Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000156060 #22
Gnathostomata	ANCESTRAL SPECIES	371																ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27
Euteleostomi	ANCESTRAL SPECIES	342															ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29
Sarcopterygii	ANCESTRAL SPECIES	237										ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29
Tetrapoda	ANCESTRAL SPECIES	14	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000018596.A.a.a	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00660000097455	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00950000182994.B.a.a.b
Amniota	ANCESTRAL SPECIES	22	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000018596.A.a.a	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31
Mammalia	ANCESTRAL SPECIES	18	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000018596.A.a.a	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Theria	ANCESTRAL SPECIES	39	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Eutheria	ANCESTRAL SPECIES	14	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Primates	ANCESTRAL SPECIES	1	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000008429 #10	ENSGT00390000001505.b #11	ENSGT00910000147297	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Platyrrhini	ANCESTRAL SPECIES	18	ENSGT00390000008429 #10	ENSGT00390000001505.b #11	ENSGT00910000147297	ENSGT00390000001505.a.b ##11	ENSGT00390000001505.a.a ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.f #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972.e #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836.h ##34	ENSGT00940000154836.g.b ##34
Cebidae	ANCESTRAL SPECIES	14	ENSGT00940000153783.b.b.c.b.d.a #8	ENSGT00390000008429 #10	ENSGT00390000001505.b #11	ENSGT00910000147297	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.f.b ##15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972.e #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836.h ##34	ENSGT00940000154836.g.b ##34
Marmoset	MODERN SPECIES	6	RNF123 (ENSCJAG00000004025) #7	ENSCJAG00000065044 #8	BSN (ENSCJAG00000004003) #9	DAG1 (ENSCJAG00000065054) #10	NICN1 (ENSCJAG00000003992) #11	AMT (ENSCJAG00000003962) #12	TCTA (ENSCJAG00000070394) #13	ENSCJAG00000013657 #14	Gpx-1 (ENSCJAG00000070831) #15	USP4 (ENSCJAG00000003788) #16	C3orf62 (ENSCJAG00000003785) #17	IHO1 (ENSCJAG00000003765) #18	C3orf84 (ENSCJAG00000038262) #19	KLHDC8B (ENSCJAG00000003745) #20	CCDC71 (ENSCJAG00000003741) #21	LAMB2 (ENSCJAG00000003674) #22	USP19 (ENSCJAG00000003571) #23	QARS1 (ENSCJAG00000003457) #24	QRICH1 (ENSCJAG00000003440) #25	IMPDH2 (ENSCJAG00000003400) #26	NDUFAF3 (ENSCJAG00000003387) #27	DALRD3 (ENSCJAG00000003370) #28	WDR6 (ENSCJAG00000003354) #29	P4HTM (ENSCJAG00000003342) #30	ARIH2 (ENSCJAG00000003305) #31	ENSCJAG00000018377 #32	SLC25A20 (ENSCJAG00000003285) #33	PRKAR2A (ENSCJAG00000003255) #34	IP6K2 (ENSCJAG00000003247) #35	NCKIPSD (ENSCJAG00000003195) #36	CELSR3 (ENSCJAG00000003177) #37
Cebidae_a	ANCESTRAL SPECIES	24	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00940000153783.b.b.c.b.d.a #8	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.f.b ##15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972.e #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836.h ##34	ENSGT00940000154836.g.b ##34
Capuchin	MODERN SPECIES		ENSCCAG00000031188 #8	DAG1 (ENSCCAG00000033794) #10	ENSCCAG00000037470	ENSCCAG00000027946 ##11	AMT (ENSCCAG00000030285) #12	ENSCCAG00000037011	TCTA (ENSCCAG00000020886) #13	ENSCCAG00000029968	ENSCCAG00000035444 ##15	USP4 (ENSCCAG00000030853) #16	C3orf62 (ENSCCAG00000025866) #17	IHO1 (ENSCCAG00000030209) #18	C3orf84 (ENSCCAG00000036643) #19	KLHDC8B (ENSCCAG00000028139) #20	CCDC71 (ENSCCAG00000027094) #21	LAMB2 (ENSCCAG00000035337) #22	USP19 (ENSCCAG00000035273) #23	ENSCCAG00000037772 #24	QRICH1 (ENSCCAG00000037655) #25	IMPDH2 (ENSCCAG00000037618) #26	ENSCCAG00000025458	NDUFAF3 (ENSCCAG00000030039) #27	DALRD3 (ENSCCAG00000033230) #28	WDR6 (ENSCCAG00000023576) #29	P4HTM (ENSCCAG00000025551) #30	ENSCCAG00000027394 #31	ENSCCAG00000023903	SLC25A20 (ENSCCAG00000022247) #33	ENSCCAG00000019997	ENSCCAG00000033868 ##34	IP6K2 (ENSCCAG00000030328) #35
Bolivian squirrel monkey	MODERN SPECIES	127	BSN (ENSSBOG00000027936) #9	ENSSBOG00000028754 ##8	DAG1 (ENSSBOG00000033298) #10	ENSSBOG00000033393	NICN1 (ENSSBOG00000034672) ##11	ENSSBOG00000027333 #12	TCTA (ENSSBOG00000027277) #13	RHOA (ENSSBOG00000035785) #14	GPX1 (ENSSBOG00000027004) ##15	USP4 (ENSSBOG00000030849) #16	C3orf62 (ENSSBOG00000018327) #17	IHO1 (ENSSBOG00000021171) #18	C3orf84 (ENSSBOG00000030757) #19	KLHDC8B (ENSSBOG00000028793) #20	CCDC71 (ENSSBOG00000017842) #21	LAMB2 (ENSSBOG00000022847) #22	USP19 (ENSSBOG00000026675) #23	ENSSBOG00000025786 #24	QRICH1 (ENSSBOG00000019070) #25	IMPDH2 (ENSSBOG00000033937) #26	ENSSBOG00000016233	NDUFAF3 (ENSSBOG00000020650) #27	DALRD3 (ENSSBOG00000019867) #28	WDR6 (ENSSBOG00000033806) #29	P4HTM (ENSSBOG00000031541) #30	ENSSBOG00000017416	ARIH2 (ENSSBOG00000026411) #31	ENSSBOG00000014684	SLC25A20 (ENSSBOG00000033387) #33	ENSSBOG00000028841 ##34	ENSSBOG00000034262
Mas night monkey	MODERN SPECIES	1216	ENSANAG00000022804 ##8	BSN (ENSANAG00000037586) #9	ENSANAG00000035024	DAG1 (ENSANAG00000026927) #10	ENSANAG00000031541	ENSANAG00000030342 ##11	AMT (ENSANAG00000027123) #12	TCTA (ENSANAG00000031226) #13	ENSANAG00000035201 #14	USP4 (ENSANAG00000027506) #16	C3orf62 (ENSANAG00000033847) #17	IHO1 (ENSANAG00000036680) #18	C3orf84 (ENSANAG00000023302) #19	KLHDC8B (ENSANAG00000026478) #20	CCDC71 (ENSANAG00000005027) #21	LAMB2 (ENSANAG00000020048) #22	USP19 (ENSANAG00000037255) #23	ENSANAG00000031868 #24	QRICH1 (ENSANAG00000037747) #25	ENSANAG00000019030	IMPDH2 (ENSANAG00000025168) #26	NDUFAF3 (ENSANAG00000022893) #27	DALRD3 (ENSANAG00000030773) #28	WDR6 (ENSANAG00000031798) #29	P4HTM (ENSANAG00000029556) #30	ARIH2 (ENSANAG00000037602) #31	ENSANAG00000026659	SLC25A20 (ENSANAG00000031990) #33	ENSANAG00000035935 ##34	IP6K2 (ENSANAG00000027314) #35	NCKIPSD (ENSANAG00000021174) #36
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000164003	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.b #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.b #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.b.a.a #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.b.a.a #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Pan	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00980000199418	ENSGT00950000182945.b.b #14	ENSGT00940000156150.b.a.a #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Chimpanzee	MODERN SPECIES	16	APEH (ENSPTRG00000014928)	BSN (ENSPTRG00000014927) #9	DAG1 (ENSPTRG00000014926) #10	NICN1 (ENSPTRG00000032494) ##11	AMT (ENSPTRG00000014924) #12	TCTA (ENSPTRG00000014923)	RHOA (ENSPTRG00000014922) #14	GPX1 (ENSPTRG00000014921) #15	USP4 (ENSPTRG00000014920) #16	C3H3orf62 (ENSPTRG00000038744) #17	ENSPTRG00000038743	IHO1 (ENSPTRG00000014915) #18	C3H3orf84 (ENSPTRG00000050096) #19	KLHDC8B (ENSPTRG00000014914) #20	CCDC71 (ENSPTRG00000014913) #21	LAMB2 (ENSPTRG00000014912) #22	USP19 (ENSPTRG00000014911) #23	QARS1 (ENSPTRG00000014910) #24	QRICH1 (ENSPTRG00000023070) #25	ENSPTRG00000052442	IMPDH2 (ENSPTRG00000014908) #26	NDUFAF3 (ENSPTRG00000014907) #27	DALRD3 (ENSPTRG00000043430) #28	WDR6 (ENSPTRG00000014905) #29	P4HTM (ENSPTRG00000014903) #30	ARIH2 (ENSPTRG00000014902) #31	ENSPTRG00000038713	SLC25A20 (ENSPTRG00000014900) #33	PRKAR2A (ENSPTRG00000014898) #34	IP6K2 (ENSPTRG00000014897) #35	NCKIPSD (ENSPTRG00000033842) #36
Bonobo	MODERN SPECIES	16	RNF123 (ENSPPAG00000033919) #7	APEH (ENSPPAG00000041077)	BSN (ENSPPAG00000037774) #9	DAG1 (ENSPPAG00000035837) #10	NICN1 (ENSPPAG00000029365) ##11	AMT (ENSPPAG00000038969) #12	ENSPPAG00000041505	ENSPPAG00000031493 #14	ENSPPAG00000041840 #15	USP4 (ENSPPAG00000030591) #16	C3orf62 (ENSPPAG00000034256) #17	ENSPPAG00000028818	IHO1 (ENSPPAG00000041728) #18	C3orf84 (ENSPPAG00000028447) #19	KLHDC8B (ENSPPAG00000043715) #20	LAMB2 (ENSPPAG00000034500) #22	USP19 (ENSPPAG00000042808) #23	QRICH1 (ENSPPAG00000028104) #25	ENSPPAG00000040709	IMPDH2 (ENSPPAG00000028755) #26	NDUFAF3 (ENSPPAG00000037616) #27	DALRD3 (ENSPPAG00000037268) #28	WDR6 (ENSPPAG00000043035) #29	P4HTM (ENSPPAG00000034922) #30	ARIH2 (ENSPPAG00000037928) #31	ENSPPAG00000018979	SLC25A20 (ENSPPAG00000032464) #33	PRKAR2A (ENSPPAG00000032093) #34	IP6K2 (ENSPPAG00000027364) #35	NCKIPSD (ENSPPAG00000011360) #36	CELSR3 (ENSPPAG00000031153) #37
Human	MODERN SPECIES	15	BSN (ENSG00000164061) #9	DAG1 (ENSG00000173402) #10	NICN1 (ENSG00000145029) ##11	AMT (ENSG00000145020) #12	ENSG00000283189	TCTA (ENSG00000145022) #13	RHOA (ENSG00000067560) #14	ENSG00000290318	GPX1 (ENSG00000233276) #15	USP4 (ENSG00000114316) #16	C3orf62 (ENSG00000188315) #17	IHO1 (ENSG00000173421) #18	C3orf84 (ENSG00000236980) #19	KLHDC8B (ENSG00000185909) #20	CCDC71 (ENSG00000177352) #21	LAMB2 (ENSG00000172037) #22	USP19 (ENSG00000172046) #23	QARS1 (ENSG00000172053) #24	QRICH1 (ENSG00000198218) #25	ENSG00000290315	IMPDH2 (ENSG00000178035) #26	NDUFAF3 (ENSG00000178057) #27	DALRD3 (ENSG00000178149) #28	WDR6 (ENSG00000178252) #29	P4HTM (ENSG00000178467) #30	ARIH2 (ENSG00000177479) #31	SLC25A20 (ENSG00000178537) #33	PRKAR2A (ENSG00000114302) #34	IP6K2 (ENSG00000068745) #35	NCKIPSD (ENSG00000213672) #36	CELSR3 (ENSG00000008300) #37
Gorilla	MODERN SPECIES	16	DAG1 (ENSGGOG00000011890) #10	ENSGGOG00000025751	ENSGGOG00000038617 #12	NICN1 (ENSGGOG00000007674) ##11	ENSGGOG00000040183 #12	ENSGGOG00000040331	ENSGGOG00000012843	ENSGGOG00000012839 #15	ENSGGOG00000004591 #16	C3orf62 (ENSGGOG00000038583) #17	ENSGGOG00000028172	IHO1 (ENSGGOG00000000568) #18	ENSGGOG00000022187 #19	KLHDC8B (ENSGGOG00000006719) #20	CCDC71 (ENSGGOG00000026469) #21	LAMB2 (ENSGGOG00000014907) #22	USP19 (ENSGGOG00000014895) #23	QARS1 (ENSGGOG00000014882) #24	QRICH1 (ENSGGOG00000013251) #25	ENSGGOG00000044223	IMPDH (ENSGGOG00000013245) #26	NDUFAF3 (ENSGGOG00000013240) #27	DALRD3 (ENSGGOG00000001269) #28	WDR6 (ENSGGOG00000001268) #29	P4HTM (ENSGGOG00000017137) #30	ARIH2 (ENSGGOG00000017134) #31	ENSGGOG00000002053	SLC25A20 (ENSGGOG00000028046) #33	PRKAR2A (ENSGGOG00000009195) #34	IP6K2 (ENSGGOG00000016731) #35	NCKIPSD (ENSGGOG00000016717) #36
Gibbon	MODERN SPECIES	19	MST1 (ENSNLEG00000006866)	APEH (ENSNLEG00000006859)	BSN (ENSNLEG00000006857) #9	DAG1 (ENSNLEG00000006853) #10	NICN1 (ENSNLEG00000006851) ##11	AMT (ENSNLEG00000029101) #12	ENSNLEG00000006843	RHOA (ENSNLEG00000006839) #14	ENSNLEG00000028108 #15	USP4 (ENSNLEG00000006829) #16	C3orf62 (ENSNLEG00000006828) #17	ENSNLEG00000006827	IHO1 (ENSNLEG00000006825) #18	C3orf84 (ENSNLEG00000006823) #19	KLHDC8B (ENSNLEG00000006819) #20	LAMB2 (ENSNLEG00000006812) #22	USP19 (ENSNLEG00000006789) #23	ENSNLEG00000006772 #24	QRICH1 (ENSNLEG00000006752) #25	IMPDH2 (ENSNLEG00000006743) #26	ENSNLEG00000027818	NDUFAF3 (ENSNLEG00000006739) #27	ENSNLEG00000006730 #28	WDR6 (ENSNLEG00000006728) #29	P4HTM (ENSNLEG00000006725) #30	ARIH2 (ENSNLEG00000006710) #31	SLC25A20 (ENSNLEG00000028002) #33	PRKAR2A (ENSNLEG00000030036) #34	IP6K2 (ENSNLEG00000006680) #35	NCKIPSD (ENSNLEG00000006672) #36	CELSR3 (ENSNLEG00000006656) #37
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Cercopithecinae_d	ANCESTRAL SPECIES	44	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Drill	MODERN SPECIES	806	MST1 (ENSMLEG00000030117)	APEH (ENSMLEG00000035200)	BSN (ENSMLEG00000038838) #9	DAG1 (ENSMLEG00000034072) #10	NICN1 (ENSMLEG00000016079) ##11	AMT (ENSMLEG00000034972) #12	TCTA (ENSMLEG00000038364) #13	RHOA (ENSMLEG00000038343) #14	GPX1 (ENSMLEG00000037976) #15	USP4 (ENSMLEG00000041312) #16	C3orf62 (ENSMLEG00000044233) #17	ENSMLEG00000006991	IHO1 (ENSMLEG00000043657) #18	C3orf84 (ENSMLEG00000037676) #19	KLHDC8B (ENSMLEG00000040348) #20	LAMB2 (ENSMLEG00000037084) #22	USP19 (ENSMLEG00000026259) #23	QARS1 (ENSMLEG00000042334) #24	QRICH1 (ENSMLEG00000030523) #25	IMPDH2 (ENSMLEG00000038550) #26	NDUFAF3 (ENSMLEG00000038523) #27	DALRD3 (ENSMLEG00000040883) #28	WDR6 (ENSMLEG00000037052) #29	P4HTM (ENSMLEG00000034731) #30	ENSMLEG00000004260	ARIH2 (ENSMLEG00000044349) #31	ENSMLEG00000036827	SLC25A20 (ENSMLEG00000040319) #33	ENSMLEG00000039329 #34	IP6K2 (ENSMLEG00000029359) #35	NCKIPSD (ENSMLEG00000031325) #36
Sooty mangabey	MODERN SPECIES	415	APEH (ENSCATG00000031753)	BSN (ENSCATG00000013946) #9	DAG1 (ENSCATG00000034325) #10	NICN1 (ENSCATG00000032696) #11	AMT (ENSCATG00000040549) #12	TCTA (ENSCATG00000029652) #13	RHOA (ENSCATG00000018066) #14	GPX1 (ENSCATG00000012563) #15	USP4 (ENSCATG00000038050) #16	C3orf62 (ENSCATG00000038289) #17	ENSCATG00000040412	IHO1 (ENSCATG00000030087) #18	C3orf84 (ENSCATG00000044627) #19	KLHDC8B (ENSCATG00000038940) #20	CCDC71 (ENSCATG00000039714) #21	LAMB2 (ENSCATG00000045276) #22	USP19 (ENSCATG00000041103) #23	QARS1 (ENSCATG00000037275) #24	QRICH1 (ENSCATG00000030540) #25	ENSCATG00000040928	IMPDH2 (ENSCATG00000030723) #26	NDUFAF3 (ENSCATG00000039806) #27	DALRD3 (ENSCATG00000030159) #28	WDR6 (ENSCATG00000029974) #29	P4HTM (ENSCATG00000030517) #30	ARIH2 (ENSCATG00000008575) #31	ENSCATG00000038373	SLC25A20 (ENSCATG00000033267) #33	PRKAR2A (ENSCATG00000040692) #34	IP6K2 (ENSCATG00000029664) #35	NCKIPSD (ENSCATG00000018616) #36
Olive baboon	MODERN SPECIES	11	HYAL3 (ENSPANG00000019037)	HYAL2 (ENSPANG00000000779)	TUSC2 (ENSPANG00000006145)	RASSF1 (ENSPANG00000016900)	ZMYND10 (ENSPANG00000012439)	NPRL2 (ENSPANG00000009525)	CYB561D2 (ENSPANG00000008258)	TMEM115 (ENSPANG00000026398)	GPX1 (ENSPANG00000029358) #15	USP4 (ENSPANG00000019009) #16	C3orf62 (ENSPANG00000024952) #17	IHO1 (ENSPANG00000010030) #18	C3orf84 (ENSPANG00000010290) #19	KLHDC8B (ENSPANG00000022042) #20	CCDC71 (ENSPANG00000006140) #21	LAMB2 (ENSPANG00000016084) #22	USP19 (ENSPANG00000008390) #23	QARS1 (ENSPANG00000016987) #24	QRICH1 (ENSPANG00000015576) #25	IMPDH2 (ENSPANG00000007209) #26	NDUFAF3 (ENSPANG00000009002) #27	DALRD3 (ENSPANG00000007062) #28	WDR6 (ENSPANG00000015575) #29	P4HTM (ENSPANG00000022971) #30	ARIH2 (ENSPANG00000016339) #31	SLC25A20 (ENSPANG00000003132) #33	ENSPANG00000051118	PRKAR2A (ENSPANG00000012986) #34	IP6K2 (ENSPANG00000015976) #35	NCKIPSD (ENSPANG00000018329) #36	CELSR3 (ENSPANG00000013159) #37
Macaca	ANCESTRAL SPECIES	5	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00940000154612.n.gb	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00940000154612.n.gb	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00910000146976	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.k.a #31	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Rhesus	MODERN SPECIES	11	APEH (ENSMMUG00000014540)	BSN (ENSMMUG00000014537) #9	DAG1 (ENSMMUG00000004683) #10	NICN1 (ENSMMUG00000031780) ##11	AMT (ENSMMUG00000005452) #12	TCTA (ENSMMUG00000058903) #13	RHOA (ENSMMUG00000047476) #14	GPX1 (ENSMMUG00000012963) #15	C2H3orf62 (ENSMMUG00000049541) #17	USP4 (ENSMMUG00000000822) #16	IHO1 (ENSMMUG00000053526) #18	ENSMMUG00000062159	C2H3orf84 (ENSMMUG00000046787) #19	KLHDC8B (ENSMMUG00000002833) #20	CCDC71 (ENSMMUG00000002836) #21	LAMB2 (ENSMMUG00000002952) #22	USP19 (ENSMMUG00000002948) #23	QARS1 (ENSMMUG00000002943) #24	QRICH1 (ENSMMUG00000005660) #25	IMPDH2 (ENSMMUG00000005656) #26	NDUFAF3 (ENSMMUG00000058322) #27	DALRD3 (ENSMMUG00000005652) #28	WDR6 (ENSMMUG00000005649) #29	P4HTM (ENSMMUG00000006130) #30	ARIH2 (ENSMMUG00000039597) #31	SLC25A20 (ENSMMUG00000015418) #33	PRKAR2A (ENSMMUG00000000081) #34	IP6K2 (ENSMMUG00000014730) #35	NCKIPSD (ENSMMUG00000014720) #36	CELSR3 (ENSMMUG00000014707) #37	SLC26A6 (ENSMMUG00000031754)
Crab-eating macaque	MODERN SPECIES	11	APEH (ENSMFAG00000043600)	BSN (ENSMFAG00000042413) #9	DAG1 (ENSMFAG00000044374) #10	NICN1 (ENSMFAG00000044679) ##11	AMT (ENSMFAG00000003688) #12	TCTA (ENSMFAG00000003146) #13	RHOA (ENSMFAG00000036093) #14	GPX1 (ENSMFAG00000035887) #15	C3orf62 (ENSMFAG00000053457) #17	USP4 (ENSMFAG00000043326) #16	IHO1 (ENSMFAG00000043646) #18	ENSMFAG00000058702	C3orf84 (ENSMFAG00000053517) #19	KLHDC8B (ENSMFAG00000044788) #20	CCDC71 (ENSMFAG00000056130) #21	LAMB2 (ENSMFAG00000030537) #22	USP19 (ENSMFAG00000040355) #23	QARS1 (ENSMFAG00000033478) #24	QRICH1 (ENSMFAG00000030312) #25	IMPDH (ENSMFAG00000044947) #26	ENSMFAG00000061406	NDUFAF3 (ENSMFAG00000046307) #27	DALRD3 (ENSMFAG00000009642) #28	WDR6 (ENSMFAG00000037294) #29	P4HTM (ENSMFAG00000037567) #30	ARIH2 (ENSMFAG00000000139) #31	SLC25A20 (ENSMFAG00000037674) #33	PRKAR2A (ENSMFAG00000045665) #34	IP6K2 (ENSMFAG00000031559) #35	NCKIPSD (ENSMFAG00000031042) #36	CELSR3 (ENSMFAG00000045461) #37
Pig-tailed macaque	MODERN SPECIES	563	APEH (ENSMNEG00000042039)	BSN (ENSMNEG00000044956) #9	DAG1 (ENSMNEG00000002150) #10	NICN1 (ENSMNEG00000028099) ##11	AMT (ENSMNEG00000044694) #12	TCTA (ENSMNEG00000029672) #13	RHOA (ENSMNEG00000042186) #14	GPX1 (ENSMNEG00000043723) #15	USP4 (ENSMNEG00000036652) #16	C3orf62 (ENSMNEG00000041595) #17	ENSMNEG00000030741	IHO1 (ENSMNEG00000041960) #18	ENSMNEG00000040259	C3orf84 (ENSMNEG00000040997) #19	KLHDC8B (ENSMNEG00000033867) #20	LAMB2 (ENSMNEG00000044894) #22	USP19 (ENSMNEG00000033317) #23	QARS1 (ENSMNEG00000035096) #24	QRICH1 (ENSMNEG00000029906) #25	ENSMNEG00000014164	IMPDH2 (ENSMNEG00000036421) #26	NDUFAF3 (ENSMNEG00000033547) #27	DALRD3 (ENSMNEG00000043361) #28	WDR6 (ENSMNEG00000044323) #29	P4HTM (ENSMNEG00000036306) #30	ARIH2 (ENSMNEG00000040123) #31	ENSMNEG00000037742	SLC25A20 (ENSMNEG00000039918) #33	PRKAR2A (ENSMNEG00000029768) #34	IP6K2 (ENSMNEG00000043825) #35	NCKIPSD (ENSMNEG00000020586) #36
Vervet Monkey	MODERN SPECIES	14	RNF123 (ENSCSAG00000014794) #7	MST1 (ENSCSAG00000014934)	APEH (ENSCSAG00000014962)	BSN (ENSCSAG00000014973) #9	DAG1 (ENSCSAG00000014979) #10	NICN1 (ENSCSAG00000014988) ##11	AMT (ENSCSAG00000015048) #12	TCTA (ENSCSAG00000015067) #13	RHOA (ENSCSAG00000015074) #14	GPX1 (ENSCSAG00000015079) #15	USP4 (ENSCSAG00000015089) #16	C3orf62 (ENSCSAG00000015100) #17	IHO1 (ENSCSAG00000015114) #18	C3orf84 (ENSCSAG00000015128) #19	KLHDC8B (ENSCSAG00000015133) #20	LAMB2 (ENSCSAG00000015160) #22	USP19 (ENSCSAG00000015179) #23	QARS1 (ENSCSAG00000015198) #24	QRICH1 (ENSCSAG00000015224) #25	IMPDH2 (ENSCSAG00000015243) #26	NDUFAF3 (ENSCSAG00000015235) #27	DALRD3 (ENSCSAG00000015253) #28	WDR6 (ENSCSAG00000015270) #29	P4HTM (ENSCSAG00000015286) #30	ARIH2 (ENSCSAG00000015355) #31	SLC25A20 (ENSCSAG00000015383) #33	PRKAR2A (ENSCSAG00000015391) #34	IP6K2 (ENSCSAG00000015398) #35	NCKIPSD (ENSCSAG00000015406) #36	CELSR3 (ENSCSAG00000015477) #37	SLC26A6 (ENSCSAG00000015510)
Rhinopithecus	ANCESTRAL SPECIES	41	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505.a.b ##11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150.c #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00910000147634	ENSGT00940000154875.k.a #31	ENSGT00390000009949	ENSGT00940000157863.g #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Golden snub-nosed monkey	MODERN SPECIES	656	MST1 (ENSRROG00000027621)	APEH (ENSRROG00000003710)	BSN (ENSRROG00000032997) #9	DAG1 (ENSRROG00000042606) #10	NICN1 (ENSRROG00000035488) ##11	AMT (ENSRROG00000031575) #12	TCTA (ENSRROG00000038446) #13	RHOA (ENSRROG00000031894) #14	ENSRROG00000031817 #15	USP4 (ENSRROG00000037639) #16	C3orf62 (ENSRROG00000025217) #17	ENSRROG00000029834	IHO1 (ENSRROG00000039947) #18	C3orf84 (ENSRROG00000044252) #19	KLHDC8B (ENSRROG00000031709) #20	LAMB2 (ENSRROG00000036637) #22	USP19 (ENSRROG00000034752) #23	QARS1 (ENSRROG00000034983) #24	QRICH1 (ENSRROG00000044579) #25	IMPDH2 (ENSRROG00000004338) #26	NDUFAF3 (ENSRROG00000034732) #27	ENSRROG00000038492	DALRD3 (ENSRROG00000038168) #28	WDR6 (ENSRROG00000033452) #29	P4HTM (ENSRROG00000032082) #30	ARIH2 (ENSRROG00000038192) #31	ENSRROG00000035582	ENSRROG00000037514	SLC25A20 (ENSRROG00000032888) #33	PRKAR2A (ENSRROG00000042248) #34	IP6K2 (ENSRROG00000031159) #35
Black snub-nosed monkey	MODERN SPECIES	238	BSN (ENSRBIG00000031944) #9	ENSRBIG00000027212	DAG1 (ENSRBIG00000030053) #10	NICN1 (ENSRBIG00000027144) ##11	AMT (ENSRBIG00000041194) #12	TCTA (ENSRBIG00000033807) #13	ENSRBIG00000005780	ENSRBIG00000044204 #14	ENSRBIG00000038215 #15	USP4 (ENSRBIG00000038187) #16	C3orf62 (ENSRBIG00000037968) #17	ENSRBIG00000033062	IHO1 (ENSRBIG00000038941) #18	C3orf84 (ENSRBIG00000033269) #19	KLHDC8B (ENSRBIG00000044493) #20	LAMB2 (ENSRBIG00000035222) #22	USP19 (ENSRBIG00000034712) #23	QARS1 (ENSRBIG00000030327) #24	QRICH1 (ENSRBIG00000020566) #25	IMPDH2 (ENSRBIG00000036996) #26	ENSRBIG00000035262	NDUFAF3 (ENSRBIG00000038471) #27	DALRD3 (ENSRBIG00000042882) #28	WDR6 (ENSRBIG00000028469) #29	P4HTM (ENSRBIG00000043214) #30	ARIH2 (ENSRBIG00000042561) #31	ENSRBIG00000039456	ENSRBIG00000034860	SLC25A20 (ENSRBIG00000040981) #33	PRKAR2A (ENSRBIG00000014609) #34	IP6K2 (ENSRBIG00000029421) #35
Tarsier	MODERN SPECIES	6165												ENSTSYG00000035179	CUNH3orf84 (ENSTSYG00000036075) #19	KLHDC8B (ENSTSYG00000027898) #20	CCDC71 (ENSTSYG00000030196) #21	LAMB2 (ENSTSYG00000008546) #22	USP19 (ENSTSYG00000008541) #23	QARS1 (ENSTSYG00000008462) #24	QRICH1 (ENSTSYG00000013448) #25	IMPDH2 (ENSTSYG00000013437) #26	ENSTSYG00000031492	NDUFAF3 (ENSTSYG00000013419) #27	DALRD3 (ENSTSYG00000029736) #28	WDR6 (ENSTSYG00000032831) #29	P4HTM (ENSTSYG00000012815) #30	ARIH2 (ENSTSYG00000004337) #31	SLC25A20 (ENSTSYG00000014696) #33	PRKAR2A (ENSTSYG00000014694) #34	IP6K2 (ENSTSYG00000002982) #35	NCKIPSD (ENSTSYG00000013422) #36	ENSTSYG00000032751
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Lemuriformes	ANCESTRAL SPECIES	17	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00550000074807.d	ENSGT00940000163080	ENSGT00940000162391	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Lemuriformes_a	ANCESTRAL SPECIES	6	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00980000198877	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00550000074807.d	ENSGT00940000163080	ENSGT00940000162391	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Coquerels sifaka	MODERN SPECIES	50	RNF123 (ENSPCOG00000013664) #7	MST1 (ENSPCOG00000005348)	APEH (ENSPCOG00000028013)	BSN (ENSPCOG00000025030) #9	DAG1 (ENSPCOG00000023915) #10	NICN1 (ENSPCOG00000021271) #11	AMT (ENSPCOG00000016597) #12	TCTA (ENSPCOG00000018175) #13	RHOA (ENSPCOG00000014495) #14	GPX1 (ENSPCOG00000023726) #15	USP4 (ENSPCOG00000023286) #16	C3orf62 (ENSPCOG00000027475) #17	ENSPCOG00000023086	C3orf84 (ENSPCOG00000019596) #19	KLHDC8B (ENSPCOG00000005585) #20	LAMB2 (ENSPCOG00000003248) #22	USP19 (ENSPCOG00000021600) #23	QARS1 (ENSPCOG00000022610) #24	QRICH1 (ENSPCOG00000028140) #25	IMPDH2 (ENSPCOG00000027001) #26	NDUFAF3 (ENSPCOG00000014463) #27	DALRD3 (ENSPCOG00000027419) #28	WDR6 (ENSPCOG00000018888) #29	P4HTM (ENSPCOG00000006504) #30	ARIH2 (ENSPCOG00000019150) #31	SLC25A20 (ENSPCOG00000028137) #33	ENSPCOG00000028707	PRKAR2A (ENSPCOG00000028683) #34	IP6K2 (ENSPCOG00000021856) #35	NCKIPSD (ENSPCOG00000008716) #36	CELSR3 (ENSPCOG00000025025) #37
Greater bamboo lemur	MODERN SPECIES	949				NICN1 (ENSPSMG00000026013) #11	AMT (ENSPSMG00000026012) #12	TCTA (ENSPSMG00000026011) #13	RHOA (ENSPSMG00000026009) #14	GPX1 (ENSPSMG00000026008) #15	ENSPSMG00000026006	USP4 (ENSPSMG00000026005) #16	C3orf62 (ENSPSMG00000026004) #17	ENSPSMG00000026003	C3orf84 (ENSPSMG00000026002) #19	KLHDC8B (ENSPSMG00000026001) #20	CCDC71 (ENSPSMG00000026000) #21	LAMB2 (ENSPSMG00000025999) #22	USP19 (ENSPSMG00000025998) #23	QARS1 (ENSPSMG00000025997) #24	QRICH1 (ENSPSMG00000025996) #25	NDUFAF3 (ENSPSMG00000025995) #27	DALRD3 (ENSPSMG00000025993) #28	WDR6 (ENSPSMG00000025992) #29	P4HTM (ENSPSMG00000025991) #30	ARIH2 (ENSPSMG00000025990) #31	SLC25A20 (ENSPSMG00000025989) #33	PRKAR2A (ENSPSMG00000025988) #34	IP6K2 (ENSPSMG00000025987) #35	NCKIPSD (ENSPSMG00000025986) #36	CELSR3 (ENSPSMG00000025984) #37	SLC26A6 (ENSPSMG00000025983)	TMEM89 (ENSPSMG00000025982)
Mouse lemur	MODERN SPECIES	5	MST1 (ENSMICG00000041447)	APEH (ENSMICG00000010662)	BSN (ENSMICG00000010621) #9	DAG1 (ENSMICG00000010618) #10	NICN1 (ENSMICG00000001261) #11	AMT (ENSMICG00000001251) #12	TCTA (ENSMICG00000043725) #13	RHOA (ENSMICG00000032818) #14	GPX1 (ENSMICG00000034931) #15	USP4 (ENSMICG00000043936) #16	C3orf62 (ENSMICG00000044230) #17	IHO1 (ENSMICG00000029553) #18	C3orf84 (ENSMICG00000026553) #19	KLHDC8B (ENSMICG00000007972) #20	CCDC71 (ENSMICG00000034099) #21	LAMB2 (ENSMICG00000007913) #22	USP19 (ENSMICG00000007895) #23	QARS1 (ENSMICG00000007885) #24	QRICH1 (ENSMICG00000028751) #25	IMPDH2 (ENSMICG00000007866) #26	NDUFAF3 (ENSMICG00000007862) #27	DALRD3 (ENSMICG00000007858) #28	WDR6 (ENSMICG00000007852) #29	P4HTM (ENSMICG00000007843) #30	ARIH2 (ENSMICG00000007837) #31	SLC25A20 (ENSMICG00000005028) #33	ENSMICG00000032432	PRKAR2A (ENSMICG00000001067) #34	ENSMICG00000034139	IP6K2 (ENSMICG00000014451) #35	NCKIPSD (ENSMICG00000030986) #36
Bushbaby	MODERN SPECIES	294	APEH (ENSOGAG00000011788)	BSN (ENSOGAG00000025887) #9	DAG1 (ENSOGAG00000014849) #10	NICN1 (ENSOGAG00000001885) #11	AMT (ENSOGAG00000001884) #12	TCTA (ENSOGAG00000001882) #13	ENSOGAG00000028489	GPX1 (ENSOGAG00000001880) #15	USP4 (ENSOGAG00000001877) #16	C3orf62 (ENSOGAG00000001876) #17	ENSOGAG00000029272	IHO1 (ENSOGAG00000029823) #18	ENSOGAG00000034043	KLHDC8B (ENSOGAG00000003967) #20	CCDC71 (ENSOGAG00000015471) #21	LAMB2 (ENSOGAG00000003963) #22	USP19 (ENSOGAG00000003957) #23	QARS1 (ENSOGAG00000003954) #24	QRICH1 (ENSOGAG00000033740) #25	IMPDH2 (ENSOGAG00000003945) #26	NDUFAF3 (ENSOGAG00000003941) #27	DALRD3 (ENSOGAG00000003937) #28	WDR6 (ENSOGAG00000003935) #29	P4HTM (ENSOGAG00000003931) #30	ARIH2 (ENSOGAG00000002263) #31	SLC25A20 (ENSOGAG00000001847) #33	PRKAR2A (ENSOGAG00000006822) #34	IP6K2 (ENSOGAG00000006819) #35	NCKIPSD (ENSOGAG00000031535) #36	CELSR3 (ENSOGAG00000006801) #37	SLC26A6 (ENSOGAG00000032822)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Glires	ANCESTRAL SPECIES	2	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836.i.b #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000164003	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836.i.b #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Guinea pig	MODERN SPECIES	8	RNF123 (ENSCPOG00000011432) #7	MST1 (ENSCPOG00000011422)	APEH (ENSCPOG00000011416)	BSN (ENSCPOG00000040726) #9	DAG1 (ENSCPOG00000034832) #10	NICN1 (ENSCPOG00000019324) #11	AMT (ENSCPOG00000023233) #12	TCTA (ENSCPOG00000035311) #13	RHOA (ENSCPOG00000014073) #14	USP4 (ENSCPOG00000010272) #16	C3orf62 (ENSCPOG00000026439) #17	IHO1 (ENSCPOG00000013672) #18	C3orf84 (ENSCPOG00000024951) #19	KLHDC8B (ENSCPOG00000031477) #20	CCDC71 (ENSCPOG00000010009) #21	LAMB2 (ENSCPOG00000009993) #22	USP19 (ENSCPOG00000009975) #23	QARS1 (ENSCPOG00000009967) #24	ENSCPOG00000009958 #25	IMPDH2 (ENSCPOG00000009955) #26	NDUFAF3 (ENSCPOG00000009951) #27	DALRD3 (ENSCPOG00000022699) #28	WDR6 (ENSCPOG00000000708) #29	P4HTM (ENSCPOG00000008347) #30	ARIH2 (ENSCPOG00000008337) #31	ENSCPOG00000012248	SLC25A20 (ENSCPOG00000009309) #33	PRKAR2A (ENSCPOG00000001218) #34	IP6K2 (ENSCPOG00000007856) #35	NCKIPSD (ENSCPOG00000020345) #36	CELSR3 (ENSCPOG00000034949) #37
