Sarcopterygii ANCESTRAL SPECIES 843 ENSGT00950000182891.a.a.a #22 ENSGT00390000010331 ENSGT00940000165890 Tetrapoda ANCESTRAL SPECIES 629 ENSGT00950000182891.a.a.a #22 ENSGT00390000010331 Amniota ANCESTRAL SPECIES 15 ENSGT00940000160977 ENSGT00940000172107 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT01030000234542.b.a.a.b.a.b ##24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Mammalia ANCESTRAL SPECIES 28 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 Theria ANCESTRAL SPECIES 22 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 Eutheria ANCESTRAL SPECIES 8 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00940000159331.b ENSGT00390000014572 ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Primates ANCESTRAL SPECIES 2 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Haplorrhini ANCESTRAL SPECIES 17 ENSGT00510000048252 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Simiiformes ANCESTRAL SPECIES 2 ENSGT00510000048252 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Catarrhini ANCESTRAL SPECIES 20 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 Rhinopithecus ANCESTRAL SPECIES 221 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00440000034918.r.i ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 Black snub-nosed monkey MODERN SPECIES 270 APH1B (ENSRBIG00000033548) #20 RAB8B (ENSRBIG00000034579) #21 RPS27L (ENSRBIG00000039205) #22 LACTB (ENSRBIG00000036448) #23 TPM1 (ENSRBIG00000041883) #24 TLN2 (ENSRBIG00000044822) #25 ENSRBIG00000033740 #26 C2CD4B (ENSRBIG00000043118) #27 C2CD4A (ENSRBIG00000041179) #28 VPS13C (ENSRBIG00000012575) #29 Golden snub-nosed monkey MODERN SPECIES 1781 APH1B (ENSRROG00000011379) #20 RAB8B (ENSRROG00000034232) #21 RPS27L (ENSRROG00000033177) #22 LACTB (ENSRROG00000005892) #23 TPM1 (ENSRROG00000028719) #24 ENSRROG00000029301 TLN2 (ENSRROG00000035156) #25 ENSRROG00000038361 #26 C2CD4B (ENSRROG00000040328) #27 VPS13C (ENSRROG00000031121) #29 RORA (ENSRROG00000044355) ICE2 (ENSRROG00000043475) ANXA2 (ENSRROG00000044822) FOXB1 (ENSRROG00000002054) BNIP2 (ENSRROG00000039446) GTF2A2 (ENSRROG00000042120) GCNT3 (ENSRROG00000010325) ENSRROG00000039634 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Macaca ANCESTRAL SPECIES 1 ENSGT00390000008748.b ENSGT00390000005300.b ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000154384.h.b Pig-tailed macaque MODERN SPECIES 77 ENSMNEG00000043120 TRIP4 (ENSMNEG00000033592) PCLAF (ENSMNEG00000030492) CSNK1G1 (ENSMNEG00000044820) PPIB (ENSMNEG00000041616) SNX22 (ENSMNEG00000032129) SNX1 (ENSMNEG00000040604) ENSMNEG00000038611 DAPK2 (ENSMNEG00000037814) HERC1 (ENSMNEG00000042046) FBXL22 (ENSMNEG00000003587) USP3 (ENSMNEG00000040681) CA12 (ENSMNEG00000035236) APH1B (ENSMNEG00000034795) #20 RAB8B (ENSMNEG00000033725) #21 RPS27L (ENSMNEG00000033448) #22 LACTB (ENSMNEG00000032367) #23 TPM1 (ENSMNEG00000031245) #24 ENSMNEG00000034201 TLN2 (ENSMNEG00000028802) #25 ENSMNEG00000013327 #26 VPS13C (ENSMNEG00000030758) #29 RORA (ENSMNEG00000020975) ICE2 (ENSMNEG00000034514) ANXA2 (ENSMNEG00000043015) FOXB1 (ENSMNEG00000015910) BNIP2 (ENSMNEG00000033516) GTF2A2 (ENSMNEG00000030439) GCNT3 (ENSMNEG00000013859) FAM81A (ENSMNEG00000029984) ENSMNEG00000038663 Macaca_a ANCESTRAL SPECIES 2 ENSGT00390000008748.b ENSGT00390000005300.b ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00390000008820.e.b.a.a.a ENSGT00950000183083.a.d.a #29 ENSGT00940000164709.a.b.b.a.a.a.a.a.b.a ENSGT00940000164709.a.b.b.a.b.b.b.b.a.a.d.b ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 Rhesus MODERN SPECIES 17 ZNF609 (ENSMMUG00000001247) TRIP4 (ENSMMUG00000009882) PCLAF (ENSMMUG00000029603) CSNK1G1 (ENSMMUG00000021124) PPIB (ENSMMUG00000045241) SNX22 (ENSMMUG00000021122) SNX1 (ENSMMUG00000014005) CIAO2A (ENSMMUG00000014004) DAPK2 (ENSMMUG00000018177) HERC1 (ENSMMUG00000012117) FBXL22 (ENSMMUG00000012116) USP3 (ENSMMUG00000012114) CA12 (ENSMMUG00000021338) APH1B (ENSMMUG00000059755) #20 RAB8B (ENSMMUG00000013460) #21 RPS27L (ENSMMUG00000016350) #22 LACTB (ENSMMUG00000003544) #23 TPM1 (ENSMMUG00000001587) #24 ENSMMUG00000056092 TLN2 (ENSMMUG00000011503) #25 C2CD4B (ENSMMUG00000058198) #27 C2CD4A (ENSMMUG00000060717) #28 ENSMMUG00000013725 VPS13C (ENSMMUG00000001362) #29 ENSMMUG00000054608 ENSMMUG00000062356 ENSMMUG00000063453 ENSMMUG00000058418 ENSMMUG00000058446 ENSMMUG00000054271 ENSMMUG00000050503 Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 3 NXPH2 (ENSMFAG00000039309) SPOPL (ENSMFAG00000033909) ENSMFAG00000040453 ENSMFAG00000035962 ENSMFAG00000049120 THSD7B (ENSMFAG00000031342) ENSMFAG00000058697 ENSMFAG00000042200 CXCR4 (ENSMFAG00000037063) ENSMFAG00000056496 DARS1 (ENSMFAG00000008693) MCM6 (ENSMFAG00000041102) LCT (ENSMFAG00000043296) UBXN4 (ENSMFAG00000002817) R3HDM1 (ENSMFAG00000030331) ENSMFAG00000055707 #22 ZRANB3 (ENSMFAG00000034071) RAB3GAP1 (ENSMFAG00000026109) MAP3K19 (ENSMFAG00000043568) CCNT2 (ENSMFAG00000042791) ACMSD (ENSMFAG00000001001) TMEM163 (ENSMFAG00000004027) MGAT5 (ENSMFAG00000002058) ENSMFAG00000055532 NCKAP5 (ENSMFAG00000035593) LYPD1 (ENSMFAG00000033924) ENSMFAG00000055082 ENSMFAG00000054954 GPR39 (ENSMFAG00000041717) SLC35F5 (ENSMFAG00000001843) ACTR3 (ENSMFAG00000041594) Crab-eating macaque MODERN SPECIES 17 ENSMFAG00000000382 ENSMFAG00000065223 CSNK1G1 (ENSMFAG00000002355) PPIB (ENSMFAG00000000853) SNX22 (ENSMFAG00000042949) SNX1 (ENSMFAG00000040273) CIAO2A (ENSMFAG00000035924) DAPK2 (ENSMFAG00000028166) ENSMFAG00000064675 HERC1 (ENSMFAG00000042846) FBXL22 (ENSMFAG00000000573) USP3 (ENSMFAG00000016075) CA12 (ENSMFAG00000040970) APH1B (ENSMFAG00000050606) #20 RAB8B (ENSMFAG00000054576) #21 ENSMFAG00000039460 #22 LACTB (ENSMFAG00000001322) #23 ENSMFAG00000030943 #24 TLN2 (ENSMFAG00000003975) #25 ENSMFAG00000052652 #26 ENSMFAG00000057223 ENSMFAG00000034175 #27 ENSMFAG00000053675 #27 ENSMFAG00000030850 VPS13C (ENSMFAG00000001003) #29 ENSMFAG00000055861 ENSMFAG00000054832 ENSMFAG00000058783 ENSMFAG00000055173 RORA (ENSMFAG00000043163) ICE2 (ENSMFAG00000036919) Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00390000008820.e.b.a.a.a.a ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00440000034918.r.i ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 Olive baboon MODERN SPECIES 17 ZNF609 (ENSPANG00000016751) TRIP4 (ENSPANG00000016750) PCLAF (ENSPANG00000016813) CSNK1G1 (ENSPANG00000016816) PPIB (ENSPANG00000046216) SNX22 (ENSPANG00000016815) SNX1 (ENSPANG00000016878) ENSPANG00000016877 DAPK2 (ENSPANG00000016876) HERC1 (ENSPANG00000016930) FBXL22 (ENSPANG00000029475) USP3 (ENSPANG00000016961) CA12 (ENSPANG00000016960) APH1B (ENSPANG00000016959) #20 RAB8B (ENSPANG00000016985) #21 RPS27L (ENSPANG00000034038) #22 LACTB (ENSPANG00000016984) #23 ENSPANG00000016983 #24 ENSPANG00000048538 ENSPANG00000001886 ENSPANG00000042891 ENSPANG00000031248 ENSPANG00000017172 ENSPANG00000040994 ENSPANG00000017201 ENSPANG00000043268 ENSPANG00000017200 ENSPANG00000050431 FOXB1 (ENSPANG00000000869) ENSPANG00000017199 GTF2A2 (ENSPANG00000032423) Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00390000008820.e.b.a.a.a.a ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Drill MODERN SPECIES 440 MSTN (ENSMLEG00000009875) C2orf88 (ENSMLEG00000002411) HIBCH (ENSMLEG00000029940) INPP1 (ENSMLEG00000031756) MFSD6 (ENSMLEG00000037622) NEMP2 (ENSMLEG00000003080) NAB1 (ENSMLEG00000042030) GLS (ENSMLEG00000043417) ENSMLEG00000038983 STAT1 (ENSMLEG00000038755) STAT4 (ENSMLEG00000032638) MYO1B (ENSMLEG00000043715) NABP1 (ENSMLEG00000038424) CAVIN2 (ENSMLEG00000037420) TMEFF2 (ENSMLEG00000031779) ENSMLEG00000001178 #22 ENSMLEG00000029437 Sooty mangabey MODERN SPECIES 336 ENSCATG00000037586 TRIP4 (ENSCATG00000041144) PCLAF (ENSCATG00000025742) CSNK1G1 (ENSCATG00000043325) PPIB (ENSCATG00000040323) SNX22 (ENSCATG00000002979) SNX1 (ENSCATG00000033770) CIAO2A (ENSCATG00000033389) DAPK2 (ENSCATG00000043801) HERC1 (ENSCATG00000031246) FBXL22 (ENSCATG00000033595) USP3 (ENSCATG00000026128) CA12 (ENSCATG00000029646) APH1B (ENSCATG00000031142) #20 RAB8B (ENSCATG00000034026) #21 RPS27L (ENSCATG00000019220) #22 LACTB (ENSCATG00000032182) #23 TPM1 (ENSCATG00000043567) #24 TLN2 (ENSCATG00000039955) #25 ENSCATG00000020724 #26 VPS13C (ENSCATG00000041944) #29 RORA (ENSCATG00000041834) ICE2 (ENSCATG00000043106) ANXA2 (ENSCATG00000043236) ENSCATG00000034012 FOXB1 (ENSCATG00000021214) ENSCATG00000033079 BNIP2 (ENSCATG00000039445) ENSCATG00000040454 GCNT3 (ENSCATG00000040930) FAM81A (ENSCATG00000031214) Hominoidea ANCESTRAL SPECIES 20 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00910000148040 ENSGT00680000100037.g.a.b.a.a ENSGT00940000158531 Gibbon MODERN SPECIES 21 PCLAF (ENSNLEG00000029458) CSNK1G1 (ENSNLEG00000012422) ENSNLEG00000027968 PPIB (ENSNLEG00000012419) SNX22 (ENSNLEG00000012416) SNX1 (ENSNLEG00000012400) CIAO2A (ENSNLEG00000033312) ENSNLEG00000012381 HERC1 (ENSNLEG00000012301) ENSNLEG00000012299 ENSNLEG00000029982 USP3 (ENSNLEG00000012274) CA12 (ENSNLEG00000012252) APH1B (ENSNLEG00000012240) #20 RAB8B (ENSNLEG00000012227) #21 RPS27L (ENSNLEG00000027571) #22 LACTB (ENSNLEG00000012215) #23 ENSNLEG00000012145 #24 ENSNLEG00000006575 ENSNLEG00000012111 #25 ENSNLEG00000031415 #27 C2CD4A (ENSNLEG00000012098) #28 VPS13C (ENSNLEG00000011894) #29 RORA (ENSNLEG00000011865) ICE2 (ENSNLEG00000011832) ANXA2 (ENSNLEG00000011678) FOXB1 (ENSNLEG00000011675) ENSNLEG00000028766 ENSNLEG00000027282 ENSNLEG00000011659 GTF2A2 (ENSNLEG00000030007) Hominidae ANCESTRAL SPECIES 22 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00440000034918.r.i ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT01010000222997 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a.m ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000153341.b.p.a.b.b.b.b.g.a ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000163765.e.b #27 ENSGT00940000163765.e.a #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00440000034918.r.i ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 Human MODERN SPECIES 6 ZNF609 (ENSG00000180357) TRIP4 (ENSG00000103671) PCLAF (ENSG00000166803) CSNK1G1 (ENSG00000169118) PPIB (ENSG00000166794) SNX22 (ENSG00000157734) SNX1 (ENSG00000028528) CIAO2A (ENSG00000166797) DAPK2 (ENSG00000035664) HERC1 (ENSG00000103657) FBXL22 (ENSG00000197361) USP3 (ENSG00000140455) CA12 (ENSG00000074410) APH1B (ENSG00000138613) #20 RAB8B (ENSG00000166128) #21 RPS27L (ENSG00000185088) #22 LACTB (ENSG00000103642) #23 TPM1 (ENSG00000140416) #24 TLN2 (ENSG00000171914) #25 C2CD4B (ENSG00000205502) #27 C2CD4A (ENSG00000198535) #28 VPS13C (ENSG00000129003) #29 RORA (ENSG00000069667) ICE2 (ENSG00000128915) ANXA2 (ENSG00000182718) FOXB1 (ENSG00000171956) BNIP2 (ENSG00000140299) GTF2A2 (ENSG00000140307) GCNT3 (ENSG00000140297) FAM81A (ENSG00000157470) LDHAL6B (ENSG00000171989) Gorilla MODERN SPECIES 6 PCLAF (ENSGGOG00000003697) CSNK1G1 (ENSGGOG00000004826) ENSGGOG00000042669 PPIB (ENSGGOG00000011086) ENSGGOG00000038781 SNX1 (ENSGGOG00000011072) CIAO2A (ENSGGOG00000016550) ENSGGOG00000016537 HERC1 (ENSGGOG00000013126) ENSGGOG00000024384 ENSGGOG00000044118 USP3 (ENSGGOG00000015288) CA12 (ENSGGOG00000002094) APH1B (ENSGGOG00000043020) #20 RAB8B (ENSGGOG00000008799) #21 RPS27L (ENSGGOG00000025910) #22 LACTB (ENSGGOG00000014658) #23 TPM1 (ENSGGOG00000009130) #24 TLN2 (ENSGGOG00000015139) #25 ENSGGOG00000043465 #26 C2CD4B (ENSGGOG00000025149) #27 ENSGGOG00000024083 #28 VPS13C (ENSGGOG00000016853) #29 RORA (ENSGGOG00000000541) ENSGGOG00000040058 ENSGGOG00000040146 ICE2 (ENSGGOG00000022206) ENSGGOG00000009738 FOXB1 (ENSGGOG00000024062) ENSGGOG00000040675 ENSGGOG00000042348 Platyrrhini ANCESTRAL SPECIES 27 ENSGT00510000048252 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765.f ##28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405.jb Mas night monkey MODERN SPECIES 1013 RAB38 (ENSANAG00000028038) ENSANAG00000009144 #22 CTSC (ENSANAG00000032347) GRM5 (ENSANAG00000027687) TYR (ENSANAG00000022233) NOX4 (ENSANAG00000035468) FOLH1 (ENSANAG00000029071) TRIM77 (ENSANAG00000024704) ENSANAG00000030789 ENSANAG00000026972 ENSANAG00000025882 ENSANAG00000023802 ENSANAG00000028974 NAALAD2 (ENSANAG00000021262) CHORDC1 (ENSANAG00000024414) ENSANAG00000023865 FAT3 (ENSANAG00000026539) Cebidae ANCESTRAL SPECIES 29 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405.jb ENSGT00940000157691 ENSGT00940000156573 Cebidae_a ANCESTRAL SPECIES 39 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00510000047616.b.j ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00390000015930.w ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405.jb ENSGT00940000157691 Capuchin DUPLICATION Capuchin MODERN SPECIES 737 ENSCCAG00000026208 #22 ENSCCAG00000031430 ENSCCAG00000031444 ENSCCAG00000025308 Capuchin MODERN SPECIES 350 ENSCCAG00000023005 TMEM132B (ENSCCAG00000036040) ENSCCAG00000022656 RAB8B (ENSCCAG00000031590) #21 ENSCCAG00000030940 #22 LACTB (ENSCCAG00000030922) #23 TPM1 (ENSCCAG00000037284) #24 ENSCCAG00000031850 ENSCCAG00000034887 TLN2 (ENSCCAG00000035530) #25 ENSCCAG00000028189 VPS13C (ENSCCAG00000015458) #29 Tarsier DUPLICATION Tarsier MODERN SPECIES 4797 RAB8B (ENSTSYG00000011514) #21 ENSTSYG00000011456 #22 LACTB (ENSTSYG00000002014) #23 ENSTSYG00000035118 #24 Tarsier MODERN SPECIES 4052 ENSTSYG00000031946 #22 CTNNA1 (ENSTSYG00000012552) LRRTM2 (ENSTSYG00000012553) HSPA9 (ENSTSYG00000011769) ETF1 (ENSTSYG00000011754) EGR1 (ENSTSYG00000026629) Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Lemuriformes ANCESTRAL SPECIES 8 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Mouse lemur MODERN SPECIES 11 DIO1 (ENSMICG00000014290) YIPF1 (ENSMICG00000014282) NDC1 (ENSMICG00000014272) GLIS1 (ENSMICG00000029546) DMRTB1 (ENSMICG00000014235) LRP8 (ENSMICG00000006407) ENSMICG00000006406 CZIB (ENSMICG00000006397) CPT2 (ENSMICG00000000353) SLC1A7 (ENSMICG00000009206) PODN (ENSMICG00000009201) SCP2 (ENSMICG00000009189) ENSMICG00000038191 ECHDC2 (ENSMICG00000009181) ZYG11A (ENSMICG00000009173) ENSMICG00000042746 #22 ENSMICG00000032234 ENSMICG00000027149 ZYG11B (ENSMICG00000008513) ENSMICG00000034672 SHISAL2A (ENSMICG00000047301) GPX7 (ENSMICG00000031390) TUT4 (ENSMICG00000015853) PRPF38A (ENSMICG00000014193) ORC1 (ENSMICG00000014173) CC2D1B (ENSMICG00000014142) ZFYVE9 (ENSMICG00000014124) ENSMICG00000002807 TXNDC12 (ENSMICG00000042975) RAB3B (ENSMICG00000036580) NRDC (ENSMICG00000002748) Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 91 AQP2 (ENSPCOG00000019564) AQP5 (ENSPCOG00000000865) AQP6 (ENSPCOG00000001175) RACGAP1 (ENSPCOG00000017940) ASIC1 (ENSPCOG00000021809) SMARCD1 (ENSPCOG00000026807) GPD1 (ENSPCOG00000028459) CERS5 (ENSPCOG00000005534) LIMA1 (ENSPCOG00000025292) FAM186A (ENSPCOG00000019884) ENSPCOG00000014557 LARP4 (ENSPCOG00000026291) DIP2B (ENSPCOG00000019428) ATF1 (ENSPCOG00000025429) TMPRSS12 (ENSPCOG00000014801) ENSPCOG00000020301 #22 METTL7A (ENSPCOG00000024184) HIGD1C (ENSPCOG00000025367) ENSPCOG00000018158 ENSPCOG00000021473 LETMD1 (ENSPCOG00000014754) CSRNP2 (ENSPCOG00000014145) TFCP2 (ENSPCOG00000026562) POU6F1 (ENSPCOG00000020545) DAZAP2 (ENSPCOG00000028241) SMAGP (ENSPCOG00000025509) BIN2 (ENSPCOG00000026077) CELA1 (ENSPCOG00000005485) GALNT6 (ENSPCOG00000012585) ENSPCOG00000020940 ENSPCOG00000024224 Coquerels sifaka MODERN SPECIES 325 ADAMTS19 (ENSPCOG00000025835) MINAR2 (ENSPCOG00000019054) CHSY3 (ENSPCOG00000008311) SNX22 (ENSPCOG00000019836) SNX1 (ENSPCOG00000022932) CIAO2A (ENSPCOG00000020991) DAPK2 (ENSPCOG00000015063) HERC1 (ENSPCOG00000005498) ENSPCOG00000022045 FBXL22 (ENSPCOG00000000106) USP3 (ENSPCOG00000014844) CA12 (ENSPCOG00000021575) APH1B (ENSPCOG00000009964) #20 ENSPCOG00000021249 RAB8B (ENSPCOG00000019172) #21 ENSPCOG00000023923 #22 LACTB (ENSPCOG00000023709) #23 TPM1 (ENSPCOG00000016673) #24 TLN2 (ENSPCOG00000020937) #25 ENSPCOG00000017377 #28 VPS13C (ENSPCOG00000025107) #29 Coquerels sifaka MODERN SPECIES 109 ENSPCOG00000000585 PNN (ENSPCOG00000002690) TRAPPC6B (ENSPCOG00000020830) GEMIN2 (ENSPCOG00000016964) ENSPCOG00000020404 SEC23A (ENSPCOG00000024745) CLEC14A (ENSPCOG00000023586) ENSPCOG00000013666 ENSPCOG00000004849 FOXA1 (ENSPCOG00000017250) ENSPCOG00000025334 SLC25A21 (ENSPCOG00000025493) PAX9 (ENSPCOG00000021966) NKX2-8 (ENSPCOG00000018122) NKX2-1 (ENSPCOG00000027817) ENSPCOG00000014459 #22 MBIP (ENSPCOG00000016195) BRMS1L (ENSPCOG00000014548) RALGAPA1 (ENSPCOG00000018136) NFKBIA (ENSPCOG00000018810) ENSPCOG00000018670 ENSPCOG00000016293 PRORP (ENSPCOG00000028674) PPP2R3C (ENSPCOG00000019327) SRP54 (ENSPCOG00000022473) ENSPCOG00000028316 ENSPCOG00000027094 ENSPCOG00000013026 SNX6 (ENSPCOG00000013240) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Glires ANCESTRAL SPECIES 15 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Rodentia ANCESTRAL SPECIES 3 ENSGT00940000170308 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Sciuridae ANCESTRAL SPECIES 11 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765.h #28 ENSGT00940000163765.g #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Marmotini ANCESTRAL SPECIES 9 ENSGT00510000048252.o ENSGT00960000190216 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765.h #28 ENSGT00940000163765.g #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Alpin marmot MODERN SPECIES 7 ENSMMMG00000007518 ENSMMMG00000007521 CSNK1G1 (ENSMMMG00000007575) PPIB (ENSMMMG00000008986) SNX22 (ENSMMMG00000008995) SNX1 (ENSMMMG00000009009) CIAO2A (ENSMMMG00000009021) DAPK2 (ENSMMMG00000009028) HERC1 (ENSMMMG00000009068) ENSMMMG00000009185 ENSMMMG00000009191 USP3 (ENSMMMG00000009199) CA12 (ENSMMMG00000009446) APH1B (ENSMMMG00000009477) #20 RAB8B (ENSMMMG00000009506) #21 RPS27L (ENSMMMG00000009532) #22 TPM1 (ENSMMMG00000009577) #24 TLN2 (ENSMMMG00000010746) #25 ENSMMMG00000011016 ENSMMMG00000011024 #28 ENSMMMG00000011035 #28 VPS13C (ENSMMMG00000011042) #29 RORA (ENSMMMG00000011194) ENSMMMG00000011212 ENSMMMG00000011237 ENSMMMG00000011269 FOXB1 (ENSMMMG00000011291) BNIP2 (ENSMMMG00000011312) GTF2A2 (ENSMMMG00000011388) GCNT3 (ENSMMMG00000011425) FAM81A (ENSMMMG00000011428) Marmotini_b ANCESTRAL SPECIES 4 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.o ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765.h #28 ENSGT00940000163765.g #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Arctic ground squirrel MODERN SPECIES 33 TRIP4 (ENSUPAG00010000337) ENSUPAG00010000325 PCLAF (ENSUPAG00010000314) CSNK1G1 (ENSUPAG00010000036) PPIB (ENSUPAG00010020340) SNX22 (ENSUPAG00010020334) SNX1 (ENSUPAG00010020313) CIAO2A (ENSUPAG00010020303) DAPK2 (ENSUPAG00010020287) HERC1 (ENSUPAG00010020206) FBXL22 (ENSUPAG00010020202) USP3 (ENSUPAG00010020157) CA12 (ENSUPAG00010020142) APH1B (ENSUPAG00010020133) #20 RAB8B (ENSUPAG00010020124) #21 RPS27L (ENSUPAG00010020117) #22 LACTB (ENSUPAG00010020113) #23 TPM1 (ENSUPAG00010020041) #24 TLN2 (ENSUPAG00010019892) #25 ENSUPAG00010019882 #28 ENSUPAG00010019880 #28 VPS13C (ENSUPAG00010019706) #29 RORA (ENSUPAG00010019675) ICE2 (ENSUPAG00010019658) ENSUPAG00010019652 FOXB1 (ENSUPAG00010019648) BNIP2 (ENSUPAG00010019641) GTF2A2 (ENSUPAG00010019628) GCNT3 (ENSUPAG00010019625) FAM81A (ENSUPAG00010019613) MYO1E (ENSUPAG00010019578) Squirrel MODERN SPECIES 71 ZNF609 (ENSSTOG00000028919) TRIP4 (ENSSTOG00000014228) ENSSTOG00000019643 CSNK1G1 (ENSSTOG00000007485) PPIB (ENSSTOG00000005354) SNX22 (ENSSTOG00000026558) SNX1 (ENSSTOG00000005324) CIAO2A (ENSSTOG00000024438) DAPK2 (ENSSTOG00000016080) HERC1 (ENSSTOG00000016063) FBXL22 (ENSSTOG00000016061) USP3 (ENSSTOG00000016055) CA12 (ENSSTOG00000016051) APH1B (ENSSTOG00000016049) #20 RAB8B (ENSSTOG00000016046) #21 RPS27L (ENSSTOG00000014532) #22 LACTB (ENSSTOG00000009971) #23 TPM1 (ENSSTOG00000009955) #24 TLN2 (ENSSTOG00000014824) #25 ENSSTOG00000003290 #28 VPS13C (ENSSTOG00000003166) #29 RORA (ENSSTOG00000012400) ENSSTOG00000032826 ENSSTOG00000023376 FOXB1 (ENSSTOG00000020458) BNIP2 (ENSSTOG00000020930) GTF2A2 (ENSSTOG00000004010) GCNT3 (ENSSTOG00000004004) FAM81A (ENSSTOG00000005017) MYO1E (ENSSTOG00000001282) ENSSTOG00000001275 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 11 ZNF609 (ENSSVLG00005021804) TRIP4 (ENSSVLG00005021760) PCLAF (ENSSVLG00005021677) ENSSVLG00005020987 PPIB (ENSSVLG00005020844) SNX22 (ENSSVLG00005020773) SNX1 (ENSSVLG00005020669) CIAO2A (ENSSVLG00005020595) DAPK2 (ENSSVLG00005020537) HERC1 (ENSSVLG00005019826) FBXL22 (ENSSVLG00005019656) USP3 (ENSSVLG00005019582) CA12 (ENSSVLG00005019375) APH1B (ENSSVLG00005019139) #20 RAB8B (ENSSVLG00005019069) #21 ENSSVLG00005018915 #22 LACTB (ENSSVLG00005018852) #23 TPM1 (ENSSVLG00005018158) #24 TLN2 (ENSSVLG00005017833) #25 ENSSVLG00005017744 #28 ENSSVLG00005017686 #28 VPS13C (ENSSVLG00005014425) #29 RORA (ENSSVLG00005013514) ICE2 (ENSSVLG00005013300) ENSSVLG00005013204 FOXB1 (ENSSVLG00005013050) BNIP2 (ENSSVLG00005012971) GTF2A2 (ENSSVLG00005012828) GCNT3 (ENSSVLG00005012791) ENSSVLG00005012768 FAM81A (ENSSVLG00005012717) Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005015368 ENSSVLG00005015244 YWHAH (ENSSVLG00005015202) SLC5A1 (ENSSVLG00005014942) ENSSVLG00005014768 ENSSVLG00005014557 ENSSVLG00005014505 DEPDC5 (ENSSVLG00005014165) PRR14L (ENSSVLG00005013651) ENSSVLG00005013578 PISD (ENSSVLG00005013477) ENSSVLG00005013121 ENSSVLG00005013045 SFI1 (ENSSVLG00005011756) ENSSVLG00005010969 ENSSVLG00005010889 #22 DRG1 (ENSSVLG00005010798) PATZ1 (ENSSVLG00005010670) PIK3IP1 (ENSSVLG00005010612) LIMK2 (ENSSVLG00005010456) RNF185 (ENSSVLG00005010368) PLA2G3 (ENSSVLG00005010180) INPP5J (ENSSVLG00005009829) SELENOM (ENSSVLG00005009730) SMTN (ENSSVLG00005009610) ENSSVLG00005009558 MORC2 (ENSSVLG00005009391) OSBP2 (ENSSVLG00005008927) C5orf52 (ENSSVLG00005008815) ENSSVLG00005008790 SLC35E4 (ENSSVLG00005008774) Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.dd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 ENSGT00940000157691 Long-tailed chinchilla MODERN SPECIES 157 TRIP4 (ENSCLAG00000006872) PCLAF (ENSCLAG00000006954) CSNK1G1 (ENSCLAG00000008023) GNG5B (ENSCLAG00000017711) PPIB (ENSCLAG00000011151) SNX22 (ENSCLAG00000008526) SNX1 (ENSCLAG00000008927) CIAO2A (ENSCLAG00000012173) DAPK2 (ENSCLAG00000013163) HERC1 (ENSCLAG00000016354) FBXL22 (ENSCLAG00000014965) USP3 (ENSCLAG00000012461) CA12 (ENSCLAG00000009814) APH1B (ENSCLAG00000014885) #20 RAB8B (ENSCLAG00000010690) #21 RPS27L (ENSCLAG00000010811) #22 LACTB (ENSCLAG00000007519) #23 TPM1 (ENSCLAG00000008921) #24 TLN2 (ENSCLAG00000009840) #25 ENSCLAG00000016591 VPS13C (ENSCLAG00000006472) #29 RORA (ENSCLAG00000012113) ENSCLAG00000012071 ENSCLAG00000008269 ENSCLAG00000007067 FOXB1 (ENSCLAG00000009811) BNIP2 (ENSCLAG00000010658) ENSCLAG00000007616 GCNT3 (ENSCLAG00000017684) FAM81A (ENSCLAG00000008454) MYO1E (ENSCLAG00000008802) Degu DUPLICATION Degu MODERN SPECIES 67 TRIP4 (ENSODEG00000016494) ENSODEG00000016410 PCLAF (ENSODEG00000016992) CSNK1G1 (ENSODEG00000016448) PPIB (ENSODEG00000016713) SNX22 (ENSODEG00000016526) SNX1 (ENSODEG00000016535) CIAO2A (ENSODEG00000017473) DAPK2 (ENSODEG00000016756) HERC1 (ENSODEG00000016719) FBXL22 (ENSODEG00000016765) USP3 (ENSODEG00000017024) CA12 (ENSODEG00000016537) APH1B (ENSODEG00000016784) #20 RAB8B (ENSODEG00000016571) #21 ENSODEG00000016936 #22 LACTB (ENSODEG00000016877) #23 TPM1 (ENSODEG00000017042) #24 TLN2 (ENSODEG00000016531) #25 ENSODEG00000016956 ENSODEG00000020499 VPS13C (ENSODEG00000017192) #29 RORA (ENSODEG00000016932) ICE2 (ENSODEG00000017266) ENSODEG00000017529 FOXB1 (ENSODEG00000016892) ENSODEG00000017110 ENSODEG00000017154 ENSODEG00000016827 MYO1E (ENSODEG00000016979) ENSODEG00000017886 Degu MODERN SPECIES 42 PLPP1 (ENSODEG00000017162) ENSODEG00000017001 ENSODEG00000017023 ENSODEG00000016951 IL31RA (ENSODEG00000017222) IL6ST (ENSODEG00000016916) ENSODEG00000016853 ANKRD55 (ENSODEG00000017209) MAP3K1 (ENSODEG00000017328) SETD9 (ENSODEG00000016730) MIER3 (ENSODEG00000017718) GPBP1 (ENSODEG00000016954) PLK2 (ENSODEG00000016972) ENSODEG00000016930 RAB3C (ENSODEG00000016836) ENSODEG00000020417 #22 ENSODEG00000017206 PDE4D (ENSODEG00000017385) DEPDC1B (ENSODEG00000016998) ELOVL7 (ENSODEG00000016616) ENSODEG00000017264 ERCC8 (ENSODEG00000016868) NDUFAF2 (ENSODEG00000016635) ENSODEG00000020436 ZSWIM6 (ENSODEG00000016625) ENSODEG00000016595 ENSODEG00000020416 ENSODEG00000020469 KIF2A (ENSODEG00000016553) DIMT1 (ENSODEG00000016626) ENSODEG00000016524 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 76 FN3KRP (ENSCPOG00000010417) RAB40B (ENSCPOG00000023994) WDR45B (ENSCPOG00000005657) FOXK2 (ENSCPOG00000038382) NARF (ENSCPOG00000000304) CYBC1 (ENSCPOG00000037808) HEXD (ENSCPOG00000003869) OGFOD3 (ENSCPOG00000022303) ENSCPOG00000006828 ENSCPOG00000039282 ENSCPOG00000002971 CSNK1D (ENSCPOG00000010919) SLC16A3 (ENSCPOG00000025481) CCDC57 (ENSCPOG00000010590) FASN (ENSCPOG00000002297) ENSCPOG00000025609 #22 DUS1L (ENSCPOG00000030880) GPS1 (ENSCPOG00000001868) RFNG (ENSCPOG00000021305) ENSCPOG00000031500 Dcxr (ENSCPOG00000026566) RAC3 (ENSCPOG00000013861) LRRC45 (ENSCPOG00000013857) CENPX (ENSCPOG00000035990) ASPSCR1 (ENSCPOG00000014896) NOTUM (ENSCPOG00000012400) MYADML2 (ENSCPOG00000002048) PYCR1 (ENSCPOG00000002045) MAFG (ENSCPOG00000039459) SIRT7 (ENSCPOG00000001834) PCYT2 (ENSCPOG00000001826) Guinea pig MODERN SPECIES 98 HYKK (ENSCPOG00000032222) IREB2 (ENSCPOG00000013905) CRABP1 (ENSCPOG00000001572) SKIC8 (ENSCPOG00000026884) DNAJA4 (ENSCPOG00000001571) ACSBG1 (ENSCPOG00000001566) IDH3A (ENSCPOG00000001563) CIB2 (ENSCPOG00000001562) TBC1D2B (ENSCPOG00000001558) ADAMTS7 (ENSCPOG00000022491) ENSCPOG00000030729 ENSCPOG00000035896 CA12 (ENSCPOG00000035327) APH1B (ENSCPOG00000004803) #20 RAB8B (ENSCPOG00000004799) #21 ENSCPOG00000019525 #22 ENSCPOG00000021901 LACTB (ENSCPOG00000033024) #23 TPM1 (ENSCPOG00000010901) #24 TLN2 (ENSCPOG00000006242) #25 ENSCPOG00000037558 #28 TAF1B (ENSCPOG00000010780) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 19 PPIB (ENSHGLG00000036036) SNX22 (ENSHGLG00000016133) SNX1 (ENSHGLG00000015096) CIAO2A (ENSHGLG00000018054) DAPK2 (ENSHGLG00000013578) HERC1 (ENSHGLG00000015429) ENSHGLG00000006447 USP3 (ENSHGLG00000008193) ENSHGLG00000049466 ENSHGLG00000044085 ENSHGLG00000014469 CA12 (ENSHGLG00000036575) APH1B (ENSHGLG00000031885) #20 ENSHGLG00000042104 RAB8B (ENSHGLG00000049367) #21 ENSHGLG00000008830 #22 LACTB (ENSHGLG00000049143) #23 ENSHGLG00000013579 #24 ENSHGLG00000006753 #25 ENSHGLG00000032199 ENSHGLG00000048789 ENSHGLG00000005786 #29 RORA (ENSHGLG00000010547) NARG2 (ENSHGLG00000041744) ENSHGLG00000008172 ENSHGLG00000038903 FOXB1 (ENSHGLG00000018464) ENSHGLG00000006545 ENSHGLG00000045803 GTF2A2 (ENSHGLG00000037685) GCNT3 (ENSHGLG00000048945) Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000002030 ENSHGLG00000041196 SPATA5 (ENSHGLG00000002665) NUDT6 (ENSHGLG00000040807) ENSHGLG00000032095 ANKRD50 (ENSHGLG00000010124) ENSHGLG00000010627 ENSHGLG00000047556 ENSHGLG00000003394 ENSHGLG00000003167 BBS7 (ENSHGLG00000002879) ENSHGLG00000002599 EXOSC9 (ENSHGLG00000002467) SMIM43 (ENSHGLG00000036790) ENSHGLG00000035708 ENSHGLG00000038676 #22 ENSHGLG00000002280 ENSHGLG00000004934 ENSHGLG00000033298 TNIP3 (ENSHGLG00000003668) NDNF (ENSHGLG00000003417) PRDM5 (ENSHGLG00000003010) ENSHGLG00000040170 ENSHGLG00000004064 ENSHGLG00000047434 ENSHGLG00000000181 ENSHGLG00000049304 PDE5A (ENSHGLG00000000160) ENSHGLG00000050894 USP53 (ENSHGLG00000047262) ENSHGLG00000045384 Naked mole-rat female MODERN SPECIES 14 RAG2 (ENSHGLG00000020564) IFTAP (ENSHGLG00000007037) ENSHGLG00000044878 ENSHGLG00000041917 LRRC4C (ENSHGLG00000042650) ENSHGLG00000047607 ENSHGLG00000013322 TTC17 (ENSHGLG00000017796) HSD17B12 (ENSHGLG00000043869) ALKBH3 (ENSHGLG00000019437) C11orf96 (ENSHGLG00000035452) ACCS (ENSHGLG00000018000) ENSHGLG00000035834 ENSHGLG00000032198 ALX4 (ENSHGLG00000016699) ENSHGLG00000035148 #22 CD82 (ENSHGLG00000035958) TSPAN18 (ENSHGLG00000036138) ENSHGLG00000018116 SLC35C1 (ENSHGLG00000041560) CRY2 (ENSHGLG00000013242) PEX16 (ENSHGLG00000019544) ENSHGLG00000032419 ENSHGLG00000050302 ENSHGLG00000037709 ENSHGLG00000033741 CREB3L1 (ENSHGLG00000048284) ENSHGLG00000032476 ENSHGLG00000042531 ENSHGLG00000034290 AMBRA1 (ENSHGLG00000017564) Rodentia_B ANCESTRAL SPECIES 11 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 330 Zfp609 (ENSDORG00000013522) Trip4 (ENSDORG00000014914) Pclaf (ENSDORG00000014912) Csnk1g1 (ENSDORG00000011978) Ppib (ENSDORG00000003536) Snx22 (ENSDORG00000003534) Snx1 (ENSDORG00000003256) Ciao2a (ENSDORG00000026286) ENSDORG00000012436 Herc1 (ENSDORG00000016189) Fbxl22 (ENSDORG00000027356) Usp3 (ENSDORG00000016188) Car12 (ENSDORG00000012363) ENSDORG00000012361 #20 Rab8b (ENSDORG00000023189) #21 ENSDORG00000007575 #22 Lactb (ENSDORG00000028713) #23 Tpm1 (ENSDORG00000002438) #24 Tln2 (ENSDORG00000001561) #25 Vps13c (ENSDORG00000005969) #29 Rora (ENSDORG00000001826) ENSDORG00000001443 Anxa2 (ENSDORG00000015726) ENSDORG00000024092 Foxb1 (ENSDORG00000027835) ENSDORG00000029842 Bnip2 (ENSDORG00000009318) Gtf2a2 (ENSDORG00000007867) Gcnt3 (ENSDORG00000005165) ENSDORG00000008945 Myo1e (ENSDORG00000008506) Kangaroo rat MODERN SPECIES 405 Samd8 (ENSDORG00000012353) Dusp13 (ENSDORG00000012352) Dusp29 (ENSDORG00000029726) ENSDORG00000005364 Adk (ENSDORG00000012651) Ap3m1 (ENSDORG00000012887) Vcl (ENSDORG00000012886) Plau (ENSDORG00000024803) Camk2g (ENSDORG00000005560) Ndst2 (ENSDORG00000005556) Zswim8 (ENSDORG00000005553) Chchd1 (ENSDORG00000005551) ENSDORG00000005545 Synpo2l (ENSDORG00000014562) Myoz1 (ENSDORG00000010297) ENSDORG00000024079 #22 Usp54 (ENSDORG00000007728) Ppp3cb (ENSDORG00000014611) ENSDORG00000027892 Anxa7 (ENSDORG00000009551) ENSDORG00000029825 ENSDORG00000008275 Dnajc9 (ENSDORG00000008273) Fam149b (ENSDORG00000008270) Ecd (ENSDORG00000007680) ENSDORG00000007677 P4ha1 (ENSDORG00000003405) Pla2g12b (ENSDORG00000002162) Oit3 (ENSDORG00000002161) ENSDORG00000026167 Mcu (ENSDORG00000002160) Myomorpha ANCESTRAL SPECIES 25 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 92 Trip4 (ENSJJAG00000001629) Pclaf (ENSJJAG00000008107) ENSJJAG00000017750 Csnk1g1 (ENSJJAG00000012391) Ppib (ENSJJAG00000022318) Snx22 (ENSJJAG00000013816) Snx1 (ENSJJAG00000004729) ENSJJAG00000014166 Dapk2 (ENSJJAG00000017017) Herc1 (ENSJJAG00000011445) Fbxl22 (ENSJJAG00000005076) Usp3 (ENSJJAG00000023661) Car12 (ENSJJAG00000013683) ENSJJAG00000018987 #20 Rab8b (ENSJJAG00000016477) #21 ENSJJAG00000021616 #22 Lactb (ENSJJAG00000009980) #23 Tpm1 (ENSJJAG00000022370) #24 Tln2 (ENSJJAG00000016766) #25 Vps13c (ENSJJAG00000012718) #29 Rora (ENSJJAG00000018794) ENSJJAG00000019838 Anxa2 (ENSJJAG00000008193) Foxb1 (ENSJJAG00000010310) Bnip2 (ENSJJAG00000012193) ENSJJAG00000016236 Fam81a (ENSJJAG00000021870) Myo1e (ENSJJAG00000010416) Ccnb2 (ENSJJAG00000022154) Rnf111 (ENSJJAG00000013647) Sltm (ENSJJAG00000006970) Lesser Egyptian jerboa MODERN SPECIES 60 ENSJJAG00000020082 ENSJJAG00000015827 Id2 (ENSJJAG00000001304) ENSJJAG00000017500 Rnf144a (ENSJJAG00000019519) Rsad2 (ENSJJAG00000014573) Cmpk2 (ENSJJAG00000014410) ENSJJAG00000014421 Sox11 (ENSJJAG00000020821) ENSJJAG00000001095 ENSJJAG00000008563 #22 ENSJJAG00000019578 Allc (ENSJJAG00000022633) Colec11 (ENSJJAG00000024203) ENSJJAG00000016342 Rps7 (ENSJJAG00000022333) Rnaseh1 (ENSJJAG00000020238) Adi1 (ENSJJAG00000015172) Trappc12 (ENSJJAG00000020597) Eipr1 (ENSJJAG00000017270) Myt1l (ENSJJAG00000007682) Pxdn (ENSJJAG00000014227) Tpo (ENSJJAG00000020157) Sntg2 (ENSJJAG00000019414) Tmem18 (ENSJJAG00000019305) Alkal2 (ENSJJAG00000015616) Muroidea ANCESTRAL SPECIES 23 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Upper Galilee mountains blind mole rat MODERN SPECIES 1653 ENSNGAG00000010326 Herc1 (ENSNGAG00000023224) Fbxl22 (ENSNGAG00000005102) Usp3 (ENSNGAG00000016400) Car12 (ENSNGAG00000023433) ENSNGAG00000010466 #20 Rab8b (ENSNGAG00000013464) #21 Rps27l (ENSNGAG00000020141) #22 Lactb (ENSNGAG00000021792) #23 Tpm1 (ENSNGAG00000019970) #24 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000170308 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Cricetidae ANCESTRAL SPECIES 4 ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00390000005300 ENSGT00510000048252 ENSGT00960000190216 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Prairie vole MODERN SPECIES 13 ENSMOCG00000007532 ENSMOCG00000002331 Csnk1g1 (ENSMOCG00000002807) Ppib (ENSMOCG00000010333) Snx22 (ENSMOCG00000021921) Snx1 (ENSMOCG00000001495) Ciao2a (ENSMOCG00000018290) Dapk2 (ENSMOCG00000014779) Herc1 (ENSMOCG00000019096) Fbxl22 (ENSMOCG00000015109) Usp3 (ENSMOCG00000016014) Car12 (ENSMOCG00000011104) ENSMOCG00000006287 #20 ENSMOCG00000012775 #21 ENSMOCG00000002090 Rps27l (ENSMOCG00000000754) #22 Lactb (ENSMOCG00000022545) #23 Tpm1 (ENSMOCG00000021399) #24 ENSMOCG00000001381 #25 ENSMOCG00000012230 #25 ENSMOCG00000002742 C2cd4a (ENSMOCG00000002214) Vps13c (ENSMOCG00000000853) #29 Rora (ENSMOCG00000016886) Ice2 (ENSMOCG00000000614) Anxa2 (ENSMOCG00000003789) Foxb1 (ENSMOCG00000003704) Bnip2 (ENSMOCG00000021145) Gtf2a2 (ENSMOCG00000012789) Gcnt3 (ENSMOCG00000000478) Fam81a (ENSMOCG00000021727) Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 20 ENSPEMG00000008026 ENSPEMG00000027501 Csnk1g1 (ENSPEMG00000021693) Ppib (ENSPEMG00000020752) Snx22 (ENSPEMG00000020391) Snx1 (ENSPEMG00000021765) Ciao2a (ENSPEMG00000026146) Dapk2 (ENSPEMG00000020347) Herc1 (ENSPEMG00000022291) Fbxl22 (ENSPEMG00000026865) Usp3 (ENSPEMG00000022492) Car12 (ENSPEMG00000020817) ENSPEMG00000017166 #20 ENSPEMG00000020385 #20 Rab8b (ENSPEMG00000022284) #21 ENSPEMG00000022063 #22 Lactb (ENSPEMG00000021795) #23 Gm6525 (ENSPEMG00000024538) Tpm1 (ENSPEMG00000020869) #24 ENSPEMG00000025721 ENSPEMG00000024299 Tln2 (ENSPEMG00000021042) #25 ENSPEMG00000031152 C2cd4b (ENSPEMG00000016908) C2cd4a (ENSPEMG00000013754) Vps13c (ENSPEMG00000016724) #29 Rora (ENSPEMG00000021178) Ice2 (ENSPEMG00000023148) Anxa2 (ENSPEMG00000020921) Foxb1 (ENSPEMG00000026372) Bnip2 (ENSPEMG00000008159) Northern American deer mouse MODERN SPECIES Neurl1a (ENSPEMG00000000552) Sh3pxd2a (ENSPEMG00000028132) Stn1 (ENSPEMG00000013944) Slk (ENSPEMG00000003363) Col17a1 (ENSPEMG00000010272) ENSPEMG00000010098 Cfap43 (ENSPEMG00000007262) ENSPEMG00000000407 Gsto2 (ENSPEMG00000013574) Itprip (ENSPEMG00000025439) Cfap58 (ENSPEMG00000023665) Sorcs3 (ENSPEMG00000016181) ENSPEMG00000026304 ENSPEMG00000025798 Sorcs1 (ENSPEMG00000003793) ENSPEMG00000030986 #22 Xpnpep1 (ENSPEMG00000020919) Add3 (ENSPEMG00000022655) Mxi1 (ENSPEMG00000021100) ENSPEMG00000022058 Dusp5 (ENSPEMG00000018791) ENSPEMG00000024805 Smc3 (ENSPEMG00000009550) Rbm20 (ENSPEMG00000011393) Pdcd4 (ENSPEMG00000002505) Bbip1 (ENSPEMG00000016080) ENSPEMG00000008788 Shoc2 (ENSPEMG00000012491) Adra2a (ENSPEMG00000017638) ENSPEMG00000027920 Gpam (ENSPEMG00000013751) Cricetinae ANCESTRAL SPECIES 6 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00390000003710.c.a.b.a.b ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b Golden Hamster MODERN SPECIES 672 Oaz2 (ENSMAUG00000013089) Zfp609 (ENSMAUG00000014361) Csnk1g1 (ENSMAUG00000020738) Ppib (ENSMAUG00000016277) Snx22 (ENSMAUG00000009971) Snx1 (ENSMAUG00000017060) ENSMAUG00000021107 ENSMAUG00000009344 Dapk2 (ENSMAUG00000018956) Herc1 (ENSMAUG00000020600) Fbxl22 (ENSMAUG00000000756) Usp3 (ENSMAUG00000014840) Car12 (ENSMAUG00000010842) ENSMAUG00000020850 #20 Rab8b (ENSMAUG00000014611) #21 Rps27l (ENSMAUG00000014151) #22 Lactb (ENSMAUG00000000691) #23 Tpm1 (ENSMAUG00000015731) #24 Tln2 (ENSMAUG00000011104) #25 C2cd4b (ENSMAUG00000011284) C2cd4a (ENSMAUG00000001316) Vps13c (ENSMAUG00000013205) #29 Rora (ENSMAUG00000018718) Ice2 (ENSMAUG00000013954) Anxa2 (ENSMAUG00000018332) ENSMAUG00000004371 ENSMAUG00000008646 Foxb1 (ENSMAUG00000020300) Bnip2 (ENSMAUG00000002456) ENSMAUG00000018634 Gcnt3 (ENSMAUG00000005994) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 101 Mesp1 (ENSCGRG00001014587) Wdr93 (ENSCGRG00001000336) Pex11a (ENSCGRG00001017053) Plin1 (ENSCGRG00001013432) ENSCGRG00001011724 Kif7 (ENSCGRG00001015583) Ticrr (ENSCGRG00001012535) Rhcg (ENSCGRG00001023258) Polg (ENSCGRG00001017862) Fanci (ENSCGRG00001020390) Rlbp1 (ENSCGRG00001013382) Abhd2 (ENSCGRG00001001929) Mfge8 (ENSCGRG00001011973) Hapln3 (ENSCGRG00001007307) Acan (ENSCGRG00001025035) ENSCGRG00001003840 #22 ENSCGRG00001016300 Aen (ENSCGRG00001021559) Det1 (ENSCGRG00001015151) Mrps11 (ENSCGRG00001012765) Mrpl46 (ENSCGRG00001001727) Ntrk3 (ENSCGRG00001021632) Agbl1 (ENSCGRG00001015401) Klhl25 (ENSCGRG00001012399) Akap13 (ENSCGRG00001014312) ENSCGRG00001008980 ENSCGRG00001000354 ENSCGRG00001024289 Sv2b (ENSCGRG00001019863) Slco3a1 (ENSCGRG00001017955) St8sia2 (ENSCGRG00001018925) Chinese hamster chok1gshd MODERN SPECIES 212 En2 (ENSCGRG00001019240) Cnpy1 (ENSCGRG00001022362) Rbm33 (ENSCGRG00001021677) Shh (ENSCGRG00001016950) Rnf32 (ENSCGRG00001006621) ENSCGRG00001013740 Lmbr1 (ENSCGRG00001017749) ENSCGRG00001002440 Nom1 (ENSCGRG00001020293) Mnx1 (ENSCGRG00001023539) Ube3c (ENSCGRG00001012001) ENSCGRG00001021591 ENSCGRG00001022947 Il6 (ENSCGRG00001024135) Tomm7 (ENSCGRG00001024471) ENSCGRG00001000775 #22 Hycc1 (ENSCGRG00001014837) ENSCGRG00001002267 Nupl2 (ENSCGRG00001019625) Gpnmb (ENSCGRG00001018141) Malsu1 (ENSCGRG00001007836) Igf2bp3 (ENSCGRG00001011804) Tra2a (ENSCGRG00001019980) Ccdc126 (ENSCGRG00001011659) Fam221a (ENSCGRG00001015242) Stk31 (ENSCGRG00001021953) Npy (ENSCGRG00001016547) Pals2 (ENSCGRG00001014383) Gsdme (ENSCGRG00001000822) Osbpl3 (ENSCGRG00001016467) Cycs (ENSCGRG00001008806) Chinese hamster chok1gshd MODERN SPECIES 207 ENSCGRG00001020749 Trhr (ENSCGRG00001020416) ENSCGRG00001020308 ENSCGRG00001016509 Eny2 (ENSCGRG00001015308) Pkhd1l1 (ENSCGRG00001014470) Ebag9 (ENSCGRG00001009564) Sybu (ENSCGRG00001003740) ENSCGRG00001000584 Kcnv1 (ENSCGRG00001000144) Csmd3 (ENSCGRG00001003870) ENSCGRG00001017800 Trps1 (ENSCGRG00001015890) Eif3h (ENSCGRG00001013118) Utp23 (ENSCGRG00001005218) ENSCGRG00001013378 #22 Rad21 (ENSCGRG00001000050) Aard (ENSCGRG00001018995) Slc30a8 (ENSCGRG00001018604) Med30 (ENSCGRG00001017964) EXT1 (ENSCGRG00001017502) Samd12 (ENSCGRG00001015660) ENSCGRG00001003587 Tnfrsf11b (ENSCGRG00001002425) Colec10 (ENSCGRG00001000745) Mal2 (ENSCGRG00001020378) Ccn3 (ENSCGRG00001020090) Enpp2 (ENSCGRG00001005486) ENSCGRG00001011396 Taf2 (ENSCGRG00001004144) Chinese hamster chok1gshd MODERN SPECIES 284 Trip4 (ENSCGRG00001021158) Pclaf (ENSCGRG00001015611) ENSCGRG00001006652 Ppib (ENSCGRG00001018105) Snx22 (ENSCGRG00001015603) Snx1 (ENSCGRG00001019877) ENSCGRG00001015874 Dapk2 (ENSCGRG00001014149) Herc1 (ENSCGRG00001025001) Fbxl22 (ENSCGRG00001012979) Usp3 (ENSCGRG00001012692) Car12 (ENSCGRG00001005768) ENSCGRG00001019290 #20 ENSCGRG00001018389 #20 Rab8b (ENSCGRG00001023679) #21 Rps27l (ENSCGRG00001020737) #22 Lactb (ENSCGRG00001017416) #23 Tpm1 (ENSCGRG00001021042) #24 Tln2 (ENSCGRG00001010300) #25 C2cd4b (ENSCGRG00001010530) C2cd4a (ENSCGRG00001012662) Vps13c (ENSCGRG00001011049) #29 Rora (ENSCGRG00001017588) Ice2 (ENSCGRG00001014356) Anxa2 (ENSCGRG00001011233) ENSCGRG00001011336 Foxb1 (ENSCGRG00001010230) Bnip2 (ENSCGRG00001022198) ENSCGRG00001010848 Gcnt3 (ENSCGRG00001010296) Fam81a (ENSCGRG00001023777) Chinese hamster chok1gshd MODERN SPECIES 3 Elp3 (ENSCGRG00001002047) Nuggc (ENSCGRG00001024841) Scara5 (ENSCGRG00001004427) Pbk (ENSCGRG00001007773) Esco2 (ENSCGRG00001016894) Ccdc25 (ENSCGRG00001014249) Scara3 (ENSCGRG00001018699) Clu (ENSCGRG00001021841) Gulo (ENSCGRG00001019987) Adam2 (ENSCGRG00001012300) Ephx2 (ENSCGRG00001003555) ENSCGRG00001003198 Chrna2 (ENSCGRG00001025060) Ptk2b (ENSCGRG00001013042) Trim35 (ENSCGRG00001019610) ENSCGRG00001009280 #22 Stmn4 (ENSCGRG00001008937) Adra1a (ENSCGRG00001023093) Dpysl2 (ENSCGRG00001016379) ENSCGRG00001010421 Pnma2 (ENSCGRG00001010753) Bnip3l (ENSCGRG00001021504) Ppp2r2a (ENSCGRG00001015307) Ebf2 (ENSCGRG00001001432) Cdca2 (ENSCGRG00001022349) Kctd9 (ENSCGRG00001022797) Gnrh1 (ENSCGRG00001000327) Dock5 (ENSCGRG00001021195) Nefl (ENSCGRG00001016408) ENSCGRG00001011263 Adam7 (ENSCGRG00001010547) Murinae ANCESTRAL SPECIES 3 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Mus ANCESTRAL SPECIES 4 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #20 ENSGT00390000002049.c.b.u.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Shrew mouse MODERN SPECIES 1 Zfp609 (MGP_PahariEiJ_G0015234) Trip4 (MGP_PahariEiJ_G0015235) Csnk1g1 (MGP_PahariEiJ_G0015237) Ppib (MGP_PahariEiJ_G0015238) Snx22 (MGP_PahariEiJ_G0015239) Snx1 (MGP_PahariEiJ_G0015240) Ciao2a (MGP_PahariEiJ_G0015241) MGP_PahariEiJ_G0015242 Herc1 (MGP_PahariEiJ_G0015243) Fbxl22 (MGP_PahariEiJ_G0015244) Usp3 (MGP_PahariEiJ_G0015245) Car12 (MGP_PahariEiJ_G0015246) Aph1b (MGP_PahariEiJ_G0015247) #20 MGP_PahariEiJ_G0015248 #20 Rab8b (MGP_PahariEiJ_G0015249) #21 MGP_PahariEiJ_G0015250 #22 Lactb (MGP_PahariEiJ_G0015251) #23 MGP_PahariEiJ_G0015252 #24 Tln2 (MGP_PahariEiJ_G0015253) #25 C2cd4b (MGP_PahariEiJ_G0015254) C2cd4a (MGP_PahariEiJ_G0015255) Vps13c (MGP_PahariEiJ_G0015256) #29 Rora (MGP_PahariEiJ_G0015257) Ice2 (MGP_PahariEiJ_G0015258) Anxa2 (MGP_PahariEiJ_G0015259) Foxb1 (MGP_PahariEiJ_G0015260) Bnip2 (MGP_PahariEiJ_G0015261) Gtf2a2 (MGP_PahariEiJ_G0015262) Gcnt3 (MGP_PahariEiJ_G0015263) Fam81a (MGP_PahariEiJ_G0015264) Myo1e (MGP_PahariEiJ_G0015265) Mus_A ANCESTRAL SPECIES 4 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #20 ENSGT00390000002049.c.b.u.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Mus_B ANCESTRAL SPECIES 3 ENSGT00510000048252.m ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #20 ENSGT00390000002049.c.b.u.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Mouse MODERN SPECIES 18 Trip4 (ENSMUSG00000032386) Pclaf (ENSMUSG00000040204) Csnk1g1 (ENSMUSG00000032384) Ppib (ENSMUSG00000032383) Snx22 (ENSMUSG00000039452) Snx1 (ENSMUSG00000032382) Ciao2a (ENSMUSG00000032381) Dapk2 (ENSMUSG00000032380) Herc1 (ENSMUSG00000038664) Fbxl22 (ENSMUSG00000050503) Usp3 (ENSMUSG00000032376) Car12 (ENSMUSG00000032373) Aph1b (ENSMUSG00000032375) #20 Aph1c (ENSMUSG00000053040) #20 Rab8b (ENSMUSG00000036943) #21 Rps27l (ENSMUSG00000036781) #22 Lactb (ENSMUSG00000032370) #23 Tpm1 (ENSMUSG00000032366) #24 Tln2 (ENSMUSG00000052698) #25 C2cd4b (ENSMUSG00000091956) C2cd4a (ENSMUSG00000047990) Vps13c (ENSMUSG00000035284) #29 Rora (ENSMUSG00000032238) Ice2 (ENSMUSG00000032235) Anxa2 (ENSMUSG00000032231) Foxb1 (ENSMUSG00000059246) Bnip2 (ENSMUSG00000011958) Gtf2a2 (ENSMUSG00000033543) Gcnt3 (ENSMUSG00000032226) Fam81a (ENSMUSG00000032224) Myo1e (ENSMUSG00000032220) Mus_C ANCESTRAL SPECIES 8 ENSGT00390000005300 ENSGT00510000048252.m ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b.u.a #20 ENSGT00390000002049.c.b.u.