX5 (ENSLACG00000012837) #30	ENSLACG00000012112	ETNK1 (ENSLACG00000010450) #31	PRPF18 (ENSLACG00000009885)	FRMD4A (ENSLACG00000006612)
Tetrapoda	ANCESTRAL SPECIES	264												ENSGT00970000198077	ENSGT00410000026259	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00940000163690
Anura	ANCESTRAL SPECIES	185	ENSGT00940000155264	ENSGT00390000012644	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000158771	ENSGT00390000009166	ENSGT00940000166365	ENSGT00940000166966	ENSGT00510000048192	ENSGT00950000182818.A.l	ENSGT00940000159110	ENSGT00970000198077	ENSGT00410000026259	ENSGT01010000229244	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00940000163690
Leishan spiny toad	DUPLICATION
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000028148	ENSLLEG00000028093	ENSLLEG00000028060	ENSLLEG00000027796	ENSLLEG00000027764	ENSLLEG00000027747	ENSLLEG00000027499	ENSLLEG00000027377	ENSLLEG00000027336	ENSLLEG00000027314	ENSLLEG00000026809	ENSLLEG00000026727	ENSLLEG00000026703	ENSLLEG00000026658	ENSLLEG00000026628	ENSLLEG00000026601 #22	ENSLLEG00000026416	ENSLLEG00000026288	ENSLLEG00000026121	MYBPC2 (ENSLLEG00000025574)	ENSLLEG00000025510	ENSLLEG00000025351	LENG8 (ENSLLEG00000025226)	ENSLLEG00000025206	ENSLLEG00000025157	TTYH1 (ENSLLEG00000024509)	MEGF8 (ENSLLEG00000024192)	ENSLLEG00000024104	ENSLLEG00000024082	ENSLLEG00000024037	ENSLLEG00000024007
Leishan spiny toad	MODERN SPECIES	5	CXADR (ENSLLEG00000011837)	BTG3 (ENSLLEG00000011799)	C21orf91 (ENSLLEG00000011754)	ENSLLEG00000011726	CHODL (ENSLLEG00000011643)	ENSLLEG00000011617	TMPRSS15 (ENSLLEG00000011528)	ENSLLEG00000011490	ENSLLEG00000011469	ENSLLEG00000011436	NCAM2 (ENSLLEG00000011237)	ENSLLEG00000011154	ENSLLEG00000011087	ENSLLEG00000010988	ENSLLEG00000010965	ENSLLEG00000010918 #22	ENSLLEG00000010871	MRPL39 (ENSLLEG00000010567)	JAM2 (ENSLLEG00000010385)	ATP5PF (ENSLLEG00000010293)	GABPA (ENSLLEG00000010125)	ENSLLEG00000010081	APP (ENSLLEG00000008369)	CYYR1 (ENSLLEG00000008233)	ENSLLEG00000008192	ADAMTS1 (ENSLLEG00000008134)	ADAMTS5 (ENSLLEG00000008066)	ENSLLEG00000008026	ENSLLEG00000008012	ENSLLEG00000008008	LTN1 (ENSLLEG00000007311)
Leishan spiny toad	MODERN SPECIES	1724																KRAS (ENSLLEG00000024909) #22	ETFRF1 (ENSLLEG00000024867) #23
Frog	DUPLICATION
Frog	MODERN SPECIES	7	nucb1 (ENSXETG00000021229)	tulp2 (ENSXETG00000021227)	dhdh (ENSXETG00000033613)	dhdh-like.1 (ENSXETG00000027480)	otogl2 (ENSXETG00000021226)	ENSXETG00000021225	aldh16a1 (ENSXETG00000003403)	pih1d1 (ENSXETG00000003401)	prl.2 (ENSXETG00000035107)	slc17a7 (ENSXETG00000040347)	ENSXETG00000037398	ENSXETG00000038465	ENSXETG00000037389	ENSXETG00000032026	gal.2 (ENSXETG00000038950)	kras (ENSXETG00000003398) ##22	ccdc155l (ENSXETG00000048776)	ENSXETG00000038937	tead4 (ENSXETG00000036112)	mybpc2 (ENSXETG00000003393)	XB5748694 [provisional:cdc42ep4] (ENSXETG00000012234)	ENSXETG00000038090	leng9 (ENSXETG00000037341)	ttyh1 (ENSXETG00000003389)	ENSXETG00000041466	ENSXETG00000043023	xilr2 (ENSXETG00000032533)	ENSXETG00000048361	ENSXETG00000035217	xilr4 (ENSXETG00000042508)	xilr1 (ENSXETG00000032630)
Frog	MODERN SPECIES	3	ppfibp1 (ENSXETG00000016522) #7	endoul (ENSXETG00000016505) #8	fgfr1op2 (ENSXETG00000016502) #9	ints13 (ENSXETG00000047046) #10	itpr2 (ENSXETG00000016448) #11	SSPN (ENSXETG00000046931) #12	bhlhe41 (ENSXETG00000045299) #13	RASSF8 (ENSXETG00000037861) #14	ENSXETG00000046325 #15	rab43 (ENSXETG00000049287) #16	cecr5 (ENSXETG00000048547) #17	ENSXETG00000046920 #18	nrip3 (ENSXETG00000041020) #19	ENSXETG00000045065 #20	ENSXETG00000038333 #21	krasl (ENSXETG00000043145) #22	etfrf1 (ENSXETG00000046152) #23	dnai7 (ENSXETG00000048107) #24	irag2 (ENSXETG00000030622) #25	bcat1 (ENSXETG00000048484) #26	ENSXETG00000049280 #27	ENSXETG00000047798 #28	ENSXETG00000044512 #29	sox5 (ENSXETG00000026458) #30	ETNK1 (ENSXETG00000042522) #31	c2cd5 (ENSXETG00000048325) #32	sult6b1l (ENSXETG00000036121) #33	iapp (ENSXETG00000042033) #34	pyroxd1 (ENSXETG00000044644) #35	recql (ENSXETG00000013524) #36	golt1b (ENSXETG00000047518) #37
Amniota	ANCESTRAL SPECIES	49	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00540000073481
Mammalia	ANCESTRAL SPECIES	70	ENSGT01050000244951.a.a ##7	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00540000073481
Platypus	MODERN SPECIES	11	SRGAP1 (ENSOANG00000047717)	KICS2 (ENSOANG00000043854)	RPL18A (ENSOANG00000009129)	PPFIBP1 (ENSOANG00000006286) ##7	STK38L (ENSOANG00000030510)	MED21 (ENSOANG00000040060)	TM7SF3 (ENSOANG00000044283)	FGFR1OP2 (ENSOANG00000047307) #9	ENSOANG00000049521	INTS13 (ENSOANG00000020224) #10	ITPR2 (ENSOANG00000047995) #11	SSPN (ENSOANG00000045085) #12	ENSOANG00000040055 #13	RASSF8 (ENSOANG00000046756) #14	ENSOANG00000043766	KRAS (ENSOANG00000037990) #22	ETFRF1 (ENSOANG00000012351) #23	ENSOANG00000045289 #24	ENSOANG00000038600 #25	BCAT1 (ENSOANG00000013411) #26	SOX5 (ENSOANG00000042173) #30	ETNK1 (ENSOANG00000041921) #31	C2CD5 (ENSOANG00000031241) #32	ST8SIA1 (ENSOANG00000047410)	CMAS (ENSOANG00000011047)	ABCC9 (ENSOANG00000045837)	KCNJ8 (ENSOANG00000010537)	LDHB (ENSOANG00000010493)	ENSOANG00000030957	GYS2 (ENSOANG00000049261)	GOLT1B (ENSOANG00000049456) #37
Theria	ANCESTRAL SPECIES	2	ENSGT00940000153380.A	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00390000018612.a.b
Eutheria	ANCESTRAL SPECIES	1	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b	ENSGT00390000018612.a.b
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Primates	ANCESTRAL SPECIES	6	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Bushbaby	MODERN SPECIES	172	PPFIBP1 (ENSOGAG00000010615) ##7	ENSOGAG00000032700	SMCO2 (ENSOGAG00000005287)	ENSOGAG00000024687	BMAL2 (ENSOGAG00000011668)	STK38L (ENSOGAG00000028901)	MED21 (ENSOGAG00000011215)	FGFR1OP2 (ENSOGAG00000003431) #9	INTS13 (ENSOGAG00000009801) #10	ITPR2 (ENSOGAG00000009785) #11	SSPN (ENSOGAG00000028077) #12	ENSOGAG00000032001 #13	RASSF8 (ENSOGAG00000026328) #14	ENSOGAG00000026045	ENSOGAG00000011065	KRAS (ENSOGAG00000014812) #22	ETFRF1 (ENSOGAG00000014810) #23	DNAI7 (ENSOGAG00000014801) #24	IRAG2 (ENSOGAG00000014796) #25	BCAT1 (ENSOGAG00000013677) #26	SOX5 (ENSOGAG00000002524) #30	ETNK1 (ENSOGAG00000033436) #31	C2CD5 (ENSOGAG00000016517) #32	ST8SIA1 (ENSOGAG00000001971)	ENSOGAG00000025469 #33	CMAS (ENSOGAG00000001973)	ABCC9 (ENSOGAG00000016970)	KCNJ8 (ENSOGAG00000031573)	LDHB (ENSOGAG00000004763)	GYS2 (ENSOGAG00000004760)	SPX (ENSOGAG00000004759)
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT01030000236698	ENSGT00940000155653.a	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b
Lemuriformes_a	ANCESTRAL SPECIES	8	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT01030000236698	ENSGT00940000155653.a	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b
Greater bamboo lemur	MODERN SPECIES	261				MED21 (ENSPSMG00000018193)	TM7SF3 (ENSPSMG00000018210)	FGFR1OP2 (ENSPSMG00000018233) #9	ENSPSMG00000018245	INTS13 (ENSPSMG00000018258) #10	ITPR2 (ENSPSMG00000018351) #11	ENSPSMG00000018385	SSPN (ENSPSMG00000018398) #12	BHLHE41 (ENSPSMG00000018412) #13	ENSPSMG00000018416	RASSF8 (ENSPSMG00000018430) #14	LMNTD1 (ENSPSMG00000018464)	KRAS (ENSPSMG00000018515) #22	ENSPSMG00000018579	DUSP11 (ENSPSMG00000018582)	ENSPSMG00000018599	ENSPSMG00000018607	STAMBP (ENSPSMG00000018623)	ACTG2 (ENSPSMG00000018760)	DGUOK (ENSPSMG00000019039)	ENSPSMG00000019048	TET3 (ENSPSMG00000019051)	BOLA3 (ENSPSMG00000019068)	MOB1A (ENSPSMG00000019086)	ENSPSMG00000019129	SLC4A5 (ENSPSMG00000019271)	DCTN1 (ENSPSMG00000019977)	C2orf81 (ENSPSMG00000020144)
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501	ENSGT00390000014507.a #37
Tarsier	MODERN SPECIES	5000																KRAS (ENSTSYG00000032750) #22	ETFRF1 (ENSTSYG00000009631) #23	DNAI7 (ENSTSYG00000006314) #24	ENSTSYG00000006305 #25	BCAT1 (ENSTSYG00000010788) #26
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000153380.A	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501	ENSGT00390000014507.a #37
Catarrhini	ANCESTRAL SPECIES	4	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b	ENSGT00390000018612.a.b
Hominoidea	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b
Gibbon	MODERN SPECIES	15	PPFIBP1 (ENSNLEG00000005508) ##7	SMCO2 (ENSNLEG00000005501)	BMAL2 (ENSNLEG00000005463)	STK38L (ENSNLEG00000005439)	C12orf71 (ENSNLEG00000005438)	MED21 (ENSNLEG00000005431)	TM7SF3 (ENSNLEG00000005416)	FGFR1OP2 (ENSNLEG00000005400) #9	ENSNLEG00000036090	INTS13 (ENSNLEG00000005368) #10	ITPR2 (ENSNLEG00000005317) #11	SSPN (ENSNLEG00000033111) #12	BHLHE41 (ENSNLEG00000005307) #13	RASSF8 (ENSNLEG00000005293) #14	LMNTD1 (ENSNLEG00000005275)	KRAS (ENSNLEG00000027684) #22	ETFRF1 (ENSNLEG00000005260) #23	DNAI7 (ENSNLEG00000005202) #24	ENSNLEG00000005126 #25	ENSNLEG00000005199	BCAT1 (ENSNLEG00000005083) #26	ENSNLEG00000030792	SOX5 (ENSNLEG00000005036) #30	ETNK1 (ENSNLEG00000005027) #31	C2CD5 (ENSNLEG00000004994) #32	ST8SIA1 (ENSNLEG00000004978)	CMAS (ENSNLEG00000004937)	ABCC9 (ENSNLEG00000004911)	KCNJ8 (ENSNLEG00000004907)	LDHB (ENSNLEG00000004858)	GYS2 (ENSNLEG00000004843)
Hominidae	ANCESTRAL SPECIES	4	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b
Orangutan	MODERN SPECIES	3	PPFIBP1 (ENSPPYG00000004381) ##7	SMCO2 (ENSPPYG00000035944)	BMAL2 (ENSPPYG00000004380)	STK38L (ENSPPYG00000004379)	C12orf71 (ENSPPYG00000004378)	MED21 (ENSPPYG00000040114)	TM7SF3 (ENSPPYG00000004376)	FGFR1OP2 (ENSPPYG00000035340) #9	INTS13 (ENSPPYG00000029635) #10	ITPR2 (ENSPPYG00000004374) #11	SSPN (ENSPPYG00000034586) #12	BHLHE41 (ENSPPYG00000004372) #13	RASSF8 (ENSPPYG00000004371) #14	LMNTD1 (ENSPPYG00000004370)	ENSPPYG00000030909	KRAS (ENSPPYG00000041739) #22	ENSPPYG00000034871	ETFRF1 (ENSPPYG00000004368) #23	DNAI7 (ENSPPYG00000038936) #24	ENSPPYG00000005175 #25	BCAT1 (ENSPPYG00000004365) #26	SOX5 (ENSPPYG00000004363) #30	ETNK1 (ENSPPYG00000040411) #31	C2CD5 (ENSPPYG00000004361) #32	ST8SIA1 (ENSPPYG00000004360)	CMAS (ENSPPYG00000004359)	ABCC9 (ENSPPYG00000004358)	KCNJ8 (ENSPPYG00000004357)	LDHB (ENSPPYG00000004356)	GYS2 (ENSPPYG00000004355)	SPX (ENSPPYG00000037855)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b
Gorilla	MODERN SPECIES	3	ENSGGOG00000013445	BMAL2 (ENSGGOG00000007332)	STK38L (ENSGGOG00000001820)	C12orf71 (ENSGGOG00000013185)	MED21 (ENSGGOG00000016313)	TM7SF3 (ENSGGOG00000016299)	FGFR1OP2 (ENSGGOG00000023849) #9	ENSGGOG00000043459	INTS13 (ENSGGOG00000011827) #10	ITPR2 (ENSGGOG00000008010) #11	SSPN (ENSGGOG00000007092) #12	BHLHE41 (ENSGGOG00000015498) #13	ENSGGOG00000026044	LMNTD1 (ENSGGOG00000008836)	ENSGGOG00000036425	KRAS (ENSGGOG00000008043) #22	ETFRF1 (ENSGGOG00000008571) #23	DNAI7 (ENSGGOG00000011368) #24	ENSGGOG00000003082 #25	ENSGGOG00000027972	ENSGGOG00000026884	BCAT1 (ENSGGOG00000009816) #26	ENSGGOG00000037786	SOX5 (ENSGGOG00000016264) #30	ETNK1 (ENSGGOG00000004013) #31	C2CD5 (ENSGGOG00000013081) #32	ST8SIA1 (ENSGGOG00000001398)	CMAS (ENSGGOG00000015061)	ABCC9 (ENSGGOG00000023368)	KCNJ8 (ENSGGOG00000008956)	ENSGGOG00000015758
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT01100000263940	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00390000014814.a.b.a.a.b	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b
Pan	ANCESTRAL SPECIES	4	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT01100000263940	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00390000000987.b	ENSGT00910000144343	ENSGT00390000014814.a.b.a.a.b	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT01040000242138	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b
Bonobo	MODERN SPECIES	3	BMAL2 (ENSPPAG00000040196)	STK38L (ENSPPAG00000028856)	ENSPPAG00000030904 ##7	C12orf71 (ENSPPAG00000039705)	MED21 (ENSPPAG00000031067)	TM7SF3 (ENSPPAG00000033125)	FGFR1OP2 (ENSPPAG00000032185) #9	ENSPPAG00000007845	INTS13 (ENSPPAG00000012301) #10	ITPR2 (ENSPPAG00000027820) #11	SSPN (ENSPPAG00000032921) #12	ENSPPAG00000035875 #13	RASSF8 (ENSPPAG00000031944) #14	ENSPPAG00000041642	LMNTD1 (ENSPPAG00000019285)	KRAS (ENSPPAG00000038418) #22	ETFRF1 (ENSPPAG00000039750) #23	DNAI7 (ENSPPAG00000029931) #24	ENSPPAG00000030103 #25	ENSPPAG00000034604	BCAT1 (ENSPPAG00000029336) #26	ENSPPAG00000031238	SOX5 (ENSPPAG00000035103) #30	ETNK1 (ENSPPAG00000041246) #31	C2CD5 (ENSPPAG00000037476) #32	ST8SIA1 (ENSPPAG00000040964)	CMAS (ENSPPAG00000039714)	ABCC9 (ENSPPAG00000034422)	KCNJ8 (ENSPPAG00000040399)	LDHB (ENSPPAG00000033626)	GYS2 (ENSPPAG00000042144)
Chimpanzee	MODERN SPECIES	3	STK38L (ENSPTRG00000004787)	ENSPTRG00000050206 ##7	C12H12orf71 (ENSPTRG00000034261)	MED21 (ENSPTRG00000004785)	TM7SF3 (ENSPTRG00000004784)	FGFR1OP2 (ENSPTRG00000004783) #9	ENSPTRG00000044155	INTS13 (ENSPTRG00000004782) #10	ITPR2 (ENSPTRG00000004781) #11	SSPN (ENSPTRG00000004780) #12	BHLHE41 (ENSPTRG00000004779) #13	RASSF8 (ENSPTRG00000004778) #14	ENSPTRG00000042053	LMNTD1 (ENSPTRG00000004776)	ENSPTRG00000048694	KRAS (ENSPTRG00000004775) #22	ETFRF1 (ENSPTRG00000042785) #23	DNAI7 (ENSPTRG00000004774) #24	IRAG2 (ENSPTRG00000004773) #25	ENSPTRG00000042522	ENSPTRG00000040566	BCAT1 (ENSPTRG00000004772) #26	ENSPTRG00000051787	SOX5 (ENSPTRG00000004770) #30	ETNK1 (ENSPTRG00000004768) #31	C2CD5 (ENSPTRG00000004767) #32	ST8SIA1 (ENSPTRG00000050648)	CMAS (ENSPTRG00000004765)	ABCC9 (ENSPTRG00000004764)	KCNJ8 (ENSPTRG00000004763)	LDHB (ENSPTRG00000004762)
Human	MODERN SPECIES	3	REP15 (ENSG00000174236)	PPFIBP1 (ENSG00000110841) ##7	SMCO2 (ENSG00000165935)	BMAL2 (ENSG00000029153)	STK38L (ENSG00000211455)	C12orf71 (ENSG00000214700)	MED21 (ENSG00000152944)	TM7SF3 (ENSG00000064115)	FGFR1OP2 (ENSG00000111790) #9	INTS13 (ENSG00000064102) #10	ITPR2 (ENSG00000123104) #11	SSPN (ENSG00000123096) #12	BHLHE41 (ENSG00000123095) #13	RASSF8 (ENSG00000123094) #14	LMNTD1 (ENSG00000152936)	KRAS (ENSG00000133703) #22	ETFRF1 (ENSG00000205707) #23	DNAI7 (ENSG00000118307) #24	IRAG2 (ENSG00000118308) #25	BCAT1 (ENSG00000060982) #26	SOX5 (ENSG00000134532) #30	ETNK1 (ENSG00000139163) #31	C2CD5 (ENSG00000111731) #32	ST8SIA1 (ENSG00000111728)	CMAS (ENSG00000111726)	ABCC9 (ENSG00000069431)	KCNJ8 (ENSG00000121361)	LDHB (ENSG00000111716)	GYS2 (ENSG00000111713)	SPX (ENSG00000134548)	GOLT1B (ENSG00000111711) #37
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT01100000263940	ENSGT00390000018003.b.s #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b	ENSGT00390000018612.a.b
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT01100000263940	ENSGT00390000018003.b.s #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00560000078473	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b	ENSGT00390000018612.a.b
Vervet Monkey	MODERN SPECIES	2	REP15 (ENSCSAG00000019244)	PPFIBP1 (ENSCSAG00000007602) ##7	SMCO2 (ENSCSAG00000007630)	BMAL2 (ENSCSAG00000007636)	STK38L (ENSCSAG00000007644)	C12orf71 (ENSCSAG00000007649)	MED21 (ENSCSAG00000007653)	TM7SF3 (ENSCSAG00000007661)	FGFR1OP2 (ENSCSAG00000007670) #9	INTS13 (ENSCSAG00000007677) #10	ITPR2 (ENSCSAG00000007690) #11	SSPN (ENSCSAG00000007717) #12	BHLHE41 (ENSCSAG00000007728) #13	RASSF8 (ENSCSAG00000007736) #14	LMNTD1 (ENSCSAG00000007754)	KRAS (ENSCSAG00000007777) #22	ETFRF1 (ENSCSAG00000007787) #23	DNAI7 (ENSCSAG00000007796) #24	ENSCSAG00000007824	IRAG2 (ENSCSAG00000007840) #25	ENSCSAG00000007850	ENSCSAG00000019243	BCAT1 (ENSCSAG00000007862) #26	SOX5 (ENSCSAG00000007872) #30	ETNK1 (ENSCSAG00000007885) #31	C2CD5 (ENSCSAG00000007900) #32	ST8SIA1 (ENSCSAG00000007905)	CMAS (ENSCSAG00000007912)	ABCC9 (ENSCSAG00000007930)	KCNJ8 (ENSCSAG00000007933)	LDHB (ENSCSAG00000007940)