Hystricomorpha_b	ANCESTRAL SPECIES	63	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000164003	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836.i.b #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Degu	MODERN SPECIES	49	MST1 (ENSODEG00000018247)	APEH (ENSODEG00000018298)	BSN (ENSODEG00000018261) #9	DAG1 (ENSODEG00000018370) #10	ENSODEG00000018172 #11	ENSODEG00000018166 #12	TCTA (ENSODEG00000018418) #13	ENSODEG00000018416	GPX1 (ENSODEG00000018240) #15	USP4 (ENSODEG00000018126) #16	C3orf62 (ENSODEG00000018275) #17	IHO1 (ENSODEG00000018168) #18	C3orf84 (ENSODEG00000018152) #19	KLHDC8B (ENSODEG00000018149) #20	CCDC71 (ENSODEG00000018170) #21	LAMB2 (ENSODEG00000018161) #22	USP19 (ENSODEG00000018209) #23	ENSODEG00000018381 #24	QRICH1 (ENSODEG00000018211) #25	ENSODEG00000018332 #26	NDUFAF3 (ENSODEG00000018257) #27	DALRD3 (ENSODEG00000018251) #28	WDR6 (ENSODEG00000018229) #29	P4HTM (ENSODEG00000018157) #30	ARIH2 (ENSODEG00000018288) #31	SLC25A20 (ENSODEG00000018156) #33	ENSODEG00000018180 #34	IP6K2 (ENSODEG00000018212) #35	NCKIPSD (ENSODEG00000018165) #36	CELSR3 (ENSODEG00000018319) #37	SLC26A6 (ENSODEG00000018141)
Long-tailed chinchilla	MODERN SPECIES	239	GMPPB (ENSCLAG00000009088)	AMIGO3 (ENSCLAG00000018108)	RNF123 (ENSCLAG00000008303) #7	MST1 (ENSCLAG00000010949)	APEH (ENSCLAG00000006987)	BSN (ENSCLAG00000006929) #9	DAG1 (ENSCLAG00000009430) #10	NICN1 (ENSCLAG00000007906) #11	AMT (ENSCLAG00000007577) #12	TCTA (ENSCLAG00000009163) #13	RHOA (ENSCLAG00000007531) #14	USP4 (ENSCLAG00000006925) #16	C3orf84 (ENSCLAG00000006773) #19	KLHDC8B (ENSCLAG00000007333) #20	CCDC71 (ENSCLAG00000006770) #21	LAMB2 (ENSCLAG00000012420) #22	USP19 (ENSCLAG00000009469) #23	QARS1 (ENSCLAG00000009982) #24	QRICH1 (ENSCLAG00000011484) #25	NDUFAF3 (ENSCLAG00000010367) #27	IMPDH2 (ENSCLAG00000010876) #26	DALRD3 (ENSCLAG00000010911) #28	WDR6 (ENSCLAG00000013367) #29	P4HTM (ENSCLAG00000012640) #30	ARIH2 (ENSCLAG00000007056) #31	SLC25A20 (ENSCLAG00000006666) #33	PRKAR2A (ENSCLAG00000013198) #34	IP6K2 (ENSCLAG00000016270) #35	NCKIPSD (ENSCLAG00000010729) #36	CELSR3 (ENSCLAG00000015824) #37	SLC26A6 (ENSCLAG00000011172)
Naked mole-rat female	MODERN SPECIES	27	MST1 (ENSHGLG00000014647)	BSN (ENSHGLG00000014582) #9	DAG1 (ENSHGLG00000035745) #10	ENSHGLG00000049998	ENSHGLG00000043499	NICN1 (ENSHGLG00000014501) #11	AMT (ENSHGLG00000019416) #12	TCTA (ENSHGLG00000014711) #13	RHOA (ENSHGLG00000037920) #14	GPX1 (ENSHGLG00000014333) #15	USP4 (ENSHGLG00000014262) #16	C3orf62 (ENSHGLG00000032235) #17	CCDC36 (ENSHGLG00000045203) #18	C3orf84 (ENSHGLG00000047605) #19	KLHDC8B (ENSHGLG00000012255) #20	LAMB2 (ENSHGLG00000014718) #22	USP19 (ENSHGLG00000014432) #23	QARS1 (ENSHGLG00000014071) #24	QRICH1 (ENSHGLG00000013818) #25	IMPDH2 (ENSHGLG00000013375) #26	ENSHGLG00000012830 #27	ENSHGLG00000037627 #28	ENSHGLG00000044769 #29	P4HTM (ENSHGLG00000012350) #30	ENSHGLG00000012140 #31	Ctnnb1 (ENSHGLG00000014308)	ENSHGLG00000013251	ENSHGLG00000044049	TRAK1 (ENSHGLG00000012903)	CCK (ENSHGLG00000044393)	ENSHGLG00000012412
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Marmotini	ANCESTRAL SPECIES	25	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Marmotini_b	ANCESTRAL SPECIES	32	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Arctic ground squirrel	MODERN SPECIES	26	AMIGO3 (ENSUPAG00010022704)	MST1 (ENSUPAG00010022707)	APEH (ENSUPAG00010022710)	BSN (ENSUPAG00010022714) #9	DAG1 (ENSUPAG00010022721) #10	NICN1 (ENSUPAG00010022727) #11	AMT (ENSUPAG00010022728) #12	TCTA (ENSUPAG00010022731) #13	RHOA (ENSUPAG00010022734) #14	GPX1 (ENSUPAG00010022736) #15	USP4 (ENSUPAG00010022743) #16	IHO1 (ENSUPAG00010022748) #18	C3orf84 (ENSUPAG00010022750) #19	KLHDC8B (ENSUPAG00010022751) #20	CCDC71 (ENSUPAG00010022756) #21	LAMB2 (ENSUPAG00010022760) #22	USP19 (ENSUPAG00010022767) #23	QARS1 (ENSUPAG00010022784) #24	QRICH1 (ENSUPAG00010022787) #25	IMPDH2 (ENSUPAG00010022794) #26	NDUFAF3 (ENSUPAG00010022795) #27	DALRD3 (ENSUPAG00010022797) #28	WDR6 (ENSUPAG00010022801) #29	P4HTM (ENSUPAG00010022803) #30	ARIH2 (ENSUPAG00010022807) #31	SLC25A20 (ENSUPAG00010022813) #33	PRKAR2A (ENSUPAG00010022817) #34	ENSUPAG00010022820	IP6K2 (ENSUPAG00010022821) #35	NCKIPSD (ENSUPAG00010022823) #36	CELSR3 (ENSUPAG00010000011) #37
Squirrel	MODERN SPECIES	129	APEH (ENSSTOG00000013676)	BSN (ENSSTOG00000024936) #9	DAG1 (ENSSTOG00000023610) #10	NICN1 (ENSSTOG00000012434) #11	ENSSTOG00000012428 #12	TCTA (ENSSTOG00000011135) #13	RHOA (ENSSTOG00000004561) #14	GPX1 (ENSSTOG00000025544) #15	USP4 (ENSSTOG00000011315) #16	C3orf62 (ENSSTOG00000011308) #17	IHO1 (ENSSTOG00000011292) #18	C3orf84 (ENSSTOG00000025817) #19	KLHDC8B (ENSSTOG00000025019) #20	CCDC71 (ENSSTOG00000025759) #21	ENSSTOG00000031228	LAMB2 (ENSSTOG00000001866) #22	USP19 (ENSSTOG00000001848) #23	QARS1 (ENSSTOG00000001822) #24	QRICH1 (ENSSTOG00000001813) #25	NDUFAF3 (ENSSTOG00000001799) #27	IMPDH2 (ENSSTOG00000001805) #26	DALRD3 (ENSSTOG00000001789) #28	WDR6 (ENSSTOG00000001782) #29	P4HTM (ENSSTOG00000001776) #30	ARIH2 (ENSSTOG00000001766) #31	SLC25A20 (ENSSTOG00000003327) #33	PRKAR2A (ENSSTOG00000003312) #34	IP6K2 (ENSSTOG00000003496) #35	NCKIPSD (ENSSTOG00000023487) #36	CELSR3 (ENSSTOG00000028364) #37	SLC26A6 (ENSSTOG00000027369)
Alpin marmot	MODERN SPECIES	19	MST1 (ENSMMMG00000004828)	APEH (ENSMMMG00000004875)	BSN (ENSMMMG00000004916) #9	DAG1 (ENSMMMG00000004993) #10	NICN1 (ENSMMMG00000005004) #11	AMT (ENSMMMG00000005018) #12	ENSMMMG00000005039 #13	RHOA (ENSMMMG00000005067) #14	GPX1 (ENSMMMG00000005079) #15	USP4 (ENSMMMG00000005114) #16	C3orf62 (ENSMMMG00000005162) #17	IHO1 (ENSMMMG00000005177) #18	C3orf84 (ENSMMMG00000005193) #19	KLHDC8B (ENSMMMG00000005206) #20	CCDC71 (ENSMMMG00000005226) #21	LAMB2 (ENSMMMG00000005235) #22	USP19 (ENSMMMG00000005310) #23	QARS1 (ENSMMMG00000005497) #24	QRICH1 (ENSMMMG00000005623) #25	IMPDH2 (ENSMMMG00000005658) #26	NDUFAF3 (ENSMMMG00000005669) #27	DALRD3 (ENSMMMG00000005693) #28	WDR6 (ENSMMMG00000005711) #29	P4HTM (ENSMMMG00000005724) #30	ARIH2 (ENSMMMG00000005739) #31	SLC25A20 (ENSMMMG00000005774) #33	PRKAR2A (ENSMMMG00000005788) #34	IP6K2 (ENSMMMG00000005847) #35	NCKIPSD (ENSMMMG00000005877) #36	CELSR3 (ENSMMMG00000005898) #37	SLC26A6 (ENSMMMG00000006052)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Myomorpha	ANCESTRAL SPECIES	26	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Muroidea	ANCESTRAL SPECIES	27	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Cricetidae_B	ANCESTRAL SPECIES	23	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Prairie vole	MODERN SPECIES	13	Mst1 (ENSMOCG00000006858)	Apeh (ENSMOCG00000016042)	Bsn (ENSMOCG00000009384) #9	Dag1 (ENSMOCG00000002328) #10	Nicn1 (ENSMOCG00000022631) #11	Amt (ENSMOCG00000009959) #12	Tcta (ENSMOCG00000012055) #13	Rhoa (ENSMOCG00000015603) #14	Gpx1 (ENSMOCG00000017016) #15	Usp4 (ENSMOCG00000022148) #16	1700102P08Rik (ENSMOCG00000010012) #17	Iho1 (ENSMOCG00000018017) #18	BC048562 (ENSMOCG00000019645) #19	Klhdc8b (ENSMOCG00000020213) #20	Ccdc71 (ENSMOCG00000003307) #21	Lamb2 (ENSMOCG00000020853) #22	ENSMOCG00000015175	Usp19 (ENSMOCG00000017005) #23	Qars (ENSMOCG00000019363) #24	Qrich1 (ENSMOCG00000005427) #25	Impdh2 (ENSMOCG00000012803) #26	ENSMOCG00000018646 #27	Dalrd3 (ENSMOCG00000000771) #28	Wdr6 (ENSMOCG00000014975) #29	P4htm (ENSMOCG00000022327) #30	Arih2 (ENSMOCG00000016530) #31	Slc25a20 (ENSMOCG00000022798) #33	Prkar2a (ENSMOCG00000012678) #34	IP6K2 (ENSMOCG00000007892) #35	NCKIPSD (ENSMOCG00000021027) #36	Celsr3 (ENSMOCG00000014537) #37
Northern American deer mouse	MODERN SPECIES	20	Mst1 (ENSPEMG00000010324)	Apeh (ENSPEMG00000006847)	Bsn (ENSPEMG00000004268) #9	Dag1 (ENSPEMG00000027318) #10	Nicn1 (ENSPEMG00000010264) #11	Amt (ENSPEMG00000001896) #12	Tcta (ENSPEMG00000025839) #13	Rhoa (ENSPEMG00000020093) #14	Gpx1 (ENSPEMG00000013554) #15	Usp4 (ENSPEMG00000010920) #16	1700102P08Rik (ENSPEMG00000014836) #17	Iho1 (ENSPEMG00000013425) #18	BC048562 (ENSPEMG00000008132) #19	Klhdc8b (ENSPEMG00000000378) #20	Ccdc71 (ENSPEMG00000029170) #21	Lamb2 (ENSPEMG00000002529) #22	Usp19 (ENSPEMG00000024178) #23	Qars (ENSPEMG00000017730) #24	Qrich1 (ENSPEMG00000001882) #25	Impdh2 (ENSPEMG00000005350) #26	Ndufaf3 (ENSPEMG00000017882) #27	Wdr6 (ENSPEMG00000023545) #29	P4htm (ENSPEMG00000023451) #30	Arih2 (ENSPEMG00000011412) #31	Slc25a20 (ENSPEMG00000010197) #33	Prkar2a (ENSPEMG00000011519) #34	ENSPEMG00000024370	Ip6k2 (ENSPEMG00000014148) #35	Nckipsd (ENSPEMG00000023944) #36	Celsr3 (ENSPEMG00000008073) #37	Slc26a6 (ENSPEMG00000001060)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Chinese hamster chok1gshd	MODERN SPECIES	284	Mst1 (ENSCGRG00001013799)	Apeh (ENSCGRG00001002191)	Bsn (ENSCGRG00001021798) #9	Dag1 (ENSCGRG00001013896) #10	Nicn1 (ENSCGRG00001012420) #11	Amt (ENSCGRG00001000903) #12	Tcta (ENSCGRG00001010040) #13	Rhoa (ENSCGRG00001019741) #14	Gpx1 (ENSCGRG00001017592) #15	Usp4 (ENSCGRG00001011482) #16	1700102P08Rik (ENSCGRG00001024671) #17	Iho1 (ENSCGRG00001013280) #18	BC048562 (ENSCGRG00001021532) #19	Klhdc8b (ENSCGRG00001015630) #20	Ccdc71 (ENSCGRG00001005293) #21	Lamb2 (ENSCGRG00001021919) #22	Usp19 (ENSCGRG00001020926) #23	Qars (ENSCGRG00001021363) #24	Qrich1 (ENSCGRG00001017320) #25	Impdh2 (ENSCGRG00001002016) #26	Ndufaf3 (ENSCGRG00001023494) #27	Dalrd3 (ENSCGRG00001020135) #28	Wdr6 (ENSCGRG00001020890) #29	P4htm (ENSCGRG00001024387) #30	Arih2 (ENSCGRG00001020111) #31	Slc25a20 (ENSCGRG00001023443) #33	Prkar2a (ENSCGRG00001012291) #34	Ip6k2 (ENSCGRG00001002916) #35	Nckipsd (ENSCGRG00001022184) #36	Celsr3 (ENSCGRG00001010066) #37	Slc26a6 (ENSCGRG00001016449)
Golden Hamster	MODERN SPECIES	667	Gmppb (ENSMAUG00000020162)	Rnf123 (ENSMAUG00000021933) #7	Amigo3 (ENSMAUG00000010259)	Mst1 (ENSMAUG00000020004)	ENSMAUG00000007244	Bsn (ENSMAUG00000021019) #9	Dag1 (ENSMAUG00000009208) #10	Nicn1 (ENSMAUG00000008091) #11	Amt (ENSMAUG00000009244) #12	Usp4 (ENSMAUG00000022197) #16	1700102P08Rik (ENSMAUG00000007415) #17	Iho1 (ENSMAUG00000014009) #18	BC048562 (ENSMAUG00000018756) #19	Klhdc8b (ENSMAUG00000022051) #20	Ccdc71 (ENSMAUG00000003305) #21	Lamb2 (ENSMAUG00000022154) #22	Usp19 (ENSMAUG00000015842) #23	Qars (ENSMAUG00000022218) #24	Qrich1 (ENSMAUG00000001411) #25	Impdh2 (ENSMAUG00000006873) #26	Ndufaf3 (ENSMAUG00000014556) #27	Dalrd3 (ENSMAUG00000008143) #28	Wdr6 (ENSMAUG00000020736) #29	P4htm (ENSMAUG00000011007) #30	Arih2 (ENSMAUG00000009916) #31	Slc25a20 (ENSMAUG00000014722) #33	Prkar2a (ENSMAUG00000008358) #34	Ip6k2 (ENSMAUG00000008558) #35	Nckipsd (ENSMAUG00000012099) #36	Celsr3 (ENSMAUG00000018857) #37	Slc26a6 (ENSMAUG00000014243)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Mus	ANCESTRAL SPECIES	4	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.s #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Mus_C	ANCESTRAL SPECIES	23	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.s #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875.m #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
spretus	MODERN SPECIES	18	Mst1 (MGP_SPRETEiJ_G0033821)	Apeh (MGP_SPRETEiJ_G0033822)	Bsn (MGP_SPRETEiJ_G0033823) #9	Dag1 (MGP_SPRETEiJ_G0033824) #10	Nicn1 (MGP_SPRETEiJ_G0033825) #11	Amt (MGP_SPRETEiJ_G0033826) #12	MGP_SPRETEiJ_G0033827 #15	Tcta (MGP_SPRETEiJ_G0033828) #13	MGP_SPRETEiJ_G0033829	Usp4 (MGP_SPRETEiJ_G0033830) #16	1700102P08Rik (MGP_SPRETEiJ_G0033831) #17	Iho1 (MGP_SPRETEiJ_G0033832) #18	BC048562 (MGP_SPRETEiJ_G0033833) #19	Klhdc8b (MGP_SPRETEiJ_G0033834) #20	Ccdc71 (MGP_SPRETEiJ_G0033835) #21	Lamb2 (MGP_SPRETEiJ_G0033836) #22	Usp19 (MGP_SPRETEiJ_G0033837) #23	Qars (MGP_SPRETEiJ_G0033838) #24	Qrich1 (MGP_SPRETEiJ_G0033839) #25	Impdh2 (MGP_SPRETEiJ_G0033840) #26	Ndufaf3 (MGP_SPRETEiJ_G0033841) #27	Dalrd3 (MGP_SPRETEiJ_G0033842) #28	Wdr6 (MGP_SPRETEiJ_G0033843) #29	P4htm (MGP_SPRETEiJ_G0033844) #30	Arih2 (MGP_SPRETEiJ_G0033845) #31	Slc25a20 (MGP_SPRETEiJ_G0033846) #33	Prkar2a (MGP_SPRETEiJ_G0033847) #34	Ip6k2 (MGP_SPRETEiJ_G0033848) #35	Nckipsd (MGP_SPRETEiJ_G0033849) #36	Celsr3 (MGP_SPRETEiJ_G0033850) #37	Slc26a6 (MGP_SPRETEiJ_G0033851)
Steppe mouse	MODERN SPECIES	2942	Bsn (ENSMSIG00000024136) #9	ENSMSIG00000024201	Dag1 (ENSMSIG00000024222) #10	Nicn1 (ENSMSIG00000024241) #11	Amt (ENSMSIG00000024252) #12	Tcta (ENSMSIG00000024280) #13	Rhoa (ENSMSIG00000024290) #14	Gpx1 (ENSMSIG00000024310) #15	Usp4 (ENSMSIG00000024333) #16	ENSMSIG00000024427	1700102P08Rik (ENSMSIG00000024429) #17	Iho1 (ENSMSIG00000024437) #18	BC048562 (ENSMSIG00000024449) #19	Klhdc8b (ENSMSIG00000024460) #20	Ccdc71 (ENSMSIG00000024477) #21	Lamb2 (ENSMSIG00000024492) #22	Usp19 (ENSMSIG00000024529) #23	Qars (ENSMSIG00000024675) #24	Qrich1 (ENSMSIG00000024752) #25	Impdh2 (ENSMSIG00000000088) #26	Ndufaf3 (ENSMSIG00000000202) #27	Dalrd3 (ENSMSIG00000000255) #28	Wdr6 (ENSMSIG00000000332) #29	P4htm (ENSMSIG00000000386) #30	ENSMSIG00000000455 #31	Slc25a20 (ENSMSIG00000000560) #33	Prkar2a (ENSMSIG00000000599) #34	ENSMSIG00000000689	Ip6k2 (ENSMSIG00000000718) #35	Nckipsd (ENSMSIG00000000798) #36	Celsr3 (ENSMSIG00000000863) #37
Mouse	MODERN SPECIES	18	Mst1 (ENSMUSG00000032591)	Apeh (ENSMUSG00000032590)	Bsn (ENSMUSG00000032589) #9	Dag1 (ENSMUSG00000039952) #10	Nicn1 (ENSMUSG00000032606) #11	Amt (ENSMUSG00000032607) #12	Tcta (ENSMUSG00000039461) #13	Rhoa (ENSMUSG00000007815) #14	Gpx1 (ENSMUSG00000063856) #15	Usp4 (ENSMUSG00000032612) #16	1700102P08Rik (ENSMUSG00000032611) #17	Iho1 (ENSMUSG00000047220) #18	BC048562 (ENSMUSG00000050641) #19	Klhdc8b (ENSMUSG00000032609) #20	Ccdc71 (ENSMUSG00000049305) #21	Lamb2 (ENSMUSG00000052911) #22	Usp19 (ENSMUSG00000006676) #23	Qars (ENSMUSG00000032604) #24	Qrich1 (ENSMUSG00000006673) #25	Impdh2 (ENSMUSG00000062867) #26	Ndufaf3 (ENSMUSG00000070283) #27	Dalrd3 (ENSMUSG00000019039) #28	Wdr6 (ENSMUSG00000066357) #29	P4htm (ENSMUSG00000006675) #30	Arih2 (ENSMUSG00000064145) #31	Slc25a20 (ENSMUSG00000032602) #33	Prkar2a (ENSMUSG00000032601) #34	Ip6k2 (ENSMUSG00000032599) #35	Nckipsd (ENSMUSG00000032598) #36	Celsr3 (ENSMUSG00000023473) #37	Slc26a6 (ENSMUSG00000023259)
Ryukyu mouse	MODERN SPECIES	18	Mst1 (MGP_CAROLIEiJ_G0032676)	Apeh (MGP_CAROLIEiJ_G0032677)	Bsn (MGP_CAROLIEiJ_G0032678) #9	Dag1 (MGP_CAROLIEiJ_G0032679) #10	Nicn1 (MGP_CAROLIEiJ_G0032680) #11	Amt (MGP_CAROLIEiJ_G0032681) #12	Tcta (MGP_CAROLIEiJ_G0032682) #13	MGP_CAROLIEiJ_G0032683	MGP_CAROLIEiJ_G0032684 #15	Usp4 (MGP_CAROLIEiJ_G0032685) #16	1700102P08Rik (MGP_CAROLIEiJ_G0032686) #17	Iho1 (MGP_CAROLIEiJ_G0032687) #18	BC048562 (MGP_CAROLIEiJ_G0032688) #19	Klhdc8b (MGP_CAROLIEiJ_G0032689) #20	Ccdc71 (MGP_CAROLIEiJ_G0032690) #21	Lamb2 (MGP_CAROLIEiJ_G0032691) #22	MGP_CAROLIEiJ_G0032692	Qars (MGP_CAROLIEiJ_G0032693) #24	Qrich1 (MGP_CAROLIEiJ_G0032694) #25	Impdh2 (MGP_CAROLIEiJ_G0032695) #26	MGP_CAROLIEiJ_G0032696	Dalrd3 (MGP_CAROLIEiJ_G0032697) #28	Wdr6 (MGP_CAROLIEiJ_G0032698) #29	P4htm (MGP_CAROLIEiJ_G0032699) #30	Arih2 (MGP_CAROLIEiJ_G0032700) #31	Slc25a20 (MGP_CAROLIEiJ_G0032701) #33	Prkar2a (MGP_CAROLIEiJ_G0032702) #34	Ip6k2 (MGP_CAROLIEiJ_G0032703) #35	Nckipsd (MGP_CAROLIEiJ_G0032704) #36	Celsr3 (MGP_CAROLIEiJ_G0032705) #37	Slc26a6 (MGP_CAROLIEiJ_G0032706)
Shrew mouse	MODERN SPECIES	1	Mst1 (MGP_PahariEiJ_G0015544)	Apeh (MGP_PahariEiJ_G0015545)	Bsn (MGP_PahariEiJ_G0015546) #9	Dag1 (MGP_PahariEiJ_G0015547) #10	Nicn1 (MGP_PahariEiJ_G0015548) #11	Amt (MGP_PahariEiJ_G0015549) #12	MGP_PahariEiJ_G0015550 #13	Rhoa (MGP_PahariEiJ_G0015551) #14	MGP_PahariEiJ_G0015552 #15	Usp4 (MGP_PahariEiJ_G0015553) #16	1700102P08Rik (MGP_PahariEiJ_G0015554) #17	Iho1 (MGP_PahariEiJ_G0015555) #18	BC048562 (MGP_PahariEiJ_G0015556) #19	Klhdc8b (MGP_PahariEiJ_G0015557) #20	Ccdc71 (MGP_PahariEiJ_G0015558) #21	MGP_PahariEiJ_G0015559 #22	Usp19 (MGP_PahariEiJ_G0015560) #23	Qars (MGP_PahariEiJ_G0015561) #24	Qrich1 (MGP_PahariEiJ_G0015562) #25	Impdh2 (MGP_PahariEiJ_G0015563) #26	Ndufaf3 (MGP_PahariEiJ_G0015564) #27	Dalrd3 (MGP_PahariEiJ_G0015565) #28	Wdr6 (MGP_PahariEiJ_G0015566) #29	P4htm (MGP_PahariEiJ_G0015567) #30	Arih2 (MGP_PahariEiJ_G0015568) #31	Slc25a20 (MGP_PahariEiJ_G0015569) #33	Prkar2a (MGP_PahariEiJ_G0015570) #34	Ip6k2 (MGP_PahariEiJ_G0015571) #35	Nckipsd (MGP_PahariEiJ_G0015572) #36	Celsr3 (MGP_PahariEiJ_G0015573) #37	Slc26a6 (MGP_PahariEiJ_G0015574)
Rat	MODERN SPECIES	18	Rnf123 (ENSRNOG00000033378) #7	Mst1 (ENSRNOG00000019680)	Apeh (ENSRNOG00000029572)	Bsn (ENSRNOG00000030714) #9	Dag1 (ENSRNOG00000019400) #10	Nicn1 (ENSRNOG00000049083) #11	Amt (ENSRNOG00000050214) #12	Rhoa (ENSRNOG00000050519) #14	Gpx1 (ENSRNOG00000048812) #15	LOC498675 (ENSRNOG00000046155) #17	Usp4 (ENSRNOG00000054863) #16	Iho1 (ENSRNOG00000048919) #18	LOC680045 (ENSRNOG00000047468) #19	Klhdc8b (ENSRNOG00000047867) #20	Ccdc71 (ENSRNOG00000048718) #21	Lamb2 (ENSRNOG00000047768) #22	Usp19 (ENSRNOG00000049531) #23	Qars1 (ENSRNOG00000060912) #24	Qrich1 (ENSRNOG00000025071) #25	Impdh2 (ENSRNOG00000031965) #26	Ndufaf3 (ENSRNOG00000020068) #27	Dalrd3 (ENSRNOG00000020159) #28	Wdr6 (ENSRNOG00000020185) #29	P4htm (ENSRNOG00000020249) #30	Arih2 (ENSRNOG00000031827) #31	Slc25a20 (ENSRNOG00000020288) #33	Prkar2a (ENSRNOG00000020284) #34	Ip6k2 (ENSRNOG00000020361) #35	Nckipsd (ENSRNOG00000031816) #36	Celsr3 (ENSRNOG00000053889) #37	Slc26a6 (ENSRNOG00000020450)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1657	Mst1 (ENSNGAG00000012975)	Apeh (ENSNGAG00000017302)	Bsn (ENSNGAG00000021371) #9	Dag1 (ENSNGAG00000002651) #10	Nicn1 (ENSNGAG00000003280) #11	Amt (ENSNGAG00000004673) #12	Tcta (ENSNGAG00000005564) #13	Rhoa (ENSNGAG00000007854) #14	Gpx1 (ENSNGAG00000015216) #15	Usp4 (ENSNGAG00000016905) #16	1700102P08Rik (ENSNGAG00000006755) #17	Iho1 (ENSNGAG00000008202) #18	BC048562 (ENSNGAG00000009611) #19	Klhdc8b (ENSNGAG00000010343) #20	Ccdc71 (ENSNGAG00000010873) #21	Lamb2 (ENSNGAG00000013899) #22	Usp19 (ENSNGAG00000017354) #23	Qars (ENSNGAG00000019897) #24	Qrich1 (ENSNGAG00000000436) #25	Impdh2 (ENSNGAG00000001022) #26	Ndufaf3 (ENSNGAG00000001095) #27	Dalrd3 (ENSNGAG00000002570) #28	Wdr6 (ENSNGAG00000000962) #29	P4htm (ENSNGAG00000006218) #30	Arih2 (ENSNGAG00000013630) #31	Slc25a20 (ENSNGAG00000014160) #33	Prkar2a (ENSNGAG00000015534) #34	Ip6k2 (ENSNGAG00000017095) #35	ENSNGAG00000018381 #36	Celsr3 (ENSNGAG00000021190) #37	ENSNGAG00000017439
Lesser Egyptian jerboa	MODERN SPECIES	110	Mst1 (ENSJJAG00000023123)	Apeh (ENSJJAG00000020682)	Bsn (ENSJJAG00000013955) #9	Dag1 (ENSJJAG00000009842) #10	Nicn1 (ENSJJAG00000015944) #11	ENSJJAG00000005274 #12	Tcta (ENSJJAG00000015029) #13	ENSJJAG00000016295	Gpx1 (ENSJJAG00000005600) #15	Usp4 (ENSJJAG00000022821) #16	1700102P08Rik (ENSJJAG00000023977) #17	ENSJJAG00000016241 #18	BC048562 (ENSJJAG00000013435) #19	Klhdc8b (ENSJJAG00000012953) #20	Ccdc71 (ENSJJAG00000017724) #21	Lamb2 (ENSJJAG00000012896) #22	ENSJJAG00000003459	Usp19 (ENSJJAG00000018701) #23	Qars (ENSJJAG00000010985) #24	ENSJJAG00000003833 #25	ENSJJAG00000021596 #25	Impdh2 (ENSJJAG00000023299) #26	Ndufaf3 (ENSJJAG00000013949) #27	Dalrd3 (ENSJJAG00000020047) #28	Wdr6 (ENSJJAG00000018299) #29	P4htm (ENSJJAG00000013960) #30	Arih2 (ENSJJAG00000023246) #31	ENSJJAG00000012465 #34	Ip6k2 (ENSJJAG00000021908) #35	ENSJJAG00000007230 #36	Celsr3 (ENSJJAG00000021460) #37
Kangaroo rat	MODERN SPECIES	426	Amigo3 (ENSDORG00000027444)	Mst1 (ENSDORG00000007508)	Apeh (ENSDORG00000007506)	Bsn (ENSDORG00000007502) #9	Dag1 (ENSDORG00000026820) #10	Nicn1 (ENSDORG00000003385) #11	Amt (ENSDORG00000003384) #12	Tcta (ENSDORG00000003383) #13	ENSDORG00000025671 #14	Gpx1 (ENSDORG00000003381) #15	Usp4 (ENSDORG00000007948) #16	1700102P08Rik (ENSDORG00000007947) #17	BC048562 (ENSDORG00000024843) #19	Klhdc8b (ENSDORG00000027491) #20	Ccdc71 (ENSDORG00000007398) #21	Lamb2 (ENSDORG00000007397) #22	Usp19 (ENSDORG00000007395) #23	ENSDORG00000007392 #24	ENSDORG00000029720 #24	Qrich1 (ENSDORG00000004362) #25	Impdh2 (ENSDORG00000004361) #26	Ndufaf3 (ENSDORG00000004360) #27	Dalrd3 (ENSDORG00000000367) #28	Wdr6 (ENSDORG00000028656) #29	P4htm (ENSDORG00000000362) #30	ENSDORG00000026187 #31	Slc25a20 (ENSDORG00000010459) #33	Prkar2a (ENSDORG00000004663) #34	Ip6k2 (ENSDORG00000008962) #35	Nckipsd (ENSDORG00000008960) #36	ENSDORG00000026062 #36
Lagomorpha	ANCESTRAL SPECIES	11	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875.r #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Rabbit	MODERN SPECIES	20	ENSOCUG00000030741	MST1 (ENSOCUG00000004997)	APEH (ENSOCUG00000004990)	ENSOCUG00000030238 ##9	DAG1 (ENSOCUG00000003439) #10	AMT (ENSOCUG00000013310) #12	TCTA (ENSOCUG00000013319) #13	RHOA (ENSOCUG00000013323) #14	ENSOCUG00000005938 #15	USP4 (ENSOCUG00000005926) #16	C3orf62 (ENSOCUG00000032815) #17	IHO1 (ENSOCUG00000005910) #18	C3orf84 (ENSOCUG00000022446) #19	KLHDC8B (ENSOCUG00000017588) #20	CCDC71 (ENSOCUG00000017593) #21	LAMB2 (ENSOCUG00000005101) #22	USP19 (ENSOCUG00000005092) #23	QARS1 (ENSOCUG00000005082) #24	QRICH1 (ENSOCUG00000017728) #25	IMPDH2 (ENSOCUG00000017724) #26	NDUFAF3 (ENSOCUG00000017721) #27	DALRD3 (ENSOCUG00000017715) #28	WDR6 (ENSOCUG00000017712) #29	ENSOCUG00000021347	P4HTM (ENSOCUG00000017707) #30	ARIH2 (ENSOCUG00000017699) #31	ENSOCUG00000029040	SLC25A20 (ENSOCUG00000016420) #33	PRKAR2A (ENSOCUG00000012426) #34	IP6K2 (ENSOCUG00000012420) #35	CELSR3 (ENSOCUG00000025952) #37
Pika	MODERN SPECIES	6937																LAMB2 (ENSOPRG00000001102) #22	USP19 (ENSOPRG00000001062) #23
Tree shrew	MODERN SPECIES	4981									RHOA (ENSTBEG00000002417) #14	GPX1 (ENSTBEG00000001653) #15	USP4 (ENSTBEG00000008478) #16	C3orf62 (ENSTBEG00000007849) #17	ENSTBEG00000007701	IHO1 (ENSTBEG00000007145) #18	KLHDC8B (ENSTBEG00000006660) #20	LAMB2 (ENSTBEG00000004366) #22
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Eulipotyphla	ANCESTRAL SPECIES	5												ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30
Hedgehog	MODERN SPECIES	6722															CCDC71 (ENSEEUG00000004319) #21	LAMB2 (ENSEEUG00000003858) #22	USP19 (ENSEEUG00000003708) #23
Common shrew	MODERN SPECIES	5652												C3orf62 (ENSSARG00000000077) #17	ENSSARG00000000075	IHO1 (ENSSARG00000000073) #18	KLHDC8B (ENSSARG00000000071) #20	LAMB2 (ENSSARG00000000065) #22	USP19 (ENSSARG00000000064) #23	QARS1 (ENSSARG00000000062) #24	QRICH1 (ENSSARG00000000061) #25	IMPDH2 (ENSSARG00000000060) #26	NDUFAF3 (ENSSARG00000000059) #27	WDR6 (ENSSARG00000000058) #29	P4HTM (ENSSARG00000000054) #30
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.pb.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.pb.b #14	ENSGT00940000156150.l #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Ursus	ANCESTRAL SPECIES	5	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.pb.b #14	ENSGT00940000156150.l #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
American black bear	MODERN SPECIES	3810									ENSUAMG00000010043	GPX1 (ENSUAMG00000010044) #15	USP4 (ENSUAMG00000010047) #16	C3orf62 (ENSUAMG00000010049) #17	IHO1 (ENSUAMG00000010050) #18	C3orf84 (ENSUAMG00000010055) #19	KLHDC8B (ENSUAMG00000010057) #20	LAMB2 (ENSUAMG00000010060) #22	USP19 (ENSUAMG00000010064) #23	QARS1 (ENSUAMG00000010069) #24
Polar bear	MODERN SPECIES	255	APEH (ENSUMAG00000022664)	ENSUMAG00000022817 #9	DAG1 (ENSUMAG00000022818) #10	NICN1 (ENSUMAG00000022819) #11	AMT (ENSUMAG00000022820) #12	TCTA (ENSUMAG00000022824) #13	RHOA (ENSUMAG00000022826) #14	GPX1 (ENSUMAG00000022827) #15	ENSUMAG00000022834 #16	USP4 (ENSUMAG00000022843) #16	C3orf62 (ENSUMAG00000022863) #17	IHO1 (ENSUMAG00000022867) #18	C3orf84 (ENSUMAG00000022882) #19	KLHDC8B (ENSUMAG00000022885) #20	CCDC71 (ENSUMAG00000022889) #21	LAMB2 (ENSUMAG00000022957) #22	USP19 (ENSUMAG00000023181) #23	QARS1 (ENSUMAG00000023208) #24	QRICH1 (ENSUMAG00000023411) #25	IMPDH2 (ENSUMAG00000023416) #26	NDUFAF3 (ENSUMAG00000023429) #27	ENSUMAG00000023436 #28	WDR6 (ENSUMAG00000023456) #29	P4HTM (ENSUMAG00000023465) #30	ARIH2 (ENSUMAG00000023482) #31	SLC25A20 (ENSUMAG00000023485) #33	PRKAR2A (ENSUMAG00000000109) #34	IP6K2 (ENSUMAG00000000479) #35	NCKIPSD (ENSUMAG00000000487) #36	ENSUMAG00000000521	SLC26A6 (ENSUMAG00000000551)
Giant Panda	MODERN SPECIES	14	MST1 (ENSAMEG00000012393)	APEH (ENSAMEG00000012459)	BSN (ENSAMEG00000012523) #9	DAG1 (ENSAMEG00000024430) #10	NICN1 (ENSAMEG00000012544) #11	AMT (ENSAMEG00000012551) #12	ENSAMEG00000012580 #13	RHOA (ENSAMEG00000012584) #14	GPX1 (ENSAMEG00000012590) #15	USP4 (ENSAMEG00000012591) #16	C3orf62 (ENSAMEG00000012680) #17	IHO1 (ENSAMEG00000012682) #18	C3orf84 (ENSAMEG00000012687) #19	KLHDC8B (ENSAMEG00000030033) #20	CCDC71 (ENSAMEG00000020173) #21	LAMB2 (ENSAMEG00000012708) #22	USP19 (ENSAMEG00000012785) #23	QARS1 (ENSAMEG00000012838) #24	QRICH1 (ENSAMEG00000012907) #25	IMPDH2 (ENSAMEG00000012929) #26	NDUFAF3 (ENSAMEG00000012966) #27	DALRD3 (ENSAMEG00000012976) #28	WDR6 (ENSAMEG00000013002) #29	P4HTM (ENSAMEG00000026267) #30	ARIH2 (ENSAMEG00000013035) #31	SLC25A20 (ENSAMEG00000000469) #33	PRKAR2A (ENSAMEG00000000490) #34	IP6K2 (ENSAMEG00000000516) #35	NCKIPSD (ENSAMEG00000000528) #36	CELSR3 (ENSAMEG00000000572) #37	SLC26A6 (ENSAMEG00000000655)
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.pb.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Ferret	MODERN SPECIES	238	AMIGO3 (ENSMPUG00000019647)	MST1 (ENSMPUG00000013611)	APEH (ENSMPUG00000013722)	BSN (ENSMPUG00000013782) #9	DAG1 (ENSMPUG00000013807) #10	NICN1 (ENSMPUG00000013809) #11	AMT (ENSMPUG00000013810) #12	TCTA (ENSMPUG00000013838) #13	RHOA (ENSMPUG00000013840) #14	GPX1 (ENSMPUG00000013843) #15	USP4 (ENSMPUG00000013846) #16	IHO1 (ENSMPUG00000013850) #18	C3orf84 (ENSMPUG00000013861) #19	KLHDC8B (ENSMPUG00000013869) #20	CCDC71 (ENSMPUG00000019649) #21	LAMB2 (ENSMPUG00000013872) #22	USP19 (ENSMPUG00000014117) #23	QARS1 (ENSMPUG00000014198) #24	QRICH1 (ENSMPUG00000014264) #25	NDUFAF3 (ENSMPUG00000014271) #27	DALRD3 (ENSMPUG00000014288) #28	WDR6 (ENSMPUG00000014318) #29	ENSMPUG00000014321	ARIH2 (ENSMPUG00000014344) #31	SLC25A20 (ENSMPUG00000014350) #33	PRKAR2A (ENSMPUG00000014376) #34	IP6K2 (ENSMPUG00000014413) #35	NCKIPSD (ENSMPUG00000014415) #36	CELSR3 (ENSMPUG00000014422) #37	SLC26A6 (ENSMPUG00000014428)	UQCRC1 (ENSMPUG00000014540)
American mink	MODERN SPECIES	58	MST1 (ENSNVIG00000023761)	APEH (ENSNVIG00000023757)	BSN (ENSNVIG00000023756) #9	DAG1 (ENSNVIG00000023739) #10	NICN1 (ENSNVIG00000023731) #11	AMT (ENSNVIG00000023698) #12	TCTA (ENSNVIG00000023696) #13	ENSNVIG00000023695	GPX1 (ENSNVIG00000023693) #15	USP4 (ENSNVIG00000023683) #16	C3orf62 (ENSNVIG00000023679) #17	IHO1 (ENSNVIG00000023670) #18	C3orf84 (ENSNVIG00000023667) #19	KLHDC8B (ENSNVIG00000023665) #20	CCDC71 (ENSNVIG00000023664) #21	LAMB2 (ENSNVIG00000023651) #22	USP19 (ENSNVIG00000023521) #23	QARS1 (ENSNVIG00000023503) #24	QRICH1 (ENSNVIG00000023489) #25	IMPDH2 (ENSNVIG00000023475) #26	NDUFAF3 (ENSNVIG00000023469) #27	DALRD3 (ENSNVIG00000023465) #28	WDR6 (ENSNVIG00000023458) #29	ENSNVIG00000023456	P4HTM (ENSNVIG00000023452) #30	ARIH2 (ENSNVIG00000023449) #31	SLC25A20 (ENSNVIG00000023438) #33	PRKAR2A (ENSNVIG00000023416) #34	IP6K2 (ENSNVIG00000023408) #35	NCKIPSD (ENSNVIG00000023402) #36	CELSR3 (ENSNVIG00000023375) #37
