Neopterygii ANCESTRAL SPECIES 29 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 ENSGT00390000015968 ENSGT00600000084428.b ENSGT00940000154572 ENSGT00940000157710 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 ENSGT00950000182976.a.a ENSGT00880000138031 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 Osteoglossocephalai ANCESTRAL SPECIES 144 ENSGT00530000063722.a ENSGT00390000001810.b ENSGT00390000004708 ENSGT00940000155166.A ENSGT00390000016813 ENSGT00940000155118 ENSGT00940000155067.a ENSGT00940000155067.b.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00390000014084 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984 ENSGT00940000159081 #26 ENSGT00530000064100 ENSGT00390000006349 Clupeocephala ANCESTRAL SPECIES 100 ENSGT00390000004708 ENSGT00390000001810.b ENSGT00940000155166.A ENSGT00940000155118 ENSGT00390000016813 ENSGT00900000143486 ENSGT00940000155067.a ENSGT00940000155067.b.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00390000014084 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 Euteleosteomorpha ANCESTRAL SPECIES 30 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00390000014084 ENSGT01030000234578.B.a ENSGT00390000006747 ENSGT00950000183117.a.a ENSGT00940000158254 ENSGT00940000155067.b.a ENSGT00940000155067.a ENSGT00650000094663 ENSGT00390000002730.e.b ENSGT00950000183113.b.b.c.b ENSGT00940000160161.e.a Acanthomorphata ANCESTRAL SPECIES 47 ENSGT00940000156334.b ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000163513 ENSGT00950000183052.b.c.b.a ENSGT00940000158003 ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b Euacanthomorphacea ANCESTRAL SPECIES 18 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Percomorphaceae ANCESTRAL SPECIES 19 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000175478 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Percomorphaceae_B ANCESTRAL SPECIES 21 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Ovalentaria ANCESTRAL SPECIES 22 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Atherinomorphae ANCESTRAL SPECIES 21 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Oryzias ANCESTRAL SPECIES 20 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g.c #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a.d ##35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Oryzias_b ANCESTRAL SPECIES 19 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g.c #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a.d ##35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Javanese ricefish MODERN SPECIES 15 TMCC3 (ENSOJAG00000023094) #7 ndufa12 (ENSOJAG00000023100) #8 ENSOJAG00000023148 #9 vezt (ENSOJAG00000023164) #10 METAP2 (ENSOJAG00000023181) #11 usp44 (ENSOJAG00000023208) #12 ntn4 (ENSOJAG00000023221) #13 amdhd1 (ENSOJAG00000023244) #14 tspan9b (ENSOJAG00000023257) #15 elapor2b (ENSOJAG00000023275) #16 klhl42 (ENSOJAG00000023323) #17 nrip2 (ENSOJAG00000023325) #18 itfg2 (ENSOJAG00000023327) #19 ascl1a (ENSOJAG00000023335) #20 pah (ENSOJAG00000023397) #21 th2 (ENSOJAG00000023523) #22 nup37 (ENSOJAG00000023532) #23 parpbp (ENSOJAG00000023537) #24 ENSOJAG00000023539 #25 igf1 (ENSOJAG00000023545) #26 ENSOJAG00000023553 #27 btbd11a (ENSOJAG00000023574) #28 ENSOJAG00000023593 #29 ENSOJAG00000023595 #30 cry1a (ENSOJAG00000023629) #31 MTERF2 (ENSOJAG00000023694) #32 syt10 (ENSOJAG00000023697) #33 ENSOJAG00000023700 #34 syt1a (ENSOJAG00000023710) #35 pawr (ENSOJAG00000023718) #36 ppp1r12a (ENSOJAG00000023721) #37 Indian medaka MODERN SPECIES 2 ndufa12 (ENSOMEG00000023833) #8 fgd6 (ENSOMEG00000000640) vezt (ENSOMEG00000002973) #10 metap2b (ENSOMEG00000002985) #11 usp44 (ENSOMEG00000002993) #12 ntn4 (ENSOMEG00000003007) #13 snrpf (ENSOMEG00000003018) amdhd1 (ENSOMEG00000003082) #14 tspan9b (ENSOMEG00000003109) #15 klhl42 (ENSOMEG00000003121) #17 nrip2 (ENSOMEG00000003128) #18 elapor2b (ENSOMEG00000003209) #16 itfg2 (ENSOMEG00000003265) #19 ascl1a (ENSOMEG00000003274) #20 pah (ENSOMEG00000003302) #21 th2 (ENSOMEG00000003320) #22 nup37 (ENSOMEG00000003353) #23 parpbp (ENSOMEG00000003398) #24 ENSOMEG00000003411 #25 igf1 (ENSOMEG00000003424) #26 ENSOMEG00000003451 btbd11a (ENSOMEG00000003530) #28 cry1a (ENSOMEG00000003568) #31 ENSOMEG00000003581 #32 tnnt2c (ENSOMEG00000003593) syt10 (ENSOMEG00000003610) #33 ENSOMEG00000003669 #34 cyb5r3 (ENSOMEG00000003698) syt1a (ENSOMEG00000003714) ##35 pawr (ENSOMEG00000003730) #36 ppp1r12a (ENSOMEG00000003801) #37 Oryzias_a ANCESTRAL SPECIES 15 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000164757 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g.c #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a.d ##35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 53 ENSOSIG00000007254 #16 klhl42 (ENSOSIG00000007247) #17 nrip2 (ENSOSIG00000007246) #18 itfg2 (ENSOSIG00000007245) #19 ascl1a (ENSOSIG00000007243) #20 pah (ENSOSIG00000007090) #21 th2 (ENSOSIG00000006727) #22 nup37 (ENSOSIG00000006723) #23 parpbp (ENSOSIG00000006718) #24 ENSOSIG00000006717 #25 igf1 (ENSOSIG00000006715) #26 ENSOSIG00000006713 ENSOSIG00000006712 btbd11a (ENSOSIG00000006349) #28 cry1a (ENSOSIG00000004452) #31 MTERF2 (ENSOSIG00000004407) #32 tnnt2c (ENSOSIG00000004405) syt10 (ENSOSIG00000004402) #33 ENSOSIG00000004396 #34 cyb5r3 (ENSOSIG00000003779) syt1a (ENSOSIG00000003691) ##35 Chinese medaka MODERN SPECIES 51 ENSOSIG00000010255 #16 klhl42 (ENSOSIG00000010254) #17 nrip2 (ENSOSIG00000010252) #18 itfg2 (ENSOSIG00000010251) #19 ascl1a (ENSOSIG00000010250) #20 pah (ENSOSIG00000008674) #21 th2 (ENSOSIG00000008247) #22 nup37 (ENSOSIG00000008243) #23 parpbp (ENSOSIG00000008240) #24 ENSOSIG00000008239 #25 ENSOSIG00000008238 ENSOSIG00000008237 igf1 (ENSOSIG00000008154) #26 btbd11a (ENSOSIG00000008093) #28 cry1a (ENSOSIG00000007925) ##31 MTERF2 (ENSOSIG00000007922) #32 tnnt2c (ENSOSIG00000007920) syt10 (ENSOSIG00000007919) #33 ENSOSIG00000007916 ENSOSIG00000007911 syt1a (ENSOSIG00000007909) #35 pawr (ENSOSIG00000007906) #36 Japanese Medaka HdrR MODERN SPECIES 15 TMCC3 (ENSORLG00000016684) #7 ndufa12 (ENSORLG00000023845) #8 fgd6 (ENSORLG00000016673) vezt (ENSORLG00000016663) #10 metap2b (ENSORLG00000016650) #11 usp44 (ENSORLG00000016627) #12 NTN4 (ENSORLG00000016622) #13 amdhd1 (ENSORLG00000016609) #14 tspan9b (ENSORLG00000016594) #15 ENSORLG00000016575 #16 klhl42 (ENSORLG00000016542) #17 nrip2 (ENSORLG00000016536) #18 itfg2 (ENSORLG00000016526) #19 ascl1a (ENSORLG00000016504) #20 pah (ENSORLG00000016500) #21 th2 (ENSORLG00000016488) #22 nup37 (ENSORLG00000016475) #23 parpbp (ENSORLG00000016457) #24 ENSORLG00000016450 #25 igf1 (ENSORLG00000016443) #26 ENSORLG00000027418 cox6b2 (ENSORLG00000016425) btbd11a (ENSORLG00000016422) #28 ENSORLG00000016390 #32 cry1a (ENSORLG00000016410) #31 tnnt2c (ENSORLG00000016386) syt10 (ENSORLG00000016381) #33 ENSORLG00000016372 #34 cyb5r3 (ENSORLG00000018656) syt1a (ENSORLG00000016339) ##35 pawr (ENSORLG00000026995) #36 Cyprinodontiformes ANCESTRAL SPECIES 19 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Aplocheiloidei ANCESTRAL SPECIES 14 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 ENSGT00390000013067.l.l Mangrove rivulus MODERN SPECIES 19 vezt (ENSKMAG00000013720) #10 ENSKMAG00000013703 metap2b (ENSKMAG00000013689) #11 usp44 (ENSKMAG00000013656) #12 ntn4 (ENSKMAG00000013615) #13 snrpf (ENSKMAG00000013566) amdhd1 (ENSKMAG00000013501) #14 tspan9b (ENSKMAG00000013466) #15 elapor2b (ENSKMAG00000013371) #16 ENSKMAG00000013331 klhl42 (ENSKMAG00000013321) #17 nrip2 (ENSKMAG00000013305) #18 itfg2 (ENSKMAG00000013255) #19 ascl1a (ENSKMAG00000013228) #20 pah (ENSKMAG00000013176) #21 th2 (ENSKMAG00000013134) #22 nup37 (ENSKMAG00000013089) #23 parpbp (ENSKMAG00000013026) #24 ENSKMAG00000012992 #25 igf1 (ENSKMAG00000012960) #26 ENSKMAG00000012934 ENSKMAG00000012909 btbd11a (ENSKMAG00000012822) #28 cry1a (ENSKMAG00000012604) #31 tnnt2c (ENSKMAG00000012574) syt10 (ENSKMAG00000012546) #33 ENSKMAG00000012499 #34 cyb5r3 (ENSKMAG00000012463) syt1a (ENSKMAG00000012419) #35 ENSKMAG00000012380 pawr (ENSKMAG00000012360) #36 Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015023903 ENSNFUG00015023897 CD9B (ENSNFUG00015023887) CWF19L1 (ENSNFUG00015023862) DMTF1 (ENSNFUG00015023853) TMEM243A (ENSNFUG00015023848) dclre1c (ENSNFUG00015023833) CPM (ENSNFUG00015023821) ENSNFUG00015023818 TRHDE (ENSNFUG00015023753) ENSNFUG00015023748 itfg2 (ENSNFUG00015023745) #19 CR847950.4 (ENSNFUG00015023740) ASCL1A (ENSNFUG00015023739) #20 pah (ENSNFUG00015023683) #21 th2 (ENSNFUG00015022835) #22 nup37 (ENSNFUG00015022768) #23 PARPBP (ENSNFUG00015022762) #24 ENSNFUG00015022756 #25 IGF1 (ENSNFUG00015022671) #26 ENSNFUG00015022646 btbd11a (ENSNFUG00015022372) #28 cry1a (ENSNFUG00015018834) #31 tnnt2c (ENSNFUG00015018733) SYT10 (ENSNFUG00015018728) #33 ENSNFUG00015018727 ENSNFUG00015018708 #34 CYB5R3 (ENSNFUG00015018146) SYT1A (ENSNFUG00015018114) #35 ENSNFUG00015018105 PAWR (ENSNFUG00015018098) #36 Cyprinodontoidei ANCESTRAL SPECIES 20 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00840000130048.b ENSGT00940000162287.B.a.c ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 Poeciliinae ANCESTRAL SPECIES 19 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000162287.B.a.c ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b Poecilia ANCESTRAL SPECIES 29 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000162287.B.a.c ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b NAME_6 ANCESTRAL SPECIES 55 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Amazon molly MODERN SPECIES 320 elapor2b (ENSPFOG00000018104) #16 klhl42 (ENSPFOG00000018095) #17 ENSPFOG00000023570 nrip2 (ENSPFOG00000024434) #18 itfg2 (ENSPFOG00000018076) #19 ascl1a (ENSPFOG00000018073) #20 pah (ENSPFOG00000018041) #21 th2 (ENSPFOG00000018017) #22 nup37 (ENSPFOG00000017980) #23 parpbp (ENSPFOG00000017952) #24 ENSPFOG00000017948 #25 igf1 (ENSPFOG00000017930) #26 ENSPFOG00000017913 btbd11a (ENSPFOG00000017882) #28 ENSPFOG00000017877 #32 cry1a (ENSPFOG00000017846) #31 tnnt2c (ENSPFOG00000020848) syt10 (ENSPFOG00000017820) #33 ENSPFOG00000017778 #34 cyb5r3 (ENSPFOG00000017742) syt1a (ENSPFOG00000017713) #35 pawr (ENSPFOG00000017689) #36 ppp1r12a (ENSPFOG00000017528) #37 Sailfin molly MODERN SPECIES 1204 pah (ENSPLAG00000021918) #21 th2 (ENSPLAG00000021955) #22 nup37 (ENSPLAG00000022012) #23 parpbp (ENSPLAG00000022021) #24 ENSPLAG00000022039 #25 igf1 (ENSPLAG00000022067) #26 ENSPLAG00000022076 ENSPLAG00000000470 btbd11a (ENSPLAG00000022149) #28 Guppy MODERN SPECIES 454 KCNA1 (ENSPREG00000006687) KCNA5 (ENSPREG00000006696) ENSPREG00000006710 atp6v1f (ENSPREG00000006723) lamtor4 (ENSPREG00000006730) arf5 (ENSPREG00000006744) gcc1 (ENSPREG00000006764) dennd6b (ENSPREG00000006776) gnsa (ENSPREG00000006816) ENSPREG00000006838 #16 klhl42 (ENSPREG00000006874) #17 nrip2 (ENSPREG00000006888) #18 itfg2 (ENSPREG00000006906) #19 ascl1a (ENSPREG00000006969) #20 pah (ENSPREG00000006984) #21 th2 (ENSPREG00000007023) #22 nup37 (ENSPREG00000007053) #23 parpbp (ENSPREG00000007077) #24 ENSPREG00000007091 #25 igf1 (ENSPREG00000007109) #26 ENSPREG00000007135 ENSPREG00000007146 btbd11a (ENSPREG00000007168) #28 ENSPREG00000007220 slco1d1 (ENSPREG00000007258) slco1d1 (ENSPREG00000007441) ENSPREG00000007468 SLC2A13 (ENSPREG00000007504) ENSPREG00000007544 ABCD2 (ENSPREG00000007569) ENSPREG00000007642 Platyfish MODERN SPECIES 8 fgd6 (ENSXMAG00000008908) vezt (ENSXMAG00000008904) #10 metap2b (ENSXMAG00000015392) #11 usp44 (ENSXMAG00000015410) #12 ENSXMAG00000023948 ntn4 (ENSXMAG00000015415) #13 snrpf (ENSXMAG00000015448) amdhd1 (ENSXMAG00000015455) #14 tspan9b (ENSXMAG00000026102) #15 elapor2b (ENSXMAG00000003572) #16 klhl42 (ENSXMAG00000003606) #17 nrip2 (ENSXMAG00000025434) #18 itfg2 (ENSXMAG00000017228) #19 ascl1a (ENSXMAG00000019614) #20 pah (ENSXMAG00000017271) #21 th2 (ENSXMAG00000017293) #22 nup37 (ENSXMAG00000017326) #23 parpbp (ENSXMAG00000017346) #24 ENSXMAG00000017362 #25 igf1 (ENSXMAG00000028624) #26 ENSXMAG00000026515 ENSXMAG00000024762 btbd11a (ENSXMAG00000025507) #28 cyb5r3 (ENSXMAG00000017411) ENSXMAG00000017426 #34 syt10 (ENSXMAG00000017449) #33 ENSXMAG00000019615 #32 cry1a (ENSXMAG00000017466) #31 syt1a (ENSXMAG00000017468) #35 pawr (ENSXMAG00000026362) #36 ppp1r12a (ENSXMAG00000017534) #37 NAME_4 ANCESTRAL SPECIES 16 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000162287.B.a.c ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Mummichog MODERN SPECIES 2321 fgd6 (ENSFHEG00000003155) vezt (ENSFHEG00000003165) #10 metap2b (ENSFHEG00000003182) #11 usp44 (ENSFHEG00000003209) #12 ENSFHEG00000003216 ntn4 (ENSFHEG00000003235) #13 snrpf (ENSFHEG00000003240) amdhd1 (ENSFHEG00000003252) #14 tspan9b (ENSFHEG00000003256) #15 elapor2b (ENSFHEG00000000095) #16 klhl42 (ENSFHEG00000003330) #17 nrip2 (ENSFHEG00000003337) #18 itfg2 (ENSFHEG00000003361) #19 ascl1a (ENSFHEG00000003373) #20 pah (ENSFHEG00000003406) #21 th2 (ENSFHEG00000003433) #22 nup37 (ENSFHEG00000003503) #23 parpbp (ENSFHEG00000003517) #24 ENSFHEG00000003530 #25 igf1 (ENSFHEG00000003547) #26 ENSFHEG00000003558 ENSFHEG00000003583 ENSFHEG00000003596 btbd11a (ENSFHEG00000003637) #28 cry1a (ENSFHEG00000003663) #31 ENSFHEG00000003669 #32 tnnt2c (ENSFHEG00000003676) syt10 (ENSFHEG00000003696) #33 ENSFHEG00000003698 #33 Sheepshead minnow MODERN SPECIES 119 ndufa12 (ENSCVAG00000015488) #8 fgd6 (ENSCVAG00000015504) vezt (ENSCVAG00000015511) #10 metap2b (ENSCVAG00000015520) #11 usp44 (ENSCVAG00000015551) #12 ntn4 (ENSCVAG00000015586) #13 snrpf (ENSCVAG00000000397) amdhd1 (ENSCVAG00000015623) #14 tspan9b (ENSCVAG00000015645) #15 elapor2b (ENSCVAG00000015724) #16 klhl42 (ENSCVAG00000015737) #17 nrip2 (ENSCVAG00000015746) #18 itfg2 (ENSCVAG00000015800) #19 ascl1a (ENSCVAG00000015813) #20 pah (ENSCVAG00000015847) #21 th2 (ENSCVAG00000015881) #22 nup37 (ENSCVAG00000015924) #23 parpbp (ENSCVAG00000015932) #24 ENSCVAG00000016009 #25 igf1 (ENSCVAG00000016044) #26 ENSCVAG00000016092 ENSCVAG00000016098 btbd11a (ENSCVAG00000016113) #28 cry1a (ENSCVAG00000016128) #31 ENSCVAG00000016131 #32 syt10 (ENSCVAG00000016202) #33 ENSCVAG00000016230 #34 cyb5r3 (ENSCVAG00000016259) syt1a (ENSCVAG00000016341) #35 pawr (ENSCVAG00000016350) #36 ppp1r12a (ENSCVAG00000016377) #37 Ovalentaria_B ANCESTRAL SPECIES 23 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 Cichlidae ANCESTRAL SPECIES 24 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000172707.b ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Pseudocrenilabrinae ANCESTRAL SPECIES 21 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000172707.b ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000172707.b ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Haplochromini ANCESTRAL SPECIES 9 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT01100000264078.b ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 ENSGT00390000013067.l.l Haplochromini_B ANCESTRAL SPECIES 11 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT01100000264078.b ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 ENSGT00940000158804.n.a Eastern happy MODERN SPECIES 8 vezt (ENSACLG00000015688) #10 ENSACLG00000015738 metap2b (ENSACLG00000015833) #11 usp44 (ENSACLG00000015861) #12 ntn4 (ENSACLG00000015962) #13 snrpf (ENSACLG00000016066) amdhd1 (ENSACLG00000016155) #14 tspan9b (ENSACLG00000016292) #15 elapor2b (ENSACLG00000016340) #16 klhl42 (ENSACLG00000016461) #17 nrip2 (ENSACLG00000016504) #18 itfg2 (ENSACLG00000016520) #19 ascl1a (ENSACLG00000016598) #20 ENSACLG00000016643 pah (ENSACLG00000016649) #21 th2 (ENSACLG00000016695) #22 nup37 (ENSACLG00000016738) #23 parpbp (ENSACLG00000016788) #24 pmch (ENSACLG00000016802) igf1 (ENSACLG00000016815) #26 ENSACLG00000016841 btbd11a (ENSACLG00000016936) #28 cry1a (ENSACLG00000017110) #31 MTERF2 (ENSACLG00000017181) #32 syt10 (ENSACLG00000017353) #33 ENSACLG00000017416 #34 cyb5r3 (ENSACLG00000017472) syt1a (ENSACLG00000017513) #35 pawr (ENSACLG00000017548) #36 ppp1r12a (ENSACLG00000017614) #37 foxm1 (ENSACLG00000017856) Zebra mbuna MODERN SPECIES 1099 ENSMZEG00005000794 ENSMZEG00005000813 #7 eri1 (ENSMZEG00005000837) ENSMZEG00005000865 ssbp1 (ENSMZEG00005000898) creb3l2 (ENSMZEG00005000947) ENSMZEG00005000961 ENSMZEG00005000984 ENSMZEG00005001045 ENSMZEG00005001054 nrip2 (ENSMZEG00005001086) #18 itfg2 (ENSMZEG00005001096) #19 ascl1a (ENSMZEG00005001134) #20 ENSMZEG00005001144 pah (ENSMZEG00005001158) #21 th2 (ENSMZEG00005001193) #22 nup37 (ENSMZEG00005001223) #23 parpbp (ENSMZEG00005001242) #24 pmch (ENSMZEG00005001251) igf1 (ENSMZEG00005001284) #26 ENSMZEG00005001313 btbd11a (ENSMZEG00005001355) #28 cry1a (ENSMZEG00005001451) #31 MTERF2 (ENSMZEG00005001466) #32 syt10 (ENSMZEG00005001603) #33 ENSMZEG00005001628 #34 cyb5r3 (ENSMZEG00005001636) syt1a (ENSMZEG00005001660) #35 pawr (ENSMZEG00005001704) #36 ppp1r12a (ENSMZEG00005001744) #37 foxm1 (ENSMZEG00005001943) P. nyererei MODERN SPECIES 487 fgd6 (ENSPNYG00000021583) vezt (ENSPNYG00000021619) #10 metap2b (ENSPNYG00000021636) #11 usp44 (ENSPNYG00000021662) #12 ntn4 (ENSPNYG00000021688) #13 snrpf (ENSPNYG00000021712) amdhd1 (ENSPNYG00000021749) #14 tspan9b (ENSPNYG00000021764) #15 elapor2b (ENSPNYG00000021790) #16 klhl42 (ENSPNYG00000021854) #17 nrip2 (ENSPNYG00000021862) #18 itfg2 (ENSPNYG00000021873) #19 ascl1a (ENSPNYG00000021891) #20 ENSPNYG00000021899 pah (ENSPNYG00000021907) #21 th2 (ENSPNYG00000021993) #22 nup37 (ENSPNYG00000022147) #23 parpbp (ENSPNYG00000022167) #24 ENSPNYG00000022181 #25 igf1 (ENSPNYG00000022201) #26 ENSPNYG00000022227 btbd11a (ENSPNYG00000022244) #28 cry1a (ENSPNYG00000022329) #31 MTERF2 (ENSPNYG00000022348) #32 syt10 (ENSPNYG00000022373) #33 Burton s mouthbrooder MODERN SPECIES 437 ENSHBUG00000000203 vezt (ENSHBUG00000008040) #10 metap2b (ENSHBUG00000008050) #11 usp44 (ENSHBUG00000008069) #12 ENSHBUG00000008093 ntn4 (ENSHBUG00000008139) #13 ENSHBUG00000008160 amdhd1 (ENSHBUG00000008199) #14 tspan9b (ENSHBUG00000008253) #15 elapor2b (ENSHBUG00000008321) #16 klhl42 (ENSHBUG00000008341) #17 nrip2 (ENSHBUG00000008345) #18 itfg2 (ENSHBUG00000008439) #19 ascl1a (ENSHBUG00000008452) #20 pah (ENSHBUG00000008494) #21 th2 (ENSHBUG00000008510) #22 nup37 (ENSHBUG00000008577) #23 parpbp (ENSHBUG00000008599) #24 ENSHBUG00000008609 #25 igf1 (ENSHBUG00000008635) #26 ENSHBUG00000008652 btbd11a (ENSHBUG00000008732) #28 cry1a (ENSHBUG00000008802) #31 MTERF2 (ENSHBUG00000008815) #32 tnnt2c (ENSHBUG00000008824) syt10 (ENSHBUG00000008857) #33 Lyretail cichlid MODERN SPECIES 291 ENSNBRG00000011853 fgd6 (ENSNBRG00000011809) vezt (ENSNBRG00000011771) #10 metap2b (ENSNBRG00000011759) #11 usp44 (ENSNBRG00000011724) #12 ntn4 (ENSNBRG00000011696) #13 snrpf (ENSNBRG00000011682) amdhd1 (ENSNBRG00000011657) #14 tspan9b (ENSNBRG00000011565) #15 elapor2b (ENSNBRG00000011472) #16 klhl42 (ENSNBRG00000011450) #17 nrip2 (ENSNBRG00000011429) #18 itfg2 (ENSNBRG00000011398) #19 ascl1a (ENSNBRG00000011381) #20 pah (ENSNBRG00000011340) #21 th2 (ENSNBRG00000011203) #22 nup37 (ENSNBRG00000011131) #23 parpbp (ENSNBRG00000011099) #24 ENSNBRG00000011057 #25 igf1 (ENSNBRG00000011029) #26 ENSNBRG00000011014 ENSNBRG00000010987 btbd11a (ENSNBRG00000010944) #28 ENSNBRG00000010937 MTERF2 (ENSNBRG00000010933) #32 cry1a (ENSNBRG00000010898) #31 tnnt2c (ENSNBRG00000010879) syt10 (ENSNBRG00000010856) #33 ENSNBRG00000010848 ENSNBRG00000010794 #34 cyb5r3 (ENSNBRG00000010756) Nile tilapia MODERN SPECIES 8 vezt (ENSONIG00000017844) #10 metap2b (ENSONIG00000017841) #11 usp44 (ENSONIG00000017839) #12 ntn4 (ENSONIG00000017835) #13 snrpf (ENSONIG00000031061) ENSONIG00000034393 amdhd1 (ENSONIG00000017833) #14 tspan9b (ENSONIG00000017829) #15 elapor2b (ENSONIG00000017824) #16 klhl42 (ENSONIG00000017822) #17 nrip2 (ENSONIG00000030365) #18 itfg2 (ENSONIG00000017820) #19 ascl1a (ENSONIG00000021219) #20 ENSONIG00000038297 pah (ENSONIG00000017811) #21 th2 (ENSONIG00000017806) #22 nup37 (ENSONIG00000041645) #23 ENSONIG00000042831 parpbp (ENSONIG00000017803) #24 ENSONIG00000029183 #25 igf1 (ENSONIG00000017800) #26 ENSONIG00000017799 btbd11a (ENSONIG00000017796) #28 cry1a (ENSONIG00000000075) #31 MTERF2 (ENSONIG00000020695) #32 tnnt2c (ENSONIG00000020696) ENSONIG00000000001 #34 syt10 (ENSONIG00000000002) #33 syt1a (ENSONIG00000000003) #35 pawr (ENSONIG00000028232) #36 ppp1r12a (ENSONIG00000000005) #37 Midas cichlid MODERN SPECIES 737 ENSACIG00000012722 fgd6 (ENSACIG00000012759) vezt (ENSACIG00000012829) #10 metap2b (ENSACIG00000013007) #11 usp44 (ENSACIG00000013159) #12 ntn4 (ENSACIG00000013183) #13 snrpf (ENSACIG00000013216) amdhd1 (ENSACIG00000013318) #14 tspan9b (ENSACIG00000013346) #15 elapor2b (ENSACIG00000013411) #16 klhl42 (ENSACIG00000013451) #17 nrip2 (ENSACIG00000013461) #18 itfg2 (ENSACIG00000013478) #19 ascl1a (ENSACIG00000013500) #20 pah (ENSACIG00000013511) #21 th2 (ENSACIG00000013549) #22 nup37 (ENSACIG00000013665) #23 parpbp (ENSACIG00000013691) #24 ENSACIG00000013710 #25 igf1 (ENSACIG00000013728) #26 ENSACIG00000013740 ENSACIG00000013750 btbd11a (ENSACIG00000013768) #28 cry1a (ENSACIG00000013832) #31 MTERF2 (ENSACIG00000014189) #32 tnnt2c (ENSACIG00000014196) syt10 (ENSACIG00000014226) #33 ENSACIG00000014242 ENSACIG00000014253 #34 cyb5r3 (ENSACIG00000014298) syt1a (ENSACIG00000014311) #35 Pomacentridae ANCESTRAL SPECIES 59 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00530000063817.b.b #32 ENSGT00940000155455.g #31 ENSGT00940000156419.b #28 ENSGT00940000154709.a.a ENSGT00940000158899.bb.b #33 ENSGT00940000158899.cb #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Bicolor damselfish MODERN SPECIES 448 ndufa12 (ENSSPAG00000003085) #8 fgd6 (ENSSPAG00000003112) vezt (ENSSPAG00000003139) #10 metap2b (ENSSPAG00000003159) #11 usp44 (ENSSPAG00000003185) #12 ntn4 (ENSSPAG00000003230) #13 snrpf (ENSSPAG00000003283) amdhd1 (ENSSPAG00000003428) #14 tspan9b (ENSSPAG00000003452) #15 elapor2b (ENSSPAG00000003471) #16 klhl42 (ENSSPAG00000003501) #17 nrip2 (ENSSPAG00000003520) #18 itfg2 (ENSSPAG00000003528) #19 ascl1a (ENSSPAG00000003572) #20 pah (ENSSPAG00000003583) #21 th2 (ENSSPAG00000003629) #22 nup37 (ENSSPAG00000003673) #23 parpbp (ENSSPAG00000003701) #24 ENSSPAG00000003726 #25 igf1 (ENSSPAG00000003763) #26 ENSSPAG00000003796 MTERF2 (ENSSPAG00000003841) #32 cry1a (ENSSPAG00000003856) #31 ENSSPAG00000003904 Pomacentridae_A ANCESTRAL SPECIES 58 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00530000063817.b.b #32 ENSGT00940000155455.g #31 ENSGT00940000156419.b #28 ENSGT00940000154709.a.a ENSGT00940000158899.cb #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Amphiprion ANCESTRAL SPECIES 19 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00530000063817.b.b #32 ENSGT00940000155455.g #31 ENSGT00940000156419.b #28 ENSGT00940000154709.a.a ENSGT00940000158899.cb #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Clown anemonefish MODERN SPECIES 3008 pah (ENSAOCG00000001591) #21 th2 (ENSAOCG00000021714) #22 nup37 (ENSAOCG00000021679) #23 Orange clownfish MODERN SPECIES 13 vezt (ENSAPEG00000022201) #10 METAP2 (ENSAPEG00000022182) #11 usp44 (ENSAPEG00000022159) #12 ENSAPEG00000022142 ntn4 (ENSAPEG00000022097) #13 snrpf (ENSAPEG00000022022) amdhd1 (ENSAPEG00000021994) #14 tspan9b (ENSAPEG00000021973) #15 elapor2b (ENSAPEG00000021953) #16 klhl42 (ENSAPEG00000021941) #17 ENSAPEG00000021936 nrip2 (ENSAPEG00000021926) #18 itfg2 (ENSAPEG00000021902) #19 ascl1a (ENSAPEG00000021889) #20 pah (ENSAPEG00000021861) #21 th2 (ENSAPEG00000021831) #22 nup37 (ENSAPEG00000021794) #23 parpbp (ENSAPEG00000021705) #24 ENSAPEG00000021659 #25 igf1 (ENSAPEG00000021610) #26 ENSAPEG00000021575 ENSAPEG00000021556 #32 cry1a (ENSAPEG00000021519) #31 btbd11a (ENSAPEG00000021482) #28 tnnt2c (ENSAPEG00000021437) syt10 (ENSAPEG00000021420) #33 ENSAPEG00000021411 #34 cyb5r3 (ENSAPEG00000021367) syt1a (ENSAPEG00000021322) #35 pawr (ENSAPEG00000021309) #36 ppp1r12a (ENSAPEG00000021244) #37 Spiny chromis MODERN SPECIES 2043 pah (ENSAPOG00000007745) #21 th2 (ENSAPOG00000007918) #22 nup37 (ENSAPOG00000007965) #23 ENSAPOG00000007991 #24 Percomorphaceae_C ANCESTRAL SPECIES 22 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000172707.b ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b Eupercaria ANCESTRAL SPECIES 21 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Tetraodontidae ANCESTRAL SPECIES 17 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.a ENSGT00940000156419.b #28 ENSGT00940000165530.a.b ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406.d #36 Fugu MODERN SPECIES 9 fgd6 (ENSTRUG00000022013) vezt (ENSTRUG00000015078) #10 metap2b (ENSTRUG00000015010) #11 usp44 (ENSTRUG00000021755) #12 ntn4 (ENSTRUG00000014966) #13 ENSTRUG00000014956 amdhd1 (ENSTRUG00000014921) #14 tspan9b (ENSTRUG00000014879) #15 ENSTRUG00000027986 elapor2b (ENSTRUG00000014753) #16 klhl42 (ENSTRUG00000014743) #17 nrip2 (ENSTRUG00000023306) #18 itfg2 (ENSTRUG00000014649) #19 ascl1a (ENSTRUG00000012801) #20 pah (ENSTRUG00000014530) #21 th2 (ENSTRUG00000014467) #22 nup37 (ENSTRUG00000014428) #23 parpbp (ENSTRUG00000014361) #24 pmch (ENSTRUG00000014356) igf1 (ENSTRUG00000022135) #26 ENSTRUG00000025881 btbd11a (ENSTRUG00000014167) #28 cry1a (ENSTRUG00000014032) #31 MTERF2 (ENSTRUG00000014030) #32 tnnt2c (ENSTRUG00000014014) syt10 (ENSTRUG00000013939) #33 ENSTRUG00000013873 #34 cyb5r3 (ENSTRUG00000020838) syt1a (ENSTRUG00000013727) #35 pawr (ENSTRUG00000013694) #36 ppp1r12a (ENSTRUG00000013358) #37 Tetraodon MODERN SPECIES 11 ENSTNIG00000012681 eri1 (ENSTNIG00000012680) TMCC3 (ENSTNIG00000012679) #7 ndufa12 (ENSTNIG00000012678) #8 fgd6 (ENSTNIG00000012677) vezt (ENSTNIG00000012676) #10 metap2b (ENSTNIG00000012675) #11 usp44 (ENSTNIG00000012674) #12 ntn4 (ENSTNIG00000012673) #13 snrpf (ENSTNIG00000012672) amdhd1 (ENSTNIG00000012671) #14 tspan9b (ENSTNIG00000012670) #15 elapor2b (ENSTNIG00000012669) #16 klhl42 (ENSTNIG00000012668) #17 pah (ENSTNIG00000012667) #21 th2 (ENSTNIG00000012666) #22 nup37 (ENSTNIG00000012665) #23 parpbp (ENSTNIG00000012664) #24 pmch (ENSTNIG00000001324) igf1 (ENSTNIG00000012663) #26 ENSTNIG00000000656 btbd11a (ENSTNIG00000012662) #28 ENSTNIG00000012661 cry1a (ENSTNIG00000012660) #31 tnnt2c (ENSTNIG00000012659) syt10 (ENSTNIG00000012658) #33 ENSTNIG00000012657 #34 cyb5r3 (ENSTNIG00000012656) syt1a (ENSTNIG00000012655) #35 ENSTNIG00000012654 #36 pawr (ENSTNIG00000012653) #36 Eupecaria_A ANCESTRAL SPECIES 21 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Ballan wrasse MODERN SPECIES 262 ENSLBEG00000008598 fgd6 (ENSLBEG00000008633) vezt (ENSLBEG00000008667) #10 metap2b (ENSLBEG00000008691) #11 usp44 (ENSLBEG00000008728) #12 ntn4 (ENSLBEG00000008777) #13 snrpf (ENSLBEG00000008800) amdhd1 (ENSLBEG00000008827) #14 tspan9b (ENSLBEG00000008871) #15 elapor2b (ENSLBEG00000008923) #16 klhl42 (ENSLBEG00000008995) #17 nrip2 (ENSLBEG00000009030) #18 itfg2 (ENSLBEG00000009067) #19 ascl1a (ENSLBEG00000009122) #20 pah (ENSLBEG00000009148) #21 th2 (ENSLBEG00000009302) #22 nup37 (ENSLBEG00000009795) #23 parpbp (ENSLBEG00000009853) #24 ENSLBEG00000009881 #25 igf1 (ENSLBEG00000009904) #26 ENSLBEG00000009921 ENSLBEG00000009958 ENSLBEG00000010011 #32 cry1a (ENSLBEG00000010050) #31 btbd11a (ENSLBEG00000010130) #28 ENSLBEG00000010191 ccnd2b (ENSLBEG00000010215) tigarb (ENSLBEG00000010244) fgf23 (ENSLBEG00000010263) fgf6b (ENSLBEG00000010310) rad51ap1 (ENSLBEG00000010326) Eupecaria_B ANCESTRAL SPECIES 21 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Eupecaria_C ANCESTRAL SPECIES 18 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263491.a.b.a.a.a.a.b.s.b ENSGT00400000022326.b.a.b.a.a ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 Eupercaria_incertae_sedis ANCESTRAL SPECIES 22 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263491.a.b.a.a.a.a.b.s.b ENSGT00400000022326.b.a.b.a.a ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 European seabass MODERN SPECIES 23 myf6 (ENSDLAG00005034355) ENSDLAG00005022222 ppp1r12a (ENSDLAG00005028115) #37 PAWR (ENSDLAG00005022241) #36 ENSDLAG00005022245 #35 ENSDLAG00005022253 ENSDLAG00005022300 #34 ENSDLAG00005022430 #33 ENSDLAG00005022452 ENSDLAG00005022457 #15 ENSDLAG00005022472 #16 ENSDLAG00005022693 #17 ENSDLAG00005027036 #19 ENSDLAG00005022698 #20 pah (ENSDLAG00005022732) #21 th2 (ENSDLAG00005023520) #22 NUP37 (ENSDLAG00005023603) #23 parpbp (ENSDLAG00005023617) #24 pmch (ENSDLAG00005023620) igf1 (ENSDLAG00005023625) #26 ENSDLAG00005026892 ENSDLAG00005027813 ENSDLAG00005023668 #28 ENSDLAG00005023868 #31 ENSDLAG00005023981 #32 ENSDLAG00005028222 ENSDLAG00005024007 ENSDLAG00005024264 ENSDLAG00005024687 TMCC3 (ENSDLAG00005034671) #7 ndufa12 (ENSDLAG00005024691) #8 Large yellow croaker MODERN SPECIES 491 ndufa12 (ENSLCRG00005014995) #8 fgd6 (ENSLCRG00005015006) vezt (ENSLCRG00005015125) #10 metap2b (ENSLCRG00005015126) #11 usp44 (ENSLCRG00005015128) #12 ntn4 (ENSLCRG00005015129) #13 snrpf (ENSLCRG00005015130) amdhd1 (ENSLCRG00005015131) #14 tspan9b (ENSLCRG00005015133) #15 elapor2b (ENSLCRG00005015142) #16 klhl42 (ENSLCRG00005015458) #17 itfg2 (ENSLCRG00005015463) #19 nrip2 (ENSLCRG00005015516) #18 ascl1a (ENSLCRG00005015517) #20 pah (ENSLCRG00005015533) #21 th2 (ENSLCRG00005017198) #22 nup37 (ENSLCRG00005017388) #23 parpbp (ENSLCRG00005017399) #24 ENSLCRG00005017401 #25 igf1 (ENSLCRG00005017409) #26 ENSLCRG00005017539 btbd11a (ENSLCRG00005017547) #28 cry1a (ENSLCRG00005017690) #31 MTERF2 (ENSLCRG00005017798) #32 tnnt2c (ENSLCRG00005017799) syt10 (ENSLCRG00005017801) #33 ENSLCRG00005017806 #34 cyb5r3 (ENSLCRG00005017871) syt1a (ENSLCRG00005018056) #35 ENSLCRG00005018060 ENSLCRG00005018062 Gilthead seabream MODERN SPECIES 5 usp44 (ENSSAUG00010018152) #12 ntn4 (ENSSAUG00010018150) #13 snrpf (ENSSAUG00010018146) amdhd1 (ENSSAUG00010018144) #14 tspan9b (ENSSAUG00010018138) #15 ENSSAUG00010018130 ENSSAUG00010018119 ENSSAUG00010018116 elapor2b (ENSSAUG00010017867) #16 klhl42 (ENSSAUG00010017856) #17 nrip2 (ENSSAUG00010017853) #18 itfg2 (ENSSAUG00010017851) #19 ascl1a (ENSSAUG00010017842) #20 ascl1a (ENSSAUG00010017839) #20 pah (ENSSAUG00010015550) #21 th2 (ENSSAUG00010015244) #22 nup37 (ENSSAUG00010015237) #23 parpbp (ENSSAUG00010015235) #24 pmch (ENSSAUG00010015234) igf1 (ENSSAUG00010015109) #26 ENSSAUG00010015101 btbd11a (ENSSAUG00010014766) #28 cry1a (ENSSAUG00010012268) #31 ENSSAUG00010012243 #32 tnnt2c (ENSSAUG00010012240) syt10 (ENSSAUG00010012236) #33 ENSSAUG00010020501 #34 cyb5r3 (ENSSAUG00010020421) syt1a (ENSSAUG00010020377) #35 pawr (ENSSAUG00010020373) #36 ppp1r12a (ENSSAUG00010020166) #37 Perciformes ANCESTRAL SPECIES 18 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Cottioidei ANCESTRAL SPECIES 19 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000168896 #25 ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Lumpfish MODERN SPECIES 15 ndufa12 (ENSCLMG00005018894) #8 fgd6 (ENSCLMG00005018893) vezt (ENSCLMG00005018882) #10 metap2b (ENSCLMG00005018879) #11 usp44 (ENSCLMG00005018877) #12 ntn4 (ENSCLMG00005018876) #13 snrpf (ENSCLMG00005018875) amdhd1 (ENSCLMG00005018874) #14 tspan9b (ENSCLMG00005018873) #15 elapor2b (ENSCLMG00005018872) #16 klhl42 (ENSCLMG00005018871) #17 nrip2 (ENSCLMG00005018870) #18 itfg2 (ENSCLMG00005018867) #19 ascl1a (ENSCLMG00005018865) #20 pah (ENSCLMG00005018810) #21 th2 (ENSCLMG00005018807) #22 nup37 (ENSCLMG00005018805) #23 parpbp (ENSCLMG00005018804) #24 ENSCLMG00005018803 #25 igf1 (ENSCLMG00005018801) #26 ENSCLMG00005018800 ENSCLMG00005018799 ENSCLMG00005018798 ABTB3 (ENSCLMG00005018797) #28 cry1a (ENSCLMG00005018166) #31 ENSCLMG00005018160 apaf1 (ENSCLMG00005016672) anks1b (ENSCLMG00005016584) uhrf1bp1l (ENSCLMG00005016536) ENSCLMG00005016528 