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT01100000263940	ENSGT00390000018003.b.s #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000160423	ENSGT00940000153544.b.h	ENSGT00940000169031	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b.s #9	ENSGT01100000263940	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501
Olive baboon	MODERN SPECIES	19	STK38L (ENSPANG00000001154)	C12orf71 (ENSPANG00000001153)	ENSPANG00000041008	ENSPANG00000039716	MED21 (ENSPANG00000013655)	TM7SF3 (ENSPANG00000007817)	FGFR1OP2 (ENSPANG00000001088) #9	INTS13 (ENSPANG00000001087) #10	ITPR2 (ENSPANG00000013066) #11	SSPN (ENSPANG00000004581) #12	BHLHE41 (ENSPANG00000038795) #13	RASSF8 (ENSPANG00000012636) #14	LMNTD1 (ENSPANG00000024425)	ENSPANG00000043398	ENSPANG00000042041	ENSPANG00000013197 #22	ETFRF1 (ENSPANG00000044084) #23	DNAI7 (ENSPANG00000003393) #24	ENSPANG00000018182 #25	BCAT1 (ENSPANG00000013681) #26	ENSPANG00000049022	ENSPANG00000042970	SOX5 (ENSPANG00000016894) #30	ETNK1 (ENSPANG00000015390) #31	C2CD5 (ENSPANG00000021904) #32	ST8SIA1 (ENSPANG00000012259)	CMAS (ENSPANG00000001985)	ABCC9 (ENSPANG00000005518)	KCNJ8 (ENSPANG00000048537)	LDHB (ENSPANG00000003488)	GYS2 (ENSPANG00000005479)
Cercopithecinae_d	ANCESTRAL SPECIES	55	ENSGT00940000160423	ENSGT00940000153544.b.h	ENSGT00940000169031	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b.s #9	ENSGT01100000263940	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000155774.b.j	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a.b	ENSGT00940000153525.g.b.b.a.b.b
Drill	MODERN SPECIES	1148																KRAS (ENSMLEG00000028386) #22	ETFRF1 (ENSMLEG00000040928) #23	DNAI7 (ENSMLEG00000040204) #24	ENSMLEG00000028765 #25	BCAT1 (ENSMLEG00000042739) #26	SOX5 (ENSMLEG00000032874) #30
Sooty mangabey	MODERN SPECIES	643															LMNTD1 (ENSCATG00000031002)	KRAS (ENSCATG00000030021) #22	ENSCATG00000032146	DNAI7 (ENSCATG00000042312) #24	ENSCATG00000037664 #25	BCAT1 (ENSCATG00000044244) #26	ENSCATG00000045024	SOX5 (ENSCATG00000034740) #30	ETNK1 (ENSCATG00000032053) #31	C2CD5 (ENSCATG00000009084) #32	ST8SIA1 (ENSCATG00000041960)	ENSCATG00000038188	CMAS (ENSCATG00000013973)	ABCC9 (ENSCATG00000039700)	KCNJ8 (ENSCATG00000014719)	LDHB (ENSCATG00000042742)	GYS2 (ENSCATG00000044601)
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT01100000263940	ENSGT00390000018003.b.s #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00940000155037.z	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501	ENSGT00390000014507.a #37
Pig-tailed macaque	MODERN SPECIES	187	STK38L (ENSMNEG00000031026)	C12orf71 (ENSMNEG00000028919)	MED21 (ENSMNEG00000039549)	TM7SF3 (ENSMNEG00000037627)	ENSMNEG00000024553	FGFR1OP2 (ENSMNEG00000029096) #9	INTS13 (ENSMNEG00000045424) #10	ENSMNEG00000029346	ITPR2 (ENSMNEG00000022353) #11	ENSMNEG00000038447	ENSMNEG00000030540	SSPN (ENSMNEG00000029357) #12	BHLHE41 (ENSMNEG00000037151) #13	RASSF8 (ENSMNEG00000031029) #14	LMNTD1 (ENSMNEG00000039772)	KRAS (ENSMNEG00000045179) #22	ETFRF1 (ENSMNEG00000000006) #23	DNAI7 (ENSMNEG00000043789) #24	ENSMNEG00000041822	ENSMNEG00000028506 #25	BCAT1 (ENSMNEG00000041910) #26	SOX5 (ENSMNEG00000034960) #30	ETNK1 (ENSMNEG00000031845) #31	C2CD5 (ENSMNEG00000027964) #32	ST8SIA1 (ENSMNEG00000030673)	CMAS (ENSMNEG00000044740)	ABCC9 (ENSMNEG00000045266)	KCNJ8 (ENSMNEG00000031377)	LDHB (ENSMNEG00000032799)	GYS2 (ENSMNEG00000037629)	SPX (ENSMNEG00000019671)
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b.s #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.a.a.a.b.a	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.a.d.a.a.b	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.a.b.b.b	ENSGT00390000018612.a.b	ENSGT00390000012501
Rhesus	MODERN SPECIES	2	SMCO2 (ENSMMUG00000021736)	ARNTL2 (ENSMMUG00000023249)	STK38L (ENSMMUG00000023248)	C11H12orf71 (ENSMMUG00000004106)	MED21 (ENSMMUG00000003218)	TM7SF3 (ENSMMUG00000003217)	FGFR1OP2 (ENSMMUG00000006468) #9	INTS13 (ENSMMUG00000006466) #10	ITPR2 (ENSMMUG00000023128) #11	ENSMMUG00000050627	SSPN (ENSMMUG00000018630) #12	BHLHE41 (ENSMMUG00000039562) #13	RASSF8 (ENSMMUG00000018385) #14	LMNTD1 (ENSMMUG00000009601)	ENSMMUG00000059361	KRAS (ENSMMUG00000015381) #22	ETFRF1 (ENSMMUG00000042111) #23	DNAI7 (ENSMMUG00000015377) #24	ENSMMUG00000038348	IRAG2 (ENSMMUG00000015374) #25	ENSMMUG00000065144	BCAT1 (ENSMMUG00000012223) #26	ENSMMUG00000057276	SOX5 (ENSMMUG00000020370) #30	ENSMMUG00000048030	ETNK1 (ENSMMUG00000006643) #31	C2CD5 (ENSMMUG00000006641) #32	ST8SIA1 (ENSMMUG00000003685)	ENSMMUG00000059535	CMAS (ENSMMUG00000020808)	ABCC9 (ENSMMUG00000020806)
Crab-eating macaque	MODERN SPECIES	2	BMAL2 (ENSMFAG00000002262)	STK38L (ENSMFAG00000030945)	C12orf71 (ENSMFAG00000039958)	MED21 (ENSMFAG00000041759)	TM7SF3 (ENSMFAG00000041364)	FGFR1OP2 (ENSMFAG00000043095) #9	INTS13 (ENSMFAG00000041404) #10	ENSMFAG00000049957	ITPR2 (ENSMFAG00000035688) #11	ENSMFAG00000056007	ENSMFAG00000055781	SSPN (ENSMFAG00000045387) #12	BHLHE41 (ENSMFAG00000051510) #13	RASSF8 (ENSMFAG00000001620) #14	LMNTD1 (ENSMFAG00000030035)	KRAS (ENSMFAG00000047411) #22	ENSMFAG00000056709	ETFRF1 (ENSMFAG00000041072) #23	DNAI7 (ENSMFAG00000032055) #24	ENSMFAG00000041885 #25	BCAT1 (ENSMFAG00000003944) #26	SOX5 (ENSMFAG00000033855) #30	ETNK1 (ENSMFAG00000056470) #31	C2CD5 (ENSMFAG00000038900) #32	ST8SIA1 (ENSMFAG00000042675)	ENSMFAG00000059978	CMAS (ENSMFAG00000032764)	ABCC9 (ENSMFAG00000041870)	KCNJ8 (ENSMFAG00000034423)	LDHB (ENSMFAG00000032247)	GYS2 (ENSMFAG00000002312)
Rhinopithecus	ANCESTRAL SPECIES	65	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000018322	ENSGT00390000014557	ENSGT00390000008702	ENSGT01100000263940	ENSGT00390000018003.b.s #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810.e #23	ENSGT00390000004708.d #24	ENSGT01030000236698	ENSGT00390000004708.c #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00500000044955.j.b	ENSGT00940000156122.g #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b.f	ENSGT00940000156680.b.b.e	ENSGT00990000203615.a.a.b
Black snub-nosed monkey	MODERN SPECIES	2579			MED21 (ENSRBIG00000032391)	TM7SF3 (ENSRBIG00000027607)	ENSRBIG00000024015	FGFR1OP2 (ENSRBIG00000040847) #9	INTS13 (ENSRBIG00000038639) #10	ITPR2 (ENSRBIG00000035254) #11	ENSRBIG00000029333	ENSRBIG00000044357	SSPN (ENSRBIG00000012155) #12	BHLHE41 (ENSRBIG00000032629) #13	RASSF8 (ENSRBIG00000035003) #14	ENSRBIG00000027828	LMNTD1 (ENSRBIG00000044203)	KRAS (ENSRBIG00000037160) #22	ENSRBIG00000041334	DNAI7 (ENSRBIG00000035616) #24	ENSRBIG00000005977 #25	BCAT1 (ENSRBIG00000028607) #26
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1722																ENSRROG00000040068 #22	ETFRF1 (ENSRROG00000017226) #23	ENSRROG00000036052 #24
Golden snub-nosed monkey	MODERN SPECIES	683																ENSRROG00000029155 #22	FAM83B (ENSRROG00000032277)	HCRTR2 (ENSRROG00000044179)	GFRAL (ENSRROG00000029846)	HMGCLL1 (ENSRROG00000037696)
Platyrrhini	ANCESTRAL SPECIES	44	ENSGT00940000153380.A	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Mas night monkey	MODERN SPECIES	1110	SMCO2 (ENSANAG00000030042)	BMAL2 (ENSANAG00000034090)	STK38L (ENSANAG00000025609)	ENSANAG00000023438	MED21 (ENSANAG00000025951)	TM7SF3 (ENSANAG00000030204)	FGFR1OP2 (ENSANAG00000035478) #9	INTS13 (ENSANAG00000022317) #10	ITPR2 (ENSANAG00000022196) #11	SSPN (ENSANAG00000025202) #12	ENSANAG00000031081	BHLHE41 (ENSANAG00000035475) #13	RASSF8 (ENSANAG00000019236) #14	LMNTD1 (ENSANAG00000015391)	ENSANAG00000020670	KRAS (ENSANAG00000030296) #22	ENSANAG00000020002	DNAI7 (ENSANAG00000030533) #24	ENSANAG00000031949 #25	BCAT1 (ENSANAG00000024086) #26	SOX5 (ENSANAG00000035934) #30	ENSANAG00000019454	ENSANAG00000028516	ETNK1 (ENSANAG00000028253) #31	C2CD5 (ENSANAG00000029541) #32	ST8SIA1 (ENSANAG00000027332)	CMAS (ENSANAG00000012777)	ABCC9 (ENSANAG00000029123)	KCNJ8 (ENSANAG00000036917)	ENSANAG00000031606
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000153380.A	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Marmoset	MODERN SPECIES	21	REP15 (ENSCJAG00000054786)	PPFIBP1 (ENSCJAG00000038353) ##7	SMCO2 (ENSCJAG00000041251)	BMAL2 (ENSCJAG00000046502)	STK38L (ENSCJAG00000041419)	C12orf71 (ENSCJAG00000072248)	MED21 (ENSCJAG00000083235)	TM7SF3 (ENSCJAG00000046477)	FGFR1OP2 (ENSCJAG00000043357) #9	INTS13 (ENSCJAG00000044044) #10	ITPR2 (ENSCJAG00000047807) #11	SSPN (ENSCJAG00000041997) #12	BHLHE41 (ENSCJAG00000045144) #13	RASSF8 (ENSCJAG00000038818) #14	LMNTD1 (ENSCJAG00000045286)	KRAS (ENSCJAG00000044757) #22	ETFRF1 (ENSCJAG00000082700) #23	DNAI7 (ENSCJAG00000038718) #24	ENSCJAG00000047139 #25	BCAT1 (ENSCJAG00000044064) #26	SOX5 (ENSCJAG00000044866) #30	ETNK1 (ENSCJAG00000042185) #31	ENSCJAG00000072867	C2CD5 (ENSCJAG00000047559) #32	ST8SIA1 (ENSCJAG00000039573)	CMAS (ENSCJAG00000041487)	ABCC9 (ENSCJAG00000042358)	KCNJ8 (ENSCJAG00000041578)	ENSCJAG00000086464	ENSCJAG00000047275	GYS2 (ENSCJAG00000044223)
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000153380.A	ENSGT01100000266953	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00910000147260	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a.h	ENSGT00390000018612.a.b	ENSGT00390000012501	ENSGT00390000014507.a #37
Capuchin	MODERN SPECIES	25															ENSCCAG00000031032	KRAS (ENSCCAG00000031963) #22	ETFRF1 (ENSCCAG00000029415) #23	DNAI7 (ENSCCAG00000022275) #24	ENSCCAG00000027617 #25	BCAT1 (ENSCCAG00000008709) #26	ENSCCAG00000033195	SOX5 (ENSCCAG00000018382) #30	ENSCCAG00000023546	ETNK1 (ENSCCAG00000033844) #31	C2CD5 (ENSCCAG00000036282) #32	ST8SIA1 (ENSCCAG00000029200)	CMAS (ENSCCAG00000026094)	ABCC9 (ENSCCAG00000021984)	KCNJ8 (ENSCCAG00000020882)	ENSCCAG00000036355	GYS2 (ENSCCAG00000029055)
Bolivian squirrel monkey	MODERN SPECIES	60	PPFIBP1 (ENSSBOG00000019194) ##7	SMCO2 (ENSSBOG00000028718)	ENSSBOG00000026212	BMAL2 (ENSSBOG00000029898)	STK38L (ENSSBOG00000027436)	MED21 (ENSSBOG00000025603)	TM7SF3 (ENSSBOG00000027680)	ENSSBOG00000013153	FGFR1OP2 (ENSSBOG00000026484) #9	INTS13 (ENSSBOG00000020959) #10	ITPR2 (ENSSBOG00000027480) #11	SSPN (ENSSBOG00000023830) #12	BHLHE41 (ENSSBOG00000021412) #13	RASSF8 (ENSSBOG00000021926) #14	LMNTD1 (ENSSBOG00000026881)	KRAS (ENSSBOG00000022477) #22	ETFRF1 (ENSSBOG00000025823) #23	DNAI7 (ENSSBOG00000028936) #24	ENSSBOG00000019545 #25	ENSSBOG00000033246	BCAT1 (ENSSBOG00000019950) #26	SOX5 (ENSSBOG00000035936) #30	ETNK1 (ENSSBOG00000032121) #31	C2CD5 (ENSSBOG00000030915) #32	ST8SIA1 (ENSSBOG00000025152)	CMAS (ENSSBOG00000021172)	ABCC9 (ENSSBOG00000021746)	KCNJ8 (ENSSBOG00000025235)	ENSSBOG00000026007	GYS2 (ENSSBOG00000034889)	SPX (ENSSBOG00000033488)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Tree shrew	MODERN SPECIES	1505																KRAS (ENSTBEG00000003830) #22
Glires	ANCESTRAL SPECIES	4	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Rodentia	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00940000153525.g.a	ENSGT00390000018612.a.b
Sciuridae	ANCESTRAL SPECIES	15	ENSGT01050000244951.a.a ##7	ENSGT00390000018322.b	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b.f #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Marmotini	ANCESTRAL SPECIES	19	ENSGT00390000018322.b	ENSGT00950000182907.a.a.j	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557.o	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b.f #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Marmotini_b	ANCESTRAL SPECIES	57		ENSGT00390000018322.b	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557.o	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b.f #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Squirrel	MODERN SPECIES	148		ENSSTOG00000006079	ENSSTOG00000006052	BMAL2 (ENSSTOG00000001344)	STK38L (ENSSTOG00000001333)	ENSSTOG00000008391	TM7SF3 (ENSSTOG00000020883)	FGFR1OP2 (ENSSTOG00000008628) #9	ENSSTOG00000025972 #10	ITPR2 (ENSSTOG00000015423) #11	SSPN (ENSSTOG00000021227) #12	ENSSTOG00000021007 #13	RASSF8 (ENSSTOG00000022027) #14	LMNTD1 (ENSSTOG00000005098)	ENSSTOG00000026226	KRAS (ENSSTOG00000009530) #22	ETFRF1 (ENSSTOG00000024945) #23	DNAI7 (ENSSTOG00000009509) #24	IRAG2 (ENSSTOG00000026727) #25	ENSSTOG00000004938 #26	SOX5 (ENSSTOG00000000100) #30	ETNK1 (ENSSTOG00000008379) #31	C2CD5 (ENSSTOG00000004906) #32	ST8SIA1 (ENSSTOG00000009654)	ENSSTOG00000022477 #33	CMAS (ENSSTOG00000010303)	ABCC9 (ENSSTOG00000001507)	KCNJ8 (ENSSTOG00000001502)	ENSSTOG00000022058	GYS2 (ENSSTOG00000006383)	SPX (ENSSTOG00000006364)
Arctic ground squirrel	MODERN SPECIES	100	ENSUPAG00010015232	SMCO2 (ENSUPAG00010015239)	BMAL2 (ENSUPAG00010015267)	STK38L (ENSUPAG00010015362)	ENSUPAG00010015410	ENSUPAG00010015431	TM7SF3 (ENSUPAG00010015455)	FGFR1OP2 (ENSUPAG00010015479) #9	ENSUPAG00010015508	INTS13 (ENSUPAG00010015517) #10	ITPR2 (ENSUPAG00010015598) #11	SSPN (ENSUPAG00010015841) #12	BHLHE41 (ENSUPAG00010015854) #13	RASSF8 (ENSUPAG00010015858) #14	ENSUPAG00010015875	KRAS (ENSUPAG00010015896) #22	ETFRF1 (ENSUPAG00010015915) #23	DNAI7 (ENSUPAG00010015919) #24	IRAG2 (ENSUPAG00010016042) #25	BCAT1 (ENSUPAG00010016309) #26	SOX5 (ENSUPAG00010016337) #30	ETNK1 (ENSUPAG00010016592) #31	ENSUPAG00010016617	C2CD5 (ENSUPAG00010016638) #32	ST8SIA1 (ENSUPAG00010017820)	ENSUPAG00010017832 #33	CMAS (ENSUPAG00010017844)	ABCC9 (ENSUPAG00010017855)	KCNJ8 (ENSUPAG00010018390)
Alpin marmot	MODERN SPECIES	52						MED21 (ENSMMMG00000018499)	TM7SF3 (ENSMMMG00000018490)	ENSMMMG00000018484	FGFR1OP2 (ENSMMMG00000018478) #9	INTS13 (ENSMMMG00000018473) #10	ITPR2 (ENSMMMG00000018276) #11	SSPN (ENSMMMG00000018260) #12	ENSMMMG00000018244 #14	ENSMMMG00000018222	LMNTD1 (ENSMMMG00000018217)	KRAS (ENSMMMG00000018194) #22	ETFRF1 (ENSMMMG00000018182) #23	DNAI7 (ENSMMMG00000018140) #24	IRAG2 (ENSMMMG00000018125) #25	BCAT1 (ENSMMMG00000018101) #26	SOX5 (ENSMMMG00000018035) #30	ENSMMMG00000018020	ETNK1 (ENSMMMG00000017995) #31	C2CD5 (ENSMMMG00000017591) #32	ST8SIA1 (ENSMMMG00000017575)	ENSMMMG00000017562 #33	CMAS (ENSMMMG00000017554)	ABCC9 (ENSMMMG00000016950)	KCNJ8 (ENSMMMG00000016941)	ENSMMMG00000016940	ENSMMMG00000016937
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005016025	SMCO2 (ENSSVLG00005015897)	BMAL2 (ENSSVLG00005015014)	STK38L (ENSSVLG00005014875)	MED21 (ENSSVLG00005014838)	TM7SF3 (ENSSVLG00005014809)	ENSSVLG00005014788	FGFR1OP2 (ENSSVLG00005014699) #9	INTS13 (ENSSVLG00005014650) #10	ITPR2 (ENSSVLG00005014004) #11	SSPN (ENSSVLG00005013638) #12	BHLHE41 (ENSSVLG00005013568) #13	ENSSVLG00005013521	RASSF8 (ENSSVLG00005013368) #14	LMNTD1 (ENSSVLG00005013266)	KRAS (ENSSVLG00005013177) #22	ETFRF1 (ENSSVLG00005013055) #23	DNAI7 (ENSSVLG00005012568) #24	ENSSVLG00005012187 #25	BCAT1 (ENSSVLG00005012012) #26	SOX5 (ENSSVLG00005011483) #30	ENSSVLG00005011366	ETNK1 (ENSSVLG00005011233) #31	C2CD5 (ENSSVLG00005011062) #32	ST8SIA1 (ENSSVLG00005010944)	ENSSVLG00005010892 #33	CMAS (ENSSVLG00005010853)	ABCC9 (ENSSVLG00005022831)	KCNJ8 (ENSSVLG00005022746)	ENSSVLG00005022718	GYS2 (ENSSVLG00005022607)
