Mammalia	ANCESTRAL SPECIES		ENSGT00550000074801	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000163807	ENSGT00950000182963.b.a
Theria	ANCESTRAL SPECIES	1	ENSGT00550000074801	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000163807	ENSGT00950000182963.b.a
Eutheria	ANCESTRAL SPECIES	26	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Primates	ANCESTRAL SPECIES	19	ENSGT00550000074801.h	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Haplorrhini	ANCESTRAL SPECIES	18	ENSGT00940000158684	ENSGT00550000074801.h	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164589	ENSGT00950000182963.b.a
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00940000158684	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000154164.d	ENSGT00940000164589
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00550000074801.h.d	ENSGT00550000074801.h.c.a	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00910000148115	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688
Cercopithecidae	ANCESTRAL SPECIES	27	ENSGT00550000074801.h.c.a.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00910000148115	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00550000074801.h.c.a.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000154164.d
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00550000074801.h.c.a.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562.e.b ##27	ENSGT00940000159562.e.a ##27	ENSGT00530000063174.a.i.e #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688
Cercopithecinae_b	ANCESTRAL SPECIES	35	ENSGT00530000063666.b.h.b	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT01050000244986.b.b.d.a.b	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562.f #27	ENSGT00530000063174.a.i.e #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164589
Cercopithecinae_d	ANCESTRAL SPECIES	51	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.b.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00940000153558.b.i.b.a.a.b	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562.f #27	ENSGT00530000063174.a.i.e #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164589	ENSGT00950000182963.b.a
Drill	MODERN SPECIES	1190																RPS6KA3 (ENSMLEG00000034063) #22	EIF1AX (ENSMLEG00000031392) #23	MAP7D2 (ENSMLEG00000018058) #24	BCLAF3 (ENSMLEG00000016996) #25	SH3KBP1 (ENSMLEG00000038375) #26	MAP3K15 (ENSMLEG00000028673) #27	ENSMLEG00000033588 #28	ADGRG2 (ENSMLEG00000030833) #29	PHKA2 (ENSMLEG00000029623) #30	ENSMLEG00000025963 #31	PPEF1 (ENSMLEG00000035187) #32	RS1 (ENSMLEG00000024203) #33	CDKL5 (ENSMLEG00000038004) #34	SCML2 (ENSMLEG00000007077) #35
Sooty mangabey	MODERN SPECIES	448	APOO (ENSCATG00000031869)	ENSCATG00000032289	SAT1 (ENSCATG00000044813)	ACOT9 (ENSCATG00000031637)	PRDX4 (ENSCATG00000040922)	PTCHD1 (ENSCATG00000018108)	CBLL2 (ENSCATG00000014814)	PHEX (ENSCATG00000031574)	SMS (ENSCATG00000032661)	MBTPS2 (ENSCATG00000031542)	ENSCATG00000037334	SMPX (ENSCATG00000043293)	KLHL34 (ENSCATG00000014878)	CNKSR2 (ENSCATG00000035326)	ENSCATG00000035316	RPS6KA3 (ENSCATG00000036143) #22	EIF1AX (ENSCATG00000033237) #23	MAP7D2 (ENSCATG00000042697) #24	BCLAF3 (ENSCATG00000039065) #25	SH3KBP1 (ENSCATG00000034119) #26	MAP3K15 (ENSCATG00000024304) ##27	PDHA1 (ENSCATG00000044567) #28	ADGRG2 (ENSCATG00000035439) #29	PHKA2 (ENSCATG00000044694) #30	ENSCATG00000037972	PPEF1 (ENSCATG00000043035) #32	RS1 (ENSCATG00000029796) #33	CDKL5 (ENSCATG00000041616) #34	SCML2 (ENSCATG00000038994) #35	BEND2 (ENSCATG00000036336)	SCML1 (ENSCATG00000006222)
Olive baboon	MODERN SPECIES	792	DDX53 (ENSPANG00000037837)	ENSPANG00000035706	ENSPANG00000045931	ENSPANG00000037872	CBLL2 (ENSPANG00000046007)	ENSPANG00000037098	PHEX (ENSPANG00000010105)	SMS (ENSPANG00000003155)	MBTPS2 (ENSPANG00000024280)	ENSPANG00000050152	SMPX (ENSPANG00000005741)	KLHL34 (ENSPANG00000012353)	CNKSR2 (ENSPANG00000011941)	ENSPANG00000029508	ENSPANG00000006351	RPS6KA3 (ENSPANG00000016330) #22	EIF1AX (ENSPANG00000030224) #23	MAP7D2 (ENSPANG00000019661) #24	BCLAF3 (ENSPANG00000004509) #25	SH3KBP1 (ENSPANG00000006736) #26	MAP3K15 (ENSPANG00000007384) #27	ENSPANG00000035301 #28	ADGRG2 (ENSPANG00000004239) #29	PHKA2 (ENSPANG00000016122) #30	ENSPANG00000029606 #31	PPEF1 (ENSPANG00000010228) #32	ENSPANG00000035243	CDKL5 (ENSPANG00000004460) #34	ENSPANG00000041187	SCML2 (ENSPANG00000018991) #35	RAI2 (ENSPANG00000015463)
Macaca	ANCESTRAL SPECIES	29	ENSGT00550000074801.h.c.a.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00940000154326.a.a.h.e.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562.e.b ##27	ENSGT00530000063174.a.i.e #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000154164.d
Pig-tailed macaque	MODERN SPECIES	549	KLHL15 (ENSMNEG00000006144)	CXorf58 (ENSMNEG00000045055)	APOO (ENSMNEG00000021703)	ENSMNEG00000042646	SAT1 (ENSMNEG00000028507)	ACOT9 (ENSMNEG00000034251)	PRDX4 (ENSMNEG00000030258)	PTCHD1 (ENSMNEG00000031256)	PHEX (ENSMNEG00000030561)	SMS (ENSMNEG00000030826)	ENSMNEG00000036966	MBTPS2 (ENSMNEG00000018031)	SMPX (ENSMNEG00000044214)	KLHL34 (ENSMNEG00000004752)	CNKSR2 (ENSMNEG00000033243)	RPS6KA3 (ENSMNEG00000013736) #22	EIF1AX (ENSMNEG00000035197) #23	MAP7D2 (ENSMNEG00000042827) #24	BCLAF3 (ENSMNEG00000044107) #25	ENSMNEG00000039258	SH3KBP1 (ENSMNEG00000037170) #26	MAP3K15 (ENSMNEG00000029196) ##27	ENSMNEG00000043035 #28	ADGRG2 (ENSMNEG00000043949) #29	PHKA2 (ENSMNEG00000039386) #30	ENSMNEG00000028824 #31	PPEF1 (ENSMNEG00000034590) #32	RS1 (ENSMNEG00000043209) #33	CDKL5 (ENSMNEG00000004730) #34	SCML2 (ENSMNEG00000011431) #35	BEND2 (ENSMNEG00000036925)
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT01050000244986.b.b.d.a.b	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000164709.a.b.b.a.b.b.b.a.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562.e.b ##27	ENSGT00530000063174.a.i.e #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000154164.d
Crab-eating macaque	MODERN SPECIES	175	ACOT9 (ENSMFAG00000041858)	PRDX4 (ENSMFAG00000036346)	PTCHD1 (ENSMFAG00000056214)	DDX53 (ENSMFAG00000063689)	ENSMFAG00000055175	CBLL2 (ENSMFAG00000061234)	ENSMFAG00000064976	ENSMFAG00000057337	PHEX (ENSMFAG00000045722)	SMS (ENSMFAG00000039117)	MBTPS2 (ENSMFAG00000042182)	SMPX (ENSMFAG00000040826)	CNKSR2 (ENSMFAG00000037951)	ENSMFAG00000052941	ENSMFAG00000061291	RPS6KA3 (ENSMFAG00000045085) #22	ENSMFAG00000060557 #23	MAP7D2 (ENSMFAG00000055804) #24	BCLAF3 (ENSMFAG00000003230) #25	ENSMFAG00000021756	SH3KBP1 (ENSMFAG00000002962) #26	ENSMFAG00000000869 ##27	ENSMFAG00000058383 ##27	PDHA1 (ENSMFAG00000043170) #28	ADGRG2 (ENSMFAG00000001073) #29	PHKA2 (ENSMFAG00000044106) #30	ENSMFAG00000034482	PPEF1 (ENSMFAG00000032152) #32	RS1 (ENSMFAG00000003687) #33	CDKL5 (ENSMFAG00000030921) #34	SCML2 (ENSMFAG00000042495) #35
Rhesus	MODERN SPECIES	327	SAT1 (ENSMMUG00000060580)	ACOT9 (ENSMMUG00000018824)	ENSMMUG00000056089	PRDX4 (ENSMMUG00000021366)	PTCHD1 (ENSMMUG00000001088)	DDX53 (ENSMMUG00000022142)	CBLL2 (ENSMMUG00000003250)	PHEX (ENSMMUG00000023589)	SMS (ENSMMUG00000020392)	ENSMMUG00000051932	YY2 (ENSMMUG00000022467)	SMPX (ENSMMUG00000057558)	KLHL34 (ENSMMUG00000007501)	CNKSR2 (ENSMMUG00000007500)	ENSMMUG00000063057	RPS6KA3 (ENSMMUG00000002134) #22	EIF1AX (ENSMMUG00000051148) #23	MAP7D2 (ENSMMUG00000000192) #24	BCLAF3 (ENSMMUG00000004745) #25	ENSMMUG00000010727	SH3KBP1 (ENSMMUG00000004744) #26	MAP3K15 (ENSMMUG00000061236) ##27	PDHA1 (ENSMMUG00000017336) #28	ADGRG2 (ENSMMUG00000020515) #29	PHKA2 (ENSMMUG00000020513) #30	PPEF1 (ENSMMUG00000005066) #32	RS1 (ENSMMUG00000005065) #33	CDKL5 (ENSMMUG00000005063) #34	SCML2 (ENSMMUG00000005084) #35	BEND2 (ENSMMUG00000019969)	RAI2 (ENSMMUG00000001433)
Vervet Monkey	MODERN SPECIES	203	KLHL15 (ENSCSAG00000014371)	CXorf58 (ENSCSAG00000014383)	APOO (ENSCSAG00000014393)	SAT1 (ENSCSAG00000014398)	ACOT9 (ENSCSAG00000014405)	PRDX4 (ENSCSAG00000014411)	PTCHD1 (ENSCSAG00000014414)	DDX53 (ENSCSAG00000019540)	ENSCSAG00000019539	PHEX (ENSCSAG00000014426)	SMS (ENSCSAG00000014438)	MBTPS2 (ENSCSAG00000014446)	SMPX (ENSCSAG00000014455)	KLHL34 (ENSCSAG00000019538)	CNKSR2 (ENSCSAG00000014511)	RPS6KA3 (ENSCSAG00000014553) #22	EIF1AX (ENSCSAG00000014562) #23	MAP7D2 (ENSCSAG00000014575) #24	BCLAF3 (ENSCSAG00000014582) #25	SH3KBP1 (ENSCSAG00000014593) #26	MAP3K15 (ENSCSAG00000014608) #27	ADGRG2 (ENSCSAG00000014621) #29	PHKA2 (ENSCSAG00000014634) #30	PPEF1 (ENSCSAG00000014696) #32	RS1 (ENSCSAG00000014719) #33	CDKL5 (ENSCSAG00000014729) #34	SCML2 (ENSCSAG00000014738) #35	BEND2 (ENSCSAG00000014759)	RAI2 (ENSCSAG00000019537)	SCML1 (ENSCSAG00000014776)	NHS (ENSCSAG00000014780)
Rhinopithecus	ANCESTRAL SPECIES	500																ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b.c #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00910000148115	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30
Golden snub-nosed monkey	MODERN SPECIES	2178																RPS6KA3 (ENSRROG00000035569) #22	EIF1AX (ENSRROG00000042555) #23	MAP7D2 (ENSRROG00000026767) #24	ENSRROG00000036041
Hominoidea	ANCESTRAL SPECIES	16	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT00940000157313	ENSGT00870000136506.ob.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00910000148115	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688
Hominidae	ANCESTRAL SPECIES	8	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT00940000157313	ENSGT00870000136506.pb	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00910000148115	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT00940000157313	ENSGT00870000136506.pb	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00910000148115	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT00940000157313	ENSGT00870000136506.pb	ENSGT00940000167584	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000154164.d
Pan	ANCESTRAL SPECIES	6	ENSGT00510000048637	ENSGT00530000063666.b.h.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000167221	ENSGT00940000166413	ENSGT00940000157313	ENSGT00870000136506.pb	ENSGT00940000167584	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000167769	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000164589