Canidae	ANCESTRAL SPECIES		ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00910000147297	ENSGT00390000001505 #11	ENSGT00940000157524.a #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.ob #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000013951.db.a	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836.f #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000171658	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524.a #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.ob #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000013951.db.a	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836.e #34	ENSGT00940000154836.f #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Dingo	MODERN SPECIES	401	ENSCAFG00020021156	MST1 (ENSCAFG00020021150)	APEH (ENSCAFG00020021126)	BSN (ENSCAFG00020021112) #9	DAG1 (ENSCAFG00020021107) #10	NICN1 (ENSCAFG00020021102) #11	AMT (ENSCAFG00020021037) #12	TCTA (ENSCAFG00020021023) #13	ENSCAFG00020021020 #14	GPX1 (ENSCAFG00020021012) #15	USP4 (ENSCAFG00020021004) #16	C3orf62 (ENSCAFG00020021003) #17	IHO1 (ENSCAFG00020021001) #18	C3orf84 (ENSCAFG00020021000) #19	KLHDC8B (ENSCAFG00020020998) #20	LAMB2 (ENSCAFG00020020994) #22	USP19 (ENSCAFG00020020986) #23	QARS1 (ENSCAFG00020020980) #24	QRICH1 (ENSCAFG00020020975) #25	IMPDH2 (ENSCAFG00020020966) #26	NDUFAF3 (ENSCAFG00020020962) #27	DALRD3 (ENSCAFG00020020957) #28	ENSCAFG00020020950	WDR6 (ENSCAFG00020020949) #29	P4HTM (ENSCAFG00020020941) #30	ARIH2 (ENSCAFG00020020933) #31	SLC25A20 (ENSCAFG00020020928) #33	ENSCAFG00020020925 #34	ENSCAFG00020020785 #34	IP6K2 (ENSCAFG00020020778) #35	NCKIPSD (ENSCAFG00020020775) #36
Dog	MODERN SPECIES	12	RNF123 (ENSCAFG00845025247) #7	AMIGO3 (ENSCAFG00845025496)	MST1 (ENSCAFG00845025539)	APEH (ENSCAFG00845025730)	BSN (ENSCAFG00845025871) #9	DAG1 (ENSCAFG00845025980) #10	AMT (ENSCAFG00845026162) #12	TCTA (ENSCAFG00845026862) #13	RHOA (ENSCAFG00845026916) #14	GPX1 (ENSCAFG00845027003) #15	USP4 (ENSCAFG00845027080) #16	C3orf62 (ENSCAFG00845027263) #17	IHO1 (ENSCAFG00845027331) #18	C20H3orf84 (ENSCAFG00845027426) #19	KLHDC8B (ENSCAFG00845027453) #20	LAMB2 (ENSCAFG00845027640) #22	USP19 (ENSCAFG00845028360) #23	QARS1 (ENSCAFG00845029059) #24	QRICH1 (ENSCAFG00845029132) #25	IMPDH2 (ENSCAFG00845029196) #26	NDUFAF3 (ENSCAFG00845029303) #27	DALRD3 (ENSCAFG00845029364) #28	WDR6 (ENSCAFG00845029474) #29	ENSCAFG00845029540	P4HTM (ENSCAFG00845029561) #30	ARIH2 (ENSCAFG00845029611) #31	SLC25A20 (ENSCAFG00845029742) #33	PRKAR2A (ENSCAFG00845029914) #34	ENSCAFG00845030093	IP6K2 (ENSCAFG00845030115) #35	NCKIPSD (ENSCAFG00845030141) #36
Red fox	MODERN SPECIES	5	DAG1 (ENSVVUG00000029028) #10	ENSVVUG00000029029	ENSVVUG00000029030	NICN1 (ENSVVUG00000029031) #11	AMT (ENSVVUG00000029036) #12	TCTA (ENSVVUG00000029052) #13	RHOA (ENSVVUG00000029053) #14	GPX1 (ENSVVUG00000029054) #15	USP4 (ENSVVUG00000029055) #16	C3orf62 (ENSVVUG00000029056) #17	CCDC36 (ENSVVUG00000029057) #18	ENSVVUG00000029059	C3orf84 (ENSVVUG00000029060) #19	KLHDC8B (ENSVVUG00000029061) #20	CCDC71 (ENSVVUG00000029062) #21	LAMB2 (ENSVVUG00000029063) #22	USP19 (ENSVVUG00000029068) #23	QARS1 (ENSVVUG00000029158) #24	QRICH1 (ENSVVUG00000029220) #25	NDUFAF3 (ENSVVUG00000029274) #27	WDR6 (ENSVVUG00000029289) #29	ENSVVUG00000029294	P4HTM (ENSVVUG00000029297) #30	ARIH2 (ENSVVUG00000029314) #31	SLC25A20 (ENSVVUG00000029398) #33	PRKAR2A (ENSVVUG00000029410) #34	ENSVVUG00000029412	IP6K2 (ENSVVUG00000029413) #35	NCKIPSD (ENSVVUG00000029416) #36	CELSR3 (ENSVVUG00000029449) #37	SLC26A6 (ENSVVUG00000029593)
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645.h #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645.h #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
leopard	MODERN SPECIES	68	ENSPPRG00000015877	MST1 (ENSPPRG00000016583)	APEH (ENSPPRG00000019437)	BSN (ENSPPRG00000020826) #9	DAG1 (ENSPPRG00000022512) #10	ENSPPRG00000014445	NICN1 (ENSPPRG00000025013) #11	AMT (ENSPPRG00000024852) #12	TCTA (ENSPPRG00000024728) #13	RHOA (ENSPPRG00000024656) #14	ENSPPRG00000024456 #16	C3orf62 (ENSPPRG00000024416) #17	IHO1 (ENSPPRG00000024255) #18	C3orf84 (ENSPPRG00000024113) #19	KLHDC8B (ENSPPRG00000023840) #20	LAMB2 (ENSPPRG00000023171) #22	USP19 (ENSPPRG00000003739) #23	QARS1 (ENSPPRG00000005221) #24	ENSPPRG00000005505	QRICH1 (ENSPPRG00000005820) #25	IMPDH2 (ENSPPRG00000006003) #26	NDUFAF3 (ENSPPRG00000006073) #27	DALRD3 (ENSPPRG00000006675) #28	WDR6 (ENSPPRG00000007146) #29	ENSPPRG00000007287	P4HTM (ENSPPRG00000007613) #30	ARIH2 (ENSPPRG00000008113) #31	SLC25A20 (ENSPPRG00000008373) #33	PRKAR2A (ENSPPRG00000009071) #34	IP6K2 (ENSPPRG00000010669) #35	NCKIPSD (ENSPPRG00000011420) #36
Tiger	MODERN SPECIES	281	ENSPTIG00000019198 #7	ENSPTIG00000019163	MST1 (ENSPTIG00000019141)	APEH (ENSPTIG00000018977)	DAG1 (ENSPTIG00000018919) #10	NICN1 (ENSPTIG00000018906) #11	AMT (ENSPTIG00000018699) #12	TCTA (ENSPTIG00000018655) #13	RHOA (ENSPTIG00000018631) #14	GPX1 (ENSPTIG00000018624) #15	USP4 (ENSPTIG00000018516) #16	C3orf62 (ENSPTIG00000018499) #17	IHO1 (ENSPTIG00000018424) #18	C3orf84 (ENSPTIG00000018411) #19	KLHDC8B (ENSPTIG00000018386) #20	LAMB2 (ENSPTIG00000018293) #22	USP19 (ENSPTIG00000018061) #23	QARS1 (ENSPTIG00000017922) #24	QRICH1 (ENSPTIG00000017901) #25	IMPDH2 (ENSPTIG00000017887) #26	NDUFAF3 (ENSPTIG00000017874) #27	DALRD3 (ENSPTIG00000017798) #28	WDR6 (ENSPTIG00000017782) #29	P4HTM (ENSPTIG00000017764) #30	ARIH2 (ENSPTIG00000017747) #31	SLC25A20 (ENSPTIG00000017596) #33	PRKAR2A (ENSPTIG00000017551) #34	IP6K2 (ENSPTIG00000017531) #35	NCKIPSD (ENSPTIG00000017444) #36	CELSR3 (ENSPTIG00000017215) #37	SLC26A6 (ENSPTIG00000016768)
Cat	MODERN SPECIES	1	MST1 (ENSFCAG00000025772)	RNF123 (ENSFCAG00000028315) #7	BSN (ENSFCAG00000031387) #9	DAG1 (ENSFCAG00000043206) #10	NICN1 (ENSFCAG00000009857) #11	AMT (ENSFCAG00000042786) #12	TCTA (ENSFCAG00000025429) #13	RHOA (ENSFCAG00000027456) #14	GPX1 (ENSFCAG00000025038) #15	USP4 (ENSFCAG00000009853) #16	CA2H3orf62 (ENSFCAG00000025844) #17	IHO1 (ENSFCAG00000009850) #18	CA2H3orf84 (ENSFCAG00000023457) #19	KLHDC8B (ENSFCAG00000009849) #20	CCDC71 (ENSFCAG00000039529) #21	LAMB2 (ENSFCAG00000009848) #22	USP19 (ENSFCAG00000009847) #23	QARS1 (ENSFCAG00000009846) #24	QRICH1 (ENSFCAG00000009845) #25	IMPDH2 (ENSFCAG00000009844) #26	NDUFAF3 (ENSFCAG00000009843) #27	DALRD3 (ENSFCAG00000009842) #28	WDR6 (ENSFCAG00000029509) #29	P4HTM (ENSFCAG00000009840) #30	ARIH2 (ENSFCAG00000009839) #31	SLC25A20 (ENSFCAG00000029832) #33	PRKAR2A (ENSFCAG00000027410) #34	IP6K2 (ENSFCAG00000022063) #35	NCKIPSD (ENSFCAG00000024490) #36	CELSR3 (ENSFCAG00000002102) #37	SLC26A6 (ENSFCAG00000028307)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Equus	ANCESTRAL SPECIES	5	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000164003	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Horse	MODERN SPECIES	7	RNF123 (ENSECAG00000022815) #7	AMIGO3 (ENSECAG00000004865)	MST1 (ENSECAG00000021998)	APEH (ENSECAG00000012420)	BSN (ENSECAG00000008283) #9	ENSECAG00000058735	DAG1 (ENSECAG00000009665) #10	NICN1 (ENSECAG00000011269) #11	AMT (ENSECAG00000012159) #12	TCTA (ENSECAG00000017355) #13	RHOA (ENSECAG00000033791) #14	USP4 (ENSECAG00000018624) #16	IHO1 (ENSECAG00000057595) #18	CCDC71 (ENSECAG00000021792) #21	KLHDC8B (ENSECAG00000020454) #20	LAMB2 (ENSECAG00000021805) #22	USP19 (ENSECAG00000016554) #23	QARS1 (ENSECAG00000000809) #24	QRICH1 (ENSECAG00000042686) #25	NDUFAF3 (ENSECAG00000019013) #27	IMPDH2 (ENSECAG00000006885) #26	DALRD3 (ENSECAG00000020436) #28	WDR6 (ENSECAG00000023907) #29	P4HTM (ENSECAG00000003137) #30	ARIH2 (ENSECAG00000010851) #31	SLC25A20 (ENSECAG00000019650) #33	ENSECAG00000052282	ENSECAG00000046577	ENSECAG00000048651	PRKAR2A (ENSECAG00000027868) #34	ENSECAG00000055560
Donkey	MODERN SPECIES	13	MST1 (ENSEASG00005011602)	APEH (ENSEASG00005011529)	ENSEASG00005011498	BSN (ENSEASG00005011503) #9	DAG1 (ENSEASG00005011493) #10	NICN1 (ENSEASG00005011490) #11	AMT (ENSEASG00005011487) #12	TCTA (ENSEASG00005037396) #13	ENSEASG00005038337	GPX1 (ENSEASG00005036373) #15	USP4 (ENSEASG00005011232) #16	C3orf62 (ENSEASG00005023591) #17	IHO1 (ENSEASG00005027665) #18	KLHDC8B (ENSEASG00005011155) #20	CCDC71 (ENSEASG00005011154) #21	LAMB2 (ENSEASG00005010965) #22	USP19 (ENSEASG00005010828) #23	QARS1 (ENSEASG00005010497) #24	QRICH1 (ENSEASG00005010463) #25	IMPDH2 (ENSEASG00005010445) #26	NDUFAF3 (ENSEASG00005033606) #27	DALRD3 (ENSEASG00005010427) #28	WDR6 (ENSEASG00005010422) #29	P4HTM (ENSEASG00005010415) #30	ARIH2 (ENSEASG00005010381) #31	SLC25A20 (ENSEASG00005010354) #33	PRKAR2A (ENSEASG00005010299) #34	IP6K2 (ENSEASG00005010284) #35	NCKIPSD (ENSEASG00005010268) #36	CELSR3 (ENSEASG00005010210) #37	SLC26A6 (ENSEASG00005009823)
Chiroptera	ANCESTRAL SPECIES	19	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Megabat	MODERN SPECIES	19	AMIGO3 (ENSPVAG00000008760)	RNF123 (ENSPVAG00000008756) #7	MST1 (ENSPVAG00000008752)	APEH (ENSPVAG00000008750)	BSN (ENSPVAG00000008748) #9	DAG1 (ENSPVAG00000008746) #10	NICN1 (ENSPVAG00000008742) #11	AMT (ENSPVAG00000008741) #12	TCTA (ENSPVAG00000008739) #13	RHOA (ENSPVAG00000008738) #14	GPX1 (ENSPVAG00000008736) #15	USP4 (ENSPVAG00000008735) #16	C3orf62 (ENSPVAG00000008734) #17	IHO1 (ENSPVAG00000008733) #18	KLHDC8B (ENSPVAG00000008730) #20	LAMB2 (ENSPVAG00000008726) #22	USP19 (ENSPVAG00000008723) #23	QARS1 (ENSPVAG00000008720) #24	QRICH1 (ENSPVAG00000008718) #25	IMPDH2 (ENSPVAG00000008715) #26	NDUFAF3 (ENSPVAG00000008713) #27	DALRD3 (ENSPVAG00000008710) #28	WDR6 (ENSPVAG00000008708) #29	P4HTM (ENSPVAG00000008706) #30	ARIH2 (ENSPVAG00000008705) #31	ENSPVAG00000024251	SLC25A20 (ENSPVAG00000008703) #33	PRKAR2A (ENSPVAG00000008700) #34
Microchiroptera	ANCESTRAL SPECIES	16	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	8	APEH (ENSRFEG00010005691)	BSN (ENSRFEG00010005833) #9	DAG1 (ENSRFEG00010005869) #10	NICN1 (ENSRFEG00010005912) #11	AMT (ENSRFEG00010006159) #12	TCTA (ENSRFEG00010006341) #13	RHOA (ENSRFEG00010006365) #14	GPX1 (ENSRFEG00010006388) #15	USP4 (ENSRFEG00010006437) #16	C3orf62 (ENSRFEG00010006582) #17	IHO1 (ENSRFEG00010006606) #18	C3orf84 (ENSRFEG00010006639) #19	KLHDC8B (ENSRFEG00010006686) #20	CCDC71 (ENSRFEG00010006704) #21	ENSRFEG00010006748 #22	LAMB2 (ENSRFEG00010006962) #22	USP19 (ENSRFEG00010007084) #23	QARS1 (ENSRFEG00010007205) #24	QRICH1 (ENSRFEG00010007287) #25	IMPDH2 (ENSRFEG00010007338) #26	NDUFAF3 (ENSRFEG00010007493) #27	DALRD3 (ENSRFEG00010007609) #28	WDR6 (ENSRFEG00010008055) #29	P4HTM (ENSRFEG00010007933) #30	ARIH2 (ENSRFEG00010008090) #31	SLC25A20 (ENSRFEG00010008130) #33	PRKAR2A (ENSRFEG00010008201) #34	IP6K2 (ENSRFEG00010008244) #35	NCKIPSD (ENSRFEG00010008286) #36	CELSR3 (ENSRFEG00010008356) #37	SLC26A6 (ENSRFEG00010008546)
Greater horseshoe bat	MODERN SPECIES	8	MST1 (ENSRFEG00010005560)	APEH (ENSRFEG00010005691)	BSN (ENSRFEG00010005833) #9	DAG1 (ENSRFEG00010005869) #10	NICN1 (ENSRFEG00010005912) #11	AMT (ENSRFEG00010006159) #12	TCTA (ENSRFEG00010006341) #13	RHOA (ENSRFEG00010006365) #14	GPX1 (ENSRFEG00010006388) #15	USP4 (ENSRFEG00010006437) #16	C3orf62 (ENSRFEG00010006582) #17	IHO1 (ENSRFEG00010006606) #18	C3orf84 (ENSRFEG00010006639) #19	KLHDC8B (ENSRFEG00010006686) #20	CCDC71 (ENSRFEG00010006704) #21	ENSRFEG00010006748 #22	LAMB2 (ENSRFEG00010006962) #22	USP19 (ENSRFEG00010007084) #23	QARS1 (ENSRFEG00010007205) #24	QRICH1 (ENSRFEG00010007287) #25	IMPDH2 (ENSRFEG00010007338) #26	NDUFAF3 (ENSRFEG00010007493) #27	DALRD3 (ENSRFEG00010007609) #28	WDR6 (ENSRFEG00010008055) #29	P4HTM (ENSRFEG00010007933) #30	ARIH2 (ENSRFEG00010008090) #31	SLC25A20 (ENSRFEG00010008130) #33	PRKAR2A (ENSRFEG00010008201) #34	IP6K2 (ENSRFEG00010008244) #35	NCKIPSD (ENSRFEG00010008286) #36	CELSR3 (ENSRFEG00010008356) #37
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Suina	ANCESTRAL SPECIES	1	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Chacoan peccary	MODERN SPECIES	950	MST1 (ENSCWAG00000019054)	APEH (ENSCWAG00000018898)	BSN (ENSCWAG00000018840) #9	DAG1 (ENSCWAG00000018804) #10	NICN1 (ENSCWAG00000018764) #11	AMT (ENSCWAG00000018363) #12	TCTA (ENSCWAG00000018314) #13	RHOA (ENSCWAG00000018291) #14	GPX1 (ENSCWAG00000018272) #15	USP4 (ENSCWAG00000018178) #16	C3orf62 (ENSCWAG00000018125) #17	IHO1 (ENSCWAG00000018076) #18	C3orf84 (ENSCWAG00000018023) #19	KLHDC8B (ENSCWAG00000018001) #20	CCDC71 (ENSCWAG00000017986) #21	LAMB2 (ENSCWAG00000017876) #22	USP19 (ENSCWAG00000017460) #23	QARS1 (ENSCWAG00000017330) #24	QRICH1 (ENSCWAG00000017279) #25	IMPDH2 (ENSCWAG00000017226) #26	NDUFAF3 (ENSCWAG00000017192) #27	DALRD3 (ENSCWAG00000017109) #28	WDR6 (ENSCWAG00000017019) #29	P4HTM (ENSCWAG00000016965) #30	ARIH2 (ENSCWAG00000016937) #31	SLC25A20 (ENSCWAG00000016889) #33	ENSCWAG00000016877	PRKAR2A (ENSCWAG00000016735) #34	IP6K2 (ENSCWAG00000016706) #35	NCKIPSD (ENSCWAG00000016529) #36	CELSR3 (ENSCWAG00000016266) #37
Pig	MODERN SPECIES	4	MST1 (ENSSSCG00000011386)	APEH (ENSSSCG00000011385)	BSN (ENSSSCG00000011384) #9	DAG1 (ENSSSCG00000034357) #10	NICN1 (ENSSSCG00000031594) #11	AMT (ENSSSCG00000022975) #12	TCTA (ENSSSCG00000037459) #13	RHOA (ENSSSCG00000022080) #14	GPX1 (ENSSSCG00000060656) #15	USP4 (ENSSSCG00000011382) #16	C3orf62 (ENSSSCG00000056386) #17	IHO1 (ENSSSCG00000011376) #18	C3orf84 (ENSSSCG00000058399) #19	KLHDC8B (ENSSSCG00000011379) #20	CCDC71 (ENSSSCG00000011378) #21	LAMB2 (ENSSSCG00000011377) #22	USP19 (ENSSSCG00000011375) #23	QARS1 (ENSSSCG00000032031) #24	IMPDH2 (ENSSSCG00000011373) #26	NDUFAF3 (ENSSSCG00000011371) #27	DALRD3 (ENSSSCG00000011370) #28	WDR6 (ENSSSCG00000011369) #29	P4HTM (ENSSSCG00000011368) #30	ARIH2 (ENSSSCG00000011367) #31	SLC25A20 (ENSSSCG00000011366) #33	ENSSSCG00000045239	PRKAR2A (ENSSSCG00000011363) #34	IP6K2 (ENSSSCG00000040922) #35	NCKIPSD (ENSSSCG00000011364) #36	CELSR3 (ENSSSCG00000011360) #37	SLC26A6 (ENSSSCG00000011361)
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Camelidae	ANCESTRAL SPECIES	7	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Arabian camel	MODERN SPECIES	8	MST1 (ENSCDRG00005005862)	APEH (ENSCDRG00005005764)	BSN (ENSCDRG00005005743) #9	DAG1 (ENSCDRG00005005724) #10	NICN1 (ENSCDRG00005005671) #11	AMT (ENSCDRG00005005389) #12	TCTA (ENSCDRG00005005330) #13	RHOA (ENSCDRG00005005306) #14	ENSCDRG00005005290 #15	USP4 (ENSCDRG00005005199) #16	C3orf62 (ENSCDRG00005005169) #17	IHO1 (ENSCDRG00005005122) #18	C3orf84 (ENSCDRG00005005088) #19	KLHDC8B (ENSCDRG00005005058) #20	CCDC71 (ENSCDRG00005005037) #21	LAMB2 (ENSCDRG00005004573) #22	QARS1 (ENSCDRG00005004349) #24	QRICH1 (ENSCDRG00005004282) #25	IMPDH2 (ENSCDRG00005004218) #26	NDUFAF3 (ENSCDRG00005004181) #27	DALRD3 (ENSCDRG00005004060) #28	WDR6 (ENSCDRG00005003990) #29	P4HTM (ENSCDRG00005003922) #30	ARIH2 (ENSCDRG00005003826) #31	PRKAR2A (ENSCDRG00005003620) #34	IP6K2 (ENSCDRG00005003526) #35	NCKIPSD (ENSCDRG00005003450) #36	CELSR3 (ENSCDRG00005014606) #37	SLC26A6 (ENSCDRG00005013706)	TMEM89 (ENSCDRG00005013618)	UQCRC1 (ENSCDRG00005013459)
Alpaca	MODERN SPECIES	2220																ENSVPAG00000009668 #22	USP19 (ENSVPAG00000009667) #23	QARS1 (ENSVPAG00000009664) #24	QRICH1 (ENSVPAG00000009662) #25	ENSVPAG00000009661 #27	ENSVPAG00000009657 #29	ARIH2 (ENSVPAG00000009656) #31	ENSVPAG00000015469	SLC25A20 (ENSVPAG00000009655) #33
Artiodactyla_b	ANCESTRAL SPECIES	21	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Cetacea	ANCESTRAL SPECIES	7	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00990000203969.c.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00990000203969.c.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00990000203969.c.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726.g #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00390000009949	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00990000203969.c.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726.g #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00990000203969.c.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00860000135958	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726.g #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Narwhal	MODERN SPECIES	310	APEH (ENSMMNG00015013189)	BSN (ENSMMNG00015013162) #9	DAG1 (ENSMMNG00015013146) #10	ENSMMNG00015013133	NICN1 (ENSMMNG00015013108) #11	AMT (ENSMMNG00015013041) #12	TCTA (ENSMMNG00015012991) #13	RHOA (ENSMMNG00015012980) #14	GPX1 (ENSMMNG00015012971) #15	USP4 (ENSMMNG00015012950) #16	C3orf62 (ENSMMNG00015012883) #17	IHO1 (ENSMMNG00015012868) #18	C3orf84 (ENSMMNG00015012850) #19	KLHDC8B (ENSMMNG00015012828) #20	CCDC71 (ENSMMNG00015012816) #21	LAMB2 (ENSMMNG00015012783) #22	USP19 (ENSMMNG00015012611) #23	QARS1 (ENSMMNG00015012503) #24	QRICH1 (ENSMMNG00015012459) #25	IMPDH2 (ENSMMNG00015012428) #26	NDUFAF3 (ENSMMNG00015012388) #27	DALRD3 (ENSMMNG00015012304) #28	WDR6 (ENSMMNG00015012270) #29	P4HTM (ENSMMNG00015012237) #30	ARIH2 (ENSMMNG00015012181) #31	SLC25A20 (ENSMMNG00015012135) #33	PRKAR2A (ENSMMNG00015012091) #34	IP6K2 (ENSMMNG00015012063) #35	NCKIPSD (ENSMMNG00015012044) #36	CELSR3 (ENSMMNG00015011980) #37	SLC26A6 (ENSMMNG00015011867)
Beluga whale	MODERN SPECIES	28	APEH (ENSDLEG00000014933)	BSN (ENSDLEG00000015162) #9	DAG1 (ENSDLEG00000015214) #10	ENSDLEG00000015224	NICN1 (ENSDLEG00000015239) #11	AMT (ENSDLEG00000015323) #12	RHOA (ENSDLEG00000015960) #14	GPX1 (ENSDLEG00000015976) #15	USP4 (ENSDLEG00000016063) #16	CUNH3orf62 (ENSDLEG00000017307) #17	ENSDLEG00000017319	CCDC36 (ENSDLEG00000017335) #18	C3orf84 (ENSDLEG00000017359) #19	KLHDC8B (ENSDLEG00000017380) #20	CCDC71 (ENSDLEG00000017405) #21	LAMB2 (ENSDLEG00000017419) #22	USP19 (ENSDLEG00000017469) #23	QARS1 (ENSDLEG00000017603) #24	QRICH1 (ENSDLEG00000018099) #25	IMPDH2 (ENSDLEG00000018135) #26	NDUFAF3 (ENSDLEG00000018168) #27	DALRD3 (ENSDLEG00000018204) #28	WDR6 (ENSDLEG00000018228) #29	P4HTM (ENSDLEG00000018259) #30	ARIH2 (ENSDLEG00000018291) #31	ENSDLEG00000018315	SLC25A20 (ENSDLEG00000018329) #33	PRKAR2A (ENSDLEG00000018338) #34	IP6K2 (ENSDLEG00000018367) #35	NCKIPSD (ENSDLEG00000018395) #36	CELSR3 (ENSDLEG00000018506) #37
Vaquita	MODERN SPECIES	2	MST1 (ENSPSNG00000013285)	APEH (ENSPSNG00000013525)	BSN (ENSPSNG00000013663) #9	DAG1 (ENSPSNG00000013813) #10	ENSPSNG00000004157	NICN1 (ENSPSNG00000004182) #11	AMT (ENSPSNG00000004381) #12	TCTA (ENSPSNG00000004703) #13	RHOA (ENSPSNG00000004743) #14	GPX1 (ENSPSNG00000004763) #15	USP4 (ENSPSNG00000004797) #16	IHO1 (ENSPSNG00000004857) #18	C3orf84 (ENSPSNG00000004885) #19	KLHDC8B (ENSPSNG00000004916) #20	CCDC71 (ENSPSNG00000004946) #21	LAMB2 (ENSPSNG00000005009) #22	USP19 (ENSPSNG00000005218) #23	QARS1 (ENSPSNG00000005651) #24	QRICH1 (ENSPSNG00000005735) #25	ENSPSNG00000005779 #26	NDUFAF3 (ENSPSNG00000005911) #27	DALRD3 (ENSPSNG00000005963) #28	WDR6 (ENSPSNG00000006056) #29	P4HTM (ENSPSNG00000006122) #30	ARIH2 (ENSPSNG00000006175) #31	SLC25A20 (ENSPSNG00000006261) #33	PRKAR2A (ENSPSNG00000006412) #34	IP6K2 (ENSPSNG00000006547) #35	NCKIPSD (ENSPSNG00000006619) #36	CELSR3 (ENSPSNG00000006685) #37	SLC26A6 (ENSPSNG00000006903)
Dolphin	MODERN SPECIES	1494									RHOA (ENSTTRG00000017370) #14	GPX1 (ENSTTRG00000017369) #15	USP4 (ENSTTRG00000017365) #16	ENSTTRG00000017364 #17	IHO1 (ENSTTRG00000017363) #18	KLHDC8B (ENSTTRG00000017361) #20	CCDC71 (ENSTTRG00000017360) #21	LAMB2 (ENSTTRG00000017357) #22	USP19 (ENSTTRG00000017355) #23	QARS1 (ENSTTRG00000017352) #24	QRICH1 (ENSTTRG00000017351) #25	IMPDH2 (ENSTTRG00000017349) #26	NDUFAF3 (ENSTTRG00000017348) #27	DALRD3 (ENSTTRG00000017347) #28	WDR6 (ENSTTRG00000017346) #29	P4HTM (ENSTTRG00000017345) #30	ARIH2 (ENSTTRG00000017344) #31	ENSTTRG00000021379	SLC25A20 (ENSTTRG00000017343) #33	PRKAR2A (ENSTTRG00000017342) #34	IP6K2 (ENSTTRG00000017341) #35	NCKIPSD (ENSTTRG00000017340) #36	CELSR3 (ENSTTRG00000017338) #37
Sperm whale	MODERN SPECIES	880															CCDC71 (ENSPCTG00005014019) #21	LAMB2 (ENSPCTG00005014044) #22	USP19 (ENSPCTG00005014196) #23
Blue whale	MODERN SPECIES	2	BSN (ENSBMSG00010010989) #9	DAG1 (ENSBMSG00010010968) #10	ENSBMSG00010010960	NICN1 (ENSBMSG00010010937) #11	AMT (ENSBMSG00010010835) #12	TCTA (ENSBMSG00010010765) #13	RHOA (ENSBMSG00010010749) #14	ENSBMSG00010010726 #15	USP4 (ENSBMSG00010010655) #16	C3orf62 (ENSBMSG00010010582) #17	ENSBMSG00010010572	IHO1 (ENSBMSG00010010547) #18	C3orf84 (ENSBMSG00010010524) #19	KLHDC8B (ENSBMSG00010010507) #20	CCDC71 (ENSBMSG00010010496) #21	LAMB2 (ENSBMSG00010010468) #22	USP19 (ENSBMSG00010010311) #23	QARS1 (ENSBMSG00010010201) #24	QRICH1 (ENSBMSG00010010177) #25	IMPDH2 (ENSBMSG00010010156) #26	NDUFAF3 (ENSBMSG00010010129) #27	DALRD3 (ENSBMSG00010010094) #28	WDR6 (ENSBMSG00010010069) #29	P4HTM (ENSBMSG00010010026) #30	ARIH2 (ENSBMSG00010009985) #31	ENSBMSG00010009972	SLC25A20 (ENSBMSG00010009954) #33	PRKAR2A (ENSBMSG00010009907) #34	IP6K2 (ENSBMSG00010009894) #35	NCKIPSD (ENSBMSG00010009865) #36	CELSR3 (ENSBMSG00010009819) #37
Pecora	ANCESTRAL SPECIES	17	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Yarkand deer	MODERN SPECIES	16	APEH (ENSCHYG00000022817)	BSN (ENSCHYG00000022765) #9	DAG1 (ENSCHYG00000022724) #10	NICN1 (ENSCHYG00000022672) #11	AMT (ENSCHYG00000021143) #12	TCTA (ENSCHYG00000020985) #13	RHOA (ENSCHYG00000020943) #14	GPX1 (ENSCHYG00000020891) #15	USP4 (ENSCHYG00000020223) #16	C3orf62 (ENSCHYG00000020130) #17	ENSCHYG00000020109 #18	ENSCHYG00000020073	C3orf84 (ENSCHYG00000019991) #19	KLHDC8B (ENSCHYG00000019923) #20	CCDC71 (ENSCHYG00000019908) #21	LAMB2 (ENSCHYG00000018059) #22	USP19 (ENSCHYG00000017124) #23	QARS1 (ENSCHYG00000016793) #24	QRICH1 (ENSCHYG00000016705) #25	IMPDH2 (ENSCHYG00000016573) #26	NDUFAF3 (ENSCHYG00000016470) #27	DALRD3 (ENSCHYG00000016269) #28	WDR6 (ENSCHYG00000016106) #29	P4HTM (ENSCHYG00000015965) #30	ARIH2 (ENSCHYG00000015757) #31	ENSCHYG00000015710	SLC25A20 (ENSCHYG00000015575) #33	PRKAR2A (ENSCHYG00000015281) #34	IP6K2 (ENSCHYG00000015157) #35	NCKIPSD (ENSCHYG00000014934) #36	CELSR3 (ENSCHYG00000014491) #37
Percora_a	ANCESTRAL SPECIES	19	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT01030000235142.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Bovidae	ANCESTRAL SPECIES	19	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT01030000235142.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Bovinae	ANCESTRAL SPECIES	16	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
American bison	MODERN SPECIES	3218	MST1 (ENSBBBG00000014000)	APEH (ENSBBBG00000013989)	BSN (ENSBBBG00000013959) #9	ENSBBBG00000003033	NICN1 (ENSBBBG00000003031) #11	AMT (ENSBBBG00000003011) #12	TCTA (ENSBBBG00000008744) #13	RHOA (ENSBBBG00000013828) #14	GPX1 (ENSBBBG00000013819) #15	USP4 (ENSBBBG00000013809) #16	C3orf62 (ENSBBBG00000002946) #17	IHO1 (ENSBBBG00000013760) #18	C3orf84 (ENSBBBG00000013731) #19	KLHDC8B (ENSBBBG00000002923) #20	CCDC71 (ENSBBBG00000002918) #21	LAMB2 (ENSBBBG00000013717) #22	USP19 (ENSBBBG00000013677) #23	QARS1 (ENSBBBG00000002795) #24	QRICH1 (ENSBBBG00000013477) #25	IMPDH2 (ENSBBBG00000002761) #26	NDUFAF3 (ENSBBBG00000013435) #27	DALRD3 (ENSBBBG00000013423) #28	WDR6 (ENSBBBG00000013397) #29	P4HTM (ENSBBBG00000013372) #30	ARIH2 (ENSBBBG00000013331) #31	SLC25A20 (ENSBBBG00000013306) #33	PRKAR2A (ENSBBBG00000001622) #34	IP6K2 (ENSBBBG00000013273) #35	NCKIPSD (ENSBBBG00000013266) #36	CELSR3 (ENSBBBG00000001641) #37	SLC26A6 (ENSBBBG00000013214)
Bos	ANCESTRAL SPECIES	16	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT01100000263480.a.b.b.a.a.b.b.a.a.b	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Bos_b	ANCESTRAL SPECIES	17	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT01100000263480.a.b.b.a.a.b.b.a.a.b	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Cow	DUPLICATION
Cow	MODERN SPECIES	14	APEH (ENSBTAG00000011583)	BSN (ENSBTAG00000011581) #9	DAG1 (ENSBTAG00000011580) #10	NICN1 (ENSBTAG00000000387) #11	AMT (ENSBTAG00000002321) #12	TCTA (ENSBTAG00000022632) #13	RHOA (ENSBTAG00000004279) #14	GPX1 (ENSBTAG00000054195) #15	USP4 (ENSBTAG00000011899) #16	C22H3orf62 (ENSBTAG00000011894) #17	IHO1 (ENSBTAG00000009371) #18	C22H3orf84 (ENSBTAG00000000982) #19	KLHDC8B (ENSBTAG00000000981) #20	CCDC71 (ENSBTAG00000013932) #21	ENSBTAG00000055290 #22	LAMB2 (ENSBTAG00000022635) #22	USP19 (ENSBTAG00000018921) #23	QARS1 (ENSBTAG00000018928) #24	QRICH1 (ENSBTAG00000018924) #25	IMPDH2 (ENSBTAG00000031837) #26	NDUFAF3 (ENSBTAG00000018918) #27	DALRD3 (ENSBTAG00000018913) #28	WDR6 (ENSBTAG00000018910) #29	P4HTM (ENSBTAG00000005490) #30	ARIH2 (ENSBTAG00000005488) #31	SLC25A20 (ENSBTAG00000000191) #33	PRKAR2A (ENSBTAG00000014205) #34	IP6K2 (ENSBTAG00000021853) #35	NCKIPSD (ENSBTAG00000021850) #36	CELSR3 (ENSBTAG00000021846) #37	SLC26A6 (ENSBTAG00000038381)
Cow	MODERN SPECIES	14	MST1 (ENSBTAG00000011585)	APEH (ENSBTAG00000011583)	BSN (ENSBTAG00000011581) #9	DAG1 (ENSBTAG00000011580) #10	NICN1 (ENSBTAG00000000387) #11	AMT (ENSBTAG00000002321) #12	TCTA (ENSBTAG00000022632) #13	RHOA (ENSBTAG00000004279) #14	GPX1 (ENSBTAG00000054195) #15	USP4 (ENSBTAG00000011899) #16	C22H3orf62 (ENSBTAG00000011894) #17	IHO1 (ENSBTAG00000009371) #18	C22H3orf84 (ENSBTAG00000000982) #19	KLHDC8B (ENSBTAG00000000981) #20	CCDC71 (ENSBTAG00000013932) #21	ENSBTAG00000055290 #22	LAMB2 (ENSBTAG00000022635) #22	USP19 (ENSBTAG00000018921) #23	QARS1 (ENSBTAG00000018928) #24	QRICH1 (ENSBTAG00000018924) #25	IMPDH2 (ENSBTAG00000031837) #26	NDUFAF3 (ENSBTAG00000018918) #27	DALRD3 (ENSBTAG00000018913) #28	WDR6 (ENSBTAG00000018910) #29	P4HTM (ENSBTAG00000005490) #30	ARIH2 (ENSBTAG00000005488) #31	SLC25A20 (ENSBTAG00000000191) #33	PRKAR2A (ENSBTAG00000014205) #34	IP6K2 (ENSBTAG00000021853) #35	NCKIPSD (ENSBTAG00000021850) #36	CELSR3 (ENSBTAG00000021846) #37
Hybrid Bos Indicus	DUPLICATION
Hybrid Bos Indicus	MODERN SPECIES	14	APEH (ENSBIXG00005011475)	BSN (ENSBIXG00005011525) #9	DAG1 (ENSBIXG00005011549) #10	AMT (ENSBIXG00005011718) #12	TCTA (ENSBIXG00005007432) #13	ENSBIXG00005006787	RHOA (ENSBIXG00005011793) #14	GPX1 (ENSBIXG00005011815) #15	C3orf62 (ENSBIXG00005005956) #17	USP4 (ENSBIXG00005011888) #16	IHO1 (ENSBIXG00005011909) #18	C3orf84 (ENSBIXG00005001208) #19	KLHDC8B (ENSBIXG00005011961) #20	CCDC71 (ENSBIXG00005000414) #21	ENSBIXG00005002536 #22	LAMB2 (ENSBIXG00005016314) #22	USP19 (ENSBIXG00005017369) #23	QARS1 (ENSBIXG00005017449) #24	QRICH1 (ENSBIXG00005017495) #25	IMPDH2 (ENSBIXG00005002847) #26	NDUFAF3 (ENSBIXG00005002855) #27	DALRD3 (ENSBIXG00005017624) #28	P4HTM (ENSBIXG00005002875) #30	WDR6 (ENSBIXG00005017807) #29	ARIH2 (ENSBIXG00005002897) #31	ENSBIXG00005002903	ENSBIXG00005017902 #33	ENSBIXG00005017935	PRKAR2A (ENSBIXG00005018013) #34	IP6K2 (ENSBIXG00005018059) #35	NCKIPSD (ENSBIXG00005002932) #36
Hybrid Bos Indicus	MODERN SPECIES	14	MST1 (ENSBIXG00005011434)	APEH (ENSBIXG00005011475)	BSN (ENSBIXG00005011525) #9	DAG1 (ENSBIXG00005011549) #10	AMT (ENSBIXG00005011718) #12	TCTA (ENSBIXG00005007432) #13	ENSBIXG00005006787	RHOA (ENSBIXG00005011793) #14	GPX1 (ENSBIXG00005011815) #15	C3orf62 (ENSBIXG00005005956) #17	USP4 (ENSBIXG00005011888) #16	IHO1 (ENSBIXG00005011909) #18	C3orf84 (ENSBIXG00005001208) #19	KLHDC8B (ENSBIXG00005011961) #20	CCDC71 (ENSBIXG00005000414) #21	ENSBIXG00005002536 #22	LAMB2 (ENSBIXG00005016314) #22	USP19 (ENSBIXG00005017369) #23	QARS1 (ENSBIXG00005017449) #24	QRICH1 (ENSBIXG00005017495) #25	IMPDH2 (ENSBIXG00005002847) #26	NDUFAF3 (ENSBIXG00005002855) #27	DALRD3 (ENSBIXG00005017624) #28	P4HTM (ENSBIXG00005002875) #30	WDR6 (ENSBIXG00005017807) #29	ARIH2 (ENSBIXG00005002897) #31	ENSBIXG00005002903	ENSBIXG00005017902 #33	ENSBIXG00005017935	PRKAR2A (ENSBIXG00005018013) #34	IP6K2 (ENSBIXG00005018059) #35
Bos_a	ANCESTRAL SPECIES	9	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT01100000263480.a.b.b.a.a.b.b.a.a.b	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Domestic yak	MODERN SPECIES	14	DAG1 (ENSBGRG00000020861) #10	ENSBGRG00000020826	NICN1 (ENSBGRG00000020735) #11	AMT (ENSBGRG00000020243) #12	TCTA (ENSBGRG00000020134) #13	ENSBGRG00000020118	RHOA (ENSBGRG00000020019) #14	GPX1 (ENSBGRG00000019961) #15	USP4 (ENSBGRG00000019272) #16	C3orf62 (ENSBGRG00000019210) #17	ENSBGRG00000019151	C3orf84 (ENSBGRG00000019083) #19	KLHDC8B (ENSBGRG00000019038) #20	CCDC71 (ENSBGRG00000019022) #21	USP19 (ENSBGRG00000017987) #23	LAMB2 (ENSBGRG00000016632) #22	QARS1 (ENSBGRG00000015757) #24	QRICH1 (ENSBGRG00000015681) #25	IMPDH2 (ENSBGRG00000015395) #26	NDUFAF3 (ENSBGRG00000015330) #27	DALRD3 (ENSBGRG00000024128) #28	WDR6 (ENSBGRG00000024062) #29	P4HTM (ENSBGRG00000023980) #30	ARIH2 (ENSBGRG00000023826) #31	ENSBGRG00000023787	PRKAR2A (ENSBGRG00000023547) #34	IP6K2 (ENSBGRG00000023483) #35	NCKIPSD (ENSBGRG00000023323) #36	ENSBGRG00000023309 #37	SLC26A6 (ENSBGRG00000022432)	TMEM89 (ENSBGRG00000022364)
