Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Felidae	ANCESTRAL SPECIES	2	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887	ENSGT00390000013127.a #35
Panthera	ANCESTRAL SPECIES		ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
lion	MODERN SPECIES	7	ENSPLOG00000004082 #7	SOX10 (ENSPLOG00000004089) #8	PICK1 (ENSPLOG00000004095) #9	SLC16A8 (ENSPLOG00000004105) #10	BAIAP2L2 (ENSPLOG00000004122) #11	PLA2G6 (ENSPLOG00000004160) #12	MAFF (ENSPLOG00000004192) #13	TMEM184B (ENSPLOG00000004201) #14	CSNK1E (ENSPLOG00000004227) #15	ENSPLOG00000004249 #16	KDELR3 (ENSPLOG00000004261) #17	DDX17 (ENSPLOG00000004283) #18	DMC1 (ENSPLOG00000004321) #19	FAM227A (ENSPLOG00000004377) #20	CBY1 (ENSPLOG00000004398) #21	TOMM22 (ENSPLOG00000004408) #22	JOSD1 (ENSPLOG00000004415) #23	GTPBP1 (ENSPLOG00000004432) #24	SUN2 (ENSPLOG00000004486) #25	DNAL4 (ENSPLOG00000004503) #26	NPTXR (ENSPLOG00000004511) #27	CBX6 (ENSPLOG00000004523) #28	CBX7 (ENSPLOG00000004540) #29	PDGFB (ENSPLOG00000004554) #30	RPL3 (ENSPLOG00000004565) #31	SYNGR1 (ENSPLOG00000004593) #32	TAB1 (ENSPLOG00000004618) #33	MGAT3 (ENSPLOG00000004630) #34	MIEF1 (ENSPLOG00000004635) #35	ATF4 (ENSPLOG00000004642) #36	RPS19BP1 (ENSPLOG00000004644) #37
leopard	DUPLICATION
leopard	MODERN SPECIES	13	POLR2F (ENSPPRG00000013030) #7	SOX10 (ENSPPRG00000012793) #8	PICK1 (ENSPPRG00000012610) #9	SLC16A8 (ENSPPRG00000012220) #10	BAIAP2L2 (ENSPPRG00000011792) #11	PLA2G6 (ENSPPRG00000010195) #12	MAFF (ENSPPRG00000009597) #13	TMEM184B (ENSPPRG00000009569) #14	CSNK1E (ENSPPRG00000009011) #15	KCNJ4 (ENSPPRG00000008729) #16	KDELR3 (ENSPPRG00000008609) #17	DDX17 (ENSPPRG00000008444) #18	DMC1 (ENSPPRG00000007856) #19	FAM227A (ENSPPRG00000007472) #20	CBY1 (ENSPPRG00000006584) #21	ENSPPRG00000006448 #22	JOSD1 (ENSPPRG00000006382) #23	GTPBP1 (ENSPPRG00000006069) #24	SUN2 (ENSPPRG00000005965) #25	DNAL4 (ENSPPRG00000005125) #26	NPTXR (ENSPPRG00000004972) #27	CBX6 (ENSPPRG00000004173) #28	APOBEC3Z3 (ENSPPRG00000003941)	ENSPPRG00000003726	ENSPPRG00000003675	CBX7 (ENSPPRG00000003648) #29	PDGFB (ENSPPRG00000003082) #30	RPL3 (ENSPPRG00000002759) #31	SYNGR1 (ENSPPRG00000002501) #32	TAB1 (ENSPPRG00000002241) #33	MGAT3 (ENSPPRG00000021876) #34