Chimpanzee	MODERN SPECIES	972	CXorf58 (ENSPTRG00000048338)	APOO (ENSPTRG00000021742)	ENSPTRG00000049093	ACOT9 (ENSPTRG00000021740)	PRDX4 (ENSPTRG00000049325)	PTCHD1 (ENSPTRG00000021738)	DDX53 (ENSPTRG00000028313)	ENSPTRG00000047608	CBLL2 (ENSPTRG00000028314)	PHEX (ENSPTRG00000021737)	ENSPTRG00000044028	MBTPS2 (ENSPTRG00000021735)	SMPX (ENSPTRG00000047975)	KLHL34 (ENSPTRG00000021733)	CNKSR2 (ENSPTRG00000021731)	RPS6KA3 (ENSPTRG00000052293) #22	ENSPTRG00000021728 #23	MAP7D2 (ENSPTRG00000021727) #24	BCLAF3 (ENSPTRG00000021725) #25	SH3KBP1 (ENSPTRG00000048773) #26	MAP3K15 (ENSPTRG00000022605) #27	PDHA1 (ENSPTRG00000021717) #28	ADGRG2 (ENSPTRG00000021716) #29	PHKA2 (ENSPTRG00000021715) #30	ENSPTRG00000046843	PPEF1 (ENSPTRG00000021714) #32	RS1 (ENSPTRG00000021713) #33	CDKL5 (ENSPTRG00000021711) #34	SCML2 (ENSPTRG00000021710) #35	BEND2 (ENSPTRG00000021708)	SCML1 (ENSPTRG00000021706)
Bonobo	MODERN SPECIES	369	APOO (ENSPPAG00000033503)	SAT1 (ENSPPAG00000035932)	ACOT9 (ENSPPAG00000037237)	PRDX4 (ENSPPAG00000038998)	PTCHD1 (ENSPPAG00000013963)	DDX53 (ENSPPAG00000006869)	ENSPPAG00000031560	CBLL2 (ENSPPAG00000006152)	PHEX (ENSPPAG00000012368)	ENSPPAG00000035805	YY2 (ENSPPAG00000033052)	MBTPS2 (ENSPPAG00000033207)	SMPX (ENSPPAG00000030194)	KLHL34 (ENSPPAG00000025617)	CNKSR2 (ENSPPAG00000037182)	RPS6KA3 (ENSPPAG00000029748) #22	EIF1AX (ENSPPAG00000033962) #23	MAP7D2 (ENSPPAG00000040804) #24	BCLAF3 (ENSPPAG00000040123) #25	SH3KBP1 (ENSPPAG00000037769) #26	MAP3K15 (ENSPPAG00000039708) #27	PDHA1 (ENSPPAG00000032993) #28	ADGRG2 (ENSPPAG00000044060) #29	PHKA2 (ENSPPAG00000036527) #30	ENSPPAG00000027509	PPEF1 (ENSPPAG00000027881) #32	RS1 (ENSPPAG00000040996) #33	CDKL5 (ENSPPAG00000027668) #34	SCML2 (ENSPPAG00000039952) #35	BEND2 (ENSPPAG00000032642)	SCML1 (ENSPPAG00000031177)
Human	MODERN SPECIES	1827	APOO (ENSG00000184831)	ENSG00000288706	SAT1 (ENSG00000130066)	ACOT9 (ENSG00000123130)	PRDX4 (ENSG00000123131)	PTCHD1 (ENSG00000165186)	DDX53 (ENSG00000184735)	CBLL2 (ENSG00000175809)	PHEX (ENSG00000102174)	SMS (ENSG00000102172)	YY2 (ENSG00000230797)	MBTPS2 (ENSG00000012174)	SMPX (ENSG00000091482)	KLHL34 (ENSG00000185915)	CNKSR2 (ENSG00000149970)	RPS6KA3 (ENSG00000177189) #22	EIF1AX (ENSG00000173674) #23	MAP7D2 (ENSG00000184368) #24	BCLAF3 (ENSG00000173681) #25	SH3KBP1 (ENSG00000147010) #26	MAP3K15 (ENSG00000180815) #27	PDHA1 (ENSG00000131828) #28	ADGRG2 (ENSG00000173698) #29	PHKA2 (ENSG00000044446) #30	PPEF1 (ENSG00000086717) #32	RS1 (ENSG00000102104) #33	CDKL5 (ENSG00000008086) #34	SCML2 (ENSG00000102098) #35	BEND2 (ENSG00000177324)	RAI2 (ENSG00000131831)	SCML1 (ENSG00000047634)
Gorilla	MODERN SPECIES	523	CXorf58 (ENSGGOG00000016257)	APOO (ENSGGOG00000001200)	SAT1 (ENSGGOG00000027873)	ACOT9 (ENSGGOG00000015401)	PRDX4 (ENSGGOG00000026790)	PTCHD1 (ENSGGOG00000044059)	ENSGGOG00000036181	ENSGGOG00000026912	CBLL2 (ENSGGOG00000034821)	ENSGGOG00000003961	ENSGGOG00000003123	MBTPS2 (ENSGGOG00000012064)	SMPX (ENSGGOG00000004353)	KLHL34 (ENSGGOG00000002780)	CNKSR2 (ENSGGOG00000013768)	RPS6KA3 (ENSGGOG00000008837) #22	ENSGGOG00000012186 #23	MAP7D2 (ENSGGOG00000007760) #24	BCLAF3 (ENSGGOG00000009453) #25	SH3KBP1 (ENSGGOG00000008333) #26	MAP3K15 (ENSGGOG00000008317) #27	ENSGGOG00000013574 #28	ENSGGOG00000040627	ADGRG2 (ENSGGOG00000003424) #29	PHKA2 (ENSGGOG00000003407) #30	PPEF1 (ENSGGOG00000003393) #32	RS1 (ENSGGOG00000023949) #33	CDKL5 (ENSGGOG00000010796) #34	SCML2 (ENSGGOG00000015959) #35	BEND2 (ENSGGOG00000003458)	SCML1 (ENSGGOG00000003874)
Orangutan	MODERN SPECIES	242	CXorf58 (ENSPPYG00000020192)	APOO (ENSPPYG00000020191)	SAT1 (ENSPPYG00000020190)	ACOT9 (ENSPPYG00000020189)	ENSPPYG00000020188	PTCHD1 (ENSPPYG00000020187)	DDX53 (ENSPPYG00000020185)	ENSPPYG00000036724	CBLL2 (ENSPPYG00000020184)	PHEX (ENSPPYG00000020183)	SMS (ENSPPYG00000020182)	MBTPS2 (ENSPPYG00000020181)	SMPX (ENSPPYG00000020180)	KLHL34 (ENSPPYG00000020179)	CNKSR2 (ENSPPYG00000020178)	RPS6KA3 (ENSPPYG00000020177) #22	EIF1AX (ENSPPYG00000038921) #23	MAP7D2 (ENSPPYG00000020175) #24	BCLAF3 (ENSPPYG00000020174) #25	SH3KBP1 (ENSPPYG00000020173) #26	MAP3K15 (ENSPPYG00000020172) #27	PDHA1 (ENSPPYG00000020171) #28	ADGRG2 (ENSPPYG00000020170) #29	PHKA2 (ENSPPYG00000020169) #30	ENSPPYG00000038507	PPEF1 (ENSPPYG00000020168) #32	RS1 (ENSPPYG00000020167) #33	CDKL5 (ENSPPYG00000020166) #34	SCML2 (ENSPPYG00000020165) #35	BEND2 (ENSPPYG00000020164)	RAI2 (ENSPPYG00000020163)
Gibbon	MODERN SPECIES	449	ZFX (ENSNLEG00000010044)	ENSNLEG00000028019	KLHL15 (ENSNLEG00000010036)	ENSNLEG00000010026	SAT1 (ENSNLEG00000010015)	ACOT9 (ENSNLEG00000010007)	PRDX4 (ENSNLEG00000029389)	PTCHD1 (ENSNLEG00000010004)	ENSNLEG00000027485	ENSNLEG00000018743	PHEX (ENSNLEG00000009980)	SMS (ENSNLEG00000009955)	MBTPS2 (ENSNLEG00000009943)	SMPX (ENSNLEG00000009938)	CNKSR2 (ENSNLEG00000009933)	RPS6KA3 (ENSNLEG00000009925) #22	ENSNLEG00000009913 #23	MAP7D2 (ENSNLEG00000009884) #24	ENSNLEG00000009882	BCLAF3 (ENSNLEG00000009878) #25	SH3KBP1 (ENSNLEG00000009860) #26	MAP3K15 (ENSNLEG00000009849) #27	PDHA1 (ENSNLEG00000009805) #28	ADGRG2 (ENSNLEG00000009745) #29	PHKA2 (ENSNLEG00000009732) #30	ENSNLEG00000029919	PPEF1 (ENSNLEG00000009696) #32	RS1 (ENSNLEG00000009691) #33	CDKL5 (ENSNLEG00000009674) #34	ENSNLEG00000027405	SCML2 (ENSNLEG00000009648) #35
Platyrrhini	ANCESTRAL SPECIES	28	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.d	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00390000003791.g.b	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886.g #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i.a #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000164589	ENSGT00950000182963.b.a
Mas night monkey	MODERN SPECIES	814			ENSANAG00000023417	CBLL2 (ENSANAG00000024818)	PHEX (ENSANAG00000021236)	ENSANAG00000030126	ENSANAG00000032026	SMS (ENSANAG00000031156)	MBTPS2 (ENSANAG00000022738)	ENSANAG00000034743	SMPX (ENSANAG00000035900)	KLHL34 (ENSANAG00000020210)	CNKSR2 (ENSANAG00000030385)	ENSANAG00000019923	ENSANAG00000000067	RPS6KA3 (ENSANAG00000026591) #22	ENSANAG00000025820	ENSANAG00000030856 #23	MAP7D2 (ENSANAG00000037417) #24	ENSANAG00000026646 #25	ENSANAG00000034832 #26	ENSANAG00000030233	MAP3K15 (ENSANAG00000034023) #27	PDHA1 (ENSANAG00000030855) #28	ADGRG2 (ENSANAG00000034597) #29	PHKA2 (ENSANAG00000038435) #30	PPEF1 (ENSANAG00000023404) #32	RS1 (ENSANAG00000029033) #33	CDKL5 (ENSANAG00000034696) #34	SCML2 (ENSANAG00000020966) #35	ENSANAG00000037962
Cebidae	ANCESTRAL SPECIES	18	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.d.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00390000003791.g.b	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886.g #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i.a #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000164589	ENSGT00950000182963.b.a
Marmoset	MODERN SPECIES	78	ACOT9 (ENSCJAG00000040134)	ENSCJAG00000005061	ENSCJAG00000072526	PTCHD1 (ENSCJAG00000005108)	ENSCJAG00000060367	ENSCJAG00000073282	ENSCJAG00000072524	PHEX (ENSCJAG00000005121)	SMS (ENSCJAG00000033933)	MBTPS2 (ENSCJAG00000046733)	SMPX (ENSCJAG00000005203)	KLHL34 (ENSCJAG00000041270)	CNKSR2 (ENSCJAG00000005220)	ENSCJAG00000073658	ENSCJAG00000005365	RPS6KA3 (ENSCJAG00000005239) #22	MAP7D2 (ENSCJAG00000005383) #24	ENSCJAG00000079762	ENSCJAG00000022320	BCLAF3 (ENSCJAG00000045691) #25	ENSCJAG00000005459 #27	ENSCJAG00000005496 #28	ENSCJAG00000073410	ENSCJAG00000072791	ADGRG2 (ENSCJAG00000005571) #29	ENSCJAG00000082522	PHKA2 (ENSCJAG00000005668) #30	PPEF1 (ENSCJAG00000005798) #32	RS1 (ENSCJAG00000005829) #33	CDKL5 (ENSCJAG00000005834) #34	SCML2 (ENSCJAG00000005875) #35
Cebidae_a	ANCESTRAL SPECIES	36	ENSGT00940000158684	ENSGT00550000074801.h.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.h.d.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00390000003791.g.b	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886.g #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i.a #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164688	ENSGT00940000154174.s.a.b	ENSGT00940000164589
Capuchin	MODERN SPECIES	128							ENSCCAG00000024171	PHEX (ENSCCAG00000021705)	SMS (ENSCCAG00000038102)	MBTPS2 (ENSCCAG00000030619)	ENSCCAG00000034966	SMPX (ENSCCAG00000028916)	ENSCCAG00000031773	CNKSR2 (ENSCCAG00000029076)	ENSCCAG00000026463	RPS6KA3 (ENSCCAG00000036661) #22	EIF1AX (ENSCCAG00000020517) #23	MAP7D2 (ENSCCAG00000034873) #24	BCLAF3 (ENSCCAG00000021782) #25	ENSCCAG00000024335 #26	MAP3K15 (ENSCCAG00000019733) #27	ENSCCAG00000020724 #28	ENSCCAG00000025967	ENSCCAG00000033194	ADGRG2 (ENSCCAG00000021576) #29	PHKA2 (ENSCCAG00000037761) #30	PPEF1 (ENSCCAG00000018308) #32	RS1 (ENSCCAG00000037547) #33	CDKL5 (ENSCCAG00000028839) #34	SCML2 (ENSCCAG00000029741) #35	BEND2 (ENSCCAG00000028740)
Bolivian squirrel monkey	MODERN SPECIES	51	CXorf58 (ENSSBOG00000023363)	ENSSBOG00000023578	SAT1 (ENSSBOG00000023952)	ACOT9 (ENSSBOG00000035947)	PRDX4 (ENSSBOG00000026851)	PTCHD1 (ENSSBOG00000022861)	ENSSBOG00000017959	ENSSBOG00000022205	PHEX (ENSSBOG00000035899)	ENSSBOG00000000154	SMS (ENSSBOG00000024222)	MBTPS2 (ENSSBOG00000029363)	SMPX (ENSSBOG00000033495)	CNKSR2 (ENSSBOG00000029741)	ENSSBOG00000018382	RPS6KA3 (ENSSBOG00000034830) #22	ENSSBOG00000029635	ENSSBOG00000031558 #23	MAP7D2 (ENSSBOG00000029797) #24	BCLAF3 (ENSSBOG00000031024) #25	ENSSBOG00000036210 #26	ENSSBOG00000026951	MAP3K15 (ENSSBOG00000023444) #27	PDHA1 (ENSSBOG00000021023) #28	ADGRG2 (ENSSBOG00000036029) #29	PHKA2 (ENSSBOG00000028848) #30	PPEF1 (ENSSBOG00000025564) #32	RS1 (ENSSBOG00000022074) #33	CDKL5 (ENSSBOG00000034927) #34	SCML2 (ENSSBOG00000023475) #35	BEND2 (ENSSBOG00000034571)
Tarsier	MODERN SPECIES	5349																RPS6KA3 (ENSTSYG00000012466) #22	EIF1AX (ENSTSYG00000012460) #23	MAP7D2 (ENSTSYG00000012457) #24	BCLAF3 (ENSTSYG00000004803) #25
Strepsirrhini	ANCESTRAL SPECIES	23	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066.b	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Lemuriformes	ANCESTRAL SPECIES	48	ENSGT00940000158684	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066.b	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164165	ENSGT00950000182963.b.a	ENSGT00940000158080
Mouse lemur	MODERN SPECIES	169	CXorf58 (ENSMICG00000036290)	ENSMICG00000010756	SAT1 (ENSMICG00000028733)	ACOT9 (ENSMICG00000003532)	PRDX4 (ENSMICG00000031550)	PTCHD1 (ENSMICG00000000824)	PHEX (ENSMICG00000000193)	ENSMICG00000000192	ENSMICG00000037442	ENSMICG00000030382	MBTPS2 (ENSMICG00000008917)	ENSMICG00000044479	SMPX (ENSMICG00000008915)	KLHL34 (ENSMICG00000028251)	CNKSR2 (ENSMICG00000002912)	RPS6KA3 (ENSMICG00000004112) #22	EIF1AX (ENSMICG00000004110) #23	MAP7D2 (ENSMICG00000004105) #24	BCLAF3 (ENSMICG00000004101) #25	SH3KBP1 (ENSMICG00000004092) #26	MAP3K15 (ENSMICG00000004080) #27	PDHA1 (ENSMICG00000004067) #28	ADGRG2 (ENSMICG00000004232) #29	PHKA2 (ENSMICG00000004212) #30	PPEF1 (ENSMICG00000004203) #32	RS1 (ENSMICG00000004198) #33	CDKL5 (ENSMICG00000004179) #34	SCML2 (ENSMICG00000027531) #35	ENSMICG00000027086	NHS (ENSMICG00000036975)	REPS2 (ENSMICG00000003790)