Wild yak	DUPLICATION
Wild yak	MODERN SPECIES	2401							RHOA (ENSBMUG00000014394) #14	GPX1 (ENSBMUG00000014390) #15	USP4 (ENSBMUG00000014366) #16	C3orf62 (ENSBMUG00000014327) #17	IHO1 (ENSBMUG00000014305) #18	C3orf84 (ENSBMUG00000014279) #19	KLHDC8B (ENSBMUG00000014264) #20	CCDC71 (ENSBMUG00000014262) #21	ENSBMUG00000014250 #22	LAMB2 (ENSBMUG00000014195) #22	USP19 (ENSBMUG00000014055) #23	QARS1 (ENSBMUG00000013897) #24	QRICH1 (ENSBMUG00000013833) #25	IMPDH2 (ENSBMUG00000013821) #26	NDUFAF3 (ENSBMUG00000013786) #27	DALRD3 (ENSBMUG00000013752) #28	WDR6 (ENSBMUG00000013729) #29	P4HTM (ENSBMUG00000013710) #30	ARIH2 (ENSBMUG00000013680) #31	SLC25A20 (ENSBMUG00000013606) #33	PRKAR2A (ENSBMUG00000013542) #34	IP6K2 (ENSBMUG00000013503) #35	NCKIPSD (ENSBMUG00000013484) #36	CELSR3 (ENSBMUG00000013264) #37	SLC26A6 (ENSBMUG00000012744)
Wild yak	MODERN SPECIES	2401								RHOA (ENSBMUG00000014394) #14	GPX1 (ENSBMUG00000014390) #15	USP4 (ENSBMUG00000014366) #16	C3orf62 (ENSBMUG00000014327) #17	IHO1 (ENSBMUG00000014305) #18	C3orf84 (ENSBMUG00000014279) #19	KLHDC8B (ENSBMUG00000014264) #20	CCDC71 (ENSBMUG00000014262) #21	ENSBMUG00000014250 #22	LAMB2 (ENSBMUG00000014195) #22	USP19 (ENSBMUG00000014055) #23	QARS1 (ENSBMUG00000013897) #24	QRICH1 (ENSBMUG00000013833) #25	IMPDH2 (ENSBMUG00000013821) #26	NDUFAF3 (ENSBMUG00000013786) #27	DALRD3 (ENSBMUG00000013752) #28	WDR6 (ENSBMUG00000013729) #29	P4HTM (ENSBMUG00000013710) #30	ARIH2 (ENSBMUG00000013680) #31	SLC25A20 (ENSBMUG00000013606) #33	PRKAR2A (ENSBMUG00000013542) #34	IP6K2 (ENSBMUG00000013503) #35	NCKIPSD (ENSBMUG00000013484) #36	CELSR3 (ENSBMUG00000013264) #37
Caprinae	ANCESTRAL SPECIES	15	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT01030000235142.a	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.jb #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37
Goat	MODERN SPECIES	14	APEH (ENSCHIG00000007324)	BSN (ENSCHIG00000015658) #9	DAG1 (ENSCHIG00000015784) #10	ENSCHIG00000009691	NICN1 (ENSCHIG00000010612) #11	AMT (ENSCHIG00000017556) #12	TCTA (ENSCHIG00000014306) #13	RHOA (ENSCHIG00000013894) #14	GPX1 (ENSCHIG00000017983) #15	USP4 (ENSCHIG00000017572) #16	C3orf62 (ENSCHIG00000009739) #17	IHO1 (ENSCHIG00000009674) #18	C3orf84 (ENSCHIG00000015744) #19	KLHDC8B (ENSCHIG00000022366) #20	CCDC71 (ENSCHIG00000012608) #21	LAMB2 (ENSCHIG00000015310) #22	USP19 (ENSCHIG00000019576) #23	QARS1 (ENSCHIG00000022953) #24	QRICH1 (ENSCHIG00000016705) #25	IMPDH2 (ENSCHIG00000011336) #26	ENSCHIG00000008827	NDUFAF3 (ENSCHIG00000022087) #27	DALRD3 (ENSCHIG00000018628) #28	WDR6 (ENSCHIG00000003628) #29	P4HTM (ENSCHIG00000013169) #30	ARIH2 (ENSCHIG00000027089) #31	SLC25A20 (ENSCHIG00000010462) #33	PRKAR2A (ENSCHIG00000023269) #34	IP6K2 (ENSCHIG00000016624) #35	NCKIPSD (ENSCHIG00000022149) #36	CELSR3 (ENSCHIG00000018245) #37
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	10	APEH (ENSOARG00020019834)	BSN (ENSOARG00020020014) #9	DAG1 (ENSOARG00020020102) #10	NICN1 (ENSOARG00020020154) #11	AMT (ENSOARG00020020285) #12	TCTA (ENSOARG00020020854) #13	RHOA (ENSOARG00020020892) #14	GPX1 (ENSOARG00020020922) #15	USP4 (ENSOARG00020020981) #16	C3orf62 (ENSOARG00020021187) #17	ENSOARG00020021222	C3orf84 (ENSOARG00020021267) #19	KLHDC8B (ENSOARG00020021328) #20	CCDC71 (ENSOARG00020021366) #21	ENSOARG00020021399 #22	LAMB2 (ENSOARG00020021611) #22	USP19 (ENSOARG00020021723) #23	QARS1 (ENSOARG00020022319) #24	QRICH1 (ENSOARG00020022369) #25	IMPDH2 (ENSOARG00020022397) #26	NDUFAF3 (ENSOARG00020022430) #27	DALRD3 (ENSOARG00020022500) #28	WDR6 (ENSOARG00020022626) #29	P4HTM (ENSOARG00020022705) #30	ARIH2 (ENSOARG00020022759) #31	SLC25A20 (ENSOARG00020022821) #33	PRKAR2A (ENSOARG00020022886) #34	IP6K2 (ENSOARG00020023052) #35	NCKIPSD (ENSOARG00020023097) #36	CELSR3 (ENSOARG00020023126) #37	SLC26A6 (ENSOARG00020023288)
Rambouillet Sheep	MODERN SPECIES	10	MST1 (ENSOARG00020019678)	APEH (ENSOARG00020019834)	BSN (ENSOARG00020020014) #9	DAG1 (ENSOARG00020020102) #10	NICN1 (ENSOARG00020020154) #11	AMT (ENSOARG00020020285) #12	TCTA (ENSOARG00020020854) #13	RHOA (ENSOARG00020020892) #14	GPX1 (ENSOARG00020020922) #15	USP4 (ENSOARG00020020981) #16	C3orf62 (ENSOARG00020021187) #17	ENSOARG00020021222	C3orf84 (ENSOARG00020021267) #19	KLHDC8B (ENSOARG00020021328) #20	CCDC71 (ENSOARG00020021366) #21	ENSOARG00020021399 #22	LAMB2 (ENSOARG00020021611) #22	USP19 (ENSOARG00020021723) #23	QARS1 (ENSOARG00020022319) #24	QRICH1 (ENSOARG00020022369) #25	IMPDH2 (ENSOARG00020022397) #26	NDUFAF3 (ENSOARG00020022430) #27	DALRD3 (ENSOARG00020022500) #28	WDR6 (ENSOARG00020022626) #29	P4HTM (ENSOARG00020022705) #30	ARIH2 (ENSOARG00020022759) #31	SLC25A20 (ENSOARG00020022821) #33	PRKAR2A (ENSOARG00020022886) #34	IP6K2 (ENSOARG00020023052) #35	NCKIPSD (ENSOARG00020023097) #36	CELSR3 (ENSOARG00020023126) #37
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1221	BSN (ENSMMSG00000017196) #9	DAG1 (ENSMMSG00000017160) #10	ENSMMSG00000017122	NICN1 (ENSMMSG00000017077) #11	AMT (ENSMMSG00000015660) #12	TCTA (ENSMMSG00000015587) #13	RHOA (ENSMMSG00000015567) #14	ENSMMSG00000015545 #15	USP4 (ENSMMSG00000015420) #16	C3orf62 (ENSMMSG00000015397) #17	IHO1 (ENSMMSG00000015321) #18	C3orf84 (ENSMMSG00000015293) #19	KLHDC8B (ENSMMSG00000015273) #20	CCDC71 (ENSMMSG00000015262) #21	ENSMMSG00000015241 #22	LAMB2 (ENSMMSG00000015126) #22	USP19 (ENSMMSG00000014237) #23	QARS1 (ENSMMSG00000014108) #24	QRICH1 (ENSMMSG00000014082) #25	IMPDH2 (ENSMMSG00000013996) #26	NDUFAF3 (ENSMMSG00000013945) #27	DALRD3 (ENSMMSG00000013900) #28	WDR6 (ENSMMSG00000013855) #29	P4HTM (ENSMMSG00000013832) #30	ARIH2 (ENSMMSG00000013782) #31	ENSMMSG00000013769	SLC25A20 (ENSMMSG00000023168) #33	ENSMMSG00000023164	ENSMMSG00000023160	ENSMMSG00000023156	PRKAR2A (ENSMMSG00000023137) #34
Siberian musk deer	MODERN SPECIES	1221	APEH (ENSMMSG00000017269)	BSN (ENSMMSG00000017196) #9	DAG1 (ENSMMSG00000017160) #10	ENSMMSG00000017122	NICN1 (ENSMMSG00000017077) #11	AMT (ENSMMSG00000015660) #12	TCTA (ENSMMSG00000015587) #13	RHOA (ENSMMSG00000015567) #14	ENSMMSG00000015545 #15	USP4 (ENSMMSG00000015420) #16	C3orf62 (ENSMMSG00000015397) #17	IHO1 (ENSMMSG00000015321) #18	C3orf84 (ENSMMSG00000015293) #19	KLHDC8B (ENSMMSG00000015273) #20	CCDC71 (ENSMMSG00000015262) #21	ENSMMSG00000015241 #22	LAMB2 (ENSMMSG00000015126) #22	USP19 (ENSMMSG00000014237) #23	QARS1 (ENSMMSG00000014108) #24	QRICH1 (ENSMMSG00000014082) #25	IMPDH2 (ENSMMSG00000013996) #26	NDUFAF3 (ENSMMSG00000013945) #27	DALRD3 (ENSMMSG00000013900) #28	WDR6 (ENSMMSG00000013855) #29	P4HTM (ENSMMSG00000013832) #30	ARIH2 (ENSMMSG00000013782) #31	ENSMMSG00000013769	SLC25A20 (ENSMMSG00000023168) #33	ENSMMSG00000023164	ENSMMSG00000023160	ENSMMSG00000023156
Atlantogenata	ANCESTRAL SPECIES	30	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000163656	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Afrotheria	ANCESTRAL SPECIES	29	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Afrotheria_a	ANCESTRAL SPECIES	30	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT00940000160077 #37	ENSGT01070000253775.a.d.a.b.b
Elephant	MODERN SPECIES	49	MST1 (ENSLAFG00000003505)	APEH (ENSLAFG00000003497)	BSN (ENSLAFG00000002847) #9	DAG1 (ENSLAFG00000011041) #10	NICN1 (ENSLAFG00000029153) #11	AMT (ENSLAFG00000009731) #12	TCTA (ENSLAFG00000009728) #13	RHOA (ENSLAFG00000009726) #14	GPX1 (ENSLAFG00000009724) #15	USP4 (ENSLAFG00000018507) #16	C3orf62 (ENSLAFG00000018504) #17	IHO1 (ENSLAFG00000018499) #18	C3orf84 (ENSLAFG00000027656) #19	KLHDC8B (ENSLAFG00000005090) #20	CCDC71 (ENSLAFG00000005096) #21	LAMB2 (ENSLAFG00000012871) #22	USP19 (ENSLAFG00000012851) #23	QARS1 (ENSLAFG00000012841) #24	QRICH1 (ENSLAFG00000012836) #25	IMPDH2 (ENSLAFG00000012829) #26	NDUFAF3 (ENSLAFG00000031083) #27	DALRD3 (ENSLAFG00000012826) #28	WDR6 (ENSLAFG00000012822) #29	P4HTM (ENSLAFG00000012817) #30	ARIH2 (ENSLAFG00000012809) #31	SLC25A20 (ENSLAFG00000000862) #33	PRKAR2A (ENSLAFG00000003894) #34	IP6K2 (ENSLAFG00000022060) #35	NCKIPSD (ENSLAFG00000020649) #36	CELSR3 (ENSLAFG00000004808) #37	ENSLAFG00000027768
Hyrax	MODERN SPECIES	5538														KLHDC8B (ENSPCAG00000012559) #20	CCDC71 (ENSPCAG00000012527) #21	LAMB2 (ENSPCAG00000012332) #22	USP19 (ENSPCAG00000012121) #23	ENSPCAG00000011911 #24
Tenrec	MODERN SPECIES	8755																ENSETEG00000017216 #22
Xenarthra	ANCESTRAL SPECIES		ENSGT00940000155781 #7	ENSGT00940000159461	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b #14	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36	ENSGT01070000253775.a.d.a.b.b	ENSGT00390000005336
Armadillo	MODERN SPECIES	864	AMIGO3 (ENSDNOG00000037102)	MST1 (ENSDNOG00000003406)	APEH (ENSDNOG00000031643)	BSN (ENSDNOG00000047457) #9	DAG1 (ENSDNOG00000016917) #10	NICN1 (ENSDNOG00000018341) #11	AMT (ENSDNOG00000002402) #12	TCTA (ENSDNOG00000002400) #13	RHOA (ENSDNOG00000046934) #14	USP4 (ENSDNOG00000012797) #16	C3orf62 (ENSDNOG00000019586) #17	IHO1 (ENSDNOG00000013880) #18	C3orf84 (ENSDNOG00000043752) #19	KLHDC8B (ENSDNOG00000032781) #20	ENSDNOG00000044903 #21	ENSDNOG00000000033 #22	ENSDNOG00000031599	QARS1 (ENSDNOG00000014157) #24	QRICH1 (ENSDNOG00000014130) #25	IMPDH2 (ENSDNOG00000014105) #26	NDUFAF3 (ENSDNOG00000014096) #27	DALRD3 (ENSDNOG00000041605) #28	WDR6 (ENSDNOG00000033276) #29	P4HTM (ENSDNOG00000014050) #30	ARIH2 (ENSDNOG00000032223) #31	SLC25A20 (ENSDNOG00000000976) #33	ENSDNOG00000034621	PRKAR2A (ENSDNOG00000010826) #34	IP6K2 (ENSDNOG00000010809) #35	NCKIPSD (ENSDNOG00000025438) #36	SLC26A6 (ENSDNOG00000032436)
Marsupialia	ANCESTRAL SPECIES	14	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.e.a #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000166951	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Opossum	DUPLICATION
Opossum	MODERN SPECIES	5	APEH (ENSMODG00000012954)	BSN (ENSMODG00000012965) #9	DAG1 (ENSMODG00000012968) #10	NICN1 (ENSMODG00000022968) #11	AMT (ENSMODG00000012973) #12	TCTA (ENSMODG00000012978) #13	RHOA (ENSMODG00000042763) #14	GPX1 (ENSMODG00000012984) #15	USP4 (ENSMODG00000013001) #16	C3orf62 (ENSMODG00000013005) #17	ENSMODG00000043050 #18	ENSMODG00000013014 #19	KLHDC8B (ENSMODG00000013022) #20	ENSMODG00000013027	ENSMODG00000039230 #22	LAMB2 (ENSMODG00000013288) #22	USP19 (ENSMODG00000013305) #23	ENSMODG00000013310	QARS1 (ENSMODG00000013321) #24	QRICH1 (ENSMODG00000013333) #25	IMPDH2 (ENSMODG00000013354) #26	NDUFAF3 (ENSMODG00000022966) #27	DALRD3 (ENSMODG00000013362) #28	ENSMODG00000013296 #29	ENSMODG00000043990	P4HTM (ENSMODG00000013366) #30	ARIH2 (ENSMODG00000013374) #31	ENSMODG00000013383 #33	PRKAR2A (ENSMODG00000013392) #34	IP6K2 (ENSMODG00000013401) #35	NCKIPSD (ENSMODG00000013410) #36
Opossum	MODERN SPECIES	5	MST1 (ENSMODG00000012944)	APEH (ENSMODG00000012954)	BSN (ENSMODG00000012965) #9	DAG1 (ENSMODG00000012968) #10	NICN1 (ENSMODG00000022968) #11	AMT (ENSMODG00000012973) #12	TCTA (ENSMODG00000012978) #13	RHOA (ENSMODG00000042763) #14	GPX1 (ENSMODG00000012984) #15	USP4 (ENSMODG00000013001) #16	C3orf62 (ENSMODG00000013005) #17	ENSMODG00000043050 #18	ENSMODG00000013014 #19	KLHDC8B (ENSMODG00000013022) #20	ENSMODG00000013027	ENSMODG00000039230 #22	LAMB2 (ENSMODG00000013288) #22	USP19 (ENSMODG00000013305) #23	ENSMODG00000013310	QARS1 (ENSMODG00000013321) #24	QRICH1 (ENSMODG00000013333) #25	IMPDH2 (ENSMODG00000013354) #26	NDUFAF3 (ENSMODG00000022966) #27	DALRD3 (ENSMODG00000013362) #28	ENSMODG00000013296 #29	ENSMODG00000043990	P4HTM (ENSMODG00000013366) #30	ARIH2 (ENSMODG00000013374) #31	ENSMODG00000013383 #33	PRKAR2A (ENSMODG00000013392) #34	IP6K2 (ENSMODG00000013401) #35
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.e.a #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000166951	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Diprotodontia	ANCESTRAL SPECIES	12	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.e.a #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000166951	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
Wallaby	MODERN SPECIES	8084																LAMB2 (ENSMEUG00000010600) #22
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT00390000013172	ENSGT00620000087961.a.b.a.a.a.b.f #9	ENSGT00390000008429 #10	ENSGT00390000001505 #11	ENSGT00940000157524 #12	ENSGT00390000004490 #13	ENSGT00950000182945.b.b.e.a #14	ENSGT00940000156150 #15	ENSGT00940000156645 #16	ENSGT00390000000252 #17	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000166951	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00940000156310 #35	ENSGT00390000015725 #36
koala	DUPLICATION
koala	MODERN SPECIES	75	RNF123 (ENSPCIG00000021575) #7	MST1 (ENSPCIG00000021592)	APEH (ENSPCIG00000021665)	DAG1 (ENSPCIG00000021945) #10	NICN1 (ENSPCIG00000011868) #11	AMT (ENSPCIG00000011871) #12	TCTA (ENSPCIG00000033201) #13	ENSPCIG00000011878 #14	GPX1 (ENSPCIG00000011881) #15	USP4 (ENSPCIG00000011972) #16	C3orf62 (ENSPCIG00000018125) #17	ENSPCIG00000018126 #18	ENSPCIG00000018127 #19	KLHDC8B (ENSPCIG00000018128) #20	ENSPCIG00000018130 #22	LAMB2 (ENSPCIG00000018185) #22	USP19 (ENSPCIG00000018723) #23	ENSPCIG00000018725	QARS1 (ENSPCIG00000018726) #24	QRICH1 (ENSPCIG00000018727) #25	ENSPCIG00000018761 #26	NDUFAF3 (ENSPCIG00000022141) #27	DALRD3 (ENSPCIG00000022151) #28	ENSPCIG00000022163 #29	ENSPCIG00000022172	P4HTM (ENSPCIG00000034973) #30	ARIH2 (ENSPCIG00000022175) #31	SLC25A20 (ENSPCIG00000022183) #33	PRKAR2A (ENSPCIG00000022186) #34	IP6K2 (ENSPCIG00000022187) #35	NCKIPSD (ENSPCIG00000022191) #36
koala	MODERN SPECIES	75	AMIGO3 (ENSPCIG00000021572)	RNF123 (ENSPCIG00000021575) #7	MST1 (ENSPCIG00000021592)	APEH (ENSPCIG00000021665)	DAG1 (ENSPCIG00000021945) #10	NICN1 (ENSPCIG00000011868) #11	AMT (ENSPCIG00000011871) #12	TCTA (ENSPCIG00000033201) #13	ENSPCIG00000011878 #14	GPX1 (ENSPCIG00000011881) #15	USP4 (ENSPCIG00000011972) #16	C3orf62 (ENSPCIG00000018125) #17	ENSPCIG00000018126 #18	ENSPCIG00000018127 #19	KLHDC8B (ENSPCIG00000018128) #20	ENSPCIG00000018130 #22	LAMB2 (ENSPCIG00000018185) #22	USP19 (ENSPCIG00000018723) #23	ENSPCIG00000018725	QARS1 (ENSPCIG00000018726) #24	QRICH1 (ENSPCIG00000018727) #25	ENSPCIG00000018761 #26	NDUFAF3 (ENSPCIG00000022141) #27	DALRD3 (ENSPCIG00000022151) #28	ENSPCIG00000022163 #29	ENSPCIG00000022172	P4HTM (ENSPCIG00000034973) #30	ARIH2 (ENSPCIG00000022175) #31	SLC25A20 (ENSPCIG00000022183) #33	PRKAR2A (ENSPCIG00000022186) #34	IP6K2 (ENSPCIG00000022187) #35
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	179																LAMB2 (ENSVURG00010015330) #22	USP19 (ENSVURG00010015483) #23
Common wonbat	MODERN SPECIES	1056	MST1 (ENSVURG00010018107)	APEH (ENSVURG00010018119)	BSN (ENSVURG00010018149) #9	DAG1 (ENSVURG00010018158) #10	NICN1 (ENSVURG00010018161) #11	AMT (ENSVURG00010018166) #12	TCTA (ENSVURG00010018195) #13	ENSVURG00010018206 #14	GPX1 (ENSVURG00010018210) #15	USP4 (ENSVURG00010018217) #16	C3orf62 (ENSVURG00010018240) #17	ENSVURG00010018249 #18	KLHDC8B (ENSVURG00010018258) #20	ENSVURG00010018269	ENSVURG00010018280 #21	ENSVURG00010018298 #22	ENSVURG00010018344	QARS1 (ENSVURG00010018357) #24	QRICH1 (ENSVURG00010018382) #25	IMPDH2 (ENSVURG00010018392) #26	NDUFAF3 (ENSVURG00010018404) #27	DALRD3 (ENSVURG00010018421) #28	ENSVURG00010018436 #29	ENSVURG00010018443	P4HTM (ENSVURG00010018449) #30	SLC25A20 (ENSVURG00010018452) #33	PRKAR2A (ENSVURG00010018461) #34	IP6K2 (ENSVURG00010018463) #35	NCKIPSD (ENSVURG00010018472) #36	ENSVURG00010018484 #37	SLC26A6 (ENSVURG00010018489)
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES		DAG1 (ENSSHAG00000016867) #10	NICN1 (ENSSHAG00000031377) #11	AMT (ENSSHAG00000016474) #12	TCTA (ENSSHAG00000020820) #13	ENSSHAG00000016308 #14	GPX1 (ENSSHAG00000031759) #15	USP4 (ENSSHAG00000016024) #16	C3orf62 (ENSSHAG00000029899) #17	ENSSHAG00000015747 #18	ENSSHAG00000024380 #19	KLHDC8B (ENSSHAG00000027422) #20	ENSSHAG00000015577	ENSSHAG00000028406 #21	ENSSHAG00000030662 #22	USP19 (ENSSHAG00000015212) #23	LAMB2 (ENSSHAG00000015322) #22	ENSSHAG00000031850	QRICH1 (ENSSHAG00000023020) #25	QARS1 (ENSSHAG00000015068) #24	IMPDH2 (ENSSHAG00000022188) #26	NDUFAF3 (ENSSHAG00000014794) #27	DALRD3 (ENSSHAG00000024349) #28	ENSSHAG00000014674 #29	ENSSHAG00000025091	ARIH2 (ENSSHAG00000014344) #31	SLC25A20 (ENSSHAG00000029717) #33	PRKAR2A (ENSSHAG00000023624) #34	IP6K2 (ENSSHAG00000012845) #35	CELSR3 (ENSSHAG00000012387) #37	SLC26A6 (ENSSHAG00000012116)	ENSSHAG00000031602
Tasmanian devil	MODERN SPECIES		BSN (ENSSHAG00000020766) #9	ENSSHAG00000021948	DAG1 (ENSSHAG00000016867) #10	NICN1 (ENSSHAG00000031377) #11	AMT (ENSSHAG00000016474) #12	TCTA (ENSSHAG00000020820) #13	ENSSHAG00000016308 #14	GPX1 (ENSSHAG00000031759) #15	USP4 (ENSSHAG00000016024) #16	C3orf62 (ENSSHAG00000029899) #17	ENSSHAG00000015747 #18	ENSSHAG00000024380 #19	KLHDC8B (ENSSHAG00000027422) #20	ENSSHAG00000015577	ENSSHAG00000028406 #21	ENSSHAG00000030662 #22	USP19 (ENSSHAG00000015212) #23	LAMB2 (ENSSHAG00000015322) #22	ENSSHAG00000031850	QRICH1 (ENSSHAG00000023020) #25	QARS1 (ENSSHAG00000015068) #24	IMPDH2 (ENSSHAG00000022188) #26	NDUFAF3 (ENSSHAG00000014794) #27	DALRD3 (ENSSHAG00000024349) #28	ENSSHAG00000014674 #29	ENSSHAG00000025091	ARIH2 (ENSSHAG00000014344) #31	SLC25A20 (ENSSHAG00000029717) #33	PRKAR2A (ENSSHAG00000023624) #34	IP6K2 (ENSSHAG00000012845) #35	CELSR3 (ENSSHAG00000012387) #37
Platypus	DUPLICATION
Platypus	MODERN SPECIES	84	TADA3 (ENSOANG00000012084)	ARPC4 (ENSOANG00000012083)	ENSOANG00000012082	ENSOANG00000012081	CIDEC (ENSOANG00000041209)	JAGN1 (ENSOANG00000041559)	IL17RE (ENSOANG00000004459)	IL17RC (ENSOANG00000010509)	CRELD1 (ENSOANG00000004057)	ENSOANG00000042375	ENSOANG00000042177	KLHDC8B (ENSOANG00000013712) #20	ENSOANG00000012254	ENSOANG00000008128 #21	ENSOANG00000046400 #22	LAMB2 (ENSOANG00000004144) #22	USP19 (ENSOANG00000002437) #23	ENSOANG00000036939	ENSOANG00000015022	QARS1 (ENSOANG00000014118) #24	QRICH1 (ENSOANG00000010904) #25	IMPDH2 (ENSOANG00000010907) #26	NDUFAF3 (ENSOANG00000010908) #27	DALRD3 (ENSOANG00000010909) #28	ENSOANG00000010910 #29	P4HTM (ENSOANG00000048877) #30	ARIH2 (ENSOANG00000041696) #31	SLC25A20 (ENSOANG00000007566) #33	PRKAR2A (ENSOANG00000020926) #34	IP6K2 (ENSOANG00000001845) #35	NCKIPSD (ENSOANG00000001846) #36
Platypus	MODERN SPECIES	84	CAMK1 (ENSOANG00000012085)	TADA3 (ENSOANG00000012084)	ARPC4 (ENSOANG00000012083)	ENSOANG00000012082	ENSOANG00000012081	CIDEC (ENSOANG00000041209)	JAGN1 (ENSOANG00000041559)	IL17RE (ENSOANG00000004459)	IL17RC (ENSOANG00000010509)	CRELD1 (ENSOANG00000004057)	ENSOANG00000042375	ENSOANG00000042177	KLHDC8B (ENSOANG00000013712) #20	ENSOANG00000012254	ENSOANG00000008128 #21	ENSOANG00000046400 #22	LAMB2 (ENSOANG00000004144) #22	USP19 (ENSOANG00000002437) #23	ENSOANG00000036939	ENSOANG00000015022	QARS1 (ENSOANG00000014118) #24	QRICH1 (ENSOANG00000010904) #25	IMPDH2 (ENSOANG00000010907) #26	NDUFAF3 (ENSOANG00000010908) #27	DALRD3 (ENSOANG00000010909) #28	ENSOANG00000010910 #29	P4HTM (ENSOANG00000048877) #30	ARIH2 (ENSOANG00000041696) #31	SLC25A20 (ENSOANG00000007566) #33	PRKAR2A (ENSOANG00000020926) #34	IP6K2 (ENSOANG00000001845) #35
Sauria	ANCESTRAL SPECIES	13	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203
Archelosauria	ANCESTRAL SPECIES	17	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00510000048121
Testudinoidea	DUPLICATION
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060.eb #22	ENSGT00940000156060.db.a #22	ENSGT00940000159085 #23	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00510000048121
Testudinidae	ANCESTRAL SPECIES	73	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060.eb #22	ENSGT00940000156060.db.a #22
Goode s thornscrub tortoise	MODERN SPECIES	21	OGG1 (ENSGEVG00005010941)	CAMK1 (ENSGEVG00005010904)	TADA3 (ENSGEVG00005010880)	ARPC4 (ENSGEVG00005010846)	ENSGEVG00005010805	TTLL3 (ENSGEVG00005010625)	RPUSD3 (ENSGEVG00005010561)	JAGN1 (ENSGEVG00005010538)	ENSGEVG00005010509	ENSGEVG00005010477	CRELD1 (ENSGEVG00005010448)	PRRT3 (ENSGEVG00005010395)	KLHDC8B (ENSGEVG00005010358) #20	CCDC71 (ENSGEVG00005010338) #21	ENSGEVG00005009975 #22	ENSGEVG00005009835 #22	ENSGEVG00005009770 #23	ENSGEVG00005009738	ENSGEVG00005009670 #22	ENSGEVG00005009358 #23	ENSGEVG00005009048	QARS1 (ENSGEVG00005008899) #24	QRICH1 (ENSGEVG00005008845) #25	IMPDH2 (ENSGEVG00005008788) #26	NDUFAF3 (ENSGEVG00005008759) #27	DALRD3 (ENSGEVG00005008702) #28	WDR6 (ENSGEVG00005008674) #29	ENSGEVG00005008651	P4HTM (ENSGEVG00005008597) #30	ARIH2 (ENSGEVG00005008565) #31	SLC25A20 (ENSGEVG00005008545) #33
Abingdon island giant tortoise	MODERN SPECIES	258											CRELD1 (ENSCABG00000022534)	PRRT3 (ENSCABG00000022531)	IHO1 (ENSCABG00000022528) #18	KLHDC8B (ENSCABG00000022527) #20	ENSCABG00000022516 #22	ENSCABG00000022508 #22	SLC35F1 (ENSCABG00000022505)
Emydidae	ANCESTRAL SPECIES																	ENSGT00940000156060.db.a #22
Three-toed box turtle	MODERN SPECIES	1882																ENSTMTG00000019638 #22
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000156060.db.b #22
Emydidae	ANCESTRAL SPECIES	13	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060.eb #22	ENSGT00940000156060.db.b #22	ENSGT00940000159085 #23	ENSGT01050000244841.A.b.b.b	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00510000048121
painted turtle	MODERN SPECIES	847	TADA3 (ENSCPBG00000008847)	ARPC4 (ENSCPBG00000008842)	TTLL3 (ENSCPBG00000008831)	RPUSD3 (ENSCPBG00000008825)	JAGN1 (ENSCPBG00000008821)	ENSCPBG00000008818	IL17RC (ENSCPBG00000008800)	ENSCPBG00000008794	CRELD1 (ENSCPBG00000008789)	PRRT3 (ENSCPBG00000008778)	IHO1 (ENSCPBG00000008768) #18	KLHDC8B (ENSCPBG00000008754) #20	ENSCPBG00000008746	CCDC71 (ENSCPBG00000008741) #21	ENSCPBG00000008727 #22	LAMB2 (ENSCPBG00000008695) #22	USP19 (ENSCPBG00000008674) #23	ENSCPBG00000008654	ENSCPBG00000008650	QARS1 (ENSCPBG00000008614) #24	QRICH1 (ENSCPBG00000008585) #25	IMPDH2 (ENSCPBG00000004204) #26	NDUFAF3 (ENSCPBG00000004053) #27	DALRD3 (ENSCPBG00000004002) #28	WDR6 (ENSCPBG00000003992) #29	P4HTM (ENSCPBG00000003969) #30	ENSCPBG00000003958	ARIH2 (ENSCPBG00000003938) #31	SLC25A20 (ENSCPBG00000003921) #33	PRKAR2A (ENSCPBG00000003911) #34	HTD2 (ENSCPBG00000003897)
Testudinidae	ANCESTRAL SPECIES	5																ENSGT00940000156060.db.b #22	ENSGT00940000159085 #23	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00510000048121
Goode s thornscrub tortoise	MODERN SPECIES	21	ARPC4 (ENSGEVG00005010846)	ENSGEVG00005010805	TTLL3 (ENSGEVG00005010625)	RPUSD3 (ENSGEVG00005010561)	JAGN1 (ENSGEVG00005010538)	ENSGEVG00005010509	ENSGEVG00005010477	CRELD1 (ENSGEVG00005010448)	PRRT3 (ENSGEVG00005010395)	KLHDC8B (ENSGEVG00005010358) #20	CCDC71 (ENSGEVG00005010338) #21	ENSGEVG00005009975 #22	ENSGEVG00005009835 #22	ENSGEVG00005009770 #23	ENSGEVG00005009738	ENSGEVG00005009670 #22	ENSGEVG00005009358 #23	ENSGEVG00005009048	QARS1 (ENSGEVG00005008899) #24	QRICH1 (ENSGEVG00005008845) #25	IMPDH2 (ENSGEVG00005008788) #26	NDUFAF3 (ENSGEVG00005008759) #27	DALRD3 (ENSGEVG00005008702) #28	WDR6 (ENSGEVG00005008674) #29	ENSGEVG00005008651	P4HTM (ENSGEVG00005008597) #30	ARIH2 (ENSGEVG00005008565) #31	SLC25A20 (ENSGEVG00005008545) #33	PRKAR2A (ENSGEVG00005008524) #34	RPP14 (ENSGEVG00005008471)	HTD2 (ENSGEVG00005008441)
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060.eb #22	ENSGT00940000156060.db.a #22	ENSGT00940000159085 #23	ENSGT00950000185305	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Testudinidae	ANCESTRAL SPECIES	73	ENSGT00940000157794	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060.eb #22	ENSGT00940000156060.db.a #22
Goode s thornscrub tortoise	MODERN SPECIES	21	BRPF1 (ENSGEVG00005010967)	OGG1 (ENSGEVG00005010941)	CAMK1 (ENSGEVG00005010904)	TADA3 (ENSGEVG00005010880)	ARPC4 (ENSGEVG00005010846)	ENSGEVG00005010805	TTLL3 (ENSGEVG00005010625)	RPUSD3 (ENSGEVG00005010561)	JAGN1 (ENSGEVG00005010538)	ENSGEVG00005010509	ENSGEVG00005010477	CRELD1 (ENSGEVG00005010448)	PRRT3 (ENSGEVG00005010395)	KLHDC8B (ENSGEVG00005010358) #20	CCDC71 (ENSGEVG00005010338) #21	ENSGEVG00005009975 #22	ENSGEVG00005009835 #22	ENSGEVG00005009770 #23	ENSGEVG00005009738	ENSGEVG00005009670 #22	ENSGEVG00005009358 #23	ENSGEVG00005009048	QARS1 (ENSGEVG00005008899) #24	QRICH1 (ENSGEVG00005008845) #25	IMPDH2 (ENSGEVG00005008788) #26	NDUFAF3 (ENSGEVG00005008759) #27	DALRD3 (ENSGEVG00005008702) #28	WDR6 (ENSGEVG00005008674) #29	ENSGEVG00005008651	P4HTM (ENSGEVG00005008597) #30	ARIH2 (ENSGEVG00005008565) #31
Abingdon island giant tortoise	MODERN SPECIES	258												CRELD1 (ENSCABG00000022534)	PRRT3 (ENSCABG00000022531)	IHO1 (ENSCABG00000022528) #18	KLHDC8B (ENSCABG00000022527) #20	ENSCABG00000022516 #22	ENSCABG00000022508 #22	SLC35F1 (ENSCABG00000022505)
Emydidae	ANCESTRAL SPECIES	13	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060.eb #22	ENSGT00940000156060.db.b #22	ENSGT00940000159085 #23	ENSGT01050000244841.A.b.b.b	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
painted turtle	MODERN SPECIES	847	CAMK1 (ENSCPBG00000008861)	TADA3 (ENSCPBG00000008847)	ARPC4 (ENSCPBG00000008842)	TTLL3 (ENSCPBG00000008831)	RPUSD3 (ENSCPBG00000008825)	JAGN1 (ENSCPBG00000008821)	ENSCPBG00000008818	IL17RC (ENSCPBG00000008800)	ENSCPBG00000008794	CRELD1 (ENSCPBG00000008789)	PRRT3 (ENSCPBG00000008778)	IHO1 (ENSCPBG00000008768) #18	KLHDC8B (ENSCPBG00000008754) #20	ENSCPBG00000008746	CCDC71 (ENSCPBG00000008741) #21	ENSCPBG00000008727 #22	LAMB2 (ENSCPBG00000008695) #22	USP19 (ENSCPBG00000008674) #23	ENSCPBG00000008654	ENSCPBG00000008650	QARS1 (ENSCPBG00000008614) #24	QRICH1 (ENSCPBG00000008585) #25	IMPDH2 (ENSCPBG00000004204) #26	NDUFAF3 (ENSCPBG00000004053) #27	DALRD3 (ENSCPBG00000004002) #28	WDR6 (ENSCPBG00000003992) #29	P4HTM (ENSCPBG00000003969) #30	ENSCPBG00000003958	ARIH2 (ENSCPBG00000003938) #31	SLC25A20 (ENSCPBG00000003921) #33	PRKAR2A (ENSCPBG00000003911) #34
Archosauria	ANCESTRAL SPECIES	24	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Aves	ANCESTRAL SPECIES	29	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Neognathae	ANCESTRAL SPECIES	27	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Neognathae_b	ANCESTRAL SPECIES	18	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Neognathae_c	ANCESTRAL SPECIES	21	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00910000146976	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Kakapo	MODERN SPECIES	3	OGG1 (ENSSHBG00005010686)	CAMK1 (ENSSHBG00005010646)	TADA3 (ENSSHBG00005010597)	ENSSHBG00005010558	RPUSD3 (ENSSHBG00005010534)	JAGN1 (ENSSHBG00005000972)	ENSSHBG00005000970	ENSSHBG00005000969	ENSSHBG00005018060	CRELD1 (ENSSHBG00005018057)	PRRT3 (ENSSHBG00005018053)	ENSSHBG00005018050	KLHDC8B (ENSSHBG00005018042) #20	ENSSHBG00005018034	CCDC71 (ENSSHBG00005018032) #21	LAMB2 (ENSSHBG00005017487) #22	USP19 (ENSSHBG00005016544) #23	ENSSHBG00005016461	ENSSHBG00005016456	QARS1 (ENSSHBG00005016441) #24	QRICH1 (ENSSHBG00005016422) #25	ENSSHBG00005016413	IMPDH2 (ENSSHBG00005016402) #26	NDUFAF3 (ENSSHBG00005016388) #27	DALRD3 (ENSSHBG00005016365) #28	WDR6 (ENSSHBG00005016352) #29	ENSSHBG00005016345	P4HTM (ENSSHBG00005016338) #30	ARIH2 (ENSSHBG00005016333) #31	SLC25A20 (ENSSHBG00005016329) #33	PRKAR2A (ENSSHBG00005016314) #34