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT01030000234599.a.a.b.l	ENSGT01030000234599.a.a.b.k.b.a	ENSGT00940000157534	ENSGT01030000234599.a.a.a.a.i	ENSGT01030000234599.a.a.a.a.j.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Naked mole-rat female	MODERN SPECIES	24	RBFOX2 (ENSHGLG00000046566)	ENSHGLG00000015154	ENSHGLG00000016022	ENSHGLG00000017237	ENSHGLG00000013417	ENSHGLG00000013061	ENSHGLG00000044032 #9	ENSHGLG00000041655	INTS13 (ENSHGLG00000010176) #10	ITPR2 (ENSHGLG00000018135) #11	SSPN (ENSHGLG00000041411) #12	BHLHE41 (ENSHGLG00000036794) #13	RASSF8 (ENSHGLG00000036200) #14	ENSHGLG00000034920	LMNTD1 (ENSHGLG00000005502)	KRAS (ENSHGLG00000008775) #22	ENSHGLG00000042649 #23	DNAI7 (ENSHGLG00000017827) #24	LRMP (ENSHGLG00000017644) #25	ENSHGLG00000044797 #26	SOX5 (ENSHGLG00000016643) #30	ENSHGLG00000039682	ENSHGLG00000040973	ETNK1 (ENSHGLG00000011566) #31	ENSHGLG00000034168	C2CD5 (ENSHGLG00000016366) #32	ST8SIA1 (ENSHGLG00000009621)	ENSHGLG00000010665 #33	CMAS (ENSHGLG00000006107)	ABCC9 (ENSHGLG00000014958)	KCNJ8 (ENSHGLG00000015650)
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000155632	ENSGT01030000234599.a.a.b.l	ENSGT01030000234599.a.a.b.k.b.a	ENSGT00940000157534	ENSGT01030000234599.a.a.a.a.i	ENSGT01030000234599.a.a.a.a.j.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Guinea pig	MODERN SPECIES	28	ENSCPOG00000038184	ENSCPOG00000040055	ENSCPOG00000000348	RBFOX2 (ENSCPOG00000022180)	ENSCPOG00000024603	ENSCPOG00000037222	MED21 (ENSCPOG00000015007)	TM7SF3 (ENSCPOG00000015004)	FGFR1OP2 (ENSCPOG00000030323) #9	INTS13 (ENSCPOG00000014999) #10	ENSCPOG00000021778	ITPR2 (ENSCPOG00000012462) #11	SSPN (ENSCPOG00000033259) #12	ENSCPOG00000025122 #13	RASSF8 (ENSCPOG00000033532) #14	KRAS (ENSCPOG00000030290) #22	ETFRF1 (ENSCPOG00000010713) #23	DNAI7 (ENSCPOG00000005699) #24	IRAG2 (ENSCPOG00000005690) #25	BCAT1 (ENSCPOG00000003203) #26	SOX5 (ENSCPOG00000015686) #30	ETNK1 (ENSCPOG00000007574) #31	C2CD5 (ENSCPOG00000002611) #32	ST8SIA1 (ENSCPOG00000037768)	ENSCPOG00000027285 #33	CMAS (ENSCPOG00000000988)	ABCC9 (ENSCPOG00000011536)	KCNJ8 (ENSCPOG00000011535)	LDHB (ENSCPOG00000034968)	GYS2 (ENSCPOG00000014642)	SPX (ENSCPOG00000014641)
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00530000064086	ENSGT00940000155632	ENSGT01030000234599.a.a.b.l	ENSGT01030000234599.a.a.b.k.a	ENSGT01030000234599.a.a.b.k.b.a	ENSGT00940000157534	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Degu	MODERN SPECIES	105	ENSODEG00000011201	MYH9 (ENSODEG00000011598)	ENSODEG00000019846	RBFOX2 (ENSODEG00000009937)	ENSODEG00000010765	TM7SF3 (ENSODEG00000010223)	FGFR1OP2 (ENSODEG00000010035) #9	INTS13 (ENSODEG00000010618) #10	ENSODEG00000011680	ENSODEG00000010321 #11	ENSODEG00000010077 #11	SSPN (ENSODEG00000009793) #12	BHLHE41 (ENSODEG00000013113) #13	RASSF8 (ENSODEG00000010575) #14	LMNTD1 (ENSODEG00000009925)	KRAS (ENSODEG00000010412) #22	DNAI7 (ENSODEG00000009672) #24	IRAG2 (ENSODEG00000010644) #25	BCAT1 (ENSODEG00000009501) #26	ENSODEG00000010044	SOX5 (ENSODEG00000011773) #30	ETNK1 (ENSODEG00000011182) #31	ENSODEG00000010526	C2CD5 (ENSODEG00000010826) #32	ST8SIA1 (ENSODEG00000011649)	ENSODEG00000010288 #33	ENSODEG00000019754	ABCC9 (ENSODEG00000011228)	KCNJ8 (ENSODEG00000011130)	ENSODEG00000010887	GYS2 (ENSODEG00000012769)
Long-tailed chinchilla	MODERN SPECIES	120	ENSCLAG00000015965	ENSCLAG00000015836	ENSCLAG00000014514	ENSCLAG00000015996	ENSCLAG00000016144	RBFOX2 (ENSCLAG00000017106)	MED21 (ENSCLAG00000016595)	TM7SF3 (ENSCLAG00000017039)	FGFR1OP2 (ENSCLAG00000016939) #9	INTS13 (ENSCLAG00000015765) #10	ENSCLAG00000016175	ITPR2 (ENSCLAG00000017155) #11	SSPN (ENSCLAG00000015681) #12	ENSCLAG00000015603 #13	RASSF8 (ENSCLAG00000015615) #14	KRAS (ENSCLAG00000016519) #22	ETFRF1 (ENSCLAG00000016238) #23	DNAI7 (ENSCLAG00000017034) #24	IRAG2 (ENSCLAG00000015233) #25	BCAT1 (ENSCLAG00000016654) #26	SOX5 (ENSCLAG00000014641) #30	ETNK1 (ENSCLAG00000015907) #31	C2CD5 (ENSCLAG00000016952) #32	ST8SIA1 (ENSCLAG00000016736)	ENSCLAG00000015890 #33	CMAS (ENSCLAG00000016228)	ABCC9 (ENSCLAG00000017154)	KCNJ8 (ENSCLAG00000016808)	LDHB (ENSCLAG00000016258)	GYS2 (ENSCLAG00000016640)	SPX (ENSCLAG00000015491)
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b
Kangaroo rat	DUPLICATION
Kangaroo rat	MODERN SPECIES	400																ENSDORG00000011469 #22	Etfrf1 (ENSDORG00000029682) #23	Sox5 (ENSDORG00000003684) #30	Etnk1 (ENSDORG00000010614) #31	C2cd5 (ENSDORG00000027650) #32	St8sia1 (ENSDORG00000004852)	Cmas (ENSDORG00000015219)	Abcc9 (ENSDORG00000026375)	Ldhb (ENSDORG00000026550)	Gys2 (ENSDORG00000027352)	ENSDORG00000026804	Golt1b (ENSDORG00000028593) #37	Recql (ENSDORG00000015884) #36	Pyroxd1 (ENSDORG00000027675) #35	ENSDORG00000025968	ENSDORG00000030131
Kangaroo rat	MODERN SPECIES	464																ENSDORG00000028993 #22	Fstl5 (ENSDORG00000008961)
Myomorpha	ANCESTRAL SPECIES	15	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b
Muroidea	ANCESTRAL SPECIES	24	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00950000182825.B	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747.l #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00950000182825.B	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Cricetinae	ANCESTRAL SPECIES	32	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747.l #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	397																ENSCGRG00001012681 #22
Chinese hamster chok1gshd	MODERN SPECIES	166																ENSCGRG00001012931 #22
Chinese hamster chok1gshd	MODERN SPECIES	386																ENSCGRG00001013100 #22
Chinese hamster chok1gshd	MODERN SPECIES	210																ENSCGRG00001013183 #22
Chinese hamster chok1gshd	MODERN SPECIES	225	Ppfibp1 (ENSCGRG00001020798) ##7	1700034J05Rik (ENSCGRG00001000357)	Smco2 (ENSCGRG00001000723)	Arntl2 (ENSCGRG00001003351)	Stk38l (ENSCGRG00001006809)	Med21 (ENSCGRG00001016121)	Tm7sf3 (ENSCGRG00001016691)	Fgfr1op2 (ENSCGRG00001017121) #9	Ints13 (ENSCGRG00001017512) #10	Itpr2 (ENSCGRG00001022595) #11	Sspn (ENSCGRG00001023564) #12	Bhlhe41 (ENSCGRG00001000097) #13	Rassf8 (ENSCGRG00001000661) #14	ENSCGRG00001001500	Lmntd1 (ENSCGRG00001004513)	ENSCGRG00001006529 #22	ENSCGRG00001007087 #23	Casc1 (ENSCGRG00001009857) #24	Irag2 (ENSCGRG00001010745) #25	Bcat1 (ENSCGRG00001011881) #26	Sox5 (ENSCGRG00001014221) #30	Etnk1 (ENSCGRG00001015598) #31	C2cd5 (ENSCGRG00001021395) #32	St8sia1 (ENSCGRG00001000619)	Sult6b2 (ENSCGRG00001001663) #33	Cmas (ENSCGRG00001020466)	Abcc9 (ENSCGRG00001000558)	Kcnj8 (ENSCGRG00001010695)	Ldhb (ENSCGRG00001011147)	Gys2 (ENSCGRG00001012743)	Spx (ENSCGRG00001014523)
Golden Hamster	MODERN SPECIES	653	Pthlh (ENSMAUG00000016105)	ENSMAUG00000020104 ##7	ENSMAUG00000012620 ##7	Smco2 (ENSMAUG00000011476)	Arntl2 (ENSMAUG00000015279)	Stk38l (ENSMAUG00000002721)	ENSMAUG00000019929	Tm7sf3 (ENSMAUG00000014859)	Fgfr1op2 (ENSMAUG00000011732) #9	Ints13 (ENSMAUG00000002411) #10	ENSMAUG00000018663	Itpr2 (ENSMAUG00000012727) #11	ENSMAUG00000015512 #13	ENSMAUG00000010609 #14	ENSMAUG00000020897	Kras (ENSMAUG00000017232) #22	Etfrf1 (ENSMAUG00000016742) #23	Casc1 (ENSMAUG00000002903) #24	Irag2 (ENSMAUG00000019896) #25	Bcat1 (ENSMAUG00000011499) #26	Sox5 (ENSMAUG00000010173) #30	Etnk1 (ENSMAUG00000002984) #31	C2cd5 (ENSMAUG00000012466) #32	St8sia1 (ENSMAUG00000010851)	Sult6b2 (ENSMAUG00000015314) #33	Cmas (ENSMAUG00000020759)	Abcc9 (ENSMAUG00000022184)	Kcnj8 (ENSMAUG00000021678)	Ldhb (ENSMAUG00000008520)	Gys2 (ENSMAUG00000017572)	Spx (ENSMAUG00000007861)
Cricetidae_B	ANCESTRAL SPECIES	14	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747.l #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00950000182825.B	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Prairie vole	MODERN SPECIES	82	ENSMOCG00000014471	1700034J05Rik (ENSMOCG00000009791)	Smco2 (ENSMOCG00000012704)	Arntl2 (ENSMOCG00000019503)	Stk38l (ENSMOCG00000005424)	Med21 (ENSMOCG00000010866)	Tm7sf3 (ENSMOCG00000018940)	Fgfr1op2 (ENSMOCG00000009226) #9	Ints13 (ENSMOCG00000001190) #10	Itpr2 (ENSMOCG00000001208) #11	Sspn (ENSMOCG00000014308) #12	Bhlhe41 (ENSMOCG00000002571) #13	Rassf8 (ENSMOCG00000017540) #14	ENSMOCG00000016727	Lmntd1 (ENSMOCG00000008486)	Kras (ENSMOCG00000011313) #22	Etfrf1 (ENSMOCG00000000926) #23	Casc1 (ENSMOCG00000010336) #24	Irag2 (ENSMOCG00000001897) #25	Bcat1 (ENSMOCG00000018342) #26	Sox5 (ENSMOCG00000003982) #30	Etnk1 (ENSMOCG00000015568) #31	C2cd5 (ENSMOCG00000005597) #32	St8sia1 (ENSMOCG00000020160)	Sult6b2 (ENSMOCG00000001915) #33	Cmas (ENSMOCG00000021041)	Abcc9 (ENSMOCG00000018016)	Kcnj8 (ENSMOCG00000000081)	Ldhb (ENSMOCG00000001380)	ENSMOCG00000016666	Gys2 (ENSMOCG00000000198)
Northern American deer mouse	MODERN SPECIES	16	1700034J05Rik (ENSPEMG00000027073)	Smco2 (ENSPEMG00000012053)	Arntl2 (ENSPEMG00000020386)	Stk38l (ENSPEMG00000021788)	Med21 (ENSPEMG00000008474)	Tm7sf3 (ENSPEMG00000023529)	ENSPEMG00000025563	Fgfr1op2 (ENSPEMG00000020963) #9	Ints13 (ENSPEMG00000005292) #10	Itpr2 (ENSPEMG00000015317) #11	Sspn (ENSPEMG00000028151) #12	Bhlhe41 (ENSPEMG00000008096) #13	Rassf8 (ENSPEMG00000007472) #14	ENSPEMG00000028173	Lmntd1 (ENSPEMG00000014844)	Kras (ENSPEMG00000025855) #22	Etfrf1 (ENSPEMG00000023976) #23	Casc1 (ENSPEMG00000008126) #24	Irag2 (ENSPEMG00000023409) #25	Bcat1 (ENSPEMG00000023771) #26	Sox5 (ENSPEMG00000002152) #30	Etnk1 (ENSPEMG00000022752) #31	C2cd5 (ENSPEMG00000007233) #32	ENSPEMG00000026545	ENSPEMG00000001341	St8sia1 (ENSPEMG00000027967)	Sult6b2 (ENSPEMG00000012937) #33	Cmas (ENSPEMG00000015063)	Abcc9 (ENSPEMG00000021085)	Kcnj8 (ENSPEMG00000028025)	ENSPEMG00000016521
Murinae	ANCESTRAL SPECIES	4	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00950000182825.B	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Mus	ANCESTRAL SPECIES	12	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00950000182825.B	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Mus_A	ANCESTRAL SPECIES	7	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00950000182825.B	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Ryukyu mouse	MODERN SPECIES	15	1700034J05Rik (MGP_CAROLIEiJ_G0029062)	Ppfibp1 (MGP_CAROLIEiJ_G0029061) ##7	Smco2 (MGP_CAROLIEiJ_G0029060)	Arntl2 (MGP_CAROLIEiJ_G0029059)	Stk38l (MGP_CAROLIEiJ_G0029058)	Med21 (MGP_CAROLIEiJ_G0029057)	Tm7sf3 (MGP_CAROLIEiJ_G0029056)	Fgfr1op2 (MGP_CAROLIEiJ_G0029055) #9	Ints13 (MGP_CAROLIEiJ_G0029054) #10	Itpr2 (MGP_CAROLIEiJ_G0029053) #11	Sspn (MGP_CAROLIEiJ_G0029052) #12	Bhlhe41 (MGP_CAROLIEiJ_G0029051) #13	Rassf8 (MGP_CAROLIEiJ_G0029050) #14	MGP_CAROLIEiJ_G0029049	Lmntd1 (MGP_CAROLIEiJ_G0029048)	Kras (MGP_CAROLIEiJ_G0029047) #22	Etfrf1 (MGP_CAROLIEiJ_G0029046) #23	Casc1 (MGP_CAROLIEiJ_G0029045) #24	Irag2 (MGP_CAROLIEiJ_G0029044) #25	Bcat1 (MGP_CAROLIEiJ_G0029043) #26	Sox5 (MGP_CAROLIEiJ_G0029042) #30	Etnk1 (MGP_CAROLIEiJ_G0029041) #31	C2cd5 (MGP_CAROLIEiJ_G0029040) #32	St8sia1 (MGP_CAROLIEiJ_G0029039)	Sult6b2 (MGP_CAROLIEiJ_G0029038) #33	Cmas (MGP_CAROLIEiJ_G0029037)	Abcc9 (MGP_CAROLIEiJ_G0029036)	Kcnj8 (MGP_CAROLIEiJ_G0029035)	Ldhb (MGP_CAROLIEiJ_G0029034)	Gys2 (MGP_CAROLIEiJ_G0029033)	Spx (MGP_CAROLIEiJ_G0029032)
Mus_B	ANCESTRAL SPECIES	15	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Mus_C	ANCESTRAL SPECIES	29	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
spretus	MODERN SPECIES	15	1700034J05Rik (MGP_SPRETEiJ_G0030117)	Ppfibp1 (MGP_SPRETEiJ_G0030116) ##7	MGP_SPRETEiJ_G0030115	MGP_SPRETEiJ_G0030114	Stk38l (MGP_SPRETEiJ_G0030113)	Med21 (MGP_SPRETEiJ_G0030112)	Tm7sf3 (MGP_SPRETEiJ_G0030111)	Fgfr1op2 (MGP_SPRETEiJ_G0030110) #9	Ints13 (MGP_SPRETEiJ_G0030109) #10	Itpr2 (MGP_SPRETEiJ_G0030108) #11	Sspn (MGP_SPRETEiJ_G0030107) #12	Bhlhe41 (MGP_SPRETEiJ_G0030106) #13	Rassf8 (MGP_SPRETEiJ_G0030105) #14	MGP_SPRETEiJ_G0030104	Lmntd1 (MGP_SPRETEiJ_G0030103)	Kras (MGP_SPRETEiJ_G0030102) #22	Etfrf1 (MGP_SPRETEiJ_G0030101) #23	Casc1 (MGP_SPRETEiJ_G0030100) #24	Irag2 (MGP_SPRETEiJ_G0030099) #25	Bcat1 (MGP_SPRETEiJ_G0030098) #26	Sox5 (MGP_SPRETEiJ_G0030097) #30	Etnk1 (MGP_SPRETEiJ_G0030096) #31	C2cd5 (MGP_SPRETEiJ_G0030095) #32	St8sia1 (MGP_SPRETEiJ_G0030094)	Sult6b2 (MGP_SPRETEiJ_G0030093) #33	Cmas (MGP_SPRETEiJ_G0030092)	Abcc9 (MGP_SPRETEiJ_G0030091)	Kcnj8 (MGP_SPRETEiJ_G0030090)	Ldhb (MGP_SPRETEiJ_G0030089)	Gys2 (MGP_SPRETEiJ_G0030088)	Spx (MGP_SPRETEiJ_G0030087)
Mouse	MODERN SPECIES	15	1700034J05Rik (ENSMUSG00000040163)	Ppfibp1 (ENSMUSG00000016487) ##7	Smco2 (ENSMUSG00000030292)	Arntl2 (ENSMUSG00000040187)	Stk38l (ENSMUSG00000001630)	Med21 (ENSMUSG00000030291)	Tm7sf3 (ENSMUSG00000040234)	Fgfr1op2 (ENSMUSG00000040242) #9	Ints13 (ENSMUSG00000040250) #10	Itpr2 (ENSMUSG00000030287) #11	Sspn (ENSMUSG00000030255) #12	Bhlhe41 (ENSMUSG00000030256) #13	Rassf8 (ENSMUSG00000030259) #14	Tuba3b (ENSMUSG00000067338)	Lmntd1 (ENSMUSG00000054966)	Kras (ENSMUSG00000030265) #22	Etfrf1 (ENSMUSG00000040370) #23	Casc1 (ENSMUSG00000043541) #24	Irag2 (ENSMUSG00000030263) #25	Bcat1 (ENSMUSG00000030268) #26	Sox5 (ENSMUSG00000041540) #30	Etnk1 (ENSMUSG00000030275) #31	C2cd5 (ENSMUSG00000030279) #32	St8sia1 (ENSMUSG00000030283)	Sult6b2 (ENSMUSG00000048473) #33	Cmas (ENSMUSG00000030282)	Abcc9 (ENSMUSG00000030249)	Kcnj8 (ENSMUSG00000030247)	Ldhb (ENSMUSG00000030246)	Gys2 (ENSMUSG00000030244)	Spx (ENSMUSG00000071112)
Shrew mouse	MODERN SPECIES	11	1700034J05Rik (MGP_PahariEiJ_G0022823)	Ppfibp1 (MGP_PahariEiJ_G0022822) ##7	Smco2 (MGP_PahariEiJ_G0022821)	Stk38l (MGP_PahariEiJ_G0022820)	Med21 (MGP_PahariEiJ_G0022819)	Tm7sf3 (MGP_PahariEiJ_G0022818)	MGP_PahariEiJ_G0022817 #9	Ints13 (MGP_PahariEiJ_G0022816) #10	Itpr2 (MGP_PahariEiJ_G0022815) #11	Sspn (MGP_PahariEiJ_G0022814) #12	Bhlhe41 (MGP_PahariEiJ_G0022813) #13	Rassf8 (MGP_PahariEiJ_G0022812) #14	MGP_PahariEiJ_G0022811	Tuba3b (MGP_PahariEiJ_G0022810)	Lmntd1 (MGP_PahariEiJ_G0022809)	Kras (MGP_PahariEiJ_G0022808) #22	Etfrf1 (MGP_PahariEiJ_G0022807) #23	Casc1 (MGP_PahariEiJ_G0022806) #24	MGP_PahariEiJ_G0022805	Bcat1 (MGP_PahariEiJ_G0022804) #26	Sox5 (MGP_PahariEiJ_G0022803) #30	Etnk1 (MGP_PahariEiJ_G0022802) #31	C2cd5 (MGP_PahariEiJ_G0022801) #32	St8sia1 (MGP_PahariEiJ_G0022800)	Sult6b2 (MGP_PahariEiJ_G0022799) #33	Cmas (MGP_PahariEiJ_G0022798)	Abcc9 (MGP_PahariEiJ_G0022797)	Kcnj8 (MGP_PahariEiJ_G0022796)	Ldhb (MGP_PahariEiJ_G0022795)	Gys2 (MGP_PahariEiJ_G0022794)	Spx (MGP_PahariEiJ_G0022793)
Upper Galilee mountains blind mole rat	MODERN SPECIES	953																Kras (ENSNGAG00000000727) #22	Etfrf1 (ENSNGAG00000007031) #23	Casc1 (ENSNGAG00000011257) #24	Irag2 (ENSNGAG00000000802) #25	Bcat1 (ENSNGAG00000000419) #26	Sox5 (ENSNGAG00000000919) #30	ENSNGAG00000014146	Etnk1 (ENSNGAG00000015742) #31	C2cd5 (ENSNGAG00000015602) #32	St8sia1 (ENSNGAG00000018969)	Sult6b2 (ENSNGAG00000009596) #33	Cmas (ENSNGAG00000013819)	ENSNGAG00000016209
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	111	Arhgdib (ENSJJAG00000015854)	Erp27 (ENSJJAG00000015603)	Mgp (ENSJJAG00000015199)	Art4 (ENSJJAG00000015150)	Smco3 (ENSJJAG00000013764)	ENSJJAG00000014822	Tm7sf3 (ENSJJAG00000014434)	ENSJJAG00000014242 #9	Ints13 (ENSJJAG00000013125) #10	Itpr2 (ENSJJAG00000000125) #11	Sspn (ENSJJAG00000018160) #12	ENSJJAG00000017871 #13	ENSJJAG00000017775 #14	ENSJJAG00000013495	Tuba3b (ENSJJAG00000017028)	Kras (ENSJJAG00000016513) #22	Etfrf1 (ENSJJAG00000015972) #23	Casc1 (ENSJJAG00000013952) #24	Irag2 (ENSJJAG00000012617) #25	Bcat1 (ENSJJAG00000012001) #26	Sox5 (ENSJJAG00000011054) #30	Etnk1 (ENSJJAG00000007821) #31	C2cd5 (ENSJJAG00000022968) #32	Ldhb (ENSJJAG00000021607)	Kcnj8 (ENSJJAG00000021363)	ENSJJAG00000020871	Cmas (ENSJJAG00000020278)	Sult6b2 (ENSJJAG00000020085) #33	St8sia1 (ENSJJAG00000019797)	Gys2 (ENSJJAG00000019252)	ENSJJAG00000019012
Lesser Egyptian jerboa	MODERN SPECIES	136	Rprd1a (ENSJJAG00000012409)	2700062C07Rik (ENSJJAG00000012084)	Galnt1 (ENSJJAG00000011958)	ENSJJAG00000011728	Zfp24 (ENSJJAG00000011478)	Zfp397 (ENSJJAG00000011030)	Mapre2 (ENSJJAG00000020330)	ENSJJAG00000019900	ENSJJAG00000019718	ENSJJAG00000019507	Nol4 (ENSJJAG00000015502)	Asxl3 (ENSJJAG00000013863)	ENSJJAG00000013354	Klhl14 (ENSJJAG00000012993)	ENSJJAG00000012089	ENSJJAG00000012709 #22	Garem1 (ENSJJAG00000012481)	ENSJJAG00000012075	Mep1b (ENSJJAG00000011410)