Lemuriformes_a	ANCESTRAL SPECIES	204																ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT01090000260070.A	ENSGT00940000153528.a.b.a.b	ENSGT00940000159407 #35
Greater bamboo lemur	MODERN SPECIES	897																RPS6KA3 (ENSPSMG00000012048) #22	ENSPSMG00000012611 #23	ENSPSMG00000012718	MAP7D2 (ENSPSMG00000012793) #24	BCLAF3 (ENSPSMG00000012870) #25
Bushbaby	MODERN SPECIES	166	APOO (ENSOGAG00000001960)	SAT1 (ENSOGAG00000010447)	ACOT9 (ENSOGAG00000002305)	PRDX4 (ENSOGAG00000011610)	ENSOGAG00000026297	ENSOGAG00000034242	PTCHD1 (ENSOGAG00000016650)	ENSOGAG00000026282	PHEX (ENSOGAG00000010894)	ENSOGAG00000010892	MBTPS2 (ENSOGAG00000011151)	SMPX (ENSOGAG00000015469)	KLHL34 (ENSOGAG00000027270)	CNKSR2 (ENSOGAG00000015464)	ENSOGAG00000032783	RPS6KA3 (ENSOGAG00000008184) #22	ENSOGAG00000008182 #23	ENSOGAG00000033040	MAP7D2 (ENSOGAG00000008176) #24	BCLAF3 (ENSOGAG00000008168) #25	SH3KBP1 (ENSOGAG00000002469) #26	MAP3K15 (ENSOGAG00000002467) #27	PDHA1 (ENSOGAG00000002466) #28	ADGRG2 (ENSOGAG00000011733) #29	PHKA2 (ENSOGAG00000002436) #30	PPEF1 (ENSOGAG00000002431) #32	RS1 (ENSOGAG00000002430) #33	CDKL5 (ENSOGAG00000002429) #34	ENSOGAG00000031862	SCML2 (ENSOGAG00000012455) #35	ENSOGAG00000012713
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Tree shrew	MODERN SPECIES	3935																RPS6KA3 (ENSTBEG00000017583) #22	EIF1AX (ENSTBEG00000017492) #23	MAP7D2 (ENSTBEG00000017363) #24	BCLAF3 (ENSTBEG00000016865) #25
Glires	ANCESTRAL SPECIES	10	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00550000074801.g.b.f	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a	ENSGT00940000158080
Hystricomorpha_a	ANCESTRAL SPECIES	60	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000154763.mb	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	73	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000154763.mb	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00950000182963.b.a	ENSGT00940000158080
Degu	MODERN SPECIES	51	ENSODEG00000017745	RAB11FIP2 (ENSODEG00000017734)	EMX2 (ENSODEG00000017809)	PDZD8 (ENSODEG00000017906)	ENSODEG00000017723	ENSODEG00000017676	SLC18A2 (ENSODEG00000017927)	ENSODEG00000017686	VAX1 (ENSODEG00000017835)	ENSODEG00000017629	ENSODEG00000017664	ENSODEG00000017934	ENO4 (ENSODEG00000017769)	HSPA12A (ENSODEG00000017751)	C10orf82 (ENSODEG00000017640)	RPS6KA3 (ENSODEG00000017781) #22	ENSODEG00000017687 #23	MAP7D2 (ENSODEG00000017740) #24	ENSODEG00000017632	BCLAF3 (ENSODEG00000018128) #25	SH3KBP1 (ENSODEG00000017905) #26	MAP3K15 (ENSODEG00000017836) #27	ENSODEG00000017773 #28
Long-tailed chinchilla	MODERN SPECIES	216	KLHL15 (ENSCLAG00000001609)	CXorf58 (ENSCLAG00000001251)	APOO (ENSCLAG00000001143)	SAT1 (ENSCLAG00000002420)	ACOT9 (ENSCLAG00000002263)	PRDX4 (ENSCLAG00000002107)	PTCHD1 (ENSCLAG00000002022)	ENSCLAG00000017424	PHEX (ENSCLAG00000000629)	SMS (ENSCLAG00000000492)	ENSCLAG00000000440	MBTPS2 (ENSCLAG00000001960)	SMPX (ENSCLAG00000000955)	KLHL34 (ENSCLAG00000017438)	CNKSR2 (ENSCLAG00000000928)	RPS6KA3 (ENSCLAG00000000667) #22	EIF1AX (ENSCLAG00000000709) #23	MAP7D2 (ENSCLAG00000001716) #24	BCLAF3 (ENSCLAG00000001580) #25	SH3KBP1 (ENSCLAG00000001780) #26
Guinea pig	MODERN SPECIES	59	EIF2S3B (ENSCPOG00000000660)	KLHL15 (ENSCPOG00000040332)	ENSCPOG00000014536	ENSCPOG00000004197	SAT1 (ENSCPOG00000037886)	ACOT9 (ENSCPOG00000004188)	PRDX4 (ENSCPOG00000004185)	PTCHD1 (ENSCPOG00000035225)	ENSCPOG00000013960	PHEX (ENSCPOG00000006183)	ENSCPOG00000006176	MBTPS2 (ENSCPOG00000006171)	SMPX (ENSCPOG00000033393)	KLHL34 (ENSCPOG00000035985)	CNKSR2 (ENSCPOG00000009806)	RPS6KA3 (ENSCPOG00000008719) #22	EIF1AX (ENSCPOG00000039205) #23	MAP7D2 (ENSCPOG00000008706) #24	BCLAF3 (ENSCPOG00000008695) #25	SH3KBP1 (ENSCPOG00000006433) #26	MAP3K15 (ENSCPOG00000011102) #27	ENSCPOG00000009280 #28	ADGRG2 (ENSCPOG00000011079) #29	PHKA2 (ENSCPOG00000011064) #30	PPEF1 (ENSCPOG00000006617) #32	RS1 (ENSCPOG00000007446) #33	CDKL5 (ENSCPOG00000007438) #34	RAI2 (ENSCPOG00000015535)	ENSCPOG00000038636	NHS (ENSCPOG00000020088)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000044443	ENSHGLG00000040071	ENSHGLG00000001166	ENSHGLG00000001331	ENSHGLG00000045573	ENSHGLG00000049321	ENSHGLG00000032273 #35	ENSHGLG00000038266	CDKL5 (ENSHGLG00000001743) #34	RS1 (ENSHGLG00000001057) #33	PPEF1 (ENSHGLG00000001185) #32	ENSHGLG00000001092	PHKA2 (ENSHGLG00000001760) #30	ENSHGLG00000015862 #29	ENSHGLG00000001460	ENSHGLG00000001399 #22	ENSHGLG00000034312 #23	MAP7D2 (ENSHGLG00000001155) #24	BCLAF3 (ENSHGLG00000001058) #25	ENSHGLG00000038256	ENSHGLG00000000866 #26	ENSHGLG00000000584 #27	ENSHGLG00000020000	ENSHGLG00000000543 #28	ENSHGLG00000044116	ENSHGLG00000050318	ENSHGLG00000000563	ENSHGLG00000020425	ENSHGLG00000033146	ENSHGLG00000003413	PHEX (ENSHGLG00000003219)
Sciuridae	ANCESTRAL SPECIES	28	ENSGT00530000063666.b.l.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164589	ENSGT00950000182963.b.a
Marmotini	ANCESTRAL SPECIES	58	ENSGT00530000063666.b.l.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000153648.a.f	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Alpin marmot	MODERN SPECIES	21	ENSMMMG00000008424	ACOT9 (ENSMMMG00000008333)	ENSMMMG00000008328	PRDX4 (ENSMMMG00000008312)	ENSMMMG00000008306	PTCHD1 (ENSMMMG00000008301)	ENSMMMG00000008274	PHEX (ENSMMMG00000008240)	SMS (ENSMMMG00000008225)	ENSMMMG00000008215	ENSMMMG00000008211	MBTPS2 (ENSMMMG00000008190)	SMPX (ENSMMMG00000008177)	KLHL34 (ENSMMMG00000008160)	CNKSR2 (ENSMMMG00000008093)	RPS6KA3 (ENSMMMG00000008009) #22	EIF1AX (ENSMMMG00000007975) #23	MAP7D2 (ENSMMMG00000007516) #24	ENSMMMG00000007500	BCLAF3 (ENSMMMG00000007465) #25	ENSMMMG00000007426	SH3KBP1 (ENSMMMG00000007298) #26	MAP3K15 (ENSMMMG00000007247) #27	ENSMMMG00000007196 #28	ADGRG2 (ENSMMMG00000006314) #29	PHKA2 (ENSMMMG00000006185) #30	PPEF1 (ENSMMMG00000006165) #32	RS1 (ENSMMMG00000006144) #33	CDKL5 (ENSMMMG00000006110) #34	ENSMMMG00000006089	SCML2 (ENSMMMG00000006071) #35
Marmotini_b	ANCESTRAL SPECIES	69	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.l.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153680.a	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000153648.a.f	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Squirrel	MODERN SPECIES	224	EIF2S3B (ENSSTOG00000007144)	KLHL15 (ENSSTOG00000002209)	CXorf58 (ENSSTOG00000002201)	ENSSTOG00000026298	ENSSTOG00000002062	SAT1 (ENSSTOG00000019590)	ACOT9 (ENSSTOG00000002034)	PRDX4 (ENSSTOG00000002028)	PTCHD1 (ENSSTOG00000024846)	ENSSTOG00000027719	PHEX (ENSSTOG00000006838)	ENSSTOG00000034135	MBTPS2 (ENSSTOG00000010473)	SMPX (ENSSTOG00000002549)	CNKSR2 (ENSSTOG00000011389)	RPS6KA3 (ENSSTOG00000010494) #22	EIF1AX (ENSSTOG00000026117) #23	MAP7D2 (ENSSTOG00000013888) #24	BCLAF3 (ENSSTOG00000020416) #25	ENSSTOG00000031367	SH3KBP1 (ENSSTOG00000024324) #26
Arctic ground squirrel	MODERN SPECIES	319																RPS6KA3 (ENSUPAG00010016233) #22	ENSUPAG00010016262 #23	MAP7D2 (ENSUPAG00010016279) #24	ENSUPAG00010016489	BCLAF3 (ENSUPAG00010016497) #25	SH3KBP1 (ENSUPAG00010016531) #26	MAP3K15 (ENSUPAG00010016860) #27	PDHA1 (ENSUPAG00010016887) #28	ENSUPAG00010016903	ADGRG2 (ENSUPAG00010016925) #29	PHKA2 (ENSUPAG00010017499) #30
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005022952	SAT1 (ENSSVLG00005023019)	ACOT9 (ENSSVLG00005023115)	ENSSVLG00005023374	PRDX4 (ENSSVLG00005023403)	PTCHD1 (ENSSVLG00005023442)	ENSSVLG00005023477	PHEX (ENSSVLG00005023506)	SMS (ENSSVLG00005023626)	ENSSVLG00005023650	ENSSVLG00005023659	MBTPS2 (ENSSVLG00005023689)	SMPX (ENSSVLG00005023721)	KLHL34 (ENSSVLG00005023744)	CNKSR2 (ENSSVLG00005023957)	RPS6KA3 (ENSSVLG00005024949) #22	ENSSVLG00005024989 #23	MAP7D2 (ENSSVLG00005025072) #24	ENSSVLG00005025208	ENSSVLG00005025223	BCLAF3 (ENSSVLG00005025243) #25	SH3KBP1 (ENSSVLG00005025277) #26	MAP3K15 (ENSSVLG00005025353) #27	PDHA1 (ENSSVLG00005025396) #28	ENSSVLG00005025413	ADGRG2 (ENSSVLG00005025609) #29	PHKA2 (ENSSVLG00005025821) #30	PPEF1 (ENSSVLG00005025839) #32	RS1 (ENSSVLG00005025848) #33	CDKL5 (ENSSVLG00005025859) #34	SCML2 (ENSSVLG00005025874) #35
Rodentia_B	ANCESTRAL SPECIES	31	ENSGT00940000158684	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Kangaroo rat	MODERN SPECIES	413	Eif2s3y (ENSDORG00000007498)	Klhl15 (ENSDORG00000028113)	Apoo (ENSDORG00000015741)	Sat1 (ENSDORG00000028241)	ENSDORG00000002910	Prdx4 (ENSDORG00000002908)	Ptchd1 (ENSDORG00000004212)	Phex (ENSDORG00000010976)	ENSDORG00000025753	ENSDORG00000016069	Yy2 (ENSDORG00000011068)	Mbtps2 (ENSDORG00000011065)	Smpx (ENSDORG00000003075)	Cnksr2 (ENSDORG00000010230)	ENSDORG00000029700	Rps6ka3 (ENSDORG00000011802) #22	ENSDORG00000011536 #23	Map7d2 (ENSDORG00000007990) #24	Bclaf3 (ENSDORG00000007988) #25	Sh3kbp1 (ENSDORG00000005919) #26	Map3k15 (ENSDORG00000011849) #27	Pdha1 (ENSDORG00000011848) #28	Adgrg2 (ENSDORG00000003270) #29	ENSDORG00000026958 #30	ENSDORG00000011776 #32
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000158684	ENSGT00550000074801.g.b.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Muroidea	ANCESTRAL SPECIES	30	ENSGT00940000158684	ENSGT00550000074801.g.b.d	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00390000005717.e.a.b	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000005717.e.b.a	ENSGT00390000005717.e.b.b.a	ENSGT00390000005717.e.b.b.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000159832	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000005717.e.b.a	ENSGT00390000005717.e.b.b.a	ENSGT00390000005717.e.b.b.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.cc.a	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00390000008256.j.a.a #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d
Cricetinae	ANCESTRAL SPECIES	17	ENSGT00940000158538	ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.a	ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d	ENSGT00940000159832	ENSGT00940000153421.a.a.a.a.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.cc.a	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Golden Hamster	MODERN SPECIES	661						ENSMAUG00000007368	ENSMAUG00000007163	Phex (ENSMAUG00000016421)	Sms (ENSMAUG00000017854)	Yy2 (ENSMAUG00000016161)	Mbtps2 (ENSMAUG00000017121)	Smpx (ENSMAUG00000016078)	Cnksr2 (ENSMAUG00000021259)	ENSMAUG00000008169	ENSMAUG00000017351	Rps6ka3 (ENSMAUG00000015390) #22	ENSMAUG00000012396 #23	ENSMAUG00000007856	Map7d2 (ENSMAUG00000016214) #24	ENSMAUG00000009356	Sh3kbp1 (ENSMAUG00000017328) #26	Map3k15 (ENSMAUG00000006183) #27	Pdha1 (ENSMAUG00000002413) #28	Adgrg2 (ENSMAUG00000001544) #29	Phka2 (ENSMAUG00000001285) #30	Ppef1 (ENSMAUG00000016981) #32	Rs1 (ENSMAUG00000017955) #33	Gja6 (ENSMAUG00000016764)	Cdkl5 (ENSMAUG00000009424) #34	ENSMAUG00000014559	Rai2 (ENSMAUG00000010443)