ENSCLMG00005016527 Stickleback MODERN SPECIES 3 ENSGACG00000020067 #7 fgd6 (ENSGACG00000020065) ENSGACG00000020064 vezt (ENSGACG00000020060) #10 metap2b (ENSGACG00000020059) #11 usp44 (ENSGACG00000020058) #12 ntn4 (ENSGACG00000020056) #13 snrpf (ENSGACG00000020055) amdhd1 (ENSGACG00000020054) #14 tspan9b (ENSGACG00000020053) #15 elapor2b (ENSGACG00000020052) #16 klhl42 (ENSGACG00000020051) #17 nrip2 (ENSGACG00000020050) #18 itfg2 (ENSGACG00000020049) #19 ascl1a (ENSGACG00000020048) #20 th2 (ENSGACG00000020047) #22 nup37 (ENSGACG00000020046) #23 parpbp (ENSGACG00000020045) #24 ENSGACG00000020044 #25 igf1 (ENSGACG00000020042) #26 ENSGACG00000020041 btbd11a (ENSGACG00000020040) #28 cry1a (ENSGACG00000020037) #31 ENSGACG00000020036 #32 tnnt2c (ENSGACG00000020034) syt10 (ENSGACG00000020031) #33 ENSGACG00000020026 #34 cyb5r3 (ENSGACG00000020019) syt1a (ENSGACG00000020017) #35 pawr (ENSGACG00000020015) #36 ppp1r12a (ENSGACG00000020012) #37 Perciformes_a ANCESTRAL SPECIES 19 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT01100000263533.b.b.a.a.a.b.a ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Pike perch MODERN SPECIES 28 ndufa12 (ENSSLUG00000007433) #8 fgd6 (ENSSLUG00000007421) vezt (ENSSLUG00000007416) #10 metap2b (ENSSLUG00000007275) #11 usp44 (ENSSLUG00000007245) #12 ntn4 (ENSSLUG00000007235) #13 snrpf (ENSSLUG00000007230) amdhd1 (ENSSLUG00000007223) #14 tspan9b (ENSSLUG00000007211) #15 elapor2b (ENSSLUG00000007126) #16 klhl42 (ENSSLUG00000007097) #17 nrip2 (ENSSLUG00000007092) #18 itfg2 (ENSSLUG00000007037) #19 ascl1a (ENSSLUG00000007018) #20 pah (ENSSLUG00000005452) #21 th2 (ENSSLUG00000005335) #22 nup37 (ENSSLUG00000005270) #23 parpbp (ENSSLUG00000005238) #24 pmch (ENSSLUG00000005227) IGF-I (ENSSLUG00000004805) #26 ENSSLUG00000004758 btbd11a (ENSSLUG00000004616) #28 cry1a (ENSSLUG00000003675) #31 MTERF2 (ENSSLUG00000003583) #32 syt10 (ENSSLUG00000003569) #33 ENSSLUG00000003558 #33 ENSSLUG00000002793 #34 cyb5r3 (ENSSLUG00000002598) syt1a (ENSSLUG00000002503) #35 pawr (ENSSLUG00000002488) #36 ppp1r12a (ENSSLUG00000002356) #37 Channel bull blenny MODERN SPECIES 15 metap2b (ENSCGOG00000022870) #11 ENSCGOG00000022865 usp44 (ENSCGOG00000022864) #12 ntn4 (ENSCGOG00000022863) #13 snrpf (ENSCGOG00000022853) amdhd1 (ENSCGOG00000022850) #14 snrpf (ENSCGOG00000022846) amdhd1 (ENSCGOG00000022844) #14 tspan9b (ENSCGOG00000022823) #15 elapor2b (ENSCGOG00000022556) #16 klhl42 (ENSCGOG00000022519) #17 nrip2 (ENSCGOG00000022518) #18 itfg2 (ENSCGOG00000022503) #19 ascl1a (ENSCGOG00000022495) #20 pah (ENSCGOG00000021599) #21 th2 (ENSCGOG00000021420) #22 nup37 (ENSCGOG00000021365) #23 parpbp (ENSCGOG00000021360) #24 pmch (ENSCGOG00000021359) igf1 (ENSCGOG00000021110) #26 ENSCGOG00000021090 btbd11a (ENSCGOG00000020950) #28 MTERF2 (ENSCGOG00000020933) #32 CD9 (ENSCGOG00000020917) ENSCGOG00000020908 acot14 (ENSCGOG00000020865) ENSCGOG00000020863 ssbp1 (ENSCGOG00000020859) creb3l2 (ENSCGOG00000020856) ENSCGOG00000018998 ENSCGOG00000018962 Percomorphaceae_D ANCESTRAL SPECIES 22 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Anabantaria ANCESTRAL SPECIES 21 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000163513 ENSGT00950000183169.A.a.a ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Anabantoidei ANCESTRAL SPECIES 21 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000163513 ENSGT00950000183169.A.a.a ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Climbing perch MODERN SPECIES 14 ndufa12 (ENSATEG00000022496) #8 fgd6 (ENSATEG00000022513) vezt (ENSATEG00000022542) #10 METAP2 (ENSATEG00000022567) #11 USP44 (ENSATEG00000022583) #12 ntn4 (ENSATEG00000022608) #13 SNRPF (ENSATEG00000022625) amdhd1 (ENSATEG00000022667) #14 ENSATEG00000022678 #15 ENSATEG00000022701 #16 klhl42 (ENSATEG00000022766) #17 ENSATEG00000022782 #18 itfg2 (ENSATEG00000022806) #19 ENSATEG00000022825 #20 pah (ENSATEG00000022831) #21 th2 (ENSATEG00000022864) #22 NUP37 (ENSATEG00000022933) #23 parpbp (ENSATEG00000022956) #24 pmch (ENSATEG00000022998) igf1 (ENSATEG00000023026) #26 ENSATEG00000023044 ENSATEG00000029039 btbd11a (ENSATEG00000023064) #28 ENSATEG00000023083 #31 tnnt2c (ENSATEG00000023096) ENSATEG00000023107 #33 ENSATEG00000026602 #33 ENSATEG00000023121 #34 ENSATEG00000023152 ENSATEG00000023170 #35 ENSATEG00000023210 #36 Siamese fighting fish MODERN SPECIES 20 fgf6b (ENSBSLG00000005740) ndufa12 (ENSBSLG00000005750) #8 fgd6 (ENSBSLG00000005771) vezt (ENSBSLG00000005881) #10 metap2b (ENSBSLG00000005901) #11 usp44 (ENSBSLG00000005978) #12 NTN4 (ENSBSLG00000005981) #13 amdhd1 (ENSBSLG00000005996) #14 tspan9b (ENSBSLG00000006012) #15 elapor2b (ENSBSLG00000006020) #16 klhl42 (ENSBSLG00000006090) #17 nrip2 (ENSBSLG00000006093) #18 itfg2 (ENSBSLG00000006095) #19 ascl1a (ENSBSLG00000006101) #20 pah (ENSBSLG00000006111) #21 th2 (ENSBSLG00000006132) #22 nup37 (ENSBSLG00000006190) #23 parpbp (ENSBSLG00000006209) #24 pmch (ENSBSLG00000006216) igf1 (ENSBSLG00000006224) #26 ENSBSLG00000006232 btbd11a (ENSBSLG00000006250) #28 cry1a (ENSBSLG00000007173) #31 syt10 (ENSBSLG00000007302) #33 ENSBSLG00000007321 #34 cyb5r3 (ENSBSLG00000007400) syt1a (ENSBSLG00000007799) #35 pawr (ENSBSLG00000007919) #36 ppp1r12a (ENSBSLG00000007997) #37 rps16 (ENSBSLG00000008793) myf6 (ENSBSLG00000008938) Zig-zag eel MODERN SPECIES 15 ndufa12 (ENSMAMG00000027238) #8 fgd6 (ENSMAMG00000017007) vezt (ENSMAMG00000016818) #10 METAP2 (ENSMAMG00000016805) #11 USP44 (ENSMAMG00000016772) #12 ntn4 (ENSMAMG00000016733) #13 SNRPF (ENSMAMG00000016593) amdhd1 (ENSMAMG00000016384) #14 ENSMAMG00000026753 #15 ENSMAMG00000016348 #16 klhl42 (ENSMAMG00000016338) #17 ENSMAMG00000016311 #18 itfg2 (ENSMAMG00000016273) #19 ENSMAMG00000016256 #20 pah (ENSMAMG00000016220) #21 th2 (ENSMAMG00000016040) #22 nup37 (ENSMAMG00000016017) #23 parpbp (ENSMAMG00000016003) #24 pmch (ENSMAMG00000015727) igf1 (ENSMAMG00000015704) #26 ENSMAMG00000015670 btbd11a (ENSMAMG00000015616) #28 ENSMAMG00000015580 #31 tnnt2c (ENSMAMG00000015546) ENSMAMG00000015509 #33 ENSMAMG00000024270 #33 ENSMAMG00000015433 #34 ENSMAMG00000015393 ENSMAMG00000015373 #35 ENSMAMG00000015337 #36 ppp1r12a (ENSMAMG00000015240) #37 Carangaria ANCESTRAL SPECIES 22 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Pleuronectoidei ANCESTRAL SPECIES 16 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 ENSGT00940000156120.a #37 Turbot MODERN SPECIES 11 ndufa12 (ENSSMAG00000005726) #8 fgd6 (ENSSMAG00000005702) vezt (ENSSMAG00000028160) #10 METAP2 (ENSSMAG00000005667) #11 USP44 (ENSSMAG00000005649) #12 ntn4 (ENSSMAG00000005605) #13 SNRPF (ENSSMAG00000005533) amdhd1 (ENSSMAG00000005484) #14 ENSSMAG00000005457 #15 ENSSMAG00000005360 #16 klhl42 (ENSSMAG00000005334) #17 ENSSMAG00000022137 #18 itfg2 (ENSSMAG00000005257) #19 ENSSMAG00000005248 #20 pah (ENSSMAG00000005207) #21 th2 (ENSSMAG00000005181) #22 nup37 (ENSSMAG00000005160) #23 parpbp (ENSSMAG00000005145) #24 pmch (ENSSMAG00000022672) igf1 (ENSSMAG00000005115) #26 ENSSMAG00000030625 ENSSMAG00000005081 btbd11a (ENSSMAG00000005012) #28 ENSSMAG00000004964 #31 ENSSMAG00000005003 #32 tnnt2c (ENSSMAG00000004942) ENSSMAG00000004931 #33 ENSSMAG00000004880 #34 ENSSMAG00000004819 ENSSMAG00000004787 #35 ENSSMAG00000004775 #36 Tongue sole MODERN SPECIES 18 pawr (ENSCSEG00000004529) #36 syt1a (ENSCSEG00000004537) #35 cyb5r3 (ENSCSEG00000004558) ENSCSEG00000004570 #34 syt10 (ENSCSEG00000004582) #33 MTERF2 (ENSCSEG00000004606) #32 cry1a (ENSCSEG00000004597) #31 amdhd1 (ENSCSEG00000004613) #14 tspan9b (ENSCSEG00000004608) #15 elapor2b (ENSCSEG00000004623) #16 klhl42 (ENSCSEG00000004627) #17 nrip2 (ENSCSEG00000004633) #18 ENSCSEG00000004636 ascl1a (ENSCSEG00000004639) #20 pah (ENSCSEG00000004644) #21 th2 (ENSCSEG00000004662) #22 nup37 (ENSCSEG00000004667) #23 parpbp (ENSCSEG00000004674) #24 ENSCSEG00000004687 #25 igf1 (ENSCSEG00000004697) #26 ENSCSEG00000004721 btbd11a (ENSCSEG00000004735) #28 snrpf (ENSCSEG00000004748) ntn4 (ENSCSEG00000004754) #13 usp44 (ENSCSEG00000004765) #12 metap2b (ENSCSEG00000004778) #11 vezt (ENSCSEG00000004802) #10 fgd6 (ENSCSEG00000004819) ENSCSEG00000004837 TMCC3 (ENSCSEG00000005859) #7 eri1 (ENSCSEG00000005863) Carangaria_A ANCESTRAL SPECIES 21 ENSGT00940000156334.a.b ENSGT00940000178380 ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000172707.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00940000154709.a.a ENSGT00940000158899 #33 ENSGT01050000244951.a.b.a.b.b #34 ENSGT00940000153962.b ENSGT00940000155394.i.a #35 ENSGT00390000000406 #36 Seriola ANCESTRAL SPECIES 9 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818 ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00840000130048.b ENSGT00940000156419.b #28 ENSGT00940000155455.g #31 ENSGT00530000063817.b.b #32 ENSGT00390000018424 ENSGT01010000222336.b.a.b.a ENSGT01050000244882.a.a.a.a.b ENSGT00950000182824.a.a.a.a.b ENSGT00390000009583 ENSGT00390000017998 ENSGT00940000157998 Greater amberjack MODERN SPECIES 60 ndufa12 (ENSSDUG00000016121) #8 fgd6 (ENSSDUG00000016132) vezt (ENSSDUG00000016162) #10 metap2b (ENSSDUG00000016178) #11 usp44 (ENSSDUG00000016194) #12 ntn4 (ENSSDUG00000016238) #13 snrpf (ENSSDUG00000016283) amdhd1 (ENSSDUG00000016290) #14 tspan9b (ENSSDUG00000016318) #15 elapor2b (ENSSDUG00000016349) #16 klhl42 (ENSSDUG00000016448) #17 nrip2 (ENSSDUG00000016462) #18 itfg2 (ENSSDUG00000016493) #19 ascl1a (ENSSDUG00000016538) #20 pah (ENSSDUG00000016548) #21 th2 (ENSSDUG00000016577) #22 nup37 (ENSSDUG00000016615) #23 parpbp (ENSSDUG00000016645) #24 pmch (ENSSDUG00000016677) igf1 (ENSSDUG00000016698) #26 ENSSDUG00000016734 btbd11a (ENSSDUG00000016744) #28 cry1a (ENSSDUG00000016784) #31 MTERF2 (ENSSDUG00000016802) #32 ENSSDUG00000016804 acot14 (ENSSDUG00000016832) AVPR1A (ENSSDUG00000016871) srgap1b (ENSSDUG00000017062) kics2 (ENSSDUG00000017120) TMEM19 (ENSSDUG00000017135) rab3ip (ENSSDUG00000017171) Yellowtail amberjack MODERN SPECIES 2989 vezt (ENSSLDG00000005374) #10 metap2b (ENSSLDG00000005344) #11 usp44 (ENSSLDG00000005301) #12 ntn4 (ENSSLDG00000005247) #13 snrpf (ENSSLDG00000005119) amdhd1 (ENSSLDG00000005072) #14 tspan9b (ENSSLDG00000004989) #15 elapor2b (ENSSLDG00000004921) #16 klhl42 (ENSSLDG00000004894) #17 nrip2 (ENSSLDG00000004872) #18 itfg2 (ENSSLDG00000004809) #19 ascl1a (ENSSLDG00000004770) #20 pah (ENSSLDG00000004715) #21 th2 (ENSSLDG00000004650) #22 nup37 (ENSSLDG00000004590) #23 parpbp (ENSSLDG00000004566) #24 pmch (ENSSLDG00000004554) igf1 (ENSSLDG00000004529) #26 ENSSLDG00000004485 btbd11a (ENSSLDG00000004377) #28 MTERF2 (ENSSLDG00000004358) #32 cry1a (ENSSLDG00000004294) #31 ENSSLDG00000004226 acot14 (ENSSLDG00000004148) AVPR1A (ENSSLDG00000004134) srgap1b (ENSSLDG00000004008) Barramundi perch MODERN SPECIES 292 fgd6 (ENSLCAG00010026885) ENSLCAG00010026889 vezt (ENSLCAG00010026891) #10 metap2b (ENSLCAG00010026892) #11 usp44 (ENSLCAG00010026893) #12 ntn4 (ENSLCAG00010026894) #13 snrpf (ENSLCAG00010026895) amdhd1 (ENSLCAG00010026896) #14 klhl42 (ENSLCAG00010026897) #17 elapor2b (ENSLCAG00010026919) #16 tspan9b (ENSLCAG00010026930) #15 nrip2 (ENSLCAG00010026932) #18 itfg2 (ENSLCAG00010026936) #19 ascl1a (ENSLCAG00010026942) #20 pah (ENSLCAG00010026972) #21 th2 (ENSLCAG00010027029) #22 nup37 (ENSLCAG00010027047) #23 parpbp (ENSLCAG00010027051) #24 pmch (ENSLCAG00010027053) igf1 (ENSLCAG00010027059) #26 ENSLCAG00010027073 ENSLCAG00010027076 btbd11a (ENSLCAG00010027077) #28 cry1a (ENSLCAG00010027085) #31 MTERF2 (ENSLCAG00010027093) #32 tnnt2c (ENSLCAG00010027095) syt10 (ENSLCAG00010027097) #33 Tiger tail seahorse MODERN SPECIES 433 ssbp1 (ENSHCOG00000018912) ENSHCOG00000018888 eri1 (ENSHCOG00000018865) ENSHCOG00000018855 TMCC3 (ENSHCOG00000018827) #7 ntn4 (ENSHCOG00000018712) #13 ENSHCOG00000018663 amdhd1 (ENSHCOG00000018637) #14 tspan9b (ENSHCOG00000018619) #15 elapor2b (ENSHCOG00000018591) #16 ENSHCOG00000018560 itfg2 (ENSHCOG00000018527) #19 ENSHCOG00000018511 ascl1a (ENSHCOG00000018503) #20 pah (ENSHCOG00000018488) #21 th2 (ENSHCOG00000018465) #22 nup37 (ENSHCOG00000018356) #23 parpbp (ENSHCOG00000018307) #24 igf1 (ENSHCOG00000018270) #26 ENSHCOG00000018199 btbd11a (ENSHCOG00000018163) #28 cry1a (ENSHCOG00000018111) #31 tnnt2c (ENSHCOG00000018063) syt10 (ENSHCOG00000018057) #33 ENSHCOG00000018040 #34 ENSHCOG00000017982 TULP3 (ENSHCOG00000017974) ENSHCOG00000017961 foxm1 (ENSHCOG00000017947) ENSHCOG00000017941 ppfia2 (ENSHCOG00000017898) Pinecone sodierfish MODERN SPECIES 15 ndufa12 (ENSMMDG00005018449) #8 fgd6 (ENSMMDG00005018460) vezt (ENSMMDG00005018685) #10 METAP2 (ENSMMDG00005018690) #11 usp44 (ENSMMDG00005018730) #12 ntn4 (ENSMMDG00005018731) #13 snrpf (ENSMMDG00005018733) amdhd1 (ENSMMDG00005018734) #14 tspan9b (ENSMMDG00005018735) #15 elapor2b (ENSMMDG00005018739) #16 klhl42 (ENSMMDG00005018749) #17 nrip2 (ENSMMDG00005018750) #18 itfg2 (ENSMMDG00005018758) #19 ascl1a (ENSMMDG00005018763) #20 pah (ENSMMDG00005018768) #21 th2 (ENSMMDG00005018778) #22 nup37 (ENSMMDG00005018813) #23 parpbp (ENSMMDG00005018818) #24 ENSMMDG00005018820 #25 igf1 (ENSMMDG00005018826) #26 ENSMMDG00005018912 btbd11a (ENSMMDG00005018917) #28 cry1a (ENSMMDG00005018951) #31 MTERF2 (ENSMMDG00005020073) #32 tnnt2c (ENSMMDG00005020074) syt10 (ENSMMDG00005020079) #33 ENSMMDG00005020084 #33 ENSMMDG00005020134 #34 cyb5r3 (ENSMMDG00005020515) syt1a (ENSMMDG00005020740) #35 pawr (ENSMMDG00005020744) #36 Cod MODERN SPECIES 17 ENSGMOG00000016937 TBK1 (ENSGMOG00000016984) gpr19 (ENSGMOG00000029230) crebl2 (ENSGMOG00000017023) dusp16 (ENSGMOG00000025213) ENSGMOG00000006062 ENSGMOG00000006093 cradd (ENSGMOG00000010443) socs2 (ENSGMOG00000025287) ncaph2 (ENSGMOG00000003228) sco2 (ENSGMOG00000003285) ntn4 (ENSGMOG00000009327) #13 ENSGMOG00000007741 amdhd1 (ENSGMOG00000007738) #14 pah (ENSGMOG00000001263) #21 th2 (ENSGMOG00000001233) #22 nup37 (ENSGMOG00000001219) #23 parpbp (ENSGMOG00000001191) #24 IGF1 (ENSGMOG00000030090) #26 ENSGMOG00000001151 btbd11a (ENSGMOG00000001108) #28 ENSGMOG00000001088 #31 tnnt2c (ENSGMOG00000001076) ENSGMOG00000003257 #33 ENSGMOG00000010347 #34 ENSGMOG00000034372 ENSGMOG00000028775 ENSGMOG00000014279 ENSGMOG00000035632 ENSGMOG00000029906 ENSGMOG00000032127 Protacanthopterygii ANCESTRAL SPECIES 23 ENSGT00390000005848 #8 ENSGT00940000156334.a.b ENSGT00390000003290 #10 ENSGT00940000155016 #11 ENSGT00940000160526 #12 ENSGT00940000156615.a #13 ENSGT00940000154818.e.a ENSGT00390000008645 #14 ENSGT00940000158225.i.a #15 ENSGT00940000154983.c.b #16 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081.s.b #26 ENSGT00940000168896 #25 ENSGT00940000159081.s.a #26 ENSGT00390000014084 ENSGT01030000234578.B.a ENSGT00390000006747 ENSGT00950000183117.a.a ENSGT00940000158254 ENSGT00940000155067.b.a ENSGT00940000155067.a ENSGT00650000094663 ENSGT00390000002730.e.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 81 ENSGT00940000160526.i #12 ENSGT00940000156615.a.f #13 ENSGT00940000154818.e.a ENSGT00390000008645 #14 ENSGT00940000158225.i.a.c.a #15 ENSGT00940000154983.c.b.`b.a #16 ENSGT00940000160124.c #17 ENSGT00940000158225.i.a.c.b #15 ENSGT00940000154983.c.b.`b.b #16 ENSGT00940000160124.d #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611.d #20 ENSGT00950000182885.B.d #21 ENSGT00950000182885.C.b.e #22 ENSGT00390000010777.i #23 ENSGT00390000006088.j #24 ENSGT00940000168896 #25 ENSGT00940000159081.s.b.b.b #26 ENSGT00940000159081.s.b.a #26 ENSGT00390000014084.e ENSGT01030000234578.B.a.g.a.b ENSGT00390000006747 ENSGT00950000183117.a.a.h ENSGT00940000158254.f ENSGT00940000155067.a.z ENSGT00650000094663 ENSGT00390000002730.e.b.c ENSGT00950000183113.b.b.c.b.k ENSGT00940000160161.e.a.m.a Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000157275.a.a #7 ENSGT00390000005848.gb #8 ENSGT00940000156334.a.b.c ENSGT00390000003290.h.a.b #10 ENSGT00940000155016.cb #11 ENSGT00940000160526.j #12 ENSGT00940000156615.a.e #13 ENSGT00940000154818.e.a.a ENSGT00390000008645.h.b #14 ENSGT00940000158225.i.a.c.a #15 ENSGT00940000154983.c.b.`b.a #16 ENSGT00940000160124.c #17 ENSGT00950000182999.b.a.a.n #18 ENSGT00940000166611.c #20 ENSGT00950000182885.B.c #21 ENSGT00950000182885.C.b.e #22 ENSGT00390000010777.i #23 ENSGT00390000006088.j #24 ENSGT00390000004984.b ENSGT00940000159081.s.b.b.a #26 ENSGT00390000014084.f ENSGT01030000234578.B.a.h ENSGT01030000234578.B.a.g.b ENSGT00390000006747.o ENSGT00950000183117.a.a.g ENSGT00940000158254.e ENSGT00940000155067.b.a.c ENSGT00940000155067.a.y ENSGT00650000094663.a ENSGT00390000002730.e.b.d ENSGT00950000183113.b.b.c.b.l Salmo ANCESTRAL SPECIES 46 ENSGT00940000156334.a.b.c ENSGT00390000003290.h.a.b #10 ENSGT00940000155016.cb #11 ENSGT00940000160526.j #12 ENSGT00940000156615.a.e #13 ENSGT00940000154818.e.a.a ENSGT00390000008645.h.b #14 ENSGT00940000158225.i.a.d #15 ENSGT00940000158225.i.a.c.a #15 ENSGT00940000154983.c.b.`b.a #16 ENSGT00940000160124.c #17 ENSGT00950000182999.b.a.a.m #18 ENSGT00390000005378.i #19 ENSGT00940000166611.d.a #20 ENSGT00950000182885.B.c #21 ENSGT00950000182885.C.b.e #22 ENSGT00390000010777.i #23 ENSGT00390000006088.j #24 ENSGT00390000004984.b ENSGT00940000159081.s.b.b.a #26 ENSGT00390000014084.f ENSGT01030000234578.B.a.h ENSGT01030000234578.B.a.g.b ENSGT00390000006747.o ENSGT00950000183117.a.a.g ENSGT00940000158254.e ENSGT00940000155067.b.a.c ENSGT00940000155067.a.y ENSGT00650000094663.a ENSGT00390000002730.e.b.d ENSGT00940000160161.e.a.m.b.b Atlantic salmon MODERN SPECIES 8 TMCC3 (ENSSSAG00000058679) #7 ndufa12 (ENSSSAG00000058636) #8 fgd6 (ENSSSAG00000058619) vezt (ENSSSAG00000048666) #10 METAP2 (ENSSSAG00000057759) #11 USP44 (ENSSSAG00000057743) #12 ENSSSAG00000057693 ENSSSAG00000057684 #14 ENSSSAG00000057672 #15 ENSSSAG00000083161 #16 klhl42 (ENSSSAG00000085425) #17 ENSSSAG00000055824 #18 itfg2 (ENSSSAG00000055802) #19 ENSSSAG00000095127 #20 pah (ENSSSAG00000097520) #21 th2 (ENSSSAG00000052064) #22 nup37 (ENSSSAG00000051940) #23 parpbp (ENSSSAG00000051930) #24 pmch (ENSSSAG00000086642) igf1 (ENSSSAG00000108388) #26 washc3 (ENSSSAG00000051495) dram1 (ENSSSAG00000051485) dram1 (ENSSSAG00000051450) gnptab (ENSSSAG00000050497) chpt1 (ENSSSAG00000105474) mybpc1 (ENSSSAG00000047323) spic (ENSSSAG00000082209) ENSSSAG00000047278 VATE1 (ENSSSAG00000047230) GALNT8 (ENSSSAG00000104480) GALNT8 (ENSSSAG00000002843) River trout MODERN SPECIES 34 ndufa12 (ENSSTUG00000028522) #8 fgd6 (ENSSTUG00000028540) vezt (ENSSTUG00000030021) #10 METAP2 (ENSSTUG00000030056) #11 usp44 (ENSSTUG00000030162) #12 ntn4 (ENSSTUG00000030191) #13 snrpf (ENSSTUG00000030214) amdhd1 (ENSSTUG00000030241) #14 tspan9b (ENSSTUG00000030251) #15 ENSSTUG00000030347 #16 klhl42 (ENSSTUG00000033104) #17 nrip2 (ENSSTUG00000033130) #18 itfg2 (ENSSTUG00000033136) #19 ascl1a (ENSSTUG00000033213) #20 pah (ENSSTUG00000033266) #21 th2 (ENSSTUG00000035615) #22 nup37 (ENSSTUG00000035950) #23 parpbp (ENSSTUG00000036036) #24 ENSSTUG00000036045 #25 igf1 (ENSSTUG00000036076) #26 washc3 (ENSSTUG00000036582) dram1 (ENSSTUG00000036604) dram1 (ENSSTUG00000036613) gnptab (ENSSTUG00000036683) chpt1 (ENSSTUG00000038494) mybpc1 (ENSSTUG00000038581) ENSSTUG00000042770 spic (ENSSTUG00000042777) ENSSTUG00000042791 atp6v1e1b (ENSSTUG00000042807) GALNT8 (ENSSTUG00000042923) Oncorhynchus ANCESTRAL SPECIES 22 ENSGT00940000156334.a.b.c ENSGT00390000003290.h.a.b #10 ENSGT00940000155016.cb #11 ENSGT00940000160526.j #12 ENSGT00940000156615.a.e #13 ENSGT00940000154818.e.a.b ENSGT00940000164757.a ENSGT00390000008645.h.b #14 ENSGT00940000158225.i.a.c.a #15 ENSGT00940000154983.c.b.`b.a #16 ENSGT00940000160124.c #17 ENSGT00950000182999.b.a.a.n #18 ENSGT00390000005378.i #19 ENSGT00940000166611.c #20 ENSGT00950000182885.B.c #21 ENSGT00950000182885.C.b.e #22 ENSGT00390000010777.i #23 ENSGT00390000006088.j #24 ENSGT00940000168896.c #25 ENSGT00940000159081.s.b.a.b #26 ENSGT00390000014084.f ENSGT01030000234578.B.a.h ENSGT01030000234578.B.a.g.b ENSGT00390000006747.o ENSGT00950000183117.a.a.g ENSGT00940000158254.e ENSGT00940000155067.b.a.d.a ENSGT00940000155067.a.y ENSGT00650000094663.a ENSGT00390000002730.e.b.d ENSGT00950000183113.b.b.c.b.l Oncorhynchus_a ANCESTRAL SPECIES 31 ENSGT00390000005848.gb #8 ENSGT00940000156334.a.b.c ENSGT00390000003290.h.a.b #10 ENSGT00940000155016.cb #11 ENSGT00940000160526.j #12 ENSGT00940000156615.a.e #13 ENSGT00940000154818.e.a.b ENSGT00940000164757.a ENSGT00390000008645.h.b #14 ENSGT00940000158225.i.a.c.a #15 ENSGT00940000154983.c.b.