Lagomorpha	ANCESTRAL SPECIES	27	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Rabbit	MODERN SPECIES	19	PPFIBP1 (ENSOCUG00000016191) ##7	ENSOCUG00000022613	ENSOCUG00000016178	BMAL2 (ENSOCUG00000007097)	STK38L (ENSOCUG00000022781)	MED21 (ENSOCUG00000034587)	TM7SF3 (ENSOCUG00000008344)	FGFR1OP2 (ENSOCUG00000008342) #9	ENSOCUG00000038072	INTS13 (ENSOCUG00000008328) #10	ITPR2 (ENSOCUG00000010741) #11	SSPN (ENSOCUG00000010739) #12	ENSOCUG00000032502 #13	RASSF8 (ENSOCUG00000010737) #14	LMNTD1 (ENSOCUG00000006725)	KRAS (ENSOCUG00000012106) #22	ETFRF1 (ENSOCUG00000012099) #23	DNAI7 (ENSOCUG00000015984) #24	IRAG2 (ENSOCUG00000015956) #25	ENSOCUG00000038101	BCAT1 (ENSOCUG00000003963) #26	SOX5 (ENSOCUG00000011479) #30	ENSOCUG00000027097	ETNK1 (ENSOCUG00000014088) #31	C2CD5 (ENSOCUG00000017163) #32	ST8SIA1 (ENSOCUG00000013134)	CMAS (ENSOCUG00000013129)	ENSOCUG00000022066 #33	ABCC9 (ENSOCUG00000008023)	KCNJ8 (ENSOCUG00000008019)	LDHB (ENSOCUG00000022015)
Pika	MODERN SPECIES	8193																KRAS (ENSOPRG00000012068) #22
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000160423	ENSGT01050000244951.a.a ##7	ENSGT00940000169031	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Suina	ANCESTRAL SPECIES	4	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Chacoan peccary	MODERN SPECIES	901	IL22 (ENSCWAG00000020919)	MDM1 (ENSCWAG00000020798)	RAP1B (ENSCWAG00000020716)	NUP107 (ENSCWAG00000020624)	SLC35E3 (ENSCWAG00000020603)	STK38L (ENSCWAG00000020594)	MED21 (ENSCWAG00000020588)	TM7SF3 (ENSCWAG00000020561)	FGFR1OP2 (ENSCWAG00000020531) #9	INTS13 (ENSCWAG00000020514) #10	ITPR2 (ENSCWAG00000020490) #11	SSPN (ENSCWAG00000020468) #12	BHLHE41 (ENSCWAG00000020451) #13	RASSF8 (ENSCWAG00000020442) #14	LMNTD1 (ENSCWAG00000020426)	KRAS (ENSCWAG00000020412) #22	ETFRF1 (ENSCWAG00000020390) #23	DNAI7 (ENSCWAG00000020143) #24	ENSCWAG00000019994 #25	BCAT1 (ENSCWAG00000019827) #26	SOX5 (ENSCWAG00000019638) #30	ETNK1 (ENSCWAG00000019545) #31	C2CD5 (ENSCWAG00000019218) #32	ST8SIA1 (ENSCWAG00000019183)	ENSCWAG00000019149 #33	CMAS (ENSCWAG00000019111)	ABCC9 (ENSCWAG00000018465)	KCNJ8 (ENSCWAG00000018411)	ENSCWAG00000018403	ENSCWAG00000018379	GYS2 (ENSCWAG00000018301)
Pig	MODERN SPECIES	13	PPFIBP1 (ENSSSCG00000000549) ##7	SMCO2 (ENSSSCG00000000550)	BMAL2 (ENSSSCG00000000551)	STK38L (ENSSSCG00000022288)	ENSSSCG00000042702	MED21 (ENSSSCG00000041972)	TM7SF3 (ENSSSCG00000000553)	ENSSSCG00000036398	FGFR1OP2 (ENSSSCG00000000554) #9	INTS13 (ENSSSCG00000030443) #10	ITPR2 (ENSSSCG00000000555) #11	SSPN (ENSSSCG00000025531) #12	BHLHE41 (ENSSSCG00000028552) #13	RASSF8 (ENSSSCG00000000559) #14	LMNTD1 (ENSSSCG00000027144)	KRAS (ENSSSCG00000026969) #22	ETFRF1 (ENSSSCG00000033843) #23	DNAI7 (ENSSSCG00000040550) #24	ENSSSCG00000000563 #25	BCAT1 (ENSSSCG00000029163) #26	SOX5 (ENSSSCG00000000567) #30	ENSSSCG00000051791	ETNK1 (ENSSSCG00000039397) #31	C2CD5 (ENSSSCG00000000570) #32	ENSSSCG00000043201	ST8SIA1 (ENSSSCG00000031329)	ENSSSCG00000026594 #33	CMAS (ENSSSCG00000034733)	ABCC9 (ENSSSCG00000000571)	KCNJ8 (ENSSSCG00000000573)	ENSSSCG00000038537
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Camelidae	ANCESTRAL SPECIES	17	ENSGT00390000005178	ENSGT00390000018322	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00940000173162
Alpaca	MODERN SPECIES	720																KRAS (ENSVPAG00000000319) #22	ETFRF1 (ENSVPAG00000000318) #23	DNAI7 (ENSVPAG00000000316) #24	IRAG2 (ENSVPAG00000000313) #25	BCAT1 (ENSVPAG00000000310) #26	SOX5 (ENSVPAG00000000308) #30	ETNK1 (ENSVPAG00000000307) #31
Arabian camel	MODERN SPECIES	27	ENSCDRG00005012014	PPFIBP1 (ENSCDRG00005011235) ##7	ENSCDRG00005011128	BMAL2 (ENSCDRG00005010535)	STK38L (ENSCDRG00005010444)	MED21 (ENSCDRG00005010403)	TM7SF3 (ENSCDRG00005010304)	FGFR1OP2 (ENSCDRG00005010190) #9	INTS13 (ENSCDRG00005010111) #10	ITPR2 (ENSCDRG00005009262) #11	ENSCDRG00005009209 #12	ENSCDRG00005009191	BHLHE41 (ENSCDRG00005009146) #13	RASSF8 (ENSCDRG00005009008) #14	LMNTD1 (ENSCDRG00005020127)	KRAS (ENSCDRG00005020107) #22	ETFRF1 (ENSCDRG00005020089) #23	DNAI7 (ENSCDRG00005020024) #24	ENSCDRG00005019915 #25	BCAT1 (ENSCDRG00005019573) #26	SOX5 (ENSCDRG00005019208) #30	ETNK1 (ENSCDRG00005019130) #31	C2CD5 (ENSCDRG00005018969) #32	ST8SIA1 (ENSCDRG00005018909)	ENSCDRG00005018878 #33	CMAS (ENSCDRG00005018843)	ABCC9 (ENSCDRG00005018701)	KCNJ8 (ENSCDRG00005018658)	ENSCDRG00005018635	GYS2 (ENSCDRG00005018625)	ENSCDRG00005018598
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Pecora	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Yarkand deer	MODERN SPECIES	14	SMCO2 (ENSCHYG00000009242)	BMAL2 (ENSCHYG00000009395)	STK38L (ENSCHYG00000009684)	MED21 (ENSCHYG00000009773)	TM7SF3 (ENSCHYG00000009826)	ENSCHYG00000010010	FGFR1OP2 (ENSCHYG00000010083) #9	INTS13 (ENSCHYG00000010278) #10	ENSCHYG00000010472	ITPR2 (ENSCHYG00000010667) #11	SSPN (ENSCHYG00000012092) #12	BHLHE41 (ENSCHYG00000012152) #13	RASSF8 (ENSCHYG00000012178) #14	LMNTD1 (ENSCHYG00000012241)	ENSCHYG00000012342	KRAS (ENSCHYG00000012381) #22	ENSCHYG00000012493	DNAI7 (ENSCHYG00000012592) #24	IRAG2 (ENSCHYG00000013072) #25	BCAT1 (ENSCHYG00000013194) #26	ENSCHYG00000013570	ENSCHYG00000013698	SOX5 (ENSCHYG00000013787) #30	ETNK1 (ENSCHYG00000014267) #31	C2CD5 (ENSCHYG00000014543) #32	ST8SIA1 (ENSCHYG00000015995)	ENSCHYG00000016113 #33	CMAS (ENSCHYG00000016199)	ABCC9 (ENSCHYG00000016336)	KCNJ8 (ENSCHYG00000017377)	ENSCHYG00000017410
Percora_a	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Bovidae	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Bovinae	ANCESTRAL SPECIES	10	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a.o #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a.m	ENSGT00390000018612.a.b	ENSGT00390000012501
Bos	ANCESTRAL SPECIES	2	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a.o #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a.m	ENSGT00390000018612.a.b	ENSGT00390000012501
Bos_b	ANCESTRAL SPECIES	22	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00530000063539.b.lb.a	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a.o #26	ENSGT00940000156122 #30	ENSGT00940000154152.d.b.h.a.b	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a.m	ENSGT00390000018612.a.b
Hybrid Bos Indicus	MODERN SPECIES	24	PPFIBP1 (ENSBIXG00005030080) ##7	SMCO2 (ENSBIXG00005029999)	BMAL2 (ENSBIXG00005029787)	STK38L (ENSBIXG00005029742)	MED21 (ENSBIXG00005029720)	TM7SF3 (ENSBIXG00005029713)	ENSBIXG00005029705	FGFR1OP2 (ENSBIXG00005029694) #9	INTS13 (ENSBIXG00005029676) #10	ITPR2 (ENSBIXG00005029654) #11	SSPN (ENSBIXG00005029617) #12	BHLHE41 (ENSBIXG00005029600) #13	RASSF8 (ENSBIXG00005029583) #14	ENSBIXG00005029563	ENSBIXG00005029548	KRAS (ENSBIXG00005029534) #22	ETFRF1 (ENSBIXG00005029501) #23	DNAI7 (ENSBIXG00005029450) #24	IRAG2 (ENSBIXG00005029377) #25	ENSBIXG00005029312 #26	ENSBIXG00005007855	SOX5 (ENSBIXG00005007922) #30	ETNK1 (ENSBIXG00005007986) #31	C2CD5 (ENSBIXG00005008163) #32	ST8SIA1 (ENSBIXG00005008238)	ENSBIXG00005008258 #33	CMAS (ENSBIXG00005008273)	ABCC9 (ENSBIXG00005005898)	KCNJ8 (ENSBIXG00005005900)	ENSBIXG00005000172	GYS2 (ENSBIXG00005008369)
Cow	MODERN SPECIES	24	PPFIBP1 (ENSBTAG00000004283) ##7	C5H12orf71 (ENSBTAG00000002775)	ARNTL2 (ENSBTAG00000011804)	STK38L (ENSBTAG00000011798)	MED21 (ENSBTAG00000005082)	TM7SF3 (ENSBTAG00000006985)	FGFR1OP2 (ENSBTAG00000004532) #9	ENSBTAG00000052661	INTS13 (ENSBTAG00000013515) #10	ITPR2 (ENSBTAG00000002313) #11	SSPN (ENSBTAG00000000393) #12	BHLHE41 (ENSBTAG00000030575) #13	RASSF8 (ENSBTAG00000021980) #14	LMNTD1 (ENSBTAG00000000749)	ENSBTAG00000055210	KRAS (ENSBTAG00000009778) #22	ETFRF1 (ENSBTAG00000026624) #23	DNAI7 (ENSBTAG00000002972) #24	IRAG2 (ENSBTAG00000019711) #25	BCAT1 (ENSBTAG00000013825) #26	SOX5 (ENSBTAG00000022360) #30	ENSBTAG00000004109	ETNK1 (ENSBTAG00000005833) #31	C2CD5 (ENSBTAG00000001673) #32	ST8SIA1 (ENSBTAG00000000593)	ENSBTAG00000026611 #33	CMAS (ENSBTAG00000010136)	ABCC9 (ENSBTAG00000019294)	KCNJ8 (ENSBTAG00000002551)	LDHB (ENSBTAG00000019603)	GYS2 (ENSBTAG00000013333)
Bos_a	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a.o #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a.m	ENSGT00390000018612.a.b
Domestic yak	MODERN SPECIES	24	ENSBGRG00000002107	MED21 (ENSBGRG00000002068)	TM7SF3 (ENSBGRG00000001991)	ENSBGRG00000001967	FGFR1OP2 (ENSBGRG00000001934) #9	INTS13 (ENSBGRG00000001890) #10	ENSBGRG00000001877	ENSBGRG00000001863	ENSBGRG00000001852	ENSBGRG00000001831	ITPR2 (ENSBGRG00000001728) #11	SSPN (ENSBGRG00000001691) #12	BHLHE41 (ENSBGRG00000001670) #13	RASSF8 (ENSBGRG00000001611) #14	LMNTD1 (ENSBGRG00000001546)	KRAS (ENSBGRG00000001524) #22	ENSBGRG00000001511	DNAI7 (ENSBGRG00000001323) #24	IRAG2 (ENSBGRG00000001276) #25	ENSBGRG00000001086 #26	SOX5 (ENSBGRG00000000530) #30	ENSBGRG00000000454	ETNK1 (ENSBGRG00000000417) #31	C2CD5 (ENSBGRG00000000306) #32	ENSBGRG00000003697	ENSBGRG00000003680	ENSBGRG00000003669	ST8SIA1 (ENSBGRG00000003643)	ENSBGRG00000003609 #33	CMAS (ENSBGRG00000003597)	ABCC9 (ENSBGRG00000003543)
Wild yak	MODERN SPECIES	1365																KRAS (ENSBMUG00000019982) #22	ETFRF1 (ENSBMUG00000020010) #23	DNAI7 (ENSBMUG00000020080) #24	IRAG2 (ENSBMUG00000020101) #25	ENSBMUG00000020163 #26
American bison	MODERN SPECIES	3284	C12orf71 (ENSBBBG00000001760)	ENSBBBG00000010290	SMCO2 (ENSBBBG00000010301)	BMAL2 (ENSBBBG00000010408)	STK38L (ENSBBBG00000010425)	MED21 (ENSBBBG00000010435)	TM7SF3 (ENSBBBG00000007642)	ENSBBBG00000001825	FGFR1OP2 (ENSBBBG00000010494) #9	INTS13 (ENSBBBG00000010504) #10	ITPR2 (ENSBBBG00000010536) #11	SSPN (ENSBBBG00000010548) #12	RASSF8 (ENSBBBG00000010565) #14	ENSBBBG00000010575	ENSBBBG00000010578	KRAS (ENSBBBG00000010586) #22	ENSBBBG00000001854	DNAI7 (ENSBBBG00000001867) #24	IRAG2 (ENSBBBG00000010696) #25	ENSBBBG00000010741 #26	SOX5 (ENSBBBG00000010795) #30	ETNK1 (ENSBBBG00000010821) #31	C2CD5 (ENSBBBG00000011064) #32	ENSBBBG00000011091	ST8SIA1 (ENSBBBG00000011097)	ENSBBBG00000011102 #33	CMAS (ENSBBBG00000011109)	ABCC9 (ENSBBBG00000002026)	KCNJ8 (ENSBBBG00000011200)	ENSBBBG00000011210	GYS2 (ENSBBBG00000007541)
Caprinae	ANCESTRAL SPECIES		ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a.k	ENSGT00390000018612.a.b	ENSGT00390000012501
Goat	MODERN SPECIES	24	ENSCHIG00000003027	SMCO2 (ENSCHIG00000023398)	BMAL2 (ENSCHIG00000019532)	STK38L (ENSCHIG00000015117)	MED21 (ENSCHIG00000017040)	TM7SF3 (ENSCHIG00000010359)	ENSCHIG00000001969	FGFR1OP2 (ENSCHIG00000020593) #9	INTS13 (ENSCHIG00000002599) #10	ITPR2 (ENSCHIG00000016600) #11	SSPN (ENSCHIG00000024484) #12	BHLHE41 (ENSCHIG00000024108) #13	RASSF8 (ENSCHIG00000024588) #14	LMNTD1 (ENSCHIG00000017319)	ENSCHIG00000011443	KRAS (ENSCHIG00000026575) #22	ETFRF1 (ENSCHIG00000023135) #23	DNAI7 (ENSCHIG00000016268) #24	IRAG2 (ENSCHIG00000006732) #25	ENSCHIG00000000786	BCAT1 (ENSCHIG00000025125) #26	SOX5 (ENSCHIG00000026249) #30	ENSCHIG00000003098	ETNK1 (ENSCHIG00000010576) #31	C2CD5 (ENSCHIG00000011005) #32	ENSCHIG00000010485	ST8SIA1 (ENSCHIG00000022129)	ENSCHIG00000015874 #33	CMAS (ENSCHIG00000003246)	ABCC9 (ENSCHIG00000026713)	KCNJ8 (ENSCHIG00000023544)
Rambouillet Sheep	MODERN SPECIES	19	ENSOARG00020002844	BMAL2 (ENSOARG00020002869)	STK38L (ENSOARG00020002895)	ENSOARG00020002907	TM7SF3 (ENSOARG00020002918)	FGFR1OP2 (ENSOARG00020002964) #9	ENSOARG00020002981	INTS13 (ENSOARG00020003013) #10	ITPR2 (ENSOARG00020003133) #11	SSPN (ENSOARG00020003422) #12	BHLHE41 (ENSOARG00020003455) #13	RASSF8 (ENSOARG00020003491) #14	ENSOARG00020003528	ENSOARG00020003559	ENSOARG00020003591	KRAS (ENSOARG00020003619) #22	ENSOARG00020003693	CASC1 (ENSOARG00020003767) #24	IRAG2 (ENSOARG00020004466) #25	BCAT1 (ENSOARG00020004542) #26	ENSOARG00020004905 #24	SOX5 (ENSOARG00020004965) #30	ETNK1 (ENSOARG00020005297) #31	C2CD5 (ENSOARG00020005387) #32	ST8SIA1 (ENSOARG00020006095)	ENSOARG00020006121 #33	CMAS (ENSOARG00020006141)	ABCC9 (ENSOARG00020006172)	ENSOARG00020006234	KCNJ8 (ENSOARG00020006255)	ENSOARG00020006271
Siberian musk deer	MODERN SPECIES	1250	PPFIBP1 (ENSMMSG00000023976) ##7	SMCO2 (ENSMMSG00000023956)	BMAL2 (ENSMMSG00000023936)	STK38L (ENSMMSG00000023918)	MED21 (ENSMMSG00000023910)	TM7SF3 (ENSMMSG00000023901)	ENSMMSG00000023896	FGFR1OP2 (ENSMMSG00000023887) #9	INTS13 (ENSMMSG00000023873) #10	ITPR2 (ENSMMSG00000023857) #11	SSPN (ENSMMSG00000023848) #12	BHLHE41 (ENSMMSG00000023843) #13	RASSF8 (ENSMMSG00000023837) #14	LMNTD1 (ENSMMSG00000023821)	ENSMMSG00000023815	KRAS (ENSMMSG00000023808) #22	ETFRF1 (ENSMMSG00000023803) #23	DNAI7 (ENSMMSG00000023707) #24	IRAG2 (ENSMMSG00000023682) #25	BCAT1 (ENSMMSG00000023666) #26	ENSMMSG00000023659	SOX5 (ENSMMSG00000023587) #30	ETNK1 (ENSMMSG00000023565) #31	C2CD5 (ENSMMSG00000023482) #32	ST8SIA1 (ENSMMSG00000023452)	ENSMMSG00000023442 #33	CMAS (ENSMMSG00000023434)	ABCC9 (ENSMMSG00000023417)	KCNJ8 (ENSMMSG00000023397)	ENSMMSG00000023385	GYS2 (ENSMMSG00000023372)
Cetacea	ANCESTRAL SPECIES	8	ENSGT00390000018322	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Blue whale	MODERN SPECIES	1	PPFIBP1 (ENSBMSG00010012137) ##7	SMCO2 (ENSBMSG00010012071)	BMAL2 (ENSBMSG00010011997)	STK38L (ENSBMSG00010011935)	MED21 (ENSBMSG00010011918)	TM7SF3 (ENSBMSG00010011888)	ENSBMSG00010011878	FGFR1OP2 (ENSBMSG00010011865) #9	INTS13 (ENSBMSG00010011853) #10	ENSBMSG00010011832	ITPR2 (ENSBMSG00010011579) #11	SSPN (ENSBMSG00010011518) #12	BHLHE41 (ENSBMSG00010011500) #13	RASSF8 (ENSBMSG00010011482) #14	ENSBMSG00010011471	KRAS (ENSBMSG00010011390) #22	ETFRF1 (ENSBMSG00010011375) #23	DNAI7 (ENSBMSG00010011160) #24	ENSBMSG00010011021 #25	BCAT1 (ENSBMSG00010008970) #26	SOX5 (ENSBMSG00010008849) #30	ENSBMSG00010008806	ETNK1 (ENSBMSG00010008756) #31	C2CD5 (ENSBMSG00010008399) #32	ST8SIA1 (ENSBMSG00010008290)	ENSBMSG00010008282	CMAS (ENSBMSG00010008269)	ABCC9 (ENSBMSG00010008195)	KCNJ8 (ENSBMSG00010008158)	ENSBMSG00010008151	GYS2 (ENSBMSG00010008130)
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00940000159157.h	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a
Sperm whale	MODERN SPECIES	17	MRPS35 (ENSPCTG00005008446)	REP15 (ENSPCTG00005008422)	PPFIBP1 (ENSPCTG00005007880) ##7	ENSPCTG00005007826	ARNTL2 (ENSPCTG00005007473)	STK38L (ENSPCTG00005019961)	MED21 (ENSPCTG00005019892)	TM7SF3 (ENSPCTG00005019861)	FGFR1OP2 (ENSPCTG00005019821) #9	INTS13 (ENSPCTG00005019777) #10	ITPR2 (ENSPCTG00005019648) #11	SSPN (ENSPCTG00005019595) #12	BHLHE41 (ENSPCTG00005019571) #13	RASSF8 (ENSPCTG00005019531) #14	LMNTD1 (ENSPCTG00005019496)	KRAS (ENSPCTG00005019457) #22	ETFRF1 (ENSPCTG00005019366) #23	CASC1 (ENSPCTG00005018863) #24	LRMP (ENSPCTG00005018385) #25	BCAT1 (ENSPCTG00005018026) #26	ENSPCTG00005017984	SOX5 (ENSPCTG00005017662) #30	ENSPCTG00005017626	ENSPCTG00005017598	ETNK1 (ENSPCTG00005017509) #31	ENSPCTG00005017475	C2CD5 (ENSPCTG00005017129) #32	ST8SIA1 (ENSPCTG00005017030)	CMAS (ENSPCTG00005016960)	ABCC9 (ENSPCTG00005015979)	KCNJ8 (ENSPCTG00005015904)
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000003443	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00940000159157.h	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a
Dolphin	MODERN SPECIES	3639															LMNTD1 (ENSTTRG00000012601)	KRAS (ENSTTRG00000012599) #22	ETFRF1 (ENSTTRG00000012597) #23	DNAI7 (ENSTTRG00000012589) #24	IRAG2 (ENSTTRG00000012581) #25