Chinese hamster chok1gshd	MODERN SPECIES	230	ENSCGRG00001013899	Cldn34d (ENSCGRG00001014236)	ENSCGRG00001013998	SAT1 (ENSCGRG00001022103)	ENSCGRG00001000350	Prdx4 (ENSCGRG00001009299)	Ptchd1 (ENSCGRG00001010854)	ENSCGRG00001015828	ENSCGRG00001015986	Phex (ENSCGRG00001019759)	ENSCGRG00001000646	MBTPS2 (ENSCGRG00001018020)	Smpx (ENSCGRG00001020401)	Klhl34 (ENSCGRG00001014357)	Cnksr2 (ENSCGRG00001022169)	Rps6ka3 (ENSCGRG00001007518) #22	ENSCGRG00001022852 #23	Map7d2 (ENSCGRG00001005576) #24	Bclaf3 (ENSCGRG00001017632) #25	Sh3kbp1 (ENSCGRG00001012962) #26	Map3k15 (ENSCGRG00001017037) #27	Pdha1 (ENSCGRG00001020742) #28	ENSCGRG00001020861	Adgrg2 (ENSCGRG00001022355) #29	Phka2 (ENSCGRG00001021729) #30	Ppef1 (ENSCGRG00001015088) #32	Rs1 (ENSCGRG00001017692) #33	Cdkl5 (ENSCGRG00001020755) #34	Scml2 (ENSCGRG00001017848) #35	ENSCGRG00001012613	Rai2 (ENSCGRG00001015408)
Cricetidae_B	ANCESTRAL SPECIES	36	ENSGT00940000159832	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000005717.e.b.a	ENSGT00390000005717.e.b.b.a	ENSGT00390000005717.e.b.b.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506.cc.a	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.a.a #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Prairie vole	MODERN SPECIES	360	Sat1 (ENSMOCG00000012276)	ENSMOCG00000002108	Prdx4 (ENSMOCG00000014602)	Ptchd1 (ENSMOCG00000020483)	ENSMOCG00000017700	ENSMOCG00000012478	ENSMOCG00000006009	Phex (ENSMOCG00000021326)	Sms (ENSMOCG00000016092)	Yy2 (ENSMOCG00000013780)	Mbtps2 (ENSMOCG00000016533)	Smpx (ENSMOCG00000009712)	Cnksr2 (ENSMOCG00000000158)	ENSMOCG00000017907	ENSMOCG00000016797	Rps6ka3 (ENSMOCG00000012164) #22	ENSMOCG00000013551 #23	ENSMOCG00000004138	Map7d2 (ENSMOCG00000019149) #24	Bclaf3 (ENSMOCG00000005833) #25	Sh3kbp1 (ENSMOCG00000020425) #26	Map3k15 (ENSMOCG00000013071) #27	Pdha1 (ENSMOCG00000002601) #28	Adgrg2 (ENSMOCG00000011315) #29	Phka2 (ENSMOCG00000021208) #30	Ppef1 (ENSMOCG00000019014) #32	Rs1 (ENSMOCG00000012992) #33	Cdkl5 (ENSMOCG00000014110) #34	Scml2 (ENSMOCG00000004081) #35	Bend2 (ENSMOCG00000002447)	Rai2 (ENSMOCG00000020088)
Northern American deer mouse	MODERN SPECIES	475	ENSPEMG00000025993	Sat1 (ENSPEMG00000001319)	ENSPEMG00000002650	ENSPEMG00000028779	ENSPEMG00000017644	Prdx4 (ENSPEMG00000015131)	Ptchd1 (ENSPEMG00000024561)	Phex (ENSPEMG00000017527)	Sms (ENSPEMG00000003756)	Mbtps2 (ENSPEMG00000012008)	ENSPEMG00000026716	Smpx (ENSPEMG00000011852)	Klhl34 (ENSPEMG00000026377)	Cnksr2 (ENSPEMG00000012770)	ENSPEMG00000026965	Rps6ka3 (ENSPEMG00000018584) #22	ENSPEMG00000026098 #23	Map7d2 (ENSPEMG00000000311) #24	Bclaf3 (ENSPEMG00000008136) #25	Sh3kbp1 (ENSPEMG00000007129) #26	Map3k15 (ENSPEMG00000012858) #27	Pdha1 (ENSPEMG00000008945) #28	ENSPEMG00000026878	Adgrg2 (ENSPEMG00000001110) #29	Phka2 (ENSPEMG00000004706) #30	Ppef1 (ENSPEMG00000012697) #32	Rs1 (ENSPEMG00000008058) #33	Cdkl5 (ENSPEMG00000002138) #34	ENSPEMG00000030730 #35	Bend2 (ENSPEMG00000011757)	Rai2 (ENSPEMG00000008659)
Murinae	ANCESTRAL SPECIES	32						ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Mus	ANCESTRAL SPECIES	9	ENSGT00520000056155.g.b.a.b	ENSGT00520000056155.g.a.c.a	ENSGT00390000005717.e.b.b.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00860000136365	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00950000182987.c.a.a.o.b.h	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Mus_A	ANCESTRAL SPECIES	15	ENSGT00520000056155.g.b.a.b	ENSGT00520000056155.g.a.c.a	ENSGT00390000005717.e.b.b.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00860000136365	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00950000182987.c.a.a.o.b.h	ENSGT00940000159370 #22	ENSGT00390000008256.j.a.a #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Mus_B	ANCESTRAL SPECIES	14	ENSGT00520000056155.g.b.a.a	ENSGT00520000056155.g.a.c.a.a	ENSGT00390000005717.e.b.b.a.f	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.bb	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00860000136365	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00950000182987.c.a.a.o.b.h	ENSGT00940000159370 #22	ENSGT00390000008256.j.b #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Mouse	MODERN SPECIES	37	Magea5 (ENSMUSG00000079349)	Magea1 (ENSMUSG00000096644)	Cldn34b2 (ENSMUSG00000057402)	Sat1 (ENSMUSG00000025283)	Acot9 (ENSMUSG00000025287)	Prdx4 (ENSMUSG00000025289)	Ptchd1 (ENSMUSG00000041552)	Gm15155 (ENSMUSG00000055109)	Phex (ENSMUSG00000057457)	Sms (ENSMUSG00000071708)	Mbtps2 (ENSMUSG00000046873)	Yy2 (ENSMUSG00000091736)	Smpx (ENSMUSG00000041476)	Klhl34 (ENSMUSG00000047485)	Cnksr2 (ENSMUSG00000025658)	Rps6ka3 (ENSMUSG00000031309) #22	Eif1ax (ENSMUSG00000067194) #23	Map7d2 (ENSMUSG00000041020) #24	Bclaf3 (ENSMUSG00000044150) #25	Sh3kbp1 (ENSMUSG00000040990) #26	Map3k15 (ENSMUSG00000031303) #27	Pdha1 (ENSMUSG00000031299) #28	Adgrg2 (ENSMUSG00000031298) #29	Phka2 (ENSMUSG00000031295) #30	Ppef1 (ENSMUSG00000062168) #32	Rs1 (ENSMUSG00000031293) #33	Cdkl5 (ENSMUSG00000031292) #34	Gja6 (ENSMUSG00000055691)	Scml2 (ENSMUSG00000000037) #35	Bend2 (ENSMUSG00000108981)	Rai2 (ENSMUSG00000043518)
Mus_C	ANCESTRAL SPECIES	22	ENSGT00940000163673	ENSGT00390000004891	ENSGT00950000182925.D.a.b.a.a.a.b.a.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.bb	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00860000136365	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00950000182987.c.a.a.o.b.h	ENSGT00940000159370 #22	ENSGT00390000008256.j.a.a #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00950000182963.b.a	ENSGT00940000158080
spretus	MODERN SPECIES	19	Spin2c (MGP_SPRETEiJ_G0034685)	Samt4 (MGP_SPRETEiJ_G0034686)	Sat1 (MGP_SPRETEiJ_G0034687)	Acot9 (MGP_SPRETEiJ_G0034688)	Prdx4 (MGP_SPRETEiJ_G0034689)	Ptchd1 (MGP_SPRETEiJ_G0034690)	MGP_SPRETEiJ_G0034691	Phex (MGP_SPRETEiJ_G0034692)	Sms (MGP_SPRETEiJ_G0034693)	Mbtps2 (MGP_SPRETEiJ_G0034694)	Yy2 (MGP_SPRETEiJ_G0034695)	Smpx (MGP_SPRETEiJ_G0034696)	Klhl34 (MGP_SPRETEiJ_G0034697)	Cnksr2 (MGP_SPRETEiJ_G0034698)	MGP_SPRETEiJ_G0034699	Rps6ka3 (MGP_SPRETEiJ_G0034700) #22	MGP_SPRETEiJ_G0034701 #23	Map7d2 (MGP_SPRETEiJ_G0034702) #24	Bclaf3 (MGP_SPRETEiJ_G0034703) #25	Sh3kbp1 (MGP_SPRETEiJ_G0034704) #26	Map3k15 (MGP_SPRETEiJ_G0034705) #27	Pdha1 (MGP_SPRETEiJ_G0034706) #28	Adgrg2 (MGP_SPRETEiJ_G0034707) #29	Phka2 (MGP_SPRETEiJ_G0034708) #30	Ppef1 (MGP_SPRETEiJ_G0034709) #32	Rs1 (MGP_SPRETEiJ_G0034710) #33	Cdkl5 (MGP_SPRETEiJ_G0034711) #34	Gja6 (MGP_SPRETEiJ_G0034712)	MGP_SPRETEiJ_G0034713 #35	Rai2 (MGP_SPRETEiJ_G0034714)	Nhs (MGP_SPRETEiJ_G0034715)
Steppe mouse	MODERN SPECIES	1768																Rps6ka3 (ENSMSIG00000026509) #22
Ryukyu mouse	MODERN SPECIES	19	Spin2c (MGP_CAROLIEiJ_G0033515)	Sat1 (MGP_CAROLIEiJ_G0033516)	MGP_CAROLIEiJ_G0033517	MGP_CAROLIEiJ_G0033518	Prdx4 (MGP_CAROLIEiJ_G0033519)	Ptchd1 (MGP_CAROLIEiJ_G0033520)	MGP_CAROLIEiJ_G0033521	Phex (MGP_CAROLIEiJ_G0033522)	Sms (MGP_CAROLIEiJ_G0033523)	Mbtps2 (MGP_CAROLIEiJ_G0033524)	Yy2 (MGP_CAROLIEiJ_G0033525)	Smpx (MGP_CAROLIEiJ_G0033526)	Klhl34 (MGP_CAROLIEiJ_G0033527)	Cnksr2 (MGP_CAROLIEiJ_G0033528)	MGP_CAROLIEiJ_G0033529	Rps6ka3 (MGP_CAROLIEiJ_G0033530) #22	MGP_CAROLIEiJ_G0033531 #23	Map7d2 (MGP_CAROLIEiJ_G0033532) #24	Bclaf3 (MGP_CAROLIEiJ_G0033533) #25	Sh3kbp1 (MGP_CAROLIEiJ_G0033534) #26	Map3k15 (MGP_CAROLIEiJ_G0033535) #27	Pdha1 (MGP_CAROLIEiJ_G0033536) #28	Adgrg2 (MGP_CAROLIEiJ_G0033537) #29	Phka2 (MGP_CAROLIEiJ_G0033538) #30	Ppef1 (MGP_CAROLIEiJ_G0033539) #32	Rs1 (MGP_CAROLIEiJ_G0033540) #33	Cdkl5 (MGP_CAROLIEiJ_G0033541) #34	Gja6 (MGP_CAROLIEiJ_G0033542)	MGP_CAROLIEiJ_G0033543 #35	Rai2 (MGP_CAROLIEiJ_G0033544)	Nhs (MGP_CAROLIEiJ_G0033545)
Shrew mouse	MODERN SPECIES	23	MGP_PahariEiJ_G0032054	MGP_PahariEiJ_G0032055	MGP_PahariEiJ_G0032056	Sat1 (MGP_PahariEiJ_G0032057)	Prdx4 (MGP_PahariEiJ_G0032058)	Ptchd1 (MGP_PahariEiJ_G0032059)	MGP_PahariEiJ_G0032060	Phex (MGP_PahariEiJ_G0032061)	Sms (MGP_PahariEiJ_G0032062)	Mbtps2 (MGP_PahariEiJ_G0032063)	Yy2 (MGP_PahariEiJ_G0032064)	Smpx (MGP_PahariEiJ_G0032065)	Klhl34 (MGP_PahariEiJ_G0032066)	Cnksr2 (MGP_PahariEiJ_G0032067)	MGP_PahariEiJ_G0032068	Rps6ka3 (MGP_PahariEiJ_G0032069) #22	MGP_PahariEiJ_G0032070 #23	Map7d2 (MGP_PahariEiJ_G0032071) #24	Bclaf3 (MGP_PahariEiJ_G0032072) #25	Sh3kbp1 (MGP_PahariEiJ_G0032073) #26	Map3k15 (MGP_PahariEiJ_G0032074) #27	Pdha1 (MGP_PahariEiJ_G0032075) #28	Adgrg2 (MGP_PahariEiJ_G0032076) #29	Phka2 (MGP_PahariEiJ_G0032077) #30	Ppef1 (MGP_PahariEiJ_G0032078) #32	Rs1 (MGP_PahariEiJ_G0032079) #33	Cdkl5 (MGP_PahariEiJ_G0032080) #34	Gja6 (MGP_PahariEiJ_G0032081)	MGP_PahariEiJ_G0032082 #35	Rai2 (MGP_PahariEiJ_G0032083)	Nhs (MGP_PahariEiJ_G0032084)
Rat	MODERN SPECIES	46	Prdx4 (ENSRNOG00000003763)	Magea8 (ENSRNOG00000066429)	ENSRNOG00000067126	Ptchd1 (ENSRNOG00000069252)	ENSRNOG00000064829	LOC100361934 (ENSRNOG00000034182)	ENSRNOG00000067646	Phex (ENSRNOG00000023440)	Sms (ENSRNOG00000007688)	Yy2 (ENSRNOG00000007644)	ENSRNOG00000068938	Smpx (ENSRNOG00000007495)	Klhl34 (ENSRNOG00000024479)	Cnksr2 (ENSRNOG00000007014)	ENSRNOG00000062879	Rps6ka3 (ENSRNOG00000006632) #22	Eif1ax (ENSRNOG00000005736) #23	Map7d2 (ENSRNOG00000005176) #24	Bclaf3 (ENSRNOG00000005135) #25	Sh3kbp1 (ENSRNOG00000004322) #26	ENSRNOG00000066262	Map3k15 (ENSRNOG00000025290) #27	Pdha1 (ENSRNOG00000025383) #28	Lamtor1 (ENSRNOG00000004319)	ENSRNOG00000069571	Rps27a-ps5 (ENSRNOG00000032132)	Adgrg2 (ENSRNOG00000032472) #29	AABR07037995.1 (ENSRNOG00000003949) #30	Ppef1 (ENSRNOG00000027331) #32	ENSRNOG00000065877	Rs1 (ENSRNOG00000030434) #33
Upper Galilee mountains blind mole rat	MODERN SPECIES	931															Cnksr2 (ENSNGAG00000009070)	Rps6ka3 (ENSNGAG00000019940) #22	Eif1ax (ENSNGAG00000018551) #23	Map7d2 (ENSNGAG00000016712) #24	Bclaf3 (ENSNGAG00000015524) #25	Sh3kbp1 (ENSNGAG00000021155) #26	Map3k15 (ENSNGAG00000018804) #27	Pdha1 (ENSNGAG00000015013) #28	Adgrg2 (ENSNGAG00000011202) #29	ENSNGAG00000017231 #30	Ppef1 (ENSNGAG00000014571) #32	Rs1 (ENSNGAG00000010391) #33	Cdkl5 (ENSNGAG00000010787) #34
Lesser Egyptian jerboa	MODERN SPECIES	192									Smpx (ENSJJAG00000015249)	Cnksr2 (ENSJJAG00000016115)	ENSJJAG00000011807	ENSJJAG00000016309	ENSJJAG00000016365	ENSJJAG00000016502	ENSJJAG00000011798	Rps6ka3 (ENSJJAG00000016899) #22	Eif1ax (ENSJJAG00000016949) #23	Map7d2 (ENSJJAG00000017202) #24	Tmem47 (ENSJJAG00000017721)	ENSJJAG00000018035
