Vertebrata ANCESTRAL SPECIES ENSGT00940000155328 #22 Gnathostomata ANCESTRAL SPECIES 20 ENSGT00530000064489 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000154404.a ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00950000182939.b.b ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685 ENSGT00940000159240 ENSGT00390000005534 ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b Euteleostomi ANCESTRAL SPECIES 19 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000154404.a ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00950000182939.b.b ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685 ENSGT00940000159240 ENSGT00390000005534 ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 Sarcopterygii ANCESTRAL SPECIES 21 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534 ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 Tetrapoda ANCESTRAL SPECIES 9 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534 ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Amniota ANCESTRAL SPECIES 20 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00940000175801 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Mammalia ANCESTRAL SPECIES 9 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00940000175801 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Theria ANCESTRAL SPECIES 8 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a #8 ENSGT00940000175801 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 Eutheria ANCESTRAL SPECIES 3 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a #8 ENSGT00940000175801 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a #8 ENSGT00940000175801 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Primates ANCESTRAL SPECIES ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Haplorrhini ANCESTRAL SPECIES ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Simiiformes ANCESTRAL SPECIES ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000157813 ENSGT00390000017491.s.a.a.e #8 ENSGT00440000038603.n #9 ENSGT00940000155817.a.a #10 ENSGT00390000000687.u #11 ENSGT00940000153272.a.b.o.b.a ENSGT00390000000687.v ##11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.q.b.a.a #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d.p #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523.b #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780.b ##33 ENSGT00940000162628 #32 ENSGT00940000158780.a #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Mas night monkey MODERN SPECIES 830 ENSANAG00000029343 #7 RPS13 (ENSANAG00000026703) #8 ENSANAG00000028185 #9 PLEKHA7 (ENSANAG00000015437) #10 C11orf58 (ENSANAG00000027455) #11 SOX6 (ENSANAG00000029702) #12 ENSANAG00000028387 #13 INSC (ENSANAG00000024858) #14 CALCB (ENSANAG00000026224) #15 ENSANAG00000028771 #16 CYP2R1 (ENSANAG00000029148) #17 ENSANAG00000029911 #18 PDE3B (ENSANAG00000021980) #19 ENSANAG00000024281 #20 COPB1 (ENSANAG00000022440) #21 RRAS2 (ENSANAG00000020797) #22 SPON1 (ENSANAG00000021897) #23 ENSANAG00000023814 #24 PTH (ENSANAG00000023657) #25 BTBD10 (ENSANAG00000019763) #26 BMAL1 (ENSANAG00000007619) #27 RASSF10 (ENSANAG00000016577) #28 TEAD1 (ENSANAG00000027729) #29 ENSANAG00000028040 #30 PARVA (ENSANAG00000034235) #31 ENSANAG00000037762 #32 MICAL2 (ENSANAG00000037113) #33 DKK3 (ENSANAG00000035069) #34 USP47 (ENSANAG00000033772) #35 GALNT18 (ENSANAG00000025486) #36 ZBED5 (ENSANAG00000015984) #37 Cebidae ANCESTRAL SPECIES ENSGT00940000157813 ENSGT00390000017491.s.a.a.e #8 ENSGT00440000038603.n #9 ENSGT00940000155817.a.a #10 ENSGT00390000000687.u #11 ENSGT00940000153272.a.b.o.b.a ENSGT00390000000687.v ##11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.q.b.a.a #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d.p #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523.b #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780.b ##33 ENSGT00940000162628 #32 ENSGT00940000158780.a #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155328.q.b.a.a #22 Capuchin MODERN SPECIES 39 RPS13 (ENSCCAG00000022959) #8 ENSCCAG00000031641 #9 PLEKHA7 (ENSCCAG00000030437) #10 ENSCCAG00000037894 #11 ENSCCAG00000035901 SOX6 (ENSCCAG00000034832) #12 INSC (ENSCCAG00000028591) #14 CALCB (ENSCCAG00000036279) #15 ENSCCAG00000022131 #15 CYP2R1 (ENSCCAG00000020089) #17 ENSCCAG00000035274 PDE3B (ENSCCAG00000006518) #19 PSMA1 (ENSCCAG00000032886) #20 COPB1 (ENSCCAG00000024190) #21 ENSCCAG00000031612 RRAS2 (ENSCCAG00000036972) #22 ENSCCAG00000022670 SPON1 (ENSCCAG00000035761) #23 ENSCCAG00000024494 #24 PTH (ENSCCAG00000032557) #25 BTBD10 (ENSCCAG00000035534) #26 ARNTL (ENSCCAG00000027938) #27 RASSF10 (ENSCCAG00000020233) #28 TEAD1 (ENSCCAG00000030647) #29 ENSCCAG00000030013 ENSCCAG00000011049 #30 PARVA (ENSCCAG00000026534) #31 ENSCCAG00000024252 #32 MICAL2 (ENSCCAG00000024846) #33 DKK3 (ENSCCAG00000023063) #34 USP47 (ENSCCAG00000036809) #35 Marmoset MODERN SPECIES 2 C11orf58 (ENSCJAG00000041748) ##11 ENSCJAG00000080150 SOX6 (ENSCJAG00000009643) #12 ENSCJAG00000084026 INSC (ENSCJAG00000009705) #14 CALCB (ENSCJAG00000072821) #15 ENSCJAG00000009757 ENSCJAG00000075982 CYP2R1 (ENSCJAG00000009776) #17 PDE3B (ENSCJAG00000009800) #19 ENSCJAG00000086676 ENSCJAG00000082675 PSMA1 (ENSCJAG00000009850) #20 COPB1 (ENSCJAG00000038149) #21 ENSCJAG00000046068 ENSCJAG00000040842 #22 SPON1 (ENSCJAG00000010055) #23 FAR1 (ENSCJAG00000010077) #24 ENSCJAG00000070220 ENSCJAG00000076330 PTH (ENSCJAG00000010117) #25 BTBD10 (ENSCJAG00000010121) #26 BMAL1 (ENSCJAG00000010162) ##27 RASSF10 (ENSCJAG00000085759) #28 ENSCJAG00000072498 TEAD1 (ENSCJAG00000010263) #29 ENSCJAG00000052611 PARVA (ENSCJAG00000010314) #31 ENSCJAG00000010368 ##33 DKK3 (ENSCJAG00000010506) #34 USP47 (ENSCJAG00000010537) #35 Platyrrhini ANCESTRAL SPECIES ENSGT00940000155328.q.b.a.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000155328.q.b.a.b ##22 Marmoset MODERN SPECIES 16 ENSCJAG00000085819 ENSCJAG00000080015 BTBD9 (ENSCJAG00000005701) ENSCJAG00000075287 ZFAND3 (ENSCJAG00000005670) ENSCJAG00000072880 MDGA1 (ENSCJAG00000005637) ENSCJAG00000073844 ENSCJAG00000075079 ENSCJAG00000005622 CMTR1 (ENSCJAG00000005567) RNF8 (ENSCJAG00000005529) TBC1D22B (ENSCJAG00000005473) ENSCJAG00000072085 TMEM217B (ENSCJAG00000061553) ENSCJAG00000022341 ##22 PIM1 (ENSCJAG00000072701) ENSCJAG00000074878 ENSCJAG00000079148 FGD2 (ENSCJAG00000005381) ENSCJAG00000005273 PI16 (ENSCJAG00000005267) C6orf89 (ENSCJAG00000009979) PPIL1 (ENSCJAG00000078975) CPNE5 (ENSCJAG00000016086) RAB44 (ENSCJAG00000016070) CDKN1A (ENSCJAG00000045298) ENSCJAG00000016062 STK38 (ENSCJAG00000016045) KCTD20 (ENSCJAG00000016033) ##26 ENSCJAG00000043415 Platyrrhini ANCESTRAL SPECIES ENSGT00940000155328.q.b.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000155328.q.b.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000155328.q.b.b ##22 Bolivian squirrel monkey MODERN SPECIES 42 PIK3C2A (ENSSBOG00000020550) RPS13 (ENSSBOG00000031967) #8 ENSSBOG00000029329 #9 PLEKHA7 (ENSSBOG00000035289) #10 C11orf58 (ENSSBOG00000024393) ##11 SOX6 (ENSSBOG00000032558) #12 INSC (ENSSBOG00000010393) #14 CALCB (ENSSBOG00000034921) #15 ENSSBOG00000032369 #15 CYP2R1 (ENSSBOG00000025157) #17 ENSSBOG00000020446 PDE3B (ENSSBOG00000022041) #19 ENSSBOG00000034107 #20 COPB1 (ENSSBOG00000034691) #21 ENSSBOG00000016009 RRAS2 (ENSSBOG00000031627) ##22 ENSSBOG00000014032 SPON1 (ENSSBOG00000033038) #23 ENSSBOG00000032346 #24 PTH (ENSSBOG00000031787) #25 ENSSBOG00000032795 #26 BMAL1 (ENSSBOG00000031375) #27 RASSF10 (ENSSBOG00000018129) #28 TEAD1 (ENSSBOG00000016687) #29 ENSSBOG00000014534 ENSSBOG00000024037 #30 ENSSBOG00000028604 PARVA (ENSSBOG00000022244) #31 ENSSBOG00000021582 ENSSBOG00000033370 #32 MICAL2 (ENSSBOG00000016986) #33 Marmoset MODERN SPECIES 68 ENSCJAG00000076980 ##22 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000162681 ENSGT00940000156775 ENSGT00390000007888.c.b.j.b ENSGT00390000004313 ENSGT00940000161009 ENSGT00940000158992 ENSGT00390000009312 ENSGT00940000158298 ENSGT00390000014679 ENSGT00940000159201 ENSGT00390000010210 ENSGT00940000157172 ENSGT00400000022349 ENSGT00940000157472 ENSGT00730000111479.b ENSGT00940000155328.q.a ##22 ENSGT00940000153394.c.a.h ENSGT00940000161251 ENSGT00390000000020.a ENSGT00940000162458 ENSGT00390000014270 ENSGT00940000153189.C ENSGT00940000156194 ENSGT00940000160379 ENSGT00940000159918.a.b ENSGT00910000144115.a.ob.b ENSGT00940000153544.a.h ENSGT00390000007975.b ##26 ENSGT00390000012893 ENSGT00940000162211 ENSGT00390000001176 Cebidae ANCESTRAL SPECIES 5 ENSGT00940000162681 ENSGT00940000156775 ENSGT00390000007888.c.b.j.b ENSGT00390000004313 ENSGT00940000161009 ENSGT00940000158992 ENSGT00390000009312 ENSGT00940000158298 ENSGT00390000014679 ENSGT00940000159201 ENSGT00390000010210 ENSGT00940000157172 ENSGT00400000022349 ENSGT00940000157472 ENSGT00730000111479.b ENSGT00940000155328.q.a ##22 ENSGT00940000153394.c.a.h ENSGT00940000161251 ENSGT00390000000020.a ENSGT00940000162458 ENSGT00390000014270 ENSGT00940000153189.C ENSGT00940000156194 ENSGT00940000160379 ENSGT00940000159918.a.b ENSGT00910000144115.a.ob.b ENSGT00940000153544.a.h ENSGT00390000007975.b ##26 ENSGT00390000012893 ENSGT00940000162211 ENSGT00390000001176 Cebidae_a ANCESTRAL SPECIES 25 ENSGT00940000162681 ENSGT00940000156775 ENSGT00390000007888.c.b.j.b ENSGT00390000004313 ENSGT00940000161009 ENSGT00940000158992 ENSGT00390000009312 ENSGT00940000158298 ENSGT00390000014679 ENSGT00940000159201 ENSGT00390000010210 ENSGT00940000157172 ENSGT00400000022349 ENSGT00940000157472 ENSGT00730000111479.b ENSGT00940000155328.q.a ##22 ENSGT00940000153394.c.a.h ENSGT00940000161251 ENSGT00390000000020.a.f.b ENSGT00940000162458 ENSGT00390000014270 ENSGT00940000153189.C ENSGT00940000156194 ENSGT00940000160379 ENSGT00940000159918.a.b ENSGT00910000144115.a.ob.b ENSGT00940000153544.a.h ENSGT00390000007975.b ##26 ENSGT00390000012893 ENSGT00940000162211 ENSGT00390000001176 Capuchin MODERN SPECIES 24 SGO1 (ENSCCAG00000023636) ENSCCAG00000033632 ZNF385D (ENSCCAG00000026103) UBE2E2 (ENSCCAG00000036099) UBE2E1 (ENSCCAG00000011415) NKIRAS1 (ENSCCAG00000023078) NR1D2 (ENSCCAG00000023054) ENSCCAG00000034286 ZFAND3 (ENSCCAG00000036971) MDGA1 (ENSCCAG00000017370) CCDC167 (ENSCCAG00000034679) CMTR1 (ENSCCAG00000033509) RNF8 (ENSCCAG00000026406) TBC1D22B (ENSCCAG00000034502) ENSCCAG00000028055 ENSCCAG00000036790 ##22 PIM1 (ENSCCAG00000029312) ENSCCAG00000032103 ENSCCAG00000025662 ENSCCAG00000036446 FGD2 (ENSCCAG00000021413) MTCH1 (ENSCCAG00000024180) PI16 (ENSCCAG00000032608) C6orf89 (ENSCCAG00000022020) PPIL1 (ENSCCAG00000036358) CPNE5 (ENSCCAG00000025295) RAB44 (ENSCCAG00000028656) CDKN1A (ENSCCAG00000025008) ENSCCAG00000035899 ENSCCAG00000032362 ENSCCAG00000032244 Bolivian squirrel monkey MODERN SPECIES 49 KCNK17 (ENSSBOG00000016836) KCNK5 (ENSSBOG00000033439) ENSSBOG00000029599 SAYSD1 (ENSSBOG00000032289) GLP1R (ENSSBOG00000026131) DNAH8 (ENSSBOG00000033654) GLO1 (ENSSBOG00000021885) BTBD9 (ENSSBOG00000015333) ZFAND3 (ENSSBOG00000031390) MDGA1 (ENSSBOG00000019569) CCDC167 (ENSSBOG00000025453) CMTR1 (ENSSBOG00000031128) RNF8 (ENSSBOG00000028831) TBC1D22B (ENSSBOG00000021572) TMEM217 (ENSSBOG00000034692) ENSSBOG00000032501 ##22 ENSSBOG00000027644 PIM1 (ENSSBOG00000020040) ENSSBOG00000032932 ENSSBOG00000035702 ENSSBOG00000031310 PI16 (ENSSBOG00000003322) ENSSBOG00000032887 ENSSBOG00000028233 CPNE5 (ENSSBOG00000026861) RAB44 (ENSSBOG00000020854) CDKN1A (ENSSBOG00000019456) SRSF3 (ENSSBOG00000022192) STK38 (ENSSBOG00000027316) KCTD20 (ENSSBOG00000021684) ##26 PXT1 (ENSSBOG00000001322) Mas night monkey MODERN SPECIES 1002 GLP1R (ENSANAG00000021865) ENSANAG00000005457 ENSANAG00000000923 ENSANAG00000023040 DNAH8 (ENSANAG00000024632) GLO1 (ENSANAG00000021701) BTBD9 (ENSANAG00000024240) ZFAND3 (ENSANAG00000023388) MDGA1 (ENSANAG00000036687) ENSANAG00000012309 CCDC167 (ENSANAG00000021207) CMTR1 (ENSANAG00000020879) RNF8 (ENSANAG00000032074) TBC1D22B (ENSANAG00000036225) TMEM217 (ENSANAG00000032409) ENSANAG00000025088 ##22 PIM1 (ENSANAG00000025153) ENSANAG00000024516 ENSANAG00000036110 ENSANAG00000007843 FGD2 (ENSANAG00000022493) MTCH1 (ENSANAG00000029509) PI16 (ENSANAG00000018843) C6orf89 (ENSANAG00000021310) PPIL1 (ENSANAG00000031774) CPNE5 (ENSANAG00000022331) Platyrrhini ANCESTRAL SPECIES ENSGT00940000155328.r ##22 Mas night monkey MODERN SPECIES 920 ENSANAG00000023448 ##22 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00910000147143 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Rhinopithecus ANCESTRAL SPECIES 256 ENSGT00940000153558.b.i.b.a.b ENSGT00950000183035.a.a ENSGT00950000182803.B.d.a.i.a ENSGT00940000156656 ENSGT00940000159460 ENSGT00390000008694.b.b.c.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT01050000244941.A.q.a.a ENSGT00950000182839.A.d #28 ENSGT00910000147143 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 Black snub-nosed monkey MODERN SPECIES 687 SOX6 (ENSRBIG00000029047) #12 INSC (ENSRBIG00000038579) #14 CALCB (ENSRBIG00000037886) #15 CALCA (ENSRBIG00000040435) CYP2R1 (ENSRBIG00000038224) #17 PDE3B (ENSRBIG00000033238) #19 PSMA1 (ENSRBIG00000037598) #20 COPB1 (ENSRBIG00000042522) #21 ENSRBIG00000025999 ENSRBIG00000002418 ENSRBIG00000037045 RRAS2 (ENSRBIG00000033953) #22 ENSRBIG00000029894 SPON1 (ENSRBIG00000026984) #23 FAR1 (ENSRBIG00000044909) #24 PTH (ENSRBIG00000021610) #25 BTBD10 (ENSRBIG00000029469) #26 BMAL1 (ENSRBIG00000032761) #27 ENSRBIG00000039246 RASSF10 (ENSRBIG00000023732) #28 ENSRBIG00000035810 TEAD1 (ENSRBIG00000038939) #29 PARVA (ENSRBIG00000030988) #31 ENSRBIG00000038610 #32 MICAL2 (ENSRBIG00000031181) #33 DKK3 (ENSRBIG00000007853) #34 USP47 (ENSRBIG00000029035) #35 Golden snub-nosed monkey MODERN SPECIES 2666 CALCA (ENSRROG00000038260) CYP2R1 (ENSRROG00000031651) #17 PDE3B (ENSRROG00000030993) #19 PSMA1 (ENSRROG00000037748) #20 COPB1 (ENSRROG00000035006) #21 ENSRROG00000040457 ENSRROG00000035326 RRAS2 (ENSRROG00000044127) #22 SPON1 (ENSRROG00000045521) #23 FAR1 (ENSRROG00000032752) #24 PTH (ENSRROG00000045148) #25 BTBD10 (ENSRROG00000009070) #26 BMAL1 (ENSRROG00000036134) #27 ENSRROG00000040484 ENSRROG00000029905 RASSF10 (ENSRROG00000026716) #28 ENSRROG00000029938 TEAD1 (ENSRROG00000038144) #29 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00910000147143 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Vervet Monkey MODERN SPECIES NUCB2 (ENSCSAG00000004802) PIK3C2A (ENSCSAG00000004784) ENSCSAG00000004762 #8 PLEKHA7 (ENSCSAG00000004758) #10 C11orf58 (ENSCSAG00000004755) #11 ENSCSAG00000019325 SOX6 (ENSCSAG00000004751) #12 INSC (ENSCSAG00000004745) #14 CALCB (ENSCSAG00000004739) #15 CALCA (ENSCSAG00000004733) CYP2R1 (ENSCSAG00000004727) #17 PDE3B (ENSCSAG00000004722) #19 ENSCSAG00000004718 #20 COPB1 (ENSCSAG00000004715) #21 ENSCSAG00000019326 RRAS2 (ENSCSAG00000004707) #22 SPON1 (ENSCSAG00000004699) #23 FAR1 (ENSCSAG00000004693) #24 PTH (ENSCSAG00000004688) #25 BTBD10 (ENSCSAG00000004684) #26 BMAL1 (ENSCSAG00000004681) #27 RASSF10 (ENSCSAG00000019327) #28 TEAD1 (ENSCSAG00000004676) #29 PARVA (ENSCSAG00000004674) #31 ENSCSAG00000004672 #32 MICAL2 (ENSCSAG00000004666) #33 DKK3 (ENSCSAG00000004664) #34 USP47 (ENSCSAG00000004651) #35 GALNT18 (ENSCSAG00000004622) #36 ZBED5 (ENSCSAG00000004621) #37 EIF4G2 (ENSCSAG00000004613) Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000157813 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00910000148600 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00390000009405.b.c.a.a.d.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT01050000244941.A.q.a.a ENSGT00950000182839.A.d #28 ENSGT00910000147143 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00740000115534.a.b.f.a.b.m.a ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 Cercopithecinae_b ANCESTRAL SPECIES 27 ENSGT00940000157813 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00910000148600 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00390000009405.b.c.a.a.d.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT01050000244941.A.q.a.a ENSGT00950000182839.A.d #28 ENSGT00910000147143 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00740000115534.a.b.f.a.b.m.a ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 Olive baboon MODERN SPECIES 3 PIK3C2A (ENSPANG00000015538) ENSPANG00000033142 #8 PLEKHA7 (ENSPANG00000018146) #10 C11orf58 (ENSPANG00000004515) #11 ENSPANG00000044173 ENSPANG00000013057 SOX6 (ENSPANG00000025558) #12 INSC (ENSPANG00000010410) #14 CALCA (ENSPANG00000038842) CYP2R1 (ENSPANG00000005224) #17 PDE3B (ENSPANG00000014364) #19 PSMA1 (ENSPANG00000016448) #20 COPB1 (ENSPANG00000019450) #21 ENSPANG00000002060 ENSPANG00000049552 RRAS2 (ENSPANG00000009252) #22 SPON1 (ENSPANG00000002502) #23 FAR1 (ENSPANG00000026208) #24 PTH (ENSPANG00000021901) #25 BTBD10 (ENSPANG00000010377) #26 BMAL1 (ENSPANG00000006538) #27 ENSPANG00000006030 RASSF10 (ENSPANG00000039259) #28 TEAD1 (ENSPANG00000007045) #29 ENSPANG00000014772 PARVA (ENSPANG00000012056) #31 MICAL2 (ENSPANG00000013189) #33 DKK3 (ENSPANG00000019481) #34 USP47 (ENSPANG00000025707) #35 ENSPANG00000041841 ENSPANG00000041769 Cercopithecinae_d ANCESTRAL SPECIES 99 ENSGT00940000157813 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00910000148600 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00390000009405.b.c.a.a.d.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00910000147143 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 Sooty mangabey MODERN SPECIES 235 PLEKHA7 (ENSCATG00000040434) #10 C11orf58 (ENSCATG00000045243) #11 ENSCATG00000031030 SOX6 (ENSCATG00000040489) #12 INSC (ENSCATG00000035904) #14 CALCB (ENSCATG00000041190) #15 CALCA (ENSCATG00000027244) ENSCATG00000042154 CYP2R1 (ENSCATG00000039518) #17 PDE3B (ENSCATG00000038221) #19 PSMA1 (ENSCATG00000014932) #20 COPB1 (ENSCATG00000040822) #21 ENSCATG00000005978 RRAS2 (ENSCATG00000043382) #22 SPON1 (ENSCATG00000031426) #23 FAR1 (ENSCATG00000039474) #24 PTH (ENSCATG00000011856) #25 BTBD10 (ENSCATG00000020038) #26 BMAL1 (ENSCATG00000014877) #27 ENSCATG00000031725 ENSCATG00000035301 RASSF10 (ENSCATG00000023676) #28 ENSCATG00000015452 TEAD1 (ENSCATG00000043730) #29 ENSCATG00000018831 PARVA (ENSCATG00000041795) #31 ENSCATG00000000895 #32 MICAL2 (ENSCATG00000045145) #33 DKK3 (ENSCATG00000029806) #34 Drill MODERN SPECIES 1308 ENSMLEG00000033673 SOX6 (ENSMLEG00000035320) #12 INSC (ENSMLEG00000035631) #14 CALCB (ENSMLEG00000037476) #15 CALCA (ENSMLEG00000044126) CYP2R1 (ENSMLEG00000023125) #17 PDE3B (ENSMLEG00000043892) #19 PSMA1 (ENSMLEG00000030594) #20 COPB1 (ENSMLEG00000043293) #21 ENSMLEG00000006364 ENSMLEG00000035246 RRAS2 (ENSMLEG00000040288) #22 SPON1 (ENSMLEG00000032226) #23 Macaca ANCESTRAL SPECIES 2 ENSGT00940000157813 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00910000148600 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00390000009405.b.c.a.a.d.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT01050000244941.A.q.a.a ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00740000115534.a.b.f.a.b.m.a ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 Pig-tailed macaque MODERN SPECIES 131 PIK3C2A (ENSMNEG00000031943) ENSMNEG00000043614 #8 PLEKHA7 (ENSMNEG00000042391) #10 C11orf58 (ENSMNEG00000039475) #11 ENSMNEG00000020819 SOX6 (ENSMNEG00000015482) #12 INSC (ENSMNEG00000041648) #14 CALCB (ENSMNEG00000033056) #15 CALCA (ENSMNEG00000041856) ENSMNEG00000015626 CYP2R1 (ENSMNEG00000036249) #17 PDE3B (ENSMNEG00000045013) #19 PSMA1 (ENSMNEG00000005235) #20 COPB1 (ENSMNEG00000041177) #21 ENSMNEG00000017091 RRAS2 (ENSMNEG00000040502) #22 SPON1 (ENSMNEG00000035429) #23 FAR1 (ENSMNEG00000027354) #24 PTH (ENSMNEG00000045093) #25 BTBD10 (ENSMNEG00000039532) #26 BMAL1 (ENSMNEG00000044126) #27 ENSMNEG00000028664 RASSF10 (ENSMNEG00000009578) #28 TEAD1 (ENSMNEG00000021469) #29 ENSMNEG00000040607 PARVA (ENSMNEG00000001559) #31 ENSMNEG00000038530 #32 MICAL2 (ENSMNEG00000035003) #33 DKK3 (ENSMNEG00000040813) #34 USP47 (ENSMNEG00000043434) #35 Macaca_a ANCESTRAL SPECIES 3 ENSGT00390000017491.s.a.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00960000191653 ENSGT00980000199842.D.c.b ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00390000009405.b.c.a.a.d.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00740000115534.a.b.f.a.b.m.a ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Rhesus MODERN SPECIES 5 RPS13 (ENSMMUG00000022547) #8 PLEKHA7 (ENSMMUG00000017628) #10 ENSMMUG00000060216 C14H11orf58 (ENSMMUG00000017626) #11 ENSMMUG00000064582 ENSMMUG00000055212 SOX6 (ENSMMUG00000002753) #12 INSC (ENSMMUG00000020246) #14 CALCB (ENSMMUG00000020245) #15 CALCA (ENSMMUG00000062674) CYP2R1 (ENSMMUG00000000761) #17 PDE3B (ENSMMUG00000000759) #19 PSMA1 (ENSMMUG00000016446) #20 COPB1 (ENSMMUG00000016444) #21 ENSMMUG00000060926 RRAS2 (ENSMMUG00000056680) #22 SPON1 (ENSMMUG00000021914) #23 FAR1 (ENSMMUG00000011990) #24 PTH (ENSMMUG00000054213) #25 BTBD10 (ENSMMUG00000009695) #26 ARNTL (ENSMMUG00000009690) #27 RASSF10 (ENSMMUG00000031015) #28 TEAD1 (ENSMMUG00000010875) #29 PARVA (ENSMMUG00000020956) #31 ENSMMUG00000040961 MICAL2 (ENSMMUG00000020953) #33 ENSMMUG00000058635 DKK3 (ENSMMUG00000022862) #34 USP47 (ENSMMUG00000022860) #35 GALNT18 (ENSMMUG00000004777) #36 ENSMMUG00000060286 Crab-eating macaque MODERN SPECIES 5 ENSMFAG00000059859 ENSMFAG00000065082 ENSMFAG00000051873 ENSMFAG00000060735 SOX6 (ENSMFAG00000026936) #12 ENSMFAG00000056897 INSC (ENSMFAG00000036736) #14 CALCB (ENSMFAG00000054288) #15 CALCA (ENSMFAG00000041791) CYP2R1 (ENSMFAG00000002337) #17 PDE3B (ENSMFAG00000043764) #19 ENSMFAG00000056009 PSMA1 (ENSMFAG00000036829) #20 COPB1 (ENSMFAG00000041022) #21 ENSMFAG00000030330 RRAS2 (ENSMFAG00000003904) #22 SPON1 (ENSMFAG00000045029) #23 FAR1 (ENSMFAG00000033108) #24 PTH (ENSMFAG00000032854) #25 BTBD10 (ENSMFAG00000000120) #26 ENSMFAG00000048535 ENSMFAG00000056904 BMAL1 (ENSMFAG00000034184) #27 ENSMFAG00000002071 TEAD1 (ENSMFAG00000031197) #29 PARVA (ENSMFAG00000042761) #31 ENSMFAG00000022828 MICAL2 (ENSMFAG00000003872) #33 ENSMFAG00000055053 DKK3 (ENSMFAG00000043096) #34 USP47 (ENSMFAG00000043486) #35 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00550000076414 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Gibbon MODERN SPECIES 5 RPS13 (ENSNLEG00000029985) #8 PLEKHA7 (ENSNLEG00000017721) #10 C11orf58 (ENSNLEG00000029419) #11 ENSNLEG00000031503 ENSNLEG00000028745 SOX6 (ENSNLEG00000017716) #12 INSC (ENSNLEG00000017712) #14 CALCB (ENSNLEG00000017711) #15 ENSNLEG00000035959 CYP2R1 (ENSNLEG00000017710) #17 ENSNLEG00000017708 #19 ENSNLEG00000035459 ENSNLEG00000017707 PSMA1 (ENSNLEG00000028235) #20 COPB1 (ENSNLEG00000017703) #21 RRAS2 (ENSNLEG00000017700) #22 SPON1 (ENSNLEG00000017696) #23 FAR1 (ENSNLEG00000017695) #24 PTH (ENSNLEG00000017694) #25 BTBD10 (ENSNLEG00000017691) #26 BMAL1 (ENSNLEG00000017674) #27 TEAD1 (ENSNLEG00000017672) #29 PARVA (ENSNLEG00000017668) #31 ENSNLEG00000017667 MICAL2 (ENSNLEG00000017665) #33 DKK3 (ENSNLEG00000017663) #34 USP47 (ENSNLEG00000017652) #35 ENSNLEG00000018179 GALNT18 (ENSNLEG00000017643) #36 ENSNLEG00000029070 ZBED5 (ENSNLEG00000017642) #37 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00550000076414 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Orangutan MODERN SPECIES 2 NCR3LG1 (ENSPPYG00000003453) NUCB2 (ENSPPYG00000003454) PIK3C2A (ENSPPYG00000003455) ENSPPYG00000036022 ##8 PLEKHA7 (ENSPPYG00000003457) #10 C11H11orf58 (ENSPPYG00000003458) #11 SOX6 (ENSPPYG00000003459) #12 INSC (ENSPPYG00000003460) #14 CALCB (ENSPPYG00000003461) #15 CALCA (ENSPPYG00000025911) ENSPPYG00000041260 CYP2R1 (ENSPPYG00000003463) #17 PDE3B (ENSPPYG00000003464) #19 PSMA1 (ENSPPYG00000003466) #20 COPB1 (ENSPPYG00000003467) #21 ENSPPYG00000025912 #22 SPON1 (ENSPPYG00000003469) #23 FAR1 (ENSPPYG00000003470) #24 PTH (ENSPPYG00000003471) #25 BTBD10 (ENSPPYG00000003472) #26 BMAL1 (ENSPPYG00000003473) #27 RASSF10 (ENSPPYG00000003474) #28 TEAD1 (ENSPPYG00000003475) #29 PARVA (ENSPPYG00000003476) #31 ENSPPYG00000003477 #33 DKK3 (ENSPPYG00000003478) #34 USP47 (ENSPPYG00000003479) #35 GALNT18 (ENSPPYG00000003481) #36 EIF4G2 (ENSPPYG00000003485) CTR9 (ENSPPYG00000003486) IRAG1 (ENSPPYG00000003487) Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00940000155328.o #22 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.w.a #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000017871.a ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.o #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00550000076414 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Pan ANCESTRAL SPECIES ENSGT00940000155328.o #22 Chimpanzee MODERN SPECIES 2 PIK3C2A (ENSPTRG00000003399) RPS13 (ENSPTRG00000044626) #8 PLEKHA7 (ENSPTRG00000003396) #10 C11H11orf58 (ENSPTRG00000044196) #11 ENSPTRG00000043419 SOX6 (ENSPTRG00000003393) #12 INSC (ENSPTRG00000003391) #14 CALCB (ENSPTRG00000003390) #15 CALCA (ENSPTRG00000003389) CYP2R1 (ENSPTRG00000003388) #17 ENSPTRG00000049147 PDE3B (ENSPTRG00000003386) #19 ENSPTRG00000050651 PSMA1 (ENSPTRG00000003385) #20 COPB1 (ENSPTRG00000003384) #21 RRAS2 (ENSPTRG00000003383) #22 SPON1 (ENSPTRG00000043466) #23 FAR1 (ENSPTRG00000024190) #24 PTH (ENSPTRG00000003379) #25 BTBD10 (ENSPTRG00000003377) #26 ARNTL (ENSPTRG00000003376) #27 RASSF10 (ENSPTRG00000047122) #28 TEAD1 (ENSPTRG00000039896) #29 PARVA (ENSPTRG00000003373) #31 ENSPTRG00000003371 #32 MICAL2 (ENSPTRG00000003370) #33 DKK3 (ENSPTRG00000003368) #34 USP47 (ENSPTRG00000003367) #35 ENSPTRG00000046226 GALNT18 (ENSPTRG00000003365) #36 ZBED5 (ENSPTRG00000040343) #37 Human MODERN SPECIES 2 KCNJ11 (ENSG00000187486) NCR3LG1 (ENSG00000188211) NUCB2 (ENSG00000070081) PIK3C2A (ENSG00000011405) RPS13 (ENSG00000110700) #8 PLEKHA7 (ENSG00000166689) #10 C11orf58 (ENSG00000110696) #11 SOX6 (ENSG00000110693) #12 INSC (ENSG00000188487) #14 CALCA (ENSG00000110680) CALCB (ENSG00000175868) #15 CYP2R1 (ENSG00000186104) #17 PDE3B (ENSG00000152270) #19 PSMA1 (ENSG00000129084) #20 COPB1 (ENSG00000129083) #21 RRAS2 (ENSG00000133818) #22 SPON1 (ENSG00000262655) #23 FAR1 (ENSG00000197601) #24 PTH (ENSG00000152266) #25 BTBD10 (ENSG00000148925) #26 BMAL1 (ENSG00000133794) #27 RASSF10 (ENSG00000189431) #28 TEAD1 (ENSG00000187079) #29 PARVA (ENSG00000197702) #31 MICAL2 (ENSG00000133816) #33 DKK3 (ENSG00000050165) #34 USP47 (ENSG00000170242) #35 CSNK2A3 (ENSG00000254598) GALNT18 (ENSG00000110328) #36 ZBED5 (ENSG00000236287) #37 EIF4G2 (ENSG00000110321) Homo/Pan/Gorilla group DUPLICATION Homo/Pan/Gorilla group ANCESTRAL SPECIES 20 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.w.a #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000017871.a ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.p.a #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00550000076414 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Gorilla MODERN SPECIES 2 NCR3LG1 (ENSGGOG00000022788) NUCB2 (ENSGGOG00000005914) PIK3C2A (ENSGGOG00000011040) RPS13 (ENSGGOG00000007450) #8 PLEKHA7 (ENSGGOG00000006435) #10 ENSGGOG00000022363 SOX6 (ENSGGOG00000010884) #12 INSC (ENSGGOG00000002992) #14 CALCB (ENSGGOG00000000799) #15 CALCA (ENSGGOG00000014148) CYP2R1 (ENSGGOG00000004022) #17 PDE3B (ENSGGOG00000006999) #19 ENSGGOG00000024577 ENSGGOG00000001416 #20 COPB1 (ENSGGOG00000001412) #21 RRAS2 (ENSGGOG00000004759) #22 SPON1 (ENSGGOG00000012110) #23 FAR1 (ENSGGOG00000001180) #24 PTH (ENSGGOG00000024281) #25 BTBD10 (ENSGGOG00000000246) #26 BMAL1 (ENSGGOG00000013211) #27 RASSF10 (ENSGGOG00000024816) #28 TEAD1 (ENSGGOG00000037572) #29 PARVA (ENSGGOG00000014652) #31 ENSGGOG00000013049 #32 MICAL2 (ENSGGOG00000013027) #33 DKK3 (ENSGGOG00000009557) #34 USP47 (ENSGGOG00000009540) #35 ENSGGOG00000023364 GALNT18 (ENSGGOG00000005614) #36 ENSGGOG00000037061 Homo/Pan group ANCESTRAL SPECIES ENSGT00940000155328.p.a #22 Pan ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.w.a #11 ENSGT00940000153272.a.b.o.b.a ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000017871.a ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.p.a #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.i #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00550000076414 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Bonobo MODERN SPECIES 2 NUCB2 (ENSPPAG00000041653) PIK3C2A (ENSPPAG00000039156) ENSPPAG00000039874 #8 PLEKHA7 (ENSPPAG00000041353) #10 C11orf58 (ENSPPAG00000035335) #11 ENSPPAG00000035221 SOX6 (ENSPPAG00000037103) #12 INSC (ENSPPAG00000039229) #14 CALCB (ENSPPAG00000039474) #15 CALCA (ENSPPAG00000040307) CYP2R1 (ENSPPAG00000042738) #17 PDE3B (ENSPPAG00000001811) #19 ENSPPAG00000026084 ENSPPAG00000009245 #20 COPB1 (ENSPPAG00000037818) #21 ENSPPAG00000042848 #22 SPON1 (ENSPPAG00000038730) #23 FAR1 (ENSPPAG00000032349) #24 PTH (ENSPPAG00000029173) #25 BTBD10 (ENSPPAG00000017421) #26 BMAL1 (ENSPPAG00000013788) #27 RASSF10 (ENSPPAG00000003028) #28 TEAD1 (ENSPPAG00000035086) #29 PARVA (ENSPPAG00000036535) #31 ENSPPAG00000028227 #32 MICAL2 (ENSPPAG00000035586) #33 DKK3 (ENSPPAG00000041882) #34 USP47 (ENSPPAG00000005387) #35 ENSPPAG00000000576 GALNT18 (ENSPPAG00000040594) #36 ZBED5 (ENSPPAG00000014950) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00390000002727 ENSGT00390000012620 ENSGT00940000154482.b.a ENSGT00390000010157.a ENSGT00390000014590 ENSGT00940000159218.b ENSGT00940000161912 ENSGT00940000154819.a.a ENSGT00390000003156.a.a.y.b ENSGT00390000001523 ENSGT00910000146948 ENSGT01060000248556.B.t ENSGT00940000156073 ENSGT00940000160740 ENSGT00940000154327.b.e.a ENSGT00940000155328.p.b #22 ENSGT00940000158798 ENSGT00530000063187.B.b ENSGT00530000063187.B.a ENSGT00390000004835 ENSGT00940000161304 ENSGT00940000159127 ENSGT00940000156988 ENSGT00730000111085.A.s.a ENSGT00530000063498.B ENSGT00390000009595.a ENSGT00940000154290.a ENSGT00940000154296.jb.a.f ENSGT00530000063273.a ENSGT00390000002443 ENSGT00940000159943 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00390000002727 ENSGT00390000012620 ENSGT00940000154482.b.a ENSGT00390000010157.a ENSGT00390000014590 ENSGT00940000159218.b ENSGT00940000161912 ENSGT00940000154819.a.a ENSGT00390000003156.a.a.y.b ENSGT00390000001523 ENSGT00910000146948 ENSGT01060000248556.B.t ENSGT00940000156073 ENSGT00940000160740 ENSGT00940000154327.b.e.a ENSGT00940000155328.p.b #22 ENSGT00940000158798 ENSGT00530000063187.B.b ENSGT00530000063187.B.a ENSGT00390000004835 ENSGT00940000161304 ENSGT00940000159127 ENSGT00940000156988 ENSGT00730000111085.A.s.a ENSGT00530000063498.B ENSGT00390000009595.a ENSGT00940000154290.a ENSGT00940000154296.jb.a.f ENSGT00530000063273.a ENSGT00390000002443 ENSGT00940000159943 Pan ANCESTRAL SPECIES ENSGT00390000002727 ENSGT00390000012620 ENSGT00940000154482.b.a ENSGT00390000010157.a ENSGT00390000014590 ENSGT00940000159218.b ENSGT00940000161912 ENSGT00940000154819.a.a ENSGT00390000003156.a.a.y.b ENSGT00390000001523 ENSGT00910000146948 ENSGT01060000248556.B.t ENSGT00940000156073 ENSGT00940000160740 ENSGT00940000154327.b.e.a ENSGT00940000155328.p.b #22 ENSGT00940000158798 ENSGT00530000063187.B.b ENSGT00530000063187.B.a.c ENSGT00390000004835 ENSGT00940000161304 ENSGT00940000159127 ENSGT00940000156988 ENSGT00730000111085.A.s.a ENSGT00530000063498.B ENSGT00390000009595.a ENSGT00940000154290.a ENSGT00390000013722.m.b ENSGT00940000163824.b.a ENSGT00940000167627 ENSGT00940000154296.jb.a.f.a Bonobo MODERN SPECIES ENSPPAG00000030037 LRRC42 (ENSPPAG00000036648) ENSPPAG00000030206 DIO1 (ENSPPAG00000041851) YIPF1 (ENSPPAG00000035941) NDC1 (ENSPPAG00000033261) GLIS1 (ENSPPAG00000031229) DMRTB1 (ENSPPAG00000041944) LRP8 (ENSPPAG00000041011) MAGOH (ENSPPAG00000029996) ENSPPAG00000021501 CZIB (ENSPPAG00000039454) CPT2 (ENSPPAG00000036277) SLC1A7 (ENSPPAG00000036765) PODN (ENSPPAG00000028170) ENSPPAG00000030500 #22 SCP2 (ENSPPAG00000042730) ECHDC2 (ENSPPAG00000033400) ZYG11A (ENSPPAG00000042441) ENSPPAG00000043780 #8 ENSPPAG00000034845 COA7 (ENSPPAG00000039694) SHISAL2A (ENSPPAG00000040768) GPX7 (ENSPPAG00000037651) TUT4 (ENSPPAG00000037653) PRPF38A (ENSPPAG00000030905) ORC1 (ENSPPAG00000036636) CC2D1B (ENSPPAG00000008764) ENSPPAG00000040111 ENSPPAG00000035741 ZFYVE9 (ENSPPAG00000029382) Chimpanzee MODERN SPECIES LRRC42 (ENSPTRG00000000763) IFT25 (ENSPTRG00000000762) DIO1 (ENSPTRG00000000761) ENSPTRG00000005405 YIPF1 (ENSPTRG00000000759) NDC1 (ENSPTRG00000000757) GLIS1 (ENSPTRG00000000756) DMRTB1 (ENSPTRG00000000755) LRP8 (ENSPTRG00000000754) MAGOH (ENSPTRG00000000753) ENSPTRG00000048664 CZIB (ENSPTRG00000000752) CPT2 (ENSPTRG00000000751) SLC1A7 (ENSPTRG00000000750) PODN (ENSPTRG00000000749) ENSPTRG00000048812 #22 SCP2 (ENSPTRG00000000748) ECHDC2 (ENSPTRG00000000747) ZYG11A (ENSPTRG00000030596) ENSPTRG00000051948 ##8 ZYG11B (ENSPTRG00000000746) COA7 (ENSPTRG00000000745) SHISAL2A (ENSPTRG00000000744) GPX7 (ENSPTRG00000000741) TUT4 (ENSPTRG00000000740) PRPF38A (ENSPTRG00000000739) ORC1 (ENSPTRG00000000738) CC2D1B (ENSPTRG00000000737) ENSPTRG00000048677 ENSPTRG00000048766 ZFYVE9 (ENSPTRG00000000736) Gorilla MODERN SPECIES ENSGGOG00000022020 LRRC42 (ENSGGOG00000010693) ENSGGOG00000010685 DIO1 (ENSGGOG00000015406) YIPF1 (ENSGGOG00000015399) NDC1 (ENSGGOG00000014677) GLIS1 (ENSGGOG00000009368) DMRTB1 (ENSGGOG00000002406) LRP8 (ENSGGOG00000004035) MAGOH (ENSGGOG00000007594) ENSGGOG00000041930 CZIB (ENSGGOG00000004027) CPT2 (ENSGGOG00000004024) SLC1A7 (ENSGGOG00000005646) PODN (ENSGGOG00000005637) ENSGGOG00000024745 #22 SCP2 (ENSGGOG00000011446) ECHDC2 (ENSGGOG00000009043) ZYG11A (ENSGGOG00000009035) ENSGGOG00000039792 ##8 ZYG11B (ENSGGOG00000026886) COA7 (ENSGGOG00000023299) SHISAL2A (ENSGGOG00000044016) GPX7 (ENSGGOG00000014661) ENSGGOG00000009886 PRPF38A (ENSGGOG00000003940) ORC1 (ENSGGOG00000003931) CC2D1B (ENSGGOG00000000187) ENSGGOG00000043641 ENSGGOG00000036930 ZFYVE9 (ENSGGOG00000012676) Tarsier MODERN SPECIES 6147 INSC (ENSTSYG00000010938) #14 CALCB (ENSTSYG00000002844) #15 CALCA (ENSTSYG00000037546) ENSTSYG00000028581 CYP2R1 (ENSTSYG00000005816) #17 PDE3B (ENSTSYG00000002819) #19 PSMA1 (ENSTSYG00000003869) #20 COPB1 (ENSTSYG00000003836) #21 RRAS2 (ENSTSYG00000030276) #22 SPON1 (ENSTSYG00000006292) #23 FAR1 (ENSTSYG00000003576) #24 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Lemuriformes ANCESTRAL SPECIES 16 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675.h.a Mouse lemur MODERN SPECIES 27 KCNJ11 (ENSMICG00000005520) NUCB2 (ENSMICG00000005512) ENSMICG00000037789 PIK3C2A (ENSMICG00000003718) ENSMICG00000031241 ##8 PLEKHA7 (ENSMICG00000003710) #10 ENSMICG00000027883 #11 SOX6 (ENSMICG00000027413) #12 INSC (ENSMICG00000008907) #14 CALCB (ENSMICG00000044384) #15 CALCA (ENSMICG00000036545) CYP2R1 (ENSMICG00000031499) #17 PDE3B (ENSMICG00000037786) #19 ENSMICG00000010934 #20 COPB1 (ENSMICG00000010919) #21 RRAS2 (ENSMICG00000026746) #22 ENSMICG00000044590 SPON1 (ENSMICG00000013787) #23 FAR1 (ENSMICG00000035920) #24 ENSMICG00000036333 PTH (ENSMICG00000042670) #25 BTBD10 (ENSMICG00000001232) #26 ENSMICG00000001229 #27 ENSMICG00000036945 TEAD1 (ENSMICG00000007178) #29 PARVA (ENSMICG00000003066) #31 ENSMICG00000003062 #32 MICAL2 (ENSMICG00000004280) #33 DKK3 (ENSMICG00000004271) #34 USP47 (ENSMICG00000028952) #35 GALNT18 (ENSMICG00000017614) #36 Lemuriformes_a ANCESTRAL SPECIES 24 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675.h.a Coquerels sifaka MODERN SPECIES 591 KCNJ11 (ENSPCOG00000009073) ENSPCOG00000015410 PIK3C2A (ENSPCOG00000009463) ENSPCOG00000024432 ##8 PLEKHA7 (ENSPCOG00000020850) #10 ENSPCOG00000016080 C11orf58 (ENSPCOG00000012109) #11 SOX6 (ENSPCOG00000008289) #12 INSC (ENSPCOG00000024807) #14 CALCB (ENSPCOG00000025246) #15 ENSPCOG00000014163 #15 CYP2R1 (ENSPCOG00000017738) #17 PDE3B (ENSPCOG00000022666) #19 ENSPCOG00000017306 #20 COPB1 (ENSPCOG00000022546) #21 RRAS2 (ENSPCOG00000016892) #22 SPON1 (ENSPCOG00000018088) #23 FAR1 (ENSPCOG00000027389) #24 PTH (ENSPCOG00000011541) #25 BTBD10 (ENSPCOG00000021543) #26 BMAL1 (ENSPCOG00000023193) #27 TEAD1 (ENSPCOG00000025108) #29 PARVA (ENSPCOG00000025574) #31 ENSPCOG00000022798 #32 MICAL2 (ENSPCOG00000022740) #33 ENSPCOG00000015120 DKK3 (ENSPCOG00000014673) #34 USP47 (ENSPCOG00000002132) #35 GALNT18 (ENSPCOG00000018132) #36 ZBED5 (ENSPCOG00000000863) #37 EIF4G2 (ENSPCOG00000025142) Greater bamboo lemur MODERN SPECIES 1296 RRAS2 (ENSPSMG00000001280) #22 SPON1 (ENSPSMG00000001222) #23 FAR1 (ENSPSMG00000001147) #24 Bushbaby MODERN SPECIES 116 ENSOGAG00000032142 NUCB2 (ENSOGAG00000006094) ENSOGAG00000028675 PIK3C2A (ENSOGAG00000002129) RPS13 (ENSOGAG00000002128) ##8 PLEKHA7 (ENSOGAG00000013719) #10 C11orf58 (ENSOGAG00000025335) #11 SOX6 (ENSOGAG00000005358) #12 INSC (ENSOGAG00000000628) #14 ENSOGAG00000009052 ENSOGAG00000017129 CYP2R1 (ENSOGAG00000006278) #17 PDE3B (ENSOGAG00000017127) #19 PSMA1 (ENSOGAG00000011622) #20 COPB1 (ENSOGAG00000011612) #21 RRAS2 (ENSOGAG00000027655) #22 FAR1 (ENSOGAG00000005064) #24 PTH (ENSOGAG00000000740) #25 BTBD10 (ENSOGAG00000000739) #26 BMAL1 (ENSOGAG00000000736) #27 ENSOGAG00000027834 RASSF10 (ENSOGAG00000030263) #28 TEAD1 (ENSOGAG00000011380) #29 PARVA (ENSOGAG00000003339) #31 ENSOGAG00000029945 #32 MICAL2 (ENSOGAG00000011909) #33 DKK3 (ENSOGAG00000005265) #34 USP47 (ENSOGAG00000005261) #35 GALNT18 (ENSOGAG00000013801) #36 ENSOGAG00000027912 CTR9 (ENSOGAG00000013884) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Glires ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Rodentia ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005022359 ENSSVLG00005022391 ENSSVLG00005022469 ENSSVLG00005022666 PLAAT5 (ENSSVLG00005022788) ENSSVLG00005022993 ENSSVLG00005023561 ENSSVLG00005023580 ENSSVLG00005023641 ENSSVLG00005023714 ENSSVLG00005023731 ENSSVLG00005023766 ENSSVLG00005023808 ENSSVLG00005023863 ENSSVLG00005024051 ENSSVLG00005024076 #22 ENSSVLG00005024264 SLC22A24 (ENSSVLG00005024838) ENSSVLG00005024877 ENSSVLG00005024903 SLC22A8 (ENSSVLG00005024944) SLC22A6 (ENSSVLG00005024995) ENSSVLG00005025007 CHRM1 (ENSSVLG00005025022) SLC3A2 (ENSSVLG00005025047) WDR74 (ENSSVLG00005004863) STX5 (ENSSVLG00005004935) NXF1 (ENSSVLG00005004975) TMEM223 (ENSSVLG00005005000) TMEM179B (ENSSVLG00005005020) TAF6L (ENSSVLG00005005050) Eurasian red squirrel MODERN SPECIES 7 ENSSVLG00005022762 ##30 ENSSVLG00005022792 ENSSVLG00005022824 ENSSVLG00005022877 ENSSVLG00005022904 ENSSVLG00005022980 ENSSVLG00005023063 ENSSVLG00005023087 RAB2B (ENSSVLG00005023112) ENSSVLG00005023127 ENSSVLG00005023143 ENSSVLG00005023220 ENSSVLG00005023357 ENSSVLG00005023417 ENSSVLG00005023451 ENSSVLG00005023495 #22 ENSSVLG00005023529 ENSSVLG00005023599 ENSSVLG00005023841 ENSSVLG00005024507 ENSSVLG00005024537 ENSSVLG00005024554 ENSSVLG00005024564 ENSSVLG00005024578 ENSSVLG00005024612 ENSSVLG00005024680 ENSSVLG00005024727 ENSSVLG00005024783 ENSSVLG00005024800 ENSSVLG00005024828 ENSSVLG00005024837 Eurasian red squirrel MODERN SPECIES 2 PIK3C2A (ENSSVLG00005007973) ENSSVLG00005008146 ##8 PLEKHA7 (ENSSVLG00005008253) #10 ENSSVLG00005008507 #11 SOX6 (ENSSVLG00005008583) #12 INSC (ENSSVLG00005008947) #14 CALCB (ENSSVLG00005009182) #15 CALCA (ENSSVLG00005009221) CYP2R1 (ENSSVLG00005009273) #17 PDE3B (ENSSVLG00005009340) #19 ENSSVLG00005009603 ENSSVLG00005009633 ENSSVLG00005009657 PSMA1 (ENSSVLG00005009698) #20 ENSSVLG00005009821 #21 ENSSVLG00005009856 #22 SPON1 (ENSSVLG00005009915) #23 FAR1 (ENSSVLG00005010034) #24 PTH (ENSSVLG00005010094) #25 ENSSVLG00005010129 #26 BMAL1 (ENSSVLG00005010226) #27 RASSF10 (ENSSVLG00005010782) #28 TEAD1 (ENSSVLG00005010836) #29 ENSSVLG00005010968 ENSSVLG00005011006 #31 ENSSVLG00005011151 #32 MICAL2 (ENSSVLG00005011268) #33 DKK3 (ENSSVLG00005011338) #34 USP47 (ENSSVLG00005011470) #35 GALNT18 (ENSSVLG00005012194) #36 ENSSVLG00005012265 Eurasian red squirrel MODERN SPECIES 8 WFDC1 (ENSSVLG00005025483) KCNG4 (ENSSVLG00005025497) ADAD2 (ENSSVLG00005025502) TAF1C (ENSSVLG00005025522) ENSSVLG00005025537 HSDL1 (ENSSVLG00005025542) MBTPS1 (ENSSVLG00005025551) SLC38A8 (ENSSVLG00005025564) NECAB2 (ENSSVLG00005025579) OSGIN1 (ENSSVLG00005025591) MLYCD (ENSSVLG00005025603) HSBP1 (ENSSVLG00005025608) CDH13 (ENSSVLG00005025632) MPHOSPH6 (ENSSVLG00005025646) HSD17B2 (ENSSVLG00005025655) ENSSVLG00005025661 #22 SDR42E1 (ENSSVLG00005025668) PLCG2 (ENSSVLG00005025677) ENSSVLG00005025705 GAN (ENSSVLG00005025710) BCO1 (ENSSVLG00005025719) ENSSVLG00005025763 C16orf46 (ENSSVLG00005014992) ENSSVLG00005015037 CENPN (ENSSVLG00005015134) CMC2 (ENSSVLG00005015210) CDYL2 (ENSSVLG00005015278) DYNLRB2 (ENSSVLG00005015349) ENSSVLG00005015446 WWOX (ENSSVLG00005015526) ENSSVLG00005015573 Marmotini ANCESTRAL SPECIES 22 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 3 ENSMMMG00000004134 PIK3C2A (ENSMMMG00000004019) ENSMMMG00000003997 ##8 PLEKHA7 (ENSMMMG00000003770) #10 C11orf58 (ENSMMMG00000003760) #11 SOX6 (ENSMMMG00000003398) #12 INSC (ENSMMMG00000003331) #14 CALCB (ENSMMMG00000003306) #15 CALCA (ENSMMMG00000003285) CYP2R1 (ENSMMMG00000003218) #17 PDE3B (ENSMMMG00000003034) #19 PSMA1 (ENSMMMG00000003002) #20 COPB1 (ENSMMMG00000002978) #21 ENSMMMG00000002961 ENSMMMG00000002957 #22 ENSMMMG00000002944 #22 ENSMMMG00000002936 SPON1 (ENSMMMG00000002900) #23 FAR1 (ENSMMMG00000002814) #24 PTH (ENSMMMG00000002796) #25 BTBD10 (ENSMMMG00000002760) #26 BMAL1 (ENSMMMG00000002502) #27 RASSF10 (ENSMMMG00000002476) #28 TEAD1 (ENSMMMG00000001794) #29 PARVA (ENSMMMG00000001624) #31 ENSMMMG00000001603 #32 MICAL2 (ENSMMMG00000001490) #33 DKK3 (ENSMMMG00000001456) #34 USP47 (ENSMMMG00000001225) #35 GALNT18 (ENSMMMG00000001161) #36 ENSMMMG00000001135 Alpin marmot MODERN SPECIES 3 ENSMMMG00000004174 ENSMMMG00000004134 PIK3C2A (ENSMMMG00000004019) ENSMMMG00000003997 ##8 PLEKHA7 (ENSMMMG00000003770) #10 C11orf58 (ENSMMMG00000003760) #11 SOX6 (ENSMMMG00000003398) #12 INSC (ENSMMMG00000003331) #14 CALCB (ENSMMMG00000003306) #15 CALCA (ENSMMMG00000003285) CYP2R1 (ENSMMMG00000003218) #17 PDE3B (ENSMMMG00000003034) #19 PSMA1 (ENSMMMG00000003002) #20 COPB1 (ENSMMMG00000002978) #21 ENSMMMG00000002961 ENSMMMG00000002957 #22 ENSMMMG00000002944 #22 ENSMMMG00000002936 SPON1 (ENSMMMG00000002900) #23 FAR1 (ENSMMMG00000002814) #24 PTH (ENSMMMG00000002796) #25 BTBD10 (ENSMMMG00000002760) #26 BMAL1 (ENSMMMG00000002502) #27 RASSF10 (ENSMMMG00000002476) #28 TEAD1 (ENSMMMG00000001794) #29 PARVA (ENSMMMG00000001624) #31 ENSMMMG00000001603 #32 MICAL2 (ENSMMMG00000001490) #33 DKK3 (ENSMMMG00000001456) #34 USP47 (ENSMMMG00000001225) #35 GALNT18 (ENSMMMG00000001161) #36 Marmotini_b ANCESTRAL SPECIES 61 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Squirrel MODERN SPECIES 128 NUCB2 (ENSSTOG00000001896) ENSSTOG00000031872 PIK3C2A (ENSSTOG00000009188) ENSSTOG00000031973 ENSSTOG00000008996 ##8 PLEKHA7 (ENSSTOG00000001423) #10 C11orf58 (ENSSTOG00000001419) #11 SOX6 (ENSSTOG00000013609) #12 INSC (ENSSTOG00000012376) #14 CALCB (ENSSTOG00000012372) #15 CALCA (ENSSTOG00000003844) CYP2R1 (ENSSTOG00000016403) #17 PDE3B (ENSSTOG00000016111) #19 PSMA1 (ENSSTOG00000006270) #20 COPB1 (ENSSTOG00000006213) #21 RRAS2 (ENSSTOG00000022169) #22 SPON1 (ENSSTOG00000029199) #23 FAR1 (ENSSTOG00000006190) #24 PTH (ENSSTOG00000026619) #25 BTBD10 (ENSSTOG00000005753) #26 BMAL1 (ENSSTOG00000022144) #27 RASSF10 (ENSSTOG00000028823) #28 TEAD1 (ENSSTOG00000013115) #29 PARVA (ENSSTOG00000004676) #31 ENSSTOG00000024040 #32 MICAL2 (ENSSTOG00000004626) #33 DKK3 (ENSSTOG00000004100) #34 USP47 (ENSSTOG00000004061) #35 GALNT18 (ENSSTOG00000016193) #36 ZBED5 (ENSSTOG00000013620) #37 EIF4G2 (ENSSTOG00000013612) Arctic ground squirrel MODERN SPECIES 161 RRAS2 (ENSUPAG00010015141) #22 SPON1 (ENSUPAG00010015160) #23 FAR1 (ENSUPAG00010015186) #24 PTH (ENSUPAG00010015241) #25 BTBD10 (ENSUPAG00010015250) #26 BMAL1 (ENSUPAG00010015313) #27 RASSF10 (ENSUPAG00010015667) #28 TEAD1 (ENSUPAG00010015679) #29 PARVA (ENSUPAG00010015787) #31 ENSUPAG00010015849 #32 MICAL2 (ENSUPAG00010015862) #33 DKK3 (ENSUPAG00010015990) #34 USP47 (ENSUPAG00010016001) #35 GALNT18 (ENSUPAG00010016098) #36 ZBED5 (ENSUPAG00010016123) #37 EIF4G2 (ENSUPAG00010016127) Hystricomorpha DUPLICATION Hystricomorpha ANCESTRAL SPECIES ENSGT00940000155328.w #22 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000034923 ENSHGLG00000001417 ENSHGLG00000046097 ENSHGLG00000000293 PRICKLE1 (ENSHGLG00000047115) ENSHGLG00000020234 ENSHGLG00000032813 ADAMTS20 (ENSHGLG00000004720) ENSHGLG00000041765 PUS7L (ENSHGLG00000004083) IRAK4 (ENSHGLG00000007796) TWF1 (ENSHGLG00000006813) TMEM117 (ENSHGLG00000004220) ENSHGLG00000046575 NELL2 (ENSHGLG00000007898) ENSHGLG00000003663 #22 ENSHGLG00000038069 ENSHGLG00000051000 ENSHGLG00000006512 ENSHGLG00000047418 ANO6 (ENSHGLG00000004355) ARID2 (ENSHGLG00000005387) SCAF11 (ENSHGLG00000050736) ENSHGLG00000018154 ENSHGLG00000004205 SLC38A1 (ENSHGLG00000003895) SLC38A2 (ENSHGLG00000011224) ENSHGLG00000037591 ENSHGLG00000042041 SLC38A4 (ENSHGLG00000009281) AMIGO2 (ENSHGLG00000007945) Naked mole-rat female MODERN SPECIES 10 ENSHGLG00000014280 ENSHGLG00000049492 ENSHGLG00000008691 ENSHGLG00000050080 ENSHGLG00000020333 ENSHGLG00000021211 ELTD1 (ENSHGLG00000010852) PTGFR (ENSHGLG00000037851) GIPC2 (ENSHGLG00000040596) ENSHGLG00000042164 DNAJB4 (ENSHGLG00000011595) ENSHGLG00000008415 NEXN (ENSHGLG00000004385) MIGA1 (ENSHGLG00000005514) USP33 (ENSHGLG00000006541) ENSHGLG00000036275 #22 ZZZ3 (ENSHGLG00000007618) AK5 (ENSHGLG00000008242) PIGK (ENSHGLG00000004661) ST6GALNAC5 (ENSHGLG00000004749) ENSHGLG00000034054 ENSHGLG00000045681 ENSHGLG00000034547 ST6GALNAC3 (ENSHGLG00000004799) ASB17 (ENSHGLG00000004852) MSH4 (ENSHGLG00000005307) ENSHGLG00000005990 ACADM (ENSHGLG00000007755) SLC44A5 (ENSHGLG00000008408) LHX8 (ENSHGLG00000004276) TYW3 (ENSHGLG00000046756) Naked mole-rat female MODERN SPECIES 3 LRRC19 (ENSHGLG00000040675) ENSHGLG00000032796 IFT74 (ENSHGLG00000007564) ENSHGLG00000037234 TEK (ENSHGLG00000017418) MOB3B (ENSHGLG00000005405) ENSHGLG00000020201 ENSHGLG00000008527 ENSHGLG00000039277 ENSHGLG00000039388 ENSHGLG00000033674 ENSHGLG00000045962 ENSHGLG00000045175 ENSHGLG00000041601 ENSHGLG00000041367 ENSHGLG00000021227 #22 ENSHGLG00000039697 Aco1 (ENSHGLG00000018922) RIGI (ENSHGLG00000016504) TOPORS (ENSHGLG00000006485) SMIM27 (ENSHGLG00000048743) NDUFB6 (ENSHGLG00000035848) TMEM215 (ENSHGLG00000047322) ENSHGLG00000017962 ##26 APTX (ENSHGLG00000015093) DNAJA1 (ENSHGLG00000006687) ENSHGLG00000009143 B4GALT1 (ENSHGLG00000048544) ENSHGLG00000039089 ENSHGLG00000005508 ENSHGLG00000005592 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000155328.w #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000155328.w #22 Degu MODERN SPECIES 64 TRIM27 (ENSODEG00000008147) ENSODEG00000008830 ENSODEG00000008110 GPX6 (ENSODEG00000008209) ENSODEG00000009823 #22 ENSODEG00000010310 ENSODEG00000008481 ZSCAN26 (ENSODEG00000007414) ENSODEG00000008300 ZKSCAN8 (ENSODEG00000006772) ENSODEG00000008174 ENSODEG00000019470 ENSODEG00000019545 ENSODEG00000019425 ENSODEG00000007819 ENSODEG00000019596 ENSODEG00000019548 ENSODEG00000019585 ENSODEG00000019469 ENSODEG00000019426 Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.g #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.x #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d.o.b #24 ENSGT00390000006367.d.o.a.b #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 24 ENSHGLG00000037844 PIK3C2A (ENSHGLG00000007454) ENSHGLG00000005727 PLEKHA7 (ENSHGLG00000004474) #10 ENSHGLG00000010951 #11 SOX6 (ENSHGLG00000013237) #12 ENSHGLG00000014554 ENSHGLG00000032536 INSC (ENSHGLG00000012231) #14 CALCB (ENSHGLG00000007698) #15 CALCA (ENSHGLG00000049679) CYP2R1 (ENSHGLG00000006296) #17 PDE3B (ENSHGLG00000004812) #19 PSMA1 (ENSHGLG00000008245) #20 COPB1 (ENSHGLG00000006967) #21 ENSHGLG00000005525 #22 SPON1 (ENSHGLG00000010146) #23 ENSHGLG00000004770 FAR1 (ENSHGLG00000009052) #24 ENSHGLG00000033619 ENSHGLG00000034622 PTH (ENSHGLG00000008594) #25 ENSHGLG00000017597 #26 BMAL1 (ENSHGLG00000011181) #27 RASSF10 (ENSHGLG00000033814) #28 TEAD1 (ENSHGLG00000010909) #29 PARVA (ENSHGLG00000010035) #31 ENSHGLG00000004319 #33 ENSHGLG00000037120 DKK3 (ENSHGLG00000004013) #34 USP47 (ENSHGLG00000016557) #35 Naked mole-rat female MODERN SPECIES 15 VSIG10 (ENSHGLG00000011958) ENSHGLG00000013581 RFC5 (ENSHGLG00000016340) ENSHGLG00000016549 KSR2 (ENSHGLG00000016442) ENSHGLG00000017873 ENSHGLG00000032275 NOS1 (ENSHGLG00000014607) FBXO21 (ENSHGLG00000017895) TESC (ENSHGLG00000018228) ENSHGLG00000009839 ENSHGLG00000009495 HRK (ENSHGLG00000032396) ENSHGLG00000011047 SPRING1 (ENSHGLG00000018586) ENSHGLG00000019986 #22 ENSHGLG00000049195 MED13L (ENSHGLG00000015908) ENSHGLG00000042829 ENSHGLG00000011364 ENSHGLG00000018712 TBX5 (ENSHGLG00000016202) RBM19 (ENSHGLG00000010899) LHX5 (ENSHGLG00000006590) SDSL (ENSHGLG00000007693) SDS (ENSHGLG00000009006) PLBD2 (ENSHGLG00000009980) SLC8B1 (ENSHGLG00000013801) TPCN1 (ENSHGLG00000012159) IQCD (ENSHGLG00000015686) RITA1 (ENSHGLG00000011650) Naked mole-rat female MODERN SPECIES 24 ENSHGLG00000019867 ENSHGLG00000039125 ENSHGLG00000038622 ENSHGLG00000047397 ENSHGLG00000049033 OR10G6 (ENSHGLG00000019951) OR10S1 (ENSHGLG00000020471) OR4D5 (ENSHGLG00000019833) OR8D4 (ENSHGLG00000019872) ENSHGLG00000037417 OR6M1 (ENSHGLG00000019993) ENSHGLG00000039034 ZNF202 (ENSHGLG00000000728) SCN3B (ENSHGLG00000038916) GRAMD1B (ENSHGLG00000001139) ENSHGLG00000032791 #22 CLMP (ENSHGLG00000001841) ENSHGLG00000001884 BSX (ENSHGLG00000042535) JHY (ENSHGLG00000001981) CRTAM (ENSHGLG00000002032) UBASH3B (ENSHGLG00000001126) ENSHGLG00000034719 ENSHGLG00000045413 ENSHGLG00000037002 SORL1 (ENSHGLG00000001265) SC5D (ENSHGLG00000044088) TECTA (ENSHGLG00000001489) TBCEL (ENSHGLG00000040222) GRIK4 (ENSHGLG00000001757) HYLS1 (ENSHGLG00000032168) Hystricomorpha_a ANCESTRAL SPECIES 47 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.g #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267.o #15 ENSGT00940000156267.p #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.x #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d.o.a.b #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Hystricomorpha_b ANCESTRAL SPECIES 5 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.g #11 ENSGT00940000171813 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267.o #15 ENSGT00940000156267.p #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.x #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d.o.a.b #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Degu DUPLICATION Degu MODERN SPECIES 108 NUCB2 (ENSODEG00000009138) PIK3C2A (ENSODEG00000009662) ENSODEG00000009296 ##8 PLEKHA7 (ENSODEG00000010004) #10 ENSODEG00000009867 SOX6 (ENSODEG00000008432) #12 INSC (ENSODEG00000008548) #14 ENSODEG00000009712 #15 ENSODEG00000019671 ENSODEG00000010275 #15 CYP2R1 (ENSODEG00000008305) #17 PDE3B (ENSODEG00000008884) #19 ENSODEG00000009349 #20 COPB1 (ENSODEG00000008339) #21 ENSODEG00000008175 ENSODEG00000010498 #22 SPON1 (ENSODEG00000010476) #23 FAR1 (ENSODEG00000008134) #24 PTH (ENSODEG00000009020) #25 BTBD10 (ENSODEG00000009711) #26 BMAL1 (ENSODEG00000008489) #27 ENSODEG00000007743 RASSF10 (ENSODEG00000020043) #28 TEAD1 (ENSODEG00000008592) #29 ENSODEG00000008361 PARVA (ENSODEG00000010068) #31 ENSODEG00000009261 MICAL2 (ENSODEG00000007747) #33 DKK3 (ENSODEG00000010578) #34 USP47 (ENSODEG00000009709) #35 ENSODEG00000007966 Degu MODERN SPECIES 91 OR1M1 (ENSODEG00000020403) ZNF317 (ENSODEG00000016488) ENSODEG00000017111 ENSODEG00000020461 ENSODEG00000016810 ENSODEG00000016729 ENSODEG00000017217 #22 ENSODEG00000016481 ENSODEG00000016968 ENSODEG00000017052 ENSODEG00000016813 ENSODEG00000017047 ENSODEG00000020442 ENSODEG00000016460 ENSODEG00000016654 ENSODEG00000016706 FBXL12 (ENSODEG00000016590) UBL5 (ENSODEG00000016745) ENSODEG00000017428 OLFM2 (ENSODEG00000016646) COL5A3 (ENSODEG00000016907) RDH8 (ENSODEG00000016686) Long-tailed chinchilla MODERN SPECIES 121 KCNJ11 (ENSCLAG00000018089) NUCB2 (ENSCLAG00000015316) PIK3C2A (ENSCLAG00000016983) ENSCLAG00000017194 ##8 PLEKHA7 (ENSCLAG00000017010) #10 C11orf58 (ENSCLAG00000016801) #11 ENSCLAG00000016704 SOX6 (ENSCLAG00000016824) #12 INSC (ENSCLAG00000017184) #14 ENSCLAG00000017178 #15 ENSCLAG00000016987 #15 CYP2R1 (ENSCLAG00000016825) #17 PDE3B (ENSCLAG00000016912) #19 PSMA1 (ENSCLAG00000016167) #20 COPB1 (ENSCLAG00000015805) #21 RRAS2 (ENSCLAG00000017168) #22 ENSCLAG00000016764 SPON1 (ENSCLAG00000017261) #23 ENSCLAG00000017019 #24 PTH (ENSCLAG00000017158) #25 BTBD10 (ENSCLAG00000017057) #26 BMAL1 (ENSCLAG00000017239) #27 RASSF10 (ENSCLAG00000018114) #28 TEAD1 (ENSCLAG00000016810) #29 PARVA (ENSCLAG00000015783) #31 ENSCLAG00000017336 #32 MICAL2 (ENSCLAG00000016778) #33 DKK3 (ENSCLAG00000017171) #34 USP47 (ENSCLAG00000016904) #35 GALNT18 (ENSCLAG00000016928) #36 ZBED5 (ENSCLAG00000017987) #37 Guinea pig MODERN SPECIES 67 ABCC8 (ENSCPOG00000001255) KCNJ11 (ENSCPOG00000004142) NUCB2 (ENSCPOG00000023342) PIK3C2A (ENSCPOG00000000024) RPS13 (ENSCPOG00000000023) ##8 PLEKHA7 (ENSCPOG00000006974) #10 C11orf58 (ENSCPOG00000038571) #11 SOX6 (ENSCPOG00000012090) #12 INSC (ENSCPOG00000009748) #14 ENSCPOG00000034508 #15 ENSCPOG00000009939 #15 CYP2R1 (ENSCPOG00000015305) #17 PDE3B (ENSCPOG00000014511) #19 PSMA1 (ENSCPOG00000015226) #20 COPB1 (ENSCPOG00000015221) #21 RRAS2 (ENSCPOG00000033943) #22 SPON1 (ENSCPOG00000001095) #23 ENSCPOG00000002654 #24 PTH (ENSCPOG00000003894) #25 ENSCPOG00000024984 #26 BMAL1 (ENSCPOG00000008795) #27 RASSF10 (ENSCPOG00000003185) #28 TEAD1 (ENSCPOG00000001830) #29 ENSCPOG00000032772 PARVA (ENSCPOG00000003322) #31 ENSCPOG00000003851 #32 MICAL2 (ENSCPOG00000003493) #33 DKK3 (ENSCPOG00000006479) #34 USP47 (ENSCPOG00000006461) #35 GALNT18 (ENSCPOG00000006859) #36 ZBED5 (ENSCPOG00000031247) #37 Rodentia_B ANCESTRAL SPECIES 5 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Kangaroo rat MODERN SPECIES 501 Ush1c (ENSDORG00000009605) Abcc8 (ENSDORG00000009602) Nucb2 (ENSDORG00000009599) Pik3c2a (ENSDORG00000002510) Rps13 (ENSDORG00000002507) ##8 Plekha7 (ENSDORG00000013868) #10 1110004F10Rik (ENSDORG00000029283) #11 Sox6 (ENSDORG00000013073) #12 Insc (ENSDORG00000015511) #14 Calcb (ENSDORG00000015509) #15 ENSDORG00000007871 #15 Cyp2r1 (ENSDORG00000001470) #17 Pde3b (ENSDORG00000016029) #19 Psma1 (ENSDORG00000009494) #20 Copb1 (ENSDORG00000001806) #21 Rras2 (ENSDORG00000028482) #22 Spon1 (ENSDORG00000003471) #23 Far1 (ENSDORG00000004485) #24 Myomorpha ANCESTRAL SPECIES 13 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Muroidea ANCESTRAL SPECIES 59 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Muroidea_A ANCESTRAL SPECIES ENSGT00940000157381 ENSGT00940000163348.e.d ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Murinae ANCESTRAL SPECIES ENSGT00950000183198.c.a.b.a.b ENSGT00940000157381 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Mus ANCESTRAL SPECIES ENSGT00950000183198.c.a.b.a.b ENSGT00940000157381 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Mus_A ANCESTRAL SPECIES 1 ENSGT00950000183198.c.a.b.a.b ENSGT00940000157381 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.s #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Mus_B ANCESTRAL SPECIES ENSGT00950000183198.c.a.b.a.b ENSGT00940000157381 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.s #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Mouse MODERN SPECIES 16 Rps15a (ENSMUSG00000008683) Xylt1 (ENSMUSG00000030657) Nucb2 (ENSMUSG00000030659) Pik3c2a (ENSMUSG00000030660) Rps13 (ENSMUSG00000090862) ##8 Plekha7 (ENSMUSG00000045659) #10 1110004F10Rik (ENSMUSG00000030663) #11 Sox6 (ENSMUSG00000051910) #12 Insc (ENSMUSG00000048782) #14 Calcb (ENSMUSG00000030666) #15 Calca (ENSMUSG00000030669) Cyp2r1 (ENSMUSG00000030670) #17 Pde3b (ENSMUSG00000030671) #19 Psma1 (ENSMUSG00000030751) #20 Copb1 (ENSMUSG00000030754) #21 Rras2 (ENSMUSG00000055723) #22 Spon1 (ENSMUSG00000038156) #23 Far1 (ENSMUSG00000030759) #24 Pth (ENSMUSG00000059077) #25 Btbd10 (ENSMUSG00000038187) #26 Arntl (ENSMUSG00000055116) #27 Rassf10 (ENSMUSG00000098132) #28 Tead1 (ENSMUSG00000055320) #29 Parva (ENSMUSG00000030770) #31 Mical2 (ENSMUSG00000038244) #33 Dkk3 (ENSMUSG00000030772) #34 Usp47 (ENSMUSG00000059263) #35 Galnt18 (ENSMUSG00000038296) #36 Eif4g2 (ENSMUSG00000005610) Ctr9 (ENSMUSG00000005609) Irag1 (ENSMUSG00000005611) Mus_C ANCESTRAL SPECIES 14 ENSGT00950000183198.c.a.b.a.b ENSGT00940000157381 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00960000193118 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a.s #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 spretus MODERN SPECIES 16 MGP_SPRETEiJ_G0031475 Xylt1 (MGP_SPRETEiJ_G0031474) Nucb2 (MGP_SPRETEiJ_G0031473) Pik3c2a (MGP_SPRETEiJ_G0031472) Rps13 (MGP_SPRETEiJ_G0031471) ##8 Plekha7 (MGP_SPRETEiJ_G0031470) #10 MGP_SPRETEiJ_G0031469 #11 Sox6 (MGP_SPRETEiJ_G0031468) #12 Insc (MGP_SPRETEiJ_G0031467) #14 Calcb (MGP_SPRETEiJ_G0031466) #15 Calca (MGP_SPRETEiJ_G0031465) Cyp2r1 (MGP_SPRETEiJ_G0031464) #17 Pde3b (MGP_SPRETEiJ_G0031463) #19 Psma1 (MGP_SPRETEiJ_G0031462) #20 Copb1 (MGP_SPRETEiJ_G0031461) #21 Rras2 (MGP_SPRETEiJ_G0031460) #22 Spon1 (MGP_SPRETEiJ_G0031459) #23 MGP_SPRETEiJ_G0031458 Far1 (MGP_SPRETEiJ_G0031457) #24 Pth (MGP_SPRETEiJ_G0031456) #25 Btbd10 (MGP_SPRETEiJ_G0031455) #26 Arntl (MGP_SPRETEiJ_G0031454) #27 Rassf10 (MGP_SPRETEiJ_G0031453) #28 Tead1 (MGP_SPRETEiJ_G0031452) #29 Parva (MGP_SPRETEiJ_G0031451) #31 MGP_SPRETEiJ_G0031450 #32 Mical2 (MGP_SPRETEiJ_G0031449) #33 Dkk3 (MGP_SPRETEiJ_G0031448) #34 Usp47 (MGP_SPRETEiJ_G0031447) #35 Galnt18 (MGP_SPRETEiJ_G0031446) #36 Eif4g2 (MGP_SPRETEiJ_G0031445) Steppe mouse MODERN SPECIES 3369 Insc (ENSMSIG00000028853) #14 Calcb (ENSMSIG00000028843) #15 ENSMSIG00000028838 Cyp2r1 (ENSMSIG00000028834) #17 Pde3b (ENSMSIG00000028820) #19 Psma1 (ENSMSIG00000028812) #20 Copb1 (ENSMSIG00000028801) #21 Rras2 (ENSMSIG00000028796) #22 Spon1 (ENSMSIG00000028779) #23 ENSMSIG00000028778 ENSMSIG00000028777 Far1 (ENSMSIG00000028764) #24 ENSMSIG00000028759 Pth (ENSMSIG00000028748) #25 Btbd10 (ENSMSIG00000028709) #26 Arntl (ENSMSIG00000028665) #27 Rassf10 (ENSMSIG00000028654) #28 ENSMSIG00000028653 Tead1 (ENSMSIG00000028550) #29 Parva (ENSMSIG00000028522) #31 ENSMSIG00000028511 #32 Mical2 (ENSMSIG00000028461) #33 Dkk3 (ENSMSIG00000028428) #34 Ryukyu mouse MODERN SPECIES 16 MGP_CAROLIEiJ_G0030360 Xylt1 (MGP_CAROLIEiJ_G0030359) Nucb2 (MGP_CAROLIEiJ_G0030358) MGP_CAROLIEiJ_G0030357 Rps13 (MGP_CAROLIEiJ_G0030356) ##8 Plekha7 (MGP_CAROLIEiJ_G0030355) #10 1110004F10Rik (MGP_CAROLIEiJ_G0030354) #11 Sox6 (MGP_CAROLIEiJ_G0030353) #12 Insc (MGP_CAROLIEiJ_G0030352) #14 Calcb (MGP_CAROLIEiJ_G0030351) #15 Calca (MGP_CAROLIEiJ_G0030350) Cyp2r1 (MGP_CAROLIEiJ_G0030349) #17 Pde3b (MGP_CAROLIEiJ_G0030348) #19 Psma1 (MGP_CAROLIEiJ_G0030347) #20 Copb1 (MGP_CAROLIEiJ_G0030346) #21 Rras2 (MGP_CAROLIEiJ_G0030345) #22 Spon1 (MGP_CAROLIEiJ_G0030344) #23 MGP_CAROLIEiJ_G0030343 MGP_CAROLIEiJ_G0030342 #24 Pth (MGP_CAROLIEiJ_G0030341) #25 Btbd10 (MGP_CAROLIEiJ_G0030340) #26 Arntl (MGP_CAROLIEiJ_G0030339) #27 Rassf10 (MGP_CAROLIEiJ_G0030338) #28 Tead1 (MGP_CAROLIEiJ_G0030337) #29 Parva (MGP_CAROLIEiJ_G0030336) #31 MGP_CAROLIEiJ_G0030335 #32 Mical2 (MGP_CAROLIEiJ_G0030334) #33 Dkk3 (MGP_CAROLIEiJ_G0030333) #34 Usp47 (MGP_CAROLIEiJ_G0030332) #35 Galnt18 (MGP_CAROLIEiJ_G0030331) #36 MGP_CAROLIEiJ_G0030330 Shrew mouse MODERN SPECIES Rps15a (MGP_PahariEiJ_G0013571) Xylt1 (MGP_PahariEiJ_G0013570) Nucb2 (MGP_PahariEiJ_G0013569) Pik3c2a (MGP_PahariEiJ_G0013568) Rps13 (MGP_PahariEiJ_G0013567) ##8 Plekha7 (MGP_PahariEiJ_G0013566) #10 1110004F10Rik (MGP_PahariEiJ_G0013565) #11 Sox6 (MGP_PahariEiJ_G0013564) #12 Insc (MGP_PahariEiJ_G0013563) #14 Calcb (MGP_PahariEiJ_G0013562) #15 Calca (MGP_PahariEiJ_G0013561) Cyp2r1 (MGP_PahariEiJ_G0013560) #17 Pde3b (MGP_PahariEiJ_G0013559) #19 Psma1 (MGP_PahariEiJ_G0013558) #20 Copb1 (MGP_PahariEiJ_G0013557) #21 Rras2 (MGP_PahariEiJ_G0013556) #22 Spon1 (MGP_PahariEiJ_G0013555) #23 Far1 (MGP_PahariEiJ_G0013554) #24 Pth (MGP_PahariEiJ_G0013553) #25 Btbd10 (MGP_PahariEiJ_G0013552) #26 Arntl (MGP_PahariEiJ_G0013551) #27 Rassf10 (MGP_PahariEiJ_G0013550) #28 Tead1 (MGP_PahariEiJ_G0013549) #29 Parva (MGP_PahariEiJ_G0013548) #31 MGP_PahariEiJ_G0013547 #32 Mical2 (MGP_PahariEiJ_G0013546) #33 Dkk3 (MGP_PahariEiJ_G0013545) #34 Usp47 (MGP_PahariEiJ_G0013544) #35 Galnt18 (MGP_PahariEiJ_G0013543) #36 Eif4g2 (MGP_PahariEiJ_G0013542) Ctr9 (MGP_PahariEiJ_G0013541) Rat MODERN SPECIES Pik3c2a (ENSRNOG00000020479) Rps13 (ENSRNOG00000068955) ##8 ENSRNOG00000070857 Plekha7 (ENSRNOG00000024602) #10 C1h11orf58 (ENSRNOG00000053659) #11 Sox6 (ENSRNOG00000020514) #12 Insc (ENSRNOG00000024712) #14 Calca (ENSRNOG00000011130) Cyp2r1 (ENSRNOG00000011367) #17 LOC102548890 (ENSRNOG00000062071) Pde3b (ENSRNOG00000011417) #19 LOC691427 (ENSRNOG00000066701) Psma1 (ENSRNOG00000011745) #20 Copb1 (ENSRNOG00000057623) #21 AABR07005506.1 (ENSRNOG00000025122) Rras2 (ENSRNOG00000012258) #22 Spon1 (ENSRNOG00000058003) #23 Far1 (ENSRNOG00000013176) #24 Pth (ENSRNOG00000014318) #25 Btbd10 (ENSRNOG00000014341) #26 Bmal1 (ENSRNOG00000014448) #27 ENSRNOG00000065112 Rassf10 (ENSRNOG00000064154) #28 LOC120099907 (ENSRNOG00000043512) Tead1 (ENSRNOG00000015488) #29 Parva (ENSRNOG00000015713) #31 Mical2 (ENSRNOG00000016210) #32 Mical2 (ENSRNOG00000016244) #33 Dkk3 (ENSRNOG00000016343) #34 Usp47 (ENSRNOG00000026754) #35 Galnt18 (ENSRNOG00000017021) #36 Cricetidae ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.k.b #11 ENSGT01030000235062 ENSGT00390000000687.l #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000157381 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00390000017491.t.o.