Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000160247	ENSGT00940000158038	ENSGT00390000007027	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000158038	ENSGT00390000007027	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468
Mus	ANCESTRAL SPECIES	3	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00860000135728 #24	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243
Mus_A	ANCESTRAL SPECIES	3	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.b	ENSGT01030000234531.A.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00860000135728 #24	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243
Mus_B	ANCESTRAL SPECIES	5	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.b	ENSGT01030000234531.A.b.a.a	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00860000135728 #24	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.b.a	ENSGT01030000234531.A.b.a.b	ENSGT01030000234531.A.b.b.b.e.a.a.a.b.a.a.b.a	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00860000135728 #24	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243
Steppe mouse	MODERN SPECIES	2743																Jak1 (ENSMSIG00000032175) #22	Raver2 (ENSMSIG00000032177) #23	ENSMSIG00000032179 #24	Cachd1 (ENSMSIG00000032180) #25	Ube2u (ENSMSIG00000032183) #26	ENSMSIG00000032184 #27
spretus	MODERN SPECIES	13	Mier1 (MGP_SPRETEiJ_G0027187)	Dnai4 (MGP_SPRETEiJ_G0027186)	Insl5 (MGP_SPRETEiJ_G0027185)	Dynlt5 (MGP_SPRETEiJ_G0027184)	Sgip1 (MGP_SPRETEiJ_G0027183)	Pde4b (MGP_SPRETEiJ_G0027182)	MGP_SPRETEiJ_G0027181	MGP_SPRETEiJ_G0027180	MGP_SPRETEiJ_G0027179	C130073F10Rik (MGP_SPRETEiJ_G0027178)	MGP_SPRETEiJ_G0027177	Lepr (MGP_SPRETEiJ_G0027176)	Leprot (MGP_SPRETEiJ_G0027175)	Dnajc6 (MGP_SPRETEiJ_G0027174)	Ak4 (MGP_SPRETEiJ_G0027173)	Jak1 (MGP_SPRETEiJ_G0027172) #22	Raver2 (MGP_SPRETEiJ_G0027171) #23	MGP_SPRETEiJ_G0027170 #24	Cachd1 (MGP_SPRETEiJ_G0027169) #25	Ube2u (MGP_SPRETEiJ_G0027168) #26	Ror1 (MGP_SPRETEiJ_G0027167) #27	Pgm1 (MGP_SPRETEiJ_G0027166)	Efcab7 (MGP_SPRETEiJ_G0027165)	Itgb3bp (MGP_SPRETEiJ_G0027164)	Alg6 (MGP_SPRETEiJ_G0027163)	Foxd3 (MGP_SPRETEiJ_G0027162)	MGP_SPRETEiJ_G0027160	Atg4c (MGP_SPRETEiJ_G0027159)	Angptl3 (MGP_SPRETEiJ_G0027158)	Dock7 (MGP_SPRETEiJ_G0027157)	MGP_SPRETEiJ_G0027156