Lagomorpha	ANCESTRAL SPECIES	49	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Rabbit	MODERN SPECIES	1401	ENSOCUG00000009645	ACOT9 (ENSOCUG00000004779)	PRDX4 (ENSOCUG00000004786)	ENSOCUG00000037984	ENSOCUG00000022336	ENSOCUG00000032925	PTCHD1 (ENSOCUG00000014375)	ENSOCUG00000004437	PHEX (ENSOCUG00000006020)	SMS (ENSOCUG00000006016)	MBTPS2 (ENSOCUG00000016386)	SMPX (ENSOCUG00000001849)	KLHL34 (ENSOCUG00000014678)	CNKSR2 (ENSOCUG00000014660)	ENSOCUG00000027568	RPS6KA3 (ENSOCUG00000025948) #22	MAP7D2 (ENSOCUG00000016736) #24	BCLAF3 (ENSOCUG00000015294) #25	SH3KBP1 (ENSOCUG00000006268) #26	MAP3K15 (ENSOCUG00000014758) #27	PDHA1 (ENSOCUG00000014748) #28	ADGRG2 (ENSOCUG00000007324) #29	PPEF1 (ENSOCUG00000010801) #32	PHKA2 (ENSOCUG00000013782) #30	RS1 (ENSOCUG00000010796) #33	CDKL5 (ENSOCUG00000010775) #34	SCML2 (ENSOCUG00000007351) #35	ENSOCUG00000013622	RAI2 (ENSOCUG00000026517)	ENSOCUG00000021853	ENSOCUG00000028121
Laurasiatheria	ANCESTRAL SPECIES	16	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Eulipotyphla	ANCESTRAL SPECIES	2113																ENSGT00940000159370 #22	ENSGT00390000008256 #23
Hedgehog	MODERN SPECIES	7126																RPS6KA3 (ENSEEUG00000003863) #22
Common shrew	MODERN SPECIES	5367																RPS6KA3 (ENSSARG00000013531) #22	EIF1AX (ENSSARG00000013528) #23
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Carnivora	ANCESTRAL SPECIES	11	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Caniformia	ANCESTRAL SPECIES	26	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506.s	ENSGT00940000167584.b	ENSGT00870000136506.r.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Caniformia_b	ANCESTRAL SPECIES	24	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506.s	ENSGT00940000167584.b	ENSGT00870000136506.r.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Ursidae	ANCESTRAL SPECIES	28	ENSGT00950000183121.b.b.b.b	ENSGT00950000185751	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506.s	ENSGT00940000167584.b	ENSGT00870000136506.r.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181.f #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Ursus	ANCESTRAL SPECIES	47	ENSGT00940000154738.a	ENSGT00940000155419.r	ENSGT00940000162514	ENSGT00940000156003	ENSGT00550000074844	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT00950000186265	ENSGT01070000253775.a.d.a.a.a.a.k	ENSGT00940000157313	ENSGT00870000136506.s	ENSGT00870000136506.r.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181.f #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000164165	ENSGT00950000182963.b.a	ENSGT00940000158080
Polar bear	MODERN SPECIES	199	SAT1 (ENSUMAG00000011528)	ENSUMAG00000011523	ACOT9 (ENSUMAG00000011514)	PRDX4 (ENSUMAG00000011507)	ENSUMAG00000011461	PTCHD1 (ENSUMAG00000011456)	ENSUMAG00000011448	ENSUMAG00000011422	ENSUMAG00000011412	PHEX (ENSUMAG00000011248)	SMS (ENSUMAG00000011225)	ENSUMAG00000011222	MBTPS2 (ENSUMAG00000011194)	SMPX (ENSUMAG00000011168)	CNKSR2 (ENSUMAG00000010845)	RPS6KA3 (ENSUMAG00000010772) #22	ENSUMAG00000010717 #23	MAP7D2 (ENSUMAG00000010703) #24	BCLAF3 (ENSUMAG00000010697) #25	SH3KBP1 (ENSUMAG00000010682) #26	MAP3K15 (ENSUMAG00000010492) #27	PDHA1 (ENSUMAG00000010424) #28	ADGRG2 (ENSUMAG00000010103) #29	PHKA2 (ENSUMAG00000009067) #30	PPEF1 (ENSUMAG00000008931) #32	RS1 (ENSUMAG00000008917) #33	CDKL5 (ENSUMAG00000008854) #34	SCML2 (ENSUMAG00000008801) #35	ENSUMAG00000008787	NHS (ENSUMAG00000008784)	REPS2 (ENSUMAG00000008763)
American black bear	MODERN SPECIES	5430																RPS6KA3 (ENSUAMG00000023276) #22	EIF1AX (ENSUAMG00000023272) #23
Giant Panda	MODERN SPECIES	2288	ENSAMEG00000012745	ENSAMEG00000024779	ENSAMEG00000012749	ACOT9 (ENSAMEG00000012778)	PRDX4 (ENSAMEG00000012797)	ENSAMEG00000026223	PTCHD1 (ENSAMEG00000014696)	ENSAMEG00000019953	ENSAMEG00000011652	PHEX (ENSAMEG00000016398)	SMS (ENSAMEG00000016423)	ENSAMEG00000016444	SMPX (ENSAMEG00000016467)	KLHL34 (ENSAMEG00000016476)	CNKSR2 (ENSAMEG00000016482)	RPS6KA3 (ENSAMEG00000016514) #22	ENSAMEG00000028944 #23	MAP7D2 (ENSAMEG00000016615) #24	BCLAF3 (ENSAMEG00000016629) #25	SH3KBP1 (ENSAMEG00000016636) #26	MAP3K15 (ENSAMEG00000016682) #27	PDHA1 (ENSAMEG00000016730) #28	ADGRG2 (ENSAMEG00000016754) #29	PHKA2 (ENSAMEG00000016774) #30	PPEF1 (ENSAMEG00000016806) #32	RS1 (ENSAMEG00000016826) #33	CDKL5 (ENSAMEG00000016835) #34	SCML2 (ENSAMEG00000016850) #35	ENSAMEG00000029358	RAI2 (ENSAMEG00000018565)	ENSAMEG00000002958
Mustelinae	ANCESTRAL SPECIES	56	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.u.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506.s	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
American mink	MODERN SPECIES	174	CXorf58 (ENSNVIG00000000423)	ENSNVIG00000000439	SAT1 (ENSNVIG00000000462)	ACOT9 (ENSNVIG00000000496)	PRDX4 (ENSNVIG00000000569)	ENSNVIG00000000609	PTCHD1 (ENSNVIG00000000612)	ENSNVIG00000000616	ENSNVIG00000000621	ENSNVIG00000000640	PHEX (ENSNVIG00000000645)	SMS (ENSNVIG00000000673)	MBTPS2 (ENSNVIG00000000714)	SMPX (ENSNVIG00000000732)	CNKSR2 (ENSNVIG00000000771)	RPS6KA3 (ENSNVIG00000001453) #22	EIF1AX (ENSNVIG00000001914) #23
Ferret	MODERN SPECIES	229															ENSMPUG00000003816	RPS6KA3 (ENSMPUG00000003384) #22	EIF1AX (ENSMPUG00000003337) #23	MAP7D2 (ENSMPUG00000003325) #24	BCLAF3 (ENSMPUG00000003312) #25	SH3KBP1 (ENSMPUG00000003301) #26	ENSMPUG00000003295 #27	ENSMPUG00000003281 #27	PDHA1 (ENSMPUG00000003269) #28	ADGRG2 (ENSMPUG00000003173) #29	PHKA2 (ENSMPUG00000002957) #30	PPEF1 (ENSMPUG00000002945) #32	RS1 (ENSMPUG00000002912) #33	CDKL5 (ENSMPUG00000002901) #34	ENSMPUG00000002898	ENSMPUG00000002872	SCML2 (ENSMPUG00000002862) #35
Canidae	ANCESTRAL SPECIES	26	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.z	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506.r.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT01090000260070.A	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d
Canis_lupus	ANCESTRAL SPECIES	26	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.y.a.b.a	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506.r.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT01090000260070.A	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d
Dog	MODERN SPECIES	144	EIF2S3 (ENSCAFG00845030382)	KLHL15 (ENSCAFG00845030357)	CXorf58 (ENSCAFG00845030319)	APOO (ENSCAFG00845030303)	SAT1 (ENSCAFG00845030292)	ACOT9 (ENSCAFG00845030245)	PRDX4 (ENSCAFG00845030129)	PTCHD1 (ENSCAFG00845030096)	ENSCAFG00845030087	PHEX (ENSCAFG00845029993)	ENSCAFG00845029922	MBTPS2 (ENSCAFG00845029854)	SMPX (ENSCAFG00845029832)	KLHL34 (ENSCAFG00845029813)	CNKSR2 (ENSCAFG00845029599)	RPS6KA3 (ENSCAFG00845029219) #22	EIF1AX (ENSCAFG00845029014) #23	MAP7D2 (ENSCAFG00845028966) #24	BCLAF3 (ENSCAFG00845028801) #25	SH3KBP1 (ENSCAFG00845028384) #26	MAP3K15 (ENSCAFG00845028166) #27	PDHA1 (ENSCAFG00845028035) #28	ENSCAFG00845028004	ADGRG2 (ENSCAFG00845027443) #29	PHKA2 (ENSCAFG00845026195) #30	PPEF1 (ENSCAFG00845025770) #32	RS1 (ENSCAFG00845025646) #33	ENSCAFG00845025606	CDKL5 (ENSCAFG00845025238) #34	ENSCAFG00845025153	SCML2 (ENSCAFG00845024846) #35
Dingo	MODERN SPECIES	217	EIF2S3B (ENSCAFG00020005385)	KLHL15 (ENSCAFG00020005384)	CXorf58 (ENSCAFG00020005375)	SAT1 (ENSCAFG00020005373)	ACOT9 (ENSCAFG00020005354)	PRDX4 (ENSCAFG00020005348)	PTCHD1 (ENSCAFG00020005326)	ENSCAFG00020005312	ENSCAFG00020005279	PHEX (ENSCAFG00020005217)	ENSCAFG00020005174	MBTPS2 (ENSCAFG00020005119)	SMPX (ENSCAFG00020005104)	CNKSR2 (ENSCAFG00020004670)	ENSCAFG00020004620	RPS6KA3 (ENSCAFG00020004599) #22	EIF1AX (ENSCAFG00020004588) #23	MAP7D2 (ENSCAFG00020004579) #24	ENSCAFG00020004575 #25	SH3KBP1 (ENSCAFG00020004559) #26	MAP3K15 (ENSCAFG00020004533) #27	PDHA1 (ENSCAFG00020004526) #28	ADGRG2 (ENSCAFG00020004286) #29	PHKA2 (ENSCAFG00020004228) #30	PPEF1 (ENSCAFG00020004211) #32	RS1 (ENSCAFG00020004187) #33	ENSCAFG00020004181	CDKL5 (ENSCAFG00020004060) #34	SCML2 (ENSCAFG00020004011) #35	RAI2 (ENSCAFG00020004001)	NHS (ENSCAFG00020003950)
Red fox	MODERN SPECIES	24	CXorf58 (ENSVVUG00000012739)	ENSVVUG00000012745	SAT1 (ENSVVUG00000012751)	ACOT9 (ENSVVUG00000012758)	PRDX4 (ENSVVUG00000012770)	PTCHD1 (ENSVVUG00000012785)	ENSVVUG00000012789	PHEX (ENSVVUG00000012831)	ENSVVUG00000012939	MBTPS2 (ENSVVUG00000012954)	SMPX (ENSVVUG00000012956)	ENSVVUG00000012959	CNKSR2 (ENSVVUG00000012970)	ENSVVUG00000012984	ENSVVUG00000012987	RPS6KA3 (ENSVVUG00000013013) #22	EIF1AX (ENSVVUG00000013024) #23	MAP7D2 (ENSVVUG00000013035) #24	BCLAF3 (ENSVVUG00000013082) #25	SH3KBP1 (ENSVVUG00000013144) #26	ENSVVUG00000013205	ENSVVUG00000013215	MAP3K15 (ENSVVUG00000013244) #27	PDHA1 (ENSVVUG00000013392) #28	ADGRG2 (ENSVVUG00000013420) #29	PPEF1 (ENSVVUG00000014157) #32	ENSVVUG00000014199	CDKL5 (ENSVVUG00000014210) #34	ENSVVUG00000014243	ENSVVUG00000014245	SCML2 (ENSVVUG00000014250) #35
Felidae	ANCESTRAL SPECIES	12	ENSGT00940000153430.a.a	ENSGT00940000165217	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000153680.a	ENSGT00390000018687	ENSGT00990000213085	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT01030000235848	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Panthera	ANCESTRAL SPECIES	41															ENSGT01030000235848	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT01090000260070.A	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00950000182963.b.a
Panthera_a	ANCESTRAL SPECIES	40																ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000158222.ib.b	ENSGT00390000009320.cb	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d
leopard	MODERN SPECIES	139															ENSPPRG00000008049	RPS6KA3 (ENSPPRG00000008105) #22	ENSPPRG00000008180 #23	MAP7D2 (ENSPPRG00000008395) #24	BCLAF3 (ENSPPRG00000008464) #25	SH3KBP1 (ENSPPRG00000008569) #26	MAP3K15 (ENSPPRG00000008639) #27	PDHA1 (ENSPPRG00000008782) #28	ENSPPRG00000008810	ADGRG2 (ENSPPRG00000010256) #29	PHKA2 (ENSPPRG00000010549) #30	PPEF1 (ENSPPRG00000010688) #32	RS1 (ENSPPRG00000010703) #33	CDKL5 (ENSPPRG00000010754) #34	ENSPPRG00000010762 #35	ENSPPRG00000010766 #35
lion	MODERN SPECIES	88	CXorf38 (ENSPLOG00000021911)	MPC1L (ENSPLOG00000021900)	ATP6AP2 (ENSPLOG00000021715)	ENSPLOG00000021686	ENSPLOG00000021673	BCOR (ENSPLOG00000021643)	MID1IP1 (ENSPLOG00000021611)	TSPAN7 (ENSPLOG00000021583)	OTC (ENSPLOG00000021548)	ENSPLOG00000021386	SYTL5 (ENSPLOG00000021282)	ENSPLOG00000021262	ENSPLOG00000021250	DYNLT3 (ENSPLOG00000021233)	CYBB (ENSPLOG00000021184)	RPS6KA3 (ENSPLOG00000021031) #22	EIF1AX (ENSPLOG00000020933) #23	MAP7D2 (ENSPLOG00000020581) #24	BCLAF3 (ENSPLOG00000020503) #25	SH3KBP1 (ENSPLOG00000020327) #26	MAP3K15 (ENSPLOG00000020043) #27	PDHA1 (ENSPLOG00000019955) #28	ENSPLOG00000019908	ENSPLOG00000019887	ADGRG2 (ENSPLOG00000017564) #29	PHKA2 (ENSPLOG00000016957) #30	PPEF1 (ENSPLOG00000016638) #32	RS1 (ENSPLOG00000016497) #33	ENSPLOG00000016465	CDKL5 (ENSPLOG00000016436) #34	SCML2 (ENSPLOG00000016350) #35