Golden eagle	DUPLICATION
Golden eagle	MODERN SPECIES	12	OGG1 (ENSACCG00020010217)	CAMK1 (ENSACCG00020010247)	TADA3 (ENSACCG00020010271)	ARPC4 (ENSACCG00020010285)	TTLL3 (ENSACCG00020010308)	RPUSD3 (ENSACCG00020010325)	JAGN1 (ENSACCG00020010336)	IL17RE (ENSACCG00020010363)	IL17RC (ENSACCG00020010397)	CRELD1 (ENSACCG00020010416)	PRRT3 (ENSACCG00020010432)	ENSACCG00020010449 #18	KLHDC8B (ENSACCG00020010458) #20	ENSACCG00020010479	CCDC71 (ENSACCG00020010491) #21	LAMB2 (ENSACCG00020010517) #22	ENSACCG00020010613 #22	USP19 (ENSACCG00020011256) #23	ENSACCG00020011898	ENSACCG00020011936	QARS1 (ENSACCG00020011978) #24	QRICH1 (ENSACCG00020012022) #25	IMPDH2 (ENSACCG00020012264) #26	NDUFAF3 (ENSACCG00020012422) #27	DALRD3 (ENSACCG00020012461) #28	ENSACCG00020012507 #29	P4HTM (ENSACCG00020012539) #30	ENSACCG00020012568	ARIH2 (ENSACCG00020012611) #31	SLC25A20 (ENSACCG00020012666) #33	PRKAR2A (ENSACCG00020012703) #34
Golden eagle	MODERN SPECIES	12	CAMK1 (ENSACCG00020010247)	TADA3 (ENSACCG00020010271)	ARPC4 (ENSACCG00020010285)	TTLL3 (ENSACCG00020010308)	RPUSD3 (ENSACCG00020010325)	JAGN1 (ENSACCG00020010336)	IL17RE (ENSACCG00020010363)	IL17RC (ENSACCG00020010397)	CRELD1 (ENSACCG00020010416)	PRRT3 (ENSACCG00020010432)	ENSACCG00020010449 #18	KLHDC8B (ENSACCG00020010458) #20	ENSACCG00020010479	CCDC71 (ENSACCG00020010491) #21	LAMB2 (ENSACCG00020010517) #22	ENSACCG00020010613 #22	USP19 (ENSACCG00020011256) #23	ENSACCG00020011898	ENSACCG00020011936	QARS1 (ENSACCG00020011978) #24	QRICH1 (ENSACCG00020012022) #25	IMPDH2 (ENSACCG00020012264) #26	NDUFAF3 (ENSACCG00020012422) #27	DALRD3 (ENSACCG00020012461) #28	ENSACCG00020012507 #29	P4HTM (ENSACCG00020012539) #30	ENSACCG00020012568	ARIH2 (ENSACCG00020012611) #31	SLC25A20 (ENSACCG00020012666) #33	PRKAR2A (ENSACCG00020012703) #34	RPP14 (ENSACCG00020012728)
Passeriformes	ANCESTRAL SPECIES	16	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857.j	ENSGT00940000154857.i.b	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Passeriformes_d	ANCESTRAL SPECIES	16	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857.i.b	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Flycatcher	MODERN SPECIES	3	OGG1 (ENSFALG00000026178)	CAMK1 (ENSFALG00000012913)	TADA3 (ENSFALG00000012939)	ENSFALG00000023767	ENSFALG00000012953	TTLL3 (ENSFALG00000012960)	RPUSD3 (ENSFALG00000012968)	JAGN1 (ENSFALG00000012972)	ENSFALG00000028141	ENSFALG00000012990	CRELD1 (ENSFALG00000026600)	IHO1 (ENSFALG00000023288) #18	KLHDC8B (ENSFALG00000013023) #20	ENSFALG00000013026	CCDC71 (ENSFALG00000014492) #21	LAMB2 (ENSFALG00000013029) #22	USP19 (ENSFALG00000013039) #23	ENSFALG00000013056	ENSFALG00000013060	QARS1 (ENSFALG00000013066) #24	QRICH1 (ENSFALG00000013074) #25	IMPDH2 (ENSFALG00000013079) #26	ENSFALG00000023042 #27	DALRD3 (ENSFALG00000023740) #28	ENSFALG00000023573 #29	P4HTM (ENSFALG00000013097) #30	ENSFALG00000013102	ARIH2 (ENSFALG00000013114) #31	SLC25A20 (ENSFALG00000013123) #33	PRKAR2A (ENSFALG00000023232) #34	RPP14 (ENSFALG00000013148)
Passeriformes_g	ANCESTRAL SPECIES	16	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857.i.b	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Medium ground finch	MODERN SPECIES	20	SETD5 (ENSGFOG00000008643)	LHFPL4 (ENSGFOG00000008631)	MTMR14 (ENSGFOG00000007348)	CPNE9 (ENSGFOG00000007031)	BRPF1 (ENSGFOG00000006985)	OGG1 (ENSGFOG00000006977)	CAMK1 (ENSGFOG00000006965)	TADA3 (ENSGFOG00000006954)	ARPC4 (ENSGFOG00000006945)	ENSGFOG00000006935	JAGN1 (ENSGFOG00000006928)	RPUSD3 (ENSGFOG00000006920)	CRELD1 (ENSGFOG00000006912)	KLHDC8B (ENSGFOG00000006902) #20	CCDC71 (ENSGFOG00000006897) #21	LAMB2 (ENSGFOG00000006844) #22	ENSGFOG00000006836	USP19 (ENSGFOG00000006826) #23	ENSGFOG00000006795	ENSGFOG00000006779	QARS1 (ENSGFOG00000006763) #24	QRICH1 (ENSGFOG00000006755) #25	ENSGFOG00000006750	IMPDH2 (ENSGFOG00000006492) #26	DALRD3 (ENSGFOG00000006460) #28	ENSGFOG00000006457 #29	P4HTM (ENSGFOG00000006438) #30	ENSGFOG00000006429	ARIH2 (ENSGFOG00000006421) #31	SLC25A20 (ENSGFOG00000006408) #33	PRKAR2A (ENSGFOG00000006375) #34
Passeroidea	ANCESTRAL SPECIES	16	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00940000154857.j	ENSGT00940000154857.i.b	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Zebra finch	MODERN SPECIES	3	OGG1 (ENSTGUG00000008637)	CAMK1 (ENSTGUG00000008649)	TADA3 (ENSTGUG00000008689)	ENSTGUG00000026741	ENSTGUG00000025146	RPUSD3 (ENSTGUG00000008744)	JAGN1 (ENSTGUG00000008751)	IL17RE (ENSTGUG00000024502)	IL17RC (ENSTGUG00000008756)	CRELD1 (ENSTGUG00000008758)	PRRT3 (ENSTGUG00000026207)	IHO1 (ENSTGUG00000020796) #18	KLHDC8B (ENSTGUG00000008764) #20	ENSTGUG00000025627	CCDC71 (ENSTGUG00000008773) #21	LAMB2 (ENSTGUG00000008776) #22	USP19 (ENSTGUG00000008834) #23	ENSTGUG00000008855	ENSTGUG00000021227	QARS1 (ENSTGUG00000008887) #24	QRICH1 (ENSTGUG00000008954) #25	IMPDH2 (ENSTGUG00000008980) #26	DALRD3 (ENSTGUG00000009024) #28	NDUFAF3 (ENSTGUG00000009019) #27	WDR6 (ENSTGUG00000009040) #29	ENSTGUG00000009077	P4HTM (ENSTGUG00000009060) #30	ARIH2 (ENSTGUG00000009080) #31	SLC25A20 (ENSTGUG00000009104) #33	PRKAR2A (ENSTGUG00000009123) #34	ENSTGUG00000009157
Common canary	MODERN SPECIES	15	CPNE9 (ENSSCAG00000005223)	BRPF1 (ENSSCAG00000005459)	ENSSCAG00000005462	CAMK1 (ENSSCAG00000005466)	ARPC4 (ENSSCAG00000005470)	TADA3 (ENSSCAG00000005474)	ENSSCAG00000005478	ENSSCAG00000005480	JAGN1 (ENSSCAG00000005482)	ENSSCAG00000005485	ENSSCAG00000005492	CRELD1 (ENSSCAG00000005499)	KLHDC8B (ENSSCAG00000005507) #20	ENSSCAG00000005516	CCDC71 (ENSSCAG00000005519) #21	LAMB2 (ENSSCAG00000005543) #22	ENSSCAG00000005702	USP19 (ENSSCAG00000005708) #23	ENSSCAG00000005722	ENSSCAG00000005728	ENSSCAG00000005732 #24	QARS1 (ENSSCAG00000005740) #24	QRICH1 (ENSSCAG00000005766) #25	IMPDH2 (ENSSCAG00000005775) #26	ENSSCAG00000005785	NDUFAF3 (ENSSCAG00000005786) #27	DALRD3 (ENSSCAG00000005791) #28	P4HTM (ENSSCAG00000005804) #30	ENSSCAG00000005857 #29	ENSSCAG00000005861	ARIH2 (ENSSCAG00000005865) #31
Great tit	DUPLICATION
Great tit	MODERN SPECIES	3	TADA3 (ENSPMJG00000004841)	ARPC4 (ENSPMJG00000004843)	ENSPMJG00000004848	ENSPMJG00000004853	RPUSD3 (ENSPMJG00000004855)	JAGN1 (ENSPMJG00000004856)	IL17RE (ENSPMJG00000004860)	IL17RC (ENSPMJG00000004865)	CRELD1 (ENSPMJG00000004868)	PRRT3 (ENSPMJG00000004869)	IHO1 (ENSPMJG00000004872) #18	KLHDC8B (ENSPMJG00000004874) #20	ENSPMJG00000004875	CCDC71 (ENSPMJG00000004876) #21	ENSPMJG00000004878 #22	LAMB2 (ENSPMJG00000004892) #22	USP19 (ENSPMJG00000004902) #23	ENSPMJG00000004905	QARS1 (ENSPMJG00000004906) #24	QRICH1 (ENSPMJG00000004915) #25	IMPDH2 (ENSPMJG00000004917) #26	ENSPMJG00000004920	NDUFAF3 (ENSPMJG00000004921) #27	DALRD3 (ENSPMJG00000004925) #28	ENSPMJG00000004927 #29	P4HTM (ENSPMJG00000004932) #30	ENSPMJG00000004934	ARIH2 (ENSPMJG00000004935) #31	SLC25A20 (ENSPMJG00000004945) #33	PRKAR2A (ENSPMJG00000004949) #34	HTD2 (ENSPMJG00000004951)
Great tit	MODERN SPECIES	3	CAMK1 (ENSPMJG00000004837)	TADA3 (ENSPMJG00000004841)	ARPC4 (ENSPMJG00000004843)	ENSPMJG00000004848	ENSPMJG00000004853	RPUSD3 (ENSPMJG00000004855)	JAGN1 (ENSPMJG00000004856)	IL17RE (ENSPMJG00000004860)	IL17RC (ENSPMJG00000004865)	CRELD1 (ENSPMJG00000004868)	PRRT3 (ENSPMJG00000004869)	IHO1 (ENSPMJG00000004872) #18	KLHDC8B (ENSPMJG00000004874) #20	ENSPMJG00000004875	CCDC71 (ENSPMJG00000004876) #21	ENSPMJG00000004878 #22	LAMB2 (ENSPMJG00000004892) #22	USP19 (ENSPMJG00000004902) #23	ENSPMJG00000004905	QARS1 (ENSPMJG00000004906) #24	QRICH1 (ENSPMJG00000004915) #25	IMPDH2 (ENSPMJG00000004917) #26	ENSPMJG00000004920	NDUFAF3 (ENSPMJG00000004921) #27	DALRD3 (ENSPMJG00000004925) #28	ENSPMJG00000004927 #29	P4HTM (ENSPMJG00000004932) #30	ENSPMJG00000004934	ARIH2 (ENSPMJG00000004935) #31	SLC25A20 (ENSPMJG00000004945) #33	PRKAR2A (ENSPMJG00000004949) #34
Galloanserae	ANCESTRAL SPECIES	26	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421.b	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00950000185305	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Anatidae	ANCESTRAL SPECIES	41									ENSGT00940000161421.b	ENSGT00730000111286	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00950000185305	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Duck	MODERN SPECIES	4	LSM3 (ENSAPLG00000014499)	SLC6A6 (ENSAPLG00000011407)	GRIP2 (ENSAPLG00000010553)	CCDC174 (ENSAPLG00000010346)	ENSAPLG00000010242	PLXNB1 (ENSAPLG00000008562)	ENSAPLG00000022004	SETD5 (ENSAPLG00000007096)	LHFPL4 (ENSAPLG00000019972)	ENSAPLG00000028999	MTMR14 (ENSAPLG00000006428)	IHO1 (ENSAPLG00000016107) #18	KLHDC8B (ENSAPLG00000019922) #20	ENSAPLG00000030196	ENSAPLG00000029637 #21	LAMB2 (ENSAPLG00000008249) #22	USP19 (ENSAPLG00000007654) #23	ENSAPLG00000030026	ENSAPLG00000030295	QARS1 (ENSAPLG00000007248) #24	QRICH1 (ENSAPLG00000007130) #25	IMPDH2 (ENSAPLG00000006986) #26	NDUFAF3 (ENSAPLG00000024636) #27	DALRD3 (ENSAPLG00000006918) #28	WDR6 (ENSAPLG00000025697) #29	ENSAPLG00000006785	P4HTM (ENSAPLG00000006841) #30	ARIH2 (ENSAPLG00000006502) #31	SLC25A20 (ENSAPLG00000029472) #33	PRKAR2A (ENSAPLG00000006277) #34	RPP14 (ENSAPLG00000006272)
Pink-footed goose	MODERN SPECIES	91										IL17RE (ENSABRG00000017585)	IL17RC (ENSABRG00000017595)	PRRT3 (ENSABRG00000017604)	IHO1 (ENSABRG00000017607) #18	KLHDC8B (ENSABRG00000017609) #20	CCDC71 (ENSABRG00000017612) #21	LAMB2 (ENSABRG00000017620) #22	USP19 (ENSABRG00000017644) #23	ENSABRG00000017664	ENSABRG00000017670	QRICH1 (ENSABRG00000017813) #25	IMPDH2 (ENSABRG00000017852) #26	NDUFAF3 (ENSABRG00000018501) #27	DALRD3 (ENSABRG00000018505) #28	WDR6 (ENSABRG00000018507) #29	P4HTM (ENSABRG00000018510) #30	ENSABRG00000018535	ARIH2 (ENSABRG00000018552) #31	SLC25A20 (ENSABRG00000018818) #33	PRKAR2A (ENSABRG00000018891) #34	RPP14 (ENSABRG00000018912)	HTD2 (ENSABRG00000018916)
Phasianidae	ANCESTRAL SPECIES	16	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596.i	ENSGT00940000161421.b	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00510000048121
Phasianidae_b	ANCESTRAL SPECIES	16	ENSGT00940000157794	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596.i	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34	ENSGT00510000048121
Turkey	MODERN SPECIES	5	ENSMGAG00000016407	ENSMGAG00000008000	SETD5 (ENSMGAG00000007897)	LHFPL4 (ENSMGAG00000008224)	MTMR14 (ENSMGAG00000008243)	CPNE9 (ENSMGAG00000008248)	BRPF1 (ENSMGAG00000008276)	OGG1 (ENSMGAG00000008346)	CAMK1 (ENSMGAG00000008359)	TADA3 (ENSMGAG00000008391)	TTLL3 (ENSMGAG00000008412)	JAGN1 (ENSMGAG00000016819)	CRELD1 (ENSMGAG00000008449)	ENSMGAG00000008459 #18	ENSMGAG00000008466	LAMB2 (ENSMGAG00000008010) #22	USP19 (ENSMGAG00000008096) #23	ENSMGAG00000008103	ENSMGAG00000019310	QARS1 (ENSMGAG00000008134) #24	QRICH1 (ENSMGAG00000008194) #25	IMPDH2 (ENSMGAG00000008504) #26	NDUFAF3 (ENSMGAG00000019024) #27	DALRD3 (ENSMGAG00000008545) #28	ENSMGAG00000008550 #29	P4HTM (ENSMGAG00000008559) #30	ENSMGAG00000008569	ARIH2 (ENSMGAG00000008587) #31	SLC25A20 (ENSMGAG00000008643) #33	PRKAR2A (ENSMGAG00000008680) #34	RPP14 (ENSMGAG00000015512)
Chicken	DUPLICATION
Chicken	DUPLICATION
Chicken	MODERN SPECIES	3	CAMK1 (ENSGALG00010021556)	TADA3 (ENSGALG00010021568)	ARPC4 (ENSGALG00010021599)	ENSGALG00010021603	ENSGALG00010021616	RPUSD3 (ENSGALG00010021646)	JAGN1 (ENSGALG00010021657)	IL17RC (ENSGALG00010019246)	CRELD1 (ENSGALG00010019310)	PRRT3 (ENSGALG00010019315)	CCDC36 (ENSGALG00010021775) #18	KLHDC8B (ENSGALG00010021792) #20	ENSGALG00010021799	CCDC71 (ENSGALG00010021785) #21	ENSGALG00010022674 #22	LAMB2 (ENSGALG00010021762) #22	ENSGALG00010019255 #22	USP19 (ENSGALG00010022242) #23	SLC6A8 (ENSGALG00010020607)	SLC6A8 (ENSGALG00010019231)	ENSGALG00010022258	QARS (ENSGALG00010020619) #24	QRICH1 (ENSGALG00010020630) #25	IMPDH2 (ENSGALG00010020638) #26	NDUFAF3 (ENSGALG00010020653) #27	DALRD3 (ENSGALG00010020657) #28	ENSGALG00010020670 #29	P4HTM (ENSGALG00010020684) #30	ENSGALG00010020695	ARIH2 (ENSGALG00010020732) #31	SLC25A20 (ENSGALG00010020754) #33
Chicken	MODERN SPECIES	3	TADA3 (ENSGALG00010021568)	ARPC4 (ENSGALG00010021599)	ENSGALG00010021603	ENSGALG00010021616	RPUSD3 (ENSGALG00010021646)	JAGN1 (ENSGALG00010021657)	IL17RC (ENSGALG00010019246)	CRELD1 (ENSGALG00010019310)	PRRT3 (ENSGALG00010019315)	CCDC36 (ENSGALG00010021775) #18	KLHDC8B (ENSGALG00010021792) #20	ENSGALG00010021799	CCDC71 (ENSGALG00010021785) #21	ENSGALG00010022674 #22	LAMB2 (ENSGALG00010021762) #22	ENSGALG00010019255 #22	USP19 (ENSGALG00010022242) #23	SLC6A8 (ENSGALG00010020607)	SLC6A8 (ENSGALG00010019231)	ENSGALG00010022258	QARS (ENSGALG00010020619) #24	QRICH1 (ENSGALG00010020630) #25	IMPDH2 (ENSGALG00010020638) #26	NDUFAF3 (ENSGALG00010020653) #27	DALRD3 (ENSGALG00010020657) #28	ENSGALG00010020670 #29	P4HTM (ENSGALG00010020684) #30	ENSGALG00010020695	ARIH2 (ENSGALG00010020732) #31	SLC25A20 (ENSGALG00010020754) #33	PRKAR2A (ENSGALG00010020764) #34
Chicken	MODERN SPECIES	3	OGG1 (ENSGALG00010021546)	CAMK1 (ENSGALG00010021556)	TADA3 (ENSGALG00010021568)	ARPC4 (ENSGALG00010021599)	ENSGALG00010021603	ENSGALG00010021616	RPUSD3 (ENSGALG00010021646)	JAGN1 (ENSGALG00010021657)	IL17RC (ENSGALG00010019246)	CRELD1 (ENSGALG00010019310)	PRRT3 (ENSGALG00010019315)	CCDC36 (ENSGALG00010021775) #18	KLHDC8B (ENSGALG00010021792) #20	ENSGALG00010021799	CCDC71 (ENSGALG00010021785) #21	ENSGALG00010022674 #22	LAMB2 (ENSGALG00010021762) #22	ENSGALG00010019255 #22	USP19 (ENSGALG00010022242) #23	SLC6A8 (ENSGALG00010020607)	SLC6A8 (ENSGALG00010019231)	ENSGALG00010022258	QARS (ENSGALG00010020619) #24	QRICH1 (ENSGALG00010020630) #25	IMPDH2 (ENSGALG00010020638) #26	NDUFAF3 (ENSGALG00010020653) #27	DALRD3 (ENSGALG00010020657) #28	ENSGALG00010020670 #29	P4HTM (ENSGALG00010020684) #30	ENSGALG00010020695	ARIH2 (ENSGALG00010020732) #31
Lepidosauria	ANCESTRAL SPECIES	14	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000154875 #31
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00940000157863 #33	ENSGT00940000154836 #34
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	30														ENSSMRG00000017255 #22	ENSSMRG00000017256	LAMB2 (ENSSMRG00000017257) #22	USP19 (ENSSMRG00000017261) #23	ENSSMRG00000017272	ENSSMRG00000017274	ENSSMRG00000017275	ENSSMRG00000017287	ZPR1 (ENSSMRG00000017290)	QARS1 (ENSSMRG00000017292) #24	QRICH1 (ENSSMRG00000017295) #25	IMPDH2 (ENSSMRG00000017298) #26	NDUFAF3 (ENSSMRG00000017299) #27	DALRD3 (ENSSMRG00000017304) #28	WDR6 (ENSSMRG00000017305) #29	P4HTM (ENSSMRG00000017306) #30	ENSSMRG00000017307	ARIH2 (ENSSMRG00000017308) #31
Argentine black and white tegu	MODERN SPECIES	30																ENSSMRG00000017255 #22	ENSSMRG00000017256	LAMB2 (ENSSMRG00000017257) #22	USP19 (ENSSMRG00000017261) #23	ENSSMRG00000017272	ENSSMRG00000017274	ENSSMRG00000017275	ENSSMRG00000017287	ZPR1 (ENSSMRG00000017290)	QARS1 (ENSSMRG00000017292) #24	QRICH1 (ENSSMRG00000017295) #25	IMPDH2 (ENSSMRG00000017298) #26	NDUFAF3 (ENSSMRG00000017299) #27	DALRD3 (ENSSMRG00000017304) #28	WDR6 (ENSSMRG00000017305) #29	P4HTM (ENSSMRG00000017306) #30
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	10	TADA3 (ENSPMRG00000019811)	ARPC4 (ENSPMRG00000019805)	ENSPMRG00000019795	ENSPMRG00000019790	RPUSD3 (ENSPMRG00000019782)	JAGN1 (ENSPMRG00000019778)	IL17RE (ENSPMRG00000019760)	IL17RC (ENSPMRG00000019740)	CRELD1 (ENSPMRG00000019728)	C3orf84 (ENSPMRG00000019699) #19	KLHDC8B (ENSPMRG00000019681) #20	ENSPMRG00000019673	CCDC71 (ENSPMRG00000019666) #21	ENSPMRG00000019663	ENSPMRG00000017713 #22	LAMB2 (ENSPMRG00000015114) #22	USP19 (ENSPMRG00000014705) #23	ENSPMRG00000014196	ENSPMRG00000014107	ENSPMRG00000014095	ENSPMRG00000014089	QARS1 (ENSPMRG00000013878) #24	QRICH1 (ENSPMRG00000013823) #25	IMPDH2 (ENSPMRG00000013803) #26	NDUFAF3 (ENSPMRG00000013795) #27	DALRD3 (ENSPMRG00000013785) #28	WDR6 (ENSPMRG00000013779) #29	ENSPMRG00000013772	P4HTM (ENSPMRG00000013765) #30	ARIH2 (ENSPMRG00000013741) #31	SLC25A20 (ENSPMRG00000013723) #33
Common wall lizard	MODERN SPECIES	10	CAMK1 (ENSPMRG00000019817)	TADA3 (ENSPMRG00000019811)	ARPC4 (ENSPMRG00000019805)	ENSPMRG00000019795	ENSPMRG00000019790	RPUSD3 (ENSPMRG00000019782)	JAGN1 (ENSPMRG00000019778)	IL17RE (ENSPMRG00000019760)	IL17RC (ENSPMRG00000019740)	CRELD1 (ENSPMRG00000019728)	C3orf84 (ENSPMRG00000019699) #19	KLHDC8B (ENSPMRG00000019681) #20	ENSPMRG00000019673	CCDC71 (ENSPMRG00000019666) #21	ENSPMRG00000019663	ENSPMRG00000017713 #22	LAMB2 (ENSPMRG00000015114) #22	USP19 (ENSPMRG00000014705) #23	ENSPMRG00000014196	ENSPMRG00000014107	ENSPMRG00000014095	ENSPMRG00000014089	QARS1 (ENSPMRG00000013878) #24	QRICH1 (ENSPMRG00000013823) #25	IMPDH2 (ENSPMRG00000013803) #26	NDUFAF3 (ENSPMRG00000013795) #27	DALRD3 (ENSPMRG00000013785) #28	WDR6 (ENSPMRG00000013779) #29	ENSPMRG00000013772	P4HTM (ENSPMRG00000013765) #30	ARIH2 (ENSPMRG00000013741) #31
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00640000091554	ENSGT00940000156378.b	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00950000185305	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1	ENSACAG00000035940	ENSACAG00000011790	TRIM7 (ENSACAG00000011919)	ENSACAG00000011977	ENSACAG00000026326	ENSACAG00000042226	ENSACAG00000011998	ENSACAG00000029374	ENSACAG00000040616	ENSACAG00000042132	ENSACAG00000025111	ENSACAG00000012008	ENSACAG00000039807	CCDC71 (ENSACAG00000027709) #21	ENSACAG00000014991 #22	LAMB2 (ENSACAG00000013350) #22	ENSACAG00000045278	USP19 (ENSACAG00000013261) #23	ENSACAG00000040455	ENSACAG00000013014	ENSACAG00000040596	ENSACAG00000013002	ENSACAG00000042722	ENSACAG00000012958	ENSACAG00000022588	ENSACAG00000037077	ENSACAG00000041783	QARS1 (ENSACAG00000012645) #24	QRICH1 (ENSACAG00000012576) #25	IMPDH2 (ENSACAG00000012452) #26	NDUFAF3 (ENSACAG00000012425) #27
Lizard	MODERN SPECIES	1	ENSACAG00000029685	ENSACAG00000035940	ENSACAG00000011790	TRIM7 (ENSACAG00000011919)	ENSACAG00000011977	ENSACAG00000026326	ENSACAG00000042226	ENSACAG00000011998	ENSACAG00000029374	ENSACAG00000040616	ENSACAG00000042132	ENSACAG00000025111	ENSACAG00000012008	ENSACAG00000039807	CCDC71 (ENSACAG00000027709) #21	ENSACAG00000014991 #22	LAMB2 (ENSACAG00000013350) #22	ENSACAG00000045278	USP19 (ENSACAG00000013261) #23	ENSACAG00000040455	ENSACAG00000013014	ENSACAG00000040596	ENSACAG00000013002	ENSACAG00000042722	ENSACAG00000012958	ENSACAG00000022588	ENSACAG00000037077	ENSACAG00000041783	QARS1 (ENSACAG00000012645) #24	QRICH1 (ENSACAG00000012576) #25	IMPDH2 (ENSACAG00000012452) #26
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000156378.b.d	ENSGT00940000156378.b.c	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857.d	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00730000111360	ENSGT00980000198877	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621.g.b #28	ENSGT00390000014621.g.a #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	OGG1 (ENSNNAG00000000945)	ENSNNAG00000001157	ENSNNAG00000001203	TADA3 (ENSNNAG00000001245)	ARPC4 (ENSNNAG00000001264)	TTLL3 (ENSNNAG00000001283)	RPUSD3 (ENSNNAG00000001292)	JAGN1 (ENSNNAG00000001308)	ENSNNAG00000001313	ENSNNAG00000001329	CRELD1 (ENSNNAG00000001343)	ENSNNAG00000001369	C3orf84 (ENSNNAG00000001403) #19	KLHDC8B (ENSNNAG00000001437) #20	ENSNNAG00000001457 #22	LAMB2 (ENSNNAG00000001533) #22	USP19 (ENSNNAG00000001936) #23	ENSNNAG00000002819	ENSNNAG00000002829	ENSNNAG00000002833	ENSNNAG00000002836	ENSNNAG00000002846 #24	QRICH1 (ENSNNAG00000002859) #25	IMPDH2 (ENSNNAG00000002870) #26	NDUFAF3 (ENSNNAG00000002892) #27	ENSNNAG00000002905 #28	ENSNNAG00000002914 #28	ENSNNAG00000002924 #29	P4HTM (ENSNNAG00000002941) #30	ARIH2 (ENSNNAG00000002958) #31	SLC25A20 (ENSNNAG00000002971) #33
Indian cobra	MODERN SPECIES	1	BRPF1 (ENSNNAG00000000879)	OGG1 (ENSNNAG00000000945)	ENSNNAG00000001157	ENSNNAG00000001203	TADA3 (ENSNNAG00000001245)	ARPC4 (ENSNNAG00000001264)	TTLL3 (ENSNNAG00000001283)	RPUSD3 (ENSNNAG00000001292)	JAGN1 (ENSNNAG00000001308)	ENSNNAG00000001313	ENSNNAG00000001329	CRELD1 (ENSNNAG00000001343)	ENSNNAG00000001369	C3orf84 (ENSNNAG00000001403) #19	KLHDC8B (ENSNNAG00000001437) #20	ENSNNAG00000001457 #22	LAMB2 (ENSNNAG00000001533) #22	USP19 (ENSNNAG00000001936) #23	ENSNNAG00000002819	ENSNNAG00000002829	ENSNNAG00000002833	ENSNNAG00000002836	ENSNNAG00000002846 #24	QRICH1 (ENSNNAG00000002859) #25	IMPDH2 (ENSNNAG00000002870) #26	NDUFAF3 (ENSNNAG00000002892) #27	ENSNNAG00000002905 #28	ENSNNAG00000002914 #28	ENSNNAG00000002924 #29	P4HTM (ENSNNAG00000002941) #30	ARIH2 (ENSNNAG00000002958) #31
Elapidae_a	ANCESTRAL SPECIES	69	ENSGT00940000157794.c	ENSGT00640000091554	ENSGT00940000156378.b.c	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857.d	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00980000198877	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621.g.b #28	ENSGT00390000014621.g.a #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	6062																ENSLLTG00000009697 #22	USP19 (ENSLLTG00000009725) #23	ENSLLTG00000009785
Blue-lipped sea krait	MODERN SPECIES	6765																ENSLLTG00000015382 #22
Acanthophiinae	ANCESTRAL SPECIES	67	ENSGT00640000091554	ENSGT00940000156378.b.d	ENSGT00940000156378.b.c	ENSGT00390000008947	ENSGT00390000016233	ENSGT00940000154857.d	ENSGT00940000161059	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00980000198877	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00420000030545.h	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00390000018312 #27	ENSGT00390000014621.g.b #28	ENSGT00390000014621.g.a #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000154875 #31	ENSGT00940000157863 #33
Mainland tiger snake	MODERN SPECIES	180	OGG1 (ENSNSUG00000004314)	CAMK1 (ENSNSUG00000004322)	ENSNSUG00000004422	ENSNSUG00000004459	ARPC4 (ENSNSUG00000004486)	TTLL3 (ENSNSUG00000004487)	RPUSD3 (ENSNSUG00000004492)	JAGN1 (ENSNSUG00000004497)	ENSNSUG00000004507	CRELD1 (ENSNSUG00000004509)	ENSNSUG00000004512	C3orf84 (ENSNSUG00000004516) #19	KLHDC8B (ENSNSUG00000004528) #20	CCDC71 (ENSNSUG00000004533) #21	ENSNSUG00000004534	LAMB2 (ENSNSUG00000004564) #22	USP19 (ENSNSUG00000005212) #23	ENSNSUG00000005768	ENSNSUG00000005769	ENSNSUG00000005770	ENSNSUG00000005771	QARS1 (ENSNSUG00000005772) #24	QRICH1 (ENSNSUG00000006247) #25	IMPDH2 (ENSNSUG00000006248) #26	NDUFAF3 (ENSNSUG00000006250) #27	ENSNSUG00000006253 #28	ENSNSUG00000006254 #28	WDR6 (ENSNSUG00000006255) #29	P4HTM (ENSNSUG00000006258) #30	ARIH2 (ENSNSUG00000006307) #31	SLC25A20 (ENSNSUG00000006388) #33
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	100	CPNE9 (ENSPTXG00000012841)	BRPF1 (ENSPTXG00000012844)	OGG1 (ENSPTXG00000012847)	CAMK1 (ENSPTXG00000012848)	TADA3 (ENSPTXG00000012849)	ARPC4 (ENSPTXG00000012850)	TTLL3 (ENSPTXG00000012851)	RPUSD3 (ENSPTXG00000012852)	JAGN1 (ENSPTXG00000012853)	IL17RE (ENSPTXG00000012854)	ENSPTXG00000012855	C3orf84 (ENSPTXG00000012856) #19	KLHDC8B (ENSPTXG00000012857) #20	CCDC71 (ENSPTXG00000012858) #21	ENSPTXG00000012859 #22	LAMB2 (ENSPTXG00000012864) #22	USP19 (ENSPTXG00000009840) #23	ENSPTXG00000010167	ENSPTXG00000010168	ENSPTXG00000010169	ENSPTXG00000010170	QARS1 (ENSPTXG00000010171) #24	QRICH1 (ENSPTXG00000010172) #25	IMPDH2 (ENSPTXG00000010173) #26	NDUFAF3 (ENSPTXG00000010175) #27	DALRD3 (ENSPTXG00000010179) #28	ENSPTXG00000010184 #29	ENSPTXG00000010186 #29	P4HTM (ENSPTXG00000010190) #30	ARIH2 (ENSPTXG00000010213) #31	SLC25A20 (ENSPTXG00000010215) #33
Eastern brown snake	MODERN SPECIES	100	MTMR14 (ENSPTXG00000012837)	CPNE9 (ENSPTXG00000012841)	BRPF1 (ENSPTXG00000012844)	OGG1 (ENSPTXG00000012847)	CAMK1 (ENSPTXG00000012848)	TADA3 (ENSPTXG00000012849)	ARPC4 (ENSPTXG00000012850)	TTLL3 (ENSPTXG00000012851)	RPUSD3 (ENSPTXG00000012852)	JAGN1 (ENSPTXG00000012853)	IL17RE (ENSPTXG00000012854)	ENSPTXG00000012855	C3orf84 (ENSPTXG00000012856) #19	KLHDC8B (ENSPTXG00000012857) #20	CCDC71 (ENSPTXG00000012858) #21	ENSPTXG00000012859 #22	LAMB2 (ENSPTXG00000012864) #22	USP19 (ENSPTXG00000009840) #23	ENSPTXG00000010167	ENSPTXG00000010168	ENSPTXG00000010169	ENSPTXG00000010170	QARS1 (ENSPTXG00000010171) #24	QRICH1 (ENSPTXG00000010172) #25	IMPDH2 (ENSPTXG00000010173) #26	NDUFAF3 (ENSPTXG00000010175) #27	DALRD3 (ENSPTXG00000010179) #28	ENSPTXG00000010184 #29	ENSPTXG00000010186 #29	P4HTM (ENSPTXG00000010190) #30	ARIH2 (ENSPTXG00000010213) #31
Anura	ANCESTRAL SPECIES	36			ENSGT00940000154857	ENSGT00940000161059	ENSGT00390000018596.A.a.a	ENSGT00390000005596	ENSGT00940000161421	ENSGT00730000111286	ENSGT00940000160255	ENSGT00660000097455	ENSGT00390000012418 #18	ENSGT00390000002177 #19	ENSGT00940000160815 #20	ENSGT00390000003093	ENSGT00940000155306.a #21	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00940000164714	ENSGT01050000244841.A.b.b.b	ENSGT00940000153394.d	ENSGT00550000074972 #24	ENSGT00940000155241 #25	ENSGT00940000157726 #26	ENSGT00910000146976	ENSGT00390000018312 #27	ENSGT00390000014621 #28	ENSGT00420000029923 #29	ENSGT00390000014570 #30	ENSGT00940000164203	ENSGT00940000154875 #31	ENSGT00950000182994.B.a.a.b
Frog	MODERN SPECIES	4	cidec (ENSXETG00000023547)	rpusd3 (ENSXETG00000023546)	XB5950141 [provisional] (ENSXETG00000023542)	creld1 (ENSXETG00000023532)	ENSXETG00000036031	ENSXETG00000042322	ENSXETG00000022412	ENSXETG00000041849	ENSXETG00000045036	ENSXETG00000023522	iho1 (ENSXETG00000041762) #18	C3orf84 (ENSXETG00000040873) #19	klhdc8b (ENSXETG00000023516) #20	ENSXETG00000035111	ccdc71 (ENSXETG00000039218) #21	lamb2 (ENSXETG00000032994) #22	usp19 (ENSXETG00000008619) #23	slc6a8l (ENSXETG00000008612)	gpr22l (ENSXETG00000047479)	ENSXETG00000008605	pim1 (ENSXETG00000045263)	qars1 (ENSXETG00000009351) #24	qrich1 (ENSXETG00000009347) #25	ENSXETG00000035974	impdh2 (ENSXETG00000009343) #26	ndufaf3 (ENSXETG00000024755) #27	dalrd3 (ENSXETG00000009339) #28	wdr6 (ENSXETG00000009340) #29	ENSXETG00000009337	arih2 (ENSXETG00000024753) #31	frzb2 (ENSXETG00000009335)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	11	CIDEC (ENSLLEG00000028241)	JAGN1 (ENSLLEG00000028213)	IL17RE (ENSLLEG00000028072)	ENSLLEG00000027785	CRELD1 (ENSLLEG00000027721)	ENSLLEG00000027685	ENSLLEG00000027655	ENSLLEG00000027608	ENSLLEG00000027542	ENSLLEG00000027476	ENSLLEG00000027428 #19	KLHDC8B (ENSLLEG00000027384) #20	ENSLLEG00000027280	CCDC71 (ENSLLEG00000027265) #21	ENSLLEG00000027016 #22	LAMB2 (ENSLLEG00000026738) #22	ENSLLEG00000026400 #23	ENSLLEG00000025801	ENSLLEG00000025735	ENSLLEG00000025646	ENSLLEG00000025635	ENSLLEG00000025626	ENSLLEG00000025560	QARS1 (ENSLLEG00000025177) #24	QRICH1 (ENSLLEG00000024772) #25	IMPDH2 (ENSLLEG00000024470) #26	ENSLLEG00000024382	NDUFAF3 (ENSLLEG00000024298) #27	HSD17B7 (ENSLLEG00000024177)	ENSLLEG00000024154	ENSLLEG00000023854
Leishan spiny toad	MODERN SPECIES	11	RPUSD3 (ENSLLEG00000028295)	CIDEC (ENSLLEG00000028241)	JAGN1 (ENSLLEG00000028213)	IL17RE (ENSLLEG00000028072)	ENSLLEG00000027785	CRELD1 (ENSLLEG00000027721)	ENSLLEG00000027685	ENSLLEG00000027655	ENSLLEG00000027608	ENSLLEG00000027542	ENSLLEG00000027476	ENSLLEG00000027428 #19	KLHDC8B (ENSLLEG00000027384) #20	ENSLLEG00000027280	CCDC71 (ENSLLEG00000027265) #21	ENSLLEG00000027016 #22	LAMB2 (ENSLLEG00000026738) #22	ENSLLEG00000026400 #23	ENSLLEG00000025801	ENSLLEG00000025735	ENSLLEG00000025646	ENSLLEG00000025635	ENSLLEG00000025626	ENSLLEG00000025560	QARS1 (ENSLLEG00000025177) #24	QRICH1 (ENSLLEG00000024772) #25	IMPDH2 (ENSLLEG00000024470) #26	ENSLLEG00000024382	NDUFAF3 (ENSLLEG00000024298) #27	HSD17B7 (ENSLLEG00000024177)	ENSLLEG00000024154