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.o ENSGT00940000162206.p ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.nd ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 spretus MODERN SPECIES 18 Trip4 (MGP_SPRETEiJ_G0033509) Pclaf (MGP_SPRETEiJ_G0033510) Csnk1g1 (MGP_SPRETEiJ_G0033511) Ppib (MGP_SPRETEiJ_G0033512) Snx22 (MGP_SPRETEiJ_G0033513) Snx1 (MGP_SPRETEiJ_G0033514) Ciao2a (MGP_SPRETEiJ_G0033515) MGP_SPRETEiJ_G0033516 Herc1 (MGP_SPRETEiJ_G0033517) Fbxl22 (MGP_SPRETEiJ_G0033518) Usp3 (MGP_SPRETEiJ_G0033519) Car12 (MGP_SPRETEiJ_G0033520) Aph1b (MGP_SPRETEiJ_G0033521) #20 Aph1c (MGP_SPRETEiJ_G0033522) #20 Rab8b (MGP_SPRETEiJ_G0033523) #21 Rps27l (MGP_SPRETEiJ_G0033524) #22 Lactb (MGP_SPRETEiJ_G0033525) #23 Tpm1 (MGP_SPRETEiJ_G0033526) #24 Tln2 (MGP_SPRETEiJ_G0033527) #25 MGP_SPRETEiJ_G0033528 C2cd4a (MGP_SPRETEiJ_G0033529) Vps13c (MGP_SPRETEiJ_G0033530) #29 Rora (MGP_SPRETEiJ_G0033531) Ice2 (MGP_SPRETEiJ_G0033532) Anxa2 (MGP_SPRETEiJ_G0033533) Foxb1 (MGP_SPRETEiJ_G0033534) Bnip2 (MGP_SPRETEiJ_G0033535) Gtf2a2 (MGP_SPRETEiJ_G0033536) Gcnt3 (MGP_SPRETEiJ_G0033537) Fam81a (MGP_SPRETEiJ_G0033538) Myo1e (MGP_SPRETEiJ_G0033539) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3341 ENSMSIG00000022049 Herc1 (ENSMSIG00000022075) Fbxl22 (ENSMSIG00000022189) Usp3 (ENSMSIG00000022205) Car12 (ENSMSIG00000022296) ENSMSIG00000022339 #20 ENSMSIG00000022353 Aph1c (ENSMSIG00000022355) #20 Rab8b (ENSMSIG00000022369) #21 ENSMSIG00000022374 #22 Lactb (ENSMSIG00000022397) #23 Tpm1 (ENSMSIG00000022438) #24 ENSMSIG00000023676 Tln2 (ENSMSIG00000023708) #25 C2cd4b (ENSMSIG00000023890) C2cd4a (ENSMSIG00000023906) Vps13c (ENSMSIG00000023921) #29 Rora (ENSMSIG00000024229) Ice2 (ENSMSIG00000024296) ENSMSIG00000024328 ENSMSIG00000024362 Foxb1 (ENSMSIG00000024373) Bnip2 (ENSMSIG00000024382) Gtf2a2 (ENSMSIG00000024440) Gcnt3 (ENSMSIG00000024447) Steppe mouse MODERN SPECIES 3316 ENSMSIG00000006921 #22 Atp8a1 (ENSMSIG00000006971) Shisa3 (ENSMSIG00000007517) ENSMSIG00000007536 Bend4 (ENSMSIG00000007561) Slc30a9 (ENSMSIG00000007605) Tmem33 (ENSMSIG00000007753) ENSMSIG00000007808 ENSMSIG00000007839 ENSMSIG00000007868 ENSMSIG00000008346 ENSMSIG00000008357 Apbb2 (ENSMSIG00000008399) Nsun7 (ENSMSIG00000009295) Rbm47 (ENSMSIG00000009440) ENSMSIG00000009565 Rat DUPLICATION Rat MODERN SPECIES 18 Pclaf (ENSRNOG00000067723) Csnk1g1 (ENSRNOG00000016620) Ppib (ENSRNOG00000016781) Snx22 (ENSRNOG00000022852) Snx1 (ENSRNOG00000017029) Ciao2a (ENSRNOG00000017119) Dapk2 (ENSRNOG00000017332) Herc1 (ENSRNOG00000051671) Fbxl22 (ENSRNOG00000017684) Usp3 (ENSRNOG00000017714) Car12 (ENSRNOG00000017766) LOC691658 (ENSRNOG00000063302) #20 LOC120094192 (ENSRNOG00000067077) #20 Aph1b (ENSRNOG00000027295) #20 Rab8b (ENSRNOG00000018009) #21 Rps27l (ENSRNOG00000050473) #22 Lactb (ENSRNOG00000018081) #23 Tpm1 (ENSRNOG00000018184) #24 Tln2 (ENSRNOG00000018373) #25 C2cd4b (ENSRNOG00000065921) C2cd4a (ENSRNOG00000034236) Vps13c (ENSRNOG00000030213) #29 Rora (ENSRNOG00000027145) Ice2 (ENSRNOG00000010160) Anxa2 (ENSRNOG00000010362) Foxb1 (ENSRNOG00000068150) Bnip2 (ENSRNOG00000056024) LOC103695118 (ENSRNOG00000056701) Gcnt3 (ENSRNOG00000059540) Fam81a (ENSRNOG00000057501) Myo1e (ENSRNOG00000061928) Rat MODERN SPECIES Synm (ENSRNOG00000014030) LOC108349848 (ENSRNOG00000070349) Igf1r (ENSRNOG00000014187) Pgpep1l (ENSRNOG00000070202) Fam169b (ENSRNOG00000022822) LOC102551255 (ENSRNOG00000049257) Arrdc4 (ENSRNOG00000010775) ENSRNOG00000065206 Nr2f2 (ENSRNOG00000010308) Mctp2 (ENSRNOG00000009932) Rgma (ENSRNOG00000012874) Chd2 (ENSRNOG00000012716) Fam174b (ENSRNOG00000065271) Fam174b (ENSRNOG00000012369) St8sia2 (ENSRNOG00000065528) LOC100360396 (ENSRNOG00000051333) #22 Slco3a1 (ENSRNOG00000032798) Sv2b (ENSRNOG00000011160) Akap13 (ENSRNOG00000010964) LOC103691165 (ENSRNOG00000065273) Klhl25 (ENSRNOG00000010959) Agbl1 (ENSRNOG00000022610) Ntrk3 (ENSRNOG00000018674) ENSRNOG00000067190 Mrps11 (ENSRNOG00000018531) Mrpl46 (ENSRNOG00000018547) Det1 (ENSRNOG00000018515) Isg20 (ENSRNOG00000054561) Aen (ENSRNOG00000018421) Acan (ENSRNOG00000028992) Hapln3 (ENSRNOG00000022321) Lagomorpha ANCESTRAL SPECIES 7 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00940000170308 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.i.a ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 ENSGT00940000157691 Pika MODERN SPECIES 3417 RPS27L (ENSOPRG00000008801) #22 LACTB (ENSOPRG00000008786) #23 TPM1 (ENSOPRG00000008768) #24 TLN2 (ENSOPRG00000008689) #25 Rabbit DUPLICATION Rabbit MODERN SPECIES 11 ENSOCUG00000003897 CASP3 (ENSOCUG00000006627) IRF2 (ENSOCUG00000009229) ENPP6 (ENSOCUG00000011944) STOX2 (ENSOCUG00000009718) TRAPPC11 (ENSOCUG00000010179) RWDD4 (ENSOCUG00000025497) ING2 (ENSOCUG00000011812) CDKN2AIP (ENSOCUG00000005491) ENSOCUG00000033632 ENSOCUG00000034698 WWC2 (ENSOCUG00000016984) DCTD (ENSOCUG00000004708) TENM3 (ENSOCUG00000007616) ENSOCUG00000028118 ENSOCUG00000022735 #22 AGA (ENSOCUG00000002031) ENSOCUG00000022964 NEIL3 (ENSOCUG00000001040) ENSOCUG00000023661 VEGFC (ENSOCUG00000017884) ENSOCUG00000012211 ENSOCUG00000029741 ASB5 (ENSOCUG00000012592) SPATA4 (ENSOCUG00000013569) WDR17 (ENSOCUG00000015110) GPM6A (ENSOCUG00000007631) ENSOCUG00000037142 ENSOCUG00000007714 ENSOCUG00000013889 GLRA3 (ENSOCUG00000017638) Rabbit MODERN SPECIES 1401 ENSOCUG00000023149 #22 GLRA2 (ENSOCUG00000011569) FANCB (ENSOCUG00000010776) MOSPD2 (ENSOCUG00000014560) ENSOCUG00000002735 ASB9 (ENSOCUG00000008322) ASB11 (ENSOCUG00000017754) PIGA (ENSOCUG00000017759) VEGFD (ENSOCUG00000017764) PIR (ENSOCUG00000017770) BMX (ENSOCUG00000017771) ACE2 (ENSOCUG00000017782) ENSOCUG00000027704 CLTRN (ENSOCUG00000013073) CA5B (ENSOCUG00000005571) ENSOCUG00000033298 Rabbit MODERN SPECIES 11 KLF3 (ENSOCUG00000003698) ENSOCUG00000022888 TBC1D1 (ENSOCUG00000012442) PGM2 (ENSOCUG00000013740) ENSOCUG00000036928 RELL1 (ENSOCUG00000003419) C4orf19 (ENSOCUG00000003831) NWD2 (ENSOCUG00000012238) DTHD1 (ENSOCUG00000001098) ARAP2 (ENSOCUG00000015669) ENSOCUG00000036228 ENSOCUG00000010124 ENSOCUG00000023563 PCDH7 (ENSOCUG00000000290) ENSOCUG00000035672 ENSOCUG00000030289 #22 ENSOCUG00000039608 ENSOCUG00000026856 ENSOCUG00000038061 STIM2 (ENSOCUG00000014185) TBC1D19 (ENSOCUG00000013465) CCKAR (ENSOCUG00000013457) RBPJ (ENSOCUG00000013449) SMIM20 (ENSOCUG00000034394) SEL1L3 (ENSOCUG00000017195) SLC34A2 (ENSOCUG00000002944) ANAPC4 (ENSOCUG00000016004) ZCCHC4 (ENSOCUG00000015990) PI4K2B (ENSOCUG00000015972) SEPSECS (ENSOCUG00000008262) LGI2 (ENSOCUG00000004764) Rabbit DUPLICATION Rabbit DUPLICATION Rabbit MODERN SPECIES 19 ENSOCUG00000007143 LRTM2 (ENSOCUG00000020921) ENSOCUG00000033107 ADIPOR2 (ENSOCUG00000017118) WNT5B (ENSOCUG00000013686) FBXL14 (ENSOCUG00000026024) ERC1 (ENSOCUG00000002928) ENSOCUG00000038217 RAD52 (ENSOCUG00000013584) WNK1 (ENSOCUG00000013557) ENSOCUG00000038966 ENSOCUG00000023808 B4GALNT3 (ENSOCUG00000008418) CCDC77 (ENSOCUG00000004505) KDM5A (ENSOCUG00000012946) ENSOCUG00000023846 #22 IQSEC3 (ENSOCUG00000004863) ENSOCUG00000029511 IL17RA (ENSOCUG00000009160) ENSOCUG00000037850 HDHD5 (ENSOCUG00000009168) CECR2 (ENSOCUG00000006950) ENSOCUG00000006959 ENSOCUG00000025885 ENSOCUG00000035158 GPR12 (ENSOCUG00000016272) WASF3 (ENSOCUG00000003536) CDK8 (ENSOCUG00000015595) RNF6 (ENSOCUG00000015583) ENSOCUG00000017521 ENSOCUG00000032256 Rabbit MODERN SPECIES 8 ENSOCUG00000022442 ##22 CSNK1G1 (ENSOCUG00000012015) ENSOCUG00000014619 PPIB (ENSOCUG00000012012) SNX1 (ENSOCUG00000005449) SNX22 (ENSOCUG00000021757) CIAO2A (ENSOCUG00000009575) DAPK2 (ENSOCUG00000000435) HERC1 (ENSOCUG00000014796) FBXL22 (ENSOCUG00000014791) USP3 (ENSOCUG00000014775) CA12 (ENSOCUG00000004632) APH1B (ENSOCUG00000004627) #20 ENSOCUG00000035129 RAB8B (ENSOCUG00000010005) #21 ENSOCUG00000038276 #22 LACTB (ENSOCUG00000009995) #23 ENSOCUG00000030711 TPM1 (ENSOCUG00000014122) #24 TLN2 (ENSOCUG00000013064) #25 ENSOCUG00000038392 ENSOCUG00000031516 ENSOCUG00000010276 #28 VPS13C (ENSOCUG00000002801) #29 RORA (ENSOCUG00000012900) ICE2 (ENSOCUG00000004153) BNIP2 (ENSOCUG00000006277) GTF2A2 (ENSOCUG00000011347) GCNT3 (ENSOCUG00000006282) FAM81A (ENSOCUG00000005790) MYO1E (ENSOCUG00000015835) Rabbit MODERN SPECIES 20 ENSOCUG00000029300 OSBPL1A (ENSOCUG00000008393) ENSOCUG00000024121 TTC39C (ENSOCUG00000017109) LAMA3 (ENSOCUG00000009869) ANKRD29 (ENSOCUG00000009866) NPC1 (ENSOCUG00000009850) RMC1 (ENSOCUG00000009837) RIOK3 (ENSOCUG00000016820) TMEM241 (ENSOCUG00000015482) ENSOCUG00000001524 ENSOCUG00000034381 RPS15 (ENSOCUG00000002862) ENSOCUG00000007333 ENSOCUG00000032900 ENSOCUG00000037512 #22 MIB1 (ENSOCUG00000005755) ENSOCUG00000009176 SNRPD1 (ENSOCUG00000023761) ESCO1 (ENSOCUG00000009587) GREB1L (ENSOCUG00000010962) ENSOCUG00000033695 ROCK1 (ENSOCUG00000004848) USP14 (ENSOCUG00000011595) THOC1 (ENSOCUG00000011601) COLEC12 (ENSOCUG00000022216) CETN1 (ENSOCUG00000009188) CLUL1 (ENSOCUG00000008658) ENSOCUG00000008667 ENOSF1 (ENSOCUG00000008678) YES1 (ENSOCUG00000005874) Rabbit MODERN SPECIES 8 PIGB (ENSOCUG00000007457) CCPG1 (ENSOCUG00000007468) PIERCE2 (ENSOCUG00000039060) DNAAF4 (ENSOCUG00000025031) PYGO1 (ENSOCUG00000011752) ENSOCUG00000027152 NEDD4 (ENSOCUG00000006856) RFX7 (ENSOCUG00000013678) ENSOCUG00000033842 TEX9 (ENSOCUG00000012275) MNS1 (ENSOCUG00000012282) ZNF280D (ENSOCUG00000015094) ENSOCUG00000025662 ENSOCUG00000023894 TCF12 (ENSOCUG00000017812) ENSOCUG00000036890 #22 CGNL1 (ENSOCUG00000003637) MYZAP (ENSOCUG00000002296) POLR2M (ENSOCUG00000036974) ALDH1A2 (ENSOCUG00000016942) AQP9 (ENSOCUG00000009796) LIPC (ENSOCUG00000001647) ADAM10 (ENSOCUG00000016023) ENSOCUG00000006171 SLTM (ENSOCUG00000003327) RNF111 (ENSOCUG00000003338) CCNB2 (ENSOCUG00000001652) MYO1E (ENSOCUG00000015835) FAM81A (ENSOCUG00000005790) GCNT3 (ENSOCUG00000006282) GTF2A2 (ENSOCUG00000011347) Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT01030000234542.b.a.a.b.a.b.l ##24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Equus ANCESTRAL SPECIES 4 ENSGT00510000048252 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT01030000234542.b.a.a.b.a.b.l ##24 ENSGT00940000154699 #25 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Horse MODERN SPECIES CSNK1G1 (ENSECAG00000006597) ENSECAG00000052585 PPIB (ENSECAG00000017164) SNX22 (ENSECAG00000017605) SNX1 (ENSECAG00000019019) CIAO2A (ENSECAG00000010303) DAPK2 (ENSECAG00000012621) HERC1 (ENSECAG00000022635) ENSECAG00000022138 ENSECAG00000060278 FBXL22 (ENSECAG00000016041) USP3 (ENSECAG00000016660) CA12 (ENSECAG00000017217) APH1B (ENSECAG00000001985) #20 RAB8B (ENSECAG00000036923) #21 RPS27L (ENSECAG00000013269) #22 LACTB (ENSECAG00000053700) #23 TPM1 (ENSECAG00000014949) #24 ENSECAG00000050273 ##24 TLN2 (ENSECAG00000020488) #25 ENSECAG00000052463 ENSECAG00000035298 #28 ENSECAG00000038352 #28 VPS13C (ENSECAG00000017182) #29 RORA (ENSECAG00000016384) ICE2 (ENSECAG00000008412) ANXA2 (ENSECAG00000012670) FOXB1 (ENSECAG00000004144) BNIP2 (ENSECAG00000022557) GCNT3 (ENSECAG00000004325) GTF2A2 (ENSECAG00000012182) Donkey MODERN SPECIES 11 CSNK1G1 (ENSEASG00005006542) ENSEASG00005033915 PPIB (ENSEASG00005024211) SNX22 (ENSEASG00005036797) SNX1 (ENSEASG00005006579) CIAO2A (ENSEASG00005036756) DAPK2 (ENSEASG00005006626) ENSEASG00005006635 HERC1 (ENSEASG00005006663) FBXL22 (ENSEASG00005031318) USP3 (ENSEASG00005006813) CA12 (ENSEASG00005005325) APH1B (ENSEASG00005005328) #20 ENSEASG00005005334 RAB8B (ENSEASG00005038003) #21 RPS27L (ENSEASG00005031631) #22 LACTB (ENSEASG00005005348) #23 ENSEASG00005031100 #24 ENSEASG00005024602 ##24 TLN2 (ENSEASG00005005435) #25 ENSEASG00005032522 ENSEASG00005032205 ENSEASG00005030086 VPS13C (ENSEASG00005006073) #29 RORA (ENSEASG00005006718) ICE2 (ENSEASG00005006725) ANXA2 (ENSEASG00005006755) FOXB1 (ENSEASG00005006761) BNIP2 (ENSEASG00005006764) GTF2A2 (ENSEASG00005006771) GCNT3 (ENSEASG00005006772) Chiroptera ANCESTRAL SPECIES 17 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00940000164336 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Microchiroptera ANCESTRAL SPECIES 20 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00930000152855 ENSGT00940000163765 #28 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Microbat MODERN SPECIES 2571 ENSMLUG00000008373 #22 ENSMLUG00000022359 #23 Greater horseshoe bat DUPLICATION Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 2 CHST1 (ENSRFEG00010003717) SYT13 (ENSRFEG00010003732) PRDM11 (ENSRFEG00010003762) TP53I11 (ENSRFEG00010003790) TSPAN18 (ENSRFEG00010003813) CD82 (ENSRFEG00010003839) ALX4 (ENSRFEG00010003877) EXT2 (ENSRFEG00010003919) ACCS (ENSRFEG00010003969) ACCSL (ENSRFEG00010004009) C11orf96 (ENSRFEG00010004030) ALKBH3 (ENSRFEG00010004046) HSD17B12 (ENSRFEG00010004074) TTC17 (ENSRFEG00010004131) API5 (ENSRFEG00010004247) ENSRFEG00010004309 #22 ENSRFEG00010004319 LRRC4C (ENSRFEG00010004345) ENSRFEG00010004357 ENSRFEG00010004372 ENSRFEG00010004383 IFTAP (ENSRFEG00010004417) ENSRFEG00010004464 RAG2 (ENSRFEG00010004473) RAG1 (ENSRFEG00010004482) TRAF6 (ENSRFEG00010004489) PRR5L (ENSRFEG00010004515) COMMD9 (ENSRFEG00010004551) LDLRAD3 (ENSRFEG00010004588) TRIM44 (ENSRFEG00010004609) FJX1 (ENSRFEG00010004625) Greater horseshoe bat MODERN SPECIES 27 TMEM88B (ENSRFEG00010012719) VWA1 (ENSRFEG00010012768) ATAD3A (ENSRFEG00010012817) TMEM240 (ENSRFEG00010013336) ENSRFEG00010013401 FNDC10 (ENSRFEG00010013488) MIB2 (ENSRFEG00010013521) MMP23B (ENSRFEG00010013665) ENSRFEG00010013717 SLC35E2B (ENSRFEG00010013765) NADK (ENSRFEG00010013881) GNB1 (ENSRFEG00010013961) CALML6 (ENSRFEG00010014048) TMEM52 (ENSRFEG00010014083) CFAP74 (ENSRFEG00010014105) ENSRFEG00010014674 #22 GABRD (ENSRFEG00010014702) PRKCZ (ENSRFEG00010014771) FAAP20 (ENSRFEG00010015044) SKI (ENSRFEG00010015103) MORN1 (ENSRFEG00010015167) ENSRFEG00010015323 ENSRFEG00010015344 RER1 (ENSRFEG00010015410) PEX10 (ENSRFEG00010015472) PLCH2 (ENSRFEG00010015517) PANK4 (ENSRFEG00010015587) HES5 (ENSRFEG00010015965) ENSRFEG00010016014 PRXL2B (ENSRFEG00010005744) MMEL1 (ENSRFEG00010005854) Greater horseshoe bat MODERN SPECIES 1 AQP6 (ENSRFEG00010013397) RACGAP1 (ENSRFEG00010013522) ASIC1 (ENSRFEG00010013621) SMARCD1 (ENSRFEG00010013850) GPD1 (ENSRFEG00010014097) COX14 (ENSRFEG00010014161) CERS5 (ENSRFEG00010014190) LIMA1 (ENSRFEG00010014283) ENSRFEG00010014508 ENSRFEG00010014588 LARP4 (ENSRFEG00010014609) DIP2B (ENSRFEG00010015063) ATF1 (ENSRFEG00010015182) TMPRSS12 (ENSRFEG00010015273) ENSRFEG00010015370 ENSRFEG00010015409 #22 HIGD1C (ENSRFEG00010015467) SLC11A2 (ENSRFEG00010015532) LETMD1 (ENSRFEG00010015608) CSRNP2 (ENSRFEG00010015798) TFCP2 (ENSRFEG00010015869) ENSRFEG00010016033 POU6F1 (ENSRFEG00010016067) DAZAP2 (ENSRFEG00010016144) ENSRFEG00010016566 BIN2 (ENSRFEG00010016668) CELA1 (ENSRFEG00010016934) GALNT6 (ENSRFEG00010016956) SLC4A8 (ENSRFEG00010016982) SCN8A (ENSRFEG00010017085) ENSRFEG00010017220 Carnivora ANCESTRAL SPECIES ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Felidae ANCESTRAL SPECIES ENSGT00950000182891.a.a.a #22 Cat DUPLICATION Cat MODERN SPECIES 240 OXSM (ENSFCAG00000041445) NGLY1 (ENSFCAG00000024202) ENSFCAG00000034055 TOP2B (ENSFCAG00000031328) RARB (ENSFCAG00000010409) ENSFCAG00000047352 THRB (ENSFCAG00000022754) ENSFCAG00000026441 NR1D2 (ENSFCAG00000027540) RPL15 (ENSFCAG00000026237) NKIRAS1 (ENSFCAG00000008700) UBE2E1 (ENSFCAG00000035590) UBE2E2 (ENSFCAG00000007748) ZNF385D (ENSFCAG00000027175) SGO1 (ENSFCAG00000035315) ENSFCAG00000033105 #22 KAT2B (ENSFCAG00000004458) PP2D1 (ENSFCAG00000040097) RAB5A (ENSFCAG00000039795) EFHB (ENSFCAG00000004454) KCNH8 (ENSFCAG00000012306) ENSFCAG00000022406 SATB1 (ENSFCAG00000004295) ENSFCAG00000044938 TBC1D5 (ENSFCAG00000004653) PLCL2 (ENSFCAG00000022152) ENSFCAG00000023607 RFTN1 (ENSFCAG00000022758) OXNAD1 (ENSFCAG00000006357) DPH3 (ENSFCAG00000035252) ENSFCAG00000053298 Cat MODERN SPECIES 248 IL19 (ENSFCAG00000006476) IL10 (ENSFCAG00000013515) MAPKAPK2 (ENSFCAG00000013513) DYRK3 (ENSFCAG00000025106) CFHR5 (ENSFCAG00000028672) F13B (ENSFCAG00000005019) ASPM (ENSFCAG00000026890) ZBTB41 (ENSFCAG00000005026) CRB1 (ENSFCAG00000000545) DENND1B (ENSFCAG00000019240) CF1H1orf53 (ENSFCAG00000044924) LHX9 (ENSFCAG00000001815) NEK7 (ENSFCAG00000040336) ATP6V1G3 (ENSFCAG00000035922) PTPRC (ENSFCAG00000015690) ENSFCAG00000029586 #22 NR5A2 (ENSFCAG00000012604) ZNF281 (ENSFCAG00000028447) KIF14 (ENSFCAG00000025507) DDX59 (ENSFCAG00000027373) CAMSAP2 (ENSFCAG00000004594) GPR25 (ENSFCAG00000026788) INAVA (ENSFCAG00000004595) ENSFCAG00000028284 KIF21B (ENSFCAG00000004597) CACNA1S (ENSFCAG00000004605) ASCL5 (ENSFCAG00000044334) TMEM9 (ENSFCAG00000028386) IGFN1 (ENSFCAG00000004609) PKP1 (ENSFCAG00000004610) TNNT2 (ENSFCAG00000004613) Panthera ANCESTRAL SPECIES 9 ENSGT00940000156449 ENSGT00940000153534.A ENSGT00940000154319.v ENSGT00950000182922.a.a.a.b.a.b.a.b.b.c.