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.k.b #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Chinese hamster chok1gshd MODERN SPECIES 401 Rps13 (ENSCGRG00001014781) ##8 Plekha7 (ENSCGRG00001017451) #10 1110004F10Rik (ENSCGRG00001010020) #11 Sox6 (ENSCGRG00001012054) #12 Insc (ENSCGRG00001015851) #14 Calcb (ENSCGRG00001001258) #15 ENSCGRG00001000446 Calca (ENSCGRG00001021467) Cyp2r1 (ENSCGRG00001016255) #17 ENSCGRG00001007984 ENSCGRG00001000399 Pde3b (ENSCGRG00001010130) #19 Psma1 (ENSCGRG00001018590) #20 Copb1 (ENSCGRG00001016852) #21 ENSCGRG00001014592 Rras2 (ENSCGRG00001010770) #22 Spon1 (ENSCGRG00001021186) #23 Far1 (ENSCGRG00001015317) #24 Pth (ENSCGRG00001000135) #25 ENSCGRG00001021117 #26 Arntl (ENSCGRG00001019562) #27 ENSCGRG00001008296 ##8 Rassf10 (ENSCGRG00001001920) #28 Tead1 (ENSCGRG00001013104) #29 Parva (ENSCGRG00001012664) #31 ENSCGRG00001015264 #32 Mical2 (ENSCGRG00001018120) #33 Dkk3 (ENSCGRG00001011083) #34 Usp47 (ENSCGRG00001022381) #35 Galnt18 (ENSCGRG00001017979) #36 ENSCGRG00001010867 Golden Hamster MODERN SPECIES 673 ENSMAUG00000016548 ENSMAUG00000019468 Xylt1 (ENSMAUG00000012923) Nucb2 (ENSMAUG00000011875) Pik3c2a (ENSMAUG00000009052) ENSMAUG00000013319 ##8 Plekha7 (ENSMAUG00000021482) #10 ENSMAUG00000018341 Sox6 (ENSMAUG00000006668) #12 Insc (ENSMAUG00000013925) #14 Calcb (ENSMAUG00000018976) #15 Calca (ENSMAUG00000001971) Cyp2r1 (ENSMAUG00000019753) #17 Copb1 (ENSMAUG00000020925) #21 ENSMAUG00000013937 Rras2 (ENSMAUG00000018548) #22 ENSMAUG00000010226 #23 ENSMAUG00000006080 ENSMAUG00000019672 #23 Far1 (ENSMAUG00000010126) #24 ENSMAUG00000006495 Pth (ENSMAUG00000010728) #25 Btbd10 (ENSMAUG00000013779) #26 Arntl (ENSMAUG00000009271) #27 Tead1 (ENSMAUG00000016475) #29 Parva (ENSMAUG00000008966) #31 ENSMAUG00000000533 #32 Mical2 (ENSMAUG00000008513) #33 Dkk3 (ENSMAUG00000019741) #34 Usp47 (ENSMAUG00000011582) #35 ENSMAUG00000006179 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.o.b.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.k.b #11 ENSGT01030000235062 ENSGT00390000000687.l #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Prairie vole MODERN SPECIES 16 ENSMOCG00000003481 Xylt1 (ENSMOCG00000021542) Nucb2 (ENSMOCG00000006832) Pik3c2a (ENSMOCG00000019109) ENSMOCG00000019112 ##8 Plekha7 (ENSMOCG00000017575) #10 1110004F10Rik (ENSMOCG00000009144) #11 Sox6 (ENSMOCG00000004816) #12 Insc (ENSMOCG00000020814) #14 Calcb (ENSMOCG00000013740) #15 Calca (ENSMOCG00000021156) Cyp2r1 (ENSMOCG00000015196) #17 Pde3b (ENSMOCG00000014972) #19 Psma1 (ENSMOCG00000001230) #20 Copb1 (ENSMOCG00000007249) #21 Rras2 (ENSMOCG00000001879) #22 Spon1 (ENSMOCG00000013869) #23 Far1 (ENSMOCG00000021238) #24 Pth (ENSMOCG00000004314) #25 Btbd10 (ENSMOCG00000011664) #26 Arntl (ENSMOCG00000010413) #27 Rassf10 (ENSMOCG00000009099) #28 Tead1 (ENSMOCG00000010219) #29 Parva (ENSMOCG00000014591) #31 ENSMOCG00000020902 #32 Mical2 (ENSMOCG00000000924) #33 Dkk3 (ENSMOCG00000005883) #34 Usp47 (ENSMOCG00000007031) #35 Galnt18 (ENSMOCG00000000476) #36 Eif4g2 (ENSMOCG00000020486) Ctr9 (ENSMOCG00000020082) Northern American deer mouse MODERN SPECIES Xylt1 (ENSPEMG00000010054) ENSPEMG00000028007 Nucb2 (ENSPEMG00000022928) Pik3c2a (ENSPEMG00000022075) Rps13 (ENSPEMG00000029873) ##8 Plekha7 (ENSPEMG00000011588) #10 ENSPEMG00000025150 #11 ENSPEMG00000028916 Insc (ENSPEMG00000009976) #14 Calcb (ENSPEMG00000006071) #15 Calca (ENSPEMG00000018008) Cyp2r1 (ENSPEMG00000016804) #17 Pde3b (ENSPEMG00000017402) #19 Psma1 (ENSPEMG00000011421) #20 Copb1 (ENSPEMG00000015316) #21 Rras2 (ENSPEMG00000030965) #22 Spon1 (ENSPEMG00000013759) #23 Far1 (ENSPEMG00000020800) #24 Pth (ENSPEMG00000013697) #25 Btbd10 (ENSPEMG00000010670) #26 Arntl (ENSPEMG00000011047) #27 ENSPEMG00000024980 Rassf10 (ENSPEMG00000006120) #28 Tead1 (ENSPEMG00000008435) #29 Parva (ENSPEMG00000000432) #31 ENSPEMG00000000182 #32 Mical2 (ENSPEMG00000008404) #33 Dkk3 (ENSPEMG00000017049) #34 Usp47 (ENSPEMG00000012643) #35 Galnt18 (ENSPEMG00000013223) #36 ENSPEMG00000025634 #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1662 Nucb2 (ENSNGAG00000016698) Pik3c2a (ENSNGAG00000016271) ENSNGAG00000017845 ##8 Plekha7 (ENSNGAG00000022048) #10 1110004F10Rik (ENSNGAG00000022996) #11 Sox6 (ENSNGAG00000007557) #12 Insc (ENSNGAG00000024094) #14 Calcb (ENSNGAG00000023192) #15 Calca (ENSNGAG00000016407) Cyp2r1 (ENSNGAG00000022618) #17 Pde3b (ENSNGAG00000023861) #19 Psma1 (ENSNGAG00000023475) #20 Copb1 (ENSNGAG00000021457) #21 Rras2 (ENSNGAG00000001129) #22 Spon1 (ENSNGAG00000020103) #23 Far1 (ENSNGAG00000024267) #24 Pth (ENSNGAG00000023725) #25 Btbd10 (ENSNGAG00000023695) #26 Arntl (ENSNGAG00000015200) #27 Rassf10 (ENSNGAG00000023204) #28 Tead1 (ENSNGAG00000023367) #29 Parva (ENSNGAG00000022660) #31 ENSNGAG00000005767 #32 Mical2 (ENSNGAG00000020678) #33 Dkk3 (ENSNGAG00000006320) #34 Usp47 (ENSNGAG00000021678) #35 Galnt18 (ENSNGAG00000024177) #36 ENSNGAG00000014324 #37 Eif4g2 (ENSNGAG00000024067) Lesser Egyptian jerboa MODERN SPECIES 43 Pik3c2a (ENSJJAG00000022972) ENSJJAG00000001032 Rps13 (ENSJJAG00000014986) ##8 Plekha7 (ENSJJAG00000015908) #10 ENSJJAG00000007100 #11 ENSJJAG00000018380 Sox6 (ENSJJAG00000019247) #12 Insc (ENSJJAG00000008221) #14 Calcb (ENSJJAG00000009837) #15 Calca (ENSJJAG00000007984) ENSJJAG00000009221 Cyp2r1 (ENSJJAG00000007428) #17 Pde3b (ENSJJAG00000003122) #19 Psma1 (ENSJJAG00000016996) #20 Copb1 (ENSJJAG00000013738) #21 Rras2 (ENSJJAG00000023091) #22 Spon1 (ENSJJAG00000021081) #23 Far1 (ENSJJAG00000023677) #24 Pth (ENSJJAG00000020801) #25 ENSJJAG00000021998 #26 Arntl (ENSJJAG00000018760) #27 Rassf10 (ENSJJAG00000013526) #28 Tead1 (ENSJJAG00000020173) #29 Parva (ENSJJAG00000013058) #31 ENSJJAG00000022447 #32 Mical2 (ENSJJAG00000021294) #33 Dkk3 (ENSJJAG00000013289) #34 Usp47 (ENSJJAG00000022599) #35 Galnt18 (ENSJJAG00000021987) #36 ENSJJAG00000011627 ENSJJAG00000011119 Lagomorpha ANCESTRAL SPECIES 72 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Pika MODERN SPECIES 1226 RRAS2 (ENSOPRG00000005967) #22 Rabbit MODERN SPECIES ENSOCUG00000014949 MGRG2 (ENSOCUG00000034538) ENSOCUG00000028073 ENSOCUG00000015709 ENSOCUG00000008648 PTPN5 (ENSOCUG00000009923) INSC (ENSOCUG00000003080) #14 CALCB (ENSOCUG00000003076) #15 ENSOCUG00000021599 CALCA (ENSOCUG00000002452) CYP2R1 (ENSOCUG00000021933) #17 PDE3B (ENSOCUG00000007719) #19 PSMA1 (ENSOCUG00000000439) #20 COPB1 (ENSOCUG00000000432) #21 ENSOCUG00000033417 RRAS2 (ENSOCUG00000011362) #22 SPON1 (ENSOCUG00000011350) #23 FAR1 (ENSOCUG00000004336) #24 PTH (ENSOCUG00000005469) #25 BMAL1 (ENSOCUG00000005940) #27 BTBD10 (ENSOCUG00000005952) #26 RASSF10 (ENSOCUG00000026389) #28 TEAD1 (ENSOCUG00000007955) #29 PARVA (ENSOCUG00000013101) #31 ENSOCUG00000001302 MICAL2 (ENSOCUG00000001299) #33 DKK3 (ENSOCUG00000004841) #34 USP47 (ENSOCUG00000004832) #35 ENSOCUG00000033724 ENSOCUG00000036590 GALNT18 (ENSOCUG00000015212) #36 Tree shrew MODERN SPECIES 2569 RRAS2 (ENSTBEG00000001292) #22 SPON1 (ENSTBEG00000000640) #23 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.b ##8 ENSGT00940000175801 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Eulipotyphla ANCESTRAL SPECIES 1988 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 Common shrew MODERN SPECIES 3665 RRAS2 (ENSSARG00000000390) #22 ENSSARG00000000387 #23 Hedgehog MODERN SPECIES 3033 ENSEEUG00000000240 #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000157813 ENSGT00390000017491.s.b ##8 ENSGT00940000175801 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000157813 ENSGT00390000017491.s.b ##8 ENSGT00940000175801 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Carnivora ANCESTRAL SPECIES 7 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.b ##8 ENSGT00940000175801 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Felidae ANCESTRAL SPECIES ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u.j.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Panthera ANCESTRAL SPECIES 13 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u.j.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Panthera_a ANCESTRAL SPECIES 20 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u.j.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 leopard MODERN SPECIES 29 NUCB2 (ENSPPRG00000003722) ENSPPRG00000004343 PIK3C2A (ENSPPRG00000004750) ENSPPRG00000005193 ##8 PLEKHA7 (ENSPPRG00000008439) #10 C11orf58 (ENSPPRG00000009350) #11 SOX6 (ENSPPRG00000013207) #12 ENSPPRG00000013736 INSC (ENSPPRG00000016954) #14 CALCB (ENSPPRG00000020148) #15 ENSPPRG00000023221 CYP2R1 (ENSPPRG00000022665) #17 PDE3B (ENSPPRG00000000697) #19 PSMA1 (ENSPPRG00000001324) #20 COPB1 (ENSPPRG00000003968) #21 RRAS2 (ENSPPRG00000006082) #22 SPON1 (ENSPPRG00000006195) #23 FAR1 (ENSPPRG00000006618) #24 ENSPPRG00000018396 PTH (ENSPPRG00000007081) #25 BTBD10 (ENSPPRG00000007872) #26 BMAL1 (ENSPPRG00000011644) #27 RASSF10 (ENSPPRG00000018650) #28 TEAD1 (ENSPPRG00000017830) #29 PARVA (ENSPPRG00000020794) #31 ENSPPRG00000021793 ENSPPRG00000023011 #32 MICAL2 (ENSPPRG00000005596) #33 DKK3 (ENSPPRG00000006342) #34 USP47 (ENSPPRG00000008713) #35 GALNT18 (ENSPPRG00000009793) #36 lion MODERN SPECIES 10 ENSPLOG00000011439 NUCB2 (ENSPLOG00000011132) ENSPLOG00000011047 PIK3C2A (ENSPLOG00000010953) RPS13 (ENSPLOG00000010890) ##8 PLEKHA7 (ENSPLOG00000010586) #10 C11orf58 (ENSPLOG00000010495) #11 ENSPLOG00000010453 SOX6 (ENSPLOG00000010257) #12 INSC (ENSPLOG00000010032) #14 CALCA (ENSPLOG00000009923) CYP2R1 (ENSPLOG00000009867) #17 PDE3B (ENSPLOG00000009724) #19 PSMA1 (ENSPLOG00000009654) #20 COPB1 (ENSPLOG00000009586) #21 RRAS2 (ENSPLOG00000009540) #22 SPON1 (ENSPLOG00000009449) #23 FAR1 (ENSPLOG00000009385) #24 ENSPLOG00000009349 PTH (ENSPLOG00000009324) #25 BTBD10 (ENSPLOG00000009236) #26 BMAL1 (ENSPLOG00000008980) #27 RASSF10 (ENSPLOG00000008927) #28 TEAD1 (ENSPLOG00000008642) #29 PARVA (ENSPLOG00000008506) #31 ENSPLOG00000008438 #32 MICAL2 (ENSPLOG00000008342) #33 DKK3 (ENSPLOG00000008271) #34 USP47 (ENSPLOG00000007945) #35 GALNT18 (ENSPLOG00000007788) #36 ZBED5 (ENSPLOG00000007663) #37 Tiger MODERN SPECIES 181 KCNJ11 (ENSPTIG00000005960) ENSPTIG00000011519 NUCB2 (ENSPTIG00000004594) PIK3C2A (ENSPTIG00000000013) RPS13 (ENSPTIG00000021592) ##8 PLEKHA7 (ENSPTIG00000020256) #10 C11orf58 (ENSPTIG00000020023) #11 SOX6 (ENSPTIG00000016273) #12 INSC (ENSPTIG00000013388) #14 CALCB (ENSPTIG00000012066) #15 CALCA (ENSPTIG00000011763) CYP2R1 (ENSPTIG00000010838) #17 PDE3B (ENSPTIG00000007753) #19 PSMA1 (ENSPTIG00000006030) #20 COPB1 (ENSPTIG00000020083) #21 RRAS2 (ENSPTIG00000018792) #22 SPON1 (ENSPTIG00000017450) #23 FAR1 (ENSPTIG00000016508) #24 PTH (ENSPTIG00000015285) #25 BTBD10 (ENSPTIG00000014424) #26 BMAL1 (ENSPTIG00000013181) #27 TEAD1 (ENSPTIG00000012563) #29 PARVA (ENSPTIG00000010785) #31 ENSPTIG00000008206 #32 MICAL2 (ENSPTIG00000021123) #33 DKK3 (ENSPTIG00000020121) #34 USP47 (ENSPTIG00000016427) #35 GALNT18 (ENSPTIG00000014136) #36 ZBED5 (ENSPTIG00000004617) #37 EIF4G2 (ENSPTIG00000012255) CTR9 (ENSPTIG00000011616) Cat DUPLICATION Cat MODERN SPECIES 241 NUCB2 (ENSFCAG00000007304) PIK3C2A (ENSFCAG00000023161) ENSFCAG00000042979 ##8 ENSFCAG00000033219 PLEKHA7 (ENSFCAG00000007029) #10 CD1H11orf58 (ENSFCAG00000036407) #11 SOX6 (ENSFCAG00000002214) #12 INSC (ENSFCAG00000002733) #14 CALCB (ENSFCAG00000034071) #15 ENSFCAG00000051414 ENSFCAG00000035489 CYP2R1 (ENSFCAG00000011383) #17 PDE3B (ENSFCAG00000022296) #19 PSMA1 (ENSFCAG00000011381) #20 COPB1 (ENSFCAG00000011380) #21 RRAS2 (ENSFCAG00000009578) #22 SPON1 (ENSFCAG00000009573) #23 FAR1 (ENSFCAG00000024350) #24 PTH (ENSFCAG00000045547) #25 BTBD10 (ENSFCAG00000030981) #26 ARNTL (ENSFCAG00000010983) #27 RASSF10 (ENSFCAG00000041884) #28 TEAD1 (ENSFCAG00000019353) #29 PARVA (ENSFCAG00000026661) #31 MICAL2 (ENSFCAG00000024810) #33 DKK3 (ENSFCAG00000028463) #34 USP47 (ENSFCAG00000000922) #35 GALNT18 (ENSFCAG00000002235) #36 ZBED5 (ENSFCAG00000000411) #37 EIF4G2 (ENSFCAG00000022269) CTR9 (ENSFCAG00000000407) Cat MODERN SPECIES 1 ZNF804B (ENSFCAG00000008141) STEAP4 (ENSFCAG00000024344) SRI (ENSFCAG00000026291) ADAM22 (ENSFCAG00000025413) DBF4 (ENSFCAG00000031040) SLC25A40 (ENSFCAG00000015123) ENSFCAG00000033132 RUNDC3B (ENSFCAG00000028861) ENSFCAG00000051901 ABCB1 (ENSFCAG00000027959) CROT (ENSFCAG00000031699) TMEM243 (ENSFCAG00000042545) DMTF1 (ENSFCAG00000013756) ELAPOR2 (ENSFCAG00000007415) GRM3 (ENSFCAG00000024012) ENSFCAG00000035713 #22 SEMA3D (ENSFCAG00000024803) SEMA3A (ENSFCAG00000028062) SEMA3E (ENSFCAG00000031520) PCLO (ENSFCAG00000002901) CACNA2D1 (ENSFCAG00000029914) HGF (ENSFCAG00000008554) ENSFCAG00000044481 SEMA3C (ENSFCAG00000022953) CD36 (ENSFCAG00000024268) GNAT3 (ENSFCAG00000039282) GNAI1 (ENSFCAG00000007172) ENSFCAG00000023790 MAGI2 (ENSFCAG00000030754) ENSFCAG00000053710 PHTF2 (ENSFCAG00000023878) Caniformia ANCESTRAL SPECIES 25 ENSGT00940000157813 ENSGT00390000017491.s.b ##8 ENSGT00940000175801 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a.b #20 ENSGT00550000074855.u.a.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000167380 ENSGT00940000166205 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Ursidae ANCESTRAL SPECIES 2 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a.b #20 ENSGT00550000074855.u.a.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Ursus ANCESTRAL SPECIES 193 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00950000186350 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 American black bear MODERN SPECIES 1430 PSMA1 (ENSUAMG00000019824) #20 COPB1 (ENSUAMG00000019844) #21 RRAS2 (ENSUAMG00000019845) #22 SPON1 (ENSUAMG00000019846) #23 Polar bear MODERN SPECIES 472 ENSUMAG00000017142 #15 CYP2R1 (ENSUMAG00000017113) #17 PDE3B (ENSUMAG00000017044) #19 PSMA1 (ENSUMAG00000017009) #20 COPB1 (ENSUMAG00000017001) #21 RRAS2 (ENSUMAG00000016991) #22 SPON1 (ENSUMAG00000016643) #23 FAR1 (ENSUMAG00000016590) #24 PTH (ENSUMAG00000016585) #25 BTBD10 (ENSUMAG00000016582) #26 BMAL1 (ENSUMAG00000016570) #27 TEAD1 (ENSUMAG00000016468) #29 PARVA (ENSUMAG00000016356) #31 ENSUMAG00000016340 #32 MICAL2 (ENSUMAG00000016244) #33 DKK3 (ENSUMAG00000016222) #34 USP47 (ENSUMAG00000016212) #35 GALNT18 (ENSUMAG00000016168) #36 ZBED5 (ENSUMAG00000016156) #37 ENSUMAG00000016144 Giant Panda MODERN SPECIES 7 ENSAMEG00000003021 NUCB2 (ENSAMEG00000002982) PIK3C2A (ENSAMEG00000002916) ENSAMEG00000002895 ##8 ENSAMEG00000002891 PLEKHA7 (ENSAMEG00000002856) #10 C11orf58 (ENSAMEG00000002845) #11 SOX6 (ENSAMEG00000015112) #12 INSC (ENSAMEG00000015118) #14 ENSAMEG00000015132 CALCB (ENSAMEG00000001579) #15 CYP2R1 (ENSAMEG00000002507) #17 PDE3B (ENSAMEG00000002486) #19 PSMA1 (ENSAMEG00000002440) #20 COPB1 (ENSAMEG00000002370) #21 RRAS2 (ENSAMEG00000002367) #22 SPON1 (ENSAMEG00000002355) #23 FAR1 (ENSAMEG00000002333) #24 PTH (ENSAMEG00000002395) #25 ENSAMEG00000002384 #26 ENSAMEG00000029410 #27 RASSF10 (ENSAMEG00000026953) #28 TEAD1 (ENSAMEG00000002258) #29 PARVA (ENSAMEG00000005997) #31 MICAL2 (ENSAMEG00000005915) #33 DKK3 (ENSAMEG00000005897) #34 USP47 (ENSAMEG00000005838) #35 ENSAMEG00000001150 #36 ENSAMEG00000028051 ENSAMEG00000028022 OR6C76 (ENSAMEG00000019564) Mustelinae ANCESTRAL SPECIES 30 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000166205 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.u.a.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Ferret MODERN SPECIES 194 PIK3C2A (ENSMPUG00000013343) ENSMPUG00000013316 ##8 PLEKHA7 (ENSMPUG00000013304) #10 C11orf58 (ENSMPUG00000013301) #11 SOX6 (ENSMPUG00000013283) #12 ENSMPUG00000013278 INSC (ENSMPUG00000013267) #14 CALCB (ENSMPUG00000013262) #15 ENSMPUG00000013259 ENSMPUG00000013255 CYP2R1 (ENSMPUG00000013250) #17 ENSMPUG00000018995 PDE3B (ENSMPUG00000013242) #19 PSMA1 (ENSMPUG00000013199) #20 COPB1 (ENSMPUG00000013192) #21 RRAS2 (ENSMPUG00000013165) #22 SPON1 (ENSMPUG00000013162) #23 FAR1 (ENSMPUG00000013158) #24 PTH (ENSMPUG00000013152) #25 BTBD10 (ENSMPUG00000013145) #26 BMAL1 (ENSMPUG00000013135) #27 RASSF10 (ENSMPUG00000013121) #28 TEAD1 (ENSMPUG00000013114) #29 PARVA (ENSMPUG00000013102) #31 ENSMPUG00000013082 #32 MICAL2 (ENSMPUG00000013022) #33 ENSMPUG00000013019 DKK3 (ENSMPUG00000013009) #34 USP47 (ENSMPUG00000012995) #35 GALNT18 (ENSMPUG00000012990) #36 ZBED5 (ENSMPUG00000018990) #37 American mink MODERN SPECIES 13 KCNJ11 (ENSNVIG00000020022) B7H6 (ENSNVIG00000020028) NUCB2 (ENSNVIG00000020065) PIK3C2A (ENSNVIG00000020155) RPS13 (ENSNVIG00000020246) ##8 PLEKHA7 (ENSNVIG00000020293) #10 C11orf58 (ENSNVIG00000020393) #11 SOX6 (ENSNVIG00000020411) #12 INSC (ENSNVIG00000020515) #14 CALCB (ENSNVIG00000020671) #15 CALCA (ENSNVIG00000020682) CYP2R1 (ENSNVIG00000020712) #17 PDE3B (ENSNVIG00000020721) #19 ENSNVIG00000020759 #20 COPB1 (ENSNVIG00000020799) #21 RRAS2 (ENSNVIG00000020872) #22 SPON1 (ENSNVIG00000020895) #23 FAR1 (ENSNVIG00000020912) #24 PTH (ENSNVIG00000020930) #25 BTBD10 (ENSNVIG00000020940) #26 BMAL1 (ENSNVIG00000020993) #27 RASSF10 (ENSNVIG00000021027) #28 TEAD1 (ENSNVIG00000021030) #29 Canidae ANCESTRAL SPECIES 1 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.s.b ##8 ENSGT00940000175801 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.v.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000172584.c.b.b ENSGT00940000155456 #36 ENSGT00950000182803.B.d.a.j ENSGT00940000162521 #37 Canis_lupus ANCESTRAL SPECIES 4 ENSGT00940000175801 ENSGT00390000017491.t.u.a.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.e.b #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000162876.l ENSGT00940000162876.k.b ENSGT00940000156267 #15 ENSGT00390000006370.g ENSGT00940000158305 #17 ENSGT00940000159336.k #19 ENSGT00550000074855.u.a.b #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000172584.c.b.b ENSGT00940000155456 #36 ENSGT00950000182803.B.d.a.j ENSGT00940000162521 #37 Dog MODERN SPECIES 13 INSC (ENSCAFG00845023608) #14 CALCA (ENSCAFG00845023464) CRSP-2 (ENSCAFG00845023366) CRSP-3 (ENSCAFG00845023281) CALCB (ENSCAFG00845023210) #15 ENSCAFG00845023057 ENSCAFG00845023032 CYP2R1 (ENSCAFG00845022957) #17 ENSCAFG00845022709 #19 ENSCAFG00845022568 ENSCAFG00845022519 ENSCAFG00845022374 #17 ENSCAFG00845022095 #19 PSMA1 (ENSCAFG00845021870) #20 COPB1 (ENSCAFG00845021578) #21 RRAS2 (ENSCAFG00845021419) #22 SPON1 (ENSCAFG00845021179) #23 FAR1 (ENSCAFG00845020980) #24 PTH (ENSCAFG00845020842) #25 BTBD10 (ENSCAFG00845020680) #26 BMAL1 (ENSCAFG00845020372) #27 RASSF10 (ENSCAFG00845020309) #28 TEAD1 (ENSCAFG00845019509) #29 PARVA (ENSCAFG00845019108) #31 MICAL2 (ENSCAFG00845017757) #33 DKK3 (ENSCAFG00845017299) #34 USP47 (ENSCAFG00845016435) #35 GALNT18 (ENSCAFG00845015625) #36 ENSCAFG00845015498 ZBED5 (ENSCAFG00845015479) #37 EIF4G2 (ENSCAFG00845015267) Dingo MODERN SPECIES 231 ENSCAFG00020017408 ##8 PLEKHA7 (ENSCAFG00020017394) #10 ENSCAFG00020017379 #11 SOX6 (ENSCAFG00020017327) #12 INSC (ENSCAFG00020017307) #14 ENSCAFG00020017290 ENSCAFG00020017285 ENSCAFG00020017277 CALCB (ENSCAFG00020017275) #15 ENSCAFG00020017268 ENSCAFG00020017266 CYP2R1 (ENSCAFG00020017254) #17 PDE3B (ENSCAFG00020017213) #19 ENSCAFG00020017202 #20 COPB1 (ENSCAFG00020017195) #21 RRAS2 (ENSCAFG00020017190) #22 SPON1 (ENSCAFG00020017055) #23 FAR1 (ENSCAFG00020016575) #24 ENSCAFG00020016558 PTH (ENSCAFG00020016557) #25 BTBD10 (ENSCAFG00020016555) #26 BMAL1 (ENSCAFG00020016447) #27 RASSF10 (ENSCAFG00020016424) #28 TEAD1 (ENSCAFG00020016417) #29 PARVA (ENSCAFG00020016402) #31 MICAL2 (ENSCAFG00020016361) #33 DKK3 (ENSCAFG00020016344) #34 USP47 (ENSCAFG00020016333) #35 ENSCAFG00020016327 GALNT18 (ENSCAFG00020016314) #36 ENSCAFG00020016299 Red fox MODERN SPECIES 70 RPS13 (ENSVVUG00000024098) ##8 PLEKHA7 (ENSVVUG00000024123) #10 ENSVVUG00000024192 #11 SOX6 (ENSVVUG00000024203) #12 INSC (ENSVVUG00000024215) #14 ENSVVUG00000024218 CALCB (ENSVVUG00000024219) #15 ENSVVUG00000024222 CYP2R1 (ENSVVUG00000024223) #17 ENSVVUG00000024224 ENSVVUG00000024225 #15 ENSVVUG00000024228 PDE3B (ENSVVUG00000024229) #19 ENSVVUG00000024241 #20 COPB1 (ENSVVUG00000024246) #21 RRAS2 (ENSVVUG00000024249) #22 SPON1 (ENSVVUG00000024273) #23 FAR1 (ENSVVUG00000025136) #24 PTH (ENSVVUG00000025139) #25 BTBD10 (ENSVVUG00000025143) #26 ARNTL (ENSVVUG00000025156) #27 RASSF10 (ENSVVUG00000025172) #28 TEAD1 (ENSVVUG00000025176) #29 PARVA (ENSVVUG00000025185) #31 MICAL2 (ENSVVUG00000025208) #33 DKK3 (ENSVVUG00000025251) #34 USP47 (ENSVVUG00000025275) #35 ENSVVUG00000025285 GALNT18 (ENSVVUG00000025293) #36 ENSVVUG00000025296 ZBED5 (ENSVVUG00000025297) #37 Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Equus ANCESTRAL SPECIES 40 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00390000013819 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 ENSGT00390000005097 Donkey MODERN SPECIES 12 PIK3C2A (ENSEASG00005006116) ENSEASG00005006041 ##8 PLEKHA7 (ENSEASG00005006038) #10 C11orf58 (ENSEASG00005033834) #11 SOX6 (ENSEASG00005006024) #12 INSC (ENSEASG00005006018) #14 CALCB (ENSEASG00005006012) #15 ENSEASG00005030327 ENSEASG00005027691 ENSEASG00005006008 ENSEASG00005006005 #17 PDE3B (ENSEASG00005005968) #19 PSMA1 (ENSEASG00005005940) #20 COPB1 (ENSEASG00005005937) #21 ENSEASG00005026622 RRAS2 (ENSEASG00005005934) #22 SPON1 (ENSEASG00005005931) #23 FAR1 (ENSEASG00005005927) #24 PTH (ENSEASG00005005922) #25 BTBD10 (ENSEASG00005005917) #26 BMAL1 (ENSEASG00005005913) #27 RASSF10 (ENSEASG00005005911) #28 TEAD1 (ENSEASG00005005906) #29 PARVA (ENSEASG00005005901) #31 MICAL2 (ENSEASG00005005893) #33 DKK3 (ENSEASG00005005891) #34 USP47 (ENSEASG00005005889) #35 GALNT18 (ENSEASG00005005887) #36 ZBED5 (ENSEASG00005005885) #37 EIF4G2 (ENSEASG00005005881) CTR9 (ENSEASG00005005878) Horse MODERN SPECIES 28 PIK3C2A (ENSECAG00000014963) RPS13 (ENSECAG00000014928) ##8 PLEKHA7 (ENSECAG00000011848) #10 C7H11orf58 (ENSECAG00000011778) #11 ENSECAG00000050226 SOX6 (ENSECAG00000010880) #12 INSC (ENSECAG00000009559) #14 ENSECAG00000008818 #15 ENSECAG00000008669 CALCA (ENSECAG00000007825) CYP2R1 (ENSECAG00000007597) #17 PDE3B (ENSECAG00000024797) #19 PSMA1 (ENSECAG00000024086) #20 ENSECAG00000057029 COPB1 (ENSECAG00000021898) #21 RRAS2 (ENSECAG00000021393) #22 SPON1 (ENSECAG00000020789) #23 FAR1 (ENSECAG00000019618) #24 PTH (ENSECAG00000019608) #25 BTBD10 (ENSECAG00000017056) #26 ARNTL (ENSECAG00000012118) #27 RASSF10 (ENSECAG00000012098) #28 TEAD1 (ENSECAG00000008332) #29 PARVA (ENSECAG00000005460) #31 MICAL2 (ENSECAG00000023190) #33 DKK3 (ENSECAG00000022804) #34 USP47 (ENSECAG00000020838) #35 GALNT18 (ENSECAG00000019364) #36 ZBED5 (ENSECAG00000006542) #37 EIF4G2 (ENSECAG00000014700) CTR9 (ENSECAG00000010969) Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Megabat MODERN SPECIES 3099 RRAS2 (ENSPVAG00000009231) #22 SPON1 (ENSPVAG00000009230) #23 FAR1 (ENSPVAG00000009229) #24 Microchiroptera ANCESTRAL SPECIES 31 ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000162876 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Greater horseshoe bat MODERN SPECIES 2 PIK3C2A (ENSRFEG00010021091) ENSRFEG00010021136 ##8 PLEKHA7 (ENSRFEG00010021179) #10 C11orf58 (ENSRFEG00010021253) #11 ENSRFEG00010021282 SOX6 (ENSRFEG00010021298) #12 INSC (ENSRFEG00010021354) #14 ENSRFEG00010021391 ENSRFEG00010021405 #15 ENSRFEG00010021410 ENSRFEG00010021417 #15 CYP2R1 (ENSRFEG00010021421) #17 PDE3B (ENSRFEG00010021438) #19 PSMA1 (ENSRFEG00010021475) #20 COPB1 (ENSRFEG00010021503) #21 RRAS2 (ENSRFEG00010021520) #22 SPON1 (ENSRFEG00010021527) #23 FAR1 (ENSRFEG00010021546) #24 PTH (ENSRFEG00010021570) #25 BTBD10 (ENSRFEG00010021587) #26 BMAL1 (ENSRFEG00010021622) #27 RASSF10 (ENSRFEG00010021663) #28 TEAD1 (ENSRFEG00010021681) #29 PARVA (ENSRFEG00010000596) #31 ENSRFEG00010000712 #33 DKK3 (ENSRFEG00010000855) #34 USP47 (ENSRFEG00010000943) #35 GALNT18 (ENSRFEG00010001162) #36 ENSRFEG00010001223 EIF4G2 (ENSRFEG00010001270) CTR9 (ENSRFEG00010001353) Microbat MODERN SPECIES 998 ENSMLUG00000001238 CYP2R1 (ENSMLUG00000000625) #17 PDE3B (ENSMLUG00000009266) #19 PSMA1 (ENSMLUG00000009251) #20 COPB1 (ENSMLUG00000009221) #21 RRAS2 (ENSMLUG00000007005) #22 ENSMLUG00000024566 #23 ENSMLUG00000006968 #23 FAR1 (ENSMLUG00000009017) #24 ENSMLUG00000024101 BTBD10 (ENSMLUG00000008529) #26 ENSMLUG00000000677 #25 BMAL1 (ENSMLUG00000008503) #27 ENSMLUG00000023824 RASSF10 (ENSMLUG00000009160) #28 TEAD1 (ENSMLUG00000009137) #29 PARVA (ENSMLUG00000003439) #31 ENSMLUG00000027136 ENSMLUG00000003436 #32 MICAL2 (ENSMLUG00000003421) #33 DKK3 (ENSMLUG00000011767) #34 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Suina ANCESTRAL SPECIES 34 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000166205.a.a ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Pig DUPLICATION Pig MODERN SPECIES 10 PIK3C2A (ENSSSCG00000025406) RPS13 (ENSSSCG00000013381) ##8 PLEKHA7 (ENSSSCG00000013382) #10 C11orf58 (ENSSSCG00000040570) #11 SOX6 (ENSSSCG00000034191) #12 INSC (ENSSSCG00000013385) #14 ENSSSCG00000026512 ENSSSCG00000013386 #15 ENSSSCG00000013387 #15 ENSSSCG00000035649 ENSSSCG00000013390 CYP2R1 (ENSSSCG00000013389) #17 PDE3B (ENSSSCG00000013388) #19 PSMA1 (ENSSSCG00000013391) #20 COPB1 (ENSSSCG00000013392) #21 ENSSSCG00000033786 #22 SPON1 (ENSSSCG00000013393) #23 FAR1 (ENSSSCG00000021170) #24 PTH (ENSSSCG00000013394) #25 BTBD10 (ENSSSCG00000013395) #26 BMAL1 (ENSSSCG00000013397) #27 RASSF10 (ENSSSCG00000022060) #28 TEAD1 (ENSSSCG00000013399) #29 PARVA (ENSSSCG00000028827) #31 ENSSSCG00000031706 #33 DKK3 (ENSSSCG00000013401) #34 USP47 (ENSSSCG00000013402) #35 ENSSSCG00000031143 GALNT18 (ENSSSCG00000013403) #36 ZBED5 (ENSSSCG00000033411) #37 EIF4G2 (ENSSSCG00000013405) Pig MODERN SPECIES ENSSSCG00000005401 SMC2 (ENSSSCG00000005403) ENSSSCG00000063540 ENSSSCG00000059028 OR13C4 (ENSSSCG00000026768) OR13C3 (ENSSSCG00000026865) OR13C8 (ENSSSCG00000031355) ENSSSCG00000005413 ENSSSCG00000057569 ENSSSCG00000047454 ENSSSCG00000054772 ENSSSCG00000061470 ENSSSCG00000035714 ENSSSCG00000005419 ENSSSCG00000005420 ENSSSCG00000035397 #22 NIPSNAP3A (ENSSSCG00000053039) NIPSNAP3B (ENSSSCG00000005424) ABCA1 (ENSSSCG00000005423) SLC44A1 (ENSSSCG00000005425) FSD1L (ENSSSCG00000054150) FKTN (ENSSSCG00000005426) TMEM38B (ENSSSCG00000039896) ENSSSCG00000053150 ENSSSCG00000005430 ENSSSCG00000048390 ENSSSCG00000005432 ZNF462 (ENSSSCG00000031592) RAD23B (ENSSSCG00000005436) KLF4 (ENSSSCG00000005437) ENSSSCG00000051392 Chacoan peccary MODERN SPECIES 919 NUCB2 (ENSCWAG00000018398) PIK3C2A (ENSCWAG00000018580) ENSCWAG00000018676 ##8 PLEKHA7 (ENSCWAG00000018738) #10 C11orf58 (ENSCWAG00000018946) #11 SOX6 (ENSCWAG00000018979) #12 INSC (ENSCWAG00000019215) #14 ENSCWAG00000019318 ENSCWAG00000019335 #15 ENSCWAG00000019355 #15 ENSCWAG00000019380 CYP2R1 (ENSCWAG00000019414) #17 PDE3B (ENSCWAG00000019464) #19 PSMA1 (ENSCWAG00000019593) #20 COPB1 (ENSCWAG00000019654) #21 RRAS2 (ENSCWAG00000019696) #22 SPON1 (ENSCWAG00000019714) #23 FAR1 (ENSCWAG00000019767) #24 PTH (ENSCWAG00000019804) #25 BTBD10 (ENSCWAG00000019816) #26 BMAL1 (ENSCWAG00000011749) #27 RASSF10 (ENSCWAG00000012328) #28 TEAD1 (ENSCWAG00000012371) #29 PARVA (ENSCWAG00000012840) #31 ENSCWAG00000012923 #32 MICAL2 (ENSCWAG00000013219) #33 DKK3 (ENSCWAG00000013360) #34 USP47 (ENSCWAG00000013451) #35 GALNT18 (ENSCWAG00000014175) #36 ZBED5 (ENSCWAG00000014266) #37 EIF4G2 (ENSCWAG00000014282) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Pecora ANCESTRAL SPECIES 7 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Percora_a ANCESTRAL SPECIES 6 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Bovidae ANCESTRAL SPECIES 6 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Caprinae ANCESTRAL SPECIES 6 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00950000183010.a.a.a.b.a.a.a.a.a ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Rambouillet Sheep MODERN SPECIES 6 HSP10 (ENSOARG00020007118) SOX6 (ENSOARG00020007177) #12 INSC (ENSOARG00020007458) #14 CALCA (ENSOARG00020007665) ENSOARG00020007716 #15 ENSOARG00020007733 ENSOARG00020007755 ENSOARG00020007780 ENSOARG00020007797 CALCB (ENSOARG00020007826) ENSOARG00020007898 CYP2R1 (ENSOARG00020008229) #17 PDE3B (ENSOARG00020008382) #19 PSMA1 (ENSOARG00020009114) #20 COPB1 (ENSOARG00020009319) #21 RRAS2 (ENSOARG00020009434) #22 SPON1 (ENSOARG00020009467) #23 FAR1 (ENSOARG00020009547) #24 PTH (ENSOARG00020009626) #25 ENSOARG00020009652 BTBD10 (ENSOARG00020009686) #26 arntl (ENSOARG00020009923) #27 RASSF10 (ENSOARG00020010999) #28 TEAD1 (ENSOARG00020011068) #29 PARVA (ENSOARG00020011875) #31 MICAL2 (ENSOARG00020011978) #33 DKK3 (ENSOARG00020012153) #34 USP47 (ENSOARG00020012457) #35 GALNT18 (ENSOARG00020013870) #36 ZBED5 (ENSOARG00020014031) #37 EIF4G2 (ENSOARG00020014062) Goat MODERN SPECIES 6 PLEKHA7 (ENSCHIG00000013421) #10 C11orf58 (ENSCHIG00000019685) #11 SOX6 (ENSCHIG00000021925) #12 INSC (ENSCHIG00000006694) #14 ENSCHIG00000021622 ENSCHIG00000017738 ENSCHIG00000016702 CRSP-2 (ENSCHIG00000026890) #15 CRSP-1 (ENSCHIG00000016334) ENSCHIG00000021176 CYP2R1 (ENSCHIG00000015003) #17 PDE3B (ENSCHIG00000009677) #19 PSMA1 (ENSCHIG00000019700) #20 COPB1 (ENSCHIG00000016260) #21 ENSCHIG00000012272 RRAS2 (ENSCHIG00000021550) #22 SPON1 (ENSCHIG00000024597) #23 FAR1 (ENSCHIG00000018043) #24 PTH (ENSCHIG00000007602) #25 ENSCHIG00000012359 BTBD10 (ENSCHIG00000026399) #26 BMAL1 (ENSCHIG00000008573) #27 RASSF10 (ENSCHIG00000006553) #28 ENSCHIG00000013740 TEAD1 (ENSCHIG00000015300) #29 PARVA (ENSCHIG00000024855) #31 ENSCHIG00000011918 #32 MICAL2 (ENSCHIG00000024501) #33 DKK3 (ENSCHIG00000011378) #34 USP47 (ENSCHIG00000009969) #35 GALNT18 (ENSCHIG00000012207) #36 Bovinae ANCESTRAL SPECIES 21 ENSGT00390000014320.l ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Bos ANCESTRAL SPECIES 20 ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a.c.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Bos_b ANCESTRAL SPECIES 19 ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00940000166205.a.c.a ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00390000011740.t ENSGT00940000162521 #37 ENSGT00940000154675 Hybrid Bos Indicus MODERN SPECIES 6 ENSBIXG00005012803 PLEKHA7 (ENSBIXG00005012963) #10 C11orf58 (ENSBIXG00005013055) #11 ENSBIXG00005001497 SOX6 (ENSBIXG00005013279) #12 INSC (ENSBIXG00005013489) #14 ENSBIXG00005001650 ENSBIXG00005006728 #15 ENSBIXG00005013598 ENSBIXG00005000258 CYP2R1 (ENSBIXG00005013677) #17 PDE3B (ENSBIXG00005013773) #19 PSMA1 (ENSBIXG00005001733) #20 COPB1 (ENSBIXG00005013907) #21 ENSBIXG00005007265 RRAS2 (ENSBIXG00005014006) #22 SPON1 (ENSBIXG00005001819) #23 FAR1 (ENSBIXG00005014143) #24 PTH (ENSBIXG00005014186) #25 BTBD10 (ENSBIXG00005007269) #26 BMAL1 (ENSBIXG00005014420) #27 RASSF10 (ENSBIXG00005006224) #28 TEAD1 (ENSBIXG00005014750) #29 PARVA (ENSBIXG00005014842) #31 MICAL2 (ENSBIXG00005015056) #33 DKK3 (ENSBIXG00005015200) #34 USP47 (ENSBIXG00005015320) #35 GALNT18 (ENSBIXG00005015461) #36 ENSBIXG00005015507 EIF4G2 (ENSBIXG00005015557) CTR9 (ENSBIXG00005015596) Cow MODERN SPECIES 6 ENSBTAG00000032859 RPS13 (ENSBTAG00000040308) ##8 PLEKHA7 (ENSBTAG00000006974) #10 C15H11orf58 (ENSBTAG00000006755) #11 SOX6 (ENSBTAG00000044185) #12 INSC (ENSBTAG00000032782) #14 CALCB (ENSBTAG00000047380) CALCA (ENSBTAG00000010089) #15 CALCB (ENSBTAG00000001516) ENSBTAG00000048777 CYP2R1 (ENSBTAG00000010419) #17 PDE3B (ENSBTAG00000005218) #19 PSMA1 (ENSBTAG00000006564) #20 COPB1 (ENSBTAG00000006556) #21 ENSBTAG00000009359 RRAS2 (ENSBTAG00000011905) #22 SPON1 (ENSBTAG00000009150) #23 FAR1 (ENSBTAG00000009061) #24 PTH (ENSBTAG00000019080) #25 BTBD10 (ENSBTAG00000013033) #26 ARNTL (ENSBTAG00000013029) #27 RASSF10 (ENSBTAG00000011914) #28 TEAD1 (ENSBTAG00000032657) #29 PARVA (ENSBTAG00000000700) #31 MICAL2 (ENSBTAG00000014855) #33 DKK3 (ENSBTAG00000004275) #34 USP47 (ENSBTAG00000010919) #35 ENSBTAG00000049052 GALNT18 (ENSBTAG00000002914) #36 ENSBTAG00000027716 ZBED5 (ENSBTAG00000010568) #37 Bos_a ANCESTRAL SPECIES 15 ENSGT00940000157813 ENSGT00390000017491.t.u.s.b ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00940000167380 ENSGT00940000156267 #15 ENSGT00390000001511 #14 ENSGT00940000166205.a.c.b ENSGT00940000166205.b ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.b ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 Wild yak MODERN SPECIES 95 PSMA1 (ENSBMUG00000025708) #20 COPB1 (ENSBMUG00000025723) #21 ENSBMUG00000000077 RRAS2 (ENSBMUG00000000088) #22 ENSBMUG00000000546 #23 Domestic yak MODERN SPECIES 4 C11orf58 (ENSBGRG00000009025) #11 SOX6 (ENSBGRG00000008760) #12 ENSBGRG00000008740 INSC (ENSBGRG00000008459) #14 ENSBGRG00000008327 ENSBGRG00000008265 #15 ENSBGRG00000008241 ENSBGRG00000008208 ENSBGRG00000008172 CYP2R1 (ENSBGRG00000008015) #17 ENSBGRG00000007979 PDE3B (ENSBGRG00000007548) #19 PSMA1 (ENSBGRG00000007331) #20 COPB1 (ENSBGRG00000007177) #21 ENSBGRG00000007156 RRAS2 (ENSBGRG00000007061) #22 SPON1 (ENSBGRG00000006912) #23 FAR1 (ENSBGRG00000006854) #24 ENSBGRG00000006837 ENSBGRG00000006818 PTH (ENSBGRG00000006795) #25 BTBD10 (ENSBGRG00000006660) #26 BMAL1 (ENSBGRG00000006454) #27 RASSF10 (ENSBGRG00000006408) #28 PARVA (ENSBGRG00000006152) #31 ENSBGRG00000006072 #32 MICAL2 (ENSBGRG00000005834) #33 DKK3 (ENSBGRG00000005751) #34 USP47 (ENSBGRG00000005464) #35 GALNT18 (ENSBGRG00000005345) #36 ZBED5 (ENSBGRG00000005325) #37 American bison MODERN SPECIES 3365 PIK3C2A (ENSBBBG00000003706) ENSBBBG00000003602 ##8 PLEKHA7 (ENSBBBG00000014936) #10 C11orf58 (ENSBBBG00000000901) #11 SOX6 (ENSBBBG00000000977) #12 INSC (ENSBBBG00000001200) #14 ENSBBBG00000014818 #15 ENSBBBG00000003643 #15 ENSBBBG00000007170 ENSBBBG00000014736 ENSBBBG00000014655 #17 PDE3B (ENSBBBG00000014623) #19 PSMA1 (ENSBBBG00000014567) #20 COPB1 (ENSBBBG00000014540) #21 ENSBBBG00000014492 RRAS2 (ENSBBBG00000003357) #22 SPON1 (ENSBBBG00000014458) #23 FAR1 (ENSBBBG00000014419) #24 PTH (ENSBBBG00000003306) #25 BTBD10 (ENSBBBG00000014389) #26 BMAL1 (ENSBBBG00000014351) #27 RASSF10 (ENSBBBG00000003229) #28 TEAD1 (ENSBBBG00000014216) #29 PARVA (ENSBBBG00000008327) #31 ENSBBBG00000003182 #32 MICAL2 (ENSBBBG00000014118) #33 DKK3 (ENSBBBG00000014092) #34 USP47 (ENSBBBG00000014036) #35 ENSBBBG00000002993 ENSBBBG00000013863 SYAP1 (ENSBBBG00000013849) Siberian musk deer MODERN SPECIES 1170 ENSMMSG00000013583 ##8 PLEKHA7 (ENSMMSG00000013421) #10 C11orf58 (ENSMMSG00000013390) #11 ENSMMSG00000013376 SOX6 (ENSMMSG00000013238) #12 ENSMMSG00000013203 INSC (ENSMMSG00000013119) #14 ENSMMSG00000013030 #15 ENSMMSG00000013014 #15 ENSMMSG00000012997 ENSMMSG00000012931 CYP2R1 (ENSMMSG00000012865) #17 PDE3B (ENSMMSG00000012748) #19 PSMA1 (ENSMMSG00000012625) #20 COPB1 (ENSMMSG00000012559) #21 RRAS2 (ENSMMSG00000012528) #22 ENSMMSG00000012497 SPON1 (ENSMMSG00000012467) #23 Yarkand deer MODERN SPECIES PLEKHA7 (ENSCHYG00000015374) #10 C11orf58 (ENSCHYG00000016095) #11 SOX6 (ENSCHYG00000016309) #12 ENSCHYG00000017074 INSC (ENSCHYG00000017107) #14 ENSCHYG00000017547 ENSCHYG00000017642 #15 ENSCHYG00000017694 ENSCHYG00000017748 CYP2R1 (ENSCHYG00000017908) #17 ENSCHYG00000018022 PDE3B (ENSCHYG00000018075) #19 ENSCHYG00000018606 PSMA1 (ENSCHYG00000018665) #20 COPB1 (ENSCHYG00000000002) #21 RRAS2 (ENSCHYG00000000005) #22 SPON1 (ENSCHYG00000000009) #23 FAR1 (ENSCHYG00000000016) #24 PTH (ENSCHYG00000000021) #25 BTBD10 (ENSCHYG00000000026) #26 BMAL1 (ENSCHYG00000000046) #27 ENSCHYG00000000074 RASSF10 (ENSCHYG00000000084) #28 TEAD1 (ENSCHYG00000000137) #29 PARVA (ENSCHYG00000000246) #31 ENSCHYG00000000289 MICAL2 (ENSCHYG00000000379) #33 DKK3 (ENSCHYG00000000704) #34 USP47 (ENSCHYG00000000758) #35 GALNT18 (ENSCHYG00000000988) #36 EIF4G2 (ENSCHYG00000001043) Cetacea ANCESTRAL SPECIES 4 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267.eb #15 ENSGT00940000167952 ENSGT00940000167380 ENSGT00940000156267.db.a #15 ENSGT00940000166205.a.e ENSGT00940000166205.b ENSGT00940000156267.db.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l.a #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 ENSGT00390000005097 Blue whale MODERN SPECIES 19 ENSBMSG00010011543 SOX6 (ENSBMSG00010011468) #12 INSC (ENSBMSG00010011315) #14 ENSBMSG00010011268 ENSBMSG00010011256 #15 ENSBMSG00010011247 ENSBMSG00010011235 ENSBMSG00010011225 ENSBMSG00010011210 CYP2R1 (ENSBMSG00010011195) #17 ENSBMSG00010011189 ENSBMSG00010011179 PDE3B (ENSBMSG00010011135) #19 PSMA1 (ENSBMSG00010011110) #20 COPB1 (ENSBMSG00010011087) #21 RRAS2 (ENSBMSG00010011072) #22 SPON1 (ENSBMSG00010011058) #23 ENSBMSG00010011043 FAR1 (ENSBMSG00010010996) #24 PTH (ENSBMSG00010010969) #25 BTBD10 (ENSBMSG00010010941) #26 BMAL1 (ENSBMSG00010010519) #27 RASSF10 (ENSBMSG00010010479) #28 ENSBMSG00010010477 ENSBMSG00010010279 #29 PARVA (ENSBMSG00010010228) #31 MICAL2 (ENSBMSG00010010014) #33 ENSBMSG00010009966 #34 USP47 (ENSBMSG00010009711) #35 ENSBMSG00010009644 ENSBMSG00010009639 Odontoceti ANCESTRAL SPECIES 4 ENSGT00390000017491.t.u.r ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000167952 ENSGT00940000156267.eb #15 ENSGT00940000156267.db.a #15 ENSGT00940000166205.a.e ENSGT00940000156267.db.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l.a #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 ENSGT00390000005097 Sperm whale MODERN SPECIES 7 PLEKHA7 (ENSPCTG00005014003) #10 ENSPCTG00005013965 C16H11orf58 (ENSPCTG00005013885) #11 SOX6 (ENSPCTG00005013480) #12 INSC (ENSPCTG00005013109) #14 ENSPCTG00005012995 #15 ENSPCTG00005012923 #15 ENSPCTG00005012901 ENSPCTG00005012814 #15 CYP2R1 (ENSPCTG00005012742) #17 ENSPCTG00005012726 ENSPCTG00005012691 PDE3B (ENSPCTG00005012346) #19 PSMA1 (ENSPCTG00005012167) #20 COPB1 (ENSPCTG00005012104) #21 RRAS2 (ENSPCTG00005012007) #22 SPON1 (ENSPCTG00005011836) #23 FAR1 (ENSPCTG00005011756) #24 PTH (ENSPCTG00005011723) #25 BTBD10 (ENSPCTG00005011536) #26 ARNTL (ENSPCTG00005011154) #27 RASSF10 (ENSPCTG00005011126) #28 ENSPCTG00005011111 PARVA (ENSPCTG00005010894) #31 MICAL2 (ENSPCTG00005010521) #33 ENSPCTG00005010379 ENSPCTG00005010334 DKK3 (ENSPCTG00005010287) #34 USP47 (ENSPCTG00005009618) #35 ENSPCTG00005009485 GALNT18 (ENSPCTG00005009456) #36 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00390000017491.t.u.r ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000167952 ENSGT00940000156267.eb #15 ENSGT00940000156267.db.a #15 ENSGT00940000166205.a.e ENSGT00940000156267.db.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l.a #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 ENSGT00940000154675 ENSGT00390000005097 Dolphin MODERN SPECIES 1096 RRAS2 (ENSTTRG00000010419) #22 SPON1 (ENSTTRG00000010416) #23 Odontoceti_b DUPLICATION Odontoceti_b DUPLICATION Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000153352.A ENSGT00940000163559 ENSGT00490000043395 ENSGT00730000110989 ENSGT00940000155771 ENSGT00440000039046 ENSGT00390000015930.cb ENSGT00940000155097 ENSGT00390000015930.bb ENSGT00440000039958 ENSGT00940000155179 ENSGT00390000017443.m.b ENSGT00390000009578 ENSGT00940000154586.h ENSGT00940000155754 ENSGT00940000155328.bb.a #22 ENSGT00940000155553 ENSGT00940000161183 ENSGT00940000156399 ENSGT00730000110872.a ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000161841.i.b ENSGT00940000158562 ENSGT00940000158733 ENSGT00390000006243 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 Monodontidae ANCESTRAL SPECIES 7 ENSGT00390000012762 ENSGT00940000161793 ENSGT00940000153352.A ENSGT00940000163559 ENSGT00490000043395 ENSGT00730000110989 ENSGT00940000155771 ENSGT00440000039046 ENSGT00390000015930.cb ENSGT00440000039958 ENSGT00940000155179 ENSGT00390000017443.m.b ENSGT00390000009578 ENSGT00940000154586.h ENSGT00940000155754 ENSGT00940000155328.bb.a #22 ENSGT00940000155553 ENSGT00940000161183 ENSGT00940000156399 ENSGT00730000110872.a ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000161841.i.b ENSGT00940000158562 ENSGT00940000158733 ENSGT00390000006243 ENSGT00940000156571 ENSGT00940000155967 ENSGT00510000047710 Narwhal MODERN SPECIES 298 BDP1 (ENSMMNG00015006135) ENSMMNG00015006081 ENSMMNG00015006037 NAIP (ENSMMNG00015005961) ENSMMNG00015005913 OCLN (ENSMMNG00015005875) MARVELD2 (ENSMMNG00015005846) RAD17 (ENSMMNG00015005743) AK6 (ENSMMNG00015005657) CCDC125 (ENSMMNG00015005603) CDK7 (ENSMMNG00015005554) ENSMMNG00015005507 CENPH (ENSMMNG00015005488) ENSMMNG00015005463 SLC30A5 (ENSMMNG00015005435) ENSMMNG00015004596 #22 PIK3R1 (ENSMMNG00015004568) CD180 (ENSMMNG00015004542) MAST4 (ENSMMNG00015004481) SREK1 (ENSMMNG00015004387) ERBIN (ENSMMNG00015004235) NLN (ENSMMNG00015004142) SGTB (ENSMMNG00015004126) TRAPPC13 (ENSMMNG00015004075) ENSMMNG00015004041 TRIM23 (ENSMMNG00015004015) PPWD1 (ENSMMNG00015003985) CENPK (ENSMMNG00015003940) ADAMTS6 (ENSMMNG00015003893) CWC27 (ENSMMNG00015003854) SREK1IP1 (ENSMMNG00015003834) Beluga whale MODERN SPECIES 71 MCCC2 (ENSDLEG00000010734) BDP1 (ENSDLEG00000010830) ENSDLEG00000011593 NAIP (ENSDLEG00000011638) ENSDLEG00000011655 OCLN (ENSDLEG00000011679) MARVELD2 (ENSDLEG00000011703) RAD17 (ENSDLEG00000011738) AK6 (ENSDLEG00000011769) CCDC125 (ENSDLEG00000011814) CDK7 (ENSDLEG00000011834) ENSDLEG00000011858 CENPH (ENSDLEG00000011868) CCNB1 (ENSDLEG00000011902) SLC30A5 (ENSDLEG00000011939) ENSDLEG00000011968 #22 PIK3R1 (ENSDLEG00000011992) ENSDLEG00000012076 CD180 (ENSDLEG00000012086) MAST4 (ENSDLEG00000012105) SREK1 (ENSDLEG00000012261) ENSDLEG00000012284 ERBIN (ENSDLEG00000012319) NLN (ENSDLEG00000012509) SGTB (ENSDLEG00000012523) TRAPPC13 (ENSDLEG00000012547) TRIM23 (ENSDLEG00000012593) ENSDLEG00000012607 PPWD1 (ENSDLEG00000012628) CENPK (ENSDLEG00000012642) ENSDLEG00000012652 Vaquita MODERN SPECIES 14 ENSPSNG00000007675 ENSPSNG00000007752 NAIP (ENSPSNG00000007844) ENSPSNG00000008003 OCLN (ENSPSNG00000008068) MARVELD2 (ENSPSNG00000008132) RAD17 (ENSPSNG00000008246) ENSPSNG00000008374 TAF9 (ENSPSNG00000008465) CCDC125 (ENSPSNG00000008496) CDK7 (ENSPSNG00000008636) ENSPSNG00000008713 CENPH (ENSPSNG00000008757) ENSPSNG00000008796 SLC30A5 (ENSPSNG00000008835) ENSPSNG00000008887 #22 PIK3R1 (ENSPSNG00000008942) CD180 (ENSPSNG00000009061) MAST4 (ENSPSNG00000009145) SREK1 (ENSPSNG00000009349) ENSPSNG00000009525 ERBIN (ENSPSNG00000009649) NLN (ENSPSNG00000010023) ENSPSNG00000010119 TRAPPC13 (ENSPSNG00000010186) TRIM23 (ENSPSNG00000010309) PPWD1 (ENSPSNG00000010412) CENPK (ENSPSNG00000010494) ADAMTS6 (ENSPSNG00000010656) ENSPSNG00000010806 CWC27 (ENSPSNG00000010826) Odontoceti_b ANCESTRAL SPECIES ENSGT00940000155328.bb.b #22 Vaquita MODERN SPECIES 14 TMEM161B (ENSPSNG00000002519) ENSPSNG00000002482 MEF2C (ENSPSNG00000002155) CETN3 (ENSPSNG00000001948) ENSPSNG00000001923 MBLAC2 (ENSPSNG00000001913) ENSPSNG00000001891 LYSMD3 (ENSPSNG00000001854) ADGRV1 (ENSPSNG00000001637) ARRDC3 (ENSPSNG00000001549) ENSPSNG00000001530 ENSPSNG00000001514 NR2F1 (ENSPSNG00000001479) ENSPSNG00000001456 FAM172A (ENSPSNG00000001390) ENSPSNG00000001316 #22 KIAA0825 (ENSPSNG00000001276) SLF1 (ENSPSNG00000001198) MCTP1 (ENSPSNG00000000848) ENSPSNG00000000626 FAM81B (ENSPSNG00000000605) SKIC3 (ENSPSNG00000000523) ARSK (ENSPSNG00000000382) GPR150 (ENSPSNG00000000363) RFESD (ENSPSNG00000000304) RHOBTB3 (ENSPSNG00000000248) ENSPSNG00000000178 ELL2 (ENSPSNG00000000102) PCSK1 (ENSPSNG00000003059) CAST (ENSPSNG00000002825) ERAP1 (ENSPSNG00000002640) Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000167952 ENSGT00940000156267.eb #15 ENSGT00940000156267.db.a #15 ENSGT00940000166205.a.e ENSGT00940000156267.db.b #15 ENSGT00940000158305 #17 ENSGT00390000000378.d.b.gb ENSGT00940000153169.A.b.b.a.a.a.b.l ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.cb #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00950000182922.a.a.a.b.a.b.a.b.a ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l.a #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000018433.s.b ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Vaquita MODERN SPECIES 19 PIK3C2A (ENSPSNG00000006633) PLEKHA7 (ENSPSNG00000006504) #10 C11orf58 (ENSPSNG00000006414) #11 SOX6 (ENSPSNG00000006212) #12 INSC (ENSPSNG00000005971) #14 ENSPSNG00000005882 #15 ENSPSNG00000005847 #15 ENSPSNG00000005826 ENSPSNG00000005789 #15 CYP2R1 (ENSPSNG00000005748) #17 ENSPSNG00000005725 ENSPSNG00000005706 PDE3B (ENSPSNG00000005620) #19 PSMA1 (ENSPSNG00000005548) #20 COPB1 (ENSPSNG00000005475) #21 ENSPSNG00000005427 #22 SPON1 (ENSPSNG00000005398) #23 FAR1 (ENSPSNG00000005352) #24 ENSPSNG00000005319 PTH (ENSPSNG00000005298) #25 BTBD10 (ENSPSNG00000005248) #26 BMAL1 (ENSPSNG00000005165) #27 RASSF10 (ENSPSNG00000005115) #28 ENSPSNG00000005077 #29 PARVA (ENSPSNG00000005015) #31 MICAL2 (ENSPSNG00000004843) #33 ENSPSNG00000004681 DKK3 (ENSPSNG00000004657) #34 USP47 (ENSPSNG00000004502) #35 ENSPSNG00000004358 GALNT18 (ENSPSNG00000004318) #36 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000018086.y.b.b ENSGT00390000001511 #14 ENSGT00940000167380 ENSGT00940000166205.b ENSGT00940000167952 ENSGT00940000166205.a.e ENSGT00940000156267.db.b #15 ENSGT00940000158305 #17 ENSGT00390000000378.d.b.gb ENSGT00940000153169.A.b.b.a.a.a.b.l ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328.cb #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00950000182922.a.a.a.b.a.b.a.b.a ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l.a #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000018433.s.b ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000162521 #37 Beluga whale MODERN SPECIES 32 CUNH11orf58 (ENSDLEG00000005498) #11 SOX6 (ENSDLEG00000005509) #12 ENSDLEG00000005557 INSC (ENSDLEG00000005606) #14 ENSDLEG00000005632 #15 ENSDLEG00000005645 ENSDLEG00000005660 ENSDLEG00000005668 ENSDLEG00000005674 #15 CYP2R1 (ENSDLEG00000005681) #17 PDE3B (ENSDLEG00000005717) #19 ENSDLEG00000005733 ENSDLEG00000005736 PSMA1 (ENSDLEG00000005746) #20 COPB1 (ENSDLEG00000005761) #21 RRAS2 (ENSDLEG00000005779) #22 SPON1 (ENSDLEG00000005782) #23 FAR1 (ENSDLEG00000005790) #24 ENSDLEG00000005799 PTH (ENSDLEG00000005808) #25 BTBD10 (ENSDLEG00000005823) #26 ARNTL (ENSDLEG00000005839) #27 RASSF10 (ENSDLEG00000005856) #28 TEAD1 (ENSDLEG00000005889) #29 PARVA (ENSDLEG00000005943) #31 MICAL2 (ENSDLEG00000006015) #33 ENSDLEG00000006212 DKK3 (ENSDLEG00000006216) #34 USP47 (ENSDLEG00000006227) #35 GALNT18 (ENSDLEG00000006263) #36 ENSDLEG00000006268 Narwhal DUPLICATION Narwhal MODERN SPECIES 314 C11orf58 (ENSMMNG00015021280) #11 SOX6 (ENSMMNG00015021242) #12 ENSMMNG00015021215 INSC (ENSMMNG00015021164) #14 ENSMMNG00015021136 ENSMMNG00015021124 ENSMMNG00015021119 ENSMMNG00015021104 ENSMMNG00015021083 #15 CYP2R1 (ENSMMNG00015021059) #17 ENSMMNG00015021043 ENSMMNG00015021034 PDE3B (ENSMMNG00015020953) #19 PSMA1 (ENSMMNG00015020868) #20 COPB1 (ENSMMNG00015020824) #21 ENSMMNG00015020802 #22 SPON1 (ENSMMNG00015020782) #23 FAR1 (ENSMMNG00015020761) #24 ENSMMNG00015020752 PTH (ENSMMNG00015020742) #25 BTBD10 (ENSMMNG00015020698) #26 BMAL1 (ENSMMNG00015020613) #27 RASSF10 (ENSMMNG00015020589) #28 TEAD1 (ENSMMNG00015020545) #29 PARVA (ENSMMNG00015020501) #31 MICAL2 (ENSMMNG00015020388) #33 ENSMMNG00015020342 DKK3 (ENSMMNG00015020327) #34 USP47 (ENSMMNG00015020112) #35 ENSMMNG00015020000 ENSMMNG00015019981 Narwhal MODERN SPECIES 311 ENSMMNG00015021602 SLC25A28 (ENSMMNG00015021609) ENTPD7 (ENSMMNG00015021616) COX15 (ENSMMNG00015021631) CUTC (ENSMMNG00015021646) ABCC2 (ENSMMNG00015021666) DNMBP (ENSMMNG00015021703) ENSMMNG00015021741 CPN1 (ENSMMNG00015021745) ENSMMNG00015021751 ENSMMNG00015021772 ERLIN1 (ENSMMNG00015021807) CHUK (ENSMMNG00015021819) CWF19L1 (ENSMMNG00015021829) BLOC1S2 (ENSMMNG00015021848) ENSMMNG00015021861 #22 SCD (ENSMMNG00015021869) WNT8B (ENSMMNG00015021879) NDUFB8 (ENSMMNG00015021899) HIF1AN (ENSMMNG00015021902) ENSMMNG00015012209 SLF2 (ENSMMNG00015012230) SEMA4G (ENSMMNG00015012260) MRPL43 (ENSMMNG00015012273) TWNK (ENSMMNG00015012283) LZTS2 (ENSMMNG00015012307) PDZD7 (ENSMMNG00015012332) SFXN3 (ENSMMNG00015012374) KAZALD1 (ENSMMNG00015012419) TLX1 (ENSMMNG00015012435) ENSMMNG00015012448 Camelidae ANCESTRAL SPECIES 25 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.u ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000166205.a ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 ENSGT00530000063722.b ENSGT00530000063822.a.b Alpaca MODERN SPECIES 2653 CYP2R1 (ENSVPAG00000008822) #17 PDE3B (ENSVPAG00000008821) #19 PSMA1 (ENSVPAG00000008820) #20 COPB1 (ENSVPAG00000008816) #21 RRAS2 (ENSVPAG00000008814) #22 SPON1 (ENSVPAG00000008812) #23 FAR1 (ENSVPAG00000008809) #24 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 31 SPATS2L (ENSCDRG00005009592) KCTD18 (ENSCDRG00005009496) ENSCDRG00005009460 ENSCDRG00005009409 AOX1 (ENSCDRG00005009121) ENSCDRG00005008740 ENSCDRG00005008482 BZW1 (ENSCDRG00005008038) CLK1 (ENSCDRG00005007272) PPIL3 (ENSCDRG00005007234) NIF3L1 (ENSCDRG00005007147) ORC2 (ENSCDRG00005007036) HYCC2 (ENSCDRG00005006918) ENSCDRG00005006864 CFLAR (ENSCDRG00005006763) ENSCDRG00005006679 #22 CASP10 (ENSCDRG00005006612) CASP8 (ENSCDRG00005006441) FLACC1 (ENSCDRG00005006384) TRAK2 (ENSCDRG00005021447) STRADB (ENSCDRG00005021435) ENSCDRG00005021425 TMEM237 (ENSCDRG00005021415) MPP4 (ENSCDRG00005019977) ALS2 (ENSCDRG00005019833) CDK15 (ENSCDRG00005019534) FZD7 (ENSCDRG00005019516) KIAA2012 (ENSCDRG00005019503) SUMO1 (ENSCDRG00005019446) NOP58 (ENSCDRG00005019373) ENSCDRG00005019360 Arabian camel MODERN SPECIES 1 PIK3C2A (ENSCDRG00005015424) RPS13 (ENSCDRG00005015649) ##8 PLEKHA7 (ENSCDRG00005015761) #10 C11orf58 (ENSCDRG00005016004) #11 SOX6 (ENSCDRG00005016113) #12 INSC (ENSCDRG00005016735) #14 ENSCDRG00005017047 #15 ENSCDRG00005017091 #15 ENSCDRG00005017126 #15 ENSCDRG00005017138 CYP2R1 (ENSCDRG00005017151) #17 PDE3B (ENSCDRG00005017202) #19 ENSCDRG00005017368 PSMA1 (ENSCDRG00005017399) #20 COPB1 (ENSCDRG00005017432) #21 ENSCDRG00005017514 #22 SPON1 (ENSCDRG00005017555) #23 FAR1 (ENSCDRG00005017647) #24 PTH (ENSCDRG00005017750) #25 BTBD10 (ENSCDRG00005017807) #26 BMAL1 (ENSCDRG00005018014) #27 TEAD1 (ENSCDRG00005018251) #29 PARVA (ENSCDRG00005018726) #31 MICAL2 (ENSCDRG00005018951) #33 DKK3 (ENSCDRG00005019246) #34 USP47 (ENSCDRG00005019301) #35 GALNT18 (ENSCDRG00005019515) #36 EIF4G2 (ENSCDRG00005019554) CTR9 (ENSCDRG00005019577) IRAG1 (ENSCDRG00005006595) LYVE1 (ENSCDRG00005006855) Atlantogenata ANCESTRAL SPECIES 13 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Afrotheria ANCESTRAL SPECIES 16 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Afrotheria_a ANCESTRAL SPECIES 17 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000162876 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 ENSGT00950000182956.b.b.a.a.c.a.l #29 ENSGT00950000183194.a.b #31 ENSGT00940000162628 #32 ENSGT00940000158780 #33 ENSGT00390000000221.A #34 ENSGT00940000157223 #35 ENSGT00940000155456 #36 ENSGT00940000154675 ENSGT00390000005097 Elephant MODERN SPECIES 209 KCNJ11 (ENSLAFG00000031878) NUCB2 (ENSLAFG00000007349) PIK3C2A (ENSLAFG00000003710) RPS13 (ENSLAFG00000026881) ##8 PLEKHA7 (ENSLAFG00000007609) #10 C11orf58 (ENSLAFG00000007606) #11 SOX6 (ENSLAFG00000002917) #12 INSC (ENSLAFG00000005686) #14 ENSLAFG00000015843 ENSLAFG00000003276 #15 CYP2R1 (ENSLAFG00000005356) #17 PDE3B (ENSLAFG00000008453) #19 ENSLAFG00000027121 PSMA1 (ENSLAFG00000006165) #20 COPB1 (ENSLAFG00000006159) #21 RRAS2 (ENSLAFG00000002561) #22 SPON1 (ENSLAFG00000002558) #23 FAR1 (ENSLAFG00000000971) #24 PTH (ENSLAFG00000028790) #25 BTBD10 (ENSLAFG00000017180) #26 BMAL1 (ENSLAFG00000026673) #27 RASSF10 (ENSLAFG00000007284) #28 TEAD1 (ENSLAFG00000016484) #29 PARVA (ENSLAFG00000011464) #31 ENSLAFG00000026524 #32 MICAL2 (ENSLAFG00000003577) #33 DKK3 (ENSLAFG00000004463) #34 USP47 (ENSLAFG00000004453) #35 GALNT18 (ENSLAFG00000014130) #36 EIF4G2 (ENSLAFG00000012814) CTR9 (ENSLAFG00000012801) Tenrec MODERN SPECIES 4588 RRAS2 (ENSETEG00000017987) #22 SPON1 (ENSETEG00000017986) #23 Xenarthra ANCESTRAL SPECIES 199 ENSGT00940000157813 ENSGT00390000017491.t.a ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.c #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000154910.b.b #23 ENSGT00390000006367.d #24 ENSGT00390000018603 #25 ENSGT00390000007975.a #26 ENSGT00940000157523 #27 ENSGT00950000182839.A.d #28 Sloth MODERN SPECIES 2629 ENSCHOG00000003135 #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3011 GLIPR1 (ENSDNOG00000043370) KRR1 (ENSDNOG00000015614) PHLDA1 (ENSDNOG00000018745) NAP1L1 (ENSDNOG00000010126) BBS10 (ENSDNOG00000042628) OSBPL8 (ENSDNOG00000047010) ZDHHC17 (ENSDNOG00000014749) ENSDNOG00000008785 E2F7 (ENSDNOG00000001580) ENSDNOG00000048320 ENSDNOG00000042472 NAV3 (ENSDNOG00000005668) SYT1 (ENSDNOG00000032547) ENSDNOG00000031221 ENSDNOG00000015540 ENSDNOG00000041480 #22 Armadillo MODERN SPECIES 2958 NUCB2 (ENSDNOG00000006914) ENSDNOG00000037135 ENSDNOG00000041453 PIK3C2A (ENSDNOG00000018025) ENSDNOG00000038925 ##8 PLEKHA7 (ENSDNOG00000000399) #10 ENSDNOG00000037449 #11 SOX6 (ENSDNOG00000004344) #12 INSC (ENSDNOG00000012392) #14 ENSDNOG00000018612 #15 ENSDNOG00000017915 #15 CYP2R1 (ENSDNOG00000025774) #17 PDE3B (ENSDNOG00000006062) #19 ENSDNOG00000049634 COPB1 (ENSDNOG00000018754) #21 ENSDNOG00000011828 #22 SPON1 (ENSDNOG00000011819) #23 FAR1 (ENSDNOG00000002552) #24 ENSDNOG00000043297 PTH (ENSDNOG00000003272) #25 BTBD10 (ENSDNOG00000003854) #26 BMAL1 (ENSDNOG00000003841) #27 RASSF10 (ENSDNOG00000031556) #28 ENSDNOG00000032396 TEAD1 (ENSDNOG00000015235) #29 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.a.