Mouse	MODERN SPECIES	13	Dnai4 (ENSMUSG00000035126)	Insl5 (ENSMUSG00000066090)	Dynlt5 (ENSMUSG00000028523)	Sgip1 (ENSMUSG00000028524)	Pde4b (ENSMUSG00000028525)	Gm12789 (ENSMUSG00000078625)	Gm12790 (ENSMUSG00000078626)	Pramel19 (ENSMUSG00000070890)	Pramel18 (ENSMUSG00000037028)	C130073F10Rik (ENSMUSG00000046133)	Pramel17 (ENSMUSG00000035201)	Lepr (ENSMUSG00000057722)	Leprot (ENSMUSG00000035212)	Dnajc6 (ENSMUSG00000028528)	Ak4 (ENSMUSG00000028527)	Jak1 (ENSMUSG00000028530) #22	Raver2 (ENSMUSG00000035275) #23	Cachd1 (ENSMUSG00000028532) #25	Ube2u (ENSMUSG00000069733) #26	Ror1 (ENSMUSG00000035305) #27	Pgm1 (ENSMUSG00000025791)	Efcab7 (ENSMUSG00000073791)	Itgb3bp (ENSMUSG00000028549)	Alg6 (ENSMUSG00000073792)	Foxd3 (ENSMUSG00000067261)	Atg4c (ENSMUSG00000028550)	Angptl3 (ENSMUSG00000028553)	Dock7 (ENSMUSG00000028556)	Usp1 (ENSMUSG00000028560)	I0C0044D17Rik (ENSMUSG00000073794)	Kank4 (ENSMUSG00000035407)
Ryukyu mouse	MODERN SPECIES	13	Mier1 (MGP_CAROLIEiJ_G0026218)	Dnai4 (MGP_CAROLIEiJ_G0026217)	Insl5 (MGP_CAROLIEiJ_G0026216)	MGP_CAROLIEiJ_G0026215	Sgip1 (MGP_CAROLIEiJ_G0026214)	Pde4b (MGP_CAROLIEiJ_G0026213)	Gm12789 (MGP_CAROLIEiJ_G0026212)	MGP_CAROLIEiJ_G0026211	MGP_CAROLIEiJ_G0026210	C130073F10Rik (MGP_CAROLIEiJ_G0026209)	MGP_CAROLIEiJ_G0026208	Lepr (MGP_CAROLIEiJ_G0026207)	Leprot (MGP_CAROLIEiJ_G0026206)	Dnajc6 (MGP_CAROLIEiJ_G0026205)	Ak4 (MGP_CAROLIEiJ_G0026204)	Jak1 (MGP_CAROLIEiJ_G0026203) #22	Raver2 (MGP_CAROLIEiJ_G0026202) #23	MGP_CAROLIEiJ_G0026201 #24	Cachd1 (MGP_CAROLIEiJ_G0026200) #25	Ube2u (MGP_CAROLIEiJ_G0026199) #26	Ror1 (MGP_CAROLIEiJ_G0026198) #27	Pgm1 (MGP_CAROLIEiJ_G0026197)	MGP_CAROLIEiJ_G0026196	Itgb3bp (MGP_CAROLIEiJ_G0026195)	Alg6 (MGP_CAROLIEiJ_G0026194)	Foxd3 (MGP_CAROLIEiJ_G0026193)	MGP_CAROLIEiJ_G0026192	Atg4c (MGP_CAROLIEiJ_G0026191)	Angptl3 (MGP_CAROLIEiJ_G0026190)	Dock7 (MGP_CAROLIEiJ_G0026189)	MGP_CAROLIEiJ_G0026188
Shrew mouse	MODERN SPECIES	19	Slc35d1 (MGP_PahariEiJ_G0028555)	Mier1 (MGP_PahariEiJ_G0028554)	Dnai4 (MGP_PahariEiJ_G0028553)	Insl5 (MGP_PahariEiJ_G0028552)	MGP_PahariEiJ_G0028551	Sgip1 (MGP_PahariEiJ_G0028550)	Pde4b (MGP_PahariEiJ_G0028549)	MGP_PahariEiJ_G0028548	MGP_PahariEiJ_G0028547	MGP_PahariEiJ_G0028546	Pramel17 (MGP_PahariEiJ_G0028545)	Lepr (MGP_PahariEiJ_G0028544)	Leprot (MGP_PahariEiJ_G0028543)	Dnajc6 (MGP_PahariEiJ_G0028542)	Ak4 (MGP_PahariEiJ_G0028541)	Jak1 (MGP_PahariEiJ_G0028540) #22	Raver2 (MGP_PahariEiJ_G0028539) #23	MGP_PahariEiJ_G0028538 #24	Cachd1 (MGP_PahariEiJ_G0028537) #25	MGP_PahariEiJ_G0028536 #26	Ror1 (MGP_PahariEiJ_G0028535) #27	Pgm1 (MGP_PahariEiJ_G0028534)	MGP_PahariEiJ_G0028533	Itgb3bp (MGP_PahariEiJ_G0028532)	Alg6 (MGP_PahariEiJ_G0028531)	Foxd3 (MGP_PahariEiJ_G0028530)	MGP_PahariEiJ_G0028529	Atg4c (MGP_PahariEiJ_G0028528)	Angptl3 (MGP_PahariEiJ_G0028527)	Dock7 (MGP_PahariEiJ_G0028526)	Usp1 (MGP_PahariEiJ_G0028525)