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00950000182891.a.a.a #22 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.a.a ENSGT00940000154107.b ENSGT00530000064234.k ENSGT00390000001138.b ENSGT00390000004145 Tiger DUPLICATION Tiger MODERN SPECIES 569 LRRC3B (ENSPTIG00000000834) OXSM (ENSPTIG00000020437) NGLY1 (ENSPTIG00000021711) TOP2B (ENSPTIG00000006585) RARB (ENSPTIG00000014154) THRB (ENSPTIG00000015010) ENSPTIG00000001284 NR1D2 (ENSPTIG00000017305) RPL15 (ENSPTIG00000017965) NKIRAS1 (ENSPTIG00000019470) UBE2E1 (ENSPTIG00000005810) UBE2E2 (ENSPTIG00000007932) ZNF385D (ENSPTIG00000009597) ENSPTIG00000016658 KAT2B (ENSPTIG00000018853) ENSPTIG00000021245 #22 PP2D1 (ENSPTIG00000021598) RAB5A (ENSPTIG00000021685) EFHB (ENSPTIG00000021898) KCNH8 (ENSPTIG00000021965) Tiger MODERN SPECIES 313 ENSPTIG00000008227 BMPR2 (ENSPTIG00000013082) NOP58 (ENSPTIG00000013131) SUMO1 (ENSPTIG00000013157) ENSPTIG00000008234 KIAA2012 (ENSPTIG00000013192) CDK15 (ENSPTIG00000013223) ALS2 (ENSPTIG00000013259) MPP4 (ENSPTIG00000013368) TMEM237 (ENSPTIG00000013692) ENSPTIG00000013739 STRADB (ENSPTIG00000013805) TRAK2 (ENSPTIG00000013824) FLACC1 (ENSPTIG00000013844) CASP8 (ENSPTIG00000013873) ENSPTIG00000008242 #22 CASP10 (ENSPTIG00000013894) CFLAR (ENSPTIG00000013930) NDUFB3 (ENSPTIG00000013945) HYCC2 (ENSPTIG00000013955) ORC2 (ENSPTIG00000013974) NIF3L1 (ENSPTIG00000013986) PPIL3 (ENSPTIG00000013998) CLK1 (ENSPTIG00000014025) BZW1 (ENSPTIG00000014068) ENSPTIG00000014167 SGO2 (ENSPTIG00000014211) ENSPTIG00000014226 Panthera_a ANCESTRAL SPECIES 6 ENSGT00940000156449 ENSGT00940000153534.A ENSGT00940000154319.v ENSGT00950000182922.a.a.a.b.a.b.a.b.b.c.b ENSGT00860000133854 ENSGT00940000158239.b ENSGT00940000159606 ENSGT00940000155861.C ENSGT00940000156444 ENSGT00390000005159 ENSGT00390000018209 ENSGT00940000155390 ENSGT00940000158202 ENSGT00400000022323 ENSGT00940000160319 ENSGT00950000182891.a.a.a #22 ENSGT00940000160994 ENSGT00530000064199 ENSGT00390000010316 ENSGT00390000011295.a ENSGT00390000015228 ENSGT00390000003590 ENSGT00940000153189.B ENSGT00940000159722 ENSGT00390000012561.b ENSGT00950000183114.a.b.b.f.a.b ENSGT00950000183114.a.b.b.f.a.a ENSGT00940000154107.b ENSGT00530000064234.k ENSGT00390000001138.b ENSGT00390000004145 lion MODERN SPECIES 8 BMPR2 (ENSPLOG00000011747) NOP58 (ENSPLOG00000011950) ENSPLOG00000012052 ENSPLOG00000012180 KIAA2012 (ENSPLOG00000012218) FZD7 (ENSPLOG00000012419) CDK15 (ENSPLOG00000012480) ALS2 (ENSPLOG00000012986) MPP4 (ENSPLOG00000013660) TMEM237 (ENSPLOG00000014799) ENSPLOG00000015067 STRADB (ENSPLOG00000015110) TRAK2 (ENSPLOG00000015326) FLACC1 (ENSPLOG00000015436) CASP8 (ENSPLOG00000015490) ENSPLOG00000015584 #22 CASP10 (ENSPLOG00000015629) CFLAR (ENSPLOG00000015687) NDUFB3 (ENSPLOG00000015772) HYCC2 (ENSPLOG00000015803) ORC2 (ENSPLOG00000015970) NIF3L1 (ENSPLOG00000016032) PPIL3 (ENSPLOG00000016086) CLK1 (ENSPLOG00000016118) BZW1 (ENSPLOG00000016320) ENSPLOG00000016579 SGO2 (ENSPLOG00000016840) KCTD18 (ENSPLOG00000016872) SPATS2L (ENSPLOG00000016944) MAIP1 (ENSPLOG00000010863) TYW5 (ENSPLOG00000010891) leopard DUPLICATION leopard MODERN SPECIES 5 ZNF385D (ENSPPRG00000005481) ENSPPRG00000004998 KAT2B (ENSPPRG00000003015) ENSPPRG00000002641 #22 PP2D1 (ENSPPRG00000002083) ENSPPRG00000001655 EFHB (ENSPPRG00000000503) KCNH8 (ENSPPRG00000023681) ENSPPRG00000020741 SATB1 (ENSPPRG00000019113) TBC1D5 (ENSPPRG00000015799) ENSPPRG00000010158 PLCL2 (ENSPPRG00000009211) ENSPPRG00000008794 RFTN1 (ENSPPRG00000007488) OXNAD1 (ENSPPRG00000007203) DPH3 (ENSPPRG00000004843) GALNT15 (ENSPPRG00000004449) ANKRD28 (ENSPPRG00000004331) leopard MODERN SPECIES 257 STRADB (ENSPPRG00000015910) TRAK2 (ENSPPRG00000015806) FLACC1 (ENSPPRG00000015567) CASP8 (ENSPPRG00000015120) ENSPPRG00000018874 #22 CASP10 (ENSPPRG00000014877) CFLAR (ENSPPRG00000014286) Caniformia ANCESTRAL SPECIES 12 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT01070000253911 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Caniformia_b ANCESTRAL SPECIES 15 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT01070000253911 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j.mb ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Mustelinae ANCESTRAL SPECIES 66 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j.mb ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Ferret MODERN SPECIES 228 ZNF609 (ENSMPUG00000000567) TRIP4 (ENSMPUG00000000568) PCLAF (ENSMPUG00000000569) CSNK1G1 (ENSMPUG00000000571) PPIB (ENSMPUG00000000574) SNX22 (ENSMPUG00000000582) SNX1 (ENSMPUG00000000602) CIAO2A (ENSMPUG00000000605) DAPK2 (ENSMPUG00000000608) HERC1 (ENSMPUG00000000611) FBXL22 (ENSMPUG00000000624) USP3 (ENSMPUG00000000628) CA12 (ENSMPUG00000000635) APH1B (ENSMPUG00000000639) #20 RAB8B (ENSMPUG00000000643) #21 RPS27L (ENSMPUG00000000647) #22 LACTB (ENSMPUG00000000649) #23 TPM1 (ENSMPUG00000000651) #24 TLN2 (ENSMPUG00000000655) #25 ENSMPUG00000000658 VPS13C (ENSMPUG00000000660) #29 ENSMPUG00000000744 RORA (ENSMPUG00000000745) ICE2 (ENSMPUG00000000759) ANXA2 (ENSMPUG00000000762) FOXB1 (ENSMPUG00000019446) BNIP2 (ENSMPUG00000000804) GCNT3 (ENSMPUG00000019447) Ursidae ANCESTRAL SPECIES 21 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007.p.b ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699.f #25 ENSGT00950000183083.a.d.a #29 ENSGT01070000253911 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j.mb ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Giant Panda MODERN SPECIES 15 TRIP4 (ENSAMEG00000002591) PCLAF (ENSAMEG00000002586) CSNK1G1 (ENSAMEG00000002545) ENSAMEG00000002525 SNX22 (ENSAMEG00000002516) SNX1 (ENSAMEG00000002465) CIAO2A (ENSAMEG00000002448) DAPK2 (ENSAMEG00000002421) HERC1 (ENSAMEG00000002389) FBXL22 (ENSAMEG00000002387) USP3 (ENSAMEG00000002345) CA12 (ENSAMEG00000002328) APH1B (ENSAMEG00000002312) #20 ENSAMEG00000031452 RAB8B (ENSAMEG00000002292) #21 RPS27L (ENSAMEG00000007270) #22 LACTB (ENSAMEG00000007262) #23 ENSAMEG00000007224 #24 TLN2 (ENSAMEG00000012004) #25 VPS13C (ENSAMEG00000017363) #29 ENSAMEG00000017453 RORA (ENSAMEG00000008017) ICE2 (ENSAMEG00000008039) ENSAMEG00000008055 FOXB1 (ENSAMEG00000019472) BNIP2 (ENSAMEG00000005709) GTF2A2 (ENSAMEG00000005744) GCNT3 (ENSAMEG00000018673) FAM81A (ENSAMEG00000004782) MYO1E (ENSAMEG00000004643) CCNB2 (ENSAMEG00000004603) Ursus ANCESTRAL SPECIES 73 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699.f #25 ENSGT00950000183083.a.d.a #29 ENSGT01070000253911 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j.mb ENSGT00940000161970 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Polar bear MODERN SPECIES 282 ENSUMAG00000024552 #22 LACTB (ENSUMAG00000024551) #23 TPM1 (ENSUMAG00000024489) #24 TLN2 (ENSUMAG00000024313) #25 VPS13C (ENSUMAG00000024057) #29 ENSUMAG00000023995 RORA (ENSUMAG00000023981) ICE2 (ENSUMAG00000023974) ENSUMAG00000023968 ENSUMAG00000023966 BNIP2 (ENSUMAG00000023960) GTF2A2 (ENSUMAG00000023959) GCNT3 (ENSUMAG00000023958) FAM81A (ENSUMAG00000023957) MYO1E (ENSUMAG00000023955) CCNB2 (ENSUMAG00000023954) American black bear DUPLICATION American black bear MODERN SPECIES 358 ENSUAMG00000022040 CEACAM18 (ENSUAMG00000022043) ENSUAMG00000022045 ENSUAMG00000022048 KLK14 (ENSUAMG00000022049) KLK13 (ENSUAMG00000022051) KLK12 (ENSUAMG00000022060) KLK11 (ENSUAMG00000022064) KLK10 (ENSUAMG00000022072) KLK9 (ENSUAMG00000022076) ENSUAMG00000022079 KLK7 (ENSUAMG00000022080) KLK6 (ENSUAMG00000022084) KLK5 (ENSUAMG00000022094) ENSUAMG00000022102 #22 KLK4 (ENSUAMG00000022103) ENSUAMG00000022104 KLK15 (ENSUAMG00000022107) ENSUAMG00000022108 ENSUAMG00000022112 ENSUAMG00000022115 ACP4 (ENSUAMG00000022123) CLEC11A (ENSUAMG00000022124) American black bear MODERN SPECIES 8356 ENSUAMG00000005186 #22 Canidae ANCESTRAL SPECIES 15 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921.b ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT01070000253911 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Red fox DUPLICATION Red fox MODERN SPECIES CSNK1G1 (ENSVVUG00000013708) PPIB (ENSVVUG00000013694) SNX22 (ENSVVUG00000013682) SNX1 (ENSVVUG00000013655) ENSVVUG00000013649 CIAO2A (ENSVVUG00000013643) DAPK2 (ENSVVUG00000013611) HERC1 (ENSVVUG00000012408) FBXL22 (ENSVVUG00000012296) ENSVVUG00000011501 ENSVVUG00000011447 CA12 (ENSVVUG00000011399) APH1B (ENSVVUG00000011390) #20 ENSVVUG00000011389 RAB8B (ENSVVUG00000011367) #21 ENSVVUG00000011320 #22 LACTB (ENSVVUG00000011297) #23 ENSVVUG00000011290 TPM1 (ENSVVUG00000011282) #24 TLN2 (ENSVVUG00000009412) #25 VPS13C (ENSVVUG00000002780) #29 ENSVVUG00000002002 ENSVVUG00000001972 ENSVVUG00000001953 RORA (ENSVVUG00000001910) ICE2 (ENSVVUG00000001884) ANXA2 (ENSVVUG00000001871) ENSVVUG00000001864 FOXB1 (ENSVVUG00000001836) BNIP2 (ENSVVUG00000001765) GTF2A2 (ENSVVUG00000001625) Red fox MODERN SPECIES 8 ENSVVUG00000009810 ENSVVUG00000009812 #22 FCGR2B (ENSVVUG00000009816) FCRLA (ENSVVUG00000009820) FCRLB (ENSVVUG00000009827) DUSP12 (ENSVVUG00000009840) ATF6 (ENSVVUG00000009915) OLFML2B (ENSVVUG00000009927) ENSVVUG00000009957 SPATA46 (ENSVVUG00000009973) ENSVVUG00000009977 UHMK1 (ENSVVUG00000009990) UAP1 (ENSVVUG00000010001) DDR2 (ENSVVUG00000010010) HSD17B7 (ENSVVUG00000010017) CCDC190 (ENSVVUG00000010024) RGS4 (ENSVVUG00000010037) Canis_lupus ANCESTRAL SPECIES 17 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000169428 ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00950000184921.b ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT01070000253911 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j.ob ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Dingo MODERN SPECIES 275 UFC1 (ENSCAFG00020000896) USP21 (ENSCAFG00020000899) PPOX (ENSCAFG00020000908) B4GALT3 (ENSCAFG00020000916) ADAMTS4 (ENSCAFG00020000929) NDUFS2 (ENSCAFG00020001001) FCER1G (ENSCAFG00020001016) APOA2 (ENSCAFG00020001024) TOMM40L (ENSCAFG00020001035) NR1I3 (ENSCAFG00020001043) PCP4L1 (ENSCAFG00020001049) MPZ (ENSCAFG00020001052) SDHC (ENSCAFG00020001059) CFAP126 (ENSCAFG00020001068) ENSCAFG00020001072 ENSCAFG00020001079 #22 ENSCAFG00020001085 FCRLA (ENSCAFG00020001094) FCRLB (ENSCAFG00020001110) ENSCAFG00020001115 DUSP12 (ENSCAFG00020001123) ATF6 (ENSCAFG00020001288) OLFML2B (ENSCAFG00020001593) ENSCAFG00020001616 SPATA46 (ENSCAFG00020001639) SH2D1B (ENSCAFG00020001642) UHMK1 (ENSCAFG00020001672) UAP1 (ENSCAFG00020001687) DDR2 (ENSCAFG00020001692) HSD17B7 (ENSCAFG00020001727) ENSCAFG00020001732 Dog DUPLICATION Dog MODERN SPECIES 18 PITPNB (ENSCAFG00845029905) TTC28 (ENSCAFG00845030026) ENSCAFG00845030049 CHEK2 (ENSCAFG00845030072) HSCB (ENSCAFG00845030145) CCDC117 (ENSCAFG00845030178) XBP1 (ENSCAFG00845030211) ZNRF3 (ENSCAFG00845030273) C26H22orf31 (ENSCAFG00845030307) KREMEN1 (ENSCAFG00845030328) EWSR1 (ENSCAFG00845030407) AP1B1 (ENSCAFG00845030558) RHBDD3 (ENSCAFG00845030610) ENSCAFG00845030617 ENSCAFG00845030626 ENSCAFG00845030638 #22 NEFH (ENSCAFG00845030639) THOC5 (ENSCAFG00845030679) ENSCAFG00845030707 NIPSNAP1 (ENSCAFG00845030716) NF2 (ENSCAFG00845030750) CABP7 (ENSCAFG00845030789) ASCC2 (ENSCAFG00845030795) MTMR3 (ENSCAFG00845030822) HORMAD2 (ENSCAFG00845030894) LIF (ENSCAFG00845030902) OSM (ENSCAFG00845030908) CASTOR1 (ENSCAFG00845018973) TBC1D10A (ENSCAFG00845019071) SF3A1 (ENSCAFG00845019174) CCDC157 (ENSCAFG00845019274) Dog MODERN SPECIES 31 UFC1 (ENSCAFG00845029723) USP21 (ENSCAFG00845029668) PPOX (ENSCAFG00845029591) B4GALT3 (ENSCAFG00845029537) ADAMTS4 (ENSCAFG00845029491) NDUFS2 (ENSCAFG00845029427) FCER1G (ENSCAFG00845029387) APOA2 (ENSCAFG00845029343) NR1I3 (ENSCAFG00845029218) TOMM40L (ENSCAFG00845029108) ENSCAFG00845029070 MPZ (ENSCAFG00845029003) SDHC (ENSCAFG00845028924) ENSCAFG00845028843 ENSCAFG00845028772 ENSCAFG00845028724 #22 ENSCAFG00845028677 FCRLA (ENSCAFG00845028307) FCRLB (ENSCAFG00845028077) ENSCAFG00845027945 DUSP12 (ENSCAFG00845027806) ATF6 (ENSCAFG00845027663) OLFML2B (ENSCAFG00845027557) SPATA46 (ENSCAFG00845027511) ENSCAFG00845027342 SH2D1B (ENSCAFG00845027206) ENSCAFG00845027160 UHMK1 (ENSCAFG00845027027) UAP1 (ENSCAFG00845026767) DDR2 (ENSCAFG00845026475) HSD17B7 (ENSCAFG00845026233) Dog MODERN SPECIES 23 ZNF609 (ENSCAFG00845023283) TRIP4 (ENSCAFG00845023208) PCLAF (ENSCAFG00845023122) CSNK1G1 (ENSCAFG00845022773) PPIB (ENSCAFG00845022646) ENSCAFG00845022581 SNX1 (ENSCAFG00845022186) CIAO2A (ENSCAFG00845022079) DAPK2 (ENSCAFG00845021918) HERC1 (ENSCAFG00845021555) FBXL22 (ENSCAFG00845021485) USP3 (ENSCAFG00845021124) CA12 (ENSCAFG00845020844) APH1B (ENSCAFG00845020653) #20 RAB8B (ENSCAFG00845020576) #21 RPS27L (ENSCAFG00845020453) #22 LACTB (ENSCAFG00845020386) #23 TPM1 (ENSCAFG00845019944) #24 TLN2 (ENSCAFG00845019529) #25 ENSCAFG00845019202 VPS13C (ENSCAFG00845018323) #29 ENSCAFG00845018067 RORA (ENSCAFG00845017841) ICE2 (ENSCAFG00845017491) ANXA2 (ENSCAFG00845017171) FOXB1 (ENSCAFG00845016929) BNIP2 (ENSCAFG00845016807) GTF2A2 (ENSCAFG00845016636) ENSCAFG00845016556 FAM81A (ENSCAFG00845016440) ENSCAFG00845016391 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00930000152855 ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Pecora ANCESTRAL SPECIES 6 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Yarkand deer MODERN SPECIES C11orf65 (ENSCHYG00000003029) ATM (ENSCHYG00000002993) NPAT (ENSCHYG00000002947) ENSCHYG00000002932 ACAT1 (ENSCHYG00000002805) CUL5 (ENSCHYG00000002728) RAB39A (ENSCHYG00000002676) SLC35F2 (ENSCHYG00000002643) ENSCHYG00000002623 ENSCHYG00000002615 ELMOD1 (ENSCHYG00000002579) ALKBH8 (ENSCHYG00000002526) ENSCHYG00000002507 ENSCHYG00000002498 GUCY1A2 (ENSCHYG00000002488) ENSCHYG00000002475 #22 CWF19L2 (ENSCHYG00000002441) C11orf97 (ENSCHYG00000002417) FUT4 (ENSCHYG00000002405) PIWIL4 (ENSCHYG00000002347) AMOTL1 (ENSCHYG00000002196) CWC15 (ENSCHYG00000002143) ENSCHYG00000002131 ENDOD1 (ENSCHYG00000002117) ENSCHYG00000002108 