`b.a #16 ENSGT00940000160124.c #17 ENSGT00950000182999.b.a.a.n #18 ENSGT00940000166611.c #20 ENSGT00950000182885.B.c #21 ENSGT00950000182885.C.b.e #22 ENSGT00390000010777.i #23 ENSGT00390000006088.j #24 ENSGT00940000168896.c #25 ENSGT00940000159081.s.b.a.b #26 ENSGT00390000014084.f ENSGT01030000234578.B.a.h ENSGT01030000234578.B.a.g.b ENSGT00390000006747.o ENSGT00950000183117.a.a.g ENSGT00940000158254.e ENSGT00940000155067.b.a.d.a ENSGT00940000155067.a.y ENSGT00650000094663.a ENSGT00390000002730.e.b.d ENSGT00950000183113.b.b.c.b.l Coho salmon MODERN SPECIES 10 ENSOKIG00005044664 TMCC3 (ENSOKIG00005044677) #7 ndufa12 (ENSOKIG00005044702) #8 fgd6 (ENSOKIG00005044715) vezt (ENSOKIG00005044744) #10 metap2b (ENSOKIG00005044856) #11 USP44 (ENSOKIG00005044906) #12 ntn4 (ENSOKIG00005044958) #13 SNRPF (ENSOKIG00005044976) TSPAN9 (ENSOKIG00005044982) #15 ELAPOR2 (ENSOKIG00005045125) #16 klhl42 (ENSOKIG00005046905) #17 nrip2 (ENSOKIG00005046907) #18 ascl1a (ENSOKIG00005046911) #20 pah (ENSOKIG00005046957) #21 th2 (ENSOKIG00005047286) #22 nup37 (ENSOKIG00005047492) #23 parpbp (ENSOKIG00005047532) #24 ENSOKIG00005047543 #25 IGF1 (ENSOKIG00005047564) #26 washc3 (ENSOKIG00005047599) dram1 (ENSOKIG00005047623) dram1 (ENSOKIG00005047637) gnptab (ENSOKIG00005047672) chpt1 (ENSOKIG00005047866) mybpc1 (ENSOKIG00005047917) ENSOKIG00005048072 spic (ENSOKIG00005048078) ENSOKIG00005048080 ENSOKIG00005048086 ENSOKIG00005048100 Chinook salmon MODERN SPECIES 8 ENSOTSG00005010308 TMCC3 (ENSOTSG00005010306) #7 ndufa12 (ENSOTSG00005010305) #8 vezt (ENSOTSG00005010304) #10 metap2b (ENSOTSG00005010282) #11 usp44 (ENSOTSG00005010279) #12 ntn4 (ENSOTSG00005010278) #13 ENSOTSG00005010277 ENSOTSG00005010276 #14 tspan9b (ENSOTSG00005010275) #15 ELAPOR2 (ENSOTSG00005005653) #16 klhl42 (ENSOTSG00005005638) #17 nrip2 (ENSOTSG00005005637) #18 ascl1a (ENSOTSG00005005636) #20 pah (ENSOTSG00005005614) #21 th2 (ENSOTSG00005005358) #22 nup37 (ENSOTSG00005005034) #23 parpbp (ENSOTSG00005005028) #24 ENSOTSG00005005025 #25 igf1 (ENSOTSG00005004895) #26 washc3 (ENSOTSG00005004891) dram1 (ENSOTSG00005004876) gnptab (ENSOTSG00005004308) chpt1 (ENSOTSG00005004253) mybpc1 (ENSOTSG00005004130) ENSOTSG00005004126 ENSOTSG00005004125 spic (ENSOTSG00005004124) atp6v1e1b (ENSOTSG00005004117) ENSOTSG00005004113 ENSOTSG00005004111 Rainbow trout MODERN SPECIES 6 fgd6 (ENSOMYG00000005679) vezt (ENSOMYG00000005518) #10 METAP2 (ENSOMYG00000005237) #11 ENSOMYG00000005172 USP44 (ENSOMYG00000005148) #12 NTN4 (ENSOMYG00000005059) #13 ENSOMYG00000042368 tsn9 (ENSOMYG00000042359) #15 ENSOMYG00000040026 #16 klhl42 (ENSOMYG00000039478) #17 ENSOMYG00000039459 #18 ENSOMYG00000066274 itfg2 (ENSOMYG00000039401) #19 ENSOMYG00000051961 #20 pah (ENSOMYG00000039070) #21 th2 (ENSOMYG00000038993) #22 nup37 (ENSOMYG00000038812) #23 parpbp (ENSOMYG00000038733) #24 ENSOMYG00000038696 #25 IGF1 (ENSOMYG00000038605) #26 washc3 (ENSOMYG00000038443) ENSOMYG00000052568 dram1 (ENSOMYG00000038520) gnptab (ENSOMYG00000037960) chpt1 (ENSOMYG00000037683) mybpc1 (ENSOMYG00000037520) ENSOMYG00000037425 spic (ENSOMYG00000037414) atp6v1e1b (ENSOMYG00000037393) ENSOMYG00000037379 ENSOMYG00000065117 Huchen MODERN SPECIES 168 ndufa12 (ENSHHUG00000018016) #8 ENSHHUG00000018029 #10 ENSHHUG00000018033 #10 METAP2 (ENSHHUG00000018038) #11 usp44 (ENSHHUG00000018429) #12 ntn4 (ENSHHUG00000018470) #13 snrpf (ENSHHUG00000018483) amdhd1 (ENSHHUG00000018661) #14 tspan9b (ENSHHUG00000018670) #15 ENSHHUG00000018711 #16 klhl42 (ENSHHUG00000018789) #17 itfg2 (ENSHHUG00000018797) #19 nrip2 (ENSHHUG00000018932) #18 ascl1a (ENSHHUG00000018939) #20 pah (ENSHHUG00000018953) #21 th2 (ENSHHUG00000019771) #22 nup37 (ENSHHUG00000019915) #23 parpbp (ENSHHUG00000020016) #24 pmch (ENSHHUG00000020021) igf1 (ENSHHUG00000020076) #26 washc3 (ENSHHUG00000020822) dram1 (ENSHHUG00000020829) GNPTAB (ENSHHUG00000020855) chpt1 (ENSHHUG00000020874) mybpc1 (ENSHHUG00000020917) atp6v1e1b (ENSHHUG00000022007) spic (ENSHHUG00000022035) ADA2 (ENSHHUG00000022050) GALNT8 (ENSHHUG00000022068) DYRK4 (ENSHHUG00000022276) rad51ap1 (ENSHHUG00000022304) Salmoninae ANCESTRAL SPECIES 645 ENSGT00940000166611.c #20 ENSGT00950000182885.B.c #21 ENSGT00950000182885.C.b.f #22 ENSGT00390000010777.j #23 ENSGT00390000006088.i #24 ENSGT00390000004984.b ENSGT00940000159081.s.b.b.a #26 ENSGT00390000014084.f ENSGT01030000234578.B.a.g.b ENSGT00950000183117.a.a.g ENSGT00940000158254.e ENSGT00940000155067.b.a ENSGT00940000155067.a.y ENSGT00390000002730.e.b.d Salmoninae_a ANCESTRAL SPECIES 75 ENSGT00390000005848.fb #8 ENSGT00940000156334.a.b.d ENSGT00390000003290.h.a.a #10 ENSGT00940000155016.bb #11 ENSGT00940000160526.i #12 ENSGT00940000156615.a.f #13 ENSGT00940000154818.e.a.b ENSGT00390000008645.h.a #14 ENSGT00940000158225.i.a.c.b #15 ENSGT00940000154983.c.b.`b.b #16 ENSGT00940000160124.d #17 ENSGT00950000182999.b.a.a.m #18 ENSGT00390000005378.j #19 ENSGT00940000166611.d.b #20 ENSGT00950000182885.B.d #21 ENSGT00950000182885.C.b.f #22 ENSGT00390000010777.j #23 ENSGT00390000006088.i #24 ENSGT00940000168896.d #25 ENSGT00940000159081.s.b.a #26 ENSGT00390000014084.e ENSGT01030000234578.B.a.g.a.b ENSGT00390000006747.p ENSGT00950000183117.a.a.h ENSGT00940000158254.f ENSGT00940000155067.b.a.d.b ENSGT00940000155067.a.z ENSGT00650000094663.b ENSGT00390000002730.e.b.c ENSGT00950000183113.b.b.c.b.k ENSGT00940000160161.e.a.m.a Salmo ANCESTRAL SPECIES 25 ENSGT00390000005848.fb #8 ENSGT00940000156334.a.b.d ENSGT00390000003290.h.b #10 ENSGT00940000155016.bb #11 ENSGT00940000160526.i #12 ENSGT00940000156615.a.f #13 ENSGT00940000154818.e.a.b ENSGT00390000008645.h.a #14 ENSGT00940000158225.i.a.c.b #15 ENSGT00940000154983.c.b.`b.b #16 ENSGT00940000160124.d #17 ENSGT00950000182999.b.a.a.n #18 ENSGT00390000005378.j #19 ENSGT00940000166611.d.b #20 ENSGT00950000182885.B.d #21 ENSGT00950000182885.C.b.f #22 ENSGT00390000010777.j #23 ENSGT00390000006088.i #24 ENSGT00940000168896.d #25 ENSGT00940000159081.s.b.b.b #26 ENSGT00390000014084.e ENSGT01030000234578.B.a.g.a.b ENSGT00390000006747.p ENSGT00950000183117.a.a.h ENSGT00940000158254.f ENSGT00940000155067.b.a.d.b ENSGT00940000155067.a.z ENSGT00650000094663.b ENSGT00390000002730.e.b.c ENSGT00950000183113.b.b.c.b.k ENSGT00940000160161.e.a.m.a.d River trout MODERN SPECIES 38 ndufa12 (ENSSTUG00000027092) #8 fgd6 (ENSSTUG00000027008) vezt (ENSSTUG00000026912) #10 metap2b (ENSSTUG00000026865) #11 usp44 (ENSSTUG00000026836) #12 ntn4 (ENSSTUG00000026832) #13 snrpf (ENSSTUG00000026820) amdhd1 (ENSSTUG00000026807) #14 tspan9b (ENSSTUG00000026783) #15 ELAPOR2 (ENSSTUG00000023331) #16 klhl42 (ENSSTUG00000023234) #17 ENSSTUG00000023224 nrip2 (ENSSTUG00000023213) #18 itfg2 (ENSSTUG00000023113) #19 ascl1a (ENSSTUG00000023105) #20 th2 (ENSSTUG00000021251) #22 nup37 (ENSSTUG00000020911) #23 parpbp (ENSSTUG00000020858) #24 ENSSTUG00000020854 #25 igf1 (ENSSTUG00000020604) #26 washc3 (ENSSTUG00000020568) dram1 (ENSSTUG00000020559) gnptab (ENSSTUG00000019408) chpt1 (ENSSTUG00000019195) mybpc1 (ENSSTUG00000018454) ENSSTUG00000018414 spic (ENSSTUG00000018410) ENSSTUG00000018398 atp6v1e1b (ENSSTUG00000018380) ADA2 (ENSSTUG00000018295) GALNT8 (ENSSTUG00000018260) Atlantic salmon MODERN SPECIES 26 ENSSSAG00000048798 TMCC3 (ENSSSAG00000106228) #7 nduac (ENSSSAG00000048771) #8 fgd6 (ENSSSAG00000048712) vezt (ENSSSAG00000058593) #10 METAP2 (ENSSSAG00000048649) #11 USP44 (ENSSSAG00000048637) #12 SNRPF (ENSSSAG00000105295) ENSSSAG00000048610 #14 ENSSSAG00000107602 #15 ENSSSAG00000111243 #16 ENSSSAG00000096376 #17 ENSSSAG00000046203 #18 ENSSSAG00000119071 #20 pah (ENSSSAG00000045956) #21 th2 (ENSSSAG00000045042) #22 nup37 (ENSSSAG00000044831) #23 parpbp (ENSSSAG00000044750) #24 ENSSSAG00000107811 #25 ENSSSAG00000081749 ENSSSAG00000120885 IGF1 (ENSSSAG00000044375) #26 washc3 (ENSSSAG00000044345) dram1 (ENSSSAG00000044327) gnptab (ENSSSAG00000043341) chpt1 (ENSSSAG00000089632) mybpc1 (ENSSSAG00000003533) ENSSSAG00000002961 spic (ENSSSAG00000002954) ENSSSAG00000002945 atp6v1e1b (ENSSSAG00000116109) Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00390000005848.fb #8 ENSGT00940000156334.a.b.d ENSGT00390000003290.h.a.a #10 ENSGT00940000155016.bb #11 ENSGT00940000160526.i #12 ENSGT00940000156615.a.f #13 ENSGT00940000154818.e.a.a ENSGT00390000008645.h.a #14 ENSGT00940000158225.i.a.c.b #15 ENSGT00940000154983.c.b.`b.b #16 ENSGT00940000160124.d #17 ENSGT00950000182999.b.a.a.m #18 ENSGT00390000005378.j #19 ENSGT00940000166611.d.b #20 ENSGT00950000182885.B.d.b #21 ENSGT00950000182885.C.b.f #22 ENSGT00390000010777.j #23 ENSGT00390000006088.i #24 ENSGT00940000168896.d #25 ENSGT00940000159081.s.b.a.a #26 ENSGT00390000014084.e ENSGT01030000234578.B.a.g.a.b ENSGT00390000006747.p ENSGT00950000183117.a.a.h ENSGT00940000158254.f ENSGT00940000155067.b.a.d.b ENSGT00940000155067.a.z ENSGT00650000094663.b ENSGT00390000002730.e.b.c ENSGT00950000183113.b.b.c.b.k ENSGT00940000160161.e.a.m.a.a Oncorhynchus_a ANCESTRAL SPECIES 64 ENSGT00390000005848.fb #8 ENSGT00940000156334.a.b.d ENSGT00390000003290.h.a.a #10 ENSGT00940000155016.bb #11 ENSGT00940000160526.i #12 ENSGT00940000156615.a.f #13 ENSGT00940000164757.b ENSGT00390000008645.h.a #14 ENSGT00940000158225.i.a.c.b #15 ENSGT00940000154983.c.b.`b.b #16 ENSGT00940000160124.d #17 ENSGT00950000182999.b.a.a.m #18 ENSGT00390000005378.j #19 ENSGT00940000166611.d.b #20 ENSGT00950000182885.B.d.b #21 ENSGT00950000182885.C.b.f #22 ENSGT00390000010777.j #23 ENSGT00390000006088.i #24 ENSGT00940000168896.d #25 ENSGT00940000159081.s.b.a.a #26 ENSGT00390000014084.e ENSGT01030000234578.B.a.g.a.b ENSGT00390000006747.p ENSGT00950000183117.a.a.h ENSGT00940000158254.f ENSGT00940000155067.b.a.d.b ENSGT00940000155067.a.z ENSGT00650000094663.b ENSGT00390000002730.e.b.c ENSGT00950000183113.b.b.c.b.k ENSGT00940000160161.e.a.m.a.a Coho salmon MODERN SPECIES 29 ndufa12 (ENSOKIG00005021416) #8 fgd6 (ENSOKIG00005021469) vezt (ENSOKIG00005022027) #10 METAP2 (ENSOKIG00005022135) #11 usp44 (ENSOKIG00005022428) #12 NTN4 (ENSOKIG00005022451) #13 ENSOKIG00005022464 amdhd1 (ENSOKIG00005022484) #14 tspan9b (ENSOKIG00005022504) #15 ELAPOR2 (ENSOKIG00005022714) #16 klhl42 (ENSOKIG00005023710) #17 ENSOKIG00005023729 #18 itfg2 (ENSOKIG00005023741) #19 ENSOKIG00005023760 #20 pah (ENSOKIG00005023911) #21 th2 (ENSOKIG00005025899) #22 nup37 (ENSOKIG00005026624) #23 parpbp (ENSOKIG00005026715) #24 ENSOKIG00005026748 #25 igf1 (ENSOKIG00005026794) #26 washc3 (ENSOKIG00005027115) dram1 (ENSOKIG00005027146) gnptab (ENSOKIG00005027296) chpt1 (ENSOKIG00005029016) mybpc1 (ENSOKIG00005029297) ENSOKIG00005030650 spic (ENSOKIG00005030681) ENSOKIG00005030692 atp6v1e1b (ENSOKIG00005030717) ADA2 (ENSOKIG00005030751) GALNT8 (ENSOKIG00005030969) Chinook salmon MODERN SPECIES 6 syt1a (ENSOTSG00005002082) #35 ndufa12 (ENSOTSG00005002087) #8 vezt (ENSOTSG00005002095) #10 METAP2 (ENSOTSG00005002179) #11 usp44 (ENSOTSG00005002893) #12 ntn4 (ENSOTSG00005002894) #13 ENSOTSG00005002904 amdhd1 (ENSOTSG00005002912) #14 tspan9b (ENSOTSG00005002932) #15 ELAPOR2 (ENSOTSG00005002955) #16 klhl42 (ENSOTSG00005003230) #17 nrip2 (ENSOTSG00005003233) #18 itfg2 (ENSOTSG00005003235) #19 ascl1a (ENSOTSG00005003242) #20 pah (ENSOTSG00005003250) #21 th2 (ENSOTSG00005003334) #22 nup37 (ENSOTSG00005005743) #23 ENSOTSG00005005772 #25 igf1 (ENSOTSG00005005780) #26 washc3 (ENSOTSG00005006733) dram1 (ENSOTSG00005006735) gnptab (ENSOTSG00005006744) ENSOTSG00005007558 chpt1 (ENSOTSG00005007562) mybpc1 (ENSOTSG00005007586) ENSOTSG00005007587 spic (ENSOTSG00005007588) ENSOTSG00005007590 atp6v1e1b (ENSOTSG00005007592) ADA2 (ENSOTSG00005007597) GALNT8 (ENSOTSG00005007620) Rainbow trout MODERN SPECIES 13 USP44 (ENSOMYG00000016335) #12 ENSOMYG00000066266 ENSOMYG00000051830 ENSOMYG00000061312 ntn4 (ENSOMYG00000016346) #13 ruxf (ENSOMYG00000016386) amdhd1 (ENSOMYG00000016400) #14 ENSOMYG00000068698 ENSOMYG00000016413 #15 ENSOMYG00000016472 #16 klhl42 (ENSOMYG00000017202) #17 ENSOMYG00000017211 #18 itfg2 (ENSOMYG00000017221) #19 ENSOMYG00000017228 #20 pah (ENSOMYG00000017392) #21 th2 (ENSOMYG00000022464) #22 nup37 (ENSOMYG00000023359) #23 ENSOMYG00000023418 #25 igf1 (ENSOMYG00000023593) #26 ENSOMYG00000023901 dram1 (ENSOMYG00000023912) gnptab (ENSOMYG00000024139) chpt1 (ENSOMYG00000024956) mybpc1 (ENSOMYG00000025349) spic (ENSOMYG00000026260) ENSOMYG00000026269 atp6v1e1b (ENSOMYG00000026302) ENSOMYG00000026324 GALNT8 (ENSOMYG00000026382) GALNT8 (ENSOMYG00000026443) DYRK4 (ENSOMYG00000005829) Huchen MODERN SPECIES 4923 pah (ENSHHUG00000039234) #21 th2 (ENSHHUG00000039203) #22 nup37 (ENSHHUG00000039186) #23 parpbp (ENSHHUG00000039174) #24 ENSHHUG00000039154 #25 Northern pike MODERN SPECIES 22 fgd6 (ENSELUG00000003018) vezt (ENSELUG00000000094) #10 metap2b (ENSELUG00000003080) #11 usp44 (ENSELUG00000003098) #12 ntn4 (ENSELUG00000003115) #13 ENSELUG00000026262 snrpf (ENSELUG00000003121) amdhd1 (ENSELUG00000001354) #14 tspan9b (ENSELUG00000003152) #15 elapor2b (ENSELUG00000003204) #16 klhl42 (ENSELUG00000003220) #17 nrip2 (ENSELUG00000003231) #18 itfg2 (ENSELUG00000003251) #19 ascl1a (ENSELUG00000003258) #20 pah (ENSELUG00000003301) #21 th2 (ENSELUG00000003327) #22 nup37 (ENSELUG00000003359) #23 parpbp (ENSELUG00000003382) #24 ENSELUG00000003396 #25 igf1 (ENSELUG00000003410) #26 washc3 (ENSELUG00000001180) dram1 (ENSELUG00000003450) gnptab (ENSELUG00000003506) chpt1 (ENSELUG00000003556) mybpc1 (ENSELUG00000003611) ENSELUG00000003623 spic (ENSELUG00000003655) atp6v1e1b (ENSELUG00000003707) ADA2 (ENSELUG00000001244) GALNT8 (ENSELUG00000003855) DYRK4 (ENSELUG00000003899) Otomorpha ANCESTRAL SPECIES 258 ENSGT00940000155915.b ENSGT00940000155419.c.b ENSGT00940000154738.a.r ENSGT00390000003444 ENSGT01050000244882.b.d ENSGT00940000156246.c.b ENSGT00940000155067.a ENSGT00940000155067.b.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00390000014084 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 Clupeiformes ANCESTRAL SPECIES 32 ENSGT00390000005903 ENSGT00390000006837 ENSGT00710000106806.r ENSGT00940000159247 ENSGT00940000155461.A ENSGT00940000156715 ENSGT00940000157926 ENSGT01030000235060 ENSGT01010000222533 ENSGT00530000064318 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000159081 #26 ENSGT00390000004094 ENSGT01030000234550.a.a.d.a.b ENSGT00940000166253.a ENSGT00390000018424 ENSGT00390000002796 ENSGT00940000157659 ENSGT00940000158094 ENSGT00940000154318.A.a ENSGT00940000157502 ENSGT00440000039984.b ENSGT00940000158420 ENSGT00940000159226 Atlantic herring MODERN SPECIES 7 pdzrn4 (ENSCHAG00000024743) cntn1b (ENSCHAG00000024773) nrcama (ENSCHAG00000025303) PNPLA8 (ENSCHAG00000000806) ENSCHAG00000001323 avpr2l (ENSCHAG00000001340) ENSCHAG00000001371 dnajb9b (ENSCHAG00000001383) spic (ENSCHAG00000001413) ENSCHAG00000001449 mybpc1 (ENSCHAG00000001488) chpt1 (ENSCHAG00000001746) gnptab (ENSCHAG00000002251) ascl1a (ENSCHAG00000004363) #20 pah (ENSCHAG00000004474) #21 th2 (ENSCHAG00000007002) #22 nup37 (ENSCHAG00000009289) #23 parpbp (ENSCHAG00000009532) #24 ENSCHAG00000009539 igf1 (ENSCHAG00000009555) #26 coa6 (ENSCHAG00000009656) slc13a4 (ENSCHAG00000009672) zgc:162331 (ENSCHAG00000009948) ENSCHAG00000009993 ssbp1 (ENSCHAG00000010015) creb3l2 (ENSCHAG00000010107) ENSCHAG00000010441 ENSCHAG00000011733 RASSF3 (ENSCHAG00000011742) zgc:194209 (ENSCHAG00000011759) zgc:194209 (ENSCHAG00000011799) Denticle herring MODERN SPECIES 6 kin (ENSDCDG00000032200) atp5f1c (ENSDCDG00000032205) taf3 (ENSDCDG00000032211) gata3 (ENSDCDG00000032213) gata3 (ENSDCDG00000032219) celf2 (ENSDCDG00000032264) usp6nl (ENSDCDG00000021682) ECHDC3 (ENSDCDG00000021695) ENSDCDG00000021697 UPF2 (ENSDCDG00000021705) klhl42 (ENSDCDG00000021728) #17 nrip2 (ENSDCDG00000021735) #18 itfg2 (ENSDCDG00000021745) #19 ascl1a (ENSDCDG00000021754) #20 pah (ENSDCDG00000021796) #21 th2 (ENSDCDG00000022614) #22 nup37 (ENSDCDG00000022874) #23 parpbp (ENSDCDG00000022875) #24 igf1 (ENSDCDG00000022878) #26 coa6 (ENSDCDG00000022880) slc13a4 (ENSDCDG00000022887) zgc:162331 (ENSDCDG00000022894) ENSDCDG00000022895 ssbp1 (ENSDCDG00000022896) creb3l2 (ENSDCDG00000022900) DGKI (ENSDCDG00000023066) ENSDCDG00000027431 RASSF3 (ENSDCDG00000027433) zgc:194209 (ENSDCDG00000027436) gnsa (ENSDCDG00000027447) TBC1D30 (ENSDCDG00000027959) Otophysi ANCESTRAL SPECIES 162 ENSGT00940000156246.c.b ENSGT00940000155067.a ENSGT00940000155067.b.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00390000014084 ENSGT00940000156000 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000157013 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 Characiphysae ANCESTRAL SPECIES 15 ENSGT00990000205397 ENSGT00940000160568 ENSGT00390000016313.a.a ENSGT00510000047602 ENSGT00940000154527.a.a.b.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT01100000264068 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00940000157013 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00390000004708 ENSGT00530000063722.a ENSGT00390000009532.A.d.a ENSGT00940000156122 ENSGT00950000182939.b.a.b ENSGT00940000155197 ENSGT00940000154098.a.f ENSGT00390000008708.h.b ENSGT00940000153525.j ENSGT00940000178181 ENSGT00390000018612.a.b Characiphysae_b ANCESTRAL SPECIES 47 ENSGT00940000162238.a.b ENSGT00990000205397 ENSGT00940000160568 ENSGT00390000016313.a.a ENSGT00510000047602 ENSGT00940000154527.a.a.b.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00940000157013 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00390000004708 ENSGT00530000063722.a ENSGT00390000009532.A.d.a ENSGT00940000156122 ENSGT00950000182939.b.a.b ENSGT00940000155197 ENSGT00940000154098.a.f ENSGT00390000008708.h.b ENSGT00940000153525.j ENSGT00940000178181 ENSGT00390000018612.a.b Characoidei ANCESTRAL SPECIES 37 ENSGT00940000162238.a.b ENSGT00990000205397 ENSGT00940000160568 ENSGT00390000016313.a.a ENSGT00510000047602 ENSGT00940000154527.a.a.b.a ENSGT00640000091774.b ENSGT00940000157574 ENSGT00940000158968 ENSGT00940000158177.b ENSGT00940000158382 ENSGT00940000167455 ENSGT00940000157013 ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00390000004708 ENSGT00530000063722.a ENSGT00390000009532.A.d.a ENSGT00940000156122 ENSGT00950000182939.b.a.b ENSGT00940000155197 ENSGT00940000154098.a.f ENSGT00390000008708.h.b ENSGT00940000153525.j ENSGT00940000178181 ENSGT00390000018612.a.b Red-bellied piranha MODERN SPECIES 252 pah (ENSPNAG00000015353) #21 th2 (ENSPNAG00000015389) #22 nup37 (ENSPNAG00000015433) #23 parpbp (ENSPNAG00000015453) #24 igf1 (ENSPNAG00000015503) #26 dnai7 (ENSPNAG00000003397) lrmp (ENSPNAG00000015759) bcat1 (ENSPNAG00000015906) sox5 (ENSPNAG00000015951) ETNK1 (ENSPNAG00000015968) strap (ENSPNAG00000015992) tmpoa (ENSPNAG00000016012) slc25a3a (ENSPNAG00000016036) ldhba (ENSPNAG00000016075) ENSPNAG00000016085 gys2 (ENSPNAG00000016191) spx (ENSPNAG00000016301) Mexicana tetra MODERN SPECIES 22 ENSAMXG00000039051 ucn3l (ENSAMXG00000026268) copg2 (ENSAMXG00000014507) mest (ENSAMXG00000014467) ENSAMXG00000014383 si:dkeyp-38g8.5 (ENSAMXG00000032782) ENSAMXG00000035316 epyc (ENSAMXG00000043869) kera (ENSAMXG00000040306) lum (ENSAMXG00000044012) dcn (ENSAMXG00000034015) ENSAMXG00000040736 recql (ENSAMXG00000014249) ascl1a (ENSAMXG00000014210) #20 pah (ENSAMXG00000014191) #21 th2 (ENSAMXG00000014162) #22 nup37 (ENSAMXG00000014143) #23 parpbp (ENSAMXG00000042706) #24 pmch (ENSAMXG00000039489) igf1 (ENSAMXG00000041766) #26 dnai7 (ENSAMXG00000011849) lrmp (ENSAMXG00000040185) bcat1 (ENSAMXG00000031048) ENSAMXG00000042309 sox5 (ENSAMXG00000007582) ETNK1 (ENSAMXG00000030526) strap (ENSAMXG00000040833) tmpoa (ENSAMXG00000035195) slc25a3a (ENSAMXG00000007625) ldhba (ENSAMXG00000007636) ENSAMXG00000033794 Electric eel MODERN SPECIES 395 si:dkeyp-38g8.5 (ENSEEEG00000014029) EPYC (ENSEEEG00000014028) lum (ENSEEEG00000014027) dcn (ENSEEEG00000014022) ENSEEEG00000014021 recql (ENSEEEG00000013926) ascl1a (ENSEEEG00000013916) #20 pah (ENSEEEG00000013909) #21 th2 (ENSEEEG00000013889) #22 nup37 (ENSEEEG00000013887) #23 parpbp (ENSEEEG00000013885) #24 ENSEEEG00000013884 igf1 (ENSEEEG00000013869) #26 dnai7 (ENSEEEG00000013868) lrmp (ENSEEEG00000013866) bcat1 (ENSEEEG00000013864) ENSEEEG00000013862 Channel catfish MODERN SPECIES 10 ENSIPUG00000023310 ENSIPUG00000023312 copg2 (ENSIPUG00000023318) mest (ENSIPUG00000023349) ATP2B1 (ENSIPUG00000023366) si:dkeyp-38g8.5 (ENSIPUG00000023412) epyc (ENSIPUG00000023424) ENSIPUG00000023434 kera (ENSIPUG00000023439) LUM (ENSIPUG00000023446) DCN (ENSIPUG00000023448) ENSIPUG00000024089 recql (ENSIPUG00000024092) ascl1a (ENSIPUG00000024104) #20 Pah (ENSIPUG00000024106) #21 th2 (ENSIPUG00000024111) #22 ENSIPUG00000024115 nup37 (ENSIPUG00000024118) #23 parpbp (ENSIPUG00000024120) #24 ENSIPUG00000024121 igf1 (ENSIPUG00000024122) #26 casc1 (ENSIPUG00000024123) lrmp (ENSIPUG00000024125) bcat1 (ENSIPUG00000024129) ENSIPUG00000024130 ENSIPUG00000024131 ENSIPUG00000024133 sox5 (ENSIPUG00000024134) ETNK1 (ENSIPUG00000024137) strap (ENSIPUG00000024138) tmpoa (ENSIPUG00000024139) Cyprinoidei ANCESTRAL SPECIES 28 ENSGT00940000156246.c.b ENSGT00940000155067.a ENSGT00940000155067.b.