Coelacanth	MODERN SPECIES	636	RBSN (ENSLACG00000009214)	TRH (ENSLACG00000009747)	ENSLACG00000011971	PLXND1 (ENSLACG00000012134)	ENSLACG00000012953	RHO (ENSLACG00000013050)	IFT122 (ENSLACG00000013147)	ENSLACG00000013513	ENSLACG00000013572	RPL32 (ENSLACG00000013692)	CAND2 (ENSLACG00000013720)	SEC13 (ENSLACG00000013908)	ENSLACG00000014016	ENSLACG00000014041	ENSLACG00000014341	LAMB2 (ENSLACG00000014833) #22	USP19 (ENSLACG00000015154) #23	ENSLACG00000015485	ENSLACG00000015953
Actinopterygii	ANCESTRAL SPECIES	563														ENSGT00390000012948.b	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	9															ENSECRG00000018666 #22	lamb2 (ENSECRG00000018473) #22	trappc6b (ENSECRG00000018376)	ENSECRG00000018350	USP19 (ENSECRG00000018313) #23	ENSECRG00000018297	rps25 (ENSECRG00000018233)	KLHDC8B (ENSECRG00000018202) #20	ENSECRG00000018177 #18	ENSECRG00000018150	CRP (ENSECRG00000018128)	kbtbd12 (ENSECRG00000018104)	MGLL (ENSECRG00000018082)	xpc (ENSECRG00000018047)	TMEM43 (ENSECRG00000018022)	ENSECRG00000017997	IFT122 (ENSECRG00000017601)
Reedfish	MODERN SPECIES	9																ENSECRG00000018666 #22	lamb2 (ENSECRG00000018473) #22	trappc6b (ENSECRG00000018376)	ENSECRG00000018350	USP19 (ENSECRG00000018313) #23	ENSECRG00000018297	rps25 (ENSECRG00000018233)	KLHDC8B (ENSECRG00000018202) #20	ENSECRG00000018177 #18	ENSECRG00000018150	CRP (ENSECRG00000018128)	kbtbd12 (ENSECRG00000018104)	MGLL (ENSECRG00000018082)	xpc (ENSECRG00000018047)	TMEM43 (ENSECRG00000018022)	ENSECRG00000017997
Neopterygii	ANCESTRAL SPECIES	70	ENSGT00390000005529.a	ENSGT00940000157660	ENSGT00940000156286	ENSGT00390000003224.A	ENSGT00950000182846.a.a.a.b	ENSGT00510000047225	ENSGT00510000048121	ENSGT00530000065109	ENSGT00390000017669	ENSGT00940000155146	ENSGT00940000157869	ENSGT00940000155306.a #21	ENSGT00940000165924	ENSGT00940000167093	ENSGT00390000012948.b	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423
Spotted gar	MODERN SPECIES	671	ARF4 (ENSLOCG00000013270)	dennd6aa (ENSLOCG00000013265)	slmapa (ENSLOCG00000013251)	FLNB (ENSLOCG00000013231)	ENSLOCG00000013227	DNASE1L3 (ENSLOCG00000013216)	abhd6b (ENSLOCG00000013212)	rpp14 (ENSLOCG00000013207)	HTD2 (ENSLOCG00000013205)	pxk (ENSLOCG00000013200)	pdhb (ENSLOCG00000013193)	kctd6a (ENSLOCG00000013186)	ccdc71 (ENSLOCG00000013182) #21	ENSLOCG00000013171	ENSLOCG00000013159	lamb2 (ENSLOCG00000013129) #22	trappc6b (ENSLOCG00000013125)	USP19 (ENSLOCG00000013120) #23	ENSLOCG00000013114	ENSLOCG00000013109	ENSLOCG00000013104 #19	ENSLOCG00000013101	ENSLOCG00000013096	ENSLOCG00000013088	ENSLOCG00000013082	kbtbd12 (ENSLOCG00000013077)	mgll (ENSLOCG00000013071)	xpc (ENSLOCG00000013060)	TMEM43 (ENSLOCG00000013056)	ENSLOCG00000013054	IFT122 (ENSLOCG00000013048)
Osteoglossocephalai	ANCESTRAL SPECIES	84	ENSGT00940000164997	ENSGT00940000153311.a.a.b	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000154923.C.x	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT01070000253775.a.d.a.b.b.h.a	ENSGT00940000164714	ENSGT00940000164203	ENSGT00390000014570 #30	ENSGT00940000156963.a.a	ENSGT00940000157756	ENSGT00940000157677	ENSGT00940000166103	ENSGT00390000013347.b	ENSGT00940000157524 #12	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a
Clupeocephala	ANCESTRAL SPECIES	53	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423
Otomorpha	ANCESTRAL SPECIES	103	ENSGT00950000182945.b.a.a.a.b.b.b ##14	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157530.a	ENSGT00390000006988	ENSGT00940000156616.j	ENSGT00940000158431.a.b	ENSGT00390000012929	ENSGT00530000063715.a	ENSGT00940000166364	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h
Clupeiformes	ANCESTRAL SPECIES	103	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.b ##14	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157530.a	ENSGT00390000006988	ENSGT00940000156616.j	ENSGT00940000161131.a.a	ENSGT00390000012929	ENSGT00530000063715.a
Atlantic herring	MODERN SPECIES	20	lrrc23 (ENSCHAG00000017271)	RBM10 (ENSCHAG00000017390)	ENSCHAG00000017441 ##14	ENSCHAG00000017491	arhgef3l (ENSCHAG00000017606)	uba1 (ENSCHAG00000017679)	ENSCHAG00000018643	adnpb (ENSCHAG00000018724)	dpm1 (ENSCHAG00000018736)	ENSCHAG00000018871	taf13 (ENSCHAG00000018966)	tnnc2.2 (ENSCHAG00000018972)	TNNC2 (ENSCHAG00000019016)	ENSCHAG00000019059	ENSCHAG00000019282	lamb2 (ENSCHAG00000020749) #22	USP19 (ENSCHAG00000022835) #23	ENSCHAG00000022964	ENSCHAG00000022975	guca1b (ENSCHAG00000022983)	oard1 (ENSCHAG00000022998)	apobec2b (ENSCHAG00000023007)	ENSCHAG00000023009	ccdc115 (ENSCHAG00000023013)	ebp (ENSCHAG00000023018)	TAF4 (ENSCHAG00000023023)	lsm14b (ENSCHAG00000023053)	PSMA7 (ENSCHAG00000023064)	SS18L1 (ENSCHAG00000023094)	MTG2 (ENSCHAG00000023118)	ENSCHAG00000023127
Denticle herring	MODERN SPECIES	1	ENSDCDG00000003723	ENSDCDG00000003729 ##14	arhgef3l (ENSDCDG00000003732)	uba1 (ENSDCDG00000003833)	ENSDCDG00000005150	adnpb (ENSDCDG00000005163)	dpm1 (ENSDCDG00000005171)	ENSDCDG00000005202	taf13 (ENSDCDG00000005207)	tnnc2.2 (ENSDCDG00000005212)	ENSDCDG00000005219	ENSDCDG00000005220	ENSDCDG00000005224	ENSDCDG00000005229	ENSDCDG00000005334	lamb2 (ENSDCDG00000013139) #22	USP19 (ENSDCDG00000022772) #23	ENSDCDG00000027115	ENSDCDG00000027116	guca1b (ENSDCDG00000027117)	FBLN2 (ENSDCDG00000027122)	NUP210 (ENSDCDG00000027237)	IQSEC1 (ENSDCDG00000027970)	ENSDCDG00000028047	cnbpa (ENSDCDG00000028049)	raf1a (ENSDCDG00000028058)	syn2a (ENSDCDG00000028170)	VGLL4 (ENSDCDG00000028538)	slc6a1a (ENSDCDG00000028568)	ENSDCDG00000029564	ENSDCDG00000029572
Otophysi	ANCESTRAL SPECIES	2	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.a	ENSGT00940000165924	ENSGT00940000180092	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000159748	ENSGT00940000161969	ENSGT00940000153541.B	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c	ENSGT00940000158549	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.c.a	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b
Characiphysae	ANCESTRAL SPECIES	5	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.a	ENSGT00940000165924	ENSGT00940000180092	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000159748	ENSGT00940000161969	ENSGT00940000153541.B	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c	ENSGT00940000158549	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.c.a	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b
Channel catfish	MODERN SPECIES	6	ENSIPUG00000014488	ZNF362 (ENSIPUG00000014511)	ENSIPUG00000014594	ENSIPUG00000014635	arhgef3l (ENSIPUG00000014660)	uba1 (ENSIPUG00000014687)	ENSIPUG00000018067	adnpb (ENSIPUG00000018079)	DPM1 (ENSIPUG00000018085)	SLC35C2 (ENSIPUG00000018140)	taf13 (ENSIPUG00000018237)	TNNC2 (ENSIPUG00000018245)	TNNC2 (ENSIPUG00000018272)	ENSIPUG00000018307	ENSIPUG00000018324	lamb2 (ENSIPUG00000018382) #22	USP19 (ENSIPUG00000018493) #23	ENSIPUG00000018613	lrrc23 (ENSIPUG00000018624)	tktb (ENSIPUG00000018646)	TNNC1 (ENSIPUG00000018737)	ENSIPUG00000018749	BGN (ENSIPUG00000018777)	B4GALT3 (ENSIPUG00000018800)	cfap126 (ENSIPUG00000018839)	ENSIPUG00000018858	fam58a (ENSIPUG00000018872)	atp2b3 (ENSIPUG00000018898)	haus7 (ENSIPUG00000019059)	ENSIPUG00000019083	emd (ENSIPUG00000019096)
Characiphysae_b	ANCESTRAL SPECIES	8	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.a	ENSGT00940000165924	ENSGT00940000180092	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000159748	ENSGT00940000161969	ENSGT00940000153541.B	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c	ENSGT00940000158549	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.c.a	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b
Characoidei	ANCESTRAL SPECIES	8	ENSGT00940000165031.b	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.a	ENSGT00940000165924	ENSGT00940000180092	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000159748	ENSGT00940000161969	ENSGT00940000153541.B	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c	ENSGT00940000158549	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.c.a	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b
Red-bellied piranha	MODERN SPECIES	666												ENSPNAG00000024987	ENSPNAG00000024968	si:rp71-17i16.6 (ENSPNAG00000005371)	ENSPNAG00000024919	lamb2 (ENSPNAG00000024878) #22	USP19 (ENSPNAG00000024823) #23	ENSPNAG00000024797	lrrc23 (ENSPNAG00000024789)	tktb (ENSPNAG00000024771)	tnnc1b (ENSPNAG00000024667)	ENSPNAG00000024631
Mexicana tetra	MODERN SPECIES	6	ENSAMXG00000015187	ENSAMXG00000015215	arhgef3l (ENSAMXG00000037715)	uba1 (ENSAMXG00000015276)	ENSAMXG00000033323	adnpb (ENSAMXG00000012100)	dpm1 (ENSAMXG00000030726)	ENSAMXG00000012384	taf13 (ENSAMXG00000025626)	tnnc2.2 (ENSAMXG00000012860)	TNNC2 (ENSAMXG00000012883)	ENSAMXG00000039709	ENSAMXG00000012902	si:rp71-17i16.6 (ENSAMXG00000029152)	ENSAMXG00000012954	lamb2 (ENSAMXG00000013033) #22	USP19 (ENSAMXG00000013109) #23	ENSAMXG00000013163	ENSAMXG00000031907	lrrc23 (ENSAMXG00000034263)	tktb (ENSAMXG00000013176)	ENSAMXG00000013221	tnnc1b (ENSAMXG00000013191)	bgnb (ENSAMXG00000013240)	B4GALT3 (ENSAMXG00000013257)	cfap126 (ENSAMXG00000013275)	ccnq (ENSAMXG00000033281)	atp2b3b (ENSAMXG00000013300)	ENSAMXG00000043619	ENSAMXG00000013402	emd (ENSAMXG00000033874)
Electric eel	MODERN SPECIES	27	ENSEEEG00000007801	znf362b (ENSEEEG00000007799)	arhgef3l (ENSEEEG00000007797)	uba1 (ENSEEEG00000007735)	ENSEEEG00000007725	ENSEEEG00000007724	adnpb (ENSEEEG00000007723)	dpm1 (ENSEEEG00000007718)	ENSEEEG00000007711	slc35c2 (ENSEEEG00000007709)	taf13 (ENSEEEG00000007708)	tnnc2.2 (ENSEEEG00000007684)	ENSEEEG00000007675	ENSEEEG00000007656	ENSEEEG00000007650	lamb2 (ENSEEEG00000006991) #22	USP19 (ENSEEEG00000006854) #23	ENSEEEG00000006843	lrrc23 (ENSEEEG00000006839)	tktb (ENSEEEG00000006770)	tnnc1b (ENSEEEG00000006742)	ENSEEEG00000006741	bgnb (ENSEEEG00000006739)	B4GALT3 (ENSEEEG00000006738)	cfap126 (ENSEEEG00000006737)	ccnq (ENSEEEG00000006736)	atp2b3b (ENSEEEG00000006571)	ENSEEEG00000006567	emd (ENSEEEG00000006566)	rpl10 (ENSEEEG00000006045)	dnase1l1 (ENSEEEG00000006037)
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00940000165031.b	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.a	ENSGT00940000165924	ENSGT00940000180092	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000159748	ENSGT00940000161969	ENSGT00940000153541.B	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c	ENSGT00940000158549	ENSGT00390000001092	ENSGT00940000155445	ENSGT00940000165254.c.a	ENSGT00390000003937	ENSGT00940000158219.a	ENSGT00510000050141.b	ENSGT00940000153588.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	346															ENSGT00940000167093.b	ENSGT00940000156060.bc #22	ENSGT00940000159085.f #23	ENSGT00390000003093.a	ENSGT00940000159748	ENSGT00940000161969.n	ENSGT00940000153541.B.n	ENSGT00940000155311.C.c.b	ENSGT00940000158549.d	ENSGT00390000001092	ENSGT00940000155445.o	ENSGT00940000165254.c.a.a	ENSGT00390000003937	ENSGT00940000158219.a.f	ENSGT00940000153588.b.c	ENSGT00390000003897.r.b	ENSGT00950000182846.a.a.a.a.a.a.f
Cyprininae_a	ANCESTRAL SPECIES	69															ENSGT00940000167093.b	ENSGT00940000156060.bc #22	ENSGT00940000159085.f #23	ENSGT00390000003093.a	ENSGT00940000159748	ENSGT00940000161969.n	ENSGT00940000153541.B.n	ENSGT00940000155311.C.c.b	ENSGT00940000158549.d	ENSGT00390000001092	ENSGT00940000155445.o	ENSGT00940000165254.c.a.a	ENSGT00390000003937	ENSGT00510000050141.b	ENSGT00940000153588.b.c	ENSGT00390000003897.r.b	ENSGT00950000182846.a.a.a.a.a.a.f
Common carp reference	MODERN SPECIES	49	ENSCCRG00000036828	znf362b (ENSCCRG00000036848)	ENSCCRG00000036861	ENSCCRG00000036876	arhgef3l (ENSCCRG00000063454)	uba1 (ENSCCRG00000054526)	ENSCCRG00000049131	adnpb (ENSCCRG00000021413)	dpm1 (ENSCCRG00000080942)	ENSCCRG00000013954	taf13 (ENSCCRG00000065748)	tnnc2.2 (ENSCCRG00000013128)	ENSCCRG00000079879	ENSCCRG00000074584	ENSCCRG00000077977	lamb2 (ENSCCRG00000028242) #22	ENSCCRG00000022493 #23	lrrc23 (ENSCCRG00000028418)	tktb (ENSCCRG00000058506)	tnnc1b (ENSCCRG00000028410)	bgnb (ENSCCRG00000028406)	ENSCCRG00000082601	cfap126 (ENSCCRG00000056218)	atp2b3b (ENSCCRG00000076378)	ENSCCRG00000047282	ENSCCRG00000019813	dnase1l1 (ENSCCRG00000070827)	rpl10 (ENSCCRG00000019897)	ognb (ENSCCRG00000019953)	kctd6b (ENSCCRG00000020008)	ENSCCRG00000065630
Golden-line barbel	MODERN SPECIES	1283											ENSSGRG00000050907	tnnc2.2 (ENSSGRG00000050909)	ENSSGRG00000050940	ENSSGRG00000050942	ENSSGRG00000050955	lamb2 (ENSSGRG00000051105) #22	USP19 (ENSSGRG00000051688) #23	ENSSGRG00000052167	tktb (ENSSGRG00000052171)	tnnc1b (ENSSGRG00000052244)
Goldfish	MODERN SPECIES	1522										dpm1 (ENSCARG00000068928)	ENSCARG00000068868	taf13 (ENSCARG00000068851)	tnnc2.2 (ENSCARG00000068834)	TNNC2 (ENSCARG00000068821)	ENSCARG00000067568	lamb2 (ENSCARG00000058381) #22	USP19 (ENSCARG00000051888) #23	ENSCARG00000051631	lrrc23 (ENSCARG00000051498)	tktb (ENSCARG00000050352)	tnnc1b (ENSCARG00000050269)	bgnb (ENSCARG00000050188)	B4GALT3 (ENSCARG00000050153)	cfap126 (ENSCARG00000050124)	ccnq (ENSCARG00000050111)	atp2b3b (ENSCARG00000042861)	ENSCARG00000042631	ENSCARG00000042587	FLNA (ENSCARG00000041697)	rpl10 (ENSCARG00000041619)	dnase1l1 (ENSCARG00000041607)
Cyprininae	ANCESTRAL SPECIES	424	ENSGT00940000165571.a	ENSGT00940000165405.d	ENSGT00940000165541.h	ENSGT00530000063631.b.n.b.d	ENSGT00940000153481.B.b	ENSGT00940000153769.G.d	ENSGT00940000153481.B.a	ENSGT00940000153769.G.c.a	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924.h	ENSGT00920000149641.a	ENSGT00940000165924.g	ENSGT00940000167093.a	ENSGT00940000156060.cc #22	ENSGT00940000159085.e #23	ENSGT00390000003093.b	ENSGT00940000161969.m	ENSGT00940000153541.B.m	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c.a	ENSGT00940000158549.c
Cyprininae_a	ANCESTRAL SPECIES	377	ENSGT00940000155545.a.l	ENSGT00940000165571.a	ENSGT00940000165405.d	ENSGT00940000165541.h	ENSGT00530000063631.b.n.b.d	ENSGT00940000153481.B.b	ENSGT00940000153769.G.d	ENSGT00940000153769.G.c.a	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924.h	ENSGT00920000149641.a	ENSGT00940000165924.g	ENSGT00940000167093.a	ENSGT00940000156060.cc #22	ENSGT00940000159085.e #23	ENSGT00390000003093.b	ENSGT00940000161969.m	ENSGT00940000153541.B.m	ENSGT00940000164248.b.b	ENSGT00940000155311.C.c.a	ENSGT00940000158549.c
Common carp reference	MODERN SPECIES	11	zgc:154075 (ENSCCRG00000048324)	ENSCCRG00000055702	znf362b (ENSCCRG00000055362)	ENSCCRG00000081882	ENSCCRG00000045693	arhgef3l (ENSCCRG00000036882)	uba1 (ENSCCRG00000070199)	ENSCCRG00000049129	adnpb (ENSCCRG00000033116)	ENSCCRG00000076248	ENSCCRG00000032208	taf13 (ENSCCRG00000082813)	tnnc2.2 (ENSCCRG00000003810)	ENSCCRG00000003771	ENSCCRG00000026296	lamb2 (ENSCCRG00000028239) #22	ENSCCRG00000027995 #23	ENSCCRG00000055450	tktb (ENSCCRG00000054618)	tnnc1b (ENSCCRG00000068464)	ENSCCRG00000081512	bgnb (ENSCCRG00000031186)	ENSCCRG00000028401	ENSCCRG00000077163	ccnq (ENSCCRG00000047331)	atp2b3b (ENSCCRG00000047309)	ENSCCRG00000047286	FLNA (ENSCCRG00000020242)	rpl10 (ENSCCRG00000062618)	dnase1l1 (ENSCCRG00000078686)	ENSCCRG00000067658
Golden-line barbel	MODERN SPECIES	3652																lamb2 (ENSSGRG00000008040) #22
Zebrafish	MODERN SPECIES	15	ENSDARG00000056961	ENSDARG00000094280	arhgef3l (ENSDARG00000037554)	uba1 (ENSDARG00000037559)	ENSDARG00000057000	adnpb (ENSDARG00000074293)	dpm1 (ENSDARG00000057011)	slc35c2 (ENSDARG00000037517)	taf13 (ENSDARG00000070834)	tnnc2.2 (ENSDARG00000070835)	TNNC2 (ENSDARG00000095002)	ENSDARG00000037526	ENSDARG00000037527	si:rp71-17i16.6 (ENSDARG00000095453)	ENSDARG00000033950	lamb2 (ENSDARG00000002084) #22	USP19 (ENSDARG00000004132) #23	ENSDARG00000092934	lrrc23 (ENSDARG00000006174)	tktb (ENSDARG00000006019)	tnnc1b (ENSDARG00000037539)	ENSDARG00000070857	bgnb (ENSDARG00000002945)	B4GALT3 (ENSDARG00000062329)	cfap126 (ENSDARG00000070868)	ccnq (ENSDARG00000037537)	atp2b3b (ENSDARG00000023445)	ENSDARG00000037432	emd (ENSDARG00000095774)	FLNA (ENSDARG00000074201)	rpl10 (ENSDARG00000025581)
Euteleosteomorpha	ANCESTRAL SPECIES	44	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423
Protacanthopterygii	ANCESTRAL SPECIES	73	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00950000183062.a.b.a	ENSGT00940000156473.e	ENSGT00940000157212.A	ENSGT00940000160979	ENSGT00940000159657.d.g.a	ENSGT01100000263518.B.b.a.a	ENSGT00940000157078.i.a	ENSGT00530000063759.b	ENSGT00950000182846.a.a.a.a.a.a	ENSGT00940000156478	ENSGT00390000007823	ENSGT00940000159151
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	89	ENSGT00940000164997.d	ENSGT00940000153311.a.a.b.d	ENSGT00520000055567.a.a.a.r	ENSGT00950000183056.B.a.h.a	ENSGT00390000002407.c.i.a.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00940000158950.m	ENSGT00950000183211.a.a.a.fb	ENSGT00530000063631.b.n.b.a.b	ENSGT00940000153481.B.f.a	ENSGT00940000153769.G	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a #22	ENSGT00940000159085.g #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00950000183062.a.b.a.f	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b
Huchen	DUPLICATION
Huchen	MODERN SPECIES	703	fkbp1ab (ENSHHUG00000048808)	nsfl1c (ENSHHUG00000048826)	FAM110A (ENSHHUG00000048832)	cox4i2 (ENSHHUG00000048834)	bcl2l1 (ENSHHUG00000048868)	ARFGEF2 (ENSHHUG00000048883)	pard6b (ENSHHUG00000048918)	adnpb (ENSHHUG00000048921)	dpm1 (ENSHHUG00000048925)	slc35c2 (ENSHHUG00000048948)	taf13 (ENSHHUG00000048957)	tnnc2.2 (ENSHHUG00000048962)	ENSHHUG00000048983	ENSHHUG00000048994	ENSHHUG00000049011	ENSHHUG00000049563 #22	ENSHHUG00000049573
Huchen	MODERN SPECIES	3859																lamb2 (ENSHHUG00000041369) #22	USP19 (ENSHHUG00000041259) #23	ENSHHUG00000041255
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00940000164997.d	ENSGT00940000153311.a.a.b.d	ENSGT00520000055567.a.a.a.r	ENSGT00950000183056.B.a.h.a	ENSGT00390000002407.c.i.a.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00940000158950.m	ENSGT00950000183211.a.a.a.fb	ENSGT00530000063631.b.n.b.a.b	ENSGT00940000153481.B.f.a	ENSGT00940000153769.G	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a #22	ENSGT00940000159085.g #23	ENSGT00390000003093	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a
Salmo	ANCESTRAL SPECIES	16	ENSGT00520000055567.a.a.a.r	ENSGT00950000183056.B.a.h.a	ENSGT00390000002407.c.i.a.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00940000158950.m	ENSGT00950000183211.a.a.a.fb	ENSGT00530000063631.b.n.b.a.a.b	ENSGT00530000063631.b.n.b.a.a.a	ENSGT00940000153481.B.f.a	ENSGT00510000048078.c	ENSGT00940000153769.G	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a #22	ENSGT00940000159085.g #23	ENSGT00390000003093.f	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a
River trout	MODERN SPECIES	20	sdcbp2 (ENSSTUG00000034955)	fkbp1ab (ENSSTUG00000034908)	nsfl1c (ENSSTUG00000034899)	FAM110A (ENSSTUG00000034894)	cox4i2 (ENSSTUG00000034867)	bcl2l1 (ENSSTUG00000034849)	ARFGEF2 (ENSSTUG00000032656)	pard6b (ENSSTUG00000032613)	ENSSTUG00000032608	adnpb (ENSSTUG00000032577)	dpm1 (ENSSTUG00000032328)	slc35c2 (ENSSTUG00000032285)	tnnc2.2 (ENSSTUG00000049424)	ENSSTUG00000049422	ENSSTUG00000049398	lamb2 (ENSSTUG00000049320) #22	USP19 (ENSSTUG00000048596) #23	ENSSTUG00000048505	ENSSTUG00000048495	ENSSTUG00000048483	ENSSTUG00000048475	ENSSTUG00000048449	arl8a (ENSSTUG00000048436)	GPR37L1 (ENSSTUG00000048427)	itpr3 (ENSSTUG00000048401)	snx21 (ENSSTUG00000048390)	ENSSTUG00000048382	dnase1l1 (ENSSTUG00000048370)	hm13 (ENSSTUG00000048234)	ID1 (ENSSTUG00000048217)	mrgbp (ENSSTUG00000048212)
Atlantic salmon	MODERN SPECIES	6	sdcbp2 (ENSSSAG00000007056)	fkb1a (ENSSSAG00000088596)	nsfl1c (ENSSSAG00000118708)	ENSSSAG00000103544	cox4i2 (ENSSSAG00000117776)	bcl2l1 (ENSSSAG00000120738)	cox4i2 (ENSSSAG00000007137)	arfgef2 (ENSSSAG00000007235)	pard6b (ENSSSAG00000105221)	ENSSSAG00000097729	ENSSSAG00000008159	taf13 (ENSSSAG00000089038)	tnnc2.2 (ENSSSAG00000008497)	ENSSSAG00000008508	ENSSSAG00000119899	lamb2 (ENSSSAG00000040820) #22	ENSSSAG00000046116 #23	ENSSSAG00000103914	ENSSSAG00000114505	ENSSSAG00000052808	ENSSSAG00000052811	ENSSSAG00000052841	etbr2 (ENSSSAG00000052849)	ENSSSAG00000053074	ENSSSAG00000109613	ENSSSAG00000057872	ENSSSAG00000082099	HM13 (ENSSSAG00000057928)	ID1 (ENSSSAG00000058127)	mrgbp (ENSSSAG00000058155)	ENSSSAG00000082809
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000164997.d	ENSGT00940000153311.a.a.b.d	ENSGT00520000055567.a.a.a.r	ENSGT00950000183056.B.a.h.a	ENSGT00390000002407.c.i.a.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00940000158950.m	ENSGT00950000183211.a.a.a.fb	ENSGT00530000063631.b.n.b.a.b	ENSGT00940000153481.B.f.a	ENSGT00940000153769.G	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a #22	ENSGT00940000159085.g #23	ENSGT00390000003093	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000164997.d	ENSGT00940000153311.a.a.b.d	ENSGT00520000055567.a.a.a.r	ENSGT00950000183056.B.a.h.a	ENSGT00390000002407.c.i.a.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.e	ENSGT00940000158950.m	ENSGT00950000183211.a.a.a.fb	ENSGT00530000063631.b.n.b.a.b	ENSGT00940000153481.B.f.a	ENSGT00940000153769.G	ENSGT00390000012981.a	ENSGT00940000153541.C.a.b.b.a	ENSGT00940000165924	ENSGT00940000167093.e	ENSGT00940000156060.dc.a #22	ENSGT00940000159085.g #23	ENSGT00390000003093	ENSGT00940000167423.a	ENSGT00950000183062.a.b.a.e	ENSGT00940000156473.e.a	ENSGT00940000157212.A.a	ENSGT00940000159657.d.g.a.a	ENSGT01100000263518.B.b.a.a.a	ENSGT00940000157078.i.a.a.a	ENSGT00530000063759.b.b	ENSGT00950000182846.a.a.a.a.a.a.a	ENSGT00940000156478.g.b	ENSGT00940000161109.m.a	ENSGT00390000007823.q	ENSGT00940000159151.g.a
Coho salmon	MODERN SPECIES	8	fkbp1ab (ENSOKIG00005031682)	nsfl1c (ENSOKIG00005031732)	FAM110A (ENSOKIG00005031787)	cox4i2 (ENSOKIG00005031796)	ENSOKIG00005031830	bcl2l1 (ENSOKIG00005031838)	ARFGEF2 (ENSOKIG00005031915)	pard6b (ENSOKIG00005032639)	adnpb (ENSOKIG00005032648)	dpm1 (ENSOKIG00005032660)	ENSOKIG00005032713	taf13 (ENSOKIG00005032951)	tnnc2.2 (ENSOKIG00005032957)	ENSOKIG00005032982	ENSOKIG00005033026	lamb2 (ENSOKIG00005033497) #22	USP19 (ENSOKIG00005034041) #23	ENSOKIG00005034559	ENSOKIG00005004284	ENSOKIG00005004306	ENSOKIG00005004319	ENSOKIG00005004371	arl8a (ENSOKIG00005004495)	GPR37L1 (ENSOKIG00005004534)	itpr3 (ENSOKIG00005004615)	ENSOKIG00005004780	SNX21 (ENSOKIG00005004785)	ENSOKIG00005004801	hm13 (ENSOKIG00005004871)	ID1 (ENSOKIG00005005077)	mrgbp (ENSOKIG00005005094)
Chinook salmon	MODERN SPECIES	7	fkbp1ab (ENSOTSG00005009567)	nsfl1c (ENSOTSG00005009568)	FAM110A (ENSOTSG00005009570)	cox4i2 (ENSOTSG00005009573)	cox4i2 (ENSOTSG00005009576)	bcl2l1 (ENSOTSG00005009579)	ARFGEF2 (ENSOTSG00005009593)	pard6b (ENSOTSG00005010432)	adnpb (ENSOTSG00005010433)	dpm1 (ENSOTSG00005010434)	ENSOTSG00005010445	taf13 (ENSOTSG00005010452)	tnnc2.2 (ENSOTSG00005010455)	ENSOTSG00005010457	ENSOTSG00005010462	lamb2 (ENSOTSG00005010637) #22	USP19 (ENSOTSG00005011488) #23	ENSOTSG00005011603	ENSOTSG00005011604	ID1 (ENSOTSG00005011667)	mrgbp (ENSOTSG00005011669)	sulf2b (ENSOTSG00005011682)	ENSOTSG00005012860	phf20b (ENSOTSG00005012865)	ndrg3b (ENSOTSG00005012869)	sla2b (ENSOTSG00005012912)	edem2 (ENSOTSG00005012913)	ENSOTSG00005012915	ENSOTSG00005012917	gss (ENSOTSG00005012922)	gss (ENSOTSG00005013121)
Rainbow trout	MODERN SPECIES	30	fkbp1ab (ENSOMYG00000008236)	nsfl1c (ENSOMYG00000008262)	ENSOMYG00000008307	cox4i2 (ENSOMYG00000008357)	ENSOMYG00000075782	bcl2l1 (ENSOMYG00000008424)	ENSOMYG00000009630	pard6b (ENSOMYG00000057570)	adnpb (ENSOMYG00000013829)	dpm1 (ENSOMYG00000013883)	ENSOMYG00000008466	TAF13 (ENSOMYG00000051266)	tnnc2.2 (ENSOMYG00000014219)	ENSOMYG00000014244	ENSOMYG00000014316	lamb2 (ENSOMYG00000014735) #22	ENSOMYG00000019987 #23	ENSOMYG00000020237	ENSOMYG00000020243	ENSOMYG00000068859	ENSOMYG00000051710	ENSOMYG00000020248	ENSOMYG00000020257	ENSOMYG00000053330	ENSOMYG00000020284	ENSOMYG00000020307	ENSOMYG00000020318	ENSOMYG00000020490	ENSOMYG00000021767	ENSOMYG00000021775	ENSOMYG00000021910
Salmoninae	ANCESTRAL SPECIES	305	ENSGT00940000153311.a.a.b.c	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a.q.b	ENSGT00950000183056.B.a.h.b	ENSGT00390000002407.c.i.b	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00940000158950.n	ENSGT00950000183211.a.a.a.gb	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00510000048078.d	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000167093.f	ENSGT00940000156060.dc.b #22	ENSGT00940000159085.h #23
Huchen	DUPLICATION
Huchen	MODERN SPECIES	9084																ENSHHUG00000004227 #22
Huchen	MODERN SPECIES	5624																lamb2 (ENSHHUG00000025749) #22	USP19 (ENSHHUG00000026110) #23
Salmoninae_a	ANCESTRAL SPECIES	26	ENSGT00940000153311.a.a.b.c	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a.q.b	ENSGT00950000183056.B.a.h.b	ENSGT00390000002407.c.i.b	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00940000158950.n	ENSGT00950000183211.a.a.a.gb	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00510000048078.d	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000167093.f	ENSGT00940000156060.dc.b #22	ENSGT00940000159085.h #23	ENSGT00940000167423.b	ENSGT00950000183062.a.b.a.f	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b	ENSGT00940000160979	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00520000055634.b.a.c	ENSGT00940000164997.c	ENSGT00940000153311.a.a.b.c	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a.q.b	ENSGT00950000183056.B.a.h.b	ENSGT00390000002407.c.i.b	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00940000158950.n	ENSGT00950000183211.a.a.a.gb	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000156060.dc.b #22	ENSGT00940000159085.h #23	ENSGT00940000167423.b	ENSGT00950000183062.a.b.a.f	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b	ENSGT00940000164502.a.a.d
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT01100000263518.A.a.a.a.d	ENSGT00520000055634.b.a.c	ENSGT00940000164997.c	ENSGT00940000153311.a.a.b.c	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a.q.b	ENSGT00950000183056.B.a.h.b	ENSGT00390000002407.c.i.b	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00940000158950.n	ENSGT00950000183211.a.a.a.gb	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.a	ENSGT00940000156060.dc.b #22	ENSGT00940000159085.h #23	ENSGT00940000167423.b	ENSGT00940000156473.e.b	ENSGT00940000157212.A.b	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00950000182846.a.a.a.a.a.a.b	ENSGT00940000156478.h	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b	ENSGT00940000164502.a.a.d
Coho salmon	MODERN SPECIES	16	sdcbp2 (ENSOKIG00005037115)	fkbp1ab (ENSOKIG00005037137)	ENSOKIG00005037070	nsfl1c (ENSOKIG00005037040)	ENSOKIG00005037027	cox4i2 (ENSOKIG00005036989)	ENSOKIG00005036966	bcl2l1 (ENSOKIG00005036953)	ARFGEF2 (ENSOKIG00005034338)	ENSOKIG00005034124	pard6b (ENSOKIG00005034116)	adnpb (ENSOKIG00005034111)	dpm1 (ENSOKIG00005034086)	taf13 (ENSOKIG00005034073)	tnnc2.2 (ENSOKIG00005034007)	LAMB2 (ENSOKIG00005029579) #22	USP19 (ENSOKIG00005028818) #23	ENSOKIG00005028768	ENSOKIG00005028757	ENSOKIG00005028685	ARL8A (ENSOKIG00005028646)	GPR37L1 (ENSOKIG00005028619)	ITPR3 (ENSOKIG00005028438)	snx21 (ENSOKIG00005028406)	dnase1l1 (ENSOKIG00005028367)	HM13 (ENSOKIG00005028129)	ID1 (ENSOKIG00005028096)	mrgbp (ENSOKIG00005028064)	ENSOKIG00005028046	sulf2b (ENSOKIG00005024715)	ENSOKIG00005024539
Rainbow trout	MODERN SPECIES	7	dpm1 (ENSOMYG00000042561)	ENSOMYG00000055413	TAF13 (ENSOMYG00000072745)	tnnc2.2 (ENSOMYG00000042545)	ENSOMYG00000056355	ENSOMYG00000076369	ENSOMYG00000050747	ENSOMYG00000073201	ENSOMYG00000075564	ENSOMYG00000057288	ENSOMYG00000077363	ENSOMYG00000077195	ENSOMYG00000068341	ENSOMYG00000059694	ENSOMYG00000028194	ENSOMYG00000042292 #22	ENSOMYG00000041899 #23	ENSOMYG00000041874	ENSOMYG00000041872	ENSOMYG00000074430	ENSOMYG00000050917	ENSOMYG00000041867	ENSOMYG00000069629	ENSOMYG00000041859	ENSOMYG00000041850	ENSOMYG00000041818	ENSOMYG00000059041	id1 (ENSOMYG00000041786)	mrgbp (ENSOMYG00000041780)	sulf2b (ENSOMYG00000040949)	ENSOMYG00000040882