SESN3 (ENSCHYG00000002070) FAM76B (ENSCHYG00000001944) CEP57 (ENSCHYG00000001878) MTMR2 (ENSCHYG00000001840) ENSCHYG00000001826 MAML2 (ENSCHYG00000001814) Percora_a ANCESTRAL SPECIES 8 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 Siberian musk deer MODERN SPECIES 367 ZNF609 (ENSMMSG00000016094) TRIP4 (ENSMMSG00000016140) ENSMMSG00000016175 CSNK1G1 (ENSMMSG00000016321) PPIB (ENSMMSG00000016470) SNX22 (ENSMMSG00000016511) SNX1 (ENSMMSG00000016577) ENSMMSG00000016708 DAPK2 (ENSMMSG00000016817) HERC1 (ENSMMSG00000016958) FBXL22 (ENSMMSG00000017073) USP3 (ENSMMSG00000017104) CA12 (ENSMMSG00000017392) APH1B (ENSMMSG00000017507) #20 RAB8B (ENSMMSG00000017553) #21 RPS27L (ENSMMSG00000017596) #22 LACTB (ENSMMSG00000017653) #23 ENSMMSG00000017695 Bovidae ANCESTRAL SPECIES 7 ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00390000012916.y.a.b ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Bovinae ANCESTRAL SPECIES 11 ENSGT00510000048252 ENSGT00390000015789.c.b ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062.e #23 ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405.hb Bos DUPLICATION Bos ANCESTRAL SPECIES ENSGT00390000015318 ENSGT00420000029753.b ENSGT00390000006459 ENSGT00390000016650 ENSGT00940000156539 ENSGT00940000154277.a.b.b.n ENSGT00390000003464 ENSGT00940000165040 ENSGT01000000221833 ENSGT00390000007560.l ENSGT00940000163965 ENSGT00940000158765 ENSGT00940000153167.B ENSGT00510000047220 ENSGT00530000063474.A ENSGT00950000182891.a.a.a.v #22 ENSGT00940000158362 ENSGT00390000018302 ENSGT00940000159923 ENSGT00510000047486 ENSGT00940000159901 ENSGT00940000162133 ENSGT00940000162474 ENSGT00940000159121 ENSGT00940000160852 ENSGT00390000012433.a.b ENSGT00940000154046.a ENSGT00390000001593 ENSGT00390000000324.c ENSGT00390000000715 ENSGT00390000016573.d Bos_a ANCESTRAL SPECIES 1 ENSGT00390000015318 ENSGT00420000029753.b ENSGT00390000006459 ENSGT00390000016650 ENSGT00940000156539 ENSGT00940000154277.a.b.b.n ENSGT00390000003464 ENSGT00940000165040 ENSGT01000000221833 ENSGT00390000007560.l ENSGT00940000163965 ENSGT00940000158765 ENSGT00940000153167.B ENSGT00510000047220 ENSGT00530000063474.A ENSGT00950000182891.a.a.a.v #22 ENSGT00940000158362 ENSGT00390000018302 ENSGT00940000159923 ENSGT00510000047486 ENSGT00940000159901 ENSGT00940000162133 ENSGT00940000162474 ENSGT00940000159121 ENSGT00940000160852 ENSGT00390000012433.a.b ENSGT00940000154046.a ENSGT00390000001593 ENSGT00390000000324.c ENSGT00390000000715 ENSGT00390000016573.d Wild yak MODERN SPECIES 630 IPP (ENSBMUG00000017678) TMEM69 (ENSBMUG00000017619) GPBP1L1 (ENSBMUG00000017580) CCDC17 (ENSBMUG00000017536) NASP (ENSBMUG00000017479) AKR1A1 (ENSBMUG00000017439) ENSBMUG00000017429 MMACHC (ENSBMUG00000017361) CCDC163 (ENSBMUG00000017350) ENSBMUG00000017341 ENSBMUG00000017331 TESK2 (ENSBMUG00000017319) TOE1 (ENSBMUG00000017293) MUTYH (ENSBMUG00000017236) HPDL (ENSBMUG00000017150) ENSBMUG00000017138 #22 ZSWIM5 (ENSBMUG00000017121) UROD (ENSBMUG00000017080) HECTD3 (ENSBMUG00000017025) EIF2B3 (ENSBMUG00000016990) PTCH2 (ENSBMUG00000016962) BTBD19 (ENSBMUG00000016904) PLK3 (ENSBMUG00000016875) BEST4 (ENSBMUG00000016864) RPS8 (ENSBMUG00000016794) KIF2C (ENSBMUG00000016767) ENSBMUG00000016689 ENSBMUG00000016682 TMEM53 (ENSBMUG00000016676) RNF220 (ENSBMUG00000016630) ERI3 (ENSBMUG00000016591) Bos_b ANCESTRAL SPECIES 11 ENSGT00390000015789.c.b ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.a.a.b.b ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a.v #22 ENSGT00390000001062.e #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00390000012916.y.a.b ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b Hybrid Bos Indicus MODERN SPECIES 1 ENSBIXG00005003842 CSNK1G1 (ENSBIXG00005022464) SNX1 (ENSBIXG00005022359) PPIB (ENSBIXG00005003793) SNX22 (ENSBIXG00005022245) ENSBIXG00005022228 CIAO2A (ENSBIXG00005005877) DAPK2 (ENSBIXG00005022140) HERC1 (ENSBIXG00005021976) ENSBIXG00005003627 FBXL22 (ENSBIXG00005021495) USP3 (ENSBIXG00005003618) CA12 (ENSBIXG00005003586) APH1B (ENSBIXG00005021158) #20 RAB8B (ENSBIXG00005021126) #21 RPS27L (ENSBIXG00005021094) #22 ENSBIXG00005021042 #23 ENSBIXG00005021018 TPM1 (ENSBIXG00005020956) #24 ENSBIXG00005020564 TLN2 (ENSBIXG00005020508) #25 ENSBIXG00005003454 ENSBIXG00005020414 VPS13C (ENSBIXG00005020334) #29 RORA (ENSBIXG00005020235) ICE2 (ENSBIXG00005020165) ENSBIXG00005020130 ANXA2 (ENSBIXG00005020120) FOXB1 (ENSBIXG00005003289) BNIP2 (ENSBIXG00005020028) GTF2A2 (ENSBIXG00005003264) Cow MODERN SPECIES 1 SNX22 (ENSBTAG00000016821) SNX1 (ENSBTAG00000002014) CIAO2A (ENSBTAG00000002012) DAPK2 (ENSBTAG00000011820) HERC1 (ENSBTAG00000053677) ENSBTAG00000052707 ENSBTAG00000051076 ENSBTAG00000054388 ENSBTAG00000050908 ENSBTAG00000019474 FBXL22 (ENSBTAG00000008807) USP3 (ENSBTAG00000008805) CA12 (ENSBTAG00000019390) APH1B (ENSBTAG00000010641) #20 RAB8B (ENSBTAG00000011146) #21 RPS27L (ENSBTAG00000012898) #22 LACTB (ENSBTAG00000017373) #23 TPM1 (ENSBTAG00000005373) #24 ENSBTAG00000040590 TLN2 (ENSBTAG00000003667) #25 C2CD4B (ENSBTAG00000020814) ENSBTAG00000010952 VPS13C (ENSBTAG00000038920) #29 RORA (ENSBTAG00000015904) ICE2 (ENSBTAG00000005328) ANXA2 (ENSBTAG00000009615) FOXB1 (ENSBTAG00000019114) BNIP2 (ENSBTAG00000013493) GTF2A2 (ENSBTAG00000010298) GCNT3 (ENSBTAG00000009443) FAM81A (ENSBTAG00000014699) Bos ANCESTRAL SPECIES 13 ENSGT00390000015789.c.b ENSGT00940000155628 ENSGT00950000186329 ENSGT00940000158007 ENSGT00390000001280.a ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.a.a.b.b ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a.w #22 ENSGT00390000001062.e #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00390000012916.y.a.b ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b Bos_a ANCESTRAL SPECIES 53 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.a.a.b.b ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a.w #22 ENSGT00390000001062.e #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00390000012916.y.a.b ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.a.a.b.b.b Wild yak MODERN SPECIES 658 ENSBMUG00000004704 TRIP4 (ENSBMUG00000004690) PCLAF (ENSBMUG00000004667) CSNK1G1 (ENSBMUG00000004474) PPIB (ENSBMUG00000004309) SNX22 (ENSBMUG00000004300) SNX1 (ENSBMUG00000004277) CIAO2A (ENSBMUG00000004234) DAPK2 (ENSBMUG00000004177) HERC1 (ENSBMUG00000004110) FBXL22 (ENSBMUG00000004031) USP3 (ENSBMUG00000003861) CA12 (ENSBMUG00000003495) APH1B (ENSBMUG00000003435) #20 RAB8B (ENSBMUG00000003418) #21 ENSBMUG00000003407 #22 LACTB (ENSBMUG00000003387) #23 Domestic yak MODERN SPECIES 2 TRIP4 (ENSBGRG00000023426) PCLAF (ENSBGRG00000023565) CSNK1G1 (ENSBGRG00000023776) PPIB (ENSBGRG00000024663) SNX22 (ENSBGRG00000024686) ENSBGRG00000024710 SNX1 (ENSBGRG00000024722) CIAO2A (ENSBGRG00000024771) DAPK2 (ENSBGRG00000024836) HERC1 (ENSBGRG00000025007) FBXL22 (ENSBGRG00000025878) USP3 (ENSBGRG00000025898) CA12 (ENSBGRG00000026023) APH1B (ENSBGRG00000003624) #20 RAB8B (ENSBGRG00000003715) #21 ENSBGRG00000003772 #22 LACTB (ENSBGRG00000003854) #23 ENSBGRG00000003930 ENSBGRG00000003954 ENSBGRG00000003979 #24 ENSBGRG00000004293 TLN2 (ENSBGRG00000004335) #25 ENSBGRG00000004627 ENSBGRG00000004649 VPS13C (ENSBGRG00000004877) #29 ENSBGRG00000007967 RORA (ENSBGRG00000007990) ENSBGRG00000008135 ENSBGRG00000008149 ICE2 (ENSBGRG00000008178) ANXA2 (ENSBGRG00000008299) American bison DUPLICATION American bison MODERN SPECIES 1503 RAB8B (ENSBBBG00000023319) #21 RPS27L (ENSBBBG00000008412) #22 ENSBBBG00000023337 #23 ENSBBBG00000023344 TPM1 (ENSBBBG00000023420) #24 ENSBBBG00000006128 ##24 American bison MODERN SPECIES 3172 TMEM69 (ENSBBBG00000015914) GPBP1L1 (ENSBBBG00000015933) CCDC17 (ENSBBBG00000015992) NASP (ENSBBBG00000016147) AKR1A1 (ENSBBBG00000016192) ENSBBBG00000016198 PRDX1 (ENSBBBG00000016232) MMACHC (ENSBBBG00000016244) CCDC163 (ENSBBBG00000008918) ENSBBBG00000016254 ENSBBBG00000016258 TESK2 (ENSBBBG00000016294) TOE1 (ENSBBBG00000016322) MUTYH (ENSBBBG00000016504) HPDL (ENSBBBG00000004078) ENSBBBG00000016539 #22 ZSWIM5 (ENSBBBG00000004081) UROD (ENSBBBG00000016610) HECTD3 (ENSBBBG00000016625) EIF2B3 (ENSBBBG00000016683) PTCH2 (ENSBBBG00000006999) BTBD19 (ENSBBBG00000016800) DYNLT4 (ENSBBBG00000016809) PLK3 (ENSBBBG00000016833) BEST4 (ENSBBBG00000004166) RPS8 (ENSBBBG00000016874) KIF2C (ENSBBBG00000016956) ENSBBBG00000004203 ENSBBBG00000008379 TMEM53 (ENSBBBG00000004212) ENSBBBG00000017050 Caprinae ANCESTRAL SPECIES 11 ENSGT00390000015789.c.b ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00900000143658 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT00390000012916.y.a.b ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b Rambouillet Sheep MODERN SPECIES 23 OAZ2 (ENSOARG00020023813) ZNF609 (ENSOARG00020023856) TRIP4 (ENSOARG00020023887) PCLAF (ENSOARG00020023913) CSNK1G1 (ENSOARG00020024000) PPIB (ENSOARG00020024684) SNX22 (ENSOARG00020007311) SNX1 (ENSOARG00020007347) ENSOARG00020007473 DAPK2 (ENSOARG00020007501) HERC1 (ENSOARG00020007683) FBXL22 (ENSOARG00020007949) USP3 (ENSOARG00020008050) APH1B (ENSOARG00020008742) #20 RAB8B (ENSOARG00020008761) #21 RPS27L (ENSOARG00020008837) #22 LACTB (ENSOARG00020008870) #23 TPM1 (ENSOARG00020009011) #24 TLN2 (ENSOARG00020009618) #25 ENSOARG00020010758 VPS13C (ENSOARG00020011169) #29 RORA (ENSOARG00020019090) ICE2 (ENSOARG00020019537) ANXA2 (ENSOARG00020019713) FOXB1 (ENSOARG00020019859) BNIP2 (ENSOARG00020019895) GTF2A2 (ENSOARG00020019984) GCNT3 (ENSOARG00020020115) FAM81A (ENSOARG00020020134) MYO1E (ENSOARG00020020182) CCNB2 (ENSOARG00020020879) Goat MODERN SPECIES 1 PCLAF (ENSCHIG00000026661) CSNK1G1 (ENSCHIG00000011234) PPIB (ENSCHIG00000019546) SNX22 (ENSCHIG00000020098) SNX1 (ENSCHIG00000021997) ENSCHIG00000006307 DAPK2 (ENSCHIG00000002285) HERC1 (ENSCHIG00000012880) FBXL22 (ENSCHIG00000023260) ENSCHIG00000015955 USP3 (ENSCHIG00000019905) CA12 (ENSCHIG00000004709) APH1B (ENSCHIG00000019602) #20 ENSCHIG00000016246 RAB8B (ENSCHIG00000019412) #21 RPS27L (ENSCHIG00000012945) #22 LACTB (ENSCHIG00000027114) #23 ENSCHIG00000018051 TPM1 (ENSCHIG00000020204) #24 TLN2 (ENSCHIG00000021342) #25 ENSCHIG00000024274 ENSCHIG00000009551 ENSCHIG00000026417 VPS13C (ENSCHIG00000021131) #29 RORA (ENSCHIG00000025775) ICE2 (ENSCHIG00000025114) ENSCHIG00000006134 ENSCHIG00000017509 FOXB1 (ENSCHIG00000008336) BNIP2 (ENSCHIG00000025922) ENSCHIG00000004630 Cetacea ANCESTRAL SPECIES 2 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00390000015537.v.a.b.b ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.fb ENSGT00940000159331.b Blue whale MODERN SPECIES 11 ENSBMSG00010005839 PCLAF (ENSBMSG00010005857) CSNK1G1 (ENSBMSG00010005923) PPIB (ENSBMSG00010006066) SNX22 (ENSBMSG00010006090) SNX1 (ENSBMSG00010000037) ENSBMSG00010000129 DAPK2 (ENSBMSG00010000179) HERC1 (ENSBMSG00010000279) FBXL22 (ENSBMSG00010000348) USP3 (ENSBMSG00010000419) ENSBMSG00010000553 CA12 (ENSBMSG00010000588) APH1B (ENSBMSG00010000650) #20 RAB8B (ENSBMSG00010000668) #21 RPS27L (ENSBMSG00010000683) #22 LACTB (ENSBMSG00010000701) #23 TPM1 (ENSBMSG00010000776) #24 TLN2 (ENSBMSG00010001027) #25 ENSBMSG00010001086 ENSBMSG00010001099 VPS13C (ENSBMSG00010001188) #29 ENSBMSG00010001281 RORA (ENSBMSG00010001304) ICE2 (ENSBMSG00010001345) ENSBMSG00010001360 FOXB1 (ENSBMSG00010001373) BNIP2 (ENSBMSG00010001392) ENSBMSG00010001413 FAM81A (ENSBMSG00010001446) MYO1E (ENSBMSG00010001489) Odontoceti ANCESTRAL SPECIES 2 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00390000015537.v.a.b.b ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.fb ENSGT00940000159331.b Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00390000015537.v.a.b.b ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572.fb ENSGT00940000159331.b Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00390000015537.v.a.b.b ENSGT00940000153096.b.c.b.a.b.b.a.a.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000154576.s.b ENSGT00940000158531 Monodontidae ANCESTRAL SPECIES 27 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00390000016972.a.b.a.b.b.b ENSGT00940000159282 ENSGT00390000002049.c.b.n #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00390000015537.v.a.b.b ENSGT00940000153096.b.c.b.a.b.b.a.a.a ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000154576.s.b ENSGT00940000158531 Narwhal MODERN SPECIES 302 ITPRID2 (ENSMMNG00015007832) NEUROD1 (ENSMMNG00015007920) CERKL (ENSMMNG00015007966) ITGA4 (ENSMMNG00015008070) ENSMMNG00015008116 ENSMMNG00015008128 UBE2E3 (ENSMMNG00015008144) ENSMMNG00015008167 CWC22 (ENSMMNG00015008180) ZNF385B (ENSMMNG00015008221) SESTD1 (ENSMMNG00015008251) CCDC141 (ENSMMNG00015008359) ENSMMNG00015008454 TTN (ENSMMNG00015009913) PLEKHA3 (ENSMMNG00015013955) ENSMMNG00015013983 #22 FKBP7 (ENSMMNG00015013990) PJVK (ENSMMNG00015014003) PRKRA (ENSMMNG00015014019) OSBPL6 (ENSMMNG00015014111) RBM45 (ENSMMNG00015014220) ENSMMNG00015014238 PDE11A (ENSMMNG00015014260) ENSMMNG00015014296 ENSMMNG00015007201 ENSMMNG00015007232 AGPS (ENSMMNG00015007255) NFE2L2 (ENSMMNG00015007306) ENSMMNG00015007339 MTX2 (ENSMMNG00015007394) HOXD1 (ENSMMNG00015007440) Beluga whale DUPLICATION Beluga whale MODERN SPECIES 84 ITGA4 (ENSDLEG00000011455) ENSDLEG00000011418 ENSDLEG00000011407 UBE2E3 (ENSDLEG00000011372) CWC22 (ENSDLEG00000011321) ENSDLEG00000011314 ZNF385B (ENSDLEG00000011291) SESTD1 (ENSDLEG00000010966) CCDC141 (ENSDLEG00000010172) ENSDLEG00000010018 ENSDLEG00000009977 ENSDLEG00000009937 ENSDLEG00000009909 ENSDLEG00000009890 ENSDLEG00000009862 ENSDLEG00000009851 #22 PLEKHA3 (ENSDLEG00000009842) FKBP7 (ENSDLEG00000009831) PJVK (ENSDLEG00000009801) PRKRA (ENSDLEG00000009768) OSBPL6 (ENSDLEG00000009570) RBM45 (ENSDLEG00000009507) ENSDLEG00000009493 ENSDLEG00000009481 ENSDLEG00000009469 ENSDLEG00000009463 AGPS (ENSDLEG00000009335) NFE2L2 (ENSDLEG00000009266) ENSDLEG00000009227 MTX2 (ENSDLEG00000009199) HOXD1 (ENSDLEG00000009181) Beluga whale MODERN SPECIES 20 TRIP4 (ENSDLEG00000008070) PCLAF (ENSDLEG00000008054) CSNK1G1 (ENSDLEG00000007686) PPIB (ENSDLEG00000007588) SNX22 (ENSDLEG00000007576) SNX1 (ENSDLEG00000007564) FAM96A (ENSDLEG00000007545) DAPK2 (ENSDLEG00000007441) HERC1 (ENSDLEG00000007012) FBXL22 (ENSDLEG00000006969) USP3 (ENSDLEG00000006410) ENSDLEG00000006340 CA12 (ENSDLEG00000006335) APH1B (ENSDLEG00000006318) #20 RAB8B (ENSDLEG00000006295) #21 ENSDLEG00000006289 #22 LACTB (ENSDLEG00000006271) #23 ENSDLEG00000006267 #24 ENSDLEG00000006265 #24 ENSDLEG00000006262 ##24 TLN2 (ENSDLEG00000002192) #25 ENSDLEG00000001077 #26 ENSDLEG00000001065 ENSDLEG00000001038 VPS13C (ENSDLEG00000000606) #29 ENSDLEG00000000383 ENSDLEG00000000365 RORA (ENSDLEG00000000324) ICE2 (ENSDLEG00000000261) ENSDLEG00000012242 ANXA2 (ENSDLEG00000012217) Vaquita DUPLICATION Vaquita MODERN SPECIES 18 CERKL (ENSPSNG00000005590) ITGA4 (ENSPSNG00000005792) ENSPSNG00000005901 UBE2E3 (ENSPSNG00000005926) ENSPSNG00000005957 CWC22 (ENSPSNG00000006006) ZNF385B (ENSPSNG00000006076) SESTD1 (ENSPSNG00000006197) ENSPSNG00000006293 ENSPSNG00000006341 ENSPSNG00000006449 ENSPSNG00000006659 ENSPSNG00000006702 ENSPSNG00000006762 PLEKHA3 (ENSPSNG00000006784) ENSPSNG00000006805 #22 FKBP7 (ENSPSNG00000006918) PJVK (ENSPSNG00000006966) PRKRA (ENSPSNG00000007030) OSBPL6 (ENSPSNG00000007225) RBM45 (ENSPSNG00000007527) ENSPSNG00000007564 PDE11A (ENSPSNG00000007618) ENSPSNG00000007902 ENSPSNG00000005284 AGPS (ENSPSNG00000005315) NFE2L2 (ENSPSNG00000005384) ENSPSNG00000005439 MTX2 (ENSPSNG00000005488) HOXD1 (ENSPSNG00000005524) HOXD3 (ENSPSNG00000005539) Vaquita MODERN SPECIES 11 TRIP4 (ENSPSNG00000003783) PCLAF (ENSPSNG00000003831) CSNK1G1 (ENSPSNG00000003875) PPIB (ENSPSNG00000003907) ENSPSNG00000003925 SNX1 (ENSPSNG00000003988) CIAO2A (ENSPSNG00000004040) DAPK2 (ENSPSNG00000004069) HERC1 (ENSPSNG00000000120) FBXL22 (ENSPSNG00000000167) USP3 (ENSPSNG00000000231) ENSPSNG00000000353 CA12 (ENSPSNG00000000410) APH1B (ENSPSNG00000000505) #20 RAB8B (ENSPSNG00000000524) #21 ENSPSNG00000000555 #22 LACTB (ENSPSNG00000000570) #23 TPM1 (ENSPSNG00000000684) #24 TLN2 (ENSPSNG00000000901) #25 ENSPSNG00000000941 ENSPSNG00000000958 VPS13C (ENSPSNG00000001057) #29 ENSPSNG00000001268 RORA (ENSPSNG00000001296) ENSPSNG00000001324 ICE2 (ENSPSNG00000001344) ANXA2 (ENSPSNG00000001393) FOXB1 (ENSPSNG00000001422) ENSPSNG00000001436 BNIP2 (ENSPSNG00000001478) ENSPSNG00000001542 Suina ANCESTRAL SPECIES 12 ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00900000143730 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00910000147045 #26 ENSGT00940000162206.g ENSGT00930000152855 ENSGT00940000162206.h ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.j ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b Pig MODERN SPECIES CSNK1G1 (ENSSSCG00000004558) PPIB (ENSSSCG00000034137) SNX22 (ENSSSCG00000037275) SNX1 (ENSSSCG00000042703) ENSSSCG00000047502 CIAO2A (ENSSSCG00000034124) DAPK2 (ENSSSCG00000021588) HERC1 (ENSSSCG00000004561) FBXL22 (ENSSSCG00000038786) ENSSSCG00000040895 USP3 (ENSSSCG00000028737) ENSSSCG00000059505 CA12 (ENSSSCG00000004565) APH1B (ENSSSCG00000032949) #20 RAB8B (ENSSSCG00000026571) #21 RPS27L (ENSSSCG00000023158) #22 LACTB (ENSSSCG00000004569) #23 TPM1 (ENSSSCG00000004570) #24 TLN2 (ENSSSCG00000024088) #25 ENSSSCG00000046767 ENSSSCG00000055870 ENSSSCG00000004572 ENSSSCG00000035016 ENSSSCG00000004573 VPS13C (ENSSSCG00000036431) #29 RORA (ENSSSCG00000004576) ICE2 (ENSSSCG00000004577) ANXA2 (ENSSSCG00000004578) ENSSSCG00000048426 FOXB1 (ENSSSCG00000035244) BNIP2 (ENSSSCG00000004582) Chacoan peccary MODERN SPECIES 192 TRIP4 (ENSCWAG00000002078) PCLAF (ENSCWAG00000002050) CSNK1G1 (ENSCWAG00000002007) PPIB (ENSCWAG00000001979) SNX22 (ENSCWAG00000001957) SNX1 (ENSCWAG00000001903) CIAO2A (ENSCWAG00000001878) ENSCWAG00000001864 DAPK2 (ENSCWAG00000001815) HERC1 (ENSCWAG00000001772) FBXL22 (ENSCWAG00000001746) USP3 (ENSCWAG00000001654) CA12 (ENSCWAG00000001590) APH1B (ENSCWAG00000001558) #20 RAB8B (ENSCWAG00000001533) #21 RPS27L (ENSCWAG00000001510) #22 LACTB (ENSCWAG00000001493) #23 TPM1 (ENSCWAG00000001033) #24 ENSCWAG00000000960 TLN2 (ENSCWAG00000000763) #25 ENSCWAG00000000712 #26 ENSCWAG00000000707 ENSCWAG00000000701 ENSCWAG00000000689 ENSCWAG00000000676 VPS13C (ENSCWAG00000000579) #29 Atlantogenata ANCESTRAL SPECIES 2 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 Afrotheria ANCESTRAL SPECIES 58 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000158531 ENSGT00390000014572 ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 ENSGT00940000157691 ENSGT00940000156573 Afrotheria_a ANCESTRAL SPECIES 56 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000158531 ENSGT00390000014572 ENSGT00390000004985.b ENSGT00940000157461 ENSGT00940000155405 ENSGT00940000157691 ENSGT00940000156573 Elephant MODERN SPECIES 466 ZNF609 (ENSLAFG00000001465) TRIP4 (ENSLAFG00000017612) PCLAF (ENSLAFG00000017606) CSNK1G1 (ENSLAFG00000018699) PPIB (ENSLAFG00000018698) SNX22 (ENSLAFG00000018696) SNX1 (ENSLAFG00000018693) CIAO2A (ENSLAFG00000011114) DAPK2 (ENSLAFG00000000338) HERC1 (ENSLAFG00000004068) FBXL22 (ENSLAFG00000031273) USP3 (ENSLAFG00000004065) CA12 (ENSLAFG00000001773) APH1B (ENSLAFG00000001772) #20 RAB8B (ENSLAFG00000001771) #21 RPS27L (ENSLAFG00000015475) #22 LACTB (ENSLAFG00000015480) #23 TPM1 (ENSLAFG00000004960) #24 TLN2 (ENSLAFG00000000520) #25 ENSLAFG00000013413 ENSLAFG00000027908 #29 ENSLAFG00000012810 #29 RORA (ENSLAFG00000000577) ICE2 (ENSLAFG00000017637) ANXA2 (ENSLAFG00000011404) BNIP2 (ENSLAFG00000014187) GTF2A2 (ENSLAFG00000010773) FAM81A (ENSLAFG00000014758) MYO1E (ENSLAFG00000004825) CCNB2 (ENSLAFG00000004822) RNF111 (ENSLAFG00000004816) Xenarthra ANCESTRAL SPECIES 734 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 Armadillo MODERN SPECIES 2681 APH1B (ENSDNOG00000039993) #20 ENSDNOG00000023965 #21 RPS27L (ENSDNOG00000048487) #22 LACTB (ENSDNOG00000045914) #23 TPM1 (ENSDNOG00000044997) #24 TLN2 (ENSDNOG00000000965) #25 ENSDNOG00000043648 ENSDNOG00000038441 Marsupialia ANCESTRAL SPECIES ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.g ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Opossum MODERN SPECIES TRIP4 (ENSMODG00000010743) PCLAF (ENSMODG00000037309) CSNK1G1 (ENSMODG00000010802) PPIB (ENSMODG00000010819) SNX22 (ENSMODG00000010831) SNX1 (ENSMODG00000010898) CIAO2A (ENSMODG00000010909) DAPK2 (ENSMODG00000010926) HERC1 (ENSMODG00000010971) FBXL22 (ENSMODG00000046180) USP3 (ENSMODG00000011011) CA12 (ENSMODG00000011032) APH1B (ENSMODG00000038735) #20 RAB8B (ENSMODG00000011048) #21 ENSMODG00000011078 RPS27L (ENSMODG00000042701) #22 LACTB (ENSMODG00000011098) #23 TPM1 (ENSMODG00000039857) #24 TLN2 (ENSMODG00000011273) #25 ENSMODG00000011283 ENSMODG00000049046 ENSMODG00000024628 VPS13C (ENSMODG00000011326) #29 RORA (ENSMODG00000011532) ICE2 (ENSMODG00000011568) ANXA2 (ENSMODG00000011604) FOXB1 (ENSMODG00000024647) ENSMODG00000049423 BNIP2 (ENSMODG00000011629) GTF2A2 (ENSMODG00000011636) GCNT3 (ENSMODG00000024649) Marsupialia_b ANCESTRAL SPECIES ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.g ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Tasmanian devil MODERN SPECIES 1 TRIP4 (ENSSHAG00000000040) PCLAF (ENSSHAG00000030585) CSNK1G1 (ENSSHAG00000018581) PPIB (ENSSHAG00000024480) SNX22 (ENSSHAG00000018564) SNX1 (ENSSHAG00000018508) CIAO2A (ENSSHAG00000023450) DAPK2 (ENSSHAG00000018240) HERC1 (ENSSHAG00000017933) FBXL22 (ENSSHAG00000020700) USP3 (ENSSHAG00000023305) ENSSHAG00000022554 CA12 (ENSSHAG00000017499) APH1B (ENSSHAG00000029286) #20 RAB8B (ENSSHAG00000024710) #21 ENSSHAG00000022073 #22 LACTB (ENSSHAG00000017142) #23 TPM1 (ENSSHAG00000020913) #24 TLN2 (ENSSHAG00000015834) #25 ENSSHAG00000025298 ENSSHAG00000022906 VPS13C (ENSSHAG00000012649) #29 RORA (ENSSHAG00000015734) ENSSHAG00000027451 ICE2 (ENSSHAG00000015473) ANXA2 (ENSSHAG00000015232) FOXB1 (ENSSHAG00000029618) BNIP2 (ENSSHAG00000012090) GTF2A2 (ENSSHAG00000031153) ENSSHAG00000011674 ENSSHAG00000026327 Diprotodontia ANCESTRAL SPECIES ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.g ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00390000008748.b ENSGT00390000005300 ENSGT00510000048252.a.a.a ENSGT00940000155628 ENSGT00940000158007 ENSGT00390000001280.a ENSGT00940000155889 ENSGT00390000017697.a ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257.g ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Common wonbat MODERN SPECIES 581 TRIP4 (ENSVURG00010016411) ENSVURG00010016398 ENSVURG00010016389 ENSVURG00010016372 PPIB (ENSVURG00010016362) ENSVURG00010016350 SNX1 (ENSVURG00010016300) CIAO2A (ENSVURG00010016275) DAPK2 (ENSVURG00010016252) HERC1 (ENSVURG00010016220) FBXL22 (ENSVURG00010016203) USP3 (ENSVURG00010016157) CA12 (ENSVURG00010016134) APH1B (ENSVURG00010016112) #20 RAB8B (ENSVURG00010016099) #21 ENSVURG00010016082 #22 LACTB (ENSVURG00010016066) #23 TPM1 (ENSVURG00010015990) #24 TLN2 (ENSVURG00010015950) #25 ENSVURG00010015922 ENSVURG00010015913 VPS13C (ENSVURG00010015870) #29 RORA (ENSVURG00010015835) ENSVURG00010015814 ICE2 (ENSVURG00010015808) ENSVURG00010015777 FOXB1 (ENSVURG00010015763) BNIP2 (ENSVURG00010015734) GTF2A2 (ENSVURG00010015706) GCNT3 (ENSVURG00010015692) OTUD7A (ENSVURG00010015679) koala MODERN SPECIES 183 CA12 (ENSPCIG00000003761) APH1B (ENSPCIG00000003765) #20 RAB8B (ENSPCIG00000003767) #21 ENSPCIG00000032134 #22 LACTB (ENSPCIG00000003775) #23 TPM1 (ENSPCIG00000003784) #24 TLN2 (ENSPCIG00000002281) #25 ENSPCIG00000033264 #25 ENSPCIG00000032015 VPS13C (ENSPCIG00000017458) #29 ENSPCIG00000025908 RORA (ENSPCIG00000013544) ICE2 (ENSPCIG00000013541) ENSPCIG00000013536 FOXB1 (ENSPCIG00000013532) BNIP2 (ENSPCIG00000023082) GTF2A2 (ENSPCIG00000033224) GCNT3 (ENSPCIG00000004630) OTUD7A (ENSPCIG00000001985) Wallaby MODERN SPECIES 14792 RPS27L (ENSMEUG00000009867) #22 Platypus MODERN SPECIES 16 TRIP4 (ENSOANG00000013357) ENSOANG00000013356 CSNK1G1 (ENSOANG00000013355) PPIB (ENSOANG00000013354) ENSOANG00000041082 SNX1 (ENSOANG00000020925) CIAO2A (ENSOANG00000009232) DAPK2 (ENSOANG00000048356) HERC1 (ENSOANG00000011146) FBXL22 (ENSOANG00000049762) USP3 (ENSOANG00000011148) ENSOANG00000039721 CA12 (ENSOANG00000041610) APH1B (ENSOANG00000011151) #20 RAB8B (ENSOANG00000011153) #21 RPS27L (ENSOANG00000041300) #22 LACTB (ENSOANG00000014411) #23 TPM1 (ENSOANG00000011217) #24 TLN2 (ENSOANG00000002149) #25 VPS13C (ENSOANG00000002874) #29 RORA (ENSOANG00000012345) ICE2 (ENSOANG00000012343) ANXA2 (ENSOANG00000012341) ENSOANG00000048817 BNIP2 (ENSOANG00000003500) GTF2A2 (ENSOANG00000013776) GCNT3 (ENSOANG00000006004) OTUD7A (ENSOANG00000011103) KLF13 (ENSOANG00000044436) TRPM1 (ENSOANG00000010363) MTMR10 (ENSOANG00000010364) Sauria ANCESTRAL SPECIES 10 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT01030000234542.b.a.a.b.a.b ##24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Lepidosauria ANCESTRAL SPECIES 46 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 tuatara MODERN SPECIES 331 CRABP1 (ENSSPUG00000014788) SKIC8 (ENSSPUG00000014807) ENSSPUG00000014814 ENSSPUG00000014822 ACSBG1 (ENSSPUG00000014841) IDH3A (ENSSPUG00000014874) CIB2 (ENSSPUG00000014888) TBC1D2B (ENSSPUG00000014911) DAPK2 (ENSSPUG00000014936) HERC1 (ENSSPUG00000014972) FBXL22 (ENSSPUG00000015067) USP3 (ENSSPUG00000015076) CA12 (ENSSPUG00000015156) APH1B (ENSSPUG00000015282) #20 RAB8B (ENSSPUG00000015339) #21 RPS27L (ENSSPUG00000015351) #22 ENSSPUG00000015357 #23 TPM1 (ENSSPUG00000015433) #24 Episquamata ANCESTRAL SPECIES 9 ENSGT00940000157602 ENSGT00940000160579 ENSGT00390000016607.a ENSGT00940000156573 ENSGT00940000157691 ENSGT00940000155405 ENSGT00940000157461 ENSGT00390000004985.b ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00980000199886 Laterata ANCESTRAL SPECIES 33 ENSGT00940000160579 ENSGT00390000016607.a ENSGT00940000156573 ENSGT00940000157691 ENSGT00940000155405 ENSGT00940000157461 ENSGT00390000004985.b ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Common wall lizard MODERN SPECIES 5 LIPC (ENSPMRG00000023441) ADAM10 (ENSPMRG00000023435) MINDY2 (ENSPMRG00000023430) SLTM (ENSPMRG00000023425) RNF111 (ENSPMRG00000023421) CCNB2 (ENSPMRG00000023416) MYO1E (ENSPMRG00000023361) FAM81A (ENSPMRG00000023319) TBC1D2B (ENSPMRG00000023313) DAPK2 (ENSPMRG00000023290) HERC1 (ENSPMRG00000023186) FBXL22 (ENSPMRG00000023165) USP3 (ENSPMRG00000023033) CA12 (ENSPMRG00000022998) RAB8B (ENSPMRG00000022969) #21 RPS27L (ENSPMRG00000022964) #22 LACTB (ENSPMRG00000022956) #23 TPM1 (ENSPMRG00000022870) #24 TLN2 (ENSPMRG00000022537) #25 ENSPMRG00000022445 VPS13C (ENSPMRG00000021841) #29 RORA (ENSPMRG00000021742) ICE2 (ENSPMRG00000021730) ANXA2 (ENSPMRG00000021720) FOXB1 (ENSPMRG00000021714) BNIP2 (ENSPMRG00000021671) GTF2A2 (ENSPMRG00000021660) GCNT3 (ENSPMRG00000021658) ENSPMRG00000021656 OTUD7A (ENSPMRG00000021652) KLF13 (ENSPMRG00000021647) Archelosauria ANCESTRAL SPECIES 13 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000181447 ENSGT00940000158999 Cryptodira ANCESTRAL SPECIES 13 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.s ENSGT00940000162206.t ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000181447 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00950000183083.a.d.a.fb #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 Testudinidae ANCESTRAL SPECIES 3 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206.s ENSGT00940000162206.t ENSGT00950000183083.a.d.a.fb #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 Goode s thornscrub tortoise MODERN SPECIES 1 SKIC8 (ENSGEVG00005018418) ENSGEVG00005018398 ENSGEVG00005018374 ENSGEVG00005018350 ENSGEVG00005018311 IDH3A (ENSGEVG00005018290) CIB2 (ENSGEVG00005018271) TBC1D2B (ENSGEVG00005018245) DAPK2 (ENSGEVG00005018176) HERC1 (ENSGEVG00005018107) FBXL22 (ENSGEVG00005018061) USP3 (ENSGEVG00005018026) CA12 (ENSGEVG00005017906) APH1B (ENSGEVG00005017830) #20 RAB8B (ENSGEVG00005017807) #21 RPS27L (ENSGEVG00005017792) #22 LACTB (ENSGEVG00005017734) #23 TPM1 (ENSGEVG00005017686) #24 TLN2 (ENSGEVG00005017009) #25 ENSGEVG00005016846 ENSGEVG00005016829 VPS13C (ENSGEVG00005010110) #29 ENSGEVG00005009244 ICE2 (ENSGEVG00005009113) ANXA2 (ENSGEVG00005009073) FOXB1 (ENSGEVG00005009058) BNIP2 (ENSGEVG00005009019) GTF2A2 (ENSGEVG00005008992) GCNT3 (ENSGEVG00005008941) OTUD7A (ENSGEVG00005008869) KLF13 (ENSGEVG00005008850) Abingdon island giant tortoise MODERN SPECIES 2515 HERC1 (ENSCABG00000004577) FBXL22 (ENSCABG00000004554) USP3 (ENSCABG00000004459) CA12 (ENSCABG00000004433) APH1B (ENSCABG00000003967) #20 RAB8B (ENSCABG00000003940) #21 RPS27L (ENSCABG00000003938) #22 LACTB (ENSCABG00000003933) #23 TPM1 (ENSCABG00000003930) #24 ENSCABG00000003924 ##24 Emydidae ANCESTRAL SPECIES 38 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000169460 ENSGT00940000159282 ENSGT00390000002049.c.b #20 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00950000183083.a.d.a.fb #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000181447 ENSGT00940000158999 ENSGT00940000161911 painted turtle MODERN SPECIES 2410 HERC1 (ENSCPBG00000017872) FBXL22 (ENSCPBG00000017831) USP3 (ENSCPBG00000017826) ENSCPBG00000017821 CA12 (ENSCPBG00000017817) APH1B (ENSCPBG00000017813) #20 RAB8B (ENSCPBG00000017809) #21 RPS27L (ENSCPBG00000017807) #22 LACTB (ENSCPBG00000017803) #23 TPM1 (ENSCPBG00000017785) #24 ENSCPBG00000017759 TLN2 (ENSCPBG00000017671) #25 