leopard	MODERN SPECIES	15	HES1 (ENSPPRG00000005951)	CPN2 (ENSPPRG00000015221)	LRRC15 (ENSPPRG00000006593)	GP5 (ENSPPRG00000015232)	ATP13A3 (ENSPPRG00000007749)	TMEM44 (ENSPPRG00000008957)	LSG1 (ENSPPRG00000010281)	XXYLT1 (ENSPPRG00000011382)	ACAP2 (ENSPPRG00000012986)	ENSPPRG00000015294	APOD (ENSPPRG00000015791)	BDH1 (ENSPPRG00000016845)	ENSPPRG00000019290	DLG1 (ENSPPRG00000002107)	MELTF (ENSPPRG00000003945)	ENSPPRG00000004399 #22	ENSPPRG00000004923	NCBP2AS2 (ENSPPRG00000015777)	NCBP2 (ENSPPRG00000005533)	SENP5 (ENSPPRG00000005966)	ENSPPRG00000006716	ENSPPRG00000006972	PAK2 (ENSPPRG00000007927)	ENSPPRG00000009377	ENSPPRG00000010478	CEP19 (ENSPPRG00000010673)	NRROS (ENSPPRG00000010920)	ENSPPRG00000011747	FBXO45 (ENSPPRG00000012529)	WDR53 (ENSPPRG00000013406)	SMCO1 (ENSPPRG00000013648)
Tiger	MODERN SPECIES	130	EIF3L (ENSPTIG00000013809)	MICALL1 (ENSPTIG00000017255)	C22orf23 (ENSPTIG00000019073)	POLR2F (ENSPTIG00000000632) #7	SOX10 (ENSPTIG00000004936) #8	PICK1 (ENSPTIG00000006829) #9	BAIAP2L2 (ENSPTIG00000012149) #11	PLA2G6 (ENSPTIG00000016175) #12	TMEM184B (ENSPTIG00000020913) #14	CSNK1E (ENSPTIG00000021791) #15	KDELR3 (ENSPTIG00000006911) #17	DDX17 (ENSPTIG00000008733) #18	DMC1 (ENSPTIG00000013693) #19	FAM227A (ENSPTIG00000016564) #20	CBY1 (ENSPTIG00000020240) #21	TOMM22 (ENSPTIG00000021350) #22	JOSD1 (ENSPTIG00000021549) #23	GTPBP1 (ENSPTIG00000021742) #24	SUN2 (ENSPTIG00000004612) #25	DNAL4 (ENSPTIG00000009420) #26	NPTXR (ENSPTIG00000009799) #27	ENSPTIG00000010283	CBX7 (ENSPTIG00000013014) #29	PDGFB (ENSPTIG00000013725) #30	RPL3 (ENSPTIG00000014930) #31	SYNGR1 (ENSPTIG00000015249) #32	TAB1 (ENSPTIG00000016309) #33	MGAT3 (ENSPTIG00000017328) #34	MIEF1 (ENSPTIG00000017698) #35	ATF4 (ENSPTIG00000018524) #36	RPS19BP1 (ENSPTIG00000019498) #37
Cat	MODERN SPECIES	238	CB4H22orf23 (ENSFCAG00000034998)	POLR2F (ENSFCAG00000002806) #7	PICK1 (ENSFCAG00000002809) #9	SLC16A8 (ENSFCAG00000027746) #10	BAIAP2L2 (ENSFCAG00000002811) #11	PLA2G6 (ENSFCAG00000002812) #12	MAFF (ENSFCAG00000044751) #13	TMEM184B (ENSFCAG00000023856) #14	CSNK1E (ENSFCAG00000002814) #15	KCNJ4 (ENSFCAG00000030020) #16	KDELR3 (ENSFCAG00000002816) #17	DDX17 (ENSFCAG00000031570) #18	DMC1 (ENSFCAG00000037004) #19	FAM227A (ENSFCAG00000002819) #20	CBY1 (ENSFCAG00000031443) #21	TOMM22 (ENSFCAG00000002820) #22	JOSD1 (ENSFCAG00000033794) #23	GTPBP1 (ENSFCAG00000010897) #24	SUN2 (ENSFCAG00000030252) #25	DNAL4 (ENSFCAG00000026836) #26	NPTXR (ENSFCAG00000040183) #27	CBX6 (ENSFCAG00000045219) #28	APOBEC3Z3 (ENSFCAG00000005251)	CBX7 (ENSFCAG00000026160) #29	PDGFB (ENSFCAG00000015580) #30	RPL3 (ENSFCAG00000005820) #31	SYNGR1 (ENSFCAG00000038118) #32	TAB1 (ENSFCAG00000011951) #33	MGAT3 (ENSFCAG00000015578) #34	ENSFCAG00000049023	MIEF1 (ENSFCAG00000022297) #35