Salmo	ANCESTRAL SPECIES	4	ENSGT00940000153311.a.a.b.c	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a.q.a.a	ENSGT00950000183056.B.a.h.b	ENSGT00390000002407.c.i.b	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.f	ENSGT00940000158950.n	ENSGT00950000183211.a.a.a.gb	ENSGT00530000063631.b.n.b.b	ENSGT00940000153481.B.f.b	ENSGT00510000048078.d	ENSGT00390000012981.b	ENSGT00940000153541.C.a.b.b.b	ENSGT00940000153541.C.a.a	ENSGT00940000167093.f	ENSGT00940000156060.dc.b #22	ENSGT00940000159085.h #23	ENSGT00390000003093.e	ENSGT00940000167423.b	ENSGT00950000183062.a.b.a.f	ENSGT00940000163908	ENSGT00940000157212.A.b	ENSGT00940000159657.d.g.a.b	ENSGT01100000263518.B.b.a.a.b	ENSGT00940000157078.i.a.a.b	ENSGT00530000063759.b.a	ENSGT00940000156478.g.a	ENSGT00940000161109.m.b	ENSGT00390000007823.r	ENSGT00940000159151.g.b	ENSGT00940000164502.a.a.d
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000063773	ENSSSAG00000087171	ENSSSAG00000081919	cox4i2 (ENSSSAG00000063792)	ENSSSAG00000084727	ENSSSAG00000063889	pard6b (ENSSSAG00000120594)	adnpb (ENSSSAG00000117086)	dpm1 (ENSSSAG00000111086)	ENSSSAG00000089871	slc35c2 (ENSSSAG00000066512)	taf13 (ENSSSAG00000096831)	tnnc2.2 (ENSSSAG00000066537)	ENSSSAG00000095139	ENSSSAG00000008745	lamb2 (ENSSSAG00000066811) #22	ENSSSAG00000072681 #23	ENSSSAG00000075874	ENSSSAG00000086031	ENSSSAG00000088052	ENSSSAG00000075877	ENSSSAG00000075878	ptn7 (ENSSSAG00000075881)	ENSSSAG00000052796	GPR37L1 (ENSSSAG00000004156)	ENSSSAG00000005634	ENSSSAG00000088387	ENSSSAG00000069900	ENSSSAG00000120279	ENSSSAG00000069972	mrgbp (ENSSSAG00000120238)
River trout	MODERN SPECIES	23	nsfl1c (ENSSTUG00000034634)	ENSSTUG00000034563	nsfl1c (ENSSTUG00000034537)	ENSSTUG00000034526	ENSSTUG00000034520	cox4i2 (ENSSTUG00000034482)	bcl2l1 (ENSSTUG00000034465)	ARFGEF2 (ENSSTUG00000031384)	pard6b (ENSSTUG00000031272)	adnpb (ENSSTUG00000031259)	dpm1 (ENSSTUG00000031230)	slc35c2 (ENSSTUG00000031186)	taf13 (ENSSTUG00000031179)	tnnc2.2 (ENSSTUG00000031156)	ENSSTUG00000031146	lamb2 (ENSSTUG00000029210) #22	USP19 (ENSSTUG00000028807) #23	ENSSTUG00000028750	ENSSTUG00000028738	ENSSTUG00000028727	ENSSTUG00000028719	ENSSTUG00000028680	arl8a (ENSSTUG00000028662)	GPR37L1 (ENSSTUG00000028639)	itpr3 (ENSSTUG00000028286)	snx21 (ENSSTUG00000028271)	hm13 (ENSSTUG00000027185)	ID1 (ENSSTUG00000027120)	mrgbp (ENSSTUG00000027106)	ENSSTUG00000027105	sulf2b (ENSSTUG00000026948)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000156060.ec #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000156060.ec #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000156060.ec #22
River trout	MODERN SPECIES	15	ENSSTUG00000009351	ddt (ENSSTUG00000009355)	chchd10 (ENSSTUG00000009366)	ENSSTUG00000009373	smarcb1b (ENSSTUG00000009408)	ENSSTUG00000009512	RALGDS (ENSSTUG00000009533)	TBC1D13 (ENSSTUG00000009725)	zer1 (ENSSTUG00000010071)	PTGES2 (ENSSTUG00000010131)	p2rx4a (ENSSTUG00000010155)	ppp6c (ENSSTUG00000010278)	SCAI (ENSSTUG00000010309)	arpc5lb (ENSSTUG00000010719)	rpl35 (ENSSTUG00000010753)	ENSSTUG00000010763 #22	ENSSTUG00000010777	gpr107 (ENSSTUG00000010800)	fpgs (ENSSTUG00000010958)	ENSSTUG00000012902	ENSSTUG00000012952	ENSSTUG00000012981	ENSSTUG00000012998	lmo4a (ENSSTUG00000013015)	ENSSTUG00000013026	ccn1l1 (ENSSTUG00000013028)	pole3 (ENSSTUG00000013038)	rpl12 (ENSSTUG00000013074)	ENSSTUG00000013137	lrsam1 (ENSSTUG00000013165)	ENSSTUG00000013659
Huchen	DUPLICATION
Huchen	MODERN SPECIES	8860																ENSHHUG00000000736 #22
Huchen	MODERN SPECIES	7965																ENSHHUG00000022258 #22
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423
Cod	MODERN SPECIES		ENSGMOG00000017312	adnpb (ENSGMOG00000022489)	dpm1 (ENSGMOG00000017282)	ENSGMOG00000017176	taf13 (ENSGMOG00000019815)	ENSGMOG00000020318	ENSGMOG00000031480	ENSGMOG00000025328	ENSGMOG00000026562	ENSGMOG00000029880	ENSGMOG00000033428	ENSGMOG00000022258	ENSGMOG00000031159	ENSGMOG00000000049	ENSGMOG00000025370	lamb2 (ENSGMOG00000018125) #22	ENSGMOG00000018066 #23	ENSGMOG00000022549	ENSGMOG00000018019	ENSGMOG00000025575	ENSGMOG00000036253	klf15 (ENSGMOG00000029284)	ENSGMOG00000003013	ENSGMOG00000035194	ENSGMOG00000024495	ENSGMOG00000015609	ENSGMOG00000028882	ENSGMOG00000035687	ENSGMOG00000014123	xkr7b (ENSGMOG00000033830)	ENSGMOG00000025028
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00990000204792	ENSGT00940000163299.B.b.b.h	ENSGT00940000155987.b	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a
Pinecone sodierfish	MODERN SPECIES	21	nsfl1c (ENSMMDG00005018553)	FAM110A (ENSMMDG00005018551)	cox4i2 (ENSMMDG00005018550)	bcl2l1 (ENSMMDG00005018549)	ARFGEF2 (ENSMMDG00005017890)	pard6b (ENSMMDG00005017852)	adnpb (ENSMMDG00005017847)	dpm1 (ENSMMDG00005017844)	ENSMMDG00005017839	slc35c2 (ENSMMDG00005017834)	taf13 (ENSMMDG00005017831)	tnnc2.2 (ENSMMDG00005017826)	TNNC2 (ENSMMDG00005017825)	ENSMMDG00005017823	ENSMMDG00005006742	lamb2 (ENSMMDG00005006604) #22	USP19 (ENSMMDG00005006417) #23	ENSMMDG00005006399	ENSMMDG00005006397	ENSMMDG00005006393	pim1 (ENSMMDG00005006390)	gss (ENSMMDG00005006389)	gss (ENSMMDG00005005989)	zgc:103759 (ENSMMDG00005005979)	ARHGAP4 (ENSMMDG00005005974)	cav4b (ENSMMDG00005005970)	fam50a (ENSMMDG00005005965)	sars1 (ENSMMDG00005005953)	ENSMMDG00005005949	tmem106c (ENSMMDG00005005945)	ENSMMDG00005005939
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00990000204792	ENSGT00940000163299.B.b.b.h	ENSGT00940000155987.b	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a
Tiger tail seahorse	MODERN SPECIES	90	tmem115 (ENSHCOG00000006784)	ENSHCOG00000006796 ##14	sema3h (ENSHCOG00000006845)	borcs6 (ENSHCOG00000006867)	si:dkey-72l14.3 (ENSHCOG00000006901)	xpc (ENSHCOG00000007000)	arih2 (ENSHCOG00000007052) #31	impdh2 (ENSHCOG00000007092) #26	dalrd3 (ENSHCOG00000000220) #28	CELSR3 (ENSHCOG00000007217) #37	wdr6 (ENSHCOG00000000243) #29	SLC26A6 (ENSHCOG00000007383)	mgll (ENSHCOG00000000842)	prkar2aa (ENSHCOG00000007418) #34	ENSHCOG00000007425	lamb2 (ENSHCOG00000007527) #22	USP19 (ENSHCOG00000007580) #23	ENSHCOG00000007594	ENSHCOG00000007608	ENSHCOG00000007618	pim1 (ENSHCOG00000007630)	gss (ENSHCOG00000007655)	gss (ENSHCOG00000007665)	gss (ENSHCOG00000007688)	ENSHCOG00000007702	gss (ENSHCOG00000007722)	zgc:103759 (ENSHCOG00000007730)	ENSHCOG00000007759	ENSHCOG00000007769	fam50a (ENSHCOG00000007785)	ENSHCOG00000007795
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Tetraodontidae	ANCESTRAL SPECIES	82						ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00940000156669.a	ENSGT00940000153792.B
Fugu	MODERN SPECIES	15	ENSTRUG00000028128	ENSTRUG00000033463	bcl2l1 (ENSTRUG00000030575)	ARFGEF2 (ENSTRUG00000005014)	ENSTRUG00000032204	PARD6B (ENSTRUG00000029210)	adnpb (ENSTRUG00000024563)	dpm1 (ENSTRUG00000023748)	ENSTRUG00000004255	taf13 (ENSTRUG00000029448)	TNNC2 (ENSTRUG00000026617)	ENSTRUG00000005920	ENSTRUG00000028188	ENSTRUG00000003492	ENSTRUG00000001981	lamb2 (ENSTRUG00000002301) #22	USP19 (ENSTRUG00000004736) #23	ENSTRUG00000023351	ENSTRUG00000030628	ENSTRUG00000005231	ENSTRUG00000024517	ENSTRUG00000005431	pim1 (ENSTRUG00000005490)	ENSTRUG00000021910	gss (ENSTRUG00000005800)	zgc:103759 (ENSTRUG00000006215)	ARHGAP4 (ENSTRUG00000006232)	fam50a (ENSTRUG00000006877)	ENSTRUG00000020207	sars1 (ENSTRUG00000007166)	ENSTRUG00000027280
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000000634	APBA1 (ENSTNIG00000003636)	rflna (ENSTNIG00000003637)	ncor2 (ENSTNIG00000003638)	EP400 (ENSTNIG00000003639)	ENSTNIG00000001320	slc35c2 (ENSTNIG00000002525)	taf13 (ENSTNIG00000002526)	TNNC2 (ENSTNIG00000019679)	ENSTNIG00000000762	ENSTNIG00000002527	ENSTNIG00000002531 #22	GMEB2 (ENSTNIG00000002528)	uxt (ENSTNIG00000002529)	ELK1 (ENSTNIG00000002530)	lamb2 (ENSTNIG00000002532) #22	ENSTNIG00000003188	ENSTNIG00000002533	reep3b (ENSTNIG00000003517)	rab3gap1 (ENSTNIG00000005890)	ccdc57 (ENSTNIG00000005891)	slc16a3b (ENSTNIG00000003785)	tfam (ENSTNIG00000003786)	ipmkb (ENSTNIG00000003787)	ENSTNIG00000006081	ENSTNIG00000000216	ca10a (ENSTNIG00000006082)	KCNJ10 (ENSTNIG00000006226)	tppp2 (ENSTNIG00000006227)	ENSTNIG00000006228	ENSTNIG00000003230
Tetraodon	MODERN SPECIES	26	ENSTNIG00000005513	BIRC6 (ENSTNIG00000005514)	yipf4 (ENSTNIG00000005515)	exo1 (ENSTNIG00000004361)	ENSTNIG00000000634	APBA1 (ENSTNIG00000003636)	rflna (ENSTNIG00000003637)	ncor2 (ENSTNIG00000003638)	EP400 (ENSTNIG00000003639)	ENSTNIG00000001320	slc35c2 (ENSTNIG00000002525)	taf13 (ENSTNIG00000002526)	TNNC2 (ENSTNIG00000019679)	ENSTNIG00000000762	ENSTNIG00000002527	ENSTNIG00000002531 #22	GMEB2 (ENSTNIG00000002528)	uxt (ENSTNIG00000002529)	ELK1 (ENSTNIG00000002530)	lamb2 (ENSTNIG00000002532) #22	ENSTNIG00000003188	ENSTNIG00000002533	reep3b (ENSTNIG00000003517)	rab3gap1 (ENSTNIG00000005890)	ccdc57 (ENSTNIG00000005891)	slc16a3b (ENSTNIG00000003785)	tfam (ENSTNIG00000003786)	ipmkb (ENSTNIG00000003787)	ENSTNIG00000006081	ENSTNIG00000000216	ca10a (ENSTNIG00000006082)
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Ballan wrasse	MODERN SPECIES	77	tnnc2.2 (ENSLBEG00000021151)	taf13 (ENSLBEG00000021134)	ENSLBEG00000021002	dpm1 (ENSLBEG00000020846)	adnpb (ENSLBEG00000020828)	pard6b (ENSLBEG00000020815)	ARFGEF2 (ENSLBEG00000020734)	bcl2l1 (ENSLBEG00000020691)	cox4i2 (ENSLBEG00000020649)	FAM110A (ENSLBEG00000020628)	nsfl1c (ENSLBEG00000020596)	fkbp1ab (ENSLBEG00000020566)	sdcbp2 (ENSLBEG00000020459)	SNPH (ENSLBEG00000020417)	ENSLBEG00000020337	lamb2 (ENSLBEG00000020210) #22	USP19 (ENSLBEG00000020050) #23	ENSLBEG00000019979	ENSLBEG00000019955	ENSLBEG00000019885	ENSLBEG00000019851	pim1 (ENSLBEG00000019813)	gss (ENSLBEG00000019758)	zgc:103759 (ENSLBEG00000019727)	ARHGAP4 (ENSLBEG00000019647)	cav4b (ENSLBEG00000019612)	fam50a (ENSLBEG00000019556)	ENSLBEG00000019516	sars1 (ENSLBEG00000019469)	ENSLBEG00000019451	tmem106c (ENSLBEG00000019417)
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Perciformes	ANCESTRAL SPECIES	4	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a	ENSGT00940000163961.a.a.b
Channel bull blenny	MODERN SPECIES	21	FAM110A (ENSCGOG00000015494)	cox4i2 (ENSCGOG00000015492)	ENSCGOG00000015490	bcl2l1 (ENSCGOG00000015487)	ARFGEF2 (ENSCGOG00000014537)	pard6b (ENSCGOG00000014515)	adnpb (ENSCGOG00000014514)	dpm1 (ENSCGOG00000014506)	ENSCGOG00000014308	taf13 (ENSCGOG00000014303)	tnnc2.2 (ENSCGOG00000014242)	TNNC2 (ENSCGOG00000014234)	ENSCGOG00000014231	ENSCGOG00000014215	ENSCGOG00000012610	lamb2 (ENSCGOG00000011924) #22	USP19 (ENSCGOG00000010456) #23	ENSCGOG00000010413	ENSCGOG00000010409	ENSCGOG00000010406	pim1 (ENSCGOG00000010401)	gss (ENSCGOG00000010196)	zgc:103759 (ENSCGOG00000010188)	ARHGAP4 (ENSCGOG00000009369)	cav4b (ENSCGOG00000009323)	fam50a (ENSCGOG00000008439)	sars1 (ENSCGOG00000008038)	ENSCGOG00000008026	tmem106c (ENSCGOG00000008023)	ENSCGOG00000007916	krt18a.2 (ENSCGOG00000007903)
Pike perch	MODERN SPECIES	7	FAM110A (ENSSLUG00000000961)	cox4i2 (ENSSLUG00000000964)	bcl2l1 (ENSSLUG00000000966)	ARFGEF2 (ENSSLUG00000001182)	pard6b (ENSSLUG00000004861)	adnpb (ENSSLUG00000004864)	dpm1 (ENSSLUG00000004871)	ENSSLUG00000004886	slc35c2 (ENSSLUG00000004897)	taf13 (ENSSLUG00000004914)	tnnc2.2 (ENSSLUG00000004919)	TNNC2 (ENSSLUG00000004928)	ENSSLUG00000004940	ENSSLUG00000004963	ENSSLUG00000005415	lamb2 (ENSSLUG00000011545) #22	USP19 (ENSSLUG00000019677) #23	ENSSLUG00000019697	ENSSLUG00000019699	ENSSLUG00000019706	ENSSLUG00000019708	pim1 (ENSSLUG00000019715)	gss (ENSSLUG00000019731)	zgc:103759 (ENSSLUG00000019778)	ARHGAP4 (ENSSLUG00000019783)	cav4b (ENSSLUG00000019790)	fam50a (ENSSLUG00000019797)	sars1 (ENSSLUG00000019815)	ENSSLUG00000019825	tmem106c (ENSSLUG00000019827)	ENSSLUG00000019866
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000153311.a.a.b	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281	ENSGT00940000163886.B.b.a
Lumpfish	MODERN SPECIES	22	fkbp1ab (ENSCLMG00005016564)	nsfl1c (ENSCLMG00005016563)	FAM110A (ENSCLMG00005016562)	cox4i2 (ENSCLMG00005016561)	bcl2l1 (ENSCLMG00005016560)	ARFGEF2 (ENSCLMG00005012168)	pard6b (ENSCLMG00005012148)	adnpb (ENSCLMG00005012146)	dpm1 (ENSCLMG00005012142)	ENSCLMG00005012139	taf13 (ENSCLMG00005012138)	tnnc2.2 (ENSCLMG00005012137)	TNNC2 (ENSCLMG00005012136)	ENSCLMG00005012135	ENSCLMG00005010472	lamb2 (ENSCLMG00005009606) #22	USP19 (ENSCLMG00005009366) #23	ENSCLMG00005009355	ENSCLMG00005009354	ENSCLMG00005009353	ENSCLMG00005009352	pim1 (ENSCLMG00005009341)	gss (ENSCLMG00005008667)	zgc:103759 (ENSCLMG00005008655)	ARHGAP4 (ENSCLMG00005008649)	cav4b (ENSCLMG00005008645)	fam50a (ENSCLMG00005008630)	ENSCLMG00005008623	sars1 (ENSCLMG00005008612)	ENSCLMG00005008610	tmem106c (ENSCLMG00005008609)
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	11	ENSGACG00000004304	cox4i2 (ENSGACG00000004286)	bcl2l1 (ENSGACG00000004283)	ARFGEF2 (ENSGACG00000004260)	pard6b (ENSGACG00000004259)	adnpb (ENSGACG00000004256)	dpm1 (ENSGACG00000004245)	ENSGACG00000004244	ENSGACG00000004216	taf13 (ENSGACG00000004213)	tnnc2.2 (ENSGACG00000004198)	TNNC2 (ENSGACG00000004196)	ENSGACG00000004193	ENSGACG00000004190 #22	ENSGACG00000004187	lamb2 (ENSGACG00000004167) #22	USP19 (ENSGACG00000004155) #23	ENSGACG00000004152	zp3f.1 (ENSGACG00000004144)	pim1 (ENSGACG00000004133)	gss (ENSGACG00000004127)	zgc:103759 (ENSGACG00000004125)	ENSGACG00000004120	ENSGACG00000004115	ENSGACG00000004113	fam50a (ENSGACG00000004087)	ENSGACG00000004085	sars1 (ENSGACG00000004044)	ENSGACG00000004040	tmem106c (ENSGACG00000004023)	ENSGACG00000004001
Stickleback	MODERN SPECIES	11	fkbp1ab (ENSGACG00000004338)	nsfl1c (ENSGACG00000004309)	ENSGACG00000004304	cox4i2 (ENSGACG00000004286)	bcl2l1 (ENSGACG00000004283)	ARFGEF2 (ENSGACG00000004260)	pard6b (ENSGACG00000004259)	adnpb (ENSGACG00000004256)	dpm1 (ENSGACG00000004245)	ENSGACG00000004244	ENSGACG00000004216	taf13 (ENSGACG00000004213)	tnnc2.2 (ENSGACG00000004198)	TNNC2 (ENSGACG00000004196)	ENSGACG00000004193	ENSGACG00000004190 #22	ENSGACG00000004187	lamb2 (ENSGACG00000004167) #22	USP19 (ENSGACG00000004155) #23	ENSGACG00000004152	zp3f.1 (ENSGACG00000004144)	pim1 (ENSGACG00000004133)	gss (ENSGACG00000004127)	zgc:103759 (ENSGACG00000004125)	ENSGACG00000004120	ENSGACG00000004115	ENSGACG00000004113	fam50a (ENSGACG00000004087)	ENSGACG00000004085	sars1 (ENSGACG00000004044)	ENSGACG00000004040
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000153311.a.a.b	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Gilthead seabream	MODERN SPECIES	21	sdcbp2 (ENSSAUG00010018015)	fkbp1ab (ENSSAUG00010018013)	nsfl1c (ENSSAUG00010018007)	FAM110A (ENSSAUG00010018004)	Cox4b (ENSSAUG00010018002)	bcl2l1 (ENSSAUG00010018001)	ARFGEF2 (ENSSAUG00010017400)	pard6b (ENSSAUG00010017393)	adnpb (ENSSAUG00010017391)	dpm1 (ENSSAUG00010017390)	ENSSAUG00010017386	taf13 (ENSSAUG00010017377)	TNNC2 (ENSSAUG00010017373)	ENSSAUG00010017372	ENSSAUG00010017123	lamb2 (ENSSAUG00010010651) #22	USP19 (ENSSAUG00010005997) #23	ENSSAUG00010005923	ENSSAUG00010005921	ENSSAUG00010005918	ENSSAUG00010005905	pim1 (ENSSAUG00010005904)	ENSSAUG00010005902	gss (ENSSAUG00010005886)	gss (ENSSAUG00010004984)	zgc:103759 (ENSSAUG00010004964)	ARHGAP4 (ENSSAUG00010004950)	cav4b (ENSSAUG00010004940)	fam50a (ENSSAUG00010004933)	sars1 (ENSSAUG00010004918)	ENSSAUG00010004909
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000153311.a.a.b	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
European seabass	DUPLICATION
European seabass	MODERN SPECIES	13	ENSDLAG00005020893	tubb2b (ENSDLAG00005028428)	ENSDLAG00005020898	ENSDLAG00005020905	ENSDLAG00005028139	ENSDLAG00005034611	ADGRD2 (ENSDLAG00005020947)	NR5A1 (ENSDLAG00005020977)	nr6a1a (ENSDLAG00005021108)	OLFML2A (ENSDLAG00005021279)	ENSDLAG00005033531	ENSDLAG00005021295	GOLGA1 (ENSDLAG00005021316)	ENSDLAG00005031828	PPP6C (ENSDLAG00005021350)	ENSDLAG00005028754 #22	ENSDLAG00005021366	ENSDLAG00005021390	dph7 (ENSDLAG00005021410)	ENSDLAG00005021413	PNPLA7 (ENSDLAG00005021504)	zgc:64051 (ENSDLAG00005023336)	ENSDLAG00005032856	ENSDLAG00005029682	ENSDLAG00005023442	tncb (ENSDLAG00005023590)	ENSDLAG00005031214	ENSDLAG00005023605	ENSDLAG00005031471	ENSDLAG00005006174	nsmfb (ENSDLAG00005023611)
European seabass	MODERN SPECIES	14	sdcbp2 (ENSDLAG00005027056)	fkbp1ab (ENSDLAG00005031512)	nsfl1c (ENSDLAG00005020616)	cox4i2 (ENSDLAG00005020602)	ENSDLAG00005032367	ENSDLAG00005018721	pard6b (ENSDLAG00005018650)	adnpb (ENSDLAG00005018641)	dpm1 (ENSDLAG00005031635)	ENSDLAG00005018594	taf13 (ENSDLAG00005018587)	tnnc2.2 (ENSDLAG00005018570)	ENSDLAG00005018564	ENSDLAG00005018516	ENSDLAG00005017393	lamb2 (ENSDLAG00005015097) #22	ENSDLAG00005012381 #23	ENSDLAG00005030081	ENSDLAG00005032818	ENSDLAG00005012265	ENSDLAG00005012255	pim1 (ENSDLAG00005012233)	ENSDLAG00005012020	ENSDLAG00005028621	ENSDLAG00005011887	fam50a (ENSDLAG00005027522)	ENSDLAG00005032227	sars1 (ENSDLAG00005011775)	ENSDLAG00005011764	ENSDLAG00005010911	krt18a.2 (ENSDLAG00005010873)
Large yellow croaker	DUPLICATION
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005001686	ENSLCRG00005001680	ENSLCRG00005001675	ENSLCRG00005001629	ENSLCRG00005001622	ENSLCRG00005001607	lhx2b (ENSLCRG00005001597)	ADGRD2 (ENSLCRG00005001548)	nr5a1a (ENSLCRG00005020785)	nr6a1a (ENSLCRG00005020780)	olfml2a (ENSLCRG00005020778)	ENSLCRG00005020776	rpl35 (ENSLCRG00005020775)	golga1 (ENSLCRG00005020762)	PPP6C (ENSLCRG00005020759)	ENSLCRG00005020757 #22	ENSLCRG00005020755	SH3GLB2 (ENSLCRG00005020493)	dph7 (ENSLCRG00005020485)	mrpl41 (ENSLCRG00005020484)	PNPLA7 (ENSLCRG00005019404)	nsmfb (ENSLCRG00005019379)	ENSLCRG00005019371	ENSLCRG00005019370	tncb (ENSLCRG00005019295)	ENSLCRG00005019293	TRAF2 (ENSLCRG00005019261)	RABL6 (ENSLCRG00005019257)	imp4 (ENSLCRG00005019255)	araf (ENSLCRG00005019114)	zgc:64051 (ENSLCRG00005019111)
Large yellow croaker	MODERN SPECIES	487	fkbp1ab (ENSLCRG00005011630)	nsfl1c (ENSLCRG00005011606)	FAM110A (ENSLCRG00005011598)	cox4i2 (ENSLCRG00005011584)	bcl2l1 (ENSLCRG00005011561)	ARFGEF2 (ENSLCRG00005004471)	pard6b (ENSLCRG00005003461)	adnpb (ENSLCRG00005003437)	dpm1 (ENSLCRG00005023739)	ENSLCRG00005023737	taf13 (ENSLCRG00005023735)	tnnc2.2 (ENSLCRG00005023734)	TNNC2 (ENSLCRG00005023733)	ENSLCRG00005023732	ENSLCRG00005023656	lamb2 (ENSLCRG00005023414) #22	USP19 (ENSLCRG00005023008) #23	ENSLCRG00005022994	ENSLCRG00005022993	ENSLCRG00005022990	ENSLCRG00005022989	pim1 (ENSLCRG00005022988)	ENSLCRG00005022979	ENSLCRG00005022977	gss (ENSLCRG00005022974)	gss (ENSLCRG00005022913)	zgc:103759 (ENSLCRG00005022899)	ARHGAP4 (ENSLCRG00005022897)	cav4b (ENSLCRG00005022894)	fam50a (ENSLCRG00005022891)	ENSLCRG00005022890
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Carangaria	ANCESTRAL SPECIES	2	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Pleuronectoidei	ANCESTRAL SPECIES	14	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Turbot	MODERN SPECIES	2	nsfl1c (ENSSMAG00000002144)	ENSSMAG00000002174	cox4i2 (ENSSMAG00000002180)	bcl2l1 (ENSSMAG00000002209)	ENSSMAG00000002234	pard6b (ENSSMAG00000032961)	ENSSMAG00000022519	adnpb (ENSSMAG00000021496)	dpm1 (ENSSMAG00000002340)	ENSSMAG00000002356	taf13 (ENSSMAG00000002486)	tnnc2.2 (ENSSMAG00000002492)	ENSSMAG00000002506	ENSSMAG00000003937	ENSSMAG00000003987	lamb2 (ENSSMAG00000004069) #22	ENSSMAG00000004194 #23	ENSSMAG00000021665	ENSSMAG00000004387	ENSSMAG00000004413	ENSSMAG00000004432	ENSSMAG00000004449	ENSSMAG00000004588	ENSSMAG00000036809	ENSSMAG00000036716	ENSSMAG00000037690	ENSSMAG00000004467	ENSSMAG00000004611	ENSSMAG00000004634	ENSSMAG00000004761	fam50a (ENSSMAG00000004771)
Carangaria_A	ANCESTRAL SPECIES	54	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296
Seriola	ANCESTRAL SPECIES	118	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296
Greater amberjack	MODERN SPECIES	141	fkbp1ab (ENSSDUG00000018391)	nsfl1c (ENSSDUG00000018355)	FAM110A (ENSSDUG00000018347)	cox4i2 (ENSSDUG00000018332)	bcl2l1 (ENSSDUG00000018324)	ARFGEF2 (ENSSDUG00000018266)	pard6b (ENSSDUG00000018254)	adnpb (ENSSDUG00000018248)	dpm1 (ENSSDUG00000018236)	ENSSDUG00000018151	taf13 (ENSSDUG00000018133)	tnnc2.2 (ENSSDUG00000018086)	ENSSDUG00000018074	ENSSDUG00000018052	ENSSDUG00000017978	lamb2 (ENSSDUG00000017883) #22	USP19 (ENSSDUG00000017837) #23	ENSSDUG00000017818	ENSSDUG00000017803	ENSSDUG00000017773	ENSSDUG00000017765
Yellowtail amberjack	MODERN SPECIES	2946	nsfl1c (ENSSLDG00000015771)	FAM110A (ENSSLDG00000015807)	cox4i2 (ENSSLDG00000015819)	bcl2l1 (ENSSLDG00000015833)	ARFGEF2 (ENSSLDG00000015873)	pard6b (ENSSLDG00000015930)	adnpb (ENSSLDG00000015942)	dpm1 (ENSSLDG00000015954)	ENSSLDG00000016003	tnnc2.2 (ENSSLDG00000016084)	taf13 (ENSSLDG00000016107)	TNNC2 (ENSSLDG00000016118)	ENSSLDG00000016128	ENSSLDG00000016140	ENSSLDG00000016177	lamb2 (ENSSLDG00000016256) #22	USP19 (ENSSLDG00000016354) #23	ENSSLDG00000016468	ENSSLDG00000016500
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	95	ENSLCAG00010027194	ccn1l2 (ENSLCAG00010027198)	ENSLCAG00010027204	ENSLCAG00010027206	tubb2b (ENSLCAG00010027211)	ENSLCAG00010027216	FPGS (ENSLCAG00010027220)	ENSLCAG00010027224	lhx2b (ENSLCAG00010027228)	ENSLCAG00010027230	nr5a1a (ENSLCAG00010027244)	nr6a1a (ENSLCAG00010027256)	olfml2a (ENSLCAG00010027266)	ENSLCAG00010027272	golga1 (ENSLCAG00010027286)	ENSLCAG00010027294 #22	PPP6C (ENSLCAG00010027298)	ENSLCAG00010027304	sh3glb2a (ENSLCAG00010027311)	zfr (ENSLCAG00010027324)	ENSLCAG00010027333	ENSLCAG00010027334	npr3 (ENSLCAG00010027335)	ENSLCAG00010027337	ENSLCAG00010027345	TRAF2 (ENSLCAG00010027349)	tncb (ENSLCAG00010027360)	ENSLCAG00010027370	ENSLCAG00010027372	nsmfb (ENSLCAG00010027375)	ENSLCAG00010027377
Barramundi perch	MODERN SPECIES	15	fkbp1ab (ENSLCAG00010000896)	nsfl1c (ENSLCAG00010000889)	FAM110A (ENSLCAG00010000885)	cox4i2 (ENSLCAG00010000883)	bcl2l1 (ENSLCAG00010000879)	ARFGEF2 (ENSLCAG00010000506)	pard6b (ENSLCAG00010026869)	adnpb (ENSLCAG00010026867)	dpm1 (ENSLCAG00010026865)	slc35c2 (ENSLCAG00010026862)	taf13 (ENSLCAG00010026859)	tnnc2.2 (ENSLCAG00010026857)	ENSLCAG00010026854	ENSLCAG00010026853	ENSLCAG00010026824	lamb2 (ENSLCAG00010026522) #22	USP19 (ENSLCAG00010026179) #23	ENSLCAG00010026057	ENSLCAG00010026056	ENSLCAG00010026054	ENSLCAG00010026053	epcam (ENSLCAG00010026049)	PLEKHH2 (ENSLCAG00010026010)	THADA (ENSLCAG00010025998)	zfp36l2 (ENSLCAG00010025996)	ENSLCAG00010025994
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000153311.a.a.b	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000163299.A.b.c.a	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Siamese fighting fish	MODERN SPECIES	9	ENSBSLG00000016577	FKBP15 (ENSBSLG00000015632)	ENSBSLG00000015576	tubb2b (ENSBSLG00000015516)	ENSBSLG00000015484	lhx2b (ENSBSLG00000015462)	ENSBSLG00000015451	ENSBSLG00000015432	nr5a1a (ENSBSLG00000015205)	nr6a1a (ENSBSLG00000014740)	olfml2a (ENSBSLG00000014715)	ENSBSLG00000014709	rpl35 (ENSBSLG00000024526)	golga1 (ENSBSLG00000024481)	PPP6C (ENSBSLG00000024443)	ENSBSLG00000024421 #22	ENSBSLG00000024337	SH3GLB2 (ENSBSLG00000024138)	zfr (ENSBSLG00000023503)	ENSBSLG00000023431	sub1b (ENSBSLG00000023428)	npr3 (ENSBSLG00000023421)	ENSBSLG00000023418	golph3a (ENSBSLG00000023413)	ENSBSLG00000023408	isl1a (ENSBSLG00000023404)	ccdc125 (ENSBSLG00000023396)	rad17 (ENSBSLG00000023383)	zgc:86811 (ENSBSLG00000023380)	ydjc (ENSBSLG00000023378)	ube2l3b (ENSBSLG00000023373)
Climbing perch	MODERN SPECIES	20	fkbp1ab (ENSATEG00000000780)	nsfl1c (ENSATEG00000000786)	ENSATEG00000000842	cox4i2 (ENSATEG00000025472)	bcl2l1 (ENSATEG00000000873)	ENSATEG00000000879	pard6b (ENSATEG00000030138)	adnpb (ENSATEG00000000895)	dpm1 (ENSATEG00000000901)	ENSATEG00000000919	taf13 (ENSATEG00000001114)	tnnc2.2 (ENSATEG00000001118)	ENSATEG00000001128	ENSATEG00000001162	ENSATEG00000001314	lamb2 (ENSATEG00000001347) #22	ENSATEG00000001547 #23	ENSATEG00000001683	ENSATEG00000001694	ENSATEG00000001701	ENSATEG00000001713	ENSATEG00000001736	ENSATEG00000001928	ENSATEG00000025225	ENSATEG00000001995	ENSATEG00000002012	fam50a (ENSATEG00000002029)	ENSATEG00000002076	sars1 (ENSATEG00000002081)	ENSATEG00000002123	ENSATEG00000002150
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000018745	ENSMAMG00000024865	ENSMAMG00000018796	ENSMAMG00000028722	ENSMAMG00000018806	ENSMAMG00000018972	ENSMAMG00000018974	ENSMAMG00000018991	NR5A1 (ENSMAMG00000018995)	NR6A1 (ENSMAMG00000019017)	OLFML2A (ENSMAMG00000019044)	ENSMAMG00000019066	RPL35 (ENSMAMG00000019074)	GOLGA1 (ENSMAMG00000019096)	PPP6C (ENSMAMG00000019206)	ENSMAMG00000019223 #22	ENSMAMG00000019229	ENSMAMG00000019244	dph7 (ENSMAMG00000019299)	ENSMAMG00000019315	PNPLA7 (ENSMAMG00000019330)	ENSMAMG00000019419	zgc:64051 (ENSMAMG00000019438)	araf (ENSMAMG00000019460)	imp4 (ENSMAMG00000019500)	ENSMAMG00000019516	ENSMAMG00000019546	ENSMAMG00000019582	ENSMAMG00000024552	ENSMAMG00000019751	ENSMAMG00000019758
Zig-zag eel	MODERN SPECIES	21	nsfl1c (ENSMAMG00000016630)	ENSMAMG00000028297	ENSMAMG00000016661	cox4i2 (ENSMAMG00000016662)	bcl2l1 (ENSMAMG00000016668)	ENSMAMG00000016675	pard6b (ENSMAMG00000026219)	adnpb (ENSMAMG00000016754)	dpm1 (ENSMAMG00000016768)	slc35c2 (ENSMAMG00000026439)	taf13 (ENSMAMG00000016865)	tnnc2.2 (ENSMAMG00000016870)	ENSMAMG00000027236	ENSMAMG00000016901	ENSMAMG00000017025	lamb2 (ENSMAMG00000017038) #22	ENSMAMG00000017077 #23	ENSMAMG00000017100	ENSMAMG00000017102	ENSMAMG00000017114	ENSMAMG00000026293	ENSMAMG00000000411	ENSMAMG00000000458	ENSMAMG00000024279	ENSMAMG00000026517	ENSMAMG00000000525	ENSMAMG00000000557	ENSMAMG00000000568	ENSMAMG00000000638	ENSMAMG00000000690	ENSMAMG00000000710
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000171106
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Cichlidae	ANCESTRAL SPECIES		ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000017253	ENSGT00390000013764.`b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000017253	ENSGT00390000013764.`b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
Haplochromini	ANCESTRAL SPECIES	18	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000017253	ENSGT00390000013764.`b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
Burton s mouthbrooder	MODERN SPECIES	509	ENSHBUG00000001055	FAM110A (ENSHBUG00000021045)	cox4i2 (ENSHBUG00000021051)	bcl2l1 (ENSHBUG00000021061)	ARFGEF2 (ENSHBUG00000021144)	pard6b (ENSHBUG00000021153)	adnpb (ENSHBUG00000021161)	dpm1 (ENSHBUG00000021185)	ENSHBUG00000021279	slc35c2 (ENSHBUG00000021295)	taf13 (ENSHBUG00000021304)	tnnc2.2 (ENSHBUG00000021338)	TNNC2 (ENSHBUG00000021377)	ENSHBUG00000021389	ENSHBUG00000021710	lamb2 (ENSHBUG00000022125) #22	ENSHBUG00000022145	USP19 (ENSHBUG00000022189) #23	ENSHBUG00000022198	ENSHBUG00000022211
Haplochromini_A	ANCESTRAL SPECIES	36	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000017253	ENSGT00390000013764.`b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
P. nyererei	MODERN SPECIES	442	nsfl1c (ENSPNYG00000009216)	FAM110A (ENSPNYG00000009247)	cox4i2 (ENSPNYG00000009287)	bcl2l1 (ENSPNYG00000009301)	ARFGEF2 (ENSPNYG00000009336)	pard6b (ENSPNYG00000009455)	adnpb (ENSPNYG00000009466)	dpm1 (ENSPNYG00000009474)	ENSPNYG00000009515	slc35c2 (ENSPNYG00000009568)	taf13 (ENSPNYG00000009588)	tnnc2.2 (ENSPNYG00000009596)	TNNC2 (ENSPNYG00000009612)	ENSPNYG00000009671	ENSPNYG00000009834	lamb2 (ENSPNYG00000009920) #22	USP19 (ENSPNYG00000009947) #23	ENSPNYG00000009972	ENSPNYG00000009998