Tiger	MODERN SPECIES	323															ENSPTIG00000015099	RPS6KA3 (ENSPTIG00000013422) #22	ENSPTIG00000012582 #23	MAP7D2 (ENSPTIG00000009089) #24	BCLAF3 (ENSPTIG00000006480) #25	MAP3K15 (ENSPTIG00000021189) #27	PDHA1 (ENSPTIG00000019524) #28	ADGRG2 (ENSPTIG00000007761) #29	PHKA2 (ENSPTIG00000004654) #30	PPEF1 (ENSPTIG00000020149) #32	RS1 (ENSPTIG00000019847) #33	CDKL5 (ENSPTIG00000018564) #34	ENSPTIG00000017604 #35
Cat	MODERN SPECIES	252	PRDX4 (ENSFCAG00000004028)	ENSFCAG00000033776	ENSFCAG00000032644	ENSFCAG00000034636	PTCHD1 (ENSFCAG00000031503)	ENSFCAG00000049112	ENSFCAG00000038497	ENSFCAG00000051651	PHEX (ENSFCAG00000023221)	SMS (ENSFCAG00000002434)	MBTPS2 (ENSFCAG00000029861)	SMPX (ENSFCAG00000037718)	CNKSR2 (ENSFCAG00000026807)	ENSFCAG00000049761	ENSFCAG00000053775	RPS6KA3 (ENSFCAG00000010795) #22	EIF1AX (ENSFCAG00000035249) #23	MAP7D2 (ENSFCAG00000010791) #24	BCLAF3 (ENSFCAG00000003909) #25	SH3KBP1 (ENSFCAG00000003908) #26	MAP3K15 (ENSFCAG00000012906) #27	PDHA1 (ENSFCAG00000012903) #28	ENSFCAG00000006395	ADGRG2 (ENSFCAG00000018328) #29	PHKA2 (ENSFCAG00000001529) #30	PPEF1 (ENSFCAG00000001528) #32	RS1 (ENSFCAG00000037717) #33	ENSFCAG00000026145	CDKL5 (ENSFCAG00000001075) #34	SCML2 (ENSFCAG00000006438) #35	ENSFCAG00000053338
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Equus	ANCESTRAL SPECIES	48	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000167584.b	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT01090000261388	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d
Horse	MODERN SPECIES	480	SAT1 (ENSECAG00000021968)	APOO (ENSECAG00000013441)	ACOT9 (ENSECAG00000019023)	PRDX4 (ENSECAG00000010085)	PTCHD1 (ENSECAG00000009607)	DDX53 (ENSECAG00000043882)	PHEX (ENSECAG00000011455)	SMS (ENSECAG00000017447)	MBTPS2 (ENSECAG00000000437)	SMPX (ENSECAG00000058470)	KLHL34 (ENSECAG00000018669)	ENSECAG00000044474	CNKSR2 (ENSECAG00000000149)	ENSECAG00000049869	ENSECAG00000047809	RPS6KA3 (ENSECAG00000011322) #22	EIF1AX (ENSECAG00000006469) #23	MAP7D2 (ENSECAG00000000072) #24	BCLAF3 (ENSECAG00000024666)	SH3KBP1 (ENSECAG00000017758) #26	MAP3K15 (ENSECAG00000022251) #27	PDHA1 (ENSECAG00000001964) #28	ADGRG2 (ENSECAG00000023252) #29	PHKA2 (ENSECAG00000004868) #30	PPEF1 (ENSECAG00000013892) #32	RS1 (ENSECAG00000012117) #33	CDKL5 (ENSECAG00000007008) #34	SCML2 (ENSECAG00000022025) #35	ENSECAG00000033783	RAI2 (ENSECAG00000006060)	ENSECAG00000030878
Donkey	MODERN SPECIES	36	ENSEASG00005017768	CXorf58 (ENSEASG00005004770)	APOO (ENSEASG00005004773)	SAT1 (ENSEASG00005026493)	ACOT9 (ENSEASG00005004784)	PRDX4 (ENSEASG00005004804)	PTCHD1 (ENSEASG00005032723)	ENSEASG00005034757	ENSEASG00005037356	PHEX (ENSEASG00005023744)	SMS (ENSEASG00005020046)	ENSEASG00005020041	SMPX (ENSEASG00005007668)	KLHL34 (ENSEASG00005037044)	CNKSR2 (ENSEASG00005007178)	RPS6KA3 (ENSEASG00005014705) #22	EIF1AX (ENSEASG00005009834) #23	MAP7D2 (ENSEASG00005014697) #24	ENSEASG00005014696 #25	ENSEASG00005034136	ENSEASG00005035168	SH3KBP1 (ENSEASG00005014314) #26	MAP3K15 (ENSEASG00005014304) #27	PDHA1 (ENSEASG00005014303) #28	ADGRG2 (ENSEASG00005014281) #29	ENSEASG00005025600 #30	PPEF1 (ENSEASG00005022499) #32	RS1 (ENSEASG00005022504) #33	CDKL5 (ENSEASG00005022515) #34	SCML2 (ENSEASG00005022494) #35	ENSEASG00005027646
Chiroptera	ANCESTRAL SPECIES	25	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Microchiroptera	ANCESTRAL SPECIES	25	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010003192	PRDX4 (ENSRFEG00010003215)	PTCHD1 (ENSRFEG00010003276)	ENSRFEG00010003295	ENSRFEG00010003306	ENSRFEG00010007348	ENSRFEG00010007428	PHEX (ENSRFEG00010007442)	ENSRFEG00010007656	MBTPS2 (ENSRFEG00010007702)	ENSRFEG00010007751	SMPX (ENSRFEG00010007815)	KLHL34 (ENSRFEG00010007846)	CNKSR2 (ENSRFEG00010007889)	ENSRFEG00010008206	RPS6KA3 (ENSRFEG00010008249) #22	EIF1AX (ENSRFEG00010008355) #23	MAP7D2 (ENSRFEG00010008522) #24	BCLAF3 (ENSRFEG00010008652) #25	SH3KBP1 (ENSRFEG00010008770) #26	MAP3K15 (ENSRFEG00010009034) #27	PDHA1 (ENSRFEG00010009265) #28	ADGRG2 (ENSRFEG00010009414) #29	PHKA2 (ENSRFEG00010009773) #30	PPEF1 (ENSRFEG00010009902) #32	RS1 (ENSRFEG00010010035) #33	CDKL5 (ENSRFEG00010010106) #34	SCML2 (ENSRFEG00010010166) #35	ENSRFEG00010010207	RAI2 (ENSRFEG00010010245)	ENSRFEG00010010269
Microbat	MODERN SPECIES	986																RPS6KA3 (ENSMLUG00000012980) #22	ENSMLUG00000012977 #23	MAP7D2 (ENSMLUG00000012967) #24	BCLAF3 (ENSMLUG00000012956) #25	SH3KBP1 (ENSMLUG00000012949) #26	ENSMLUG00000025007	MAP3K15 (ENSMLUG00000012936) #27	PDHA1 (ENSMLUG00000012932) #28	ENSMLUG00000011884	ENSMLUG00000030082	ADGRG2 (ENSMLUG00000005218) #29	SCARB1 (ENSMLUG00000002680)	PHKA2 (ENSMLUG00000015264) #30	PPEF1 (ENSMLUG00000005487) #32	RS1 (ENSMLUG00000006836) #33	CDKL5 (ENSMLUG00000006808) #34
Megabat	MODERN SPECIES	2757																RPS6KA3 (ENSPVAG00000003522) #22	EIF1AX (ENSPVAG00000003521) #23	MAP7D2 (ENSPVAG00000003519) #24
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Suina	ANCESTRAL SPECIES	41	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00950000185291	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Chacoan peccary	MODERN SPECIES	109																RPS6KA3 (ENSCWAG00000003548) #22	EIF1AX (ENSCWAG00000003625) #23	MAP7D2 (ENSCWAG00000003689) #24	BCLAF3 (ENSCWAG00000003903) #25	SH3KBP1 (ENSCWAG00000004005) #26	MAP3K15 (ENSCWAG00000004160) #27	PDHA1 (ENSCWAG00000004308) #28	ENSCWAG00000004397	ADGRG2 (ENSCWAG00000004734) #29	PHKA2 (ENSCWAG00000011981) #30	PPEF1 (ENSCWAG00000012062) #32	RS1 (ENSCWAG00000012171) #33	CDKL5 (ENSCWAG00000012250) #34	SCML2 (ENSCWAG00000012506) #35	RAI2 (ENSCWAG00000012729)	NHS (ENSCWAG00000012785)
Pig	MODERN SPECIES	300	ENSSSCG00000012175	APOO (ENSSSCG00000012174)	SAT1 (ENSSSCG00000012173)	ACOT9 (ENSSSCG00000012172)	PRDX4 (ENSSSCG00000012171)	ENSSSCG00000045320	PTCHD1 (ENSSSCG00000032433)	ENSSSCG00000012169	PHEX (ENSSSCG00000012167)	SMS (ENSSSCG00000012166)	ENSSSCG00000012165	SMPX (ENSSSCG00000032720)	KLHL34 (ENSSSCG00000033979)	CNKSR2 (ENSSSCG00000012164)	ENSSSCG00000060065	RPS6KA3 (ENSSSCG00000012163) #22	EIF1AX (ENSSSCG00000032223) #23	MAP7D2 (ENSSSCG00000012161) #24	BCLAF3 (ENSSSCG00000023334) #25	SH3KBP1 (ENSSSCG00000012160) #26	MAP3K15 (ENSSSCG00000020735) #27	PDHA1 (ENSSSCG00000023643) #28	ENSSSCG00000040104	ADGRG2 (ENSSSCG00000029756) #29	PHKA2 (ENSSSCG00000012157) #30	PPEF1 (ENSSSCG00000030274) #32	RS1 (ENSSSCG00000026932) #33	CDKL5 (ENSSSCG00000012156) #34	SCML2 (ENSSSCG00000012155) #35	ENSSSCG00000041054	ENSSSCG00000050671
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Camelidae	ANCESTRAL SPECIES	59	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00510000047522	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164589
Arabian camel	MODERN SPECIES	204	ENSCDRG00005021662	ENSCDRG00005021660	SAT1 (ENSCDRG00005021657)	ACOT9 (ENSCDRG00005021651)	PRDX4 (ENSCDRG00005021642)	ENSCDRG00005021636	PTCHD1 (ENSCDRG00005021635)	ENSCDRG00005021631	PHEX (ENSCDRG00005021620)	SMS (ENSCDRG00005021617)	MBTPS2 (ENSCDRG00005021615)	ENSCDRG00005021614	SMPX (ENSCDRG00005021613)	KLHL34 (ENSCDRG00005021612)	CNKSR2 (ENSCDRG00005021599)	RPS6KA3 (ENSCDRG00005021577) #22	EIF1AX (ENSCDRG00005021559) #23	MAP7D2 (ENSCDRG00005021545) #24	BCLAF3 (ENSCDRG00005021538) #25	SH3KBP1 (ENSCDRG00005021507) #26	PDHA1 (ENSCDRG00005021482) #28	ADGRG2 (ENSCDRG00005016282) #29	PHKA2 (ENSCDRG00005015770) #30	PPEF1 (ENSCDRG00005015683) #32	RS1 (ENSCDRG00005015612) #33	ENSCDRG00005015576	CDKL5 (ENSCDRG00005015479) #34	SCML2 (ENSCDRG00005015356) #35	RAI2 (ENSCDRG00005015229)	SCML1 (ENSCDRG00005015136)	NHS (ENSCDRG00005014939)
Alpaca	MODERN SPECIES	2067																RPS6KA3 (ENSVPAG00000009929) #22	EIF1AX (ENSVPAG00000009927) #23
Artiodactyla_b	ANCESTRAL SPECIES	24	ENSGT00550000074801.g.b.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Cetacea	ANCESTRAL SPECIES	21	ENSGT00940000159116	ENSGT00510000048637	ENSGT00950000183087.A.a.a.b.o.a	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.r	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00390000009724.l.y.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT01010000222890.b	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b	ENSGT00940000159407 #35	ENSGT00940000154164.d
Odontoceti	ANCESTRAL SPECIES	22	ENSGT00950000183087.A.a.a.b.o.a	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.r	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164207	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00390000009724.l.y.b	ENSGT00390000009113.a.a.k.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT01010000222890.b	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b	ENSGT00940000159407 #35	ENSGT00940000154164.d
Sperm whale	MODERN SPECIES	13	SAT1 (ENSPCTG00005015519)	ACOT9 (ENSPCTG00005015365)	PRDX4 (ENSPCTG00005015287)	PTCHD1 (ENSPCTG00005015207)	ENSPCTG00005015143	ENSPCTG00005014773	ENSPCTG00005014734	PHEX (ENSPCTG00005014479)	SMS (ENSPCTG00005014394)	ENSPCTG00005014208	SMPX (ENSPCTG00005014144)	KLHL34 (ENSPCTG00005014125)	CNKSR2 (ENSPCTG00005013662)	ENSPCTG00005013591	ENSPCTG00005013565	RPS6KA3 (ENSPCTG00005013127) #22	EIF1AX (ENSPCTG00005012927) #23	MAP7D2 (ENSPCTG00005012303) #24	BCLAF3 (ENSPCTG00005012120) #25	SH3KBP1 (ENSPCTG00005011856) #26	PDHA1 (ENSPCTG00005011695) #28	ADGRG2 (ENSPCTG00005006920) #29	PHKA2 (ENSPCTG00005006139) #30	PPEF1 (ENSPCTG00005005905) #32	RS1 (ENSPCTG00005005843) #33	CDKL5 (ENSPCTG00005005814) #34	ENSPCTG00005005791	SCML2 (ENSPCTG00005005727) #35	ENSPCTG00005005614	ENSPCTG00005005600	SCML1 (ENSPCTG00005005559)
Odontoceti_a	ANCESTRAL SPECIES	20	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.r	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000164207	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00390000009724.l.y.b	ENSGT00390000009113.a.a.k.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT01010000222890.b	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b	ENSGT00940000159407.m #35	ENSGT00940000154164.d
Dolphin	MODERN SPECIES	930																RPS6KA3 (ENSTTRG00000002015) #22	EIF1AX (ENSTTRG00000002012) #23	MAP7D2 (ENSTTRG00000002011) #24	BCLAF3 (ENSTTRG00000002010) #25	SH3KBP1 (ENSTTRG00000002009) #26