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT01040000241025	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00940000159157.h.a	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a
Vaquita	MODERN SPECIES	1	MRPS35 (ENSPSNG00000006622)	ENSPSNG00000006681 ##7	ENSPSNG00000006722	BMAL2 (ENSPSNG00000006769)	STK38L (ENSPSNG00000006831)	ENSPSNG00000006853	MED21 (ENSPSNG00000006883)	TM7SF3 (ENSPSNG00000006912)	FGFR1OP2 (ENSPSNG00000006954) #9	INTS13 (ENSPSNG00000007021) #10	ITPR2 (ENSPSNG00000007090) #11	SSPN (ENSPSNG00000007152) #12	BHLHE41 (ENSPSNG00000007190) #13	RASSF8 (ENSPSNG00000007228) #14	LMNTD1 (ENSPSNG00000007273)	KRAS (ENSPSNG00000007396) #22	ETFRF1 (ENSPSNG00000007433) #23	DNAI7 (ENSPSNG00000007486) #24	ENSPSNG00000007613 #25	BCAT1 (ENSPSNG00000008000) #26	SOX5 (ENSPSNG00000008185) #30	SH3BGRL2 (ENSPSNG00000008477)	ENSPSNG00000008505	ETNK1 (ENSPSNG00000008531) #31	ENSPSNG00000008610	C2CD5 (ENSPSNG00000008702) #32	ST8SIA1 (ENSPSNG00000008830)	ENSPSNG00000008876	ENSPSNG00000008896	CMAS (ENSPSNG00000008934)	ABCC9 (ENSPSNG00000009009)
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00390000003443	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT01040000241025	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00940000159157.h.a	ENSGT00640000091558.m.a	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a
Narwhal	MODERN SPECIES	313	MANSC4 (ENSMMNG00015018247)	MRPS35 (ENSMMNG00015018219)	PPFIBP1 (ENSMMNG00015017936) ##7	BMAL2 (ENSMMNG00015017460)	STK38L (ENSMMNG00015017291)	ENSMMNG00015017258	MED21 (ENSMMNG00015017243)	TM7SF3 (ENSMMNG00015017212)	FGFR1OP2 (ENSMMNG00015017164) #9	INTS13 (ENSMMNG00015017124) #10	ITPR2 (ENSMMNG00015016907) #11	SSPN (ENSMMNG00015016833) #12	BHLHE41 (ENSMMNG00015016813) #13	RASSF8 (ENSMMNG00015016768) #14	LMNTD1 (ENSMMNG00015016737)	KRAS (ENSMMNG00015016691) #22	ETFRF1 (ENSMMNG00015016654) #23	DNAI7 (ENSMMNG00015016543) #24	ENSMMNG00015016354 #25	BCAT1 (ENSMMNG00015016154) #26	SOX5 (ENSMMNG00015015755) #30	ENSMMNG00015015600	ENSMMNG00015015589	ETNK1 (ENSMMNG00015015575) #31	ENSMMNG00015015522	C2CD5 (ENSMMNG00015015426) #32	ST8SIA1 (ENSMMNG00015015355)	ENSMMNG00015015346	ENSMMNG00015015332 #33	CMAS (ENSMMNG00015015260)	ABCC9 (ENSMMNG00015015210)
Beluga whale	MODERN SPECIES	23	MRPS35 (ENSDLEG00000013439)	REP15 (ENSDLEG00000013421)	PPFIBP1 (ENSDLEG00000013239) ##7	BMAL2 (ENSDLEG00000013194)	STK38L (ENSDLEG00000013158)	ENSDLEG00000013144	MED21 (ENSDLEG00000013129)	TM7SF3 (ENSDLEG00000013098)	FGFR1OP2 (ENSDLEG00000013073) #9	INTS13 (ENSDLEG00000013042) #10	ITPR2 (ENSDLEG00000009955) #11	SSPN (ENSDLEG00000009487) #12	BHLHE41 (ENSDLEG00000009472) #13	RASSF8 (ENSDLEG00000009451) #14	LMNTD1 (ENSDLEG00000009367)	ENSDLEG00000009332 #22	ETFRF1 (ENSDLEG00000009294) #23	DNAI7 (ENSDLEG00000009247) #24	IRAG2 (ENSDLEG00000009161) #25	BCAT1 (ENSDLEG00000009143) #26	SOX5 (ENSDLEG00000008971) #30	ENSDLEG00000008908	ENSDLEG00000008898	ETNK1 (ENSDLEG00000008827) #31	C2CD5 (ENSDLEG00000008392) #32	ST8SIA1 (ENSDLEG00000008301)	ENSDLEG00000002913	CMAS (ENSDLEG00000002810)	ABCC9 (ENSDLEG00000002785)	KCNJ8 (ENSDLEG00000002776)	LDHB (ENSDLEG00000002771)
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Microbat	MODERN SPECIES	1015									ENSMLUG00000011560	ENSMLUG00000028725	ENSMLUG00000001815	ENSMLUG00000025090	RASSF8 (ENSMLUG00000008918) #14	ENSMLUG00000026072	LMNTD1 (ENSMLUG00000014251)	KRAS (ENSMLUG00000015948) #22	ETFRF1 (ENSMLUG00000028949) #23	DNAI7 (ENSMLUG00000012468) #24	IRAG2 (ENSMLUG00000012457) #25	ENSMLUG00000014372	BCAT1 (ENSMLUG00000012644) #26	ENSMLUG00000013055 #30	ENSMLUG00000008708	ETNK1 (ENSMLUG00000008294) #31	C2CD5 (ENSMLUG00000011534) #32	ST8SIA1 (ENSMLUG00000010849)	ENSMLUG00000026447	ENSMLUG00000023916 #33	ENSMLUG00000023021	ENSMLUG00000029786	ENSMLUG00000026352
Megabat	MODERN SPECIES	154																KRAS (ENSPVAG00000013668) #22	ETFRF1 (ENSPVAG00000013667) #23	DNAI7 (ENSPVAG00000013666) #24	IRAG2 (ENSPVAG00000013664) #25
Equus	ANCESTRAL SPECIES	16	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.g.b.a	ENSGT00390000018612.a.b	ENSGT00390000012501
Horse	DUPLICATION
Horse	DUPLICATION
Horse	MODERN SPECIES	392																ENSECAG00000059156 #22
Horse	MODERN SPECIES	30	RPL7 (ENSECAG00000009188)	C8orf89 (ENSECAG00000031944)	TERF1 (ENSECAG00000011894)	SBSPON (ENSECAG00000011744)	KCNB2 (ENSECAG00000016407)	TRPA1 (ENSECAG00000000203)	MSC (ENSECAG00000008333)	EYA1 (ENSECAG00000008636)	XKR9 (ENSECAG00000016759)	LACTB2 (ENSECAG00000017296)	NCOA2 (ENSECAG00000008394)	ENSECAG00000038016	PRDM14 (ENSECAG00000014777)	SLCO5A1 (ENSECAG00000016284)	SULF1 (ENSECAG00000016927)	ENSECAG00000030195 #22	C8orf34 (ENSECAG00000017939)	PREX2 (ENSECAG00000018479)	CPA6 (ENSECAG00000016047)	ARFGEF1 (ENSECAG00000016412)	CSPP1 (ENSECAG00000000909)	COPS5 (ENSECAG00000013916)	PPP1R42 (ENSECAG00000017878)	TCF24 (ENSECAG00000038988)	MCMDC2 (ENSECAG00000053323)	SGK3 (ENSECAG00000021200)	VCPIP1 (ENSECAG00000015559)	MYBL1 (ENSECAG00000015959)	VXN (ENSECAG00000000693)	ADHFE1 (ENSECAG00000000795)	RRS1 (ENSECAG00000004492)
Horse	MODERN SPECIES	27	PPFIBP1 (ENSECAG00000016652) ##7	SMCO2 (ENSECAG00000015434)	ARNTL2 (ENSECAG00000009925)	STK38L (ENSECAG00000023690)	MED21 (ENSECAG00000023171)	TM7SF3 (ENSECAG00000017496)	FGFR1OP2 (ENSECAG00000016890) #9	INTS13 (ENSECAG00000009087) #10	ITPR2 (ENSECAG00000008131) #11	SSPN (ENSECAG00000007530) #12	BHLHE41 (ENSECAG00000034955) #13	RASSF8 (ENSECAG00000022648) #14	ENSECAG00000044737	ENSECAG00000054536	LMNTD1 (ENSECAG00000021424)	KRAS (ENSECAG00000019522) #22	ETFRF1 (ENSECAG00000028314) #23	DNAI7 (ENSECAG00000015808) #24	IRAG2 (ENSECAG00000009290) #25	BCAT1 (ENSECAG00000020973) #26	SOX5 (ENSECAG00000013978) #30	ETNK1 (ENSECAG00000007231) #31	ENSECAG00000056222	C2CD5 (ENSECAG00000020692) #32	ENSECAG00000028949	ENSECAG00000027792	KCNJ8 (ENSECAG00000016950)	LDHB (ENSECAG00000011331)	GYS2 (ENSECAG00000014649)	GOLT1B (ENSECAG00000014013) #37	PYROXD1 (ENSECAG00000023975) #35
Donkey	DUPLICATION
Donkey	MODERN SPECIES	28	ENSEASG00005006657	PPFIBP1 (ENSEASG00005006651) ##7	SMCO2 (ENSEASG00005006659)	BMAL2 (ENSEASG00005006662)	STK38L (ENSEASG00005006667)	MED21 (ENSEASG00005006670)	TM7SF3 (ENSEASG00005006672)	FGFR1OP2 (ENSEASG00005006675) #9	INTS13 (ENSEASG00005006681) #10	ENSEASG00005024061	ENSEASG00005030774 #11	SSPN (ENSEASG00005013891) #12	BHLHE41 (ENSEASG00005032416) #13	RASSF8 (ENSEASG00005013894) #14	LMNTD1 (ENSEASG00005013897)	ENSEASG00005013898 #22	ETFRF1 (ENSEASG00005033483) #23	DNAI7 (ENSEASG00005013908) #24	ENSEASG00005025148 #25	BCAT1 (ENSEASG00005013924) #26	SOX5 (ENSEASG00005013931) #30	ETNK1 (ENSEASG00005013939) #31	C2CD5 (ENSEASG00005013950) #32	ST8SIA1 (ENSEASG00005032892)	ENSEASG00005013966 #33	CMAS (ENSEASG00005013969)	ABCC9 (ENSEASG00005013981)	KCNJ8 (ENSEASG00005031838)	ENSEASG00005014007	GYS2 (ENSEASG00005014013)	SPX (ENSEASG00005030033)
Donkey	MODERN SPECIES	3	FABP4 (ENSEASG00005020610)	FABP9 (ENSEASG00005020609)	PMP2 (ENSEASG00005020606)	FABP5 (ENSEASG00005020600)	ZNF704 (ENSEASG00005020587)	ZBTB10 (ENSEASG00005020583)	TPD52 (ENSEASG00005020578)	ENSEASG00005029366	ENSEASG00005020571	ENSEASG00005028912	ENSEASG00005001057	ENSEASG00005001030	PRDM14 (ENSEASG00005001068)	SLCO5A1 (ENSEASG00005001083)	SULF1 (ENSEASG00005001089)	ENSEASG00005001110 #22	C8orf34 (ENSEASG00005001119)	PREX2 (ENSEASG00005001136)	CPA6 (ENSEASG00005001157)	ARFGEF1 (ENSEASG00005001197)	CSPP1 (ENSEASG00005001209)	COPS5 (ENSEASG00005001239)	PPP1R42 (ENSEASG00005001251)	TCF24 (ENSEASG00005029980)	MCMDC2 (ENSEASG00005001284)	SGK3 (ENSEASG00005001304)	VCPIP1 (ENSEASG00005001311)	MYBL1 (ENSEASG00005001342)	VXN (ENSEASG00005026057)	ADHFE1 (ENSEASG00005001684)	RRS1 (ENSEASG00005001691)
Carnivora	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b
Felidae	ANCESTRAL SPECIES	2	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Cat	MODERN SPECIES	238	REP15 (ENSFCAG00000025027)	C12orf71 (ENSFCAG00000042244)	PPFIBP1 (ENSFCAG00000007533) ##7	SMCO2 (ENSFCAG00000000387)	ARNTL2 (ENSFCAG00000000386)	STK38L (ENSFCAG00000030270)	MED21 (ENSFCAG00000035227)	TM7SF3 (ENSFCAG00000025765)	FGFR1OP2 (ENSFCAG00000024282) #9	INTS13 (ENSFCAG00000004325) #10	ITPR2 (ENSFCAG00000004324) #11	SSPN (ENSFCAG00000035306) #12	BHLHE41 (ENSFCAG00000042690) #13	RASSF8 (ENSFCAG00000028575) #14	LMNTD1 (ENSFCAG00000027228)	KRAS (ENSFCAG00000026808) #22	ETFRF1 (ENSFCAG00000036819) #23	DNAI7 (ENSFCAG00000030767) #24	IRAG2 (ENSFCAG00000027350) #25	BCAT1 (ENSFCAG00000008611) #26	SOX5 (ENSFCAG00000002051) #30	ETNK1 (ENSFCAG00000022622) #31	C2CD5 (ENSFCAG00000025410) #32	ST8SIA1 (ENSFCAG00000037857)	ENSFCAG00000022267 #33	CMAS (ENSFCAG00000009874)	ABCC9 (ENSFCAG00000012523)	KCNJ8 (ENSFCAG00000025909)	ENSFCAG00000034803	GYS2 (ENSFCAG00000012636)	SPX (ENSFCAG00000012633)
Panthera	ANCESTRAL SPECIES		ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00390000006621.p.b	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Tiger	MODERN SPECIES	60	C12orf71 (ENSPTIG00000016335)	SMCO2 (ENSPTIG00000015662)	BMAL2 (ENSPTIG00000015319)	STK38L (ENSPTIG00000014491)	MED21 (ENSPTIG00000014470)	TM7SF3 (ENSPTIG00000014224)	ENSPTIG00000009962	FGFR1OP2 (ENSPTIG00000014013) #9	INTS13 (ENSPTIG00000013897) #10	ITPR2 (ENSPTIG00000013225) #11	ENSPTIG00000013161 #12	ENSPTIG00000013141 #13	RASSF8 (ENSPTIG00000012970) #14	LMNTD1 (ENSPTIG00000012835)	ENSPTIG00000009930	KRAS (ENSPTIG00000012574) #22	ETFRF1 (ENSPTIG00000012518) #23	DNAI7 (ENSPTIG00000012206) #24	IRAG2 (ENSPTIG00000011942) #25	BCAT1 (ENSPTIG00000011686) #26	SOX5 (ENSPTIG00000011175) #30
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00390000006621.p.b	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
leopard	MODERN SPECIES	22	C12orf71 (ENSPPRG00000006577)	BMAL2 (ENSPPRG00000020278)	STK38L (ENSPPRG00000024631)	MED21 (ENSPPRG00000024523)	TM7SF3 (ENSPPRG00000024445)	ENSPPRG00000021015	FGFR1OP2 (ENSPPRG00000024117) #9	INTS13 (ENSPPRG00000023929) #10	ITPR2 (ENSPPRG00000000552) #11	SSPN (ENSPPRG00000001270) #12	BHLHE41 (ENSPPRG00000002206) #13	RASSF8 (ENSPPRG00000002732) #14	ENSPPRG00000002786	LMNTD1 (ENSPPRG00000005840)	ENSPPRG00000021326	KRAS (ENSPPRG00000007389) #22	ETFRF1 (ENSPPRG00000008544) #23	DNAI7 (ENSPPRG00000009751) #24	IRAG2 (ENSPPRG00000011474) #25	BCAT1 (ENSPPRG00000014007) #26	ENSPPRG00000015924	ENSPPRG00000024478 #30	ETNK1 (ENSPPRG00000023960) #31	C2CD5 (ENSPPRG00000003405) #32	ENSPPRG00000021807	ST8SIA1 (ENSPPRG00000003913)	ENSPPRG00000004010 #33	CMAS (ENSPPRG00000004115)	ABCC9 (ENSPPRG00000007122)	KCNJ8 (ENSPPRG00000007195)	ENSPPRG00000007295
lion	MODERN SPECIES	7	C12orf71 (ENSPLOG00000016208)	PPFIBP1 (ENSPLOG00000016104) ##7	SMCO2 (ENSPLOG00000015964)	BMAL2 (ENSPLOG00000015029)	STK38L (ENSPLOG00000014888)	ENSPLOG00000014826	MED21 (ENSPLOG00000014783)	TM7SF3 (ENSPLOG00000014731)	FGFR1OP2 (ENSPLOG00000014661) #9	INTS13 (ENSPLOG00000014549) #10	ITPR2 (ENSPLOG00000014010) #11	SSPN (ENSPLOG00000013850) #12	BHLHE41 (ENSPLOG00000013781) #13	RASSF8 (ENSPLOG00000013701) #14	LMNTD1 (ENSPLOG00000013503)	KRAS (ENSPLOG00000013375) #22	ETFRF1 (ENSPLOG00000013319) #23	DNAI7 (ENSPLOG00000012922) #24	IRAG2 (ENSPLOG00000012818) #25	BCAT1 (ENSPLOG00000012638) #26	SOX5 (ENSPLOG00000012174) #30	ETNK1 (ENSPLOG00000012031) #31	C2CD5 (ENSPLOG00000011822) #32	ST8SIA1 (ENSPLOG00000011708)	ENSPLOG00000011632 #33	CMAS (ENSPLOG00000011579)	ABCC9 (ENSPLOG00000010955)	KCNJ8 (ENSPLOG00000010861)	ENSPLOG00000010845	GYS2 (ENSPLOG00000010733)	SPX (ENSPLOG00000003971)
Caniformia	ANCESTRAL SPECIES	19	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b
Canidae	ANCESTRAL SPECIES	8	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00940000160340.c.c.b.b	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h.c.b
Canis_lupus	ANCESTRAL SPECIES	14	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000159076.r	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00390000018085.a.b.a.d	ENSGT00390000018145.kc.a	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00940000160340.c.c.b.b	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT00910000148264	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h.c.b.a
Dog	MODERN SPECIES	19	SMCO2 (ENSCAFG00845024385)	ENSCAFG00845024620	STK38L (ENSCAFG00845025108)	MED21 (ENSCAFG00845025211)	TM7SF3 (ENSCAFG00845025291)	FGFR1OP2 (ENSCAFG00845025406) #9	INTS13 (ENSCAFG00845025493) #10	ENSCAFG00845025636	ITPR2 (ENSCAFG00845025705) #11	SSPN (ENSCAFG00845026060) #12	BHLHE41 (ENSCAFG00845026188) #13	RASSF8 (ENSCAFG00845026362) #14	ENSCAFG00845026487	ENSCAFG00845026573	LMNTD1 (ENSCAFG00845026629)	KRAS (ENSCAFG00845026771) #22	ETFRF1 (ENSCAFG00845012920) #23	DNAI7 (ENSCAFG00845013037) #24	LRMP (ENSCAFG00845013359) #25	ENSCAFG00845013478	BCAT1 (ENSCAFG00845013534) #26	SOX5 (ENSCAFG00845013678) #30	ENSCAFG00845013792	ETNK1 (ENSCAFG00845013814) #31	C2CD5 (ENSCAFG00845013960) #32	ST8SIA1 (ENSCAFG00845014219)	ENSCAFG00845014274 #33	CMAS (ENSCAFG00845014299)	ABCC9 (ENSCAFG00845014429)	KCNJ8 (ENSCAFG00845014663)	LDHB (ENSCAFG00845014696)
Dingo	MODERN SPECIES	295	SMCO2 (ENSCAFG00020013467)	BMAL2 (ENSCAFG00020013461)	STK38L (ENSCAFG00020012999)	MED21 (ENSCAFG00020012972)	TM7SF3 (ENSCAFG00020012969)	FGFR1OP2 (ENSCAFG00020012964) #9	INTS13 (ENSCAFG00020012960) #10	ENSCAFG00020012958	ITPR2 (ENSCAFG00020012877) #11	SSPN (ENSCAFG00020012850) #12	BHLHE41 (ENSCAFG00020012838) #13	RASSF8 (ENSCAFG00020012835) #14	ENSCAFG00020012829	ENSCAFG00020012827	LMNTD1 (ENSCAFG00020012824)	KRAS (ENSCAFG00020012793) #22	ETFRF1 (ENSCAFG00020012787) #23	DNAI7 (ENSCAFG00020012784) #24	IRAG2 (ENSCAFG00020012771) #25	ENSCAFG00020012764	BCAT1 (ENSCAFG00020012762) #26	ENSCAFG00020012732 #30	ENSCAFG00020012707 #30	ENSCAFG00020012702	ETNK1 (ENSCAFG00020012685) #31	C2CD5 (ENSCAFG00020012652) #32	ENSCAFG00020012638	ST8SIA1 (ENSCAFG00020012635)	ENSCAFG00020012631 #33	CMAS (ENSCAFG00020012628)	ABCC9 (ENSCAFG00020008129)
Red fox	MODERN SPECIES	18	ENSVVUG00000030257	ENSVVUG00000030260	SMCO2 (ENSVVUG00000030266)	BMAL2 (ENSVVUG00000030272)	STK38L (ENSVVUG00000030277)	MED21 (ENSVVUG00000030287)	TM7SF3 (ENSVVUG00000030290)	FGFR1OP2 (ENSVVUG00000030294) #9	INTS13 (ENSVVUG00000030299) #10	ITPR2 (ENSVVUG00000030334) #11	SSPN (ENSVVUG00000030340) #12	BHLHE41 (ENSVVUG00000030341) #13	RASSF8 (ENSVVUG00000030342) #14	ENSVVUG00000030343	LMNTD1 (ENSVVUG00000030344)	ENSVVUG00000030345 #22	ETFRF1 (ENSVVUG00000030346) #23	DNAI7 (ENSVVUG00000030347) #24	IRAG2 (ENSVVUG00000030348) #25	ENSVVUG00000030351	BCAT1 (ENSVVUG00000030352) #26	SOX5 (ENSVVUG00000000151) #30	ENSVVUG00000000296	ETNK1 (ENSVVUG00000000469) #31	C2CD5 (ENSVVUG00000000688) #32	ST8SIA1 (ENSVVUG00000000809)	ENSVVUG00000000816 #33	CMAS (ENSVVUG00000000839)	ABCC9 (ENSVVUG00000000871)	KCNJ8 (ENSVVUG00000001060)	ENSVVUG00000001066
Caniformia_b	ANCESTRAL SPECIES	17	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h.a.b	ENSGT00390000018612.a.b	ENSGT00390000012501
Ursidae	ANCESTRAL SPECIES	25	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT01030000234582.e.a.j	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h.a.b	ENSGT00390000018612.a.b	ENSGT00390000012501