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES																	ENSGT00390000016475.o #22
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00530000063702.b	ENSGT00940000159920	ENSGT00940000160265	ENSGT00950000182894.B	ENSGT00550000076453	ENSGT00960000187025	ENSGT00940000156666	ENSGT00940000162207	ENSGT00940000158868.h	ENSGT00390000016475.o #22	ENSGT00550000075088.a.a.db.a	ENSGT00730000110939.a	ENSGT00390000014665	ENSGT00510000048359	ENSGT00940000158822	ENSGT00510000049652	ENSGT00390000002827	ENSGT00390000002278	ENSGT00940000158458	ENSGT01100000263515.a.a	ENSGT00390000006698	ENSGT00390000015528	ENSGT00940000153417.A	ENSGT00390000003337	ENSGT00390000007652
Dingo	MODERN SPECIES	172	HAGHL (ENSCAFG00020008946)	CIAO3 (ENSCAFG00020008936)	ENSCAFG00020008907	MSLNL (ENSCAFG00020008896)	RPUSD1 (ENSCAFG00020008891)	CHTF18 (ENSCAFG00020008707)	GNG13 (ENSCAFG00020008692)	LMF1 (ENSCAFG00020008632)	SOX8 (ENSCAFG00020008591)	SSTR5 (ENSCAFG00020008586)	TEKT4 (ENSCAFG00020008580)	ENSCAFG00020008579	CACNA1H (ENSCAFG00020002134)	ENSCAFG00020001442	ENSCAFG00020001432	ENSCAFG00020001407 #22	ENSCAFG00020001370	BAIAP3 (ENSCAFG00020001352)	TSR3 (ENSCAFG00020001344)	GNPTG (ENSCAFG00020001337)	UNKL (ENSCAFG00020001284)	UQCC4 (ENSCAFG00020001278)	CCDC154 (ENSCAFG00020001227)	CLCN7 (ENSCAFG00020001216)	PTX4 (ENSCAFG00020001191)	TELO2 (ENSCAFG00020001179)	TMEM204 (ENSCAFG00020001166)	IFT140 (ENSCAFG00020001129)	CRAMP1 (ENSCAFG00020000788)	JPT2 (ENSCAFG00020000738)	MAPK8IP3 (ENSCAFG00020000709)
Dog	MODERN SPECIES	34	ENSCAFG00845025947	MSLNL (ENSCAFG00845025803)	RPUSD1 (ENSCAFG00845025711)	CHTF18 (ENSCAFG00845025078)	GNG13 (ENSCAFG00845025007)	ENSCAFG00845024875	ENSCAFG00845024837	SOX8 (ENSCAFG00845024796)	SSTR5 (ENSCAFG00845024735)	ENSCAFG00845024643	ENSCAFG00845024614	ENSCAFG00845024542	CACNA1H (ENSCAFG00845023354)	ENSCAFG00845022862	ENSCAFG00845022755	ENSCAFG00845022697 #22	UNKL (ENSCAFG00845022286)	C6H16orf91 (ENSCAFG00845022262)	ENSCAFG00845022174	PERCC1 (ENSCAFG00845022143)	CCDC154 (ENSCAFG00845022050)	CLCN7 (ENSCAFG00845021512)	PTX4 (ENSCAFG00845021394)	TELO2 (ENSCAFG00845021282)	ENSCAFG00845021199	IFT140 (ENSCAFG00845021074)	CRAMP1 (ENSCAFG00845020921)	JPT2 (ENSCAFG00845020882)	MAPK8IP3 (ENSCAFG00845019811)	MRPS34 (ENSCAFG00845019497)	ENSCAFG00845019435