Odontoceti_b	ANCESTRAL SPECIES	22	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.r	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000159407.n #35	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000164207	ENSGT00940000157313	ENSGT00940000172088	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00390000009724.l.y.b	ENSGT00390000009113.a.a.k.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT01010000222890.b	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b	ENSGT00940000159407.m #35	ENSGT00940000154164.d
Monodontidae	ANCESTRAL SPECIES	30	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330.r	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000159951.e.b.b.b	ENSGT00940000159407.n #35	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000164207	ENSGT00940000157313	ENSGT00940000172088	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00390000009724.l.y.b	ENSGT00390000009113.a.a.k.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00390000002034.j	ENSGT01010000222890.b	ENSGT00940000160729.b	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00950000183087.A.a.a.a.b.b.a.a.a.a.b.b
Beluga whale	MODERN SPECIES	41	ENSDLEG00000003639	PRDX4 (ENSDLEG00000003633)	PTCHD1 (ENSDLEG00000003624)	ENSDLEG00000003616	ENSDLEG00000003610 #35	ENSDLEG00000003601	ENSDLEG00000003596	PHEX (ENSDLEG00000003589)	SMS (ENSDLEG00000021074)	MBTPS2 (ENSDLEG00000021061)	ENSDLEG00000021055	SMPX (ENSDLEG00000021052)	CNKSR2 (ENSDLEG00000021034)	ENSDLEG00000021028	ENSDLEG00000021027	RPS6KA3 (ENSDLEG00000021020) #22	EIF1AX (ENSDLEG00000021017) #23	MAP7D2 (ENSDLEG00000020985) #24	BCLAF3 (ENSDLEG00000020974) #25	ENSDLEG00000020972	ENSDLEG00000020970	ENSDLEG00000020966	SH3KBP1 (ENSDLEG00000020919) #26	MAP3K15 (ENSDLEG00000020876) #27	PDHA1 (ENSDLEG00000020859) #28	ADGRG2 (ENSDLEG00000020709) #29	PHKA2 (ENSDLEG00000020633) #30	PPEF1 (ENSDLEG00000020612) #32	RS1 (ENSDLEG00000020598) #33	CDKL5 (ENSDLEG00000020591) #34	ENSDLEG00000020586
Narwhal	MODERN SPECIES	309	PRDX4 (ENSMMNG00015013185)	PTCHD1 (ENSMMNG00015013178)	ENSMMNG00015013169	ENSMMNG00015013158 #35	ENSMMNG00015013143	PHEX (ENSMMNG00015013104)	ENSMMNG00015013065	ENSMMNG00015013042	MBTPS2 (ENSMMNG00015013011)	ENSMMNG00015012997	SMPX (ENSMMNG00015012992)	KLHL34 (ENSMMNG00015012985)	CNKSR2 (ENSMMNG00015012238)	ENSMMNG00015011934	ENSMMNG00015011921	RPS6KA3 (ENSMMNG00015011742) #22	ENSMMNG00015011692 #23	MAP7D2 (ENSMMNG00015011661) #24	BCLAF3 (ENSMMNG00015011642) #25	ENSMMNG00015011630	ENSMMNG00015011610	ENSMMNG00015011595	ENSMMNG00015011582	SH3KBP1 (ENSMMNG00015011427) #26	PDHA1 (ENSMMNG00015011306) #28	ADGRG2 (ENSMMNG00015011189) #29	PHKA2 (ENSMMNG00015011017) #30	PPEF1 (ENSMMNG00015010972) #32	RS1 (ENSMMNG00015010947) #33	CDKL5 (ENSMMNG00015010933) #34	ENSMMNG00015010922
Vaquita	MODERN SPECIES	34	ENSPSNG00000022466	ENSPSNG00000022464	ENSPSNG00000022459 #35	ENSPSNG00000022455	ENSPSNG00000022447	ENSPSNG00000022444	PHEX (ENSPSNG00000022431)	ENSPSNG00000022423	ENSPSNG00000022411	ENSPSNG00000022401	SMPX (ENSPSNG00000022398)	KLHL34 (ENSPSNG00000022394)	CNKSR2 (ENSPSNG00000022151)	ENSPSNG00000021866	ENSPSNG00000021849	RPS6KA3 (ENSPSNG00000021768) #22	EIF1AX (ENSPSNG00000021671) #23	MAP7D2 (ENSPSNG00000021591) #24	BCLAF3 (ENSPSNG00000021539) #25	ENSPSNG00000021512	SH3KBP1 (ENSPSNG00000021240) #26	PDHA1 (ENSPSNG00000020773) #28	ADGRG2 (ENSPSNG00000020539) #29	PHKA2 (ENSPSNG00000020358) #30	PPEF1 (ENSPSNG00000020159) #32	RS1 (ENSPSNG00000020065) #33	ENSPSNG00000020052	CDKL5 (ENSPSNG00000020000) #34	ENSPSNG00000019959	ENSPSNG00000019901 #35	RAI2 (ENSPSNG00000019870)
Blue whale	MODERN SPECIES	40	PTCHD1 (ENSBMSG00010021280)	ENSBMSG00010021269	ENSBMSG00010021262	ENSBMSG00010021259	ENSBMSG00010021247	ENSBMSG00010021244	PHEX (ENSBMSG00010021225)	ENSBMSG00010021206	ENSBMSG00010021193	SMPX (ENSBMSG00010021188)	KLHL34 (ENSBMSG00010021180)	CNKSR2 (ENSBMSG00010015971)	ENSBMSG00010015623	ENSBMSG00010015603	ENSBMSG00010015592	RPS6KA3 (ENSBMSG00010015348) #22	ENSBMSG00010015217 #23	MAP7D2 (ENSBMSG00010015124) #24	BCLAF3 (ENSBMSG00010015038) #25	ENSBMSG00010014991	SH3KBP1 (ENSBMSG00010014785) #26	MAP3K15 (ENSBMSG00010014594) #27	PDHA1 (ENSBMSG00010014498) #28	ENSBMSG00010014456	ADGRG2 (ENSBMSG00010014260) #29	PHKA2 (ENSBMSG00010014126) #30	PPEF1 (ENSBMSG00010014080) #32	RS1 (ENSBMSG00010014012) #33	ENSBMSG00010013995	ENSBMSG00010013988	CDKL5 (ENSBMSG00010013954) #34
Pecora	ANCESTRAL SPECIES	34	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Yarkand deer	MODERN SPECIES	1323	SAT1 (ENSCHYG00000022252)	ACOT9 (ENSCHYG00000022508)	PRDX4 (ENSCHYG00000022660)	PTCHD1 (ENSCHYG00000022778)	DDX53 (ENSCHYG00000022828)	ENSCHYG00000022855	PHEX (ENSCHYG00000022869)	SMS (ENSCHYG00000022994)	ENSCHYG00000023111	MBTPS2 (ENSCHYG00000023135)	SMPX (ENSCHYG00000023180)	KLHL34 (ENSCHYG00000023198)	CNKSR2 (ENSCHYG00000023268)	ENSCHYG00000023829	ENSCHYG00000023852	RPS6KA3 (ENSCHYG00000023911) #22	EIF1AX (ENSCHYG00000024205) #23	ENSCHYG00000024281	MAP7D2 (ENSCHYG00000024324) #24	BCLAF3 (ENSCHYG00000024575) #25	SH3KBP1 (ENSCHYG00000024812) #26	MAP3K15 (ENSCHYG00000025350) #27	ENSCHYG00000025460	ENSCHYG00000025479 #28	ADGRG2 (ENSCHYG00000025589) #29	PHKA2 (ENSCHYG00000014501) #30	ENSCHYG00000015895	ENSCHYG00000015917	PPEF1 (ENSCHYG00000016044) #32	RS1 (ENSCHYG00000016355) #33	CDKL5 (ENSCHYG00000016442) #34
Percora_a	ANCESTRAL SPECIES	22	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000160347.a	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165
Siberian musk deer	MODERN SPECIES	39									SMS (ENSMMSG00000006339)	ENSMMSG00000006372	SMPX (ENSMMSG00000006404)	KLHL34 (ENSMMSG00000006431)	CNKSR2 (ENSMMSG00000006728)	ENSMMSG00000013799	ENSMMSG00000013809	RPS6KA3 (ENSMMSG00000013842) #22	ENSMMSG00000013961 #23	MAP7D2 (ENSMMSG00000014040) #24	BCLAF3 (ENSMMSG00000014667) #25	SH3KBP1 (ENSMMSG00000014761) #26	ENSMMSG00000014880	ENSMMSG00000014890	MAP3K15 (ENSMMSG00000014913) #27	ENSMMSG00000015007	ENSMMSG00000015019	PDHA1 (ENSMMSG00000015042) #28	ENSMMSG00000015071	ADGRG2 (ENSMMSG00000015124) #29	PHKA2 (ENSMMSG00000015473) #30	PPEF1 (ENSMMSG00000015507) #32	RS1 (ENSMMSG00000015564) #33
Bovidae	ANCESTRAL SPECIES	23	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000160347.a	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d	ENSGT00940000164165
Caprinae	ANCESTRAL SPECIES	46	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i.u.b #28	ENSGT00940000160347.a	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a.r #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000154164.d	ENSGT00940000164165	ENSGT00950000182963.b.a
Goat	MODERN SPECIES	29	APOO (ENSCHIG00000012782)	SAT1 (ENSCHIG00000016851)	ACOT9 (ENSCHIG00000023923)	PRDX4 (ENSCHIG00000022629)	PTCHD1 (ENSCHIG00000005349)	ENSCHIG00000020582	PHEX (ENSCHIG00000007176)	SMS (ENSCHIG00000007086)	MBTPS2 (ENSCHIG00000023780)	SMPX (ENSCHIG00000017409)	ENSCHIG00000007896	KLHL34 (ENSCHIG00000019743)	CNKSR2 (ENSCHIG00000017548)	ENSCHIG00000012004	ENSCHIG00000019442	RPS6KA3 (ENSCHIG00000022418) #22	ENSCHIG00000021471 #23	MAP7D2 (ENSCHIG00000007458) #24	BCLAF3 (ENSCHIG00000025713) #25	ENSCHIG00000002946 #26	TLR8 (ENSCHIG00000016625)	TLR7 (ENSCHIG00000021012)	PRPS2 (ENSCHIG00000006680)	ENSCHIG00000019669	ENSCHIG00000016862	ADGRG2 (ENSCHIG00000012482) #29	ENSCHIG00000012595	PPEF1 (ENSCHIG00000017281) #32	RS1 (ENSCHIG00000022783) #33	CDKL5 (ENSCHIG00000010574) #34	ENSCHIG00000023671
Rambouillet Sheep	MODERN SPECIES	205	PRDX4 (ENSOARG00020022836)	PTCHD1 (ENSOARG00020022806)	ENSOARG00020022764	PHEX (ENSOARG00020022712)	ENSOARG00020022678	MBTPS2 (ENSOARG00020022610)	SMPX (ENSOARG00020022580)	KLHL34 (ENSOARG00020022568)	CNKSR2 (ENSOARG00020016850)	ENSOARG00020016730	ENSOARG00020016721	ENSOARG00020016703	ENSOARG00020016684	ENSOARG00020016661	ENSOARG00020016638	RPS6KA3 (ENSOARG00020016195) #22	EIF1AX (ENSOARG00020015967) #23	MAP7D2 (ENSOARG00020014919) #24	ENSOARG00020014649	SH3KBP1 (ENSOARG00020014389) #26	MAP3K15 (ENSOARG00020014315) #27	PDHA1 (ENSOARG00020014126) #28	ENSOARG00020014052	ADGRG2 (ENSOARG00020013283) #29	PHKA2 (ENSOARG00020012486) #30	ENSOARG00020012454	RS1 (ENSOARG00020012237) #33	CDKL5 (ENSOARG00020012130) #34	RAI2 (ENSOARG00020011877)	NHS (ENSOARG00020011266)	REPS2 (ENSOARG00020010562)
Bovinae	ANCESTRAL SPECIES	32	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00950000185346	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000167584	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000160347.a.d.a.b	ENSGT00940000160347.a.c	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d
Bos	ANCESTRAL SPECIES	32	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00950000185346	ENSGT00940000154451.l.b.b.a.a.b	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000167584	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00390000009113.a.a.l	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000160347.a.d.a.b	ENSGT00940000160347.a.c	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000154164.d
Bos_b	ANCESTRAL SPECIES	39	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00950000185346	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000167584	ENSGT00940000154451.l.b.b.a.a.b	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00390000009113.a.a.l	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000160347.a.d.a.b	ENSGT00940000160347.a.d.a.a.a	ENSGT00940000160347.a.c	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35
Hybrid Bos Indicus	MODERN SPECIES	315	PRDX4 (ENSBIXG00005023849)	PTCHD1 (ENSBIXG00005023943)	ENSBIXG00005024020	ENSBIXG00005024079	ENSBIXG00005024121	PHEX (ENSBIXG00005024241)	SMS (ENSBIXG00005024286)	ENSBIXG00005024303	MBTPS2 (ENSBIXG00005024353)	SMPX (ENSBIXG00005024419)	CNKSR2 (ENSBIXG00005024732)	ENSBIXG00005024836	ENSBIXG00005024880	ENSBIXG00005024903	ENSBIXG00005024937	RPS6KA3 (ENSBIXG00005025516) #22	EIF1AX (ENSBIXG00005025615) #23	MAP7D2 (ENSBIXG00005025740) #24	BCLAF3 (ENSBIXG00005025827) #25	ENSBIXG00005025849	SH3KBP1 (ENSBIXG00005026195) #26	MAP3K15 (ENSBIXG00005004522) #27	ENSBIXG00005026498 #28	ENSBIXG00005005571	ENSBIXG00005026535	ENSBIXG00005026541	ADGRG2 (ENSBIXG00005026817) #29	PHKA2 (ENSBIXG00005027106) #30	PPEF1 (ENSBIXG00005004677) #32	RS1 (ENSBIXG00005005321) #33	CDKL5 (ENSBIXG00005005323) #34