Giant Panda	MODERN SPECIES	7	REP15 (ENSAMEG00000020274)	ENSAMEG00000011606	PPFIBP1 (ENSAMEG00000011565) ##7	SMCO2 (ENSAMEG00000011608)	BMAL2 (ENSAMEG00000011610)	STK38L (ENSAMEG00000011633)	MED21 (ENSAMEG00000011670)	TM7SF3 (ENSAMEG00000011677)	FGFR1OP2 (ENSAMEG00000011692) #9	INTS13 (ENSAMEG00000011715) #10	ENSAMEG00000011761	ITPR2 (ENSAMEG00000011767) #11	SSPN (ENSAMEG00000011902) #12	BHLHE41 (ENSAMEG00000030378) #13	RASSF8 (ENSAMEG00000011910) #14	ENSAMEG00000007529 #22	ETFRF1 (ENSAMEG00000030820) #23	DNAI7 (ENSAMEG00000007559) #24	IRAG2 (ENSAMEG00000007590) #25	BCAT1 (ENSAMEG00000007615) #26	SOX5 (ENSAMEG00000007732) #30	ETNK1 (ENSAMEG00000007754) #31	C2CD5 (ENSAMEG00000007770) #32	ST8SIA1 (ENSAMEG00000007885)	ENSAMEG00000007911 #33	CMAS (ENSAMEG00000007936)	ABCC9 (ENSAMEG00000016153)	KCNJ8 (ENSAMEG00000027736)	ENSAMEG00000016175	GYS2 (ENSAMEG00000016198)	SPX (ENSAMEG00000016229)
Ursus	ANCESTRAL SPECIES	155				ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT01030000234582.e.a.j	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000185059	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h.a.b	ENSGT00390000018612.a.b
Polar bear	MODERN SPECIES	182				BMAL2 (ENSUMAG00000003681)	STK38L (ENSUMAG00000003628)	ENSUMAG00000003616	TM7SF3 (ENSUMAG00000003462)	ENSUMAG00000003437	FGFR1OP2 (ENSUMAG00000003427) #9	INTS13 (ENSUMAG00000003398) #10	ENSUMAG00000003389	ITPR2 (ENSUMAG00000003322) #11	SSPN (ENSUMAG00000003311) #12	ENSUMAG00000003300 #13	RASSF8 (ENSUMAG00000003293) #14	KRAS (ENSUMAG00000003274) #22	ETFRF1 (ENSUMAG00000003271) #23	DNAI7 (ENSUMAG00000003217) #24	IRAG2 (ENSUMAG00000003170) #25	BCAT1 (ENSUMAG00000003124) #26	ENSUMAG00000003043 #30	ENSUMAG00000002956 #30	ENSUMAG00000002938	ETNK1 (ENSUMAG00000002922) #31	C2CD5 (ENSUMAG00000001993) #32	ST8SIA1 (ENSUMAG00000001743)	ENSUMAG00000001739 #33	CMAS (ENSUMAG00000001709)	ABCC9 (ENSUMAG00000001657)	KCNJ8 (ENSUMAG00000001648)	ENSUMAG00000001639
American black bear	MODERN SPECIES	7368																KRAS (ENSUAMG00000016388) #22	ETFRF1 (ENSUAMG00000016389) #23
Mustelinae	ANCESTRAL SPECIES	93	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a.b #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h.a.b	ENSGT00390000018612.a.b	ENSGT00390000012501
American mink	MODERN SPECIES	96	C12orf71 (ENSNVIG00000001995)	PPFIBP1 (ENSNVIG00000001780) ##7	SMCO2 (ENSNVIG00000001750)	BMAL2 (ENSNVIG00000001547)	STK38L (ENSNVIG00000001523)	ENSNVIG00000001519	MED21 (ENSNVIG00000001510)	TM7SF3 (ENSNVIG00000001450)	ENSNVIG00000001439 #9	INTS13 (ENSNVIG00000001404) #10	ITPR2 (ENSNVIG00000001309) #11	SSPN (ENSNVIG00000001285) #12	ENSNVIG00000001271 #13	RASSF8 (ENSNVIG00000001234) #14	LMNTD1 (ENSNVIG00000001215)	RASK (ENSNVIG00000001175) #22	ETFRF1 (ENSNVIG00000001147) #23	DNAI7 (ENSNVIG00000000988) #24	IRAG2 (ENSNVIG00000000935) #25	Q68DQ7 (ENSNVIG00000000861) #26	SOX5 (ENSNVIG00000000784) #30	ENSNVIG00000000776	ETNK1 (ENSNVIG00000000767) #31	C2CD5 (ENSNVIG00000000073) #32	ST8SIA1 (ENSNVIG00000020524)	ENSNVIG00000020517 #33	CMAS (ENSNVIG00000020500)	ABCC9 (ENSNVIG00000020358)	IRK8 (ENSNVIG00000020347)	ENSNVIG00000020311	GYS2 (ENSNVIG00000020281)
Ferret	MODERN SPECIES	393		ENSMPUG00000010525	SMCO2 (ENSMPUG00000010518)	BMAL2 (ENSMPUG00000010512)	STK38L (ENSMPUG00000010502)	MED21 (ENSMPUG00000010498)	TM7SF3 (ENSMPUG00000010491)	FGFR1OP2 (ENSMPUG00000010483) #9	INTS13 (ENSMPUG00000010392) #10	ITPR2 (ENSMPUG00000010371) #11	ENSMPUG00000010363	SSPN (ENSMPUG00000010350) #12	ENSMPUG00000010346 #13	RASSF8 (ENSMPUG00000010343) #14	LMNTD1 (ENSMPUG00000010334)	KRAS (ENSMPUG00000010291) #22	DNAI7 (ENSMPUG00000010283) #24	IRAG2 (ENSMPUG00000010212) #25	ENSMPUG00000010205 #25
Eulipotyphla	ANCESTRAL SPECIES	1250																ENSGT00940000155871 #22	ENSGT00390000001810 #23
Hedgehog	MODERN SPECIES	14685																KRAS (ENSEEUG00000003058) #22	ETFRF1 (ENSEEUG00000002996) #23
Common shrew	MODERN SPECIES	6823																KRAS (ENSSARG00000007956) #22	ETFRF1 (ENSSARG00000007952) #23
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Afrotheria	ANCESTRAL SPECIES	56	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Afrotheria_a	ANCESTRAL SPECIES	53	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00390000018322	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00940000163137 #33	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525.h	ENSGT00390000018612.a.b	ENSGT00390000012501
Elephant	MODERN SPECIES	196	MRPS35 (ENSLAFG00000010490)	PPFIBP1 (ENSLAFG00000010485) ##7	C12orf71 (ENSLAFG00000027809)	SMCO2 (ENSLAFG00000002614)	BMAL2 (ENSLAFG00000002612)	STK38L (ENSLAFG00000020791)	MED21 (ENSLAFG00000030391)	TM7SF3 (ENSLAFG00000012482)	FGFR1OP2 (ENSLAFG00000012476) #9	INTS13 (ENSLAFG00000012475) #10	ENSLAFG00000005681 #11	SSPN (ENSLAFG00000005676) #12	ENSLAFG00000030711 #13	RASSF8 (ENSLAFG00000026594) #14	LMNTD1 (ENSLAFG00000004100)	KRAS (ENSLAFG00000029239) #22	ETFRF1 (ENSLAFG00000008272) #23	DNAI7 (ENSLAFG00000012438) #24	IRAG2 (ENSLAFG00000012434) #25	BCAT1 (ENSLAFG00000017969) #26	SOX5 (ENSLAFG00000014616) #30	ETNK1 (ENSLAFG00000015898) #31	C2CD5 (ENSLAFG00000022820) #32	ST8SIA1 (ENSLAFG00000010423)	ENSLAFG00000030225 #33	CMAS (ENSLAFG00000005720)	ABCC9 (ENSLAFG00000004848)	KCNJ8 (ENSLAFG00000031038)	LDHB (ENSLAFG00000000972)	GYS2 (ENSLAFG00000000969)	SPX (ENSLAFG00000000967)
Hyrax	MODERN SPECIES	1505																KRAS (ENSPCAG00000003027) #22	ETFRF1 (ENSPCAG00000003015) #23	DNAI7 (ENSPCAG00000002928) #24	IRAG2 (ENSPCAG00000002837) #25
Tenrec	MODERN SPECIES	15934																KRAS (ENSETEG00000002355) #22
Xenarthra	ANCESTRAL SPECIES	126	ENSGT00390000004933	ENSGT00940000160124	ENSGT00940000153377.C	ENSGT00390000003443	ENSGT01050000244951.a.a ##7	ENSGT00940000153380.A	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30
Armadillo	MODERN SPECIES	4066							ENSDNOG00000025573	MED21 (ENSDNOG00000010041)	TM7SF3 (ENSDNOG00000010018)	FGFR1OP2 (ENSDNOG00000006966) #9	INTS13 (ENSDNOG00000012051) #10	ITPR2 (ENSDNOG00000005229) #11	SSPN (ENSDNOG00000045508) #12	RASSF8 (ENSDNOG00000048366) #14	ENSDNOG00000044438	KRAS (ENSDNOG00000046741) #22	ETFRF1 (ENSDNOG00000018534) #23	DNAI7 (ENSDNOG00000000445) #24	ENSDNOG00000032383 #25	BCAT1 (ENSDNOG00000005608) #26	SOX5 (ENSDNOG00000019346) #30
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000157638	ENSGT00950000182835.d.b	ENSGT00790000123099	ENSGT00940000153544.b.m.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000155614	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00390000009210	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00390000018612.a.b	ENSGT00390000012501
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00950000182835.d.b	ENSGT00790000123099	ENSGT00940000160423	ENSGT00940000153544.b.m.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00970000193562	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000155614	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00390000009210	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00390000018612.a.b	ENSGT00390000012501
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00950000182835.d.b	ENSGT00790000123099	ENSGT00940000160423	ENSGT00940000153544.b.m.b	ENSGT00940000153544.b.m.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00390000009210	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00390000018612.a.b	ENSGT00390000012501
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00940000157638	ENSGT00950000182835.d.b	ENSGT00940000160423	ENSGT00940000153544.b.m.a.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00970000193562	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00940000155614	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000009532.A.d.a #26	ENSGT00940000156122 #30	ENSGT00390000009210	ENSGT00950000182939.b.a.b #31	ENSGT00390000000212 #32	ENSGT01030000234535.D	ENSGT00390000004237	ENSGT00940000156680.b.b	ENSGT00990000203615.a.a.b	ENSGT00940000153525	ENSGT00390000018612.a.b	ENSGT00390000012501
Common wonbat	MODERN SPECIES	1064	ITIH5 (ENSVURG00010014526)	ENSVURG00010014550	PRKCQ (ENSVURG00010014603)	ENSVURG00010015086	BMAL2 (ENSVURG00010015116)	STK38L (ENSVURG00010015140)	MED21 (ENSVURG00010015164)	TM7SF3 (ENSVURG00010015203)	ENSVURG00010015223 #9	INTS13 (ENSVURG00010015245) #10	ITPR2 (ENSVURG00010015309) #11	SMC1A (ENSVURG00010015442)	ENSVURG00010015454 #12	BHLHE41 (ENSVURG00010015466) #13	RASSF8 (ENSVURG00010015473) #14	KRAS (ENSVURG00010015490) #22	ETFRF1 (ENSVURG00010015499) #23	DNAI7 (ENSVURG00010015507) #24	BCAT1 (ENSVURG00010015554) #26	SOX5 (ENSVURG00010016055) #30	ENSVURG00010016116	ETNK1 (ENSVURG00010016127) #31	C2CD5 (ENSVURG00010016161) #32	ST8SIA1 (ENSVURG00010016229)	CMAS (ENSVURG00010016240)	ABCC9 (ENSVURG00010016276)	KCNJ8 (ENSVURG00010016410)	LDHB (ENSVURG00010016421)	GYS2 (ENSVURG00010016441)	ENSVURG00010016461	GOLT1B (ENSVURG00010016474) #37
koala	MODERN SPECIES	157	BMAL2 (ENSPCIG00000019259)	ENSPCIG00000032191	ENSPCIG00000019245	ENSPCIG00000035681	MED21 (ENSPCIG00000019241)	TM7SF3 (ENSPCIG00000019239)	FGFR1OP2 (ENSPCIG00000019236) #9	ENSPCIG00000019238	INTS13 (ENSPCIG00000019233) #10	ITPR2 (ENSPCIG00000013497) #11	SMC1A (ENSPCIG00000013481)	SSPN (ENSPCIG00000002872) #12	BHLHE41 (ENSPCIG00000028661) #13	RASSF8 (ENSPCIG00000028660) #14	ENSPCIG00000028658	KRAS (ENSPCIG00000014229) #22	ENSPCIG00000032167 #23	DNAI7 (ENSPCIG00000014221) #24	IRAG2 (ENSPCIG00000014217) #25	BCAT1 (ENSPCIG00000028646) #26
Wallaby	MODERN SPECIES	3918																ENSMEUG00000012493 #22
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000013183	ENSSHAG00000012480	ENSSHAG00000025940	STK38L (ENSSHAG00000011764)	MED21 (ENSSHAG00000029070)	TM7SF3 (ENSSHAG00000010020)	ENSSHAG00000022761	FGFR1OP2 (ENSSHAG00000009822) #9	INTS13 (ENSSHAG00000009510) #10	ENSSHAG00000006912	ITPR2 (ENSSHAG00000002089) #11	SSPN (ENSSHAG00000028577) #12	BHLHE41 (ENSSHAG00000028369) #13	RASSF8 (ENSSHAG00000012373) #14	ENSSHAG00000009195	KRAS (ENSSHAG00000006631) #22	DNAI7 (ENSSHAG00000005318) #24	IRAG2 (ENSSHAG00000004469) #25	BCAT1 (ENSSHAG00000002407) #26	SOX5 (ENSSHAG00000032245) #30	ENSSHAG00000028766	ETNK1 (ENSSHAG00000024329) #31	C2CD5 (ENSSHAG00000026240) #32	ST8SIA1 (ENSSHAG00000025650)	CMAS (ENSSHAG00000013887)	ABCC9 (ENSSHAG00000014330)	KCNJ8 (ENSSHAG00000015085)	LDHB (ENSSHAG00000015400)	GYS2 (ENSSHAG00000015521)	ENSSHAG00000024034	GOLT1B (ENSSHAG00000021470) #37
Opossum	DUPLICATION
Opossum	MODERN SPECIES	7	ENSMODG00000000578	CDC42EP1 (ENSMODG00000000546)	LGALS2 (ENSMODG00000000538)	GGA1 (ENSMODG00000000524)	ENSMODG00000041229	PDXP (ENSMODG00000040984)	ENSMODG00000000457	ENSMODG00000046164	ENSMODG00000047267	ENSMODG00000051040	ENSMODG00000041068	NOL12 (ENSMODG00000000273)	ENSMODG00000049062	ENSMODG00000048823	ENSMODG00000017456	KRAS (ENSMODG00000017458) #22	ETFRF1 (ENSMODG00000017460) #23	DNAI7 (ENSMODG00000017466) #24	IRAG2 (ENSMODG00000017472) #25	BCAT1 (ENSMODG00000017691) #26	SOX5 (ENSMODG00000017704) #30	ENSMODG00000036706	ENSMODG00000024904	ETNK1 (ENSMODG00000017711) #31	C2CD5 (ENSMODG00000017718) #32	ST8SIA1 (ENSMODG00000017726)	ENSMODG00000049680	CMAS (ENSMODG00000017742)	ABCC9 (ENSMODG00000017771)	KCNJ8 (ENSMODG00000049086)	ENSMODG00000045049
Opossum	MODERN SPECIES	4	CXCL11 (ENSMODG00000039309)	NUP54 (ENSMODG00000019296)	SCARB2 (ENSMODG00000019298)	ENSMODG00000019294	STBD1 (ENSMODG00000041735)	CCDC158 (ENSMODG00000019307)	HPSE (ENSMODG00000019304)	ENSMODG00000037972	COQ2 (ENSMODG00000019308)	ENSMODG00000025523	ENSMODG00000019309	COPS4 (ENSMODG00000019311)	LIN54 (ENSMODG00000019314)	MRPL1 (ENSMODG00000011704)	CNOT6L (ENSMODG00000011744)	ENSMODG00000025248 #22	ENSMODG00000047582	ENSMODG00000029642	ENSMODG00000048221	CCNG2 (ENSMODG00000011779)	CCNI (ENSMODG00000011794)	SEPTIN11 (ENSMODG00000011825)	ENSMODG00000046931	ENSMODG00000011853	RASGEF1B (ENSMODG00000011880)	ENSMODG00000046459	HNRNPD (ENSMODG00000011898)	ENSMODG00000011905	ENSMODG00000011916	ENSMODG00000011924	TMEM150C (ENSMODG00000011930)
Sauria	ANCESTRAL SPECIES	4	ENSGT01050000244951.a.a ##7	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000167397.b	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00910000148264	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31
Lepidosauria	ANCESTRAL SPECIES	75	ENSGT00390000009532.A.d.b ##26	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946	ENSGT00390000010799	ENSGT00940000159110	ENSGT00510000048192	ENSGT00940000166966	ENSGT00530000064424	ENSGT00940000166365	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000014026	ENSGT00950000182956.b.a	ENSGT00940000161485	ENSGT00940000163157	ENSGT01090000260003.a.b.a	ENSGT00960000188719	ENSGT00950000182841.b.b.b	ENSGT00950000182841.b.b.a	ENSGT00390000018612.a.a	ENSGT00940000154700	ENSGT00940000168900	ENSGT00940000165851	ENSGT00390000017397	ENSGT00940000175652	ENSGT00940000158989
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806	ENSGT00940000159247	ENSGT00940000155461.E	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064424	ENSGT00940000166365	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000008767.d	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806	ENSGT00940000159247	ENSGT00940000155461.E	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Lizard	DUPLICATION
Lizard	MODERN SPECIES	969	ENSACAG00000043706	ENSACAG00000017265	ENSACAG00000017279	ENSACAG00000024093	ENSACAG00000045465	ENSACAG00000017296	SLC17A7 (ENSACAG00000017314)	PIH1D1 (ENSACAG00000017335)	ENSACAG00000037354	ENSACAG00000028856	FLT3LG (ENSACAG00000017350)	ENSACAG00000017351	ENSACAG00000045034	pth2 (ENSACAG00000041461)	ENSACAG00000029317	ENSACAG00000017404 #22	ENSACAG00000017423	CD37 (ENSACAG00000017465)	ENSACAG00000017478	ENSACAG00000017500
Lizard	MODERN SPECIES	1712																ENSACAG00000016948 #22	ENSACAG00000016967 #23
Elapidae	ANCESTRAL SPECIES	6	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806	ENSGT00940000159247	ENSGT00940000155461.E	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b.q.a	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806	ENSGT00940000159247	ENSGT00940000155461.E	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b.q.a	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	9271																ENSLLTG00000012504 #22
Blue-lipped sea krait	MODERN SPECIES	3848																KRAS (ENSLLTG00000008091) #22	ETFRF1 (ENSLLTG00000008231) #23
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806	ENSGT00940000159247	ENSGT00940000155461.E	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00950000185347	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b.q.a	ENSGT00940000156680.b.b.r	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT00390000006233.c.b.x	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	53	DNAAF3 (ENSPTXG00000015595)	TNNI3 (ENSPTXG00000015594)	ENSPTXG00000015593	BCAT2 (ENSPTXG00000015592) ##26	ENSPTXG00000015591	ENSPTXG00000015589	NUCB1 (ENSPTXG00000015587)	ENSPTXG00000015584	DHDH (ENSPTXG00000015582)	ENSPTXG00000015578	SLC17A7 (ENSPTXG00000015577)	ENSPTXG00000015576	ENSPTXG00000015575	ENSPTXG00000015574	PTH2 (ENSPTXG00000015573)	ENSPTXG00000015571 #22	ENSPTXG00000015570	ENSPTXG00000015343	CD37 (ENSPTXG00000015338)	ENSPTXG00000015332	BAX (ENSPTXG00000015327)	ENSPTXG00000015324	ENSPTXG00000015321	ENSPTXG00000015320	GYS1 (ENSPTXG00000015316)	PRMT1 (ENSPTXG00000015314)	ENSPTXG00000015313	ENSPTXG00000015312	ENSPTXG00000015310	TBC1D17 (ENSPTXG00000014692)	ENSPTXG00000014683