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES	10	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.p.a #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l.p #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00390000015060.e.a.a	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.e #21	ENSGT00390000016475.p.a #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l.p #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Dingo	MODERN SPECIES	307	SOX10 (ENSCAFG00020003681) #8	PICK1 (ENSCAFG00020003561) #9	SLC16A8 (ENSCAFG00020003537) #10	BAIAP2L2 (ENSCAFG00020003513) #11	PLA2G6 (ENSCAFG00020003501) #12	MAFF (ENSCAFG00020003500) #13	TMEM184B (ENSCAFG00020003497) #14	CSNK1E (ENSCAFG00020003490) #15	KCNJ4 (ENSCAFG00020003485) #16	KDELR3 (ENSCAFG00020003482) #17	DDX17 (ENSCAFG00020002867) #18	DMC1 (ENSCAFG00020002798) #19	ENSCAFG00020002794	ENSCAFG00020002773 #20	ENSCAFG00020002764 #21	ENSCAFG00020002761 #22	JOSD1 (ENSCAFG00020002756) #23	GTPBP1 (ENSCAFG00020002751) #24	SUN2 (ENSCAFG00020002742) #25	DNAL4 (ENSCAFG00020002729) #26	NPTXR (ENSCAFG00020002700) #27	CBX6 (ENSCAFG00020002691) #28	ENSCAFG00020002661	ENSCAFG00020002641	ENSCAFG00020002615	ENSCAFG00020002584	CBX7 (ENSCAFG00020002567) #29	PDGFB (ENSCAFG00020002561) #30	ENSCAFG00020002524 #31	SYNGR1 (ENSCAFG00020002516) #32	TAB1 (ENSCAFG00020002497) #33
Dog	MODERN SPECIES	1	C22orf23 (ENSCAFG00845005422)	POLR2F (ENSCAFG00845005328)	SOX10 (ENSCAFG00845005267) #8	PICK1 (ENSCAFG00845025295) #9	SLC16A8 (ENSCAFG00845025225) #10	BAIAP2L2 (ENSCAFG00845025037) #11	PLA2G6 (ENSCAFG00845024672) #12	MAFF (ENSCAFG00845024590) #13	CSNK1E (ENSCAFG00845024113) #14	KDELR3 (ENSCAFG00845023852) #17	DDX17 (ENSCAFG00845023692) #18	DMC1 (ENSCAFG00845023556) #19	ENSCAFG00845023480	FAM227A (ENSCAFG00845023331) #20	CBY1 (ENSCAFG00845023252) #21	TOMM22 (ENSCAFG00845023216) #22	JOSD1 (ENSCAFG00845023184) #23	GTPBP1 (ENSCAFG00845023003) #24	SUN2 (ENSCAFG00845022745) #25	DNAL4 (ENSCAFG00845022699) #26	ENSCAFG00845022648	NPTXR (ENSCAFG00845022551) #27	CBX6 (ENSCAFG00845022457) #28	APOBEC3Z1 (ENSCAFG00845022387)	APOBEC3Z1 (ENSCAFG00845022347)	APOBEC3Z3 (ENSCAFG00845022251)	CBX7 (ENSCAFG00845022140) #29	PDGFB (ENSCAFG00845022039) #30	RPL3 (ENSCAFG00845021864) #31	SYNGR1 (ENSCAFG00845021779) #32	ENSCAFG00845021674
Red fox	MODERN SPECIES	194	FBP1 (ENSVVUG00000022822)	FBP2 (ENSVVUG00000022821)	ENSVVUG00000022801	PLA2G6 (ENSVVUG00000022796) #12	MAFF (ENSVVUG00000022794) #13	TMEM184B (ENSVVUG00000022788) #14	CSNK1E (ENSVVUG00000022775) #15	KCNJ4 (ENSVVUG00000022771) #16	KDELR3 (ENSVVUG00000022770) #17	ENSVVUG00000022766	DDX17 (ENSVVUG00000022762) #18	DMC1 (ENSVVUG00000022631) #19	ENSVVUG00000022626	ENSVVUG00000022620 #20	CBY1 (ENSVVUG00000022619) #21	ENSVVUG00000022618 #22	JOSD1 (ENSVVUG00000022615) #23	GTPBP1 (ENSVVUG00000022607) #24	SUN2 (ENSVVUG00000022601) #25	ENSVVUG00000022598	NPTXR (ENSVVUG00000022595) #27	CBX6 (ENSVVUG00000022589) #28	ENSVVUG00000022583