Cow	MODERN SPECIES	177	SAT1 (ENSBTAG00000017363)	ACOT9 (ENSBTAG00000011258)	PRDX4 (ENSBTAG00000006165)	PTCHD1 (ENSBTAG00000020987)	ENSBTAG00000046635	ENSBTAG00000049480	PHEX (ENSBTAG00000000419)	ENSBTAG00000052700	SMS (ENSBTAG00000018382)	MBTPS2 (ENSBTAG00000008183)	SMPX (ENSBTAG00000015204)	CNKSR2 (ENSBTAG00000044202)	ENSBTAG00000013625	ENSBTAG00000050929	ENSBTAG00000047699	RPS6KA3 (ENSBTAG00000017639) #22	EIF1AX (ENSBTAG00000017633) #23	MAP7D2 (ENSBTAG00000017628) #24	BCLAF3 (ENSBTAG00000021962) #25	SH3KBP1 (ENSBTAG00000003727) #26	MAP3K15 (ENSBTAG00000019855) #27	PDHA1 (ENSBTAG00000019852) #28	ENSBTAG00000051616	ENSBTAG00000037550	MGC134232 (ENSBTAG00000038660)	ADGRG2 (ENSBTAG00000000576) #29	PHKA2 (ENSBTAG00000015355) #30	PPEF1 (ENSBTAG00000009545) #32	RS1 (ENSBTAG00000031145) #33	CDKL5 (ENSBTAG00000007428) #34	SCML2 (ENSBTAG00000009420) #35
Bos_a	ANCESTRAL SPECIES	63	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00950000185346	ENSGT00940000157313	ENSGT00870000136506	ENSGT00940000167584	ENSGT00940000154451.l.b.b.a.a.b	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000156832.p.b	ENSGT00390000009113.a.a.l	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000160347.a.d.a.b
Domestic yak	MODERN SPECIES	69	PTCHD1 (ENSBGRG00000008455)	ENSBGRG00000008530	ENSBGRG00000008641	PHEX (ENSBGRG00000008681)	ENSBGRG00000008903	ENSBGRG00000008920	SMS (ENSBGRG00000008940)	ENSBGRG00000009009	MBTPS2 (ENSBGRG00000009064)	ENSBGRG00000009234	SMPX (ENSBGRG00000009309)	KLHL34 (ENSBGRG00000009352)	CNKSR2 (ENSBGRG00000009403)	ENSBGRG00000009908	ENSBGRG00000009948	RPS6KA3 (ENSBGRG00000010065) #22	ENSBGRG00000010670 #23	MAP7D2 (ENSBGRG00000011015) #24	BCLAF3 (ENSBGRG00000011387) #25	SH3KBP1 (ENSBGRG00000011750) #26	ENSBGRG00000012957 #27	ENSBGRG00000013897 #27	PDHA1 (ENSBGRG00000014128) #28	ENSBGRG00000014583	ENSBGRG00000014610	ENSBGRG00000014636
Wild yak	MODERN SPECIES	932			PTCHD1 (ENSBMUG00000018851)	ENSBMUG00000018827	ENSBMUG00000018805	ENSBMUG00000018792	PHEX (ENSBMUG00000018766)	SMS (ENSBMUG00000018739)	ENSBMUG00000018702	SMPX (ENSBMUG00000018671)	CNKSR2 (ENSBMUG00000017867)	ENSBMUG00000017291	ENSBMUG00000017283	ENSBMUG00000017276	ENSBMUG00000017267	RPS6KA3 (ENSBMUG00000017229) #22	EIF1AX (ENSBMUG00000017161) #23	MAP7D2 (ENSBMUG00000017083) #24	BCLAF3 (ENSBMUG00000016986) #25	SH3KBP1 (ENSBMUG00000016923) #26	MAP3K15 (ENSBMUG00000016858) #27	PDHA1 (ENSBMUG00000016808) #28
American bison	DUPLICATION
American bison	MODERN SPECIES	2470																ENSBBBG00000005114 #22	ENSBBBG00000019381
American bison	MODERN SPECIES	1992																ENSBBBG00000018022 #22
Atlantogenata	ANCESTRAL SPECIES	50	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Xenarthra	ANCESTRAL SPECIES	165										ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35
Armadillo	MODERN SPECIES	729	ENSDNOG00000045460	ZNF793 (ENSDNOG00000002626)	ENSDNOG00000038073	ZNF383 (ENSDNOG00000044355)	ZNF875 (ENSDNOG00000033077)	ENSDNOG00000040925	ENSDNOG00000032914	ENSDNOG00000041572	PHEX (ENSDNOG00000002993)	SMS (ENSDNOG00000006712)	MBTPS2 (ENSDNOG00000033022)	SMPX (ENSDNOG00000016757)	KLHL34 (ENSDNOG00000033922)	CNKSR2 (ENSDNOG00000000614)	ENSDNOG00000031647	RPS6KA3 (ENSDNOG00000003310) #22	EIF1AX (ENSDNOG00000045675) #23	MAP7D2 (ENSDNOG00000017855) #24	BCLAF3 (ENSDNOG00000045492) #25	SH3KBP1 (ENSDNOG00000016477) #26	MAP3K15 (ENSDNOG00000007828) #27	PDHA1 (ENSDNOG00000008462) #28	ADGRG2 (ENSDNOG00000012455) #29	PHKA2 (ENSDNOG00000012404) #30	PPEF1 (ENSDNOG00000031966) #32	RS1 (ENSDNOG00000002498) #33	ENSDNOG00000041458	CDKL5 (ENSDNOG00000002494) #34	SCML2 (ENSDNOG00000002390) #35
Afrotheria	ANCESTRAL SPECIES	66	ENSGT00940000158684	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Afrotheria_a	ANCESTRAL SPECIES	64	ENSGT00940000158684	ENSGT00550000074801.g.b	ENSGT00940000159116	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000164183	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.i #28	ENSGT00940000156341 #29	ENSGT00950000183118.A.c.a #30	ENSGT00940000159830 #32	ENSGT00940000161181 #33	ENSGT00940000157355 #34	ENSGT00940000159407 #35	ENSGT00940000163807	ENSGT00940000154164.d	ENSGT00940000164165
Hyrax	MODERN SPECIES	5682																RPS6KA3 (ENSPCAG00000009212) #22	EIF1AX (ENSPCAG00000009150) #23	MAP7D2 (ENSPCAG00000009074) #24	BCLAF3 (ENSPCAG00000009021) #25
Elephant	MODERN SPECIES	369	EIF2S3B (ENSLAFG00000011052)	KLHL15 (ENSLAFG00000011049)	APOO (ENSLAFG00000029070)	SAT1 (ENSLAFG00000003153)	ACOT9 (ENSLAFG00000003152)	PRDX4 (ENSLAFG00000002686)	PTCHD1 (ENSLAFG00000022742)	ENSLAFG00000011531	ENSLAFG00000010569	PHEX (ENSLAFG00000010566)	SMS (ENSLAFG00000003543)	MBTPS2 (ENSLAFG00000017242)	SMPX (ENSLAFG00000001873)	KLHL34 (ENSLAFG00000007404)	CNKSR2 (ENSLAFG00000007401)	RPS6KA3 (ENSLAFG00000007020) #22	EIF1AX (ENSLAFG00000007016) #23	MAP7D2 (ENSLAFG00000023306) #24	BCLAF3 (ENSLAFG00000008518) #25	SH3KBP1 (ENSLAFG00000009756) #26	MAP3K15 (ENSLAFG00000009429) #27	PDHA1 (ENSLAFG00000009426) #28	ENSLAFG00000026076	ADGRG2 (ENSLAFG00000009428) #29	PHKA2 (ENSLAFG00000009425) #30	ENSLAFG00000009424 #32	RS1 (ENSLAFG00000009423) #33	CDKL5 (ENSLAFG00000009417) #34	ENSLAFG00000027704 #35	ENSLAFG00000011808	ENSLAFG00000011802
Tenrec	MODERN SPECIES	6704																ENSETEG00000009322 #22	ENSETEG00000009320 #23
Marsupialia	ANCESTRAL SPECIES	23	ENSGT00940000158684	ENSGT00550000074801	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.g #28
Opossum	MODERN SPECIES	3	ENSMODG00000025553	APOO (ENSMODG00000025554)	SAT1 (ENSMODG00000007747)	ACOT9 (ENSMODG00000007768)	PRDX4 (ENSMODG00000007799)	PTCHD1 (ENSMODG00000007811)	ENSMODG00000037695	ENSMODG00000050590	PHEX (ENSMODG00000007861)	ENSMODG00000007897	MBTPS2 (ENSMODG00000007926)	ENSMODG00000007934	CNKSR2 (ENSMODG00000008001)	ENSMODG00000043235	ENSMODG00000051481	RPS6KA3 (ENSMODG00000008086) #22	ENSMODG00000027820 #23	ENSMODG00000008113	MAP7D2 (ENSMODG00000008158) #24	BCLAF3 (ENSMODG00000008177) #25	ENSMODG00000008531 #26	ENSMODG00000009020 #27	ENSMODG00000009055 #28	ENSMODG00000028099	BBX (ENSMODG00000001748)	CCDC54 (ENSMODG00000025189)	ENSMODG00000041564	CBLB (ENSMODG00000001816)	ENSMODG00000043098	ALCAM (ENSMODG00000001829)	ENSMODG00000043822
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000158684	ENSGT00550000074801	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.cb	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a.f	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000162424	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.g #28	ENSGT00940000161415	ENSGT00940000158147	ENSGT00940000158272	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095
Diprotodontia	ANCESTRAL SPECIES	23	ENSGT01030000234646.B.a.b	ENSGT00940000158684	ENSGT00550000074801	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.cb	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a.f	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.g #28	ENSGT00940000161415	ENSGT00940000158147	ENSGT00940000158272	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095
Diprotodontia_a	ANCESTRAL SPECIES	24	ENSGT01030000234646.B.a.b	ENSGT00940000158684	ENSGT00550000074801	ENSGT00940000159116	ENSGT00510000048637	ENSGT00530000063666.b.cb	ENSGT00950000183121.b.b.b.b	ENSGT00390000005330	ENSGT00940000153430.a.a.f	ENSGT00940000157080	ENSGT00940000157313	ENSGT00870000136506	ENSGT00510000048066	ENSGT00390000017542	ENSGT00940000156709	ENSGT00940000159370 #22	ENSGT00390000008256 #23	ENSGT00950000182941.b.b #24	ENSGT00950000183163.b #25	ENSGT00940000155886 #26	ENSGT00940000159562 #27	ENSGT00530000063174.a.g #28	ENSGT00940000161415	ENSGT00940000158147	ENSGT00940000158272	ENSGT00950000182852.A.a.b	ENSGT00390000006574	ENSGT00390000004660.C.b	ENSGT00390000000191	ENSGT00550000074838	ENSGT00940000157095
Common wonbat	MODERN SPECIES	56							ACOT9 (ENSVURG00010011656)	ENSVURG00010011668	PTCHD1 (ENSVURG00010011688)	PHEX (ENSVURG00010011707)	SMS (ENSVURG00010011730)	MBTPS2 (ENSVURG00010011746)	SMPX (ENSVURG00010011755)	ENSVURG00010011764	CNKSR2 (ENSVURG00010011791)	RPS6KA3 (ENSVURG00010011816) #22	EIF1AX (ENSVURG00010011856) #23	ENSVURG00010011864 #24	BCLAF3 (ENSVURG00010011888) #25	MAP3K15 (ENSVURG00010011944) #27	ENSVURG00010011964	ENSVURG00010011973 #28	ST3GAL6 (ENSVURG00010012019)	DCBLD2 (ENSVURG00010012042)	COL8A1 (ENSVURG00010012056)	FILIP1L (ENSVURG00010012064)	CMSS1 (ENSVURG00010012075)	ENSVURG00010012099	TBC1D23 (ENSVURG00010012116)	NIT2 (ENSVURG00010012148)	TOMM70 (ENSVURG00010012184)
koala	MODERN SPECIES	36	ENSPCIG00000024018	ENSPCIG00000024017	KLHL15 (ENSPCIG00000024016)	ENSPCIG00000024014	ENSPCIG00000024012	SAT1 (ENSPCIG00000024007)	ACOT9 (ENSPCIG00000008098)	ENSPCIG00000008170	PTCHD1 (ENSPCIG00000008175)	ENSPCIG00000011702	PHEX (ENSPCIG00000011706)	SMS (ENSPCIG00000033142)	MBTPS2 (ENSPCIG00000011718)	ENSPCIG00000011721	CNKSR2 (ENSPCIG00000011723)	RPS6KA3 (ENSPCIG00000007618) #22	EIF1AX (ENSPCIG00000007615) #23	MAP7D2 (ENSPCIG00000007534) #24	BCLAF3 (ENSPCIG00000007517) #25	SH3KBP1 (ENSPCIG00000029212) #26	MAP3K15 (ENSPCIG00000009152) #27	ENSPCIG00000009157 #28	ENSPCIG00000032452
Wallaby	MODERN SPECIES	8515																ENSMEUG00000001339 #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000007159	KLHL15 (ENSSHAG00000007725)	ENSSHAG00000008334	APOO (ENSSHAG00000008734)	SAT1 (ENSSHAG00000009704)	ACOT9 (ENSSHAG00000010202)	PRDX4 (ENSSHAG00000029195)	PTCHD1 (ENSSHAG00000012338)	PHEX (ENSSHAG00000008915)	SMS (ENSSHAG00000011004)	MBTPS2 (ENSSHAG00000012034)	SMPX (ENSSHAG00000023724)	KLHL34 (ENSSHAG00000025108)	CNKSR2 (ENSSHAG00000013024)	ENSSHAG00000024113	RPS6KA3 (ENSSHAG00000010273) #22	EIF1AX (ENSSHAG00000010995) #23	BCLAF3 (ENSSHAG00000012448) #25	SH3KBP1 (ENSSHAG00000013892) #26	MAP3K15 (ENSSHAG00000014925) #27	ENSSHAG00000015375 #28	ENSSHAG00000024653	ENSSHAG00000010926	ENSSHAG00000022061	COL8A1 (ENSSHAG00000012024)	FILIP1L (ENSSHAG00000011515)	ENSSHAG00000030984	CMSS1 (ENSSHAG00000009321)	ENSSHAG00000008996	TBC1D23 (ENSSHAG00000007828)	NIT2 (ENSSHAG00000007371)
Platypus	MODERN SPECIES	6	ENSOANG00000046289	ZFX (ENSOANG00000046710)	ENSOANG00000011504	KLHL15 (ENSOANG00000009137)	ENSOANG00000028526	APOO (ENSOANG00000014705)	SAT1 (ENSOANG00000011507)	ACOT9 (ENSOANG00000012276)	ENSOANG00000012275	PTCHD1 (ENSOANG00000010652)	PHEX (ENSOANG00000010653)	SMS (ENSOANG00000010654)	MBTPS2 (ENSOANG00000044594)	SMPX (ENSOANG00000038957)	CNKSR2 (ENSOANG00000010656)	RPS6KA3 (ENSOANG00000010658) #22	EIF1AX (ENSOANG00000048193) #23	MAP7D2 (ENSOANG00000004016) #24	BCLAF3 (ENSOANG00000004022) #25	SH3KBP1 (ENSOANG00000039084) #26	MAP3K15 (ENSOANG00000004027) #27	ENSOANG00000004029 #28	ADGRG2 (ENSOANG00000004030) #29	PHKA2 (ENSOANG00000004031) #30	ENSOANG00000038719	PPEF1 (ENSOANG00000004036) #32	RS1 (ENSOANG00000005828) #33	CDKL5 (ENSOANG00000004037) #34	ARSD (ENSOANG00000004038)	ENSOANG00000004040	ENSOANG00000004042