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000004737.b.a.o.b.b.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.b #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.a.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a.w ENSGT00950000182999.b.a.b ENSGT00390000004737.b.a.o.b.a ENSGT00390000004737.b.a.o.b.b.b ENSGT00940000153185.a.b Tasmanian devil MODERN SPECIES 5 ABCC8 (ENSSHAG00000017597) KCNJ11 (ENSSHAG00000022074) ENSSHAG00000028371 PIK3C2A (ENSSHAG00000001008) RPS13 (ENSSHAG00000004052) ##8 PLEKHA7 (ENSSHAG00000007139) #10 ENSSHAG00000008106 #11 SOX6 (ENSSHAG00000006502) #12 ENSSHAG00000028264 INSC (ENSSHAG00000014350) #14 ENSSHAG00000025195 #15 CYP2R1 (ENSSHAG00000014886) #17 PDE3B (ENSSHAG00000014935) #19 PSMA1 (ENSSHAG00000025274) #20 COPB1 (ENSSHAG00000015683) #21 ENSSHAG00000016060 #22 ENSSHAG00000016289 ENSSHAG00000016461 LMO1 (ENSSHAG00000016707) ENSSHAG00000017222 TRIM66 (ENSSHAG00000017621) RPL27A (ENSSHAG00000020614) DENND2B (ENSSHAG00000030668) ENSSHAG00000018084 ASCL3 (ENSSHAG00000030483) TMEM9B (ENSSHAG00000025702) NRIP3 (ENSSHAG00000022913) ENSSHAG00000020821 ENSSHAG00000018210 SCUBE2 (ENSSHAG00000018253) DENND5A (ENSSHAG00000018360) Diprotodontia ANCESTRAL SPECIES 10 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.b #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.a.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a.w ENSGT00950000182999.b.a.b ENSGT00390000004737.b.a.o.b.a ENSGT00940000153185.a.b ENSGT00940000153678.a.b Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e.f ENSGT00940000163348.e.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491.t.w ##8 ENSGT00940000155817.a.a #10 ENSGT00390000000687.b #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.a.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a.w ENSGT00950000182999.b.a.b ENSGT00390000004737.b.a.o.b.a ENSGT00940000153185.a.b ENSGT00940000153678.a.b koala MODERN SPECIES 108 ABCC8 (ENSPCIG00000013643) ENSPCIG00000013127 ENSPCIG00000035386 NUCB2 (ENSPCIG00000013631) PIK3C2A (ENSPCIG00000013619) ENSPCIG00000013612 ##8 PLEKHA7 (ENSPCIG00000021403) #10 C11orf58 (ENSPCIG00000021388) #11 SOX6 (ENSPCIG00000021385) #12 INSC (ENSPCIG00000010520) #14 ENSPCIG00000010519 #15 CYP2R1 (ENSPCIG00000010518) #17 PDE3B (ENSPCIG00000034172) #19 PSMA1 (ENSPCIG00000010513) #20 COPB1 (ENSPCIG00000010506) #21 RRAS2 (ENSPCIG00000010498) #22 TUB (ENSPCIG00000010496) RIC3 (ENSPCIG00000010494) ENSPCIG00000010493 Common wonbat MODERN SPECIES 608 ENSVURG00010006183 NUCB2 (ENSVURG00010006037) PIK3C2A (ENSVURG00010005972) RPS13 (ENSVURG00010005940) ##8 PLEKHA7 (ENSVURG00010005891) #10 C11orf58 (ENSVURG00010005869) #11 SOX6 (ENSVURG00010005847) #12 INSC (ENSVURG00010005781) #14 ENSVURG00010005761 ENSVURG00010005754 #15 CYP2R1 (ENSVURG00010005688) #17 ENSVURG00010005620 #19 ENSVURG00010005600 PSMA1 (ENSVURG00010005585) #20 COPB1 (ENSVURG00010005577) #21 RRAS2 (ENSVURG00010005535) #22 TUB (ENSVURG00010005392) RIC3 (ENSVURG00010005364) LMO1 (ENSVURG00010005360) ENSVURG00010005339 TRIM66 (ENSVURG00010005315) ENSVURG00010005279 DENND2B (ENSVURG00010005170) ENSVURG00010005125 ENSVURG00010005118 ASCL3 (ENSVURG00010005106) ENSVURG00010005082 NRIP3 (ENSVURG00010005051) ENSVURG00010005037 SCUBE2 (ENSVURG00010004812) DENND5A (ENSVURG00010004754) Opossum DUPLICATION Opossum DUPLICATION Opossum MODERN SPECIES ENSMODG00000046749 ENSMODG00000028081 FBXO38 (ENSMODG00000005613) HTR4 (ENSMODG00000005643) ADRB2 (ENSMODG00000005650) SH3TC2 (ENSMODG00000005679) ENSMODG00000005706 AFAP1L1 (ENSMODG00000005760) GRPEL2 (ENSMODG00000005775) ENSMODG00000040849 PCYOX1L (ENSMODG00000005809) IL17B (ENSMODG00000005817) JAKMIP2 (ENSMODG00000005857) ENSMODG00000005887 DRD1 (ENSMODG00000023683) ENSMODG00000040970 #22 MSX2 (ENSMODG00000005933) ENSMODG00000023086 ENSMODG00000006007 CPEB4 (ENSMODG00000006036) ENSMODG00000006047 STC2 (ENSMODG00000006146) NKX2-5 (ENSMODG00000006154) BNIP1 (ENSMODG00000044680) CREBRF (ENSMODG00000006184) ATP6V0E1 (ENSMODG00000044657) ENSMODG00000006201 ERGIC1 (ENSMODG00000006214) DUSP1 (ENSMODG00000050204) NEURL1B (ENSMODG00000006234) SH3PXD2B (ENSMODG00000006308) Opossum MODERN SPECIES ENSMODG00000043097 SALL1 (ENSMODG00000013114) CYLD (ENSMODG00000013111) NOD2 (ENSMODG00000013087) SNX20 (ENSMODG00000013071) NKD1 (ENSMODG00000013068) ENSMODG00000013057 ADCY7 (ENSMODG00000013047) TENT4B (ENSMODG00000013026) HEATR3 (ENSMODG00000013019) CNEP1R1 (ENSMODG00000048858) ENSMODG00000028787 ZNF423 (ENSMODG00000012988) ENSMODG00000044145 CBLN1 (ENSMODG00000012983) ENSMODG00000037529 #22 ENSMODG00000012970 SIAH1 (ENSMODG00000012963) LONP2 (ENSMODG00000012957) ABCC11 (ENSMODG00000029131) ABCC12 (ENSMODG00000012914) ENSMODG00000043051 PHKB (ENSMODG00000012900) NETO2 (ENSMODG00000012864) ITFG1 (ENSMODG00000012883) DNAJA2 (ENSMODG00000012845) GPT2 (ENSMODG00000012837) C16orf87 (ENSMODG00000012820) MYLK3 (ENSMODG00000012813) ORC6 (ENSMODG00000012795) VPS35 (ENSMODG00000012784) Opossum MODERN SPECIES 4 KCNJ11 (ENSMODG00000007004) NUCB2 (ENSMODG00000007015) ENSMODG00000007062 RPS13 (ENSMODG00000007078) ##8 PLEKHA7 (ENSMODG00000007138) #10 C11orf58 (ENSMODG00000043387) #11 SOX6 (ENSMODG00000007224) #12 ENSMODG00000029280 ENSMODG00000024593 INSC (ENSMODG00000007236) #14 CYP2R1 (ENSMODG00000007273) #17 PDE3B (ENSMODG00000007280) #19 ENSMODG00000007288 PSMA1 (ENSMODG00000007303) #20 COPB1 (ENSMODG00000007335) #21 ENSMODG00000043697 #22 TUB (ENSMODG00000007360) RIC3 (ENSMODG00000007371) LMO1 (ENSMODG00000007385) STK33 (ENSMODG00000007414) TRIM66 (ENSMODG00000007442) ENSMODG00000007480 DENND2B (ENSMODG00000007524) ENSMODG00000025551 ENSMODG00000007534 ASCL3 (ENSMODG00000024589) TMEM9B (ENSMODG00000007544) NRIP3 (ENSMODG00000046266) ENSMODG00000007579 SCUBE2 (ENSMODG00000007737) DENND5A (ENSMODG00000007790) Platypus MODERN SPECIES 14 ENSOANG00000045336 NUCB2 (ENSOANG00000007683) PIK3C2A (ENSOANG00000007685) RPS13 (ENSOANG00000007687) #8 PLEKHA7 (ENSOANG00000007688) #10 C11orf58 (ENSOANG00000036260) #11 ENSOANG00000050997 ENSOANG00000022345 #12 ENSOANG00000001353 INSC (ENSOANG00000030687) #14 ENSOANG00000041034 #15 CYP2R1 (ENSOANG00000006368) #17 PDE3B (ENSOANG00000032034) #19 PSMA1 (ENSOANG00000006654) #20 COPB1 (ENSOANG00000006884) #21 RRAS2 (ENSOANG00000012470) #22 TUB (ENSOANG00000009946) RIC3 (ENSOANG00000009944) ENSOANG00000029211 ENSOANG00000020955 TRIM66 (ENSOANG00000038977) ENSOANG00000004644 ENSOANG00000006440 DENND2B (ENSOANG00000006442) ENSOANG00000003111 ENSOANG00000045876 ASCL3 (ENSOANG00000003112) TMEM9B (ENSOANG00000003113) NRIP3 (ENSOANG00000037610) SCUBE2 (ENSOANG00000003115) DENND5A (ENSOANG00000003117) Sauria ANCESTRAL SPECIES 3 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00940000175801.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Archelosauria ANCESTRAL SPECIES 2 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Cryptodira ANCESTRAL SPECIES 3 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00390000014476.b ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Testudinoidea ANCESTRAL SPECIES 3 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e.g.b ENSGT00940000163348.e.g.a ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.e.a.b ENSGT00390000005534.b.e.a.a ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00390000014476.b ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b Emydidae ANCESTRAL SPECIES 10 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e.g.b ENSGT00940000163348.e.g.a ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.e.a.b ENSGT00390000005534.b.e.a.a ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b Three-toed box turtle MODERN SPECIES 40 GAL (ENSTMTG00000001271) NUCB2 (ENSTMTG00000001287) PIK3C2A (ENSTMTG00000001306) RPS13 (ENSTMTG00000001339) #8 PLEKHA7 (ENSTMTG00000001364) #10 C11orf58 (ENSTMTG00000001431) #11 SOX6 (ENSTMTG00000001456) #12 INSC (ENSTMTG00000001576) #14 CALCB (ENSTMTG00000001667) #15 CYP2R1 (ENSTMTG00000001677) #17 PDE3B (ENSTMTG00000001689) #19 PSMA1 (ENSTMTG00000001705) #20 COPB1 (ENSTMTG00000001716) #21 RRAS2 (ENSTMTG00000001729) #22 TUB (ENSTMTG00000001732) RIC3 (ENSTMTG00000001741) ENSTMTG00000001748 STK33 (ENSTMTG00000001752) TRIM66 (ENSTMTG00000001764) ENSTMTG00000001796 ENSTMTG00000001810 DENND2B (ENSTMTG00000001845) AKIP1 (ENSTMTG00000001900) C11orf16 (ENSTMTG00000001909) ASCL3 (ENSTMTG00000001917) TMEM9B (ENSTMTG00000001923) NRIP3 (ENSTMTG00000001933) SCUBE2 (ENSTMTG00000001954) DENND5A (ENSTMTG00000001972) painted turtle MODERN SPECIES 2408 PSMA1 (ENSCPBG00000022713) #20 COPB1 (ENSCPBG00000022716) #21 RRAS2 (ENSCPBG00000022721) #22 ENSCPBG00000022723 TUB (ENSCPBG00000022725) RIC3 (ENSCPBG00000022733) ENSCPBG00000022745 TRIM66 (ENSCPBG00000022765) ENSCPBG00000022774 ENSCPBG00000022783 DENND2B (ENSCPBG00000022790) AKIP1 (ENSCPBG00000022797) ENSCPBG00000022800 ASCL3 (ENSCPBG00000022805) TMEM9B (ENSCPBG00000022806) ENSCPBG00000022809 NRIP3 (ENSCPBG00000022811) ENSCPBG00000022814 Testudinidae ANCESTRAL SPECIES 2 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e.g.b ENSGT00940000163348.e.g.a ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.e.a.b ENSGT00390000005534.b.e.a.a ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00390000014476.b ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b Goode s thornscrub tortoise MODERN SPECIES 18 ABCC8 (ENSGEVG00005008865) KCNJ11 (ENSGEVG00005008823) ENSGEVG00005008800 NUCB2 (ENSGEVG00005008771) PIK3C2A (ENSGEVG00005008680) RPS13 (ENSGEVG00005008637) #8 PLEKHA7 (ENSGEVG00005008609) #10 C11orf58 (ENSGEVG00005008546) #11 SOX6 (ENSGEVG00005008506) #12 INSC (ENSGEVG00005008452) #14 CALCB (ENSGEVG00005008406) #15 CYP2R1 (ENSGEVG00005008389) #17 PDE3B (ENSGEVG00005008333) #19 PSMA1 (ENSGEVG00005008235) #20 COPB1 (ENSGEVG00005008193) #21 RRAS2 (ENSGEVG00005008163) #22 TUB (ENSGEVG00005008123) RIC3 (ENSGEVG00005008106) ENSGEVG00005008077 STK33 (ENSGEVG00005008025) TRIM66 (ENSGEVG00005007913) ENSGEVG00005007829 ENSGEVG00005005577 ENSGEVG00005005542 ENSGEVG00005005501 AKIP1 (ENSGEVG00005005473) C11orf16 (ENSGEVG00005005442) ASCL3 (ENSGEVG00005005433) TMEM9B (ENSGEVG00005005422) ENSGEVG00005005408 NRIP3 (ENSGEVG00005005360) Abingdon island giant tortoise MODERN SPECIES 2592 ENSCABG00000017699 #19 PSMA1 (ENSCABG00000017701) #20 COPB1 (ENSCABG00000017705) #21 RRAS2 (ENSCABG00000017710) #22 Chinese turtle MODERN SPECIES 1289 PSMA1 (ENSPSIG00000013946) #20 COPB1 (ENSPSIG00000014124) #21 RRAS2 (ENSPSIG00000015164) #22 TUB (ENSPSIG00000015249) RIC3 (ENSPSIG00000015262) ENSPSIG00000015675 Archosauria ANCESTRAL SPECIES 5 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Aves ANCESTRAL SPECIES 2 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 Neognathae ANCESTRAL SPECIES 4 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 Neognathae_b ANCESTRAL SPECIES 14 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 Passeriformes ANCESTRAL SPECIES 5 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584 Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584 Flycatcher MODERN SPECIES 24 USH1C (ENSFALG00000000770) ABCC8 (ENSFALG00000000775) KCNJ11 (ENSFALG00000014605) NUCB2 (ENSFALG00000000778) PIK3C2A (ENSFALG00000000780) RPS13 (ENSFALG00000000784) #8 PLEKHA7 (ENSFALG00000000789) #10 C11orf58 (ENSFALG00000026715) #11 SOX6 (ENSFALG00000000798) #12 INSC (ENSFALG00000000814) #14 CALCB (ENSFALG00000024809) #15 CYP2R1 (ENSFALG00000000820) #17 PDE3B (ENSFALG00000000827) #19 PSMA1 (ENSFALG00000000841) #20 COPB1 (ENSFALG00000000867) #21 RRAS2 (ENSFALG00000000889) #22 TUB (ENSFALG00000000897) ENSFALG00000023361 ENSFALG00000000908 ENSFALG00000024346 ENSFALG00000026371 TRIM66 (ENSFALG00000000917) ENSFALG00000000924 DENND2B (ENSFALG00000000927) ENSFALG00000026057 ASCL3 (ENSFALG00000014620) TMEM9B (ENSFALG00000027488) NRIP3 (ENSFALG00000000939) SCUBE2 (ENSFALG00000000945) DENND5A (ENSFALG00000000958) TMEM41B (ENSFALG00000000976) Passeriformes_g ANCESTRAL SPECIES ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584 Medium ground finch MODERN SPECIES 113 USH1C (ENSGFOG00000014191) ABCC8 (ENSGFOG00000009786) KCNJ11 (ENSGFOG00000009487) NUCB2 (ENSGFOG00000009474) PIK3C2A (ENSGFOG00000009443) RPS13 (ENSGFOG00000009433) #8 PLEKHA7 (ENSGFOG00000009416) #10 C11orf58 (ENSGFOG00000009400) #11 SOX6 (ENSGFOG00000009373) #12 INSC (ENSGFOG00000009330) #14 CALCB (ENSGFOG00000009314) #15 CYP2R1 (ENSGFOG00000009306) #17 PDE3B (ENSGFOG00000009185) #19 PSMA1 (ENSGFOG00000009164) #20 COPB1 (ENSGFOG00000009147) #21 RRAS2 (ENSGFOG00000009135) #22 TUB (ENSGFOG00000009103) RIC3 (ENSGFOG00000009091) ENSGFOG00000009081 TRIM66 (ENSGFOG00000009004) Passeroidea ANCESTRAL SPECIES 1 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584 Zebra finch MODERN SPECIES 27 ABCC8 (ENSTGUG00000008682) KCNJ11 (ENSTGUG00000008677) NUCB2 (ENSTGUG00000008639) PIK3C2A (ENSTGUG00000008575) RPS13 (ENSTGUG00000008572) #8 PLEKHA7 (ENSTGUG00000008557) #10 C11orf58 (ENSTGUG00000024921) #11 SOX6 (ENSTGUG00000008522) #12 INSC (ENSTGUG00000008514) #14 CALCB (ENSTGUG00000008509) #15 CYP2R1 (ENSTGUG00000008492) #17 PDE3B (ENSTGUG00000008479) #19 PSMA1 (ENSTGUG00000008447) #20 ENSTGUG00000028302 COPB1 (ENSTGUG00000008435) #21 RRAS2 (ENSTGUG00000008422) #22 TUB (ENSTGUG00000008407) RIC3 (ENSTGUG00000008401) LMO1 (ENSTGUG00000008389) TRIM66 (ENSTGUG00000008369) RPL27A (ENSTGUG00000008355) DENND2B (ENSTGUG00000008328) C11orf16 (ENSTGUG00000008326) TMEM9B (ENSTGUG00000020995) NRIP3 (ENSTGUG00000008315) SCUBE2 (ENSTGUG00000008276) ENSTGUG00000029587 DENND5A (ENSTGUG00000008239) TMEM41B (ENSTGUG00000024814) IPO7 (ENSTGUG00000008189) ZNF143 (ENSTGUG00000008153) Common canary MODERN SPECIES 3 USH1C (ENSSCAG00000005121) ABCC8 (ENSSCAG00000005141) KCNJ11 (ENSSCAG00000005168) NUCB2 (ENSSCAG00000005171) PIK3C2A (ENSSCAG00000005178) RPS13 (ENSSCAG00000005185) #8 PLEKHA7 (ENSSCAG00000005218) #10 C11orf58 (ENSSCAG00000005235) #11 SOX6 (ENSSCAG00000005255) #12 INSC (ENSSCAG00000005272) #14 CALCB (ENSSCAG00000005276) #15 CYP2R1 (ENSSCAG00000005278) #17 PDE3B (ENSSCAG00000005287) #19 PSMA1 (ENSSCAG00000005319) #20 COPB1 (ENSSCAG00000005322) #21 RRAS2 (ENSSCAG00000005336) #22 TUB (ENSSCAG00000005342) RIC3 (ENSSCAG00000005349) ENSSCAG00000005354 TRIM66 (ENSSCAG00000005363) RPL27A (ENSSCAG00000005368) DENND2B (ENSSCAG00000005375) ENSSCAG00000005380 ENSSCAG00000005387 ASCL3 (ENSSCAG00000005391) TMEM9B (ENSSCAG00000005392) NRIP3 (ENSSCAG00000005395) SCUBE2 (ENSSCAG00000005402) DENND5A (ENSSCAG00000005411) TMEM41B (ENSSCAG00000005431) IPO7 (ENSSCAG00000005435) Great tit MODERN SPECIES 25 MED19 (ENSPMJG00000006481) TMX2 (ENSPMJG00000006428) ENSPMJG00000006427 CTNND1 (ENSPMJG00000006416) LPXN (ENSPMJG00000006408) ZFP91 (ENSPMJG00000006396) CNTF (ENSPMJG00000006394) DTX4 (ENSPMJG00000006392) MPEG1 (ENSPMJG00000006390) INSC (ENSPMJG00000006370) #14 CALCB (ENSPMJG00000006368) #15 CYP2R1 (ENSPMJG00000006364) #17 PDE3B (ENSPMJG00000006349) #19 PSMA1 (ENSPMJG00000006337) #20 COPB1 (ENSPMJG00000006324) #21 RRAS2 (ENSPMJG00000006322) #22 TUB (ENSPMJG00000006294) RIC3 (ENSPMJG00000006290) ENSPMJG00000006285 TRIM66 (ENSPMJG00000006259) RPL27A (ENSPMJG00000006255) DENND2B (ENSPMJG00000006251) C11orf16 (ENSPMJG00000006245) ASCL3 (ENSPMJG00000006244) TMEM9B (ENSPMJG00000006242) NRIP3 (ENSPMJG00000006239) SCUBE2 (ENSPMJG00000006233) DENND5A (ENSPMJG00000006231) TMEM41B (ENSPMJG00000006230) IPO7 (ENSPMJG00000006214) ZNF143 (ENSPMJG00000006206) Neognathae_c ANCESTRAL SPECIES 17 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 Kakapo MODERN SPECIES 21 ABCC8 (ENSSHBG00005000788) KCNJ11 (ENSSHBG00005000811) NUCB2 (ENSSHBG00005000815) ENSSHBG00005012272 ENSSHBG00005012355 RPS13 (ENSSHBG00005012856) #8 PLEKHA7 (ENSSHBG00005012968) #10 C11orf58 (ENSSHBG00005013164) #11 SOX6 (ENSSHBG00005013226) #12 INSC (ENSSHBG00005013739) #14 CALCB (ENSSHBG00005013758) #15 CYP2R1 (ENSSHBG00005013764) #17 PDE3B (ENSSHBG00005013797) #19 PSMA1 (ENSSHBG00005013874) #20 COPB1 (ENSSHBG00005013894) #21 RRAS2 (ENSSHBG00005013925) #22 TUB (ENSSHBG00005013947) RIC3 (ENSSHBG00005013993) ENSSHBG00005014002 ENSSHBG00005014023 TRIM66 (ENSSHBG00005014036) RPL27A (ENSSHBG00005014075) DENND2B (ENSSHBG00005014122) AKIP1 (ENSSHBG00005014232) C11orf16 (ENSSHBG00005014254) ASCL3 (ENSSHBG00005014258) TMEM9B (ENSSHBG00005014265) NRIP3 (ENSSHBG00005014271) SCUBE2 (ENSSHBG00005014279) DENND5A (ENSSHBG00005014427) TMEM41B (ENSSHBG00005016490) Golden eagle MODERN SPECIES 7 ABCC8 (ENSACCG00020012283) KCNJ11 (ENSACCG00020012371) NUCB2 (ENSACCG00020012398) PIK3C2A (ENSACCG00020012476) RPS13 (ENSACCG00020012604) #8 ENSACCG00020012617 PLEKHA7 (ENSACCG00020012653) #10 C11orf58 (ENSACCG00020012713) #11 SOX6 (ENSACCG00020012746) #12 INSC (ENSACCG00020012787) #14 CALCB (ENSACCG00020012823) #15 CYP2R1 (ENSACCG00020012873) #17 PDE3B (ENSACCG00020012978) #19 PSMA1 (ENSACCG00020013012) #20 COPB1 (ENSACCG00020013034) #21 RRAS2 (ENSACCG00020013059) #22 TUB (ENSACCG00020013127) RIC3 (ENSACCG00020013155) ENSACCG00020013233 TRIM66 (ENSACCG00020013270) RPL27A (ENSACCG00020013299) DENND2B (ENSACCG00020013509) ENSACCG00020013646 ASCL3 (ENSACCG00020013660) TMEM9B (ENSACCG00020013672) NRIP3 (ENSACCG00020013702) SCUBE2 (ENSACCG00020013729) DENND5A (ENSACCG00020013831) TMEM41B (ENSACCG00020013897) IPO7 (ENSACCG00020013919) ZNF143 (ENSACCG00020013950) Galloanserae ANCESTRAL SPECIES 4 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 Anatidae ANCESTRAL SPECIES 33 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00960000189985 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666.n ENSGT00940000157584 Pink-footed goose MODERN SPECIES 33 ABCC8 (ENSABRG00000014379) KCNJ11 (ENSABRG00000014070) NUCB2 (ENSABRG00000014061) PIK3C2A (ENSABRG00000014041) RPS13 (ENSABRG00000014031) #8 PLEKHA7 (ENSABRG00000014016) #10 C11orf58 (ENSABRG00000013996) #11 SOX6 (ENSABRG00000013981) #12 ENSABRG00000013975 INSC (ENSABRG00000013914) #14 CALCB (ENSABRG00000013884) #15 CYP2R1 (ENSABRG00000013865) #17 PDE3B (ENSABRG00000013841) #19 PSMA1 (ENSABRG00000013833) #20 COPB1 (ENSABRG00000013817) #21 RRAS2 (ENSABRG00000013813) #22 TUB (ENSABRG00000013769) RIC3 (ENSABRG00000013757) ENSABRG00000013739 TRIM66 (ENSABRG00000013700) Duck MODERN SPECIES 23 MYOD1 (ENSAPLG00000005673) OTOG (ENSAPLG00000008072) USH1C (ENSAPLG00000008735) ABCC8 (ENSAPLG00000009025) KCNJ11 (ENSAPLG00000021853) NUCB2 (ENSAPLG00000010426) PIK3C2A (ENSAPLG00000010801) RPS13 (ENSAPLG00000011983) #8 PLEKHA7 (ENSAPLG00000008901) #10 C11orf58 (ENSAPLG00000018784) #11 SOX6 (ENSAPLG00000008744) #12 INSC (ENSAPLG00000008621) #14 CALCB (ENSAPLG00000008604) #15 PSMA1 (ENSAPLG00000007846) #20 COPB1 (ENSAPLG00000007005) #21 RRAS2 (ENSAPLG00000019435) #22 TUB (ENSAPLG00000013637) RIC3 (ENSAPLG00000014075) ENSAPLG00000022708 ENSAPLG00000029620 TRIM66 (ENSAPLG00000004186) RPL27A (ENSAPLG00000004088) ENSAPLG00000003498 ENSAPLG00000026289 ENSAPLG00000020183 ASCL3 (ENSAPLG00000001043) TMEM9B (ENSAPLG00000003457) NRIP3 (ENSAPLG00000003345) SCUBE2 (ENSAPLG00000002698) DENND5A (ENSAPLG00000002386) TMEM41B (ENSAPLG00000002287) Phasianidae ANCESTRAL SPECIES 4 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00950000183002.A ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584 ENSGT00940000157939 Chicken MODERN SPECIES 34 ENSGALG00010023291 ABCC8 (ENSGALG00010023276) KCNJ11 (ENSGALG00010023268) NUCB2 (ENSGALG00010023238) PIK3C2A (ENSGALG00010023209) RPS13 (ENSGALG00010023199) #8 PLEKHA7 (ENSGALG00010023181) #10 C11orf58 (ENSGALG00010023144) #11 SOX6 (ENSGALG00010023131) #12 INSC (ENSGALG00010022949) #14 CALCA (ENSGALG00010023759) #15 CYP2R1 (ENSGALG00010023724) #17 PDE3B (ENSGALG00010023636) #19 PSMA1 (ENSGALG00010023624) #20 COPB1 (ENSGALG00010023613) #21 RRAS (ENSGALG00010020716) #22 TUB (ENSGALG00010020692) RIC3 (ENSGALG00010020655) LMO1 (ENSGALG00010020651) TRIM66 (ENSGALG00010020629) RPL27A (ENSGALG00010020612) DENND2B (ENSGALG00010020602) ENSGALG00010020601 C11orf16 (ENSGALG00010020586) NRIP3 (ENSGALG00010022655) SCUBE2 (ENSGALG00010019483) DENND5A (ENSGALG00010019373) TMEM41B (ENSGALG00010022575) IPO7 (ENSGALG00010021175) ZNF143 (ENSGALG00010021160) WEE1 (ENSGALG00010021136) Turkey MODERN SPECIES 25 ENSMGAG00000006133 ENSMGAG00000020105 ENSMGAG00000006185 ENSMGAG00000006206 ENSMGAG00000019341 ENSMGAG00000006300 ENSMGAG00000006324 NRIP3 (ENSMGAG00000006373) ASCL3 (ENSMGAG00000021393) ENSMGAG00000006393 ENSMGAG00000006379 ENSMGAG00000006398 ENSMGAG00000006473 ENSMGAG00000006522 ENSMGAG00000006534 ENSMGAG00000006557 #22 ENSMGAG00000006566 #21 PSMA1 (ENSMGAG00000006666) #20 ENSMGAG00000020746 #17 ENSMGAG00000006695 #19 ENSMGAG00000006737 #17 CALCB (ENSMGAG00000006766) #15 ENSMGAG00000017350 #14 ENSMGAG00000018205 ENSMGAG00000002415 ENSMGAG00000002390 ENSMGAG00000002680 ENSMGAG00000022141 ENSMGAG00000002643 ENSMGAG00000002457 ENSMGAG00000002427 Japanese quail MODERN SPECIES 23 USH1C (ENSCJPG00005010751) ABCC8 (ENSCJPG00005006650) KCNJ11 (ENSCJPG00005006618) NUCB2 (ENSCJPG00005006615) PIK3C2A (ENSCJPG00005006394) RPS13 (ENSCJPG00005006391) #8 PLEKHA7 (ENSCJPG00005005307) #10 C11orf58 (ENSCJPG00005005288) #11 SOX6 (ENSCJPG00005004765) #12 INSC (ENSCJPG00005004754) #14 CALCB (ENSCJPG00005004753) #15 CYP2R1 (ENSCJPG00005004751) #17 PDE3B (ENSCJPG00005004739) #19 PSMA1 (ENSCJPG00005004737) #20 COPB1 (ENSCJPG00005004731) #21 RRAS2 (ENSCJPG00005004729) #22 TUB (ENSCJPG00005004714) RIC3 (ENSCJPG00005004706) ENSCJPG00005004702 TRIM66 (ENSCJPG00005004687) RPL27A (ENSCJPG00005004683) DENND2B (ENSCJPG00005004671) AKIP1 (ENSCJPG00005004648) C11orf16 (ENSCJPG00005004647) ASCL3 (ENSCJPG00005004646) TMEM9B (ENSCJPG00005004645) NRIP3 (ENSCJPG00005004639) SCUBE2 (ENSCJPG00005004638) DENND5A (ENSCJPG00005003964) TMEM41B (ENSCJPG00005003955) IPO7 (ENSCJPG00005003942) African ostrich MODERN SPECIES 960 ENSSCUG00000018016 RPS13 (ENSSCUG00000018015) #8 ENSSCUG00000018014 #8 PLEKHA7 (ENSSCUG00000018005) #10 C11orf58 (ENSSCUG00000018001) #11 SOX6 (ENSSCUG00000017990) #12 INSC (ENSSCUG00000017985) #14 CALCB (ENSSCUG00000017983) #15 CYP2R1 (ENSSCUG00000017981) #17 PDE3B (ENSSCUG00000017977) #19 PSMA1 (ENSSCUG00000017974) #20 COPB1 (ENSSCUG00000017972) #21 RRAS2 (ENSSCUG00000017968) #22 TUB (ENSSCUG00000017962) RIC3 (ENSSCUG00000017957) ENSSCUG00000017955 STK33 (ENSSCUG00000017943) TRIM66 (ENSSCUG00000017940) RPL27A (ENSSCUG00000017935) ENSSCUG00000017930 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 33 TMA16 (ENSCPRG00005010535) NPY5R (ENSCPRG00005010528) NPY1R (ENSCPRG00005010527) NAF1 (ENSCPRG00005010525) ENSCPRG00005010506 FSTL5 (ENSCPRG00005010471) RAPGEF2 (ENSCPRG00005010412) FNIP2 (ENSCPRG00005010374) PPID (ENSCPRG00005010369) ENSCPRG00005010367 ETFDH (ENSCPRG00005010363) C4orf46 (ENSCPRG00005010359) RXFP1 (ENSCPRG00005010339) TMEM144 (ENSCPRG00005010313) GASK1B (ENSCPRG00005010309) RRAS2 (ENSCPRG00005010300) #22 GRIA2 (ENSCPRG00005009459) GLRB (ENSCPRG00005009364) ENSCPRG00005009355 PDGFC (ENSCPRG00005009350) CTSO (ENSCPRG00005009326) TDO2 (ENSCPRG00005009318) ASIC5 (ENSCPRG00005009316) GUCY1B1 (ENSCPRG00005009294) GUCY1A1 (ENSCPRG00005009286) NPY2R (ENSCPRG00005009276) RBM46 (ENSCPRG00005009271) LRAT (ENSCPRG00005009270) ENSCPRG00005009265 FGG (ENSCPRG00005009246) ENSCPRG00005009243 Australian saltwater crocodile MODERN SPECIES 64 ABCC8 (ENSCPRG00005000714) KCNJ11 (ENSCPRG00005000802) ENSCPRG00005000808 NUCB2 (ENSCPRG00005000844) PIK3C2A (ENSCPRG00005000874) RPS13 (ENSCPRG00005000894) #8 PLEKHA7 (ENSCPRG00005000979) #10 C11orf58 (ENSCPRG00005001016) #11 SOX6 (ENSCPRG00005001080) #12 INSC (ENSCPRG00005001166) #14 ENSCPRG00005001195 #15 CYP2R1 (ENSCPRG00005001210) #17 PDE3B (ENSCPRG00005001263) #19 PSMA1 (ENSCPRG00005001325) #20 COPB1 (ENSCPRG00005001336) #21 ENSCPRG00005001398 #22 TUB (ENSCPRG00005001429) ENSCPRG00005001454 ENSCPRG00005001483 STK33 (ENSCPRG00005001516) TRIM66 (ENSCPRG00005001523) ENSCPRG00005001562 ENSCPRG00005001583 DENND2B (ENSCPRG00005001590) AKIP1 (ENSCPRG00005001663) C11orf16 (ENSCPRG00005001666) ASCL3 (ENSCPRG00005001668) TMEM9B (ENSCPRG00005001671) NRIP3 (ENSCPRG00005001675) ENSCPRG00005001681 SCUBE2 (ENSCPRG00005001716) Lepidosauria ANCESTRAL SPECIES 10 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00940000175801.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b tuatara MODERN SPECIES 1176 INSC (ENSSPUG00000016891) #14 CALCB (ENSSPUG00000016877) #15 CYP2R1 (ENSSPUG00000016856) #17 PDE3B (ENSSPUG00000016838) #19 PSMA1 (ENSSPUG00000016826) #20 COPB1 (ENSSPUG00000016789) #21 RRAS2 (ENSSPUG00000016774) #22 ENSSPUG00000016726 RIC3 (ENSSPUG00000016709) ENSSPUG00000016705 Episquamata ANCESTRAL SPECIES ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00940000175801.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.c.a ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Laterata ANCESTRAL SPECIES 2 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.c.a.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Common wall lizard MODERN SPECIES NUCB2 (ENSPMRG00000002326) PIK3C2A (ENSPMRG00000001137) RPS13 (ENSPMRG00000000463) #8 PLEKHA7 (ENSPMRG00000000278) #10 C11orf58 (ENSPMRG00000000197) #11 SOX6 (ENSPMRG00000000151) #12 INSC (ENSPMRG00000000119) #14 ENSPMRG00000000108 CALCB (ENSPMRG00000000101) #15 CYP2R1 (ENSPMRG00000000090) #17 ENSPMRG00000005100 PDE3B (ENSPMRG00000005069) #19 ENSPMRG00000005064 ENSPMRG00000005054 #20 COPB1 (ENSPMRG00000005032) #21 RRAS2 (ENSPMRG00000005020) #22 TUB (ENSPMRG00000005011) RIC3 (ENSPMRG00000005008) ENSPMRG00000005005 STK33 (ENSPMRG00000004991) ENSPMRG00000004987 TRIM66 (ENSPMRG00000004961) ENSPMRG00000004941 DENND2B (ENSPMRG00000004934) AKIP1 (ENSPMRG00000004930) ENSPMRG00000004924 ENSPMRG00000004921 ASCL3 (ENSPMRG00000004917) TMEM9B (ENSPMRG00000004914) ENSPMRG00000004911 NRIP3 (ENSPMRG00000004904) Argentine black and white tegu MODERN SPECIES 3 ENSSMRG00000014929 NUCB2 (ENSSMRG00000014933) PIK3C2A (ENSSMRG00000014936) RPS13 (ENSSMRG00000014938) #8 PLEKHA7 (ENSSMRG00000014940) #10 C11orf58 (ENSSMRG00000014949) #11 ENSSMRG00000014950 SOX6 (ENSSMRG00000014958) #12 ENSSMRG00000014961 INSC (ENSSMRG00000014967) #14 CALCB (ENSSMRG00000014973) #15 CYP2R1 (ENSSMRG00000014975) #17 PDE3B (ENSSMRG00000014980) #19 PSMA1 (ENSSMRG00000014981) #20 COPB1 (ENSSMRG00000014984) #21 RRAS2 (ENSSMRG00000014988) #22 TUB (ENSSMRG00000014990) RIC3 (ENSSMRG00000014996) ENSSMRG00000014997 STK33 (ENSSMRG00000015004) TRIM66 (ENSSMRG00000015010) ENSSMRG00000015013 DENND2B (ENSSMRG00000015015) AKIP1 (ENSSMRG00000015019) C11orf16 (ENSSMRG00000015022) ASCL3 (ENSSMRG00000015024) TMEM9B (ENSSMRG00000015025) NRIP3 (ENSSMRG00000015028) ENSSMRG00000015030 SCUBE2 (ENSSMRG00000015034) DENND5A (ENSSMRG00000015036) Toxicofera ANCESTRAL SPECIES 5 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813 ENSGT00940000175801.