Haplochromini_B	ANCESTRAL SPECIES	57	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000154923.C.x.b	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00940000153541.C.a.b	ENSGT00390000012981	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000017253	ENSGT00390000013764.`b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
Eastern happy	MODERN SPECIES	12	nsfl1c (ENSACLG00000006969)	FAM110A (ENSACLG00000007110)	cox4i2 (ENSACLG00000007120)	bcl2l1 (ENSACLG00000007126)	ARFGEF2 (ENSACLG00000007177)	pard6b (ENSACLG00000007382)	adnpb (ENSACLG00000007395)	ENSACLG00000007430	slc35c2 (ENSACLG00000007457)	tnnc2.2 (ENSACLG00000007470)	taf13 (ENSACLG00000007478)	TNNC2 (ENSACLG00000007485)	ENSACLG00000007501	ENSACLG00000007506	ENSACLG00000007522	lamb2 (ENSACLG00000007558) #22	USP19 (ENSACLG00000007623) #23	ENSACLG00000007653	ENSACLG00000007892	ENSACLG00000008521	ENSACLG00000008664	ENSACLG00000008678	pim1 (ENSACLG00000009026)	MRPL49 (ENSACLG00000009050)	gss (ENSACLG00000009057)	zgc:103759 (ENSACLG00000009116)	ARHGAP4 (ENSACLG00000009145)	cav4b (ENSACLG00000009185)	fam50a (ENSACLG00000009195)	ENSACLG00000009230	sars1 (ENSACLG00000009251)
Zebra mbuna	MODERN SPECIES	1103	FAM110A (ENSMZEG00005022033)	cox4i2 (ENSMZEG00005022037)	bcl2l1 (ENSMZEG00005022040)	ARFGEF2 (ENSMZEG00005022055)	pard6b (ENSMZEG00005022066)	adnpb (ENSMZEG00005022070)	dpm1 (ENSMZEG00005022077)	ENSMZEG00005022088	slc35c2 (ENSMZEG00005022095)	tnnc2.2 (ENSMZEG00005022101)	taf13 (ENSMZEG00005022104)	TNNC2 (ENSMZEG00005022109)	ENSMZEG00005022115	ENSMZEG00005022116	ENSMZEG00005022120	lamb2 (ENSMZEG00005022129) #22	USP19 (ENSMZEG00005022159) #23	ENSMZEG00005022241	ENSMZEG00005022244	ENSMZEG00005022246	ENSMZEG00005022254	ENSMZEG00005022258	ENSMZEG00005022262	ptpn22 (ENSMZEG00005022265)	ENSMZEG00005022272	ENSMZEG00005022276	ENSMZEG00005022281	tmem269 (ENSMZEG00005022285)	ENSMZEG00005022292	ENSMZEG00005022297	ENSMZEG00005022300
Lyretail cichlid	MODERN SPECIES	404	sdcbp2 (ENSNBRG00000020233)	ENSNBRG00000020267	nsfl1c (ENSNBRG00000020284)	FAM110A (ENSNBRG00000020328)	cox4i2 (ENSNBRG00000020340)	bcl2l1 (ENSNBRG00000020345)	ARFGEF2 (ENSNBRG00000020356)	pard6b (ENSNBRG00000020433)	adnpb (ENSNBRG00000020439)	dpm1 (ENSNBRG00000020446)	ENSNBRG00000020468	tnnc2.2 (ENSNBRG00000020563)	taf13 (ENSNBRG00000020603)	ENSNBRG00000020620	ENSNBRG00000020758	lamb2 (ENSNBRG00000020831) #22	USP19 (ENSNBRG00000020936) #23	ENSNBRG00000021106	ENSNBRG00000021121
Nile tilapia	MODERN SPECIES	12	sdcbp2 (ENSONIG00000001641)	fkbp1ab (ENSONIG00000038643)	nsfl1c (ENSONIG00000001637)	FAM110A (ENSONIG00000029169)	cox4i2 (ENSONIG00000027721)	bcl2l1 (ENSONIG00000001632)	ARFGEF2 (ENSONIG00000001628)	pard6b (ENSONIG00000001625)	adnpb (ENSONIG00000001623)	dpm1 (ENSONIG00000001619)	ENSONIG00000001615	taf13 (ENSONIG00000020959)	TNNC2 (ENSONIG00000001611)	ENSONIG00000001605	ENSONIG00000001597	lamb2 (ENSONIG00000001584) #22	USP19 (ENSONIG00000001579) #23	ENSONIG00000031826	ENSONIG00000001578	ENSONIG00000030691	ENSONIG00000028943	pim1 (ENSONIG00000009785)	MRPL49 (ENSONIG00000021419)	gss (ENSONIG00000033686)	zgc:103759 (ENSONIG00000009093)	ARHGAP4 (ENSONIG00000009094)	cav4b (ENSONIG00000009097)	fam50a (ENSONIG00000009098)	ENSONIG00000009099	sars1 (ENSONIG00000009102)	ENSONIG00000009105
Midas cichlid	MODERN SPECIES	436														ENSACIG00000006322	ENSACIG00000006148	lamb2 (ENSACIG00000006087) #22	USP19 (ENSACIG00000006040) #23	ENSACIG00000006024	ENSACIG00000006001	ENSACIG00000005969	pim1 (ENSACIG00000005947)	gss (ENSACIG00000005773)	gss (ENSACIG00000005739)	zgc:103759 (ENSACIG00000005729)	ARHGAP4 (ENSACIG00000005562)	cav4b (ENSACIG00000005534)	fam50a (ENSACIG00000005503)	ENSACIG00000005480	sars1 (ENSACIG00000005454)
Pomacentridae	ANCESTRAL SPECIES	128	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a.bb	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000171469	ENSGT00940000178820	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000163299.A.b.c.a.b	ENSGT00940000166296	ENSGT00940000153394.c.a
Bicolor damselfish	MODERN SPECIES	785				ENSSPAG00000022164	pard6b (ENSSPAG00000022157)	adnpb (ENSSPAG00000022148)	dpm1 (ENSSPAG00000022129)	ENSSPAG00000022032	slc35c2 (ENSSPAG00000022005)	taf13 (ENSSPAG00000022000)	tnnc2.2 (ENSSPAG00000021988)	ENSSPAG00000021965	ENSSPAG00000021960	ENSSPAG00000021876	ENSSPAG00000021785	lamb2 (ENSSPAG00000021693) #22	ENSSPAG00000021680	ENSSPAG00000021673	USP19 (ENSSPAG00000021634) #23	ENSSPAG00000021617
Pomacentridae_A	ANCESTRAL SPECIES	251															ENSGT00940000153582.a.m.a.b.e.a	ENSGT00940000156060 #22	ENSGT00940000171469	ENSGT00940000155841.c.a	ENSGT00390000018644	ENSGT00390000013158.c	ENSGT00940000156763.b.b
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	2340															ENSAPOG00000011972	ENSAPOG00000011978 #22	ENSAPOG00000011991
Spiny chromis	MODERN SPECIES	668															ENSAPOG00000011379	lamb2 (ENSAPOG00000011494) #22	LRRTM2 (ENSAPOG00000011504)	ctnna1 (ENSAPOG00000011580)
Amphiprion	ANCESTRAL SPECIES	40															ENSGT00940000153582.a.m.a.b.e.a	ENSGT00940000156060 #22	ENSGT00940000171469	ENSGT00940000155841.c.a	ENSGT00390000018644	ENSGT00390000013158.c	ENSGT00940000156763.b.b	ENSGT00940000158049.g.b.a	ENSGT00940000160404	ENSGT00940000160570	ENSGT00940000159669.a	ENSGT00940000159633	ENSGT00940000153231.A	ENSGT00390000016002.o.a	ENSGT00940000156621.e.a	ENSGT00940000155188.B.b	ENSGT00940000164876.a
Clown anemonefish	MODERN SPECIES	2511																lamb2 (ENSAOCG00000009156) #22	ENSAOCG00000009186
Orange clownfish	DUPLICATION
Orange clownfish	MODERN SPECIES	19	FKBP15 (ENSAPEG00000014994)	fgf17 (ENSAPEG00000015027)	entpd2a.1 (ENSAPEG00000015050)	nelfb (ENSAPEG00000015068)	arrdc1a (ENSAPEG00000015114)	stxbp1b (ENSAPEG00000015131)	PPP6C (ENSAPEG00000015262)	ENSAPEG00000015287	ENSAPEG00000015310	ENSAPEG00000015337	ENSAPEG00000015473	ENSAPEG00000015593	ENSAPEG00000015809	ENSAPEG00000016118	ENSAPEG00000016695	ENSAPEG00000016796 #22	ENSAPEG00000016810	sh3glb2a (ENSAPEG00000016856)	dph7 (ENSAPEG00000016931)	mrpl41 (ENSAPEG00000016952)	PNPLA7 (ENSAPEG00000016958)	pomt1 (ENSAPEG00000017036)	ENSAPEG00000017092	ENSAPEG00000017108	ENSAPEG00000017120	zgc:64051 (ENSAPEG00000017133)	araf (ENSAPEG00000017172)	imp4 (ENSAPEG00000017240)	RABL6 (ENSAPEG00000017278)	TRAF2 (ENSAPEG00000017341)	tncb (ENSAPEG00000017434)
Orange clownfish	MODERN SPECIES	22	nsfl1c (ENSAPEG00000019136)	FAM110A (ENSAPEG00000019074)	cox4i2 (ENSAPEG00000019055)	bcl2l1 (ENSAPEG00000019045)	ARFGEF2 (ENSAPEG00000018930)	pard6b (ENSAPEG00000018899)	adnpb (ENSAPEG00000018863)	dpm1 (ENSAPEG00000018851)	ENSAPEG00000018697	taf13 (ENSAPEG00000018684)	tnnc2.2 (ENSAPEG00000018661)	TNNC2 (ENSAPEG00000018641)	ENSAPEG00000018623	ENSAPEG00000018608	ENSAPEG00000018585	lamb2 (ENSAPEG00000018433) #22	ENSAPEG00000018414	USP19 (ENSAPEG00000018313) #23	ENSAPEG00000018292	ENSAPEG00000018286	ENSAPEG00000018249	ENSAPEG00000018207	ENSAPEG00000018124	pim1 (ENSAPEG00000018085)	ENSAPEG00000018070	ENSAPEG00000017962	rpl10 (ENSAPEG00000017924)	FLNA (ENSAPEG00000017783)	emd (ENSAPEG00000017765)	ENSAPEG00000017751	MRPL49 (ENSAPEG00000017747)
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000168806
Oryzias	ANCESTRAL SPECIES	4	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093.c	ENSGT00940000156060 #22	ENSGT00940000159085.j #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963.o.a	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00940000165924	ENSGT00940000167093.d	ENSGT00940000167093.c	ENSGT00940000156060 #22	ENSGT00940000159085.j #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963.o.a	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C.g	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106	ENSGT00940000161281
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	23	DNASE1L1 (ENSOMEG00000011761)	ENSOMEG00000011954	dpm1 (ENSOMEG00000012029)	adnpb (ENSOMEG00000012049)	pard6b (ENSOMEG00000012068)	ARFGEF2 (ENSOMEG00000000298)	bcl2l1 (ENSOMEG00000012180)	cox4i2 (ENSOMEG00000012194)	ENSOMEG00000012200	tnnc2.2 (ENSOMEG00000012226)	TNNC2 (ENSOMEG00000000307)	ENSOMEG00000012276	ENSOMEG00000012293	ENSOMEG00000012451	lamb2 (ENSOMEG00000012499) #22	ENSOMEG00000000316 #22	USP19 (ENSOMEG00000012597) #23	ENSOMEG00000012635	ENSOMEG00000012648	ENSOMEG00000012681	ENSOMEG00000000325	ENSOMEG00000012819	pim1 (ENSOMEG00000012860)	gss (ENSOMEG00000012881)	ENSOMEG00000012889	zgc:103759 (ENSOMEG00000012912)	ARHGAP4 (ENSOMEG00000013006)	ENSOMEG00000013030	fam50a (ENSOMEG00000013066)	ENSOMEG00000013104	sars1 (ENSOMEG00000013121)
Indian medaka	MODERN SPECIES	23	rpl10 (ENSOMEG00000011751)	DNASE1L1 (ENSOMEG00000011761)	ENSOMEG00000011954	dpm1 (ENSOMEG00000012029)	adnpb (ENSOMEG00000012049)	pard6b (ENSOMEG00000012068)	ARFGEF2 (ENSOMEG00000000298)	bcl2l1 (ENSOMEG00000012180)	cox4i2 (ENSOMEG00000012194)	ENSOMEG00000012200	tnnc2.2 (ENSOMEG00000012226)	TNNC2 (ENSOMEG00000000307)	ENSOMEG00000012276	ENSOMEG00000012293	ENSOMEG00000012451	lamb2 (ENSOMEG00000012499) #22	ENSOMEG00000000316 #22	USP19 (ENSOMEG00000012597) #23	ENSOMEG00000012635	ENSOMEG00000012648	ENSOMEG00000012681	ENSOMEG00000000325	ENSOMEG00000012819	pim1 (ENSOMEG00000012860)	gss (ENSOMEG00000012881)	ENSOMEG00000012889	zgc:103759 (ENSOMEG00000012912)	ARHGAP4 (ENSOMEG00000013006)	ENSOMEG00000013030	fam50a (ENSOMEG00000013066)	ENSOMEG00000013104
Javanese ricefish	MODERN SPECIES	21	ENSOJAG00000023496	ENSOJAG00000023494	rpl10 (ENSOJAG00000023352)	ENSOJAG00000023349	dpm1 (ENSOJAG00000023293)	adnpb (ENSOJAG00000023274)	pard6b (ENSOJAG00000023269)	ARFGEF2 (ENSOJAG00000023063)	bcl2l1 (ENSOJAG00000023045)	cox4i2 (ENSOJAG00000023040)	taf13 (ENSOJAG00000023037)	ENSOJAG00000023029	ENSOJAG00000023022	ENSOJAG00000023020	ENSOJAG00000022697	lamb2 (ENSOJAG00000021744) #22	USP19 (ENSOJAG00000021704) #23	ENSOJAG00000021697	ENSOJAG00000021682	ENSOJAG00000021664	ENSOJAG00000021642	ENSOJAG00000021628	pim1 (ENSOJAG00000021597)	gss (ENSOJAG00000021554)	zgc:103759 (ENSOJAG00000021543)	ARHGAP4 (ENSOJAG00000021471)	cav4b (ENSOJAG00000021464)	fam50a (ENSOJAG00000021434)	ENSOJAG00000021424	ENSOJAG00000021417	sars1 (ENSOJAG00000021396)
Oryzias_a	ANCESTRAL SPECIES		ENSGT00390000003897	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00940000153769.G	ENSGT00940000153481.B	ENSGT00530000063631.b.n.b	ENSGT00950000183211.a.a.a	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00390000012981.c	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093.c	ENSGT00940000156060 #22	ENSGT00940000159085.j #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963.o.b	ENSGT00940000166696	ENSGT00940000157963.o.a	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B
Japanese Medaka HdrR	MODERN SPECIES	21	FLNA (ENSORLG00000001982)	rpl10 (ENSORLG00000027642)	ENSORLG00000001957	ENSORLG00000001946	dpm1 (ENSORLG00000001880)	adnpb (ENSORLG00000001864)	pard6b (ENSORLG00000001861)	ARFGEF2 (ENSORLG00000001855)	bcl2l1 (ENSORLG00000025151)	cox4i2 (ENSORLG00000001813)	taf13 (ENSORLG00000023250)	tnnc2.2 (ENSORLG00000001797)	ENSORLG00000001761	ENSORLG00000001750	ENSORLG00000001709	lamb2 (ENSORLG00000028202) #22	USP19 (ENSORLG00000001685) #23	ENSORLG00000026988	ENSORLG00000028314	ENSORLG00000027819	ENSORLG00000029735	ENSORLG00000026909	ENSORLG00000001660	pim1 (ENSORLG00000001653)	gss (ENSORLG00000001633)	zgc:103759 (ENSORLG00000001613)	ENSORLG00000001598	cav4b (ENSORLG00000024542)	fam50a (ENSORLG00000001578)	ENSORLG00000001557	sars1 (ENSORLG00000001547)
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Aplocheiloidei	ANCESTRAL SPECIES		ENSGT00940000153311.a.a.b	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000155987.b.e.b	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000171106
Mangrove rivulus	MODERN SPECIES	18											tnnc2.2 (ENSKMAG00000008738)	TNNC2 (ENSKMAG00000008710)	ENSKMAG00000008696	ENSKMAG00000008681	ENSKMAG00000008602	lamb2 (ENSKMAG00000008549) #22	USP19 (ENSKMAG00000008386) #23	ENSKMAG00000008355	ENSKMAG00000008343	ENSKMAG00000008324	ENSKMAG00000008302	pim1 (ENSKMAG00000008261)	gss (ENSKMAG00000008228)	zgc:103759 (ENSKMAG00000008208)	ARHGAP4 (ENSKMAG00000008180)	cav4b (ENSKMAG00000008159)	fam50a (ENSKMAG00000008113)	ENSKMAG00000008088	sars1 (ENSKMAG00000008047)	ENSKMAG00000008009	tmem106c (ENSKMAG00000007983)
Turquoise killifish	MODERN SPECIES	1624	SDCBP (ENSNFUG00015021361)	FKBP1AB (ENSNFUG00015021354)	NSFL1C (ENSNFUG00015021338)	FAM110A (ENSNFUG00015021332)	COX4I2 (ENSNFUG00015021329)	BCL2L1 (ENSNFUG00015021328)	PARD6B (ENSNFUG00015021172)	adnpb (ENSNFUG00015021169)	DPM1 (ENSNFUG00015021164)	TNNC2 (ENSNFUG00015021120)	ENSNFUG00015021114	ENSNFUG00015021112	ENSNFUG00015021100	ENSNFUG00015019715	ENSNFUG00015019538	LAMB2 (ENSNFUG00015012483) #22	ENSNFUG00015012106	USP19 (ENSNFUG00015011430) #23	SI (ENSNFUG00015011351)	ENSNFUG00015011345	ENSNFUG00015011341	ENSNFUG00015011332	ENSNFUG00015011312	ENSNFUG00015011304	PIM1 (ENSNFUG00015011265)	ENSNFUG00015011247	gss (ENSNFUG00015010765)	zgc:103759 (ENSNFUG00015010712)	ARHGAP4 (ENSNFUG00015010700)	ENSNFUG00015010695	ENSNFUG00015010268
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000155987.b.f	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
NAME_4	ANCESTRAL SPECIES	198	ENSGT00520000055567.a.a.a	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085.l #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00990000206442	ENSGT00940000166296
Mummichog	MODERN SPECIES	2426	nsfl1c (ENSFHEG00000014606)	FAM110A (ENSFHEG00000014570)	cox4i2 (ENSFHEG00000000352)	bcl2l1 (ENSFHEG00000014556)	ARFGEF2 (ENSFHEG00000014519)	pard6b (ENSFHEG00000013892)	adnpb (ENSFHEG00000013883)	dpm1 (ENSFHEG00000013879)	slc35c2 (ENSFHEG00000013868)	taf13 (ENSFHEG00000013859)	tnnc2.2 (ENSFHEG00000013851)	TNNC2 (ENSFHEG00000013837)	ENSFHEG00000013831	ENSFHEG00000013816	ENSFHEG00000013654	lamb2 (ENSFHEG00000013633) #22	USP19 (ENSFHEG00000000320) #23	ENSFHEG00000013603	ENSFHEG00000013595	ENSFHEG00000013568
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	1767																ENSCVAG00000010766 #22	lamb2 (ENSCVAG00000010789) #22	ENSCVAG00000010818 #23	ENSCVAG00000010863 #23
Sheepshead minnow	MODERN SPECIES	1767															ENSCVAG00000010766 #22	lamb2 (ENSCVAG00000010789) #22	ENSCVAG00000010818 #23	ENSCVAG00000010863 #23
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000155987.b.f	ENSGT00940000157963	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
Platyfish	MODERN SPECIES		bcl2l1 (ENSXMAG00000026765)	ARFGEF2 (ENSXMAG00000016622)	ENSXMAG00000025505	pard6b (ENSXMAG00000016610)	ENSXMAG00000022717	adnpb (ENSXMAG00000028188)	dpm1 (ENSXMAG00000006459)	SNIP1 (ENSXMAG00000023091)	ENSXMAG00000025204	taf13 (ENSXMAG00000019607)	tnnc2.2 (ENSXMAG00000025748)	TNNC2 (ENSXMAG00000028434)	ENSXMAG00000028546	ENSXMAG00000016526	ENSXMAG00000016516	lamb2 (ENSXMAG00000016442) #22	USP19 (ENSXMAG00000016414) #23	ENSXMAG00000030095	ENSXMAG00000020962	ENSXMAG00000016409	ENSXMAG00000025836	ENSXMAG00000028759	ENSXMAG00000027187	ENSXMAG00000026776	pim1 (ENSXMAG00000021393)	gss (ENSXMAG00000016356)	zgc:103759 (ENSXMAG00000016353)	ARHGAP4 (ENSXMAG00000016317)	cav4b (ENSXMAG00000016311)	fam50a (ENSXMAG00000023736)	ENSXMAG00000029856
Poecilia	ANCESTRAL SPECIES	26	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000166696	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Guppy	DUPLICATION
Guppy	MODERN SPECIES	459	ENSPREG00000004435	cox4i2 (ENSPREG00000004428)	bcl2l1 (ENSPREG00000004394)	ARFGEF2 (ENSPREG00000004286)	pard6b (ENSPREG00000004259)	adnpb (ENSPREG00000004249)	dpm1 (ENSPREG00000004118)	ENSPREG00000004025	taf13 (ENSPREG00000003999)	tnnc2.2 (ENSPREG00000003959)	ENSPREG00000003934	ENSPREG00000003921	ENSPREG00000003854	ENSPREG00000003770	lamb2 (ENSPREG00000003719) #22	ENSPREG00000003699 #22	USP19 (ENSPREG00000003678) #23	ENSPREG00000003647	ENSPREG00000003636	ENSPREG00000003611	ENSPREG00000003595	ENSPREG00000003579	ENSPREG00000003570	ENSPREG00000003547	pim1 (ENSPREG00000003525)	ENSPREG00000003521	gss (ENSPREG00000003479)	ENSPREG00000003255	zgc:103759 (ENSPREG00000003231)	ARHGAP4 (ENSPREG00000003195)	cav4b (ENSPREG00000003174)
Guppy	MODERN SPECIES	459	nsfl1c (ENSPREG00000004454)	ENSPREG00000004435	cox4i2 (ENSPREG00000004428)	bcl2l1 (ENSPREG00000004394)	ARFGEF2 (ENSPREG00000004286)	pard6b (ENSPREG00000004259)	adnpb (ENSPREG00000004249)	dpm1 (ENSPREG00000004118)	ENSPREG00000004025	taf13 (ENSPREG00000003999)	tnnc2.2 (ENSPREG00000003959)	ENSPREG00000003934	ENSPREG00000003921	ENSPREG00000003854	ENSPREG00000003770	lamb2 (ENSPREG00000003719) #22	ENSPREG00000003699 #22	USP19 (ENSPREG00000003678) #23	ENSPREG00000003647	ENSPREG00000003636	ENSPREG00000003611	ENSPREG00000003595	ENSPREG00000003579	ENSPREG00000003570	ENSPREG00000003547	pim1 (ENSPREG00000003525)	ENSPREG00000003521	gss (ENSPREG00000003479)	ENSPREG00000003255	zgc:103759 (ENSPREG00000003231)	ARHGAP4 (ENSPREG00000003195)
NAME_6	DUPLICATION
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES																	ENSGT00940000156060.bd.a #22
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	3994																lamb2 (ENSPLAG00000010971) #22
Sailfin molly	MODERN SPECIES	4008																lamb2 (ENSPLAG00000010054) #22
Amazon molly	MODERN SPECIES	528						dpm1 (ENSPFOG00000019422)	ENSPFOG00000019431	slc35c2 (ENSPFOG00000023112)	taf13 (ENSPFOG00000020574)	tnnc2.2 (ENSPFOG00000019443)	TNNC2 (ENSPFOG00000019446)	ENSPFOG00000023239	ENSPFOG00000019447	ENSPFOG00000022175	ENSPFOG00000019449	lamb2 (ENSPFOG00000019460) #22	USP19 (ENSPFOG00000019469) #23	ENSPFOG00000019479	ENSPFOG00000019482	ENSPFOG00000019483	ENSPFOG00000023200	ENSPFOG00000019485	ENSPFOG00000019492	pim1 (ENSPFOG00000019499)	gss (ENSPFOG00000019503)	zgc:103759 (ENSPFOG00000019511)	ARHGAP4 (ENSPFOG00000019520)	cav4b (ENSPFOG00000019523)	fam50a (ENSPFOG00000019526)	ENSPFOG00000019528
NAME_6	ANCESTRAL SPECIES	107	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.d	ENSGT00940000165924	ENSGT00920000149641.c	ENSGT00940000167093	ENSGT00940000156060.cd #22	ENSGT00940000156060.bd.b #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000166696	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k	ENSGT00940000161281
Sailfin molly	MODERN SPECIES	1349																ENSPLAG00000020725 #22	USP19 (ENSPLAG00000020700) #23	ENSPLAG00000020639	ENSPLAG00000020633
NAME_6	ANCESTRAL SPECIES	107	ENSGT00390000002407.c	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00940000158950	ENSGT00950000183211.a.a.a	ENSGT00530000063631.b.n.b	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00510000048078	ENSGT00390000012981	ENSGT00940000153541.C.a.b	ENSGT00940000153541.C.a.a	ENSGT00920000149641.d	ENSGT00940000165924	ENSGT00920000149641.c	ENSGT00940000167093	ENSGT00940000156060.cd #22	ENSGT00940000156060.bd.b #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000166696	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00390000013764	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000183006.A.a.b	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000153792.B	ENSGT00940000156186.k
Sailfin molly	MODERN SPECIES	1683														ENSPLAG00000022171	ENSPLAG00000022162	ENSPLAG00000000474 #22	ENSPLAG00000022140	ENSPLAG00000022115	ENSPLAG00000022111
Osteoglossiformes	ANCESTRAL SPECIES	66	ENSGT00940000164997	ENSGT00940000153311.a.a.b	ENSGT00390000005318.b.a.g	ENSGT00520000055567.a.a.a.t	ENSGT00950000183056.B.a.h	ENSGT00390000002407.c.d.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.k.a	ENSGT00940000158950	ENSGT00950000183211.a.a.a.kb	ENSGT00530000063631.b.m	ENSGT00940000153481.B	ENSGT00940000153769.G	ENSGT00940000153541.C.a.a.b	ENSGT00940000165924	ENSGT00940000167093	ENSGT00940000156060 #22	ENSGT00940000159085 #23	ENSGT00390000003093	ENSGT00940000167423	ENSGT00940000157255.d	ENSGT01070000253775.a.d.a.b.b.h.a	ENSGT00940000164714	ENSGT00940000164203	ENSGT00940000156963.a.a.c	ENSGT00940000157756	ENSGT00940000157677	ENSGT00940000166103	ENSGT00390000013347.b	ENSGT00940000157524 #12	ENSGT00390000000980	ENSGT01020000230364.a.a.a.a.a.a
P. kingsleyae	MODERN SPECIES	218														ENSPKIG00000022788	ENSPKIG00000022828	lamb2 (ENSPKIG00000022898) #22	USP19 (ENSPKIG00000022950) #23	ENSPKIG00000022998	ENSPKIG00000023008	ENSPKIG00000023033	ENSPKIG00000023049	SLC26A6 (ENSPKIG00000023062)	ENSPKIG00000023094	ENSPKIG00000023112	ENSPKIG00000023123	ENSPKIG00000023140	ENSPKIG00000023172	ENSPKIG00000023182	cebpz (ENSPKIG00000023192)	CEBPZOS (ENSPKIG00000023212)	ndufaf7 (ENSPKIG00000023222)
Asian bonytongue	DUPLICATION
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	21	ENSSFOG00015031547	SCAI (ENSSFOG00015015027)	PPP6C (ENSSFOG00015026875)	ENSSFOG00015008296 #22	ENSSFOG00015027534	SH3GLB2 (ENSSFOG00015025937)	ENSSFOG00015027046	OLFML2A (ENSSFOG00015014873)	ENSSFOG00015031326	ARPC5L (ENSSFOG00015025316)	ENSSFOG00015024936	ENSSFOG00015033038	ENSSFOG00015031551	SCAI (ENSSFOG00015032090)	PPP6C (ENSSFOG00015015094)	ENSSFOG00015033015 #22	ENSSFOG00015015138	SH3GLB2 (ENSSFOG00015015172)	ENSSFOG00015015243	PIP5KL1 (ENSSFOG00015015251)	dpm2 (ENSSFOG00015033056)	ENSSFOG00015015295	eeig1b (ENSSFOG00015025518)	NAIF1 (ENSSFOG00015015307)	slc25a25b (ENSSFOG00015030265)	uap1l1 (ENSSFOG00015015353)	zdhhc12b (ENSSFOG00015015374)	ENSSFOG00015015387	sfrp1b (ENSSFOG00015015426)	ENSSFOG00015015440	ENSSFOG00015025014
Asian bonytongue	MODERN SPECIES	21	DENND1A (ENSSFOG00015014700)	lhx2b (ENSSFOG00015014773)	NEK6 (ENSSFOG00015014790)	psmb7 (ENSSFOG00015014825)	NR5A1 (ENSSFOG00015029487)	ENSSFOG00015028783	nr6a1a (ENSSFOG00015014862)	OLFML2A (ENSSFOG00015033126)	ENSSFOG00015032130	ARPC5L (ENSSFOG00015025966)	ENSSFOG00015027501	ENSSFOG00015027511	ENSSFOG00015031547	SCAI (ENSSFOG00015015027)	PPP6C (ENSSFOG00015026875)	ENSSFOG00015008296 #22	ENSSFOG00015027534	SH3GLB2 (ENSSFOG00015025937)	ENSSFOG00015027046	OLFML2A (ENSSFOG00015014873)	ENSSFOG00015031326	ARPC5L (ENSSFOG00015025316)	ENSSFOG00015024936	ENSSFOG00015033038	ENSSFOG00015031551	SCAI (ENSSFOG00015032090)	PPP6C (ENSSFOG00015015094)	ENSSFOG00015033015 #22	ENSSFOG00015015138	SH3GLB2 (ENSSFOG00015015172)	ENSSFOG00015015243
Asian bonytongue	MODERN SPECIES	11	sdcbp2 (ENSSFOG00015017396)	fkbp1aa (ENSSFOG00015026589)	ENSSFOG00015017438	nsfl1c (ENSSFOG00015017459)	FAM110A (ENSSFOG00015017472)	cox4i2 (ENSSFOG00015024531)	bcl2l1 (ENSSFOG00015030261)	ARFGEF2 (ENSSFOG00015017513)	pard6b (ENSSFOG00015017642)	ADNP (ENSSFOG00015017648)	dpm1 (ENSSFOG00015031539)	ENSSFOG00015017671	TNNC2 (ENSSFOG00015017755)	ENSSFOG00015017777	ENSSFOG00015017807	lamb2 (ENSSFOG00015017902) #22	USP19 (ENSSFOG00015018037) #23	ENSSFOG00015025716	ENSSFOG00015024958	ENSSFOG00015024305	ENSSFOG00015018218	ENSSFOG00015018238	ENSSFOG00015018264	ENSSFOG00015031789	ENSSFOG00015018376	ENSSFOG00015018300	sema3b (ENSSFOG00015018431)	sema3bl (ENSSFOG00015018543)	zgc:136971 (ENSSFOG00015018563)	ifrd2 (ENSSFOG00015018577)	amt (ENSSFOG00015018630) #12
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1500	aldh1l1 (ENSCMIG00000019514)	klf15 (ENSCMIG00000019538)	ENSCMIG00000019539	ENSCMIG00000019542	ENSCMIG00000019543	uroc1 (ENSCMIG00000019546)	ENSCMIG00000019547	chchd4a (ENSCMIG00000019548)	tmem43 (ENSCMIG00000019552)	xpc (ENSCMIG00000019569)	LSM3 (ENSCMIG00000019583)	slc6a6b (ENSCMIG00000019591)	ENSCMIG00000019613 #21	ENSCMIG00000019614	ENSCMIG00000019674 #22	lamb2 (ENSCMIG00000019855) #22	USP19 (ENSCMIG00000019917) #23	ENSCMIG00000019953	ENSCMIG00000019968	ENSCMIG00000019969	qars1 (ENSCMIG00000019972) #24	qrich1 (ENSCMIG00000019974) #25	impdh2 (ENSCMIG00000019979) #26	ENSCMIG00000019981	ndufaf3 (ENSCMIG00000019982) #27	uqcrc1 (ENSCMIG00000019984)	HYAL2 (ENSCMIG00000019987)	ENSCMIG00000019988	ENSCMIG00000019989	pfkfb4a (ENSCMIG00000019997)	prkcda (ENSCMIG00000020018)
Elephant shark	MODERN SPECIES	1500	SLC41A3 (ENSCMIG00000019488)	aldh1l1 (ENSCMIG00000019514)	klf15 (ENSCMIG00000019538)	ENSCMIG00000019539	ENSCMIG00000019542	ENSCMIG00000019543	uroc1 (ENSCMIG00000019546)	ENSCMIG00000019547	chchd4a (ENSCMIG00000019548)	tmem43 (ENSCMIG00000019552)	xpc (ENSCMIG00000019569)	LSM3 (ENSCMIG00000019583)	slc6a6b (ENSCMIG00000019591)	ENSCMIG00000019613 #21	ENSCMIG00000019614	ENSCMIG00000019674 #22	lamb2 (ENSCMIG00000019855) #22	USP19 (ENSCMIG00000019917) #23	ENSCMIG00000019953	ENSCMIG00000019968	ENSCMIG00000019969	qars1 (ENSCMIG00000019972) #24	qrich1 (ENSCMIG00000019974) #25	impdh2 (ENSCMIG00000019979) #26	ENSCMIG00000019981	ndufaf3 (ENSCMIG00000019982) #27	uqcrc1 (ENSCMIG00000019984)	HYAL2 (ENSCMIG00000019987)	ENSCMIG00000019988	ENSCMIG00000019989	pfkfb4a (ENSCMIG00000019997)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000156060 #22
Hagfish	DUPLICATION
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	1379								ENSEBUG00000004474	ENSEBUG00000007211	klf15 (ENSEBUG00000016671)	ENSEBUG00000003173	cdk17 (ENSEBUG00000007392)	ENSEBUG00000007250	abt1 (ENSEBUG00000016622)	ENSEBUG00000010440	ENSEBUG00000004090 #22	ENSEBUG00000004276	ENSEBUG00000015746 #22
Hagfish	MODERN SPECIES	212															ENSEBUG00000009504	ENSEBUG00000003454 #22	FLNC (ENSEBUG00000008741)	ENSEBUG00000003807	ENSEBUG00000007897	ENSEBUG00000002979	sephs1 (ENSEBUG00000005398)	ENSEBUG00000014209	ENSEBUG00000001970	ENSEBUG00000009343	ENSEBUG00000003997	ENSEBUG00000003924	ENSEBUG00000010049	ENSEBUG00000015093	aspn (ENSEBUG00000011612)	ENSEBUG00000008170 ##14	ENSEBUG00000007942
Hagfish	MODERN SPECIES	47					ENSEBUG00000010718	ENSEBUG00000013336	ENSEBUG00000010789	ENSEBUG00000004803	ENSEBUG00000014420	ENSEBUG00000013105	ENSEBUG00000001641	ENSEBUG00000011188	ENSEBUG00000009900	atp6v1f (ENSEBUG00000003291)	ENSEBUG00000008457 #22	ENSEBUG00000013531 #22	ENSEBUG00000007603	ENSEBUG00000006452	idh3g (ENSEBUG00000012086)	ENSEBUG00000012945	nrf1 (ENSEBUG00000004634)	ENSEBUG00000012155	prkcda (ENSEBUG00000013178)	ENSEBUG00000004275	EPYC (ENSEBUG00000007673)	psmd6 (ENSEBUG00000004609)	ENSEBUG00000007454	ENSEBUG00000007184	txnrd3 (ENSEBUG00000005809)	cav1 (ENSEBUG00000003330)	ENSEBUG00000013433
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	47	cav1 (ENSEBUG00000003330)	txnrd3 (ENSEBUG00000005809)	ENSEBUG00000007184	ENSEBUG00000007454	psmd6 (ENSEBUG00000004609)	EPYC (ENSEBUG00000007673)	ENSEBUG00000004275	prkcda (ENSEBUG00000013178)	ENSEBUG00000012155	nrf1 (ENSEBUG00000004634)	ENSEBUG00000012945	idh3g (ENSEBUG00000012086)	ENSEBUG00000006452	ENSEBUG00000007603	ENSEBUG00000013531 #22	ENSEBUG00000008457 #22	atp6v1f (ENSEBUG00000003291)	ENSEBUG00000009900	ENSEBUG00000011188	ENSEBUG00000001641	ENSEBUG00000013105	ENSEBUG00000014420	ENSEBUG00000004803	ENSEBUG00000010789	ENSEBUG00000013336	ENSEBUG00000010718
Hagfish	MODERN SPECIES	575																ENSEBUG00000010387 #22	slc6a8 (ENSEBUG00000012491)	ENSEBUG00000016576	ENSEBUG00000013525	ENSEBUG00000006928	ENSEBUG00000016475	PRKAR2A (ENSEBUG00000015349) #34	ENSEBUG00000003899	ENSEBUG00000007829	ENSEBUG00000006932	ENSEBUG00000001296	ENSEBUG00000016199	ENSEBUG00000012151	ENSEBUG00000007547	PACS2 (ENSEBUG00000006876)	ENSEBUG00000013806
Hagfish	MODERN SPECIES	1379						ENSEBUG00000004474	ENSEBUG00000007211	klf15 (ENSEBUG00000016671)	ENSEBUG00000003173	cdk17 (ENSEBUG00000007392)	ENSEBUG00000007250	abt1 (ENSEBUG00000016622)	ENSEBUG00000010440	ENSEBUG00000004090 #22	ENSEBUG00000004276	ENSEBUG00000015746 #22
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	3429																ENSPMAG00000005955 #22
Lamprey	MODERN SPECIES	5085																ENSPMAG00000003395 #22