Eastern brown snake	MODERN SPECIES												GATA3 (ENSPTXG00000000002)	CELF2 (ENSPTXG00000000003)	USP6NL (ENSPTXG00000000004)	ECHDC3 (ENSPTXG00000000005)	PROSER2 (ENSPTXG00000000006)	KRAS (ENSPTXG00000000007) #22	ETFRF1 (ENSPTXG00000000008) #23	DNAI7 (ENSPTXG00000000009) #24	IRAG2 (ENSPTXG00000000010) #25	GYS2 (ENSPTXG00000000026)	LDHB (ENSPTXG00000000083)	KCNJ8 (ENSPTXG00000000128)	ENSPTXG00000000138	ENSPTXG00000000282	CMAS (ENSPTXG00000001620)	ENSPTXG00000001635 #33	ENSPTXG00000001676	ST8SIA1 (ENSPTXG00000001689)	C2CD5 (ENSPTXG00000001695) #32	ETNK1 (ENSPTXG00000001704) #31	SOX5 (ENSPTXG00000001706) #30
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	91	TNNI3 (ENSNSUG00000004285)	ENSNSUG00000004297	BCAT2 (ENSNSUG00000004347) ##26	ENSNSUG00000005838	ENSNSUG00000005841	NUCB1 (ENSNSUG00000005842)	TULP2 (ENSNSUG00000005843)	ENSNSUG00000005844	ENSNSUG00000005845	SLC17A7 (ENSNSUG00000005848)	ENSNSUG00000005849	ENSNSUG00000005850	ENSNSUG00000005852	ENSNSUG00000005853	ENSNSUG00000005854	ENSNSUG00000005856 #22	ENSNSUG00000005857	ENSNSUG00000005858	ENSNSUG00000005860	BAX (ENSNSUG00000005862)	ENSNSUG00000005863	ENSNSUG00000005864	ENSNSUG00000005865	GYS1 (ENSNSUG00000005866)	PRMT1 (ENSNSUG00000005867)	ENSNSUG00000005868	ENSNSUG00000005869	ENSNSUG00000005880	TBC1D17 (ENSNSUG00000005881)	ENSNSUG00000005896	ENSNSUG00000005897
Mainland tiger snake	MODERN SPECIES	98											CELF2 (ENSNSUG00000003254)	ENSNSUG00000003245	ENSNSUG00000003243	ECHDC3 (ENSNSUG00000003242)	PROSER2 (ENSNSUG00000003240)	KRAS (ENSNSUG00000003239) #22	ETFRF1 (ENSNSUG00000003238) #23	DNAI7 (ENSNSUG00000003224) #24	GYS2 (ENSNSUG00000003222)	ENSNSUG00000003221	LDHB (ENSNSUG00000003217)	KCNJ8 (ENSNSUG00000003215)	ENSNSUG00000003213	ENSNSUG00000003212	ENSNSUG00000003195 #33	ENSNSUG00000003191	ST8SIA1 (ENSNSUG00000003190)	C2CD5 (ENSNSUG00000002348) #32	ETNK1 (ENSNSUG00000002341) #31	SOX5 (ENSNSUG00000002195) #30	BCAT1 (ENSNSUG00000002183) #26
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	337	HSPBP1 (ENSNNAG00000003806)	PPP6R1 (ENSNNAG00000003751)	TMEM86B (ENSNNAG00000003695)	SYT5 (ENSNNAG00000003624)	TNNI3 (ENSNNAG00000012753)	ENSNNAG00000012725	BCAT2 (ENSNNAG00000012698) ##26	HSD17B14 (ENSNNAG00000012604)	ENSNNAG00000012501	DHDH (ENSNNAG00000012266)	ENSNNAG00000012197	SLC17A7 (ENSNNAG00000012026)	ENSNNAG00000011986	ENSNNAG00000011851	ENSNNAG00000011833	ENSNNAG00000011825 #22	ENSNNAG00000011809	ENSNNAG00000011578	ENSNNAG00000011526	ENSNNAG00000011329	BAX (ENSNNAG00000011197)	ENSNNAG00000011178	ENSNNAG00000011165	ENSNNAG00000011147	GYS1 (ENSNNAG00000011072)	PRMT1 (ENSNNAG00000010988)	ENSNNAG00000010960	ENSNNAG00000010934	ENSNNAG00000010910	TBC1D17 (ENSNNAG00000010847)	ENSNNAG00000010822
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	6	ETNK1 (ENSNNAG00000005465) #31	ENSNNAG00000005512	ENSNNAG00000005524	ST8SIA1 (ENSNNAG00000005538)	ENSNNAG00000005572 #33	ENSNNAG00000005635	ENSNNAG00000005651	ENSNNAG00000005664	KCNJ8 (ENSNNAG00000005747)	LDHB (ENSNNAG00000005766)	ENSNNAG00000005791	GYS2 (ENSNNAG00000005810)	ENSNNAG00000005881 #25	DNAI7 (ENSNNAG00000005967) #24	ETFRF1 (ENSNNAG00000006027) #23	ENSNNAG00000006042 #22	ENSNNAG00000006053 #22	PROSER2 (ENSNNAG00000006066)	ECHDC3 (ENSNNAG00000006078)	ENSNNAG00000006098	ENSNNAG00000006139	CELF2 (ENSNNAG00000006183)	GATA3 (ENSNNAG00000006620)	TAF3 (ENSNNAG00000006639)	ATP5F1C (ENSNNAG00000006690)	KIN (ENSNNAG00000006747)	ITIH2 (ENSNNAG00000006817)	ITIH5 (ENSNNAG00000006937)	SFMBT2 (ENSNNAG00000007046)	PRKCQ (ENSNNAG00000007141)	PFKFB3 (ENSNNAG00000007174)
Indian cobra	MODERN SPECIES	6	RBM17 (ENSNNAG00000007249)	PFKFB3 (ENSNNAG00000007174)	PRKCQ (ENSNNAG00000007141)	SFMBT2 (ENSNNAG00000007046)	ITIH5 (ENSNNAG00000006937)	ITIH2 (ENSNNAG00000006817)	KIN (ENSNNAG00000006747)	ATP5F1C (ENSNNAG00000006690)	TAF3 (ENSNNAG00000006639)	GATA3 (ENSNNAG00000006620)	CELF2 (ENSNNAG00000006183)	ENSNNAG00000006139	ENSNNAG00000006098	ECHDC3 (ENSNNAG00000006078)	PROSER2 (ENSNNAG00000006066)	ENSNNAG00000006053 #22	ENSNNAG00000006042 #22	ETFRF1 (ENSNNAG00000006027) #23	DNAI7 (ENSNNAG00000005967) #24	ENSNNAG00000005881 #25	GYS2 (ENSNNAG00000005810)	ENSNNAG00000005791	LDHB (ENSNNAG00000005766)	KCNJ8 (ENSNNAG00000005747)	ENSNNAG00000005664	ENSNNAG00000005651	ENSNNAG00000005635	ENSNNAG00000005572 #33	ST8SIA1 (ENSNNAG00000005538)	ENSNNAG00000005524	ENSNNAG00000005512
Laterata	ANCESTRAL SPECIES	6	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806	ENSGT00940000159247	ENSGT00940000155461.E	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00970000198077	ENSGT00410000026259	ENSGT00990000204711	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	38	HSD17B14 (ENSSMRG00000004074)	ENSSMRG00000004083	ENSSMRG00000004118	NUCB1 (ENSSMRG00000004119)	ENSSMRG00000004122	ENSSMRG00000004125	ENSSMRG00000004128	RPL13A (ENSSMRG00000004141)	ENSSMRG00000004146	SLC17A7 (ENSSMRG00000004150)	ENSSMRG00000004151	ENSSMRG00000004154	ENSSMRG00000004165	ENSSMRG00000004170	ENSSMRG00000004174	ENSSMRG00000004175 #22	DKKL1 (ENSSMRG00000004180)	ENSSMRG00000004186	CD37 (ENSSMRG00000004187)	ENSSMRG00000004189	ENSSMRG00000004198	ENSSMRG00000004199	ENSSMRG00000004204	ENSSMRG00000004205	GYS1 (ENSSMRG00000004209)	PRMT1 (ENSSMRG00000004215)	ENSSMRG00000004219	ENSSMRG00000004222	AKT1S1 (ENSSMRG00000004223)	TBC1D17 (ENSSMRG00000004224)	ENSSMRG00000004229
Argentine black and white tegu	MODERN SPECIES	6	PFKFB3 (ENSSMRG00000007457)	PRKCQ (ENSSMRG00000007248)	SFMBT2 (ENSSMRG00000007220)	ITIH5 (ENSSMRG00000007209)	ENSSMRG00000007205	ITIH2 (ENSSMRG00000007181)	KIN (ENSSMRG00000007178)	ATP5F1C (ENSSMRG00000007172)	TAF3 (ENSSMRG00000007170)	GATA3 (ENSSMRG00000007132)	ENSSMRG00000007119	CELF2 (ENSSMRG00000007088)	USP6NL (ENSSMRG00000007038)	ECHDC3 (ENSSMRG00000007015)	PROSER2 (ENSSMRG00000007011)	KRAS (ENSSMRG00000006993) #22	ETFRF1 (ENSSMRG00000006986) #23	DNAI7 (ENSSMRG00000006979) #24	IRAG2 (ENSSMRG00000006977) #25	SPX (ENSSMRG00000006975)	GYS2 (ENSSMRG00000006963)	LDHB (ENSSMRG00000006917)	KCNJ8 (ENSSMRG00000006916)	ABCC9 (ENSSMRG00000006859)	CMAS (ENSSMRG00000006846)	ENSSMRG00000006832 #33	ST8SIA1 (ENSSMRG00000006824)	C2CD5 (ENSSMRG00000006791) #32	ETNK1 (ENSSMRG00000006775) #31	SOX5 (ENSSMRG00000006744) #30	ENSSMRG00000006690
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	4	NUCB1 (ENSPMRG00000018271)	TULP2 (ENSPMRG00000018214)	ENSPMRG00000018189	ENSPMRG00000018171	ENSPMRG00000018162	ENSPMRG00000018149	ENSPMRG00000018140	SLC17A7 (ENSPMRG00000018120)	PIH1D1 (ENSPMRG00000018107)	ENSPMRG00000018017	FLT3LG (ENSPMRG00000018003)	ENSPMRG00000017996	ENSPMRG00000017985	ENSPMRG00000017978	ENSPMRG00000017973	ENSPMRG00000017966 #22	ENSPMRG00000017958	ENSPMRG00000017955	TEAD2 (ENSPMRG00000017948)	CD37 (ENSPMRG00000017941)	ENSPMRG00000017925	BAX (ENSPMRG00000017916)	ENSPMRG00000017911	ENSPMRG00000017910	GYS1 (ENSPMRG00000017901)	PRMT1 (ENSPMRG00000017893)	ENSPMRG00000022359	ENSPMRG00000022357	AKT1S1 (ENSPMRG00000022352)	TBC1D17 (ENSPMRG00000022346)	ENSPMRG00000022342
Common wall lizard	MODERN SPECIES	1	GATA3 (ENSPMRG00000012950)	ENSPMRG00000012942	ENSPMRG00000012933	ENSPMRG00000012930	ENSPMRG00000012923	ENSPMRG00000012917	ENSPMRG00000012912	CELF2 (ENSPMRG00000012885)	ENSPMRG00000023856	USP6NL (ENSPMRG00000023855)	ECHDC3 (ENSPMRG00000023852)	ENSPMRG00000023851	ENSPMRG00000023850	ETFRF1 (ENSPMRG00000023849) #23	ENSPMRG00000023848	ENSPMRG00000023842 #22	IRAG2 (ENSPMRG00000023839) #25	SPX (ENSPMRG00000023835)	GYS2 (ENSPMRG00000023832)	ENSPMRG00000023831	LDHB (ENSPMRG00000023829)	KCNJ8 (ENSPMRG00000023828)	ABCC9 (ENSPMRG00000023784)	CMAS (ENSPMRG00000023745)	ENSPMRG00000023742 #33	ST8SIA1 (ENSPMRG00000023738)	ENSPMRG00000023736	C2CD5 (ENSPMRG00000023696) #32	ETNK1 (ENSPMRG00000023668) #31	ENSPMRG00000023665	SOX5 (ENSPMRG00000023658) #30
tuatara	DUPLICATION
tuatara	MODERN SPECIES	915														ENSSPUG00000003391	ENSSPUG00000003352	ENSSPUG00000003341 #22	ENSSPUG00000003334	ENSSPUG00000003318	AKT1S1 (ENSSPUG00000003308)
tuatara	MODERN SPECIES	1190									CELF2 (ENSSPUG00000018833)	ENSSPUG00000018828	ENSSPUG00000018825	ENSSPUG00000018822	ENSSPUG00000018821	ECHDC3 (ENSSPUG00000018805)	ENSSPUG00000018793	KRAS (ENSSPUG00000018789) #22	ETFRF1 (ENSSPUG00000018785) #23	DNAI7 (ENSSPUG00000018744) #24	IRAG2 (ENSSPUG00000018711) #25	SPX (ENSSPUG00000018708)	GYS2 (ENSSPUG00000018699)	ENSSPUG00000018696	LDHB (ENSSPUG00000018692)	KCNJ8 (ENSSPUG00000018690)	ABCC9 (ENSSPUG00000018683)	CMAS (ENSSPUG00000018674)	ENSSPUG00000018667 #33	ST8SIA1 (ENSSPUG00000018662)	C2CD5 (ENSSPUG00000018657) #32	ETNK1 (ENSSPUG00000018649) #31	SOX5 (ENSSPUG00000018638) #30
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Testudinidae	ANCESTRAL SPECIES	14	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	2359	ENSCABG00000000596	NUCB1 (ENSCABG00000000601)	ENSCABG00000000609	ENSCABG00000000613	RPL13A (ENSCABG00000000617)	ENSCABG00000000628	SLC17A7 (ENSCABG00000000757)	PIH1D1 (ENSCABG00000000768)	ENSCABG00000000776	ENSCABG00000000791	ENSCABG00000000794	ENSCABG00000000795	ENSCABG00000000797	ENSCABG00000000801	PTH2 (ENSCABG00000000803)	ENSCABG00000000807 #22	ENSCABG00000000812	CD37 (ENSCABG00000000815)	ENSCABG00000000822	ENSCABG00000000825	ENSCABG00000000831	GYS1 (ENSCABG00000000840)	ENSCABG00000001135	RUVBL2 (ENSCABG00000001141)	NTF4 (ENSCABG00000001148)	ENSCABG00000001150	ENSCABG00000001154	SNRNP70 (ENSCABG00000001161)
Abingdon island giant tortoise	MODERN SPECIES	1428																KRAS (ENSCABG00000004592) #22	ETFRF1 (ENSCABG00000004589) #23	DNAI7 (ENSCABG00000004586) #24	ENSCABG00000004584 #25	SPX (ENSCABG00000004582)	GYS2 (ENSCABG00000004581)	ENSCABG00000004580
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	138	HSD17B14 (ENSGEVG00005016294)	ENSGEVG00005016325	ENSGEVG00005016341	RPL13A (ENSGEVG00005016372)	DHDH (ENSGEVG00005016429)	SLC17A7 (ENSGEVG00005016456)	PIH1D1 (ENSGEVG00005016578)	ENSGEVG00005010725	ENSGEVG00005010773	ENSGEVG00005010788	ENSGEVG00005010804	ENSGEVG00005010851	ENSGEVG00005011031	ENSGEVG00005011801	ENSGEVG00005011832	ENSGEVG00005011852 #22	ENSGEVG00005011899	ENSGEVG00005011952	BAX (ENSGEVG00005012003)	ENSGEVG00005012027	ENSGEVG00005012072	SNRNP70 (ENSGEVG00005012171)	LIN7B (ENSGEVG00005012203)	ENSGEVG00005012237	ENSGEVG00005012365	ENSGEVG00005012407	TRPM4 (ENSGEVG00005012560)	PNKP (ENSGEVG00005012999)	ENSGEVG00005013075	NOSIP (ENSGEVG00005013321)	ENSGEVG00005013356
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005002257 #8	CYB5R3 (ENSGEVG00005002279)	REP15 (ENSGEVG00005002300)	PPFIBP1 (ENSGEVG00005002317) ##7	BMAL2 (ENSGEVG00005002351)	STK38L (ENSGEVG00005002381)	ENSGEVG00005002399	MED21 (ENSGEVG00005002409)	TM7SF3 (ENSGEVG00005002419)	FGFR1OP2 (ENSGEVG00005002446) #9	INTS13 (ENSGEVG00005002456) #10	ITPR2 (ENSGEVG00005002806) #11	SSPN (ENSGEVG00005003444) #12	BHLHE41 (ENSGEVG00005003472) #13	RASSF8 (ENSGEVG00005003481) #14	KRAS (ENSGEVG00005003488) #22	ETFRF1 (ENSGEVG00005003501) #23	DNAI7 (ENSGEVG00005003509) #24	IRAG2 (ENSGEVG00005003531) #25	SPX (ENSGEVG00005003557)	GYS2 (ENSGEVG00005003564)	ENSGEVG00005003576	LDHB (ENSGEVG00005003582)	KCNJ8 (ENSGEVG00005003588)	ABCC9 (ENSGEVG00005003614)	CMAS (ENSGEVG00005003696)	ENSGEVG00005003723 #33	ST8SIA1 (ENSGEVG00005003765)	C2CD5 (ENSGEVG00005003996) #32	ETNK1 (ENSGEVG00005005331) #31	SOX5 (ENSGEVG00005005384) #30
Emydidae	ANCESTRAL SPECIES	5	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00540000073481	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	298											RPL13A (ENSTMTG00000010594)	DHDH (ENSTMTG00000010559)	SLC17A7 (ENSTMTG00000010503)	ENSTMTG00000010354	ENSTMTG00000010321	ENSTMTG00000010303 #22	ENSTMTG00000010285	ENSTMTG00000008691	ENSTMTG00000008678	GYS1 (ENSTMTG00000008657)
Three-toed box turtle	MODERN SPECIES	49	CYB5R3 (ENSTMTG00000022651)	REP15 (ENSTMTG00000022647)	PPFIBP1 (ENSTMTG00000022636) ##7	BMAL2 (ENSTMTG00000022632)	STK38L (ENSTMTG00000022628)	ENSTMTG00000022623	MED21 (ENSTMTG00000022622)	TM7SF3 (ENSTMTG00000022618)	FGFR1OP2 (ENSTMTG00000022615) #9	ENSTMTG00000022613	INTS13 (ENSTMTG00000022606) #10	ITPR2 (ENSTMTG00000015648) #11	SSPN (ENSTMTG00000014686) #12	ENSTMTG00000014670 #13	RASSF8 (ENSTMTG00000014655) #14	KRAS (ENSTMTG00000014635) #22	ETFRF1 (ENSTMTG00000014627) #23	DNAI7 (ENSTMTG00000014548) #24	IRAG2 (ENSTMTG00000014503) #25	SPX (ENSTMTG00000014479)	GYS2 (ENSTMTG00000014457)	ENSTMTG00000014437	LDHB (ENSTMTG00000014427)	KCNJ8 (ENSTMTG00000014419)	ABCC9 (ENSTMTG00000009590)	CMAS (ENSTMTG00000009171)	ENSTMTG00000004264 #33	ST8SIA1 (ENSTMTG00000004233)	C2CD5 (ENSTMTG00000004124) #32	ETNK1 (ENSTMTG00000004118) #31	SOX5 (ENSTMTG00000004075) #30
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1143	ENSCPBG00000014920	ENSCPBG00000014921	RPL13A (ENSCPBG00000014922)	ENSCPBG00000014931	SLC17A7 (ENSCPBG00000014951)	PIH1D1 (ENSCPBG00000014963)	ENSCPBG00000014969	ENSCPBG00000014973	ENSCPBG00000014975	ENSCPBG00000014977	ENSCPBG00000014979	ENSCPBG00000014984	ENSCPBG00000014986	ENSCPBG00000015005	PTH2 (ENSCPBG00000015091)	ENSCPBG00000015094 #22	ENSCPBG00000015099	ENSCPBG00000015101
painted turtle	MODERN SPECIES	15	REP15 (ENSCPBG00000025166)	PPFIBP1 (ENSCPBG00000023210) ##7	BMAL2 (ENSCPBG00000023135)	STK38L (ENSCPBG00000023125)	MED21 (ENSCPBG00000023117)	TM7SF3 (ENSCPBG00000023111)	FGFR1OP2 (ENSCPBG00000023106) #9	INTS13 (ENSCPBG00000023095) #10	ENSCPBG00000023088	ITPR2 (ENSCPBG00000009996) #11	SSPN (ENSCPBG00000009310) #12	BHLHE41 (ENSCPBG00000009309) #13	RASSF8 (ENSCPBG00000009305) #14	ENSCPBG00000009295	ENSCPBG00000009291	KRAS (ENSCPBG00000009289) #22	ETFRF1 (ENSCPBG00000009287) #23	DNAI7 (ENSCPBG00000009284) #24	IRAG2 (ENSCPBG00000009279) #25	SPX (ENSCPBG00000009274)	GYS2 (ENSCPBG00000009271)	ENSCPBG00000009269	LDHB (ENSCPBG00000009265)	KCNJ8 (ENSCPBG00000009263)	ABCC9 (ENSCPBG00000009242)	CMAS (ENSCPBG00000009236)	ENSCPBG00000009233 #33	ST8SIA1 (ENSCPBG00000009230)	C2CD5 (ENSCPBG00000009193) #32	ETNK1 (ENSCPBG00000009181) #31	ENSCPBG00000009175
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	917																ENSPSIG00000013936 #22	ENSPSIG00000013850
Chinese turtle	MODERN SPECIES	1391	BMAL2 (ENSPSIG00000009416)	STK38L (ENSPSIG00000008466)	ENSPSIG00000008183	MED21 (ENSPSIG00000008148)	TM7SF3 (ENSPSIG00000007228)	FGFR1OP2 (ENSPSIG00000006855) #9	INTS13 (ENSPSIG00000017830) #10	ENSPSIG00000017808	ENSPSIG00000017639 #11	ENSPSIG00000017522 #11	ENSPSIG00000017390	SSPN (ENSPSIG00000016959) #12	BHLHE41 (ENSPSIG00000016504) #13	RASSF8 (ENSPSIG00000016483) #14	ENSPSIG00000016355	KRAS (ENSPSIG00000015077) #22	ETFRF1 (ENSPSIG00000015062) #23	DNAI7 (ENSPSIG00000014365) #24	ENSPSIG00000014270 #25	SPX (ENSPSIG00000014186)	GYS2 (ENSPSIG00000009942)	ENSPSIG00000009808	LDHB (ENSPSIG00000007505)
Archosauria	ANCESTRAL SPECIES	4	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	64	BCAT2 (ENSCPRG00005016829) ##26	HSD17B14 (ENSCPRG00005016823)	PLEKHA4 (ENSCPRG00005016820)	ENSCPRG00005016815	NUCB1 (ENSCPRG00005016812)	TULP2 (ENSCPRG00005016777)	DHDH (ENSCPRG00005016764)	RPL13A (ENSCPRG00005016760)	ENSCPRG00005016751	SLC17A7 (ENSCPRG00005016730)	ENSCPRG00005016714	ENSCPRG00005016701	ENSCPRG00005016691	ENSCPRG00005016684	ENSCPRG00005016681	ENSCPRG00005016679 #22	DKKL1 (ENSCPRG00005016673)	TEAD2 (ENSCPRG00005016567)	CD37 (ENSCPRG00005016549)	ENSCPRG00005016546	BAX (ENSCPRG00005016545)	ENSCPRG00005016538	ENSCPRG00005016522	GYS1 (ENSCPRG00005016218)	RUVBL2 (ENSCPRG00005016152)	PNKP (ENSCPRG00005016147)	ENSCPRG00005016143	ENSCPRG00005016139	ENSCPRG00005016137	PPFIA3 (ENSCPRG00005016063)	LIN7B (ENSCPRG00005016044)