Rat	MODERN SPECIES	15	Mier1 (ENSRNOG00000007175)	Dnai4 (ENSRNOG00000006999)	ENSRNOG00000067831	Dynlt5 (ENSRNOG00000023100)	Sgip1 (ENSRNOG00000006357)	Pde4b (ENSRNOG00000005905)	LOC120096581 (ENSRNOG00000045614)	ENSRNOG00000067146	Pramef12-ps1 (ENSRNOG00000037977)	ENSRNOG00000069853	ENSRNOG00000069037	Lepr (ENSRNOG00000023664)	Leprot (ENSRNOG00000050849)	Dnajc6 (ENSRNOG00000052887)	Ak4 (ENSRNOG00000045738)	Jak1 (ENSRNOG00000011157) #22	Raver2 (ENSRNOG00000023812) #23	Cachd1 (ENSRNOG00000010514) #25	Ube2u (ENSRNOG00000023895) #26	Ror1 (ENSRNOG00000029449) #27	Pgm1 (ENSRNOG00000009889)	Efcab7 (ENSRNOG00000009782)	Itgb3bp (ENSRNOG00000009116)	Alg6 (ENSRNOG00000009045)	Foxd3 (ENSRNOG00000066522)	ENSRNOG00000064901	Atg4c (ENSRNOG00000008767)	Angptl3 (ENSRNOG00000008638)	Dock7 (ENSRNOG00000008298)	Usp1 (ENSRNOG00000007890)	Kank4 (ENSRNOG00000007779)
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000160247	ENSGT00940000158038	ENSGT00390000007027	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568.g.a	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000160247	ENSGT00940000158038	ENSGT00390000007027	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568.g.a	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468
Prairie vole	MODERN SPECIES	1	Dab1 (ENSMOCG00000006254)	Oma1 (ENSMOCG00000017366)	4921539E11Rik (ENSMOCG00000012861)	Slc35d1 (ENSMOCG00000011734)	Mier1 (ENSMOCG00000004857)	Dnai4 (ENSMOCG00000022543)	Insl5 (ENSMOCG00000017365)	Dynlt5 (ENSMOCG00000016376)	Sgip1 (ENSMOCG00000020243)	ENSMOCG00000007698	Pde4b (ENSMOCG00000017467)	Lepr (ENSMOCG00000014570)	Leprot (ENSMOCG00000019296)	Dnajc6 (ENSMOCG00000018708)	Ak4 (ENSMOCG00000014444)	Jak1 (ENSMOCG00000011865) #22	Raver2 (ENSMOCG00000018087) #23	Cachd1 (ENSMOCG00000020004) #25	ENSMOCG00000013769 #26	ENSMOCG00000009548	Ror1 (ENSMOCG00000010797) #27	Pgm1 (ENSMOCG00000011278)	Efcab7 (ENSMOCG00000005332)	Itgb3bp (ENSMOCG00000020964)	Alg6 (ENSMOCG00000007266)	Foxd3 (ENSMOCG00000003755)	ENSMOCG00000021953	Atg4c (ENSMOCG00000013316)	Angptl3 (ENSMOCG00000010506)	Dock7 (ENSMOCG00000012407)	Usp1 (ENSMOCG00000013703)