ENSCPBG00000017659 VPS13C (ENSCPBG00000017250) #29 ENSCPBG00000017154 RORA (ENSCPBG00000017149) ICE2 (ENSCPBG00000017146) ANXA2 (ENSCPBG00000017143) FOXB1 (ENSCPBG00000017142) BNIP2 (ENSCPBG00000017141) GTF2A2 (ENSCPBG00000017140) GCNT3 (ENSCPBG00000017139) ENSCPBG00000017137 Three-toed box turtle MODERN SPECIES 27 ENSTMTG00000020946 ENSTMTG00000020949 ACSBG1 (ENSTMTG00000020961) IDH3A (ENSTMTG00000009869) ENSTMTG00000009885 CIB2 (ENSTMTG00000009897) TBC1D2B (ENSTMTG00000009907) DAPK2 (ENSTMTG00000009934) HERC1 (ENSTMTG00000010023) FBXL22 (ENSTMTG00000010173) USP3 (ENSTMTG00000010197) ENSTMTG00000010223 CA12 (ENSTMTG00000010244) APH1B (ENSTMTG00000010353) #20 RAB8B (ENSTMTG00000010364) #21 RPS27L (ENSTMTG00000010399) #22 LACTB (ENSTMTG00000010420) #23 TPM1 (ENSTMTG00000010444) #24 TLN2 (ENSTMTG00000011634) #25 ENSTMTG00000021849 ENSTMTG00000021853 VPS13C (ENSTMTG00000021931) #29 ENSTMTG00000022173 RORA (ENSTMTG00000022179) ICE2 (ENSTMTG00000022190) ANXA2 (ENSTMTG00000022198) FOXB1 (ENSTMTG00000022204) ENSTMTG00000022208 BNIP2 (ENSTMTG00000022215) GCNT3 (ENSTMTG00000022223) OTUD7A (ENSTMTG00000022228) Archosauria ANCESTRAL SPECIES 9 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00960000191044 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000181447 ENSGT00940000158999 Aves ANCESTRAL SPECIES 14 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000181447 ENSGT00940000158999 Neognathae ANCESTRAL SPECIES 11 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 Galloanserae ANCESTRAL SPECIES 10 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Anatidae ANCESTRAL SPECIES 23 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Pink-footed goose MODERN SPECIES 21 IREB2 (ENSABRG00000004744) CRABP1 (ENSABRG00000005068) SKIC8 (ENSABRG00000005080) DNAJA4 (ENSABRG00000005135) ACSBG1 (ENSABRG00000005214) IDH3A (ENSABRG00000005977) CIB2 (ENSABRG00000006140) TBC1D2B (ENSABRG00000006143) DAPK2 (ENSABRG00000006287) HERC1 (ENSABRG00000006427) FBXL22 (ENSABRG00000007146) ENSABRG00000007151 USP3 (ENSABRG00000007213) CA12 (ENSABRG00000009150) RAB8B (ENSABRG00000009524) #21 RPS27L (ENSABRG00000009884) #22 LACTB (ENSABRG00000009891) #23 TPM1 (ENSABRG00000010002) #24 TLN2 (ENSABRG00000010667) #25 ENSABRG00000011819 ENSABRG00000011828 VPS13C (ENSABRG00000012214) #29 ENSABRG00000015111 RORA (ENSABRG00000015129) ICE2 (ENSABRG00000015132) ANXA2 (ENSABRG00000015138) FOXB1 (ENSABRG00000015143) BNIP2 (ENSABRG00000015153) GTF2A2 (ENSABRG00000015158) GCNT3 (ENSABRG00000015163) OTUD7A (ENSABRG00000015174) Duck MODERN SPECIES 2 CRABP1 (ENSAPLG00000000615) SKIC8 (ENSAPLG00000000756) DNAJA4 (ENSAPLG00000001467) ACSBG1 (ENSAPLG00000001656) IDH3A (ENSAPLG00000001906) CIB2 (ENSAPLG00000030437) TBC1D2B (ENSAPLG00000002740) DAPK2 (ENSAPLG00000002776) HERC1 (ENSAPLG00000002872) ENSAPLG00000030490 FBXL22 (ENSAPLG00000003321) ENSAPLG00000003323 ENSAPLG00000023215 CA12 (ENSAPLG00000003479) RAB8B (ENSAPLG00000003603) #21 RPS27L (ENSAPLG00000003604) #22 LACTB (ENSAPLG00000003635) #23 TPM1 (ENSAPLG00000003656) #24 TLN2 (ENSAPLG00000004060) #25 ENSAPLG00000004983 VPS13C (ENSAPLG00000004988) #29 RORA (ENSAPLG00000005866) ENSAPLG00000024368 ICE2 (ENSAPLG00000005981) ANXA2 (ENSAPLG00000006103) FOXB1 (ENSAPLG00000028441) BNIP2 (ENSAPLG00000006267) GTF2A2 (ENSAPLG00000006577) GCNT3 (ENSAPLG00000025980) OTUD7A (ENSAPLG00000006607) KLF13 (ENSAPLG00000006681) Phasianidae ANCESTRAL SPECIES 11 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380.g ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Phasianidae_b ANCESTRAL SPECIES 11 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380.g ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 ENSGT00940000155024 Chicken MODERN SPECIES 1 PSMA4 (ENSGALG00010024195) IREB2 (ENSGALG00010024201) CRABP1 (ENSGALG00010024214) WDR61 (ENSGALG00010024240) DNAJA4 (ENSGALG00010024258) ACSBG1 (ENSGALG00010024274) IDH3A (ENSGALG00010024322) CIB2 (ENSGALG00010024377) TBC1D2B (ENSGALG00010024391) DAPK2 (ENSGALG00010024421) HERC1 (ENSGALG00010024437) FBXL22 (ENSGALG00010024463) USP3 (ENSGALG00010024482) CA12 (ENSGALG00010024499) RAB8B (ENSGALG00010024506) #21 RPS27L (ENSGALG00010024508) #22 LACTB (ENSGALG00010024517) #23 TPM1 (ENSGALG00010024570) #24 TLN2 (ENSGALG00010024582) #25 C2CD4A (ENSGALG00010024601) VPS13C (ENSGALG00010024618) #29 RORA (ENSGALG00010024646) ICE2 (ENSGALG00010024663) ANXA2 (ENSGALG00010024693) FOXB1 (ENSGALG00010024704) BNIP2 (ENSGALG00010024708) GTF2A2 (ENSGALG00010024716) GCNT3 (ENSGALG00010024725) OTUD7A (ENSGALG00010024735) KLF13 (ENSGALG00010024744) TRPM1 (ENSGALG00010024748) Turkey MODERN SPECIES 3 ENSMGAG00000004652 ENSMGAG00000021401 ENSMGAG00000004646 ENSMGAG00000004603 ENSMGAG00000004598 ENSMGAG00000004536 ENSMGAG00000021342 ENSMGAG00000004508 ENSMGAG00000004471 ENSMGAG00000017941 ENSMGAG00000004364 #29 ENSMGAG00000018001 ENSMGAG00000004247 #25 ENSMGAG00000017595 ##24 ENSMGAG00000004207 #24 ENSMGAG00000016121 #22 ENSMGAG00000004190 #23 ENSMGAG00000020980 RAB8B (ENSMGAG00000004169) #21 ENSMGAG00000004066 ENSMGAG00000004108 ENSMGAG00000022596 ENSMGAG00000018217 ENSMGAG00000016858 ENSMGAG00000004006 ENSMGAG00000003962 ENSMGAG00000003929 ENSMGAG00000003899 ENSMGAG00000003806 ENSMGAG00000003861 ENSMGAG00000018857 Japanese quail DUPLICATION Japanese quail MODERN SPECIES 1 IREB2 (ENSCJPG00005008054) CRABP1 (ENSCJPG00005008058) SKIC8 (ENSCJPG00005008060) DNAJA4 (ENSCJPG00005008062) ACSBG1 (ENSCJPG00005008071) IDH3A (ENSCJPG00005008236) CIB2 (ENSCJPG00005008238) TBC1D2B (ENSCJPG00005008241) DAPK2 (ENSCJPG00005008242) HERC1 (ENSCJPG00005008260) FBXL22 (ENSCJPG00005008939) USP3 (ENSCJPG00005008940) CA12 (ENSCJPG00005008941) ENSCJPG00005008942 RAB8B (ENSCJPG00005008943) #21 ENSCJPG00005008944 #22 LACTB (ENSCJPG00005008945) #23 TPM1 (ENSCJPG00005008946) #24 TLN2 (ENSCJPG00005008947) #25 ENSCJPG00005012617 ENSCJPG00005012618 #29 ENSCJPG00005012673 #29 ENSCJPG00005012676 ENSCJPG00005012677 ENSCJPG00005012678 RORA (ENSCJPG00005012679) ICE2 (ENSCJPG00005012681) ANXA2 (ENSCJPG00005012682) ENSCJPG00005012683 BNIP2 (ENSCJPG00005012687) GTF2A2 (ENSCJPG00005012688) Japanese quail MODERN SPECIES 17 ENSCJPG00005015085 KHDC4 (ENSCJPG00005015082) RIT1 (ENSCJPG00005015081) SYT11 (ENSCJPG00005015080) ENSCJPG00005014240 MSTO1 (ENSCJPG00005014239) DAP3 (ENSCJPG00005014238) ASH1L (ENSCJPG00005014237) ENSCJPG00005014235 ENSCJPG00005014231 ENSCJPG00005014222 CLK2 (ENSCJPG00005014221) ENSCJPG00005014220 ENSCJPG00005014219 JTB (ENSCJPG00005014218) ENSCJPG00005014217 #22 NUP210L (ENSCJPG00005014216) TPM3 (ENSCJPG00005014215) ##24 C1orf43 (ENSCJPG00005014214) UBAP2L (ENSCJPG00005014213) ATP8B2 (ENSCJPG00005014206) IL6R (ENSCJPG00005014205) SHE (ENSCJPG00005014195) UBE2Q1 (ENSCJPG00005014194) CHRNB2 (ENSCJPG00005014193) ADAR (ENSCJPG00005014192) KCNN3 (ENSCJPG00005014190) PMVK (ENSCJPG00005014189) ENSCJPG00005014188 PYGO2 (ENSCJPG00005014187) SHC1 (ENSCJPG00005014186) Neognathae_b ANCESTRAL SPECIES 13 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 Neognathae_c ANCESTRAL SPECIES 15 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000157737.l ENSGT00940000153424.a.a.c.b ENSGT00940000157737.k ENSGT00940000153424.a.a.d ENSGT00940000155907.b ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000159282 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Golden eagle MODERN SPECIES 21 IREB2 (ENSACCG00020001566) CRABP1 (ENSACCG00020001587) SKIC8 (ENSACCG00020001601) DNAJA4 (ENSACCG00020001628) ACSBG1 (ENSACCG00020001644) IDH3A (ENSACCG00020001671) CIB2 (ENSACCG00020001701) ENSACCG00020001712 ENSACCG00020001722 DAPK2 (ENSACCG00020001767) HERC1 (ENSACCG00020001827) FBXL22 (ENSACCG00020001892) USP3 (ENSACCG00020001910) CA12 (ENSACCG00020001934) RAB8B (ENSACCG00020001969) #21 RPS27L (ENSACCG00020002006) #22 LACTB (ENSACCG00020002024) #23 TPM1 (ENSACCG00020002124) #24 TLN2 (ENSACCG00020002284) #25 ENSACCG00020002386 VPS13C (ENSACCG00020003550) #29 RORA (ENSACCG00020004236) ICE2 (ENSACCG00020004246) ANXA2 (ENSACCG00020004261) FOXB1 (ENSACCG00020004266) BNIP2 (ENSACCG00020004276) GTF2A2 (ENSACCG00020004287) GCNT3 (ENSACCG00020004293) OTUD7A (ENSACCG00020004306) KLF13 (ENSACCG00020004318) TRPM1 (ENSACCG00020004421) Kakapo MODERN SPECIES 1 IREB2 (ENSSHBG00005017807) CRABP1 (ENSSHBG00005017797) SKIC8 (ENSSHBG00005017787) DNAJA4 (ENSSHBG00005017781) ACSBG1 (ENSSHBG00005017770) IDH3A (ENSSHBG00005017761) CIB2 (ENSSHBG00005017753) TBC1D2B (ENSSHBG00005017738) DAPK2 (ENSSHBG00005017733) HERC1 (ENSSHBG00005017691) FBXL22 (ENSSHBG00005017653) CA12 (ENSSHBG00005017625) USP3 (ENSSHBG00005017610) RAB8B (ENSSHBG00005017591) #21 ENSSHBG00005017596 #21 RPS27L (ENSSHBG00005017587) #22 LACTB (ENSSHBG00005017583) #23 TPM1 (ENSSHBG00005017566) #24 TLN2 (ENSSHBG00005015587) #25 ENSSHBG00005015405 VPS13C (ENSSHBG00005012548) #29 RORA (ENSSHBG00005010586) ENSSHBG00005010361 ICE2 (ENSSHBG00005010337) ANXA2 (ENSSHBG00005010321) FOXB1 (ENSSHBG00005010273) BNIP2 (ENSSHBG00005000936) GTF2A2 (ENSSHBG00005020522) GCNT3 (ENSSHBG00005020519) OTUD7A (ENSSHBG00005020517) KLF13 (ENSSHBG00005020514) Passeriformes ANCESTRAL SPECIES 12 ENSGT00940000158086 ENSGT00550000074781 ENSGT00940000160291 ENSGT00390000008240.k ENSGT00390000008240.l ENSGT00940000154470.b ENSGT00390000015600.c.a ENSGT00940000158357 ENSGT00390000018044.a ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00960000192402 ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 Great tit MODERN SPECIES 1 RBPMS2 (ENSPMJG00000007255) SORD (ENSPMJG00000007244) DUOX2 (ENSPMJG00000007237) ENSPMJG00000007236 ENSPMJG00000007231 ENSPMJG00000007230 SEC11A (ENSPMJG00000007229) ZNF592 (ENSPMJG00000007227) ENSPMJG00000007204 ALPK3 (ENSPMJG00000007184) ENSPMJG00000007181 ENSPMJG00000007178 SHF (ENSPMJG00000007177) ENSPMJG00000007176 RAB8B (ENSPMJG00000007175) #21 RPS27L (ENSPMJG00000007174) #22 LACTB (ENSPMJG00000007173) #23 Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00940000157725 ENSGT00940000158086 ENSGT00550000074781 ENSGT00940000160291 ENSGT00390000008240.k ENSGT00390000008240.l ENSGT00940000154470.b ENSGT00390000015600.c.a ENSGT00940000158357 ENSGT00390000018044.a ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT01010000223714 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 Flycatcher MODERN SPECIES 1 ZNF609 (ENSFALG00000009819) OAZ2 (ENSFALG00000009823) SORD (ENSFALG00000009847) ENSFALG00000009862 DUOXA2 (ENSFALG00000023603) ENSFALG00000009896 ENSFALG00000009902 ENSFALG00000029080 ENSFALG00000009916 ENSFALG00000009927 ENSFALG00000009937 ENSFALG00000009958 ENSFALG00000009980 ENSFALG00000009983 ENSFALG00000009988 #21 ENSFALG00000028967 #22 SNAPC5 (ENSFALG00000025446) MAP2K1 (ENSFALG00000028438) TIPIN (ENSFALG00000010027) DIS3L (ENSFALG00000010033) MEGF11 (ENSFALG00000010040) RAB11A (ENSFALG00000010052) DENND4A (ENSFALG00000010056) SLC24A1 (ENSFALG00000010063) INTS14 (ENSFALG00000010068) HACD3 (ENSFALG00000010085) DPP8 (ENSFALG00000010098) IGDCC4 (ENSFALG00000010102) IGDCC3 (ENSFALG00000010105) PARP16 (ENSFALG00000010108) ENSFALG00000010114 Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00940000158086 ENSGT00550000074781 ENSGT00940000160291 ENSGT00390000008240.k.b ENSGT00390000008240.k.a ENSGT00390000008240.l ENSGT00940000154470.b ENSGT00390000015600.c.a ENSGT00940000158357 ENSGT00390000018044.a ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Medium ground finch MODERN SPECIES 101 OAZ2 (ENSGFOG00000000113) RBPMS2 (ENSGFOG00000009914) SORD (ENSGFOG00000009907) DUOX2 (ENSGFOG00000009867) ENSGFOG00000009853 ENSGFOG00000009820 ENSGFOG00000009810 ENSGFOG00000009804 SEC11A (ENSGFOG00000009799) ZNF592 (ENSGFOG00000009788) ENSGFOG00000009778 ALPK3 (ENSGFOG00000009761) ENSGFOG00000009743 SHF (ENSGFOG00000009720) RAB8B (ENSGFOG00000009702) #21 RPS27L (ENSGFOG00000009690) #22 LACTB (ENSGFOG00000009685) #23 TPM1 (ENSGFOG00000009675) #24 TLN2 (ENSGFOG00000009635) #25 ENSGFOG00000009623 VPS13C (ENSGFOG00000009086) #29 RORA (ENSGFOG00000009037) ICE2 (ENSGFOG00000009022) ANXA2 (ENSGFOG00000009012) FOXB1 (ENSGFOG00000009007) BNIP2 (ENSGFOG00000008998) GTF2A2 (ENSGFOG00000008994) GCNT3 (ENSGFOG00000008989) OTUD7A (ENSGFOG00000008982) KLF13 (ENSGFOG00000008977) Passeroidea ANCESTRAL SPECIES 12 ENSGT00940000158086 ENSGT00550000074781 ENSGT00940000160291 ENSGT00390000008240.k.b ENSGT00390000008240.k.a ENSGT00390000008240.l ENSGT00940000154470.b ENSGT00390000015600.c.a ENSGT00940000158357 ENSGT00390000018044.a ENSGT00940000158534.d ENSGT00390000016025.b ENSGT00940000159452 ENSGT00390000014845 ENSGT00940000155363 #21 ENSGT00950000182891.a.a.a #22 ENSGT00390000001062 #23 ENSGT01030000234542.b.a.a.b.a.a #24 ENSGT00940000154699 #25 ENSGT00940000162206 ENSGT00950000183083.a.d.a #29 ENSGT00960000187698 ENSGT00940000157387 ENSGT00390000006883 ENSGT00940000154257 ENSGT00940000160522 ENSGT00940000158531 ENSGT00390000014572 ENSGT00940000159331.b ENSGT00940000158999 ENSGT00940000161911 Zebra finch MODERN SPECIES 1 OAZ2 (ENSTGUG00000004712) RBPMS2 (ENSTGUG00000004722) SORD (ENSTGUG00000004734) DUOX2 (ENSTGUG00000004765) ENSTGUG00000004837 ENSTGUG00000004846 NMB (ENSTGUG00000004854) SEC11A (ENSTGUG00000014189) ZNF592 (ENSTGUG00000004860) ENSTGUG00000019329 ALPK3 (ENSTGUG00000004879) ENSTGUG00000004884 SHF (ENSTGUG00000004965) ENSTGUG00000004957 RAB8B (ENSTGUG00000026889) #21 RPS27L (ENSTGUG00000026454) #22 LACTB (ENSTGUG00000004991) #23 TPM1 (ENSTGUG00000005002) #24 TLN2 (ENSTGUG00000005039) #25 ENSTGUG00000005224 VPS13C (ENSTGUG00000005229) #29 RORA (ENSTGUG00000005333) ICE2 (ENSTGUG00000005359) ANXA2 (ENSTGUG00000005370) FOXB1 (ENSTGUG00000005409) GTF2A2 (ENSTGUG00000005412) GCNT3 (ENSTGUG00000005442) OTUD7A (ENSTGUG00000005449) KLF13 (ENSTGUG00000028647) TRPM1 (ENSTGUG00000005474) MTMR10 (ENSTGUG00000005555) Common canary DUPLICATION Common canary MODERN SPECIES 12 SORD (ENSSCAG00000016323) DUOX2 (ENSSCAG00000016330) ENSSCAG00000016336 ENSSCAG00000016339 ENSSCAG00000016340 ENSSCAG00000016343 SEC11A (ENSSCAG00000016345) ZNF592 (ENSSCAG00000016347) ENSSCAG00000016350 ALPK3 (ENSSCAG00000016357) ENSSCAG00000016364 SHF (ENSSCAG00000016366) ENSSCAG00000016368 RAB8B (ENSSCAG00000016372) #21 ENSSCAG00000016374 #21 ENSSCAG00000016377 #22 LACTB (ENSSCAG00000016380) #23 TPM1 (ENSSCAG00000016386) #24 TLN2 (ENSSCAG00000016408) #25 ENSSCAG00000016429 ENSSCAG00000016431 #29 ENSSCAG00000016442 #29 ENSSCAG00000016449 RORA (ENSSCAG00000016454) ICE2 (ENSSCAG00000016457) ANXA2 (ENSSCAG00000016458) FOXB1 (ENSSCAG00000016460) BNIP2 (ENSSCAG00000016462) GTF2A2 (ENSSCAG00000016468) GCNT3 (ENSSCAG00000016472) OTUD7A (ENSSCAG00000016480) Common canary MODERN SPECIES 836 ENSSCAG00000002425 #22