Australian saltwater crocodile	MODERN SPECIES	47	PECAM1 (ENSCPRG00005001389)	TEX2 (ENSCPRG00005001502)	ERN1 (ENSCPRG00005001569)	ENSCPRG00005001679	ZNF207 (ENSCPRG00005001692)	C17orf75 (ENSCPRG00005001731)	RHBDL3 (ENSCPRG00005001733)	RHOT1 (ENSCPRG00005001760)	ENSCPRG00005001843	ADAP2 (ENSCPRG00005001848)	TEFM (ENSCPRG00005001858)	ATAD5 (ENSCPRG00005001869)	CRLF3 (ENSCPRG00005001875)	SUZ12 (ENSCPRG00005001886)	UTP6 (ENSCPRG00005002001)	ENSCPRG00005002028 #22	ENSCPRG00005002043	RAB11FIP4 (ENSCPRG00005002063)	SCPEP1 (ENSCPRG00005002073)	COIL (ENSCPRG00005002085)	TRIM25 (ENSCPRG00005002100)	ENSCPRG00005002109	DGKE (ENSCPRG00005002113)	C17orf67 (ENSCPRG00005002118)	NOG (ENSCPRG00005002123)	ENSCPRG00005002125	PCTP (ENSCPRG00005002133)	TMEM100 (ENSCPRG00005002148)	MMD (ENSCPRG00005002159)	HLF (ENSCPRG00005002161)	STXBP4 (ENSCPRG00005002170)
Australian saltwater crocodile	MODERN SPECIES	49	TTLL1 (ENSCPRG00005003144)	PACSIN2 (ENSCPRG00005003149)	ARFGAP3 (ENSCPRG00005003154)	A4GALT (ENSCPRG00005003168)	CYB5R3 (ENSCPRG00005003173)	PPFIBP1 (ENSCPRG00005003349) ##7	STK38L (ENSCPRG00005004814)	MED21 (ENSCPRG00005004841)	TM7SF3 (ENSCPRG00005004854)	FGFR1OP2 (ENSCPRG00005004865) #9	INTS13 (ENSCPRG00005004880) #10	ITPR2 (ENSCPRG00005005714) #11	SSPN (ENSCPRG00005011416) #12	RASSF8 (ENSCPRG00005011432) #14	ENSCPRG00005011471	KRAS (ENSCPRG00005011484) #22	DNAI7 (ENSCPRG00005011487) #24	ETFRF1 (ENSCPRG00005011491) #23	IRAG2 (ENSCPRG00005011495) #25	SPX (ENSCPRG00005011505)	GYS2 (ENSCPRG00005011527)	LDHB (ENSCPRG00005011537)	ENSCPRG00005011538	KCNJ8 (ENSCPRG00005011543)	ABCC9 (ENSCPRG00005011566)	CMAS (ENSCPRG00005011614)	ENSCPRG00005011622 #33	ST8SIA1 (ENSCPRG00005011672)	C2CD5 (ENSCPRG00005011714) #32	ETNK1 (ENSCPRG00005011720) #31	SOX5 (ENSCPRG00005011849) #30
Aves	ANCESTRAL SPECIES	1	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
African ostrich	MODERN SPECIES	260										ITPR2 (ENSSCUG00000005165) #11	SSPN (ENSSCUG00000005159) #12	ENSSCUG00000005157	RASSF8 (ENSSCUG00000005155) #14	ENSSCUG00000005152	ETFRF1 (ENSSCUG00000005150) #23	KRAS (ENSSCUG00000005149) #22	DNAI7 (ENSSCUG00000005147) #24	IRAG2 (ENSSCUG00000005144) #25	SPX (ENSSCUG00000005142)	GYS2 (ENSSCUG00000005140)	LDHB (ENSSCUG00000005139)	KCNJ8 (ENSSCUG00000005138)	ABCC9 (ENSSCUG00000005127)	CMAS (ENSSCUG00000005124)	ENSSCUG00000005121 #33	ST8SIA1 (ENSSCUG00000005118)	C2CD5 (ENSSCUG00000005072) #32	ETNK1 (ENSSCUG00000005056) #31	SOX5 (ENSSCUG00000005050) #30	BCAT1 (ENSSCUG00000005048) #26
Neognathae	ANCESTRAL SPECIES	3	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Neognathae_c	ANCESTRAL SPECIES		ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00910000144343	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Golden eagle	MODERN SPECIES	8	ENSACCG00020016883 #19	FOXM1 (ENSACCG00020016881)	RHNO1 (ENSACCG00020016878)	TULP3 (ENSACCG00020016877)	TEAD4 (ENSACCG00020016876)	TSPAN9 (ENSACCG00020016871)	PARP11 (ENSACCG00020016868)	CRACR2A (ENSACCG00020016865)	PRMT8 (ENSACCG00020016863)	FGFR1OP2 (ENSACCG00020016860) #9	INTS13 (ENSACCG00020016853) #10	ITPR2 (ENSACCG00020014160) #11	SSPN (ENSACCG00020008052) #12	BHLHE41 (ENSACCG00020008046) #13	RASSF8 (ENSACCG00020008036) #14	KRAS (ENSACCG00020008023) #22	ETFRF1 (ENSACCG00020008012) #23	DNAI7 (ENSACCG00020007983) #24	IRAG2 (ENSACCG00020007953) #25	SPX (ENSACCG00020007933)	GYS2 (ENSACCG00020007913)	LDHB (ENSACCG00020007895)	KCNJ8 (ENSACCG00020007883)	ENSACCG00020007791	ENSACCG00020007731	CMAS (ENSACCG00020007715)	ENSACCG00020007699 #33	ST8SIA1 (ENSACCG00020007686)	C2CD5 (ENSACCG00020007378) #32	ETNK1 (ENSACCG00020006980) #31	SOX5 (ENSACCG00020006911) #30
Kakapo	MODERN SPECIES	20	ENSSHBG00005013622 #8	CYB5R3 (ENSSHBG00005013634)	PPFIBP1 (ENSSHBG00005013672) ##7	ENSSHBG00005013692	BMAL2 (ENSSHBG00005013707)	STK38L (ENSSHBG00005013754)	MED21 (ENSSHBG00005013777)	TM7SF3 (ENSSHBG00005013789)	FGFR1OP2 (ENSSHBG00005013801) #9	INTS13 (ENSSHBG00005013819) #10	ITPR2 (ENSSHBG00005013963) #11	SSPN (ENSSHBG00005014543) #12	BHLHE41 (ENSSHBG00005014564) #13	RASSF8 (ENSSHBG00005014578) #14	ENSSHBG00005014584	KRAS (ENSSHBG00005014594) #22	ETFRF1 (ENSSHBG00005014601) #23	DNAI7 (ENSSHBG00005014618) #24	IRAG2 (ENSSHBG00005014648) #25	SPX (ENSSHBG00005014662)	GYS2 (ENSSHBG00005014671)	LDHB (ENSSHBG00005014687)	KCNJ8 (ENSSHBG00005014701)	ABCC9 (ENSSHBG00005015154)	CMAS (ENSSHBG00005000671)	ENSSHBG00005001424 #33	ST8SIA1 (ENSSHBG00005001485)	C2CD5 (ENSSHBG00005001558) #32	ETNK1 (ENSSHBG00005001630) #31	SOX5 (ENSSHBG00005001677) #30	BCAT1 (ENSSHBG00005001829) #26
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00960000189646	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00940000158466	ENSGT00940000161161.b	ENSGT00960000188407	ENSGT00940000155319.h.c.b	ENSGT00960000189377	ENSGT00940000159401	ENSGT00940000153414.A	ENSGT00390000010229	ENSGT00940000157821	ENSGT00940000160821	ENSGT00940000163946	ENSGT00940000155180.b	ENSGT00960000190286
Great tit	MODERN SPECIES	10	CYB5R3 (ENSPMJG00000009034)	PPFIBP1 (ENSPMJG00000009077) ##7	REP15 (ENSPMJG00000009088)	BMAL2 (ENSPMJG00000009089)	STK38L (ENSPMJG00000009106)	MED21 (ENSPMJG00000009125)	TM7SF3 (ENSPMJG00000009126)	FGFR1OP2 (ENSPMJG00000009128) #9	INTS13 (ENSPMJG00000009129) #10	ITPR2 (ENSPMJG00000009161) #11	ENSPMJG00000009182	ENSPMJG00000009186	SSPN (ENSPMJG00000009189) #12	BHLHE41 (ENSPMJG00000009191) #13	RASSF8 (ENSPMJG00000009195) #14	KRAS (ENSPMJG00000009229) #22	ETFRF1 (ENSPMJG00000009230) #23	DNAI7 (ENSPMJG00000009232) #24	ENSPMJG00000009233	ARFGAP3 (ENSPMJG00000009234)	ENSPMJG00000009238	ENSPMJG00000009239	ENSPMJG00000009240	DYRK4 (ENSPMJG00000009242)	RAD51AP1 (ENSPMJG00000009247)	C12orf4 (ENSPMJG00000009248)	FGF6 (ENSPMJG00000009249)	FGF23 (ENSPMJG00000009251)	ENSPMJG00000009252	CCND2 (ENSPMJG00000009319)	ENSPMJG00000009332
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00960000189646	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00940000158466	ENSGT00940000161161.b	ENSGT00960000188407	ENSGT00940000155319.h.c.b	ENSGT00960000189377.b	ENSGT00960000189377.a	ENSGT00940000159401	ENSGT00940000153414.A	ENSGT00390000010229	ENSGT00940000157821	ENSGT00940000160821	ENSGT00940000163946	ENSGT00940000155180.b
Flycatcher	MODERN SPECIES	10	ENSFALG00000003959	ENSFALG00000023994	ENSFALG00000003955 ##7	ENSFALG00000015072	BMAL2 (ENSFALG00000003942)	STK38L (ENSFALG00000003933)	MED21 (ENSFALG00000003930)	TM7SF3 (ENSFALG00000003926)	FGFR1OP2 (ENSFALG00000028430) #9	INTS13 (ENSFALG00000003909) #10	ITPR2 (ENSFALG00000003887) #11	ENSFALG00000026688	SSPN (ENSFALG00000026325) #12	ENSFALG00000028108 #13	RASSF8 (ENSFALG00000003874) #14	KRAS (ENSFALG00000003867) #22	ETFRF1 (ENSFALG00000003861) #23	DNAI7 (ENSFALG00000025986) #24	ARFGAP3 (ENSFALG00000023723)	ENSFALG00000023011	ENSFALG00000026061	ENSFALG00000027101	CCND2 (ENSFALG00000025684)	ENSFALG00000027592	FGF23 (ENSFALG00000001945)	FGF6 (ENSFALG00000026218)	C12orf4 (ENSFALG00000001942)	RAD51AP1 (ENSFALG00000022882)	DYRK4 (ENSFALG00000001938)	ENSFALG00000025384	ENSFALG00000003668
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00960000189646	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00940000158466	ENSGT00940000161161.b	ENSGT00960000188407	ENSGT00940000155319.h.c.b	ENSGT00960000189377.b	ENSGT00960000189377.a	ENSGT00940000159401	ENSGT00940000153414.A	ENSGT00390000010229	ENSGT00940000157821	ENSGT00940000163946	ENSGT00940000160821	ENSGT00390000013224
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00960000189646	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00940000158466	ENSGT00940000161161.b	ENSGT00940000155319.h.c.b	ENSGT00960000189377.b	ENSGT00960000189377.a	ENSGT00940000159401	ENSGT00940000153414.A	ENSGT00390000010229	ENSGT00940000157821	ENSGT00940000160821	ENSGT00940000163946	ENSGT00940000155180.b	ENSGT00940000159863
Common canary	MODERN SPECIES	26	A4GALT (ENSSCAG00000009175)	ENSSCAG00000009188 #8	CYB5R3 (ENSSCAG00000009199)	REP15 (ENSSCAG00000009208)	PPFIBP1 (ENSSCAG00000009235) ##7	BMAL2 (ENSSCAG00000009281)	STK38L (ENSSCAG00000009318)	MED21 (ENSSCAG00000009334)	TM7SF3 (ENSSCAG00000009337)	FGFR1OP2 (ENSSCAG00000009342) #9	INTS13 (ENSSCAG00000009349) #10	ITPR2 (ENSSCAG00000009371) #11	ENSSCAG00000009405	SSPN (ENSSCAG00000009410) #12	RASSF8 (ENSSCAG00000009415) #14	KRAS (ENSSCAG00000009455) #22	ETFRF1 (ENSSCAG00000009461) #23	ENSSCAG00000009466 #24	ARFGAP3 (ENSSCAG00000009470)	ENSSCAG00000009483	ENSSCAG00000009484	ENSSCAG00000009486	ENSSCAG00000009496	RAD51AP1 (ENSSCAG00000009505)	C12orf4 (ENSSCAG00000009518)	FGF6 (ENSSCAG00000009527)	ENSSCAG00000009536	FGF23 (ENSSCAG00000009542)	CCND2 (ENSSCAG00000009545)	TRIM24 (ENSSCAG00000009594)	AKR1D1 (ENSSCAG00000009652)
Zebra finch	MODERN SPECIES	11	ENSTGUG00000021374	REP15 (ENSTGUG00000012162)	BMAL2 (ENSTGUG00000012163)	STK38L (ENSTGUG00000012169)	MED21 (ENSTGUG00000024373)	TM7SF3 (ENSTGUG00000012183)	FGFR1OP2 (ENSTGUG00000012184) #9	INTS13 (ENSTGUG00000012188) #10	ENSTGUG00000012195	ITPR2 (ENSTGUG00000012196) #11	ENSTGUG00000023761	SSPN (ENSTGUG00000025597) #12	BHLHE41 (ENSTGUG00000012230) #13	RASSF8 (ENSTGUG00000012234) #14	ENSTGUG00000027429	KRAS (ENSTGUG00000012235) #22	DNAI7 (ENSTGUG00000012243) #24	ARFGAP3 (ENSTGUG00000012247)	ENSTGUG00000023292	ENSTGUG00000025430	ENSTGUG00000021234	ENSTGUG00000012248	DYRK4 (ENSTGUG00000025343)	RAD51AP1 (ENSTGUG00000012251)	C12orf4 (ENSTGUG00000012261)	FGF6 (ENSTGUG00000012265)	ENSTGUG00000012270	FGF23 (ENSTGUG00000012268)	CCND2 (ENSTGUG00000012276)	ENSTGUG00000026287	TRIM24 (ENSTGUG00000012279)
Medium ground finch	MODERN SPECIES	117					BMAL2 (ENSGFOG00000014776)	STK38L (ENSGFOG00000014774)	MED21 (ENSGFOG00000014773)	TM7SF3 (ENSGFOG00000014772)	FGFR1OP2 (ENSGFOG00000014771) #9	INTS13 (ENSGFOG00000014765) #10	ENSGFOG00000014762	ITPR2 (ENSGFOG00000004602) #11	SSPN (ENSGFOG00000003396) #12	RASSF8 (ENSGFOG00000003381) #14	ENSGFOG00000003342	KRAS (ENSGFOG00000003324) #22	ETFRF1 (ENSGFOG00000003308) #23	ENSGFOG00000003283 #24	ARFGAP3 (ENSGFOG00000003249)	ENSGFOG00000003224	ENSGFOG00000003210	ENSGFOG00000003186	ENSGFOG00000003173	DYRK4 (ENSGFOG00000003048)	RAD51AP1 (ENSGFOG00000003010)	C12orf4 (ENSGFOG00000002973)	ENSGFOG00000002963	ENSGFOG00000002952	FGF23 (ENSGFOG00000002938)	TIGAR (ENSGFOG00000002919)	CCND2 (ENSGFOG00000002903)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00510000047981.c	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00990000206817	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Anatidae	ANCESTRAL SPECIES	8	ENSGT00510000047981.c	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00990000206817	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30	ENSGT00390000009532.A.d.a #26
Pink-footed goose	MODERN SPECIES	245										INTS13 (ENSABRG00000015817) #10	ITPR2 (ENSABRG00000016560) #11	SSPN (ENSABRG00000021629) #12	BHLHE41 (ENSABRG00000021631) #13	RASSF8 (ENSABRG00000021632) #14	ENSABRG00000021638	KRAS (ENSABRG00000021652) #22	ETFRF1 (ENSABRG00000021654) #23	DNAI7 (ENSABRG00000021656) #24	ENSABRG00000021665 #25	ENSABRG00000021680	SPX (ENSABRG00000021682)	GYS2 (ENSABRG00000021691)
Duck	MODERN SPECIES		REP15 (ENSAPLG00000001232)	ENSAPLG00000009279 ##7	ENSAPLG00000025790 ##7	BMAL2 (ENSAPLG00000008758)	STK38L (ENSAPLG00000008495)	MED21 (ENSAPLG00000017333)	ENSAPLG00000028939	TM7SF3 (ENSAPLG00000008163)	FGFR1OP2 (ENSAPLG00000007905) #9	INTS13 (ENSAPLG00000007349) #10	ITPR2 (ENSAPLG00000014956) #11	SSPN (ENSAPLG00000022486) #12	BHLHE41 (ENSAPLG00000023232) #13	RASSF8 (ENSAPLG00000024358) #14	ENSAPLG00000028893	KRAS (ENSAPLG00000015953) #22	ETFRF1 (ENSAPLG00000015974) #23	DNAI7 (ENSAPLG00000015977) #24	IRAG2 (ENSAPLG00000016181) #25	SPX (ENSAPLG00000016220)	GYS2 (ENSAPLG00000016252)	ENSAPLG00000026669	LDHB (ENSAPLG00000016403)	KCNJ8 (ENSAPLG00000016438)	ABCC9 (ENSAPLG00000016445)	CMAS (ENSAPLG00000016908)	ENSAPLG00000023735	ENSAPLG00000002767 #33	ST8SIA1 (ENSAPLG00000023759)	C2CD5 (ENSAPLG00000002815) #32	ETNK1 (ENSAPLG00000003084) #31
Phasianidae	ANCESTRAL SPECIES		ENSGT00950000182973.a.c.b	ENSGT00940000158466	ENSGT00510000047981.c	ENSGT00940000153962.b	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01100000263564.b	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Japanese quail	MODERN SPECIES		ENSCJPG00005015561	A4GALT (ENSCJPG00005015560)	CYB5R3 (ENSCJPG00005015559)	PPFIBP1 (ENSCJPG00005014207) ##7	BMAL2 (ENSCJPG00005014204)	STK38L (ENSCJPG00005014203)	MED21 (ENSCJPG00005014200)	TM7SF3 (ENSCJPG00005014199)	FGFR1OP2 (ENSCJPG00005014198) #9	INTS13 (ENSCJPG00005014197) #10	ENSCJPG00005014196	ITPR2 (ENSCJPG00005003455) #11	SSPN (ENSCJPG00005003282) #12	BHLHE41 (ENSCJPG00005003277) #13	RASSF8 (ENSCJPG00005003275) #14	KRAS (ENSCJPG00005003266) #22	ETFRF1 (ENSCJPG00005003264) #23	DNAI7 (ENSCJPG00005003259) #24	ENSCJPG00005003254 #25	SPX (ENSCJPG00005003246)	GYS2 (ENSCJPG00005003244)	LDHB (ENSCJPG00005003238)	KCNJ8 (ENSCJPG00005003236)	ABCC9 (ENSCJPG00005003226)	CMAS (ENSCJPG00005003221)	ENSCJPG00005003219 #33	C3AR1 (ENSCJPG00005003216)	ENSCJPG00005003211	ST8SIA1 (ENSCJPG00005003209)	C2CD5 (ENSCJPG00005003196) #32	ETNK1 (ENSCJPG00005003187) #31
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00510000047981.c	ENSGT00940000157452.s.a.c.b	ENSGT00530000063825.A.c #8	ENSGT00940000153962.b	ENSGT01050000244951.a.a ##7	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b #9	ENSGT00390000002793 #10	ENSGT00940000156039 #11	ENSGT00390000007747 #12	ENSGT00940000161014 #13	ENSGT00950000182839.B.a.a #14	ENSGT00940000155871 #22	ENSGT00390000001810 #23	ENSGT00390000004708 #24	ENSGT00530000063722.a #25	ENSGT00390000012501	ENSGT00390000018612.a.b	ENSGT00940000153525	ENSGT00990000203615.a.a.b	ENSGT00940000156680.b.b	ENSGT00390000004237	ENSGT00940000163137 #33	ENSGT01100000263564.b	ENSGT01030000234535.D	ENSGT00390000000212 #32	ENSGT00950000182939.b.a.b #31	ENSGT00940000156122 #30
Turkey	MODERN SPECIES		A4GALT (ENSMGAG00000015995)	ENSMGAG00000013753	ENSMGAG00000013754 #8	ENSMGAG00000013756	PPFIBP1 (ENSMGAG00000013758) ##7	BMAL2 (ENSMGAG00000013735)	STK38L (ENSMGAG00000013742)	MED21 (ENSMGAG00000013707)	TM7SF3 (ENSMGAG00000013710)	FGFR1OP2 (ENSMGAG00000013712) #9	INTS13 (ENSMGAG00000013714) #10	ITPR2 (ENSMGAG00000013722) #11	SSPN (ENSMGAG00000013734) #12	ENSMGAG00000013685 #14	ENSMGAG00000020387	KRAS (ENSMGAG00000013673) #22	ETFRF1 (ENSMGAG00000022020) #23	DNAI7 (ENSMGAG00000013688) #24	IRAG2 (ENSMGAG00000013692) #25	SPX (ENSMGAG00000013697)	ENSMGAG00000018603	GYS2 (ENSMGAG00000013698)	LDHB (ENSMGAG00000013702)	KCNJ8 (ENSMGAG00000013654)	ABCC9 (ENSMGAG00000013655)	CMAS (ENSMGAG00000013666)	ENSMGAG00000013669 #33	ENSMGAG00000013670	ST8SIA1 (ENSMGAG00000013671)	C2CD5 (ENSMGAG00000013649) #32	ETNK1 (ENSMGAG00000013647) #31
Chicken	MODERN SPECIES		ENSGALG00010013176	ENSGALG00010013167 #8	A4GALT (ENSGALG00010012867)	PPFIBP1 (ENSGALG00010013123) ##7	ARNTL2 (ENSGALG00010012985)	STK38L (ENSGALG00010012896)	MED21 (ENSGALG00010014861)	TM7SF3 (ENSGALG00010014839)	FGFR1OP2 (ENSGALG00010014748) #9	INTS13 (ENSGALG00010014728) #10	ENSGALG00010014697	ITPR2 (ENSGALG00010014477) #11	SSPN (ENSGALG00010014361) #12	BHLHE41 (ENSGALG00010014338) #13	RASSF8 (ENSGALG00010014328) #14	KRAS (ENSGALG00010014246) #22	ETFRF1 (ENSGALG00010014213) #23	DNAI7 (ENSGALG00010014154) #24	IRAG2 (ENSGALG00010014019) #25	SPX (ENSGALG00010013963)	GYS2 (ENSGALG00010013201)	LDHB (ENSGALG00010013184)	KCNJ8 (ENSGALG00010013173)	ABCC9 (ENSGALG00010013156)	CMAS (ENSGALG00010011573)	ENSGALG00010014870 #33	C3AR1L (ENSGALG00010014821)	ST8SIA1 (ENSGALG00010014713)	C2CD5 (ENSGALG00010014626) #32	ETNK1 (ENSGALG00010014515) #31	ENSGALG00010014391