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.d ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b Lizard MODERN SPECIES 908 ENSACAG00000002358 ENSACAG00000002354 ENSACAG00000043748 PSMA1 (ENSACAG00000012581) #20 ENSACAG00000012414 #21 RRAS2 (ENSACAG00000012369) #22 ENSACAG00000043746 TUB (ENSACAG00000012730) ENSACAG00000012682 ENSACAG00000012661 STK33 (ENSACAG00000012603) Elapidae ANCESTRAL SPECIES 3 ENSGT00940000156626 ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813.e ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.d ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b.f ENSGT00940000153678.a.b Indian cobra MODERN SPECIES KCNJ11 (ENSNNAG00000016074) ENSNNAG00000016077 NUCB2 (ENSNNAG00000016084) PIK3C2A (ENSNNAG00000016104) RPS13 (ENSNNAG00000016191) #8 PLEKHA7 (ENSNNAG00000016200) #10 C11orf58 (ENSNNAG00000016255) #11 SOX6 (ENSNNAG00000016276) #12 ENSNNAG00000016327 INSC (ENSNNAG00000016333) #14 CALCB (ENSNNAG00000016369) #15 CYP2R1 (ENSNNAG00000000329) #17 PDE3B (ENSNNAG00000000351) #19 PSMA1 (ENSNNAG00000000376) #20 COPB1 (ENSNNAG00000000393) #21 RRAS2 (ENSNNAG00000000416) #22 TUB (ENSNNAG00000000452) RIC3 (ENSNNAG00000000514) ENSNNAG00000000532 STK33 (ENSNNAG00000000554) TRIM66 (ENSNNAG00000000576) RPL27A (ENSNNAG00000000608) DENND2B (ENSNNAG00000000646) ENSNNAG00000000699 ASCL3 (ENSNNAG00000000710) TMEM9B (ENSNNAG00000000716) NRIP3 (ENSNNAG00000000729) ENSNNAG00000000747 SCUBE2 (ENSNNAG00000000809) DENND5A (ENSNNAG00000000912) TMEM41B (ENSNNAG00000001126) Elapidae_a ANCESTRAL SPECIES 29 ENSGT00940000156626.f ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813.e ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.d ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b.f ENSGT00940000153678.a.b Acanthophiinae ANCESTRAL SPECIES 29 ENSGT00940000156626.f ENSGT00990000203615.a.a.a.b ENSGT00940000163348.e ENSGT00390000001927.a ENSGT00940000157813.e ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00390000005534.b.d ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00390000014476.b ENSGT00940000153185.a.b.f ENSGT00940000153678.a.b Eastern brown snake MODERN SPECIES 32 ENSPTXG00000000661 KCNJ11 (ENSPTXG00000000659) ENSPTXG00000000655 NUCB2 (ENSPTXG00000000649) PIK3C2A (ENSPTXG00000000640) RPS13 (ENSPTXG00000000631) #8 PLEKHA7 (ENSPTXG00000000617) #10 C11orf58 (ENSPTXG00000000613) #11 SOX6 (ENSPTXG00000000601) #12 INSC (ENSPTXG00000000590) #14 CALCB (ENSPTXG00000000580) #15 CYP2R1 (ENSPTXG00000000493) #17 PDE3B (ENSPTXG00000000476) #19 PSMA1 (ENSPTXG00000000454) #20 COPB1 (ENSPTXG00000000411) #21 RRAS2 (ENSPTXG00000000391) #22 TUB (ENSPTXG00000000377) RIC3 (ENSPTXG00000000328) ENSPTXG00000000302 STK33 (ENSPTXG00000000266) ENSPTXG00000000250 TRIM66 (ENSPTXG00000000217) RPL27A (ENSPTXG00000000118) DENND2B (ENSPTXG00000017527) ENSPTXG00000017526 ENSPTXG00000017525 ASCL3 (ENSPTXG00000017524) TMEM9B (ENSPTXG00000017523) ENSPTXG00000017521 NRIP3 (ENSPTXG00000017520) SCUBE2 (ENSPTXG00000017518) Mainland tiger snake MODERN SPECIES 22 ABCC8 (ENSNSUG00000018128) KCNJ11 (ENSNSUG00000018189) ENSNSUG00000018191 NUCB2 (ENSNSUG00000018192) ENSNSUG00000018193 ENSNSUG00000018194 RPS13 (ENSNSUG00000018197) #8 PLEKHA7 (ENSNSUG00000018214) #10 C11orf58 (ENSNSUG00000018419) #11 SOX6 (ENSNSUG00000018420) #12 INSC (ENSNSUG00000018421) #14 CYP2R1 (ENSNSUG00000018424) #17 PDE3B (ENSNSUG00000018425) #19 PSMA1 (ENSNSUG00000018427) #20 COPB1 (ENSNSUG00000018428) #21 RRAS2 (ENSNSUG00000018430) #22 ENSNSUG00000018431 TUB (ENSNSUG00000018432) ENSNSUG00000018433 ENSNSUG00000018434 ENSNSUG00000018436 STK33 (ENSNSUG00000018437) ENSNSUG00000018438 RPL27A (ENSNSUG00000018440) DENND2B (ENSNSUG00000018442) ENSNSUG00000018447 ASCL3 (ENSNSUG00000018448) TMEM9B (ENSNSUG00000018449) NRIP3 (ENSNSUG00000018450) ENSNSUG00000018451 SCUBE2 (ENSNSUG00000018452) Blue-lipped sea krait MODERN SPECIES 7008 RRAS2 (ENSLLTG00000014669) #22 Anura ANCESTRAL SPECIES 137 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT00940000156433.B #12 ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000165144.b ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00940000162850 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00940000153678.a.b ENSGT00940000156956 Frog MODERN SPECIES 4 ENSXETG00000041067 ENSXETG00000046747 ENSXETG00000047734 ENSXETG00000036232 pik3c2a (ENSXETG00000016008) nucb2 (ENSXETG00000043718) c11orf58 (ENSXETG00000043933) #11 ENSXETG00000043389 sox6 (ENSXETG00000016058) #12 pde3b (ENSXETG00000019677) #19 insc (ENSXETG00000046000) #14 calca (ENSXETG00000043547) #15 cyp2r1 (ENSXETG00000043231) #17 psma1 (ENSXETG00000046840) #20 copb1 (ENSXETG00000019682) #21 rras2 (ENSXETG00000048702) #22 tub (ENSXETG00000041967) ENSXETG00000039124 ric3 (ENSXETG00000044363) lmo1 (ENSXETG00000042817) ENSXETG00000036519 ENSXETG00000034844 stk33 (ENSXETG00000040246) fpgt (ENSXETG00000045459) dennd2b (ENSXETG00000033444) ENSXETG00000048180 ENSXETG00000043763 ENSXETG00000043918 ENSXETG00000044432 ENSXETG00000045099 ASCL3 (ENSXETG00000044904) Leishan spiny toad MODERN SPECIES 1 TMEM41B (ENSLLEG00000026667) DENND5A (ENSLLEG00000026749) SCUBE2 (ENSLLEG00000026981) ENSLLEG00000027443 NRIP3 (ENSLLEG00000027454) TMEM9B (ENSLLEG00000027508) ENSLLEG00000027540 DENND2B (ENSLLEG00000027581) ENSLLEG00000027879 STK33 (ENSLLEG00000027946) ENSLLEG00000028029 CYP2R1 (ENSLLEG00000028067) #17 PDE3B (ENSLLEG00000021083) #19 COPB1 (ENSLLEG00000021502) #21 ENSLLEG00000021841 RRAS2 (ENSLLEG00000021864) #22 ENSLLEG00000021910 ENSLLEG00000021941 TUB (ENSLLEG00000021996) ENSLLEG00000022329 ENSLLEG00000022418 ENSLLEG00000022438 ENSLLEG00000022510 ENSLLEG00000022548 ENSLLEG00000022938 #15 ENSLLEG00000023024 INSC (ENSLLEG00000023043) #14 ENSLLEG00000023162 ENSLLEG00000023171 SOX6 (ENSLLEG00000023236) #12 ENSLLEG00000023961 Coelacanth MODERN SPECIES 270 INSC (ENSLACG00000005479) #14 CALCB (ENSLACG00000009517) #15 CYP2R1 (ENSLACG00000009943) #17 PDE3B (ENSLACG00000010213) #19 PSMA1 (ENSLACG00000012559) #20 COPB1 (ENSLACG00000012698) #21 RRAS2 (ENSLACG00000013122) #22 ENSLACG00000013499 ENSLACG00000014501 lmo1 (ENSLACG00000015190) ENSLACG00000022126 TRIM66 (ENSLACG00000016493) RPL27A (ENSLACG00000016622) DENND2B (ENSLACG00000016648) AKIP1 (ENSLACG00000022522) C11orf16 (ENSLACG00000017064) ASCL3 (ENSLACG00000017099) TMEM9B (ENSLACG00000017114) SCUBE2 (ENSLACG00000017274) sinhcafl (ENSLACG00000017409) ##13 DENND5A (ENSLACG00000017452) TMEM41B (ENSLACG00000017562) Actinopterygii ANCESTRAL SPECIES 36 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000154404.a ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00950000182939.b.b ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685 ENSGT00940000159240 ENSGT00390000005534 ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 Reedfish MODERN SPECIES 10 si:dkey-10o6.2 (ENSECRG00000003829) nucb2b (ENSECRG00000003824) PIK3C2A (ENSECRG00000003812) rps13 (ENSECRG00000003804) #8 PLEKHA7 (ENSECRG00000003752) #10 C11orf58 (ENSECRG00000003724) #11 SOX6 (ENSECRG00000003717) #12 ENSECRG00000003710 INSC (ENSECRG00000003699) #14 ENSECRG00000003694 #15 calca (ENSECRG00000003688) #15 CYP2R1 (ENSECRG00000003679) #17 PDE3B (ENSECRG00000003651) #19 psma1 (ENSECRG00000003640) #20 copb1 (ENSECRG00000003626) #21 rras2 (ENSECRG00000003612) #22 chka (ENSECRG00000003601) kmt5b (ENSECRG00000003582) ENSECRG00000003568 lrp5 (ENSECRG00000003521) tp53i11b (ENSECRG00000003497) tspan18b (ENSECRG00000003485) cd82b (ENSECRG00000003471) ext2 (ENSECRG00000003453) alx4b (ENSECRG00000003441) ENSECRG00000003429 ENSECRG00000003422 ENSECRG00000003411 ENSECRG00000003401 ENSECRG00000003393 ENSECRG00000003387 Neopterygii ANCESTRAL SPECIES 4 ENSGT00390000001927.a ENSGT00940000157813 ENSGT00390000017491 #8 ENSGT00940000154404.a ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00950000182939.b.b ENSGT00390000001511 #14 ENSGT00940000156267 #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a ENSGT00940000153908.b.a.a ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685 ENSGT00940000159240 ENSGT00390000005534.c.a ENSGT00390000005534.d ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b Spotted gar MODERN SPECIES 666 nat10 (ENSLOCG00000002896) nucb2b (ENSLOCG00000002925) PIK3C2A (ENSLOCG00000002963) rps13 (ENSLOCG00000002984) #8 ppp1r15b (ENSLOCG00000002993) PLEKHA7 (ENSLOCG00000003006) #10 zgc:56106 (ENSLOCG00000003054) #11 SOX6 (ENSLOCG00000003065) #12 ENSLOCG00000003091 INSC (ENSLOCG00000003105) #14 calca (ENSLOCG00000003120) #15 CYP2R1 (ENSLOCG00000003133) #17 PDE3B (ENSLOCG00000003151) #19 psma1 (ENSLOCG00000003163) #20 copb1 (ENSLOCG00000003198) #21 rras2 (ENSLOCG00000003220) #22 TUB (ENSLOCG00000003233) RIC3 (ENSLOCG00000003266) lmo1 (ENSLOCG00000003286) stk33 (ENSLOCG00000003301) rerglb (ENSLOCG00000003313) TRIM66 (ENSLOCG00000003340) RPL27A (ENSLOCG00000003356) dennd2b (ENSLOCG00000003366) AKIP1 (ENSLOCG00000003390) C11orf16 (ENSLOCG00000003423) tmem9b (ENSLOCG00000003446) NRIP3 (ENSLOCG00000003477) ENSLOCG00000003497 scube2 (ENSLOCG00000003510) sinhcafl (ENSLOCG00000003540) ##13 Osteoglossocephalai ANCESTRAL SPECIES 29 ENSGT00940000154404.a ENSGT00940000155817.a.a #10 ENSGT00390000000687 #11 ENSGT01030000235062 ENSGT00940000156433.B #12 ENSGT00950000182939.b.b ENSGT00390000001511 #14 ENSGT00940000156267.ob.a.b #15 ENSGT00940000156267.ob.b.a #15 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855 #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.a ENSGT00440000034107.a.f ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685 ENSGT00940000159240 ENSGT00390000005534.d ENSGT00950000182931.B.b ENSGT00390000017064 ENSGT00390000012348 ENSGT00390000000819.a ENSGT00950000182999.b.a.b ENSGT00940000153185.a.b Osteoglossiformes ANCESTRAL SPECIES 107 ENSGT00940000156574.C.m ENSGT00940000156431.d ENSGT00390000017249.e ENSGT00940000158481.c ENSGT00940000157667.c ENSGT00940000156620 ENSGT00940000159662.a ENSGT00940000153438.a.u ENSGT00390000001927.a.a.b ENSGT00940000155817.a.a.b #10 ENSGT00940000156433.A.b ##12 ENSGT00950000182939.b.b ENSGT00940000159336.j #19 ENSGT00550000074855.gc #20 ENSGT00390000005270.d #21 ENSGT00940000155328 #22 ENSGT00940000158372.b ENSGT00440000034107.a.f ENSGT00940000153908.b.a.b ENSGT00940000167685.d ENSGT00940000165144.b ENSGT00940000159240.d ENSGT00390000005534.c.a ENSGT00950000182931.B.b.r ENSGT00390000012348 ENSGT00390000000819.a.y ENSGT00950000182999.b.a.b ENSGT00390000006485.d.b ##13 ENSGT00940000153678.a.b.b ENSGT00940000156956.s ENSGT00940000154666 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 11 si:dkey-10o6.2 (ENSSFOG00015015345) nucb2b (ENSSFOG00015015319) PIK3C2A (ENSSFOG00015015207) rps13 (ENSSFOG00015015170) #8 ppp1r15b (ENSSFOG00015015152) PLEKHA7 (ENSSFOG00015014920) #10 zgc:56106 (ENSSFOG00015027929) #11 sox6 (ENSSFOG00015014803) ##12 INSC (ENSSFOG00015014732) #14 ENSSFOG00015027885 CALCB (ENSSFOG00015014710) #15 CYP2R1 (ENSSFOG00015014699) #17 PDE3B (ENSSFOG00015014668) #19 psma1 (ENSSFOG00015014611) #20 copb1 (ENSSFOG00015014478) #21 rras2 (ENSSFOG00015029650) #22 TUB (ENSSFOG00015014362) RIC3 (ENSSFOG00015033214) lmo1 (ENSSFOG00015014329) rerglb (ENSSFOG00015014306) TRIM66 (ENSSFOG00015014289) RPL27A (ENSSFOG00015027419) dennd2b (ENSSFOG00015014216) ENSSFOG00015014193 tmem9b (ENSSFOG00015014179) NRIP3 (ENSSFOG00015014168) sinhcafl (ENSSFOG00015030437) ##13 DENND5A (ENSSFOG00015014112) tmem41b (ENSSFOG00015014085) ipo7 (ENSSFOG00015013937) znf143b (ENSSFOG00015013890) Asian bonytongue MODERN SPECIES 2 TP53I11 (ENSSFOG00015032032) CD82 (ENSSFOG00015012215) tspan18b (ENSSFOG00015012258) ext2 (ENSSFOG00015012303) ALX4 (ENSSFOG00015027263) caprin1a (ENSSFOG00015012323) RPS13 (ENSSFOG00015012346) #8 PLEKHA7 (ENSSFOG00015012391) #10 sox6 (ENSSFOG00015012462) ##12 ENSSFOG00015012498 calca (ENSSFOG00015012523) #15 CYP2R1 (ENSSFOG00015012536) #17 PDE3B (ENSSFOG00015028493) #19 psma1 (ENSSFOG00015012567) #20 copb1 (ENSSFOG00015012600) #21 rras2 (ENSSFOG00015030641) #22 TUB (ENSSFOG00015012717) RIC3 (ENSSFOG00015025276) lmo1 (ENSSFOG00015032896) stk33 (ENSSFOG00015012819) rerglb (ENSSFOG00015012843) TRIM66 (ENSSFOG00015012870) RPL27A (ENSSFOG00015014270) dennd2b (ENSSFOG00015012913) AKIP1 (ENSSFOG00015012998) tmem9b (ENSSFOG00015013010) swap70b (ENSSFOG00015013026) WEE1 (ENSSFOG00015013083) ZNF143 (ENSSFOG00015013103) DENND5A (ENSSFOG00015013152) ENSSFOG00015026926 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 12 TP53I11 (ENSPKIG00000014988) cd82b (ENSPKIG00000015005) TSPAN18 (ENSPKIG00000015030) ext2 (ENSPKIG00000015088) ALX4 (ENSPKIG00000015140) caprin1a (ENSPKIG00000015169) NUCB2 (ENSPKIG00000015290) rps13 (ENSPKIG00000015485) #8 PLEKHA7 (ENSPKIG00000015586) #10 sox6 (ENSPKIG00000015867) ##12 ENSPKIG00000015999 calca (ENSPKIG00000016029) #15 ENSPKIG00000016040 PDE3B (ENSPKIG00000016054) #19 copb1 (ENSPKIG00000016086) #21 rras2 (ENSPKIG00000016148) #22 TUB (ENSPKIG00000016182) RIC3 (ENSPKIG00000016227) LMO1 (ENSPKIG00000016258) stk33 (ENSPKIG00000016292) rerglb (ENSPKIG00000016317) TRIM66 (ENSPKIG00000016352) ENSPKIG00000016401 dennd2b (ENSPKIG00000016433) tmem9b (ENSPKIG00000016469) ENSPKIG00000016481 swap70b (ENSPKIG00000016501) WEE1 (ENSPKIG00000016550) znf143a (ENSPKIG00000016605) TMEM41B (ENSPKIG00000016631) DENND5A (ENSPKIG00000016682) P. kingsleyae MODERN SPECIES 121 ENSPKIG00000024126 si:dkey-10o6.2 (ENSPKIG00000024109) nucb2b (ENSPKIG00000024097) PIK3C2A (ENSPKIG00000024007) rps13 (ENSPKIG00000023950) #8 PLEKHA7 (ENSPKIG00000023791) #10 zgc:56106 (ENSPKIG00000023721) #11 sox6 (ENSPKIG00000023705) ##12 INSC (ENSPKIG00000023663) #14 calca (ENSPKIG00000023649) #15 CYP2R1 (ENSPKIG00000023638) #17 PDE3B (ENSPKIG00000023608) #19 psma1 (ENSPKIG00000023584) #20 copb1 (ENSPKIG00000023542) #21 ENSPKIG00000023524 rras2 (ENSPKIG00000023509) #22 TUB (ENSPKIG00000023477) ENSPKIG00000023448 lmo1 (ENSPKIG00000023434) Clupeocephala ANCESTRAL SPECIES 228 ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000167685.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584.a.b Otomorpha ANCESTRAL SPECIES 265 ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b ENSGT00940000160143 Clupeiformes ANCESTRAL SPECIES 38 ENSGT00940000157505 ENSGT00940000153499.b.b.d.a.a ENSGT00940000158146.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT01030000235035 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00390000005939.b ENSGT00940000159421 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000165144.b ENSGT00940000159240 ENSGT00390000005534.d.e ENSGT00950000182931.B.b.cb ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b Atlantic herring MODERN SPECIES 22 map2k5 (ENSCHAG00000024351) SMAD3 (ENSCHAG00000024368) smad6a (ENSCHAG00000024456) crybgx (ENSCHAG00000024459) lctla (ENSCHAG00000024470) tipin (ENSCHAG00000024505) dis3l (ENSCHAG00000024525) ENSCHAG00000024549 fibinb (ENSCHAG00000024552) bbox1 (ENSCHAG00000024557) MADD (ENSCHAG00000024588) nr1h3 (ENSCHAG00000024937) ATXN1L (ENSCHAG00000024986) ZNF821 (ENSCHAG00000024989) copb1 (ENSCHAG00000024999) #21 rras2 (ENSCHAG00000025016) #22 TUB (ENSCHAG00000025022) ENSCHAG00000025031 lmo1 (ENSCHAG00000025047) stk33 (ENSCHAG00000025067) rerglb (ENSCHAG00000025075) ENSCHAG00000025086 RPL27A (ENSCHAG00000025100) dennd2b (ENSCHAG00000025158) tmem9b (ENSCHAG00000025845) scube2 (ENSCHAG00000025898) slc7a6os (ENSCHAG00000026322) slc7a6 (ENSCHAG00000026332) ENSCHAG00000026396 adgrg1 (ENSCHAG00000026407) ccdc102a (ENSCHAG00000026421) Denticle herring MODERN SPECIES 7 map2k5 (ENSDCDG00000022906) SMAD3 (ENSDCDG00000022693) smad6a (ENSDCDG00000022684) crybgx (ENSDCDG00000022683) lctla (ENSDCDG00000022677) tipin (ENSDCDG00000022673) dis3l (ENSDCDG00000035696) ENSDCDG00000035691 fibinb (ENSDCDG00000035687) bbox1 (ENSDCDG00000035684) MADD (ENSDCDG00000035262) nr1h3 (ENSDCDG00000035058) ATXN1L (ENSDCDG00000035052) ZNF821 (ENSDCDG00000035051) copb1 (ENSDCDG00000035049) #21 rras2 (ENSDCDG00000035046) #22 TUB (ENSDCDG00000035039) ENSDCDG00000035035 lmo1 (ENSDCDG00000035034) stk33 (ENSDCDG00000035024) rerglb (ENSDCDG00000035015) ENSDCDG00000035010 RPL27A (ENSDCDG00000035006) dennd2b (ENSDCDG00000034766) tmem9b (ENSDCDG00000034754) scube2 (ENSDCDG00000034695) slc7a6os (ENSDCDG00000034667) slc7a6 (ENSDCDG00000034638) ENSDCDG00000034620 adgrg1 (ENSDCDG00000034619) ccdc102a (ENSDCDG00000034617) Otophysi ANCESTRAL SPECIES 110 ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b ENSGT00940000160143 ENSGT00940000164014.a.b.m Characiphysae ANCESTRAL SPECIES 97 ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491.d #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b ENSGT00940000160143 ENSGT00940000164014.a.b.m Channel catfish MODERN SPECIES 1 sox6 (ENSIPUG00000003459) ##12 plekha7 (ENSIPUG00000003510) #10 ENSIPUG00000003585 CALCA (ENSIPUG00000003601) #15 CYP2R1 (ENSIPUG00000003618) #17 pde3b (ENSIPUG00000003658) #19 copb1 (ENSIPUG00000003744) #21 rras2 (ENSIPUG00000003813) #22 tub (ENSIPUG00000003834) ENSIPUG00000003867 lmo1 (ENSIPUG00000003886) ENSIPUG00000003937 ENSIPUG00000003944 ENSIPUG00000003945 stk33 (ENSIPUG00000003954) rerglb (ENSIPUG00000003974) trim66 (ENSIPUG00000003979) st5 (ENSIPUG00000004000) Tmem9b (ENSIPUG00000004059) scube2 (ENSIPUG00000004118) cog4 (ENSIPUG00000004222) ENSIPUG00000004324 ENSIPUG00000004337 Characiphysae_b ANCESTRAL SPECIES 70 ENSGT00390000005939.b ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491.d #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b ENSGT00940000160143 ENSGT00940000164014.a.b.m Characoidei ANCESTRAL SPECIES 110 ENSGT00390000005939.b ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491.d #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT00940000166567 ENSGT00940000154285.b.a.b ENSGT00940000154285.b.a.a.b ENSGT00730000110960.b Red-bellied piranha MODERN SPECIES 69 tp53i11a (ENSPNAG00000015209) cd82a (ENSPNAG00000015230) tspan18a (ENSPNAG00000015265) ext2 (ENSPNAG00000015345) ENSPNAG00000005329 caprin1a (ENSPNAG00000015410) nucb2a (ENSPNAG00000015458) rps13 (ENSPNAG00000015511) #8 ENSPNAG00000003392 PLEKHA7 (ENSPNAG00000015666) #10 sox6 (ENSPNAG00000015764) ##12 ENSPNAG00000015793 #15 CYP2R1 (ENSPNAG00000015826) #17 PDE3B (ENSPNAG00000015911) #19 copb1 (ENSPNAG00000015989) #21 rras2 (ENSPNAG00000016021) #22 TUB (ENSPNAG00000016113) ENSPNAG00000016143 lmo1 (ENSPNAG00000016162) stk33 (ENSPNAG00000016194) rerglb (ENSPNAG00000016246) TRIM66 (ENSPNAG00000016260) dennd2b (ENSPNAG00000016365) tmem9b (ENSPNAG00000016385) scube2 (ENSPNAG00000017003) Mexicana tetra MODERN SPECIES 20 ENSAMXG00000032185 cd82a (ENSAMXG00000004666) tspan18a (ENSAMXG00000037063) ext2 (ENSAMXG00000004653) ALX4 (ENSAMXG00000004649) caprin1a (ENSAMXG00000006601) nucb2a (ENSAMXG00000006579) rps13 (ENSAMXG00000035883) #8 PLEKHA7 (ENSAMXG00000006514) #10 sox6 (ENSAMXG00000006474) ##12 calca (ENSAMXG00000040690) #15 CYP2R1 (ENSAMXG00000034177) #17 PDE3B (ENSAMXG00000007860) #19 ENSAMXG00000039604 copb1 (ENSAMXG00000014063) #21 rras2 (ENSAMXG00000034061) #22 TUB (ENSAMXG00000010003) ENSAMXG00000035493 lmo1 (ENSAMXG00000010024) stk33 (ENSAMXG00000015364) rerglb (ENSAMXG00000036537) TRIM66 (ENSAMXG00000040117) dennd2b (ENSAMXG00000036346) tmem9b (ENSAMXG00000008120) Electric eel MODERN SPECIES 109 tp53i11a (ENSEEEG00000019857) ENSEEEG00000019856 cd82a (ENSEEEG00000019855) tspan18a (ENSEEEG00000019854) ext2 (ENSEEEG00000019846) ENSEEEG00000019843 caprin1a (ENSEEEG00000019841) nucb2a (ENSEEEG00000019726) rps13 (ENSEEEG00000019716) #8 PLEKHA7 (ENSEEEG00000019715) #10 sox6 (ENSEEEG00000019712) ##12 calca (ENSEEEG00000019711) #15 CYP2R1 (ENSEEEG00000019710) #17 PDE3B (ENSEEEG00000019709) #19 copb1 (ENSEEEG00000019708) #21 rras2 (ENSEEEG00000019707) #22 ENSEEEG00000019706 TUB (ENSEEEG00000019704) ENSEEEG00000019701 Cyprinoidei ANCESTRAL SPECIES 3 ENSGT00940000166270.c ENSGT00390000017249.e ENSGT00940000158481.d ENSGT00940000157667.d ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491 #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000015672 ENSGT00940000158295 ENSGT01100000264057 ENSGT00940000164654 ENSGT00940000156113 ENSGT00940000154285.b.a.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 262 ENSGT00390000006293.n.a.b ENSGT00390000017249.e.a ENSGT00940000158481.d.b ENSGT00940000157667.d.b ENSGT00940000156620.g ENSGT00940000159662.c.a.a ENSGT00940000153438.a.t.a ENSGT00390000001927.a.b ENSGT00390000017491.a #8 ENSGT00940000155817.a.a.j #10 ENSGT00940000156433.A.d.b ##12 ENSGT00940000156267.ob.b.a #15 ENSGT00940000158305.k #17 ENSGT00940000159336.a #19 ENSGT00390000005270.f #21 ENSGT00940000155328.e #22 ENSGT00940000158372.c.b ENSGT00940000153908.b.a.b.c ENSGT00940000159050.d ENSGT00940000167685.a.a ENSGT00940000165144.b Goldfish MODERN SPECIES 25 tp53i11a (ENSCARG00000020827) cd82a (ENSCARG00000020816) tspan18a (ENSCARG00000020794) ext2 (ENSCARG00000020731) ENSCARG00000020708 caprin1a (ENSCARG00000018084) nucb2a (ENSCARG00000017575) rps13 (ENSCARG00000017545) #8 PLEKHA7 (ENSCARG00000016728) #10 sox6 (ENSCARG00000015974) ##12 ENSCARG00000015925 calca (ENSCARG00000015916) #15 CYP2R1 (ENSCARG00000015886) #17 PDE3B (ENSCARG00000015859) #19 copb1 (ENSCARG00000015845) #21 rras2 (ENSCARG00000015838) #22 pax6b (ENSCARG00000015650) elp4 (ENSCARG00000015584) immp1l (ENSCARG00000015570) ENSCARG00000015559 mpped2a (ENSCARG00000015552) TMC3 (ENSCARG00000015501) ENSCARG00000015497 IL16 (ENSCARG00000015479) mesd (ENSCARG00000015467) CEMIP (ENSCARG00000013223) abhd17c (ENSCARG00000013120) arnt2 (ENSCARG00000012046) mthfs (ENSCARG00000012009) fah (ENSCARG00000011976) MINAR1 (ENSCARG00000011964) Cyprininae_a ANCESTRAL SPECIES 60 ENSGT00390000006293.n.a.b ENSGT00390000017249.e.a ENSGT00940000158481.d.b ENSGT00940000157667.d.b ENSGT00940000156620.g ENSGT00940000159662.c.a.a ENSGT00940000153438.a.t.a ENSGT00390000001927.a.b.c ENSGT00390000017491.a #8 ENSGT00940000155817.a.a.j #10 ENSGT00940000156433.A.d.b ##12 ENSGT00940000156267.ob.a.a.h.b #15 ENSGT00940000158305.k #17 ENSGT00940000159336.a #19 ENSGT00390000005270.f #21 ENSGT00940000155328.e #22 ENSGT00940000158372.c.b ENSGT00940000153908.b.a.b.c ENSGT00940000159050.d ENSGT00940000167685.a.a ENSGT00940000159240.e.b ENSGT00950000182931.B.b.ab ENSGT00390000000819.a.ab ENSGT00940000153185.a.b.g ENSGT00390000015672.b ENSGT00940000158295.p ENSGT00940000154285.b.a.a.b.z ENSGT00730000110960.b.d ENSGT00940000160143.a.a.b ENSGT00940000164014.a.b.m.a.b.a ENSGT00530000063853.a.b.d.e Common carp reference MODERN SPECIES 6 tp53i11a (ENSCCRG00000024576) cd82a (ENSCCRG00000024586) ENSCCRG00000052998 tspan18a (ENSCCRG00000042260) ext2 (ENSCCRG00000042253) ENSCCRG00000042243 ENSCCRG00000079443 caprin1a (ENSCCRG00000020249) nucb2a (ENSCCRG00000053533) rps13 (ENSCCRG00000052912) #8 PLEKHA7 (ENSCCRG00000080933) #10 sox6 (ENSCCRG00000055090) ##12 calca (ENSCCRG00000056441) #15 PDE3B (ENSCCRG00000008656) #19 copb1 (ENSCCRG00000012321) #21 rras2 (ENSCCRG00000073777) #22 TUB (ENSCCRG00000026020) lmo1 (ENSCCRG00000071552) ENSCCRG00000072889 ENSCCRG00000062428 stk33 (ENSCCRG00000022007) rerglb (ENSCCRG00000019629) ENSCCRG00000022044 dennd2b (ENSCCRG00000007363) tmem9b (ENSCCRG00000047536) scube2 (ENSCCRG00000042690) slc7a6os (ENSCCRG00000048961) slc7a6 (ENSCCRG00000081687) ENSCCRG00000048976 adgrg1 (ENSCCRG00000000326) adgrg1 (ENSCCRG00000064830) Golden-line barbel MODERN SPECIES 75 tspan18a (ENSSGRG00000019003) ext2 (ENSSGRG00000019070) ENSSGRG00000019129 caprin1a (ENSSGRG00000019155) nucb2a (ENSSGRG00000020381) rps13 (ENSSGRG00000020637) #8 PLEKHA7 (ENSSGRG00000020663) #10 sox6 (ENSSGRG00000020703) ##12 ENSSGRG00000020829 #15 CYP2R1 (ENSSGRG00000020833) #17 PDE3B (ENSSGRG00000020915) #19 copb1 (ENSSGRG00000020919) #21 rras2 (ENSSGRG00000021025) #22 TUB (ENSSGRG00000021031) lmo1 (ENSSGRG00000021036) stk33 (ENSSGRG00000021097) rerglb (ENSSGRG00000021098) ENSSGRG00000021101 dennd2b (ENSSGRG00000021117) tmem9b (ENSSGRG00000021793) scube2 (ENSSGRG00000021811) slc7a6os (ENSSGRG00000021947) slc7a6 (ENSSGRG00000021957) adgrg1 (ENSSGRG00000021967) ccdc102a (ENSSGRG00000021977) DOK4 (ENSSGRG00000021986) ENSSGRG00000022118 ENSSGRG00000022120 Cyprininae ANCESTRAL SPECIES 1 ENSGT00390000006293.n.a.a ENSGT00390000017249.e.b ENSGT00940000158481.d.a ENSGT00940000157667.d.a ENSGT00940000156620.h ENSGT00940000159662.c.a.b ENSGT00940000153438.a.t.b ENSGT01000000220185 ENSGT00390000017491.b #8 ENSGT00940000155817.a.a.i #10 ENSGT00940000156433.A.d.a ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305.l #17 ENSGT00940000159336.b #19 ENSGT00390000005270.e #21 ENSGT00940000155328.f #22 ENSGT00940000158372.d ENSGT00940000158372.c.a.a ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.d ENSGT00940000167685.a.b ENSGT00940000159240.f ENSGT00940000159050.c ENSGT00940000159240.e.a ENSGT00950000182931.B.b.`b ENSGT00390000000819.a.bb ENSGT00940000153185.a.b.h ENSGT00390000015672.a ENSGT00940000158295.o ENSGT00940000156113.i.a ENSGT00940000154285.b.a.a.b.y.b Goldfish MODERN SPECIES 23 atp5l (ENSCARG00000013780) nherf4b (ENSCARG00000013785) ABCG4 (ENSCARG00000013824) hinfp (ENSCARG00000014388) dpagt1 (ENSCARG00000014405) c2cd2l (ENSCARG00000014433) h2ax (ENSCARG00000014442) hmbsa (ENSCARG00000014450) arcn1a (ENSCARG00000014467) ENSCARG00000014539 sox6 (ENSCARG00000014551) ##12 ENSCARG00000014574 #15 CYP2R1 (ENSCARG00000014576) #17 PDE3B (ENSCARG00000014586) #19 copb1 (ENSCARG00000014626) #21 rras2 (ENSCARG00000014651) #22 TUB (ENSCARG00000014672) ENSCARG00000014730 lmo1 (ENSCARG00000014736) stk33 (ENSCARG00000014832) rerglb (ENSCARG00000014760) ENSCARG00000014919 dennd2b (ENSCARG00000015013) ENSCARG00000016740 tmem9b (ENSCARG00000016743) scube2 (ENSCARG00000016843) slc7a6os (ENSCARG00000017662) slc7a6 (ENSCARG00000017692) ENSCARG00000017743 adgrg1 (ENSCARG00000017761) ccdc102a (ENSCARG00000017781) Cyprininae_a ANCESTRAL SPECIES 2 ENSGT00390000006293.n.a.a ENSGT00390000017249.e.b ENSGT00940000158481.d.a ENSGT00940000157667.d.a ENSGT00940000156620.h ENSGT00940000159662.c.a.b ENSGT00940000153438.a.t.b ENSGT00390000001927.a.b.d ENSGT00390000017491.b #8 ENSGT00940000155817.a.a.i #10 ENSGT00940000156433.A.d.a ##12 ENSGT00940000156267.ob.a.a.h.a #15 ENSGT00940000158305.l #17 ENSGT00940000159336.b #19 ENSGT00390000005270.e #21 ENSGT00940000155328.f #22 ENSGT00940000158372.d ENSGT00940000158372.c.a.b ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.d ENSGT00940000159050.c ENSGT00940000167685.a.b ENSGT00940000159240.e.a ENSGT00950000182931.B.b.