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00390000014084 ENSGT00940000156000 ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a #18 ENSGT00390000005378 #19 ENSGT00940000157013 ENSGT00940000166611 #20 ENSGT00950000182885.B.e #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00390000004984.b ENSGT00940000159081 #26 ENSGT00940000165254.c.b ENSGT00390000009532.A.d.a ENSGT00530000063722.a ENSGT00390000004708 ENSGT00940000156122 ENSGT00950000182939.b.a.b ENSGT00940000155197 ENSGT00940000154098.a.f ENSGT00390000008708.h.b ENSGT00940000153525.j ENSGT00540000073481 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 2 ENSGT00940000156246.c.b.b ENSGT00940000155067.a.u ENSGT00940000155067.b.a.a ENSGT00940000158254.c ENSGT00950000183117.a.a.i ENSGT00390000006747.n ENSGT01030000234578.B.a.a ENSGT00390000014084.g ENSGT00940000156000.b ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a.i #18 ENSGT00390000005378 #19 ENSGT00940000157013.n ENSGT00940000166611.a #20 ENSGT00950000182885.B.e #21 ENSGT00950000182885.C.b.a #22 ENSGT00390000010777.c #23 ENSGT00390000006088.f #24 ENSGT00390000004984.b ENSGT00940000159081.i.b #26 ENSGT00390000009532.A.d.a.d ENSGT00530000063722.a.db.a ENSGT00390000004708.j ENSGT00940000156122.l ENSGT00950000182939.b.a.b.d ENSGT00940000155197.d ENSGT00940000154098.a.f.b ENSGT00390000008708.h.b.a ENSGT00940000153525.j.b ENSGT00540000073481.a ENSGT00390000018612.a.b.b Goldfish DUPLICATION Goldfish MODERN SPECIES 2239 ascl1a (ENSCARG00000064194) #20 th2 (ENSCARG00000062782) #22 Goldfish MODERN SPECIES 33 avpr2l (ENSCARG00000025186) dnajb9b (ENSCARG00000025200) spic (ENSCARG00000025215) ENSCARG00000025248 gnptab (ENSCARG00000025313) mybpc1 (ENSCARG00000025692) chpt1 (ENSCARG00000028495) dram1 (ENSCARG00000000136) washc3 (ENSCARG00000000151) cwf19l1 (ENSCARG00000000190) klhl42 (ENSCARG00000000223) #17 nrip2 (ENSCARG00000000236) #18 itfg2 (ENSCARG00000000309) #19 recql (ENSCARG00000000390) ascl1a (ENSCARG00000000469) #20 th2 (ENSCARG00000000577) #22 nup37 (ENSCARG00000000985) #23 parpbp (ENSCARG00000001013) #24 pmch (ENSCARG00000001019) igf1 (ENSCARG00000001038) #26 cry1a (ENSCARG00000001071) #31 tnnt2c (ENSCARG00000001100) si:dkey-222f8.3 (ENSCARG00000001106) braf (ENSCARG00000001189) mrps33 (ENSCARG00000001570) tmem178bb (ENSCARG00000001574) cnot4b (ENSCARG00000001594) mkrn1 (ENSCARG00000001631) TMEM121B (ENSCARG00000001638) ENSCARG00000001649 rergla (ENSCARG00000001671) Cyprininae_a ANCESTRAL SPECIES 272 ENSGT00950000182999.b.a.a.i #18 ENSGT00390000005378 #19 ENSGT00940000157013.n ENSGT00940000166611.a #20 ENSGT00950000182885.B.e.a #21 ENSGT00950000182885.C.b.a #22 ENSGT00390000010777.c #23 ENSGT00390000006088.f #24 ENSGT01060000250294.a.b ENSGT00940000159081.i.b #26 ENSGT00390000009532.A.d.a.d ENSGT00530000063722.a.db.a ENSGT00390000004708.j ENSGT00940000156122.l ENSGT00950000182939.b.a.b.d ENSGT00940000155197.d ENSGT00940000154098.a.f.b ENSGT00390000008708.h.b.a ENSGT00540000073481.a ENSGT00390000018612.a.b.b ENSGT00390000012501.b Common carp reference MODERN SPECIES 8 dnajb9b (ENSCCRG00000075779) spic (ENSCCRG00000043304) ENSCCRG00000043300 mybpc1 (ENSCCRG00000042444) chpt1 (ENSCCRG00000065425) gnptab (ENSCCRG00000081071) dram1 (ENSCCRG00000031656) washc3 (ENSCCRG00000057924) cwf19l1 (ENSCCRG00000072222) klhl42 (ENSCCRG00000072652) #17 nrip2 (ENSCCRG00000080548) #18 itfg2 (ENSCCRG00000031745) #19 recql (ENSCCRG00000082435) ascl1a (ENSCCRG00000066242) #20 pah (ENSCCRG00000069781) #21 th2 (ENSCCRG00000000872) #22 nup37 (ENSCCRG00000000856) #23 parpbp (ENSCCRG00000000844) #24 ENSCCRG00000000840 igf1 (ENSCCRG00000081178) #26 bcat1 (ENSCCRG00000000792) lrmp (ENSCCRG00000000772) sox5 (ENSCCRG00000051929) ENSCCRG00000051919 strap (ENSCCRG00000041679) tmpoa (ENSCCRG00000041684) slc25a3a (ENSCCRG00000055713) kiss2 (ENSCCRG00000065809) ENSCCRG00000039329 GYS2 (ENSCCRG00000000240) spx (ENSCCRG00000063651) Golden-line barbel MODERN SPECIES 7 dnajb9b (ENSSGRG00000038441) spic (ENSSGRG00000038440) ENSSGRG00000038439 mybpc1 (ENSSGRG00000037925) chpt1 (ENSSGRG00000037889) gnptab (ENSSGRG00000037804) dram1 (ENSSGRG00000037800) washc3 (ENSSGRG00000037799) cwf19l1 (ENSSGRG00000037766) klhl42 (ENSSGRG00000037765) #17 nrip2 (ENSSGRG00000037763) #18 itfg2 (ENSSGRG00000037761) #19 recql (ENSSGRG00000037728) ascl1a (ENSSGRG00000037726) #20 pah (ENSSGRG00000037725) #21 th2 (ENSSGRG00000037724) #22 nup37 (ENSSGRG00000037720) #23 parpbp (ENSSGRG00000037718) #24 pmch (ENSSGRG00000037717) ENSSGRG00000037716 igf1 (ENSSGRG00000037715) #26 bcat1 (ENSSGRG00000037349) ENSSGRG00000037345 dnai7 (ENSSGRG00000037344) sox5 (ENSSGRG00000035690) ETNK1 (ENSSGRG00000035617) strap (ENSSGRG00000035530) tmpoa (ENSSGRG00000035519) slc25a3a (ENSSGRG00000035517) kiss2 (ENSSGRG00000035516) gys2 (ENSSGRG00000033162) Cyprininae ANCESTRAL SPECIES 44 ENSGT00940000157710.f ENSGT01050000244882.b.d.b ENSGT00940000156246.c.b.a ENSGT00940000155067.a.v ENSGT00940000155067.b.a.b ENSGT00940000158254.d ENSGT00950000183117.a.a.j ENSGT00390000006747.m ENSGT01030000234578.B.a.b ENSGT00390000014084.h ENSGT00940000156000.a ENSGT00950000182999.b.a.a.j #18 ENSGT00940000175478 ENSGT00940000157013.m ENSGT00940000166611.b #20 ENSGT00950000182885.C.b.b #22 ENSGT00390000010777.d #23 ENSGT00390000006088.e #24 ENSGT01060000250294.a.a ENSGT00940000159081.i.a #26 ENSGT00390000009532.A.d.a.c ENSGT00530000063722.a.db.b ENSGT00390000004708.i ENSGT00940000156122.k ENSGT00950000182939.b.a.b.c ENSGT00940000155197.c ENSGT00940000154098.a.f.a ENSGT00390000008708.h.b.b ENSGT00940000153525.j.a ENSGT00540000073481.b ENSGT00390000018612.a.b.a Cyprininae_a ANCESTRAL SPECIES 196 ENSGT00940000156246.c.b.b ENSGT00940000155067.a.u ENSGT00940000155067.b.a.a ENSGT00940000158254.c ENSGT00950000183117.a.a.i ENSGT00390000006747.n ENSGT01030000234578.B.a.a ENSGT00390000014084.g ENSGT00940000156000.b ENSGT00940000160124 #17 ENSGT00950000182999.b.a.a.j #18 ENSGT00940000175478 ENSGT00940000157013.m ENSGT00940000166611.b #20 ENSGT00950000182885.B.e.b #21 ENSGT00950000182885.C.b.b #22 ENSGT00390000010777.d #23 ENSGT00390000006088.e #24 ENSGT00390000004984.b ENSGT00940000159081.i.a #26 ENSGT00390000009532.A.d.a.c ENSGT00530000063722.a.db.b ENSGT00390000004708.i ENSGT00940000156122.k ENSGT00950000182939.b.a.b.c ENSGT00940000155197.c ENSGT00940000154098.a.f.a ENSGT00390000008708.h.b.b ENSGT00940000153525.j.a ENSGT00540000073481.b ENSGT00390000018612.a.b.a Golden-line barbel MODERN SPECIES ENSSGRG00000027228 apaf1 (ENSSGRG00000027225) avpr2l (ENSSGRG00000027223) dnajb9b (ENSSGRG00000027222) spic (ENSSGRG00000027220) ENSSGRG00000027218 mybpc1 (ENSSGRG00000026685) ENSSGRG00000026679 dram1 (ENSSGRG00000026676) washc3 (ENSSGRG00000026674) cwf19l1 (ENSSGRG00000026657) klhl42 (ENSSGRG00000026656) #17 nrip2 (ENSSGRG00000026655) #18 recql (ENSSGRG00000026620) ascl1a (ENSSGRG00000026619) #20 th2 (ENSSGRG00000025558) #22 nup37 (ENSSGRG00000025536) #23 parpbp (ENSSGRG00000025535) #24 pmch (ENSSGRG00000025533) igf1 (ENSSGRG00000025468) #26 bcat1 (ENSSGRG00000025467) lrmp (ENSSGRG00000025462) sox5 (ENSSGRG00000024151) ETNK1 (ENSSGRG00000024131) strap (ENSSGRG00000023756) tmpoa (ENSSGRG00000023753) slc25a3a (ENSSGRG00000023710) ldhba (ENSSGRG00000023498) kiss2 (ENSSGRG00000023489) gys2 (ENSSGRG00000023243) spx (ENSSGRG00000023236) Common carp reference MODERN SPECIES 36 avpr2l (ENSCCRG00000031437) dnajb9b (ENSCCRG00000075532) GNPTAB (ENSCCRG00000038935) spic (ENSCCRG00000042424) ENSCCRG00000042420 mybpc1 (ENSCCRG00000040183) chpt1 (ENSCCRG00000039523) dram1 (ENSCCRG00000038915) washc3 (ENSCCRG00000038910) cwf19l1 (ENSCCRG00000059030) nrip2 (ENSCCRG00000069607) #18 ENSCCRG00000000988 recql (ENSCCRG00000066796) ascl1a (ENSCCRG00000080722) #20 pah (ENSCCRG00000054856) #21 th2 (ENSCCRG00000000913) #22 nup37 (ENSCCRG00000000895) #23 parpbp (ENSCCRG00000000885) #24 ENSCCRG00000000884 igf1 (ENSCCRG00000073680) #26 bcat1 (ENSCCRG00000074959) lrmp (ENSCCRG00000000514) dnai7 (ENSCCRG00000000491) sox5 (ENSCCRG00000082080) ENSCCRG00000000459 strap (ENSCCRG00000024611) tmpoa (ENSCCRG00000000492) slc25a3a (ENSCCRG00000062366) ldhba (ENSCCRG00000077140) GYS2 (ENSCCRG00000000631) kiss2 (ENSCCRG00000081830) Zebrafish MODERN SPECIES 19 spic (ENSDARG00000012435) ENSDARG00000087438 mybpc1 (ENSDARG00000045560) chpt1 (ENSDARG00000014572) gnptab (ENSDARG00000030153) dram1 (ENSDARG00000045561) washc3 (ENSDARG00000045563) ENSDARG00000115392 cwf19l1 (ENSDARG00000002128) klhl42 (ENSDARG00000006011) #17 nrip2 (ENSDARG00000079985) #18 itfg2 (ENSDARG00000002174) #19 recql (ENSDARG00000007175) ascl1a (ENSDARG00000038386) #20 pah (ENSDARG00000020143) #21 th2 (ENSDARG00000038384) #22 parpbp (ENSDARG00000029944) #24 pmch (ENSDARG00000073959) nup37 (ENSDARG00000094191) #23 igf1 (ENSDARG00000094132) #26 bcat1 (ENSDARG00000045568) lrmp (ENSDARG00000045574) dnai7 (ENSDARG00000016815) ENSDARG00000091957 sox5 (ENSDARG00000011582) ETNK1 (ENSDARG00000019420) strap (ENSDARG00000007405) tmpoa (ENSDARG00000007315) slc25a3a (ENSDARG00000027424) ldhba (ENSDARG00000019644) kiss2 (ENSDARG00000077985) Osteoglossiformes ANCESTRAL SPECIES 224 ENSGT00390000013715 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 ENSGT00600000084428.b ENSGT00940000154572.c ENSGT00940000157710 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 ENSGT00950000182976.a.a ENSGT00880000138031 ENSGT00940000164581.A.a.a ENSGT00940000166611 #20 ENSGT00950000182885.B #21 ENSGT00950000182885.C.b #22 ENSGT00390000010777 #23 ENSGT00390000006088 #24 ENSGT00940000159081 #26 ENSGT00530000064100 ENSGT00390000006349 ENSGT00950000183062.a.b.a.b ENSGT00950000182952.B.f ENSGT00940000163908 ENSGT00940000159117 ENSGT00940000156872.c ENSGT00390000005294 P. kingsleyae MODERN SPECIES 158 uhrf1bp1l (ENSPKIG00000005505) anks1b (ENSPKIG00000005619) ENSPKIG00000005743 apaf1 (ENSPKIG00000005791) ENSPKIG00000005922 tcp11l2 (ENSPKIG00000005943) actr6 (ENSPKIG00000005971) ENSPKIG00000005995 scyl2 (ENSPKIG00000006047) ascl1a (ENSPKIG00000006153) #20 pah (ENSPKIG00000006179) #21 th2 (ENSPKIG00000006229) #22 nup37 (ENSPKIG00000006278) #23 parpbp (ENSPKIG00000006315) #24 igf1 (ENSPKIG00000006362) #26 washc3 (ENSPKIG00000006403) dram1 (ENSPKIG00000006429) gnptab (ENSPKIG00000006461) chpt1 (ENSPKIG00000006521) mybpc1 (ENSPKIG00000006680) spic (ENSPKIG00000007092) arl1 (ENSPKIG00000007118) UTP20 (ENSPKIG00000007196) SLC5A8 (ENSPKIG00000007438) ENSPKIG00000007476 lyrm5a (ENSPKIG00000007509) dnai7 (ENSPKIG00000007520) Asian bonytongue MODERN SPECIES 11 mcat (ENSSFOG00015000457) pacsin2 (ENSSFOG00015000469) arfgap3 (ENSSFOG00015000529) IKBIP (ENSSFOG00015000593) uhrf1bp1l (ENSSFOG00015000671) anks1b (ENSSFOG00015000686) apaf1 (ENSSFOG00015000841) ENSSFOG00015000863 tcp11l2 (ENSSFOG00015000867) actr6 (ENSSFOG00015000878) ENSSFOG00015000921 scyl2 (ENSSFOG00015000976) si:ch211-244b2.4 (ENSSFOG00015001068) ascl1a (ENSSFOG00015027323) #20 pah (ENSSFOG00015001109) #21 th2 (ENSSFOG00015001175) #22 nup37 (ENSSFOG00015001235) #23 parpbp (ENSSFOG00015001286) #24 ENSSFOG00015001300 igf1 (ENSSFOG00015001317) #26 washc3 (ENSSFOG00015025745) dram1 (ENSSFOG00015033198) gnptab (ENSSFOG00015001407) sycp3 (ENSSFOG00015001502) chpt1 (ENSSFOG00015001512) mybpc1 (ENSSFOG00015001575) spic (ENSSFOG00015001658) arl1 (ENSSFOG00015001665) UTP20 (ENSSFOG00015001674) SLC5A8 (ENSSFOG00015001911) ENSSFOG00015001915