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000012355	Slc35d1 (ENSPEMG00000024230)	Mier1 (ENSPEMG00000018047)	Dnai4 (ENSPEMG00000023810)	Insl5 (ENSPEMG00000007310)	Dynlt5 (ENSPEMG00000031134)	Sgip1 (ENSPEMG00000023234)	Pde4b (ENSPEMG00000021904)	ENSPEMG00000021391	ENSPEMG00000029823	ENSPEMG00000005306	Lepr (ENSPEMG00000013702)	Leprot (ENSPEMG00000016339)	Dnajc6 (ENSPEMG00000010017)	Ak4 (ENSPEMG00000016088)	Jak1 (ENSPEMG00000004628) #22	Raver2 (ENSPEMG00000001332) #23	Cachd1 (ENSPEMG00000018442) #25	ENSPEMG00000024764	ENSPEMG00000028140 #26	Ror1 (ENSPEMG00000009106) #27	Pgm1 (ENSPEMG00000000464)	Efcab7 (ENSPEMG00000018535)	Itgb3bp (ENSPEMG00000011292)	Alg6 (ENSPEMG00000018498)	ENSPEMG00000016606	ENSPEMG00000026760	Atg4c (ENSPEMG00000012725)	Angptl3 (ENSPEMG00000000689)	Dock7 (ENSPEMG00000018126)	Usp1 (ENSPEMG00000026352)
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000160247	ENSGT00940000158038	ENSGT00390000007027	ENSGT00390000010146	ENSGT00940000155665.j	ENSGT01030000234573.A.b.a	ENSGT00940000156209	ENSGT00940000154396.b.b	ENSGT00940000160185	ENSGT00940000156301	ENSGT00940000155190	ENSGT00730000111209	ENSGT00390000006503.a	ENSGT00940000158755	ENSGT00940000154568.g.a	ENSGT00940000157092 #22	ENSGT00940000158648 #23	ENSGT00940000157568 #25	ENSGT00940000162256 #26	ENSGT00940000153947.B #27	ENSGT00940000155542.b	ENSGT00390000015466	ENSGT00390000004336	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00860000136250	ENSGT00530000063000.a.a.a	ENSGT00940000156746	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468
Golden Hamster	MODERN SPECIES	849												Lepr (ENSMAUG00000005584)	Leprot (ENSMAUG00000011623)	Dnajc6 (ENSMAUG00000013619)	ENSMAUG00000009918	Jak1 (ENSMAUG00000010024) #22	Raver2 (ENSMAUG00000004248) #23	Cachd1 (ENSMAUG00000000758) #25
Chinese hamster chok1gshd	MODERN SPECIES	111	ENSCGRG00001022662	Oma1 (ENSCGRG00001019711)	4921539E11Rik (ENSCGRG00001020618)	Slc35d1 (ENSCGRG00001022056)	Mier1 (ENSCGRG00001002839)	Dnai4 (ENSCGRG00001013824)	Insl5 (ENSCGRG00001018011)	Dynlt5 (ENSCGRG00001018434)	Sgip1 (ENSCGRG00001006459)	Pde4b (ENSCGRG00001000502)	Lepr (ENSCGRG00001013297)	Leprot (ENSCGRG00001018267)	Dnajc6 (ENSCGRG00001021227)	ENSCGRG00001024354	ENSCGRG00001003307	Jak1 (ENSCGRG00001008727) #22	Raver2 (ENSCGRG00001011852) #23	Cachd1 (ENSCGRG00001024125) #25	Ube2u (ENSCGRG00001024744) #26	ENSCGRG00001023231	Ror1 (ENSCGRG00001015667) #27	Pgm1 (ENSCGRG00001024185)	Efcab7 (ENSCGRG00001013291)	Itgb3bp (ENSCGRG00001023317)	Alg6 (ENSCGRG00001024513)	Foxd3 (ENSCGRG00001009393)	ENSCGRG00001002098	Atg4c (ENSCGRG00001000630)	ENSCGRG00001002780	Dock7 (ENSCGRG00001017762)	Angptl3 (ENSCGRG00001024053)