`b ENSGT00390000000819.a.bb ENSGT00940000153185.a.b.h ENSGT00390000015672.a ENSGT00940000158295.o ENSGT00940000156113.i.a ENSGT00940000154285.b.a.a.b.y.b ENSGT00730000110960.b.c Common carp reference MODERN SPECIES hsbp1a (ENSCCRG00000022855) ENSCCRG00000022860 tp53i11a (ENSCCRG00000003915) cd82a (ENSCCRG00000003921) tspan18a (ENSCCRG00000024593) ext2 (ENSCCRG00000049205) ENSCCRG00000082339 caprin1a (ENSCCRG00000025841) nucb2a (ENSCCRG00000023898) ENSCCRG00000023879 #10 sox6 (ENSCCRG00000048121) ##12 calca (ENSCCRG00000008685) #15 CYP2R1 (ENSCCRG00000008663) #17 PDE3B (ENSCCRG00000055510) #19 copb1 (ENSCCRG00000031272) #21 rras2 (ENSCCRG00000081497) #22 TUB (ENSCCRG00000007387) lmo1 (ENSCCRG00000007375) stk33 (ENSCCRG00000019635) rerglb (ENSCCRG00000069535) TRIM66 (ENSCCRG00000007365) dennd2b (ENSCCRG00000004820) tmem9b (ENSCCRG00000007361) scube2 (ENSCCRG00000006876) slc7a6os (ENSCCRG00000006845) slc7a6 (ENSCCRG00000048967) ENSCCRG00000006839 adgrg1 (ENSCCRG00000006837) ccdc102a (ENSCCRG00000036696) DOK4 (ENSCCRG00000030917) ENSCCRG00000075448 Golden-line barbel MODERN SPECIES 9 tp53i11a (ENSSGRG00000031578) cd82a (ENSSGRG00000031576) tspan18a (ENSSGRG00000031575) ext2 (ENSSGRG00000031158) ENSSGRG00000031142 caprin1a (ENSSGRG00000031141) nucb2a (ENSSGRG00000031136) rps13 (ENSSGRG00000031118) #8 PLEKHA7 (ENSSGRG00000031113) #10 sox6 (ENSSGRG00000030754) ##12 ENSSGRG00000030744 #15 ENSSGRG00000030743 ENSSGRG00000030742 #17 PDE3B (ENSSGRG00000030741) #19 copb1 (ENSSGRG00000030619) #21 rras2 (ENSSGRG00000030613) #22 ENSSGRG00000030612 ENSSGRG00000030611 lmo1 (ENSSGRG00000030610) stk33 (ENSSGRG00000030608) rerglb (ENSSGRG00000030607) ENSSGRG00000030606 dennd2b (ENSSGRG00000030206) tmem9b (ENSSGRG00000030202) scube2 (ENSSGRG00000030115) slc7a6os (ENSSGRG00000030114) slc7a6 (ENSSGRG00000030113) slc7a6 (ENSSGRG00000030112) slc7a6 (ENSSGRG00000030111) adgrg1 (ENSSGRG00000030109) ccdc102a (ENSSGRG00000030108) Zebrafish MODERN SPECIES 22 ENSDARG00000112250 cd82a (ENSDARG00000019098) tspan18a (ENSDARG00000056656) si:ch211-107p11.3 (ENSDARG00000103000) ext2 (ENSDARG00000056648) ALX4 (ENSDARG00000088332) caprin1a (ENSDARG00000009346) nucb2a (ENSDARG00000036299) rps13 (ENSDARG00000036298) #8 PLEKHA7 (ENSDARG00000062220) #10 sox6 (ENSDARG00000015536) ##12 CYP2R1 (ENSDARG00000056587) #17 calca (ENSDARG00000056590) #15 PDE3B (ENSDARG00000062190) #19 copb1 (ENSDARG00000056557) #21 rras2 (ENSDARG00000036252) #22 TUB (ENSDARG00000062165) RIC3 (ENSDARG00000105549) lmo1 (ENSDARG00000034504) stk33 (ENSDARG00000054318) rerglb (ENSDARG00000054324) ENSDARG00000054332 dennd2b (ENSDARG00000037363) tmem9b (ENSDARG00000025693) scube2 (ENSDARG00000037362) slc7a6os (ENSDARG00000010596) slc7a6 (ENSDARG00000054423) ENSDARG00000105643 adgrg1 (ENSDARG00000027222) ccdc102a (ENSDARG00000003872) DOK4 (ENSDARG00000073731) Euteleosteomorpha ANCESTRAL SPECIES 48 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000167685.a ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000157584.a.b Acanthomorphata ANCESTRAL SPECIES 18 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00940000155385 Euacanthomorphacea ANCESTRAL SPECIES 23 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Pinecone sodierfish MODERN SPECIES 17 CPSF7 (ENSMMDG00005000159) polr2l (ENSMMDG00005000150) DAGLA (ENSMMDG00005000118) ext2 (ENSMMDG00005023325) ALX4 (ENSMMDG00005023319) caprin1a (ENSMMDG00005022765) nucb2a (ENSMMDG00005022743) PLEKHA7 (ENSMMDG00005022715) #10 sox6 (ENSMMDG00005022612) ##12 ENSMMDG00005022600 calca (ENSMMDG00005022599) #15 CYP2R1 (ENSMMDG00005022598) #17 PDE3B (ENSMMDG00005022591) #19 PSMA1 (ENSMMDG00005022583) #20 copb1 (ENSMMDG00005022582) #21 rras2 (ENSMMDG00005022581) #22 TUB (ENSMMDG00005022579) ENSMMDG00005022577 lmo1 (ENSMMDG00005022576) stk33 (ENSMMDG00005022575) rerglb (ENSMMDG00005022574) ENSMMDG00005022573 dennd2b (ENSMMDG00005022027) tmem9b (ENSMMDG00005021997) scube2 (ENSMMDG00005021994) sinhcafl (ENSMMDG00005021993) ##13 DENND5A (ENSMMDG00005021607) tmem41b (ENSMMDG00005021583) ipo7 (ENSMMDG00005020804) SWAP70 (ENSMMDG00005020760) SBF2 (ENSMMDG00005018848) Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Tiger tail seahorse MODERN SPECIES 348 fgf7 (ENSHCOG00000001786) dtwd1 (ENSHCOG00000001789) ENSHCOG00000001810 spata5l1 (ENSHCOG00000001837) zgc:153317 (ENSHCOG00000001848) slc30a4 (ENSHCOG00000001861) bloc1s6 (ENSHCOG00000001868) mibp2 (ENSHCOG00000001880) PLEKHA7 (ENSHCOG00000001917) #10 sox6 (ENSHCOG00000001950) ##12 ENSHCOG00000001959 ENSHCOG00000001967 #15 CYP2R1 (ENSHCOG00000001974) #17 PDE3B (ENSHCOG00000002003) #19 copb1 (ENSHCOG00000002030) #21 rras2 (ENSHCOG00000002043) #22 TUB (ENSHCOG00000002052) ENSHCOG00000002058 lmo1 (ENSHCOG00000002066) stk33 (ENSHCOG00000002089) ENSHCOG00000002109 dennd2b (ENSHCOG00000002128) tmem9b (ENSHCOG00000002143) scube2 (ENSHCOG00000002173) sinhcafl (ENSHCOG00000002186) ##13 DENND5A (ENSHCOG00000002214) tmem41b (ENSHCOG00000002229) ipo7 (ENSHCOG00000002290) SWAP70 (ENSHCOG00000002322) SBF2 (ENSHCOG00000002360) adma (ENSHCOG00000002374) Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Eupercaria ANCESTRAL SPECIES 14 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Fugu MODERN SPECIES 4 sdhaf2 (ENSTRUG00000017290) CPSF7 (ENSTRUG00000017291) polr2l (ENSTRUG00000017292) ENSTRUG00000023768 DAGLA (ENSTRUG00000017293) ext2 (ENSTRUG00000017294) ALX4 (ENSTRUG00000017295) caprin1a (ENSTRUG00000017296) nucb2a (ENSTRUG00000017297) PLEKHA7 (ENSTRUG00000017298) #10 sox6 (ENSTRUG00000017299) ##12 CALCB (ENSTRUG00000017300) #15 CYP2R1 (ENSTRUG00000017301) #17 PDE3B (ENSTRUG00000017302) #19 copb1 (ENSTRUG00000017376) #21 rras2 (ENSTRUG00000017384) #22 TUB (ENSTRUG00000017386) RIC3 (ENSTRUG00000020473) lmo1 (ENSTRUG00000025019) stk33 (ENSTRUG00000017389) TRIM66 (ENSTRUG00000017390) dennd2b (ENSTRUG00000017392) tmem9b (ENSTRUG00000020101) scube2 (ENSTRUG00000017398) sinhcafl (ENSTRUG00000017404) ##13 DENND5A (ENSTRUG00000017407) tmem41b (ENSTRUG00000017412) ipo7 (ENSTRUG00000017414) SWAP70 (ENSTRUG00000017420) SBF2 (ENSTRUG00000017424) adm (ENSTRUG00000017432) Tetraodon MODERN SPECIES 20 saa (ENSTNIG00000009393) syt7b (ENSTNIG00000009392) sdhaf2 (ENSTNIG00000009391) DAGLA (ENSTNIG00000009390) ext2 (ENSTNIG00000009389) ALX4 (ENSTNIG00000009388) caprin1a (ENSTNIG00000009387) nucb2a (ENSTNIG00000009386) PLEKHA7 (ENSTNIG00000009385) #10 sox6 (ENSTNIG00000009384) ##12 CALCB (ENSTNIG00000009383) #15 CYP2R1 (ENSTNIG00000009382) #17 PDE3B (ENSTNIG00000009381) #19 ENSTNIG00000001433 copb1 (ENSTNIG00000009380) #21 rras2 (ENSTNIG00000009379) #22 TUB (ENSTNIG00000009378) lmo1 (ENSTNIG00000009377) stk33 (ENSTNIG00000009376) ENSTNIG00000000247 dennd2b (ENSTNIG00000009375) tmem9b (ENSTNIG00000009374) scube2 (ENSTNIG00000009373) sinhcafl (ENSTNIG00000009372) ##13 DENND5A (ENSTNIG00000009371) tmem41b (ENSTNIG00000009370) ipo7 (ENSTNIG00000009369) SWAP70 (ENSTNIG00000009368) adma (ENSTNIG00000009367) AMPD3 (ENSTNIG00000009366) IRAG1 (ENSTNIG00000009365) Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Ballan wrasse MODERN SPECIES 48 sdhaf2 (ENSLBEG00000000968) CPSF7 (ENSLBEG00000000947) polr2l (ENSLBEG00000000928) ENSLBEG00000000914 DAGLA (ENSLBEG00000000821) ext2 (ENSLBEG00000000758) ALX4 (ENSLBEG00000000727) caprin1a (ENSLBEG00000000710) nucb2a (ENSLBEG00000000656) PLEKHA7 (ENSLBEG00000000325) #10 sox6 (ENSLBEG00000000268) ##12 ENSLBEG00000000244 #15 CYP2R1 (ENSLBEG00000000211) #17 PDE3B (ENSLBEG00000000172) #19 copb1 (ENSLBEG00000000137) #21 rras2 (ENSLBEG00000000119) #22 TUB (ENSLBEG00000000106) RIC3 (ENSLBEG00000000100) lmo1 (ENSLBEG00000000093) stk33 (ENSLBEG00000000088) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Large yellow croaker MODERN SPECIES 480 syt7b (ENSLCRG00005013187) sdhaf2 (ENSLCRG00005013215) CPSF7 (ENSLCRG00005013217) polr2l (ENSLCRG00005013218) DAGLA (ENSLCRG00005013220) ext2 (ENSLCRG00005013236) ALX4 (ENSLCRG00005013241) caprin1a (ENSLCRG00005013255) nucb2a (ENSLCRG00005014587) PLEKHA7 (ENSLCRG00005015417) #10 sox6 (ENSLCRG00005015425) ##12 ENSLCRG00005015434 #15 CYP2R1 (ENSLCRG00005015435) #17 PDE3B (ENSLCRG00005015439) #19 copb1 (ENSLCRG00005015538) #21 rras2 (ENSLCRG00005015540) #22 TUB (ENSLCRG00005015541) RIC3 (ENSLCRG00005015544) lmo1 (ENSLCRG00005015545) stk33 (ENSLCRG00005015548) ENSLCRG00005015550 dennd2b (ENSLCRG00005015564) tmem9b (ENSLCRG00005016407) scube2 (ENSLCRG00005016438) sinhcafl (ENSLCRG00005016620) ##13 DENND5A (ENSLCRG00005016636) tmem41b (ENSLCRG00005017916) ipo7 (ENSLCRG00005017940) SWAP70 (ENSLCRG00005019620) SBF2 (ENSLCRG00005019727) adma (ENSLCRG00005021500) European seabass MODERN SPECIES 18 syt7b (ENSDLAG00005019561) sdhaf2 (ENSDLAG00005030591) CPSF7 (ENSDLAG00005019535) polr2l (ENSDLAG00005031213) ENSDLAG00005019367 ext2 (ENSDLAG00005019254) ENSDLAG00005019233 caprin1a (ENSDLAG00005018166) nucb2a (ENSDLAG00005017934) ENSDLAG00005017874 #10 sox6 (ENSDLAG00005017369) ##12 calca (ENSDLAG00005017334) #15 CYP2R1 (ENSDLAG00005034603) #17 PDE3B (ENSDLAG00005017137) #19 copb1 (ENSDLAG00005017085) #21 rras2 (ENSDLAG00005032870) #22 TUB (ENSDLAG00005017003) RIC3 (ENSDLAG00005032674) lmo1 (ENSDLAG00005016969) stk33 (ENSDLAG00005016958) TRIM66 (ENSDLAG00005016936) dennd2b (ENSDLAG00005015341) tmem9b (ENSDLAG00005015299) scube2 (ENSDLAG00005013076) sinhcafl (ENSDLAG00005032279) ##13 DENND5A (ENSDLAG00005010450) tmem41b (ENSDLAG00005010335) ipo7 (ENSDLAG00005008963) SWAP70 (ENSDLAG00005008802) SBF2 (ENSDLAG00005001773) adma (ENSDLAG00005029133) Gilthead seabream MODERN SPECIES 18 syt7b (ENSSAUG00010011162) sdhaf2 (ENSSAUG00010011180) CPSF7 (ENSSAUG00010004091) polr2l (ENSSAUG00010004131) DAGLA (ENSSAUG00010004181) ext2 (ENSSAUG00010004268) ALX4 (ENSSAUG00010004387) caprin1a (ENSSAUG00010004436) nucb2a (ENSSAUG00010005700) PLEKHA7 (ENSSAUG00010006491) #10 sox6 (ENSSAUG00010006529) ##12 calca (ENSSAUG00010008292) #15 CYP2R1 (ENSSAUG00010008295) #17 PDE3B (ENSSAUG00010008307) #19 copb1 (ENSSAUG00010008362) #21 rras2 (ENSSAUG00010008363) #22 TUB (ENSSAUG00010008364) RIC3 (ENSSAUG00010008370) lmo1 (ENSSAUG00010008374) stk33 (ENSSAUG00010008384) TRIM66 (ENSSAUG00010008391) dennd2b (ENSSAUG00010008436) tmem9b (ENSSAUG00010010941) scube2 (ENSSAUG00010010985) sinhcafl (ENSSAUG00010013496) ##13 DENND5A (ENSSAUG00010013524) tmem41b (ENSSAUG00010014709) ipo7 (ENSSAUG00010014722) SWAP70 (ENSSAUG00010014791) SBF2 (ENSSAUG00010014929) adma (ENSSAUG00010017791) Perciformes ANCESTRAL SPECIES 15 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Perciformes_a ANCESTRAL SPECIES 13 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Channel bull blenny MODERN SPECIES 17 CPSF7 (ENSCGOG00000004034) polr2l (ENSCGOG00000004035) ENSCGOG00000004039 DAGLA (ENSCGOG00000004045) ext2 (ENSCGOG00000004831) ALX4 (ENSCGOG00000005568) caprin1a (ENSCGOG00000005582) nucb2a (ENSCGOG00000006048) PLEKHA7 (ENSCGOG00000006121) #10 sox6 (ENSCGOG00000006214) ##12 CALCB (ENSCGOG00000008263) #15 CYP2R1 (ENSCGOG00000008264) #17 PDE3B (ENSCGOG00000008266) #19 copb1 (ENSCGOG00000008350) #21 ENSCGOG00000008797 rras2 (ENSCGOG00000008799) #22 TUB (ENSCGOG00000008809) ENSCGOG00000008825 lmo1 (ENSCGOG00000008827) stk33 (ENSCGOG00000008845) ENSCGOG00000008887 dennd2b (ENSCGOG00000008923) tmem9b (ENSCGOG00000009038) scube2 (ENSCGOG00000009116) sinhcafl (ENSCGOG00000010488) ##13 DENND5A (ENSCGOG00000010542) tmem41b (ENSCGOG00000012081) ipo7 (ENSCGOG00000012162) SWAP70 (ENSCGOG00000015390) SBF2 (ENSCGOG00000015550) adma (ENSCGOG00000019593) Pike perch MODERN SPECIES 44 sdhaf2 (ENSSLUG00000012188) CPSF7 (ENSSLUG00000012191) polr2l (ENSSLUG00000012195) DAGLA (ENSSLUG00000012211) ext2 (ENSSLUG00000012275) ENSSLUG00000012319 ALX4 (ENSSLUG00000012337) caprin1a (ENSSLUG00000012368) nucb2a (ENSSLUG00000012795) PLEKHA7 (ENSSLUG00000013293) #10 sox6 (ENSSLUG00000013345) ##12 CALCB (ENSSLUG00000013863) #15 CYP2R1 (ENSSLUG00000013870) #17 PDE3B (ENSSLUG00000013881) #19 copb1 (ENSSLUG00000013896) #21 rras2 (ENSSLUG00000013916) #22 TUB (ENSSLUG00000013926) ENSSLUG00000013971 lmo1 (ENSSLUG00000013978) stk33 (ENSSLUG00000013988) ENSSLUG00000013998 dennd2b (ENSSLUG00000014116) tmem9b (ENSSLUG00000016215) scube2 (ENSSLUG00000016381) sinhcafl (ENSSLUG00000018522) ##13 DENND5A (ENSSLUG00000018560) tmem41b (ENSSLUG00000018891) ipo7 (ENSSLUG00000019033) SWAP70 (ENSSLUG00000021016) SBF2 (ENSSLUG00000021229) adma (ENSSLUG00000024140) Cottioidei ANCESTRAL SPECIES 13 ENSGT01060000248781 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Stickleback MODERN SPECIES 1 ENSGACG00000015593 sdhaf2 (ENSGACG00000015595) ENSGACG00000015600 ENSGACG00000015602 DAGLA (ENSGACG00000015603) ext2 (ENSGACG00000015605) ALX4 (ENSGACG00000015616) caprin1a (ENSGACG00000015620) nucb2a (ENSGACG00000015626) PLEKHA7 (ENSGACG00000015632) #10 sox6 (ENSGACG00000015635) ##12 CALCB (ENSGACG00000015637) #15 CYP2R1 (ENSGACG00000015638) #17 PDE3B (ENSGACG00000015640) #19 copb1 (ENSGACG00000015643) #21 rras2 (ENSGACG00000015645) #22 TUB (ENSGACG00000015648) RIC3 (ENSGACG00000015652) lmo1 (ENSGACG00000015653) stk33 (ENSGACG00000015654) ENSGACG00000015655 dennd2b (ENSGACG00000015658) tmem9b (ENSGACG00000015661) scube2 (ENSGACG00000015663) sinhcafl (ENSGACG00000015667) ##13 DENND5A (ENSGACG00000015671) tmem41b (ENSGACG00000015676) ipo7 (ENSGACG00000015677) SWAP70 (ENSGACG00000015680) SBF2 (ENSGACG00000015683) adma (ENSGACG00000015691) Lumpfish MODERN SPECIES 18 ENSCLMG00005009051 ENSCLMG00005009053 ENSCLMG00005009055 ENSCLMG00005009056 DAGLA (ENSCLMG00005009058) ext2 (ENSCLMG00005009063) ALX4 (ENSCLMG00005009092) caprin1a (ENSCLMG00005009094) nucb2a (ENSCLMG00005009759) PLEKHA7 (ENSCLMG00005010399) #10 sox6 (ENSCLMG00005010404) ##12 calca (ENSCLMG00005010405) #15 CYP2R1 (ENSCLMG00005010406) #17 PDE3B (ENSCLMG00005010411) #19 copb1 (ENSCLMG00005010475) #21 rras2 (ENSCLMG00005010478) #22 TUB (ENSCLMG00005010487) ENSCLMG00005010492 lmo1 (ENSCLMG00005010493) stk33 (ENSCLMG00005010495) ENSCLMG00005010496 dennd2b (ENSCLMG00005003058) tmem9b (ENSCLMG00005006449) scube2 (ENSCLMG00005006464) sinhcafl (ENSCLMG00005007927) ##13 DENND5A (ENSCLMG00005007952) tmem41b (ENSCLMG00005008161) ipo7 (ENSCLMG00005008187) SWAP70 (ENSCLMG00005011020) SBF2 (ENSCLMG00005011620) adma (ENSCLMG00005013808) Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Carangaria ANCESTRAL SPECIES 11 ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Carangaria_A ANCESTRAL SPECIES 19 ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Seriola ANCESTRAL SPECIES 83 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000169123 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00390000013048 ENSGT00940000159184 ENSGT00950000183186.B.a ENSGT00940000157223.l.a #35 Greater amberjack MODERN SPECIES 176 sox6 (ENSSDUG00000023097) ##12 CALCB (ENSSDUG00000023124) #15 CYP2R1 (ENSSDUG00000023131) #17 PDE3B (ENSSDUG00000023138) #19 copb1 (ENSSDUG00000023149) #21 rras2 (ENSSDUG00000023163) #22 TUB (ENSSDUG00000023166) ENSSDUG00000023169 lmo1 (ENSSDUG00000023172) stk33 (ENSSDUG00000023176) rerglb (ENSSDUG00000023180) TRIM66 (ENSSDUG00000023187) dennd2b (ENSSDUG00000023193) tmem9b (ENSSDUG00000023201) scube2 (ENSSDUG00000023204) sinhcafl (ENSSDUG00000023216) ##13 DENND5A (ENSSDUG00000023223) bola3 (ENSSDUG00000023266) vat1l (ENSSDUG00000023272) CLEC3A (ENSSDUG00000023277) usp47 (ENSSDUG00000023282) #35 Yellowtail amberjack MODERN SPECIES 2706 sox6 (ENSSLDG00000015372) ##12 ENSSLDG00000015356 ENSSLDG00000015343 #15 CYP2R1 (ENSSLDG00000015307) #17 PDE3B (ENSSLDG00000015229) #19 copb1 (ENSSLDG00000015155) #21 rras2 (ENSSLDG00000015122) #22 TUB (ENSSLDG00000015076) RIC3 (ENSSLDG00000015054) lmo1 (ENSSLDG00000015042) stk33 (ENSSLDG00000014937) rerglb (ENSSLDG00000014923) ENSSLDG00000014895 Barramundi perch MODERN SPECIES 300 nucb2a (ENSLCAG00010018287) ENSLCAG00010018346 PLEKHA7 (ENSLCAG00010012396) #10 sox6 (ENSLCAG00010012436) ##12 calca (ENSLCAG00010012488) #15 CYP2R1 (ENSLCAG00010012493) #17 PDE3B (ENSLCAG00010012500) #19 copb1 (ENSLCAG00010012518) #21 rras2 (ENSLCAG00010012550) #22 TUB (ENSLCAG00010012567) ENSLCAG00010012588 ENSLCAG00010012594 lmo1 (ENSLCAG00010012600) stk33 (ENSLCAG00010012612) rerglb (ENSLCAG00010012617) Pleuronectoidei ANCESTRAL SPECIES 10 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Turbot MODERN SPECIES 17 syt7b (ENSSMAG00000021389) SDHAF2 (ENSSMAG00000032850) CPSF7 (ENSSMAG00000021391) polr2l (ENSSMAG00000021392) ENSSMAG00000021394 ext2 (ENSSMAG00000021395) ENSSMAG00000027799 caprin1a (ENSSMAG00000021397) nucb2a (ENSSMAG00000021398) ENSSMAG00000021399 #10 sox6 (ENSSMAG00000021400) ##12 calca (ENSSMAG00000021401) #15 CYP2R1 (ENSSMAG00000021403) #17 PDE3B (ENSSMAG00000021404) #19 copb1 (ENSSMAG00000021405) #21 rras2 (ENSSMAG00000021406) #22 TUB (ENSSMAG00000021407) ENSSMAG00000021408 ENSSMAG00000029486 lmo1 (ENSSMAG00000021409) stk33 (ENSSMAG00000021410) dennd2b (ENSSMAG00000021412) tmem9b (ENSSMAG00000021413) scube2 (ENSSMAG00000021414) sinhcafl (ENSSMAG00000021415) ##13 DENND5A (ENSSMAG00000021416) tmem41b (ENSSMAG00000021417) ipo7 (ENSSMAG00000021418) SWAP70 (ENSSMAG00000021419) SBF2 (ENSSMAG00000021420) adma (ENSSMAG00000021421) Tongue sole MODERN SPECIES 15 mrpl46 (ENSCSEG00000010621) mrps11 (ENSCSEG00000010615) PDPR (ENSCSEG00000010593) ENSCSEG00000010588 KIF13B (ENSCSEG00000010552) hmbox1a (ENSCSEG00000010331) TDP1 (ENSCSEG00000010313) eprs1 (ENSCSEG00000010266) ENSCSEG00000010238 ENSCSEG00000010205 ENSCSEG00000010157 CALCB (ENSCSEG00000010146) #15 CYP2R1 (ENSCSEG00000010133) #17 PDE3B (ENSCSEG00000010095) #19 copb1 (ENSCSEG00000009999) #21 rras2 (ENSCSEG00000009987) #22 TUB (ENSCSEG00000009890) RIC3 (ENSCSEG00000009853) lmo1 (ENSCSEG00000009835) stk33 (ENSCSEG00000009822) ENSCSEG00000009769 dennd2b (ENSCSEG00000009741) tmem9b (ENSCSEG00000009728) scube2 (ENSCSEG00000009659) sinhcafl (ENSCSEG00000009639) ##13 DENND5A (ENSCSEG00000009531) tmem41b (ENSCSEG00000009499) ipo7 (ENSCSEG00000009451) SWAP70 (ENSCSEG00000009427) SHANK2 (ENSCSEG00000009384) ENSCSEG00000009199 Anabantaria ANCESTRAL SPECIES 11 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Zig-zag eel MODERN SPECIES 17 syt7b (ENSMAMG00000021940) SDHAF2 (ENSMAMG00000026302) CPSF7 (ENSMAMG00000027575) polr2l (ENSMAMG00000021937) ENSMAMG00000021929 ext2 (ENSMAMG00000021926) ENSMAMG00000021923 caprin1a (ENSMAMG00000021922) nucb2a (ENSMAMG00000021919) ENSMAMG00000021898 #10 sox6 (ENSMAMG00000021887) ##12 calca (ENSMAMG00000021885) #15 CYP2R1 (ENSMAMG00000021884) #17 PDE3B (ENSMAMG00000021879) #19 copb1 (ENSMAMG00000021871) #21 rras2 (ENSMAMG00000021869) #22 TUB (ENSMAMG00000021864) RIC3 (ENSMAMG00000021862) lmo1 (ENSMAMG00000021859) stk33 (ENSMAMG00000021855) TRIM66 (ENSMAMG00000021850) dennd2b (ENSMAMG00000021844) tmem9b (ENSMAMG00000025772) scube2 (ENSMAMG00000021823) sinhcafl (ENSMAMG00000026792) ##13 DENND5A (ENSMAMG00000021813) tmem41b (ENSMAMG00000026489) ipo7 (ENSMAMG00000021798) SWAP70 (ENSMAMG00000021793) SBF2 (ENSMAMG00000021769) adma (ENSMAMG00000027983) Anabantoidei ANCESTRAL SPECIES 8 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Siamese fighting fish MODERN SPECIES 14 ENSBSLG00000017432 syt7b (ENSBSLG00000017410) sdhaf2 (ENSBSLG00000017357) CPSF7 (ENSBSLG00000017339) polr2l (ENSBSLG00000017332) DAGLA (ENSBSLG00000016863) ext2 (ENSBSLG00000016692) ENSBSLG00000016587 caprin1a (ENSBSLG00000016072) nucb2a (ENSBSLG00000015766) sox6 (ENSBSLG00000014744) ##12 CALCB (ENSBSLG00000014521) #15 CYP2R1 (ENSBSLG00000014506) #17 PDE3B (ENSBSLG00000014387) #19 copb1 (ENSBSLG00000014352) #21 rras2 (ENSBSLG00000014338) #22 TUB (ENSBSLG00000014192) ENSBSLG00000014165 lmo1 (ENSBSLG00000014112) rerglb (ENSBSLG00000014040) stk33 (ENSBSLG00000013941) rerglb (ENSBSLG00000013924) ENSBSLG00000013878 dennd2b (ENSBSLG00000013534) tmem9b (ENSBSLG00000013477) scube2 (ENSBSLG00000012912) sinhcafl (ENSBSLG00000012894) ##13 DENND5A (ENSBSLG00000012403) tmem41b (ENSBSLG00000012348) ipo7 (ENSBSLG00000011786) SWAP70 (ENSBSLG00000011250) Climbing perch MODERN SPECIES 16 SDHAF2 (ENSATEG00000029270) CPSF7 (ENSATEG00000007933) polr2l (ENSATEG00000007953) ENSATEG00000007918 ENSATEG00000007759 ext2 (ENSATEG00000007734) ENSATEG00000007712 caprin1a (ENSATEG00000007707) nucb2a (ENSATEG00000007694) ENSATEG00000007669 #10 sox6 (ENSATEG00000007608) ##12 CALCB (ENSATEG00000007554) #15 CYP2R1 (ENSATEG00000007487) #17 PDE3B (ENSATEG00000007413) #19 copb1 (ENSATEG00000007324) #21 rras2 (ENSATEG00000007298) #22 ENSATEG00000007238 lmo1 (ENSATEG00000007205) stk33 (ENSATEG00000007149) rerglb (ENSATEG00000007128) ENSATEG00000007117 dennd2b (ENSATEG00000007084) tmem9b (ENSATEG00000007072) scube2 (ENSATEG00000006788) sinhcafl (ENSATEG00000006747) ##13 DENND5A (ENSATEG00000006618) tmem41b (ENSATEG00000006603) ipo7 (ENSATEG00000006501) ENSATEG00000006481 adma (ENSATEG00000006323) ENSATEG00000006346 Ovalentaria ANCESTRAL SPECIES 17 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Cichlidae ANCESTRAL SPECIES 11 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 13 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Haplochromini ANCESTRAL SPECIES 11 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t.h ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Burton s mouthbrooder MODERN SPECIES 474 calca (ENSHBUG00000016239) #15 ENSHBUG00000016250 CYP2R1 (ENSHBUG00000016278) #17 PDE3B (ENSHBUG00000016413) #19 copb1 (ENSHBUG00000016504) #21 rras2 (ENSHBUG00000016534) #22 TUB (ENSHBUG00000016564) ENSHBUG00000016579 lmo1 (ENSHBUG00000000484) stk33 (ENSHBUG00000016608) ENSHBUG00000016636 dennd2b (ENSHBUG00000016667) tmem9b (ENSHBUG00000016680) scube2 (ENSHBUG00000016842) sinhcafl (ENSHBUG00000016962) ##13 DENND5A (ENSHBUG00000017183) tmem41b (ENSHBUG00000017211) ipo7 (ENSHBUG00000017323) SWAP70 (ENSHBUG00000017382) SBF2 (ENSHBUG00000017740) adma (ENSHBUG00000017782) Haplochromini_A ANCESTRAL SPECIES 10 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t.h ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t.h ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Eastern happy MODERN SPECIES sdhaf2 (ENSACLG00000026674) CPSF7 (ENSACLG00000026682) polr2l (ENSACLG00000026685) DAGLA (ENSACLG00000026695) ext2 (ENSACLG00000026711) ALX4 (ENSACLG00000026733) caprin1a (ENSACLG00000026749) nucb2a (ENSACLG00000026768) PLEKHA7 (ENSACLG00000026819) #10 sox6 (ENSACLG00000026956) ##12 ENSACLG00000026970 calca (ENSACLG00000026975) #15 CYP2R1 (ENSACLG00000026988) #17 PDE3B (ENSACLG00000026994) #19 copb1 (ENSACLG00000027011) #21 rras2 (ENSACLG00000027042) #22 TUB (ENSACLG00000027049) RIC3 (ENSACLG00000027074) lmo1 (ENSACLG00000027080) stk33 (ENSACLG00000027094) TRIM66 (ENSACLG00000027111) dennd2b (ENSACLG00000027150) tmem9b (ENSACLG00000027175) scube2 (ENSACLG00000027178) sinhcafl (ENSACLG00000027189) ##13 DENND5A (ENSACLG00000027199) tmem41b (ENSACLG00000027232) ipo7 (ENSACLG00000027247) ENSACLG00000027274 SWAP70 (ENSACLG00000027276) SBF2 (ENSACLG00000027297) Zebra mbuna MODERN SPECIES 1091 syt7b (ENSMZEG00005001011) sdhaf2 (ENSMZEG00005000974) polr2l (ENSMZEG00005000960) CPSF7 (ENSMZEG00005000950) DAGLA (ENSMZEG00005000821) ext2 (ENSMZEG00005000775) ALX4 (ENSMZEG00005000742) caprin1a (ENSMZEG00005000729) nucb2a (ENSMZEG00005000690) PLEKHA7 (ENSMZEG00005000525) #10 sox6 (ENSMZEG00005000447) ##12 calca (ENSMZEG00005000425) #15 CYP2R1 (ENSMZEG00005000377) #17 PDE3B (ENSMZEG00005000283) #19 copb1 (ENSMZEG00005000156) #21 rras2 (ENSMZEG00005000111) #22 TUB (ENSMZEG00005015392) RIC3 (ENSMZEG00005015374) ENSMZEG00005015364 ENSMZEG00005015344 lmo1 (ENSMZEG00005015333) stk33 (ENSMZEG00005015283) TRIM66 (ENSMZEG00005015236) dennd2b (ENSMZEG00005015192) tmem9b (ENSMZEG00005015170) scube2 (ENSMZEG00005015155) sinhcafl (ENSMZEG00005015146) ##13 DENND5A (ENSMZEG00005015088) tmem41b (ENSMZEG00005015077) ipo7 (ENSMZEG00005015042) SWAP70 (ENSMZEG00005015016) P. nyererei MODERN SPECIES 306 syt7b (ENSPNYG00000007249) sdhaf2 (ENSPNYG00000007311) ENSPNYG00000007340 polr2l (ENSPNYG00000007348) DAGLA (ENSPNYG00000007370) ext2 (ENSPNYG00000007448) ALX4 (ENSPNYG00000007550) caprin1a (ENSPNYG00000007569) nucb2a (ENSPNYG00000007624) PLEKHA7 (ENSPNYG00000007691) #10 sox6 (ENSPNYG00000007769) ##12 CALCB (ENSPNYG00000007794) #15 CYP2R1 (ENSPNYG00000007806) #17 PDE3B (ENSPNYG00000007825) #19 copb1 (ENSPNYG00000007884) #21 rras2 (ENSPNYG00000007953) #22 TUB (ENSPNYG00000007978) RIC3 (ENSPNYG00000007996) lmo1 (ENSPNYG00000008010) stk33 (ENSPNYG00000008037) TRIM66 (ENSPNYG00000008112) dennd2b (ENSPNYG00000008157) tmem9b (ENSPNYG00000008202) scube2 (ENSPNYG00000008225) sinhcafl (ENSPNYG00000008260) ##13 DENND5A (ENSPNYG00000008396) tmem41b (ENSPNYG00000008486) ipo7 (ENSPNYG00000008534) SWAP70 (ENSPNYG00000008636) SBF2 (ENSPNYG00000008716) adma (ENSPNYG00000008895) Lyretail cichlid MODERN SPECIES 290 syt7b (ENSNBRG00000013882) sdhaf2 (ENSNBRG00000013853) polr2l (ENSNBRG00000013837) ENSNBRG00000013826 DAGLA (ENSNBRG00000013773) ext2 (ENSNBRG00000013717) ALX4 (ENSNBRG00000013693) caprin1a (ENSNBRG00000013368) nucb2a (ENSNBRG00000013306) PLEKHA7 (ENSNBRG00000013253) #10 sox6 (ENSNBRG00000013205) ##12 ENSNBRG00000013125 #15 CYP2R1 (ENSNBRG00000013106) #17 PDE3B (ENSNBRG00000013064) #19 copb1 (ENSNBRG00000012995) #21 rras2 (ENSNBRG00000012974) #22 TUB (ENSNBRG00000012942) RIC3 (ENSNBRG00000012924) lmo1 (ENSNBRG00000012913) stk33 (ENSNBRG00000012858) ENSNBRG00000012810 dennd2b (ENSNBRG00000012683) tmem9b (ENSNBRG00000012657) scube2 (ENSNBRG00000012484) sinhcafl (ENSNBRG00000012359) ##13 DENND5A (ENSNBRG00000012269) tmem41b (ENSNBRG00000012252) ENSNBRG00000012247 ipo7 (ENSNBRG00000012192) SWAP70 (ENSNBRG00000012058) SBF2 (ENSNBRG00000011942) Nile tilapia MODERN SPECIES syt7b (ENSONIG00000006207) sdhaf2 (ENSONIG00000006203) cpsf7 (ENSONIG00000006199) polr2l (ENSONIG00000038215) DAGLA (ENSONIG00000006194) ext2 (ENSONIG00000006180) ALX4 (ENSONIG00000006176) caprin1a (ENSONIG00000006172) nucb2a (ENSONIG00000006167) PLEKHA7 (ENSONIG00000006159) #10 sox6 (ENSONIG00000006148) ##12 calca (ENSONIG00000006147) #15 CYP2R1 (ENSONIG00000039281) #17 PDE3B (ENSONIG00000006135) #19 copb1 (ENSONIG00000006126) #21 rras2 (ENSONIG00000006123) #22 TUB (ENSONIG00000006117) ENSONIG00000039991 lmo1 (ENSONIG00000032162) TRIM66 (ENSONIG00000006104) dennd2b (ENSONIG00000006097) tmem9b (ENSONIG00000006095) scube2 (ENSONIG00000006087) sinhcafl (ENSONIG00000030336) ##13 DENND5A (ENSONIG00000006080) tmem41b (ENSONIG00000038769) ipo7 (ENSONIG00000006069) SWAP70 (ENSONIG00000006065) SBF2 (ENSONIG00000006046) adma (ENSONIG00000006045) AMPD3 (ENSONIG00000006039) Midas cichlid MODERN SPECIES 540 sox6 (ENSACIG00000000668) ##12 CALCB (ENSACIG00000000603) #15 CYP2R1 (ENSACIG00000000555) #17 PDE3B (ENSACIG00000000500) #19 copb1 (ENSACIG00000000428) #21 rras2 (ENSACIG00000000403) #22 Pomacentridae ANCESTRAL SPECIES 48 ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00940000165144.b ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Bicolor damselfish MODERN SPECIES 906 copb1 (ENSSPAG00000014962) #21 rras2 (ENSSPAG00000015015) #22 TUB (ENSSPAG00000015039) ENSSPAG00000015067 lmo1 (ENSSPAG00000015081) stk33 (ENSSPAG00000015098) rerglb (ENSSPAG00000015126) TRIM66 (ENSSPAG00000015149) Pomacentridae_A ANCESTRAL SPECIES 45 ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000159240 ENSGT00940000165144.b ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b Amphiprion ANCESTRAL SPECIES 62 ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000167685.a ENSGT00940000165144.b ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Orange clownfish MODERN SPECIES CDYL2 (ENSAPEG00000008292) cmc2 (ENSAPEG00000008340) cenpn (ENSAPEG00000008357) ATMIN (ENSAPEG00000008400) ENSAPEG00000008412 gse1b (ENSAPEG00000008461) gins2 (ENSAPEG00000008523) caprin1a (ENSAPEG00000008548) nucb2a (ENSAPEG00000008562) PLEKHA7 (ENSAPEG00000008627) #10 sox6 (ENSAPEG00000008721) ##12 CALCB (ENSAPEG00000008768) #15 CYP2R1 (ENSAPEG00000008784) #17 PDE3B (ENSAPEG00000008800) #19 copb1 (ENSAPEG00000008894) #21 rras2 (ENSAPEG00000008980) #22 TUB (ENSAPEG00000009006) ENSAPEG00000009056 lmo1 (ENSAPEG00000009063) stk33 (ENSAPEG00000009083) rerglb (ENSAPEG00000009130) ENSAPEG00000009169 dennd2b (ENSAPEG00000009180) tmem9b (ENSAPEG00000009207) scube2 (ENSAPEG00000009266) sinhcafl (ENSAPEG00000009601) ##13 DENND5A (ENSAPEG00000009643) tmem41b (ENSAPEG00000009804) ipo7 (ENSAPEG00000009820) SWAP70 (ENSAPEG00000009935) SBF2 (ENSAPEG00000009986) Clown anemonefish MODERN SPECIES 3511 caprin1a (ENSAOCG00000003017) nucb2a (ENSAOCG00000003011) PLEKHA7 (ENSAOCG00000002997) #10 sox6 (ENSAOCG00000002954) ##12 CALCB (ENSAOCG00000002949) #15 ENSAOCG00000002947 CYP2R1 (ENSAOCG00000002944) #17 PDE3B (ENSAOCG00000002938) #19 copb1 (ENSAOCG00000002926) #21 rras2 (ENSAOCG00000002921) #22 hs3st3b1b (ENSAOCG00000002917) cox10 (ENSAOCG00000002916) Spiny chromis MODERN SPECIES 128 caprin1a (ENSAPOG00000004726) nucb2a (ENSAPOG00000004697) PLEKHA7 (ENSAPOG00000004621) #10 sox6 (ENSAPOG00000004363) ##12 CALCB (ENSAPOG00000004327) #15 CYP2R1 (ENSAPOG00000004316) #17 PDE3B (ENSAPOG00000004290) #19 copb1 (ENSAPOG00000004220) #21 rras2 (ENSAPOG00000004154) #22 TUB (ENSAPOG00000004128) RIC3 (ENSAPOG00000004110) lmo1 (ENSAPOG00000004082) stk33 (ENSAPOG00000000095) rerglb (ENSAPOG00000004029) TRIM66 (ENSAPOG00000003993) Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000177879 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Aplocheiloidei ANCESTRAL SPECIES 16 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Mangrove rivulus MODERN SPECIES 5 sdhaf2 (ENSKMAG00000003216) CPSF7 (ENSKMAG00000003250) polr2l (ENSKMAG00000003267) ENSKMAG00000003288 DAGLA (ENSKMAG00000003326) ext2 (ENSKMAG00000003482) ALX4 (ENSKMAG00000003555) caprin1a (ENSKMAG00000003580) nucb2a (ENSKMAG00000003632) PLEKHA7 (ENSKMAG00000003760) #10 sox6 (ENSKMAG00000003927) ##12 CALCB (ENSKMAG00000003961) #15 CYP2R1 (ENSKMAG00000003974) #17 PDE3B (ENSKMAG00000004046) #19 copb1 (ENSKMAG00000004130) #21 rras2 (ENSKMAG00000004205) #22 TUB (ENSKMAG00000004274) RIC3 (ENSKMAG00000004305) lmo1 (ENSKMAG00000004358) stk33 (ENSKMAG00000004387) TRIM66 (ENSKMAG00000004407) dennd2b (ENSKMAG00000004464) tmem9b (ENSKMAG00000004539) scube2 (ENSKMAG00000004576) sinhcafl (ENSKMAG00000004622) ##13 DENND5A (ENSKMAG00000004692) tmem41b (ENSKMAG00000004938) ipo7 (ENSKMAG00000004961) SWAP70 (ENSKMAG00000005041) SBF2 (ENSKMAG00000005143) adma (ENSKMAG00000005367) Turquoise killifish MODERN SPECIES 1616 EXT2 (ENSNFUG00015018984) ALX4 (ENSNFUG00015019004) caprin1a (ENSNFUG00015019090) ENSNFUG00015020313 NUCB2A (ENSNFUG00015020327) PLEKHA7 (ENSNFUG00015020432) #10 ENSNFUG00015020502 sox6 (ENSNFUG00015020516) ##12 ENSNFUG00015020710 CALCA (ENSNFUG00015020712) #15 ENSNFUG00015020716 CYP2R1 (ENSNFUG00015020717) #17 PDE3B (ENSNFUG00015020724) #19 copb1 (ENSNFUG00015020743) #21 ENSNFUG00015020745 RRAS2 (ENSNFUG00015020746) #22 ENSNFUG00015020747 TUB (ENSNFUG00015020748) ENSNFUG00015020752 LMO1 (ENSNFUG00015020757) ENSNFUG00015020765 dennd2b (ENSNFUG00015003344) tmem9b (ENSNFUG00015003535) scube2 (ENSNFUG00015003620) FAM60AL (ENSNFUG00015003882) ##13 DENND5A (ENSNFUG00015003948) TMEM41B (ENSNFUG00015004345) IPO7 (ENSNFUG00015004384) SWAP70 (ENSNFUG00015004558) SBF2 (ENSNFUG00015005164) ADM (ENSNFUG00015008551) Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000177879 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Poeciliinae ANCESTRAL SPECIES 13 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Poecilia ANCESTRAL SPECIES 4 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b NAME_6 ANCESTRAL SPECIES 5 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 1184 CALCB (ENSPLAG00000008795) #15 CYP2R1 (ENSPLAG00000008777) #17 PDE3B (ENSPLAG00000008748) #19 copb1 (ENSPLAG00000008682) #21 rras2 (ENSPLAG00000008614) #22 Sailfin molly MODERN SPECIES 3392 rras2 (ENSPLAG00000019120) #22 Amazon molly MODERN SPECIES 312 CPSF7 (ENSPFOG00000004519) polr2l (ENSPFOG00000004650) ENSPFOG00000020398 DAGLA (ENSPFOG00000004676) ext2 (ENSPFOG00000004783) ALX4 (ENSPFOG00000005046) caprin1a (ENSPFOG00000005152) nucb2a (ENSPFOG00000005435) nucb2a (ENSPFOG00000005656) PLEKHA7 (ENSPFOG00000005826) #10 sox6 (ENSPFOG00000006435) ##12 CALCB (ENSPFOG00000006851) #15 CYP2R1 (ENSPFOG00000006878) #17 PDE3B (ENSPFOG00000006929) #19 copb1 (ENSPFOG00000007235) #21 rras2 (ENSPFOG00000024387) #22 TUB (ENSPFOG00000007528) ENSPFOG00000007878 TUB (ENSPFOG00000007651) lmo1 (ENSPFOG00000007913) stk33 (ENSPFOG00000007939) ENSPFOG00000008009 dennd2b (ENSPFOG00000008130) tmem9b (ENSPFOG00000008360) scube2 (ENSPFOG00000008376) sinhcafl (ENSPFOG00000008798) ##13 DENND5A (ENSPFOG00000008842) tmem41b (ENSPFOG00000009218) ipo7 (ENSPFOG00000009302) SWAP70 (ENSPFOG00000009580) ENSPFOG00000010152 Guppy MODERN SPECIES 455 sdhaf2 (ENSPREG00000022941) CPSF7 (ENSPREG00000022943) polr2l (ENSPREG00000022948) ENSPREG00000022952 DAGLA (ENSPREG00000022964) ext2 (ENSPREG00000022978) ALX4 (ENSPREG00000022983) caprin1a (ENSPREG00000022985) nucb2a (ENSPREG00000022991) PLEKHA7 (ENSPREG00000022998) #10 sox6 (ENSPREG00000023003) ##12 CALCB (ENSPREG00000023008) #15 CYP2R1 (ENSPREG00000023013) #17 PDE3B (ENSPREG00000023019) #19 copb1 (ENSPREG00000023030) #21 rras2 (ENSPREG00000023037) #22 TUB (ENSPREG00000023041) RIC3 (ENSPREG00000023045) lmo1 (ENSPREG00000023049) stk33 (ENSPREG00000023053) TRIM66 (ENSPREG00000023056) dennd2b (ENSPREG00000023064) tmem9b (ENSPREG00000023069) scube2 (ENSPREG00000023072) sinhcafl (ENSPREG00000023079) ##13 DENND5A (ENSPREG00000023083) tmem41b (ENSPREG00000023087) ipo7 (ENSPREG00000023089) SWAP70 (ENSPREG00000023094) SBF2 (ENSPREG00000023097) adma (ENSPREG00000023101) Platyfish MODERN SPECIES 18 DAGLA (ENSXMAG00000007236) ext2 (ENSXMAG00000007194) ALX4 (ENSXMAG00000024055) caprin1a (ENSXMAG00000007148) nucb2a (ENSXMAG00000007119) PLEKHA7 (ENSXMAG00000007097) #10 sox6 (ENSXMAG00000028516) ##12 ENSXMAG00000024176 ENSXMAG00000029285 ENSXMAG00000024195 CALCB (ENSXMAG00000007066) #15 CYP2R1 (ENSXMAG00000007057) #17 ENSXMAG00000022826 PDE3B (ENSXMAG00000007043) #19 copb1 (ENSXMAG00000007010) #21 rras2 (ENSXMAG00000007001) #22 TUB (ENSXMAG00000027543) ENSXMAG00000024909 RIC3 (ENSXMAG00000006965) lmo1 (ENSXMAG00000025568) stk33 (ENSXMAG00000006951) ENSXMAG00000027254 dennd2b (ENSXMAG00000009533) tmem9b (ENSXMAG00000009524) scube2 (ENSXMAG00000009507) sinhcafl (ENSXMAG00000023934) ##13 DENND5A (ENSXMAG00000009460) tmem41b (ENSXMAG00000009444) ipo7 (ENSXMAG00000009410) SWAP70 (ENSXMAG00000009385) SBF2 (ENSXMAG00000009340) NAME_4 ANCESTRAL SPECIES 6 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 ENSGT00940000154380.b Mummichog MODERN SPECIES 406 sdhaf2 (ENSFHEG00000019795) polr2l (ENSFHEG00000019804) ENSFHEG00000019812 ENSFHEG00000019824 DAGLA (ENSFHEG00000000717) ext2 (ENSFHEG00000020091) ALX4 (ENSFHEG00000020118) caprin1a (ENSFHEG00000020227) nucb2a (ENSFHEG00000020276) PLEKHA7 (ENSFHEG00000020347) #10 sox6 (ENSFHEG00000020392) ##12 calca (ENSFHEG00000020398) #15 CYP2R1 (ENSFHEG00000020430) #17 PDE3B (ENSFHEG00000020441) #19 copb1 (ENSFHEG00000020559) #21 rras2 (ENSFHEG00000020569) #22 TUB (ENSFHEG00000020615) gja4 (ENSFHEG00000020622) smim12 (ENSFHEG00000020628) pef1 (ENSFHEG00000020653) gjb9b (ENSFHEG00000020663) Sheepshead minnow MODERN SPECIES 240 pth3r (ENSCVAG00000005352) rundc3ab (ENSCVAG00000005322) ENSCVAG00000000933 ndufa4b (ENSCVAG00000005279) ENSCVAG00000005267 ext2 (ENSCVAG00000005242) ALX4 (ENSCVAG00000005157) caprin1a (ENSCVAG00000005129) nucb2a (ENSCVAG00000005024) PLEKHA7 (ENSCVAG00000005004) #10 sox6 (ENSCVAG00000004943) ##12 ENSCVAG00000004905 #15 CYP2R1 (ENSCVAG00000004875) #17 PDE3B (ENSCVAG00000004812) #19 copb1 (ENSCVAG00000000142) #21 rras2 (ENSCVAG00000004694) #22 TUB (ENSCVAG00000004646) ENSCVAG00000004626 lmo1 (ENSCVAG00000004614) TRIM66 (ENSCVAG00000004596) dennd2b (ENSCVAG00000000856) tmem9b (ENSCVAG00000004546) scube2 (ENSCVAG00000000135) sinhcafl (ENSCVAG00000004354) ##13 Oryzias ANCESTRAL SPECIES 13 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b.u ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00550000075103 ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Oryzias_b ANCESTRAL SPECIES 5 ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b.u ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00550000075103 ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Indian medaka MODERN SPECIES 26 sdhaf2 (ENSOMEG00000020472) polr2l (ENSOMEG00000020485) ENSOMEG00000000539 ENSOMEG00000020549 DAGLA (ENSOMEG00000020704) ext2 (ENSOMEG00000020911) ALX4 (ENSOMEG00000020939) caprin1a (ENSOMEG00000020990) nucb2a (ENSOMEG00000021043) PLEKHA7 (ENSOMEG00000021387) #10 sox6 (ENSOMEG00000021460) ##12 CALCB (ENSOMEG00000021480) #15 CYP2R1 (ENSOMEG00000021495) #17 PDE3B (ENSOMEG00000021580) #19 copb1 (ENSOMEG00000021675) #21 rras2 (ENSOMEG00000021709) #22 TUB (ENSOMEG00000021800) RIC3 (ENSOMEG00000021839) lmo1 (ENSOMEG00000021870) stk33 (ENSOMEG00000021950) TRIM66 (ENSOMEG00000022034) dennd2b (ENSOMEG00000022116) tmem9b (ENSOMEG00000022248) scube2 (ENSOMEG00000022368) sinhcafl (ENSOMEG00000000677) ##13 DENND5A (ENSOMEG00000001410) mrps12 (ENSOMEG00000001427) tmem41b (ENSOMEG00000001436) ipo7 (ENSOMEG00000001444) SWAP70 (ENSOMEG00000001453) SBF2 (ENSOMEG00000001484) Javanese ricefish MODERN SPECIES 17 syt7b (ENSOJAG00000018191) sdhaf2 (ENSOJAG00000018417) CPSF7 (ENSOJAG00000018458) polr2l (ENSOJAG00000018468) DAGLA (ENSOJAG00000018508) ext2 (ENSOJAG00000018872) ALX4 (ENSOJAG00000018986) caprin1a (ENSOJAG00000019166) nucb2a (ENSOJAG00000020534) PLEKHA7 (ENSOJAG00000020553) #10 sox6 (ENSOJAG00000020642) ##12 calca (ENSOJAG00000021048) #15 CYP2R1 (ENSOJAG00000021057) #17 PDE3B (ENSOJAG00000021064) #19 copb1 (ENSOJAG00000021137) #21 rras2 (ENSOJAG00000021162) #22 TUB (ENSOJAG00000021184) RIC3 (ENSOJAG00000021266) lmo1 (ENSOJAG00000021369) stk33 (ENSOJAG00000021395) TRIM66 (ENSOJAG00000003677) dennd2b (ENSOJAG00000004175) tmem9b (ENSOJAG00000006329) scube2 (ENSOJAG00000006535) ENSOJAG00000007527 sinhcafl (ENSOJAG00000007538) ##13 DENND5A (ENSOJAG00000007737) mrps12 (ENSOJAG00000009353) tmem41b (ENSOJAG00000009375) ipo7 (ENSOJAG00000009543) SWAP70 (ENSOJAG00000011577) Oryzias_a ANCESTRAL SPECIES 6 ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050 ENSGT00940000159240 ENSGT00950000182931.B.b.u ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00550000075103 ENSGT00940000156956 ENSGT00940000154666 ENSGT00950000183017.b.a.b ENSGT00940000155385 Chinese medaka MODERN SPECIES 1080 syt7b (ENSOSIG00000008876) ENSOSIG00000008872 polr2l (ENSOSIG00000008871) DAGLA (ENSOSIG00000008866) ext2 (ENSOSIG00000008859) ALX4 (ENSOSIG00000008852) caprin1a (ENSOSIG00000007411) nucb2a (ENSOSIG00000006679) PLEKHA7 (ENSOSIG00000006450) #10 sox6 (ENSOSIG00000001026) ##12 calca (ENSOSIG00000000979) #15 CYP2R1 (ENSOSIG00000000974) #17 PDE3B (ENSOSIG00000000952) #19 copb1 (ENSOSIG00000000939) #21 rras2 (ENSOSIG00000000928) #22 TUB (ENSOSIG00000000903) ENSOSIG00000000896 lmo1 (ENSOSIG00000000880) Japanese Medaka HdrR MODERN SPECIES 17 sdhaf2 (ENSORLG00000006484) CPSF7 (ENSORLG00000006495) polr2l (ENSORLG00000027182) ENSORLG00000025892 DAGLA (ENSORLG00000006508) ext2 (ENSORLG00000006545) ENSORLG00000030115 caprin1a (ENSORLG00000006617) nucb2a (ENSORLG00000006670) PLEKHA7 (ENSORLG00000006696) #10 sox6 (ENSORLG00000006705) ##12 calca (ENSORLG00000029182) #15 CYP2R1 (ENSORLG00000006737) #17 PDE3B (ENSORLG00000006744) #19 copb1 (ENSORLG00000006792) #21 rras2 (ENSORLG00000026261) #22 TUB (ENSORLG00000006838) RIC3 (ENSORLG00000006849) lmo1 (ENSORLG00000006857) stk33 (ENSORLG00000006868) TRIM66 (ENSORLG00000006881) ENSORLG00000026169 dennd2b (ENSORLG00000006916) tmem9b (ENSORLG00000006942) scube2 (ENSORLG00000006978) sinhcafl (ENSORLG00000022601) ##13 DENND5A (ENSORLG00000007031) mrps12 (ENSORLG00000007040) tmem41b (ENSORLG00000007045) ipo7 (ENSORLG00000007093) SWAP70 (ENSORLG00000007129) Cod MODERN SPECIES 5 sdhaf2 (ENSGMOG00000004126) CPSF7 (ENSGMOG00000023837) PDE3B (ENSGMOG00000009081) #19 ENSGMOG00000009073 #17 CALCB (ENSGMOG00000022359) #15 ENSGMOG00000037057 sox6 (ENSGMOG00000009040) ##12 ENSGMOG00000008994 #10 nucb2a (ENSGMOG00000008982) caprin1a (ENSGMOG00000008955) ENSGMOG00000035528 ext2 (ENSGMOG00000008933) ENSGMOG00000008916 ENSGMOG00000032093 copb1 (ENSGMOG00000001285) #21 rras2 (ENSGMOG00000023390) #22 TUB (ENSGMOG00000001319) ENSGMOG00000028422 lmo1 (ENSGMOG00000001353) stk33 (ENSGMOG00000001364) ENSGMOG00000027942 dennd2b (ENSGMOG00000001487) tmem9b (ENSGMOG00000001545) scube2 (ENSGMOG00000001550) sinhcafl (ENSGMOG00000001596) ##13 DENND5A (ENSGMOG00000001607) tmem41b (ENSGMOG00000001661) ipo7 (ENSGMOG00000001681) adma (ENSGMOG00000023910) ENSGMOG00000001854 AMPD3 (ENSGMOG00000001940) Protacanthopterygii ANCESTRAL SPECIES 2 ENSGT00390000007087 ENSGT00940000161192.c ENSGT00940000156620 ENSGT00940000159662.c.a ENSGT00940000153438.a.t ENSGT00390000001927.a.b ENSGT00390000017491.h #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305 #17 ENSGT00940000159336 #19 ENSGT00550000074855.mc #20 ENSGT00390000005270 #21 ENSGT00940000155328 #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b ENSGT00940000159050.e ENSGT00940000159050.f ENSGT00940000167685.a ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a ENSGT00940000153185.a.b ENSGT00390000006485.d ##13 ENSGT00940000153678.a.b ENSGT00940000156956 ENSGT00940000154666 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 70 ENSGT00940000153438.a.t.e ENSGT00390000001927.a.b.l ENSGT00390000017491.h.a.b #8 ENSGT00940000159662.c.a.c.a ENSGT00940000153438.a.t.f ENSGT00390000001927.a.b.k ENSGT00390000017491.h.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A.f.a ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305.n #17 ENSGT00940000158305.m.a #17 ENSGT00940000159336 #19 ENSGT00550000074855.mc.b #20 ENSGT00390000005270.j #21 ENSGT00940000155328.i #22 ENSGT00550000074855.mc.a #20 ENSGT00390000005270.i #21 ENSGT00940000155328.j #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.b.a.a ENSGT00940000159050.f ENSGT00940000167685.a ENSGT01010000227201 ENSGT00940000153908.b.a.b.b.a.b ENSGT00940000159050.e ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a.z Salmoninae_a ANCESTRAL SPECIES 110 ENSGT00390000001927.a.b.l ENSGT00390000017491.h.a.b #8 ENSGT00940000159662.c.a.c.a ENSGT00940000153438.a.t.f ENSGT00390000001927.a.b.k ENSGT00390000017491.h.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00940000156267.ob.a.a.b #15 ENSGT00940000158305.m.b #17 ENSGT00940000156433.A.f.a ##12 ENSGT00940000156267.ob.a.a.a #15 ENSGT00940000158305.n #17 ENSGT00940000159336 #19 ENSGT00550000074855.mc.b #20 ENSGT00390000005270.j #21 ENSGT00940000155328.i #22 ENSGT00940000158372.e.b ENSGT00980000201207 ENSGT00940000158372.f ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.b.a.b.b ENSGT00940000175367 ENSGT00950000182931.B.b.w ENSGT00390000000819.a.z.a ENSGT00940000153185.a.b ENSGT00390000006485.d.g.a ##13 ENSGT00390000006485.d.g.b ##13 ENSGT00940000153678.a.b.h ENSGT00940000156956.q ENSGT00940000154666.o.a ENSGT00940000157584.a.b.a Oncorhynchus ANCESTRAL SPECIES ENSGT00730000110905.a.v ENSGT00390000007087.fc ENSGT00940000161192.c.d ENSGT00940000156620.a ENSGT00940000159662.c.a.d.a.a.a ENSGT00940000153438.a.t.f ENSGT00390000001927.a.b.l ENSGT00390000017491.h.a.b #8 ENSGT00940000155817.a.a.g.a #10 ENSGT00940000156433.A.f.a.c.b ##12 ENSGT00940000156267.ob.a.a.b.a #15 ENSGT00940000158305.m.b #17 ENSGT00940000159336.e #19 ENSGT00550000074855.mc.b #20 ENSGT00390000005270.j #21 ENSGT00940000155328.i #22 ENSGT00940000158372.e.b ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.b.a.a ENSGT00940000159050.f ENSGT00940000167685.a.d ENSGT00940000175367 ENSGT00950000182931.B.b.w ENSGT00390000000819.a.z.a ENSGT00940000153185.a.b.m ENSGT00390000006485.d.g.b ##13 ENSGT00940000153678.a.b.h ENSGT00940000156956.q ENSGT00940000154666.o.b.a ENSGT00940000157584.a.b.a Rainbow trout MODERN SPECIES 27 ext2 (ENSOMYG00000025860) ENSOMYG00000026004 ENSOMYG00000065161 caprin1a (ENSOMYG00000026330) nucb2a (ENSOMYG00000028031) rps13 (ENSOMYG00000028093) #8 ENSOMYG00000052398 PLEKHA7 (ENSOMYG00000028225) #10 sox6 (ENSOMYG00000028350) ##12 ENSOMYG00000068880 calca (ENSOMYG00000028443) #15 CYP2R1 (ENSOMYG00000038301) #17 PDE3B (ENSOMYG00000028505) #19 PSMA1 (ENSOMYG00000028568) #20 copb1 (ENSOMYG00000028621) #21 rras2 (ENSOMYG00000028686) #22 TUB (ENSOMYG00000028731) ENSOMYG00000028764 lmo1 (ENSOMYG00000028836) stk33 (ENSOMYG00000028861) rerglb (ENSOMYG00000028877) ENSOMYG00000028931 dennd2b (ENSOMYG00000029348) tmem9b (ENSOMYG00000029621) scube2 (ENSOMYG00000030364) sinhcafl (ENSOMYG00000032569) ##13 DENND5A (ENSOMYG00000032762) tmem41b (ENSOMYG00000033690) ipo7 (ENSOMYG00000033749) ZNF143 (ENSOMYG00000034171) WEE1 (ENSOMYG00000034214) Oncorhynchus_a ANCESTRAL SPECIES ENSGT00730000110905.a.v ENSGT00390000007087.fc ENSGT00940000161192.c.d ENSGT00940000156620.a ENSGT00940000159662.c.a.d.a.a.a ENSGT00940000153438.a.t.f ENSGT00390000001927.a.b.k.d ENSGT00390000017491.h.a.b #8 ENSGT00940000155817.a.a.g.a #10 ENSGT00940000156433.A.f.a.c.b ##12 ENSGT00940000156267.ob.a.a.b.a #15 ENSGT00940000158305.m.b #17 ENSGT00940000159336.e #19 ENSGT00550000074855.mc.b #20 ENSGT00390000005270.j #21 ENSGT00940000155328.i #22 ENSGT00940000158372.e.b ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.b.a.b.a ENSGT00940000159050.f ENSGT00940000167685.a.d ENSGT00950000182931.B.b.w ENSGT00390000000819.a.z.a ENSGT00940000153185.a.b.m ENSGT00390000006485.d.g.b ##13 ENSGT00940000153678.a.b.h ENSGT00940000156956.q ENSGT00940000154666.o.b.a ENSGT00940000157584.a.b.a ENSGT00940000157939.c.a Chinook salmon MODERN SPECIES 28 spi1b (ENSOTSG00005008162) mybpc3 (ENSOTSG00005008163) lgr4 (ENSOTSG00005008165) mettl15 (ENSOTSG00005008166) ENSOTSG00005008169 bdnf (ENSOTSG00005008179) lin7c (ENSOTSG00005008180) rplp2l (ENSOTSG00005008227) ENSOTSG00005008230 saa (ENSOTSG00005008232) ENSOTSG00005008235 ENSOTSG00005008237 TMEM266 (ENSOTSG00005008240) ETFA (ENSOTSG00005008245) ISL2 (ENSOTSG00005008260) rras2 (ENSOTSG00005008261) #22 TUB (ENSOTSG00005008266) ENSOTSG00005008285 ENSOTSG00005008286 lmo1 (ENSOTSG00005008289) ipo7 (ENSOTSG00005008302) ZNF143 (ENSOTSG00005008898) WEE1 (ENSOTSG00005008918) SWAP70 (ENSOTSG00005009116) ENSOTSG00005009118 cyp1a (ENSOTSG00005009121) edc3 (ENSOTSG00005009124) CSK (ENSOTSG00005009131) ENSOTSG00005009432 ENSOTSG00005009435 ulk3 (ENSOTSG00005009437) Coho salmon MODERN SPECIES 22 polr2l (ENSOKIG00005012770) DAGLA (ENSOKIG00005012792) ext2 (ENSOKIG00005012905) nucb2a (ENSOKIG00005012961) ENSOKIG00005013129 caprin1a (ENSOKIG00005013151) rps13 (ENSOKIG00005013416) #8 PLEKHA7 (ENSOKIG00005013473) #10 sox6 (ENSOKIG00005013574) ##12 ENSOKIG00005014105 #15 CYP2R1 (ENSOKIG00005014134) #17 ENSOKIG00005014147 PDE3B (ENSOKIG00005014164) #19 PSMA1 (ENSOKIG00005014197) #20 copb1 (ENSOKIG00005014217) #21 rras2 (ENSOKIG00005014236) #22 TUB (ENSOKIG00005014260) ENSOKIG00005014300 lmo1 (ENSOKIG00005014306) ENSOKIG00005014365 stk33 (ENSOKIG00005014371) rerglb (ENSOKIG00005014417) ENSOKIG00005014422 dennd2b (ENSOKIG00005014464) tmem9b (ENSOKIG00005014879) scube2 (ENSOKIG00005014943) sinhcafl (ENSOKIG00005016125) ##13 DENND5A (ENSOKIG00005016214) ENSOKIG00005016851 tmem41b (ENSOKIG00005016855) ipo7 (ENSOKIG00005017018) Salmo ANCESTRAL SPECIES 30 ENSGT00940000161192.c.a ENSGT00940000156620.c ENSGT00940000159662.c.a.c.a ENSGT00940000153438.a.t.f ENSGT00390000001927.a.b.k ENSGT00390000017491.h.a.b #8 ENSGT00390000017491.g.a #8 ENSGT00940000155817.a.a.e #10 ENSGT00940000156433.A.f.a.a.b ##12 ENSGT00940000156433.A.f.a.b ##12 ENSGT00940000156267.ob.a.a.b #15 ENSGT00940000158305.n.a #17 ENSGT00940000159336.g #19 ENSGT00550000074855.mc.b.a #20 ENSGT00390000005270.j #21 ENSGT00940000155328.i #22 ENSGT00940000158372.f ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.b.a.a ENSGT00940000159050.f ENSGT00940000167685.a.d ENSGT00940000153908.b.a.b.b.a.b.b ENSGT00940000159050.e.a ENSGT00940000159240.j ENSGT00950000182931.B.b.w ENSGT00390000000819.a.z.a ENSGT00940000153185.a.b.k ENSGT00390000006485.d.g.a ##13 ENSGT00390000006485.d.g.b ##13 ENSGT00940000153678.a.b.h ENSGT00940000156956.q River trout MODERN SPECIES 21 DAGLA (ENSSTUG00000024913) ext2 (ENSSTUG00000024763) ALX4 (ENSSTUG00000024737) caprin1a (ENSSTUG00000022190) nucb2a (ENSSTUG00000022038) rps13 (ENSSTUG00000021996) #8 ENSSTUG00000021991 PLEKHA7 (ENSSTUG00000021977) #10 ENSSTUG00000021969 sox6 (ENSSTUG00000021923) ##12 calca (ENSSTUG00000021879) #15 CYP2R1 (ENSSTUG00000021866) #17 PDE3B (ENSSTUG00000021726) #19 PSMA1 (ENSSTUG00000021654) #20 copb1 (ENSSTUG00000021603) #21 rras2 (ENSSTUG00000021582) #22 TUB (ENSSTUG00000021514) RIC3 (ENSSTUG00000021499) lmo1 (ENSSTUG00000021469) stk33 (ENSSTUG00000021438) rerglb (ENSSTUG00000021433) TRIM66 (ENSSTUG00000021424) dennd2b (ENSSTUG00000019526) tmem9b (ENSSTUG00000019411) scube2 (ENSSTUG00000017198) sinhcafl (ENSSTUG00000017061) ##13 DENND5A (ENSSTUG00000016086) tmem41b (ENSSTUG00000016024) ipo7 (ENSSTUG00000014477) ZNF143 (ENSSTUG00000014417) WEE1 (ENSSTUG00000014328) Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 18 sdhaf2 (ENSSSAG00000056131) cpsf7 (ENSSSAG00000056129) ENSSSAG00000091113 ext2 (ENSSSAG00000054855) ENSSSAG00000120847 caprin1a (ENSSSAG00000050441) nucb2a (ENSSSAG00000050236) ENSSSAG00000050190 #8 PLEKHA7 (ENSSSAG00000056249) #10 sox6 (ENSSSAG00000056464) ##12 calc1 (ENSSSAG00000098633) #15 CYP2R1 (ENSSSAG00000068447) #17 PDE3B (ENSSSAG00000068456) #19 PSMA1 (ENSSSAG00000050151) #20 copb1 (ENSSSAG00000068484) #21 rras2 (ENSSSAG00000068487) #22 TUB (ENSSSAG00000068493) RIC3 (ENSSSAG00000068499) RBTN1 (ENSSSAG00000068503) stk33 (ENSSSAG00000083785) TRIM66 (ENSSSAG00000068524) ENSSSAG00000103118 dennd2b (ENSSSAG00000068591) tmem9b (ENSSSAG00000071020) scube2 (ENSSSAG00000071102) sinhcafl (ENSSSAG00000092298) ##13 DENND5A (ENSSSAG00000063921) ipo7 (ENSSSAG00000071864) ZNF143 (ENSSSAG00000103486) WEE1 (ENSSSAG00000071931) SWAP70 (ENSSSAG00000118232) Atlantic salmon MODERN SPECIES 2 CPSF7 (ENSSSAG00000056029) polr2l (ENSSSAG00000056026) ENSSSAG00000054937 ext2 (ENSSSAG00000054896) ENSSSAG00000054892 caprin1a (ENSSSAG00000051658) nucb2a (ENSSSAG00000109167) rps13 (ENSSSAG00000051583) #8 PLEKHA7 (ENSSSAG00000056290) #10 sox6 (ENSSSAG00000111310) ##12 ENSSSAG00000056329 #15 CYP2R1 (ENSSSAG00000056320) #17 PDE3B (ENSSSAG00000056292) #19 PSMA1 (ENSSSAG00000068478) #20 copb (ENSSSAG00000056136) #21 rras2 (ENSSSAG00000115545) #22 ENSSSAG00000056406 ENSSSAG00000056395 rbtn1 (ENSSSAG00000056384) stk33 (ENSSSAG00000068513) rerglb (ENSSSAG00000121053) ENSSSAG00000056421 st5 (ENSSSAG00000056445) tmm9b (ENSSSAG00000056717) scube2 (ENSSSAG00000056872) sinhcafl (ENSSSAG00000115933) ##13 DENND5A (ENSSSAG00000071381) tmem41b (ENSSSAG00000084251) ipo7 (ENSSSAG00000069543) ZNF143 (ENSSSAG00000069646) WEE1 (ENSSSAG00000069654) Huchen MODERN SPECIES 8211 rras2 (ENSHHUG00000003806) #22 Salmoninae ANCESTRAL SPECIES 70 ENSGT00940000159662.c.a.c.a ENSGT00940000153438.a.t.f ENSGT00390000001927.a.b.k ENSGT00390000017491.h.a.a #8 ENSGT00940000155817.a.a #10 ENSGT00940000156433.A.f.a ##12 ENSGT00940000156267.ob.a.a #15 ENSGT00940000158305.n #17 ENSGT00940000158305.m.a #17 ENSGT00940000159336 #19 ENSGT00550000074855.mc.b #20 ENSGT00390000005270.j #21 ENSGT00940000155328.i #22 ENSGT00550000074855.mc.a #20 ENSGT00390000005270.i #21 ENSGT00940000155328.j #22 ENSGT00940000158372 ENSGT00980000201207 ENSGT00440000034107.a.e ENSGT00940000153908.b.a.b.b.a.a ENSGT00940000159050.f ENSGT00940000167685.a ENSGT01010000227201 ENSGT00940000153908.b.a.b.b.a.b ENSGT00940000159050.e ENSGT00940000159240 ENSGT00950000182931.B.b ENSGT00390000000819.a.z ENSGT00940000153185.a.b ENSGT00390000006485.d.g.a ##13 ENSGT00390000006485.d.g.b ##13 Huchen MODERN SPECIES 1002 sox6 (ENSHHUG00000047546) ##12 ENSHHUG00000047552 #15 CYP2R1 (ENSHHUG00000047569) #17 PDE3B (ENSHHUG00000047573) #19 PSMA1 (ENSHHUG00000047588) #20 copb1 (ENSHHUG00000047595) #21 rras2 (ENSHHUG00000047621) #22 Salmoninae_a ANCESTRAL SPECIES 108 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305.m.a #17 ENSGT00550000074855.mc.a #20 ENSGT00390000005270.i #21 ENSGT00940000155328.j #22 ENSGT00940000158372.e.a ENSGT00940000153908.b.a.b.b.a.a ENSGT00940000159050.f ENSGT00940000167685.a.d ENSGT01010000227201 ENSGT00940000153908.b.a.b.b.a.b.a ENSGT00940000159050.e.a ENSGT00940000153908.b.a.b.b.b ENSGT00940000159050.e.b ENSGT00940000167685.a.c ENSGT00940000159240 ENSGT00950000182931.B.b.x ENSGT00390000000819.a.`b ENSGT00390000006485.d.h ##13 ENSGT00940000153678.a.b.g Oncorhynchus ANCESTRAL SPECIES 32 ENSGT00390000007087.gc ENSGT00940000161192.c.c ENSGT00940000156620.b ENSGT00940000159662.c.a.d.a.b ENSGT00940000153438.a.t.e ENSGT00390000001927.a.b.k ENSGT00390000017491.h.a.a #8 ENSGT00940000155817.a.a.g.b #10 ENSGT00940000156433.A.f.a.c.a ##12 ENSGT00940000156267.ob.a.a.b.b #15 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305.m.a #17 ENSGT00940000159336.f #19 ENSGT00550000074855.mc.a #20 ENSGT00390000005270.i #21 ENSGT00940000155328.j #22 ENSGT00940000158372.e.a ENSGT01010000227201 ENSGT00940000153908.b.a.b.b.b ENSGT00940000159050.e.b ENSGT00940000167685.a.c ENSGT00940000159240 ENSGT00950000182931.B.b.x ENSGT00390000000819.a.`b ENSGT00940000153185.a.b.n ENSGT00390000006485.d.g.a ##13 ENSGT00940000153678.a.b.g ENSGT00940000156956.r ENSGT00940000154666.o.b.b ENSGT00940000157584.a.b.b ENSGT00940000157939.c.b Rainbow trout MODERN SPECIES 18 polr2l (ENSOMYG00000036903) ENSOMYG00000036946 ext2 (ENSOMYG00000037069) ENSOMYG00000037125 ENSOMYG00000060518 caprin1a (ENSOMYG00000037234) nucb2a (ENSOMYG00000037688) rps13 (ENSOMYG00000038163) #8 PLEKHA7 (ENSOMYG00000038228) #10 sox6 (ENSOMYG00000038258) ##12 calca (ENSOMYG00000038284) #15 CYP2R1 (ENSOMYG00000028475) #17 PDE3B (ENSOMYG00000038397) #19 PSMA1 (ENSOMYG00000038560) #20 copb1 (ENSOMYG00000038579) #21 rras2 (ENSOMYG00000038598) #22 ENSOMYG00000053181 ENSOMYG00000038645 ENSOMYG00000061711 ENSOMYG00000058418 lmo1 (ENSOMYG00000038749) stk33 (ENSOMYG00000038911) rerglb (ENSOMYG00000067105) ENSOMYG00000038958 dennd2b (ENSOMYG00000039160) tmem9b (ENSOMYG00000039785) scube2 (ENSOMYG00000039877) sinhcafl (ENSOMYG00000039931) ##13 DENND5A (ENSOMYG00000040333) tmem41b (ENSOMYG00000041295) ipo7 (ENSOMYG00000041325) Oncorhynchus_a ANCESTRAL SPECIES 28 ENSGT00390000007087.gc ENSGT00940000161192.c.c ENSGT00940000156620.b ENSGT00940000159662.c.a.d.a.b ENSGT00940000153438.a.t.e ENSGT00390000001927.a.b.k.c ENSGT00390000017491.g.a #8 ENSGT00390000017491.h.a.a #8 ENSGT00940000155817.a.a.g.b #10 ENSGT00940000156433.A.f.a.c.a ##12 ENSGT00940000156267.ob.b.b #15 ENSGT00940000158305.m.a #17 ENSGT00940000159336.f #19 ENSGT00550000074855.mc.a #20 ENSGT00390000005270.i #21 ENSGT00940000155328.j #22 ENSGT00940000158372.e.a ENSGT00940000153908.b.a.b.b.a.a ENSGT01010000227201 ENSGT00940000153908.b.a.b.b.b ENSGT00940000159050.e.b ENSGT00940000167685.a.c ENSGT00940000159240 ENSGT00950000182931.B.b.x ENSGT00390000000819.a.`b ENSGT00940000153185.a.b.n ENSGT00390000006485.d.g.a ##13 ENSGT00940000153678.a.b.g ENSGT00940000156956.r ENSGT00940000154666.o.b.b ENSGT00940000157584.a.b.b Chinook salmon MODERN SPECIES 3 ENSOTSG00005006460 SWAP70 (ENSOTSG00005006431) WEE1 (ENSOTSG00005006403) ZNF143 (ENSOTSG00005006397) ipo7 (ENSOTSG00005006195) tmem41b (ENSOTSG00005006189) DENND5A (ENSOTSG00005005463) sinhcafl (ENSOTSG00005005456) ##13 ENSOTSG00005005452 tmem9b (ENSOTSG00005005446) ENSOTSG00005005444 dennd2b (ENSOTSG00005002445) ENSOTSG00005002371 rerglb (ENSOTSG00005002365) ENSOTSG00005002361 rras2 (ENSOTSG00005002356) #22 TUB (ENSOTSG00005002339) lmo1 (ENSOTSG00005002215) ENSOTSG00005002209 copb1 (ENSOTSG00005002204) #21 PSMA1 (ENSOTSG00005002178) #20 PDE3B (ENSOTSG00005001674) #19 CYP2R1 (ENSOTSG00005001662) #17 CALCB (ENSOTSG00005001658) #15 ENSOTSG00005001655 sox6 (ENSOTSG00005001651) ##12 ENSOTSG00005001645 ext2 (ENSOTSG00005001642) DAGLA (ENSOTSG00005001617) polr2l (ENSOTSG00005001609) CPSF7 (ENSOTSG00005001582) Coho salmon MODERN SPECIES 28 DAGLA (ENSOKIG00005002001) ext2 (ENSOKIG00005002273) ALX4 (ENSOKIG00005002326) caprin1a (ENSOKIG00005002551) nucb2a (ENSOKIG00005003676) ENSOKIG00005003775 rps13 (ENSOKIG00005003780) #8 PLEKHA7 (ENSOKIG00005003818) #10 sox6 (ENSOKIG00005003934) ##12 CALCB (ENSOKIG00005004812) #15 CYP2R1 (ENSOKIG00005004833) #17 PDE3B (ENSOKIG00005004875) #19 PSMA1 (ENSOKIG00005005059) #20 ENSOKIG00005005085 copb1 (ENSOKIG00005005099) #21 rras2 (ENSOKIG00005005133) #22 TUB (ENSOKIG00005005183) ENSOKIG00005005275 lmo1 (ENSOKIG00005005294) stk33 (ENSOKIG00005005342) rerglb (ENSOKIG00005005349) ENSOKIG00005005359 dennd2b (ENSOKIG00005005497) tmem9b (ENSOKIG00005007601) scube2 (ENSOKIG00005007683) sinhcafl (ENSOKIG00005008686) ##13 DENND5A (ENSOKIG00005008859) tmem41b (ENSOKIG00005011069) ipo7 (ENSOKIG00005011229) ZNF143 (ENSOKIG00005013440) WEE1 (ENSOKIG00005013539) Salmo ANCESTRAL SPECIES 27 ENSGT00730000110905.a.u ENSGT00390000007087.gc ENSGT00940000161192.c.b ENSGT00940000156620.d ENSGT00940000159662.c.a.c.b ENSGT00940000153438.a.t.e ENSGT00390000001927.a.b.l ENSGT00390000017491.h.a.a #8 ENSGT00940000155817.a.a.f #10 ENSGT00940000156433.A.f.a.a.a ##12 ENSGT00940000156267.ob.a.a.a #15 ENSGT00940000158305.n.b #17 ENSGT00940000159336.h #19 ENSGT00550000074855.mc.b.b #20 ENSGT00390000005270.i #21 ENSGT00940000155328.j #22 ENSGT00940000158372.e.a ENSGT01010000227201 ENSGT00940000153908.b.a.b.b.a.b.a ENSGT00940000159050.e.b ENSGT00940000167685.a.c ENSGT00940000159240.i ENSGT00950000182931.B.b.x ENSGT00390000000819.a.z.b ENSGT00940000153185.a.b.l ENSGT00390000006485.d.h ##13 ENSGT00940000153678.a.b.g ENSGT00940000156956.r ENSGT00940000154666.o.b ENSGT00940000157584.a.b.b ENSGT00940000157939.c.b River trout MODERN SPECIES 3 CPSF7 (ENSSTUG00000030313) polr2l (ENSSTUG00000018332) DAGLA (ENSSTUG00000018349) ext2 (ENSSTUG00000018467) ALX4 (ENSSTUG00000018600) caprin1a (ENSSTUG00000018642) nucb2a (ENSSTUG00000019256) rps13 (ENSSTUG00000019449) #8 PLEKHA7 (ENSSTUG00000019498) #10 sox6 (ENSSTUG00000019720) ##12 calca (ENSSTUG00000021547) #15 CYP2R1 (ENSSTUG00000021581) #17 PDE3B (ENSSTUG00000021598) #19 PSMA1 (ENSSTUG00000021827) #20 copb1 (ENSSTUG00000021849) #21 rras2 (ENSSTUG00000021894) #22 TUB (ENSSTUG00000021914) ENSSTUG00000021963 lmo1 (ENSSTUG00000021981) stk33 (ENSSTUG00000022091) rerglb (ENSSTUG00000022098) ENSSTUG00000022116 dennd2b (ENSSTUG00000022187) tmem9b (ENSSTUG00000022621) scube2 (ENSSTUG00000022650) sinhcafl (ENSSTUG00000023080) ##13 DENND5A (ENSSTUG00000023112) tmem41b (ENSSTUG00000023461) ipo7 (ENSSTUG00000023541) znf143a (ENSSTUG00000025469) WEE1 (ENSSTUG00000025529) Northern pike MODERN SPECIES 1 sdhaf2 (ENSELUG00000009646) polr2l (ENSELUG00000009612) ENSELUG00000009626 DAGLA (ENSELUG00000009546) ext2 (ENSELUG00000009497) ALX4 (ENSELUG00000009456) caprin1a (ENSELUG00000009443) nucb2a (ENSELUG00000009406) rps13 (ENSELUG00000028260) #8 PLEKHA7 (ENSELUG00000009191) #10 sox6 (ENSELUG00000008821) ##12 calca (ENSELUG00000008731) #15 CYP2R1 (ENSELUG00000008713) #17 PDE3B (ENSELUG00000008698) #19 copb1 (ENSELUG00000008654) #21 rras2 (ENSELUG00000029973) #22 TUB (ENSELUG00000008558) ENSELUG00000008518 ENSELUG00000025321 lmo1 (ENSELUG00000008493) stk33 (ENSELUG00000008457) rerglb (ENSELUG00000008431) TRIM66 (ENSELUG00000008419) ENSELUG00000008307 dennd2b (ENSELUG00000008374) tmem9b (ENSELUG00000008269) scube2 (ENSELUG00000008233) sinhcafl (ENSELUG00000008175) ##13 DENND5A (ENSELUG00000008118) ENSELUG00000007949 tmem41b (ENSELUG00000007934) Elephant shark MODERN SPECIES 1493 si:dkey-10o6.2 (ENSCMIG00000013256) NUCB2 (ENSCMIG00000013293) PIK3C2A (ENSCMIG00000013542) rps13 (ENSCMIG00000013977) #8 ENSCMIG00000013988 PLEKHA7 (ENSCMIG00000014015) #10 ENSCMIG00000014060 #11 SOX6 (ENSCMIG00000014156) #12 ENSCMIG00000014426 INSC (ENSCMIG00000014431) #14 calca (ENSCMIG00000014433) #15 CYP2R1 (ENSCMIG00000014438) #17 PDE3B (ENSCMIG00000014449) #19 psma1 (ENSCMIG00000014469) #20 copb1 (ENSCMIG00000014496) #21 rras2 (ENSCMIG00000014508) #22 TUB (ENSCMIG00000014521) ENSCMIG00000014533 lmo1 (ENSCMIG00000014539) stk33 (ENSCMIG00000014572) rerglb (ENSCMIG00000014588) ENSCMIG00000014590 rpl27a (ENSCMIG00000014594) dennd2b (ENSCMIG00000014626) ENSCMIG00000014745 ENSCMIG00000014747 ENSCMIG00000014749 tmem9b (ENSCMIG00000014752) NRIP3 (ENSCMIG00000014754) scube2 (ENSCMIG00000014797) ENSCMIG00000014841 ##13 Cyclostomata ANCESTRAL SPECIES 516 ENSGT00940000155328 #22 ENSGT00390000005270 #21 Hagfish MODERN SPECIES 960 ENSEBUG00000000513 VKORC1 (ENSEBUG00000002817) ENSEBUG00000015426 ENSEBUG00000016682 ENSEBUG00000010473 CHDH (ENSEBUG00000014498) ENSEBUG00000004829 KDM5A (ENSEBUG00000008683) ENSEBUG00000007798 ENSEBUG00000002491 ENSEBUG00000015967 ENSEBUG00000011272 ENSEBUG00000005231 ENSEBUG00000017044 ENSEBUG00000007795 rras2 (ENSEBUG00000011510) #22 copb1 (ENSEBUG00000010985) #21 ENSEBUG00000011627 ENSEBUG00000005271 Lamprey MODERN SPECIES 6101 cpsf6 (ENSPMAG00000000657) BEST2 (ENSPMAG00000000653) rras2 (ENSPMAG00000000650) #22 copb1 (ENSPMAG00000000618) #21 BEST1 (ENSPMAG00000000611) rab3ip (ENSPMAG00000000607) ENSPMAG00000000605 ENSPMAG00000000603 efhc1 (ENSPMAG00000000596) prkcbp1l (ENSPMAG00000000561)