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000160834	ENSGT00390000018761	ENSGT00840000129887	ENSGT00390000009552	ENSGT00390000013520	ENSGT00940000157382	ENSGT00390000010822	ENSGT00940000155690	ENSGT00940000155797	ENSGT00390000003769	ENSGT00390000010722	ENSGT00940000155672	ENSGT00390000006454	ENSGT00940000158439	ENSGT00940000158882	ENSGT00390000016475.p.b #22	ENSGT00950000185321	ENSGT00950000182970.A.a	ENSGT00390000011888	ENSGT00390000013680.b	ENSGT00940000156740	ENSGT00940000154203	ENSGT00940000157069	ENSGT00390000007230	ENSGT00390000015991	ENSGT00950000183166.a.a.a.a	ENSGT00940000158902	ENSGT00940000159010	ENSGT00940000156673	ENSGT00390000018533	ENSGT00510000046704.a
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00390000018761	ENSGT00840000129887	ENSGT00390000009552	ENSGT00390000013520	ENSGT00940000157382	ENSGT00390000010822	ENSGT00940000155690	ENSGT00940000155797	ENSGT00390000003769	ENSGT00390000010722	ENSGT00940000155672	ENSGT00390000006454	ENSGT00940000158439	ENSGT00390000010512.e.a	ENSGT00940000158882	ENSGT00390000016475.p.b #22	ENSGT00950000185321	ENSGT00950000182970.A.a	ENSGT00390000011888	ENSGT00390000013680.b	ENSGT00940000156740	ENSGT00940000154203	ENSGT00940000157069	ENSGT00390000007230	ENSGT00390000015991	ENSGT00950000183166.a.a.a.a	ENSGT00940000158902	ENSGT00940000159010	ENSGT00940000156673	ENSGT00390000018533	ENSGT00510000046704.a
Dingo	MODERN SPECIES	150	ENSCAFG00020002343	ENSCAFG00020002337	ENSCAFG00020002335	CA4 (ENSCAFG00020002325)	ENSCAFG00020002319	ENSCAFG00020002257	ENSCAFG00020002236	ENSCAFG00020002234	APPBP2 (ENSCAFG00020001929)	PPM1D (ENSCAFG00020001906)	ENSCAFG00020001897	BCAS3 (ENSCAFG00020001889)	TBX2 (ENSCAFG00020001839)	ENSCAFG00020001835	TBX4 (ENSCAFG00020001821)	ENSCAFG00020001814 #22	ENSCAFG00020001810	BRIP1 (ENSCAFG00020001774)	INTS2 (ENSCAFG00020001542)	MED13 (ENSCAFG00020001413)	ENSCAFG00020001404	RNFT1 (ENSCAFG00020001391)	RPS6KB1 (ENSCAFG00020000279)	TUBD1 (ENSCAFG00020026511)	VMP1 (ENSCAFG00020026504)	PTRH2 (ENSCAFG00020026497)	CLTC (ENSCAFG00020026080)	DHX40 (ENSCAFG00020026016)	YPEL2 (ENSCAFG00020026010)	GDPD1 (ENSCAFG00020026008)	SMG8 (ENSCAFG00020026006)
Dog	MODERN SPECIES	37	DHRS11 (ENSCAFG00845028995)	GGNBP2 (ENSCAFG00845028948)	PIGW (ENSCAFG00845028850)	ZNHIT3 (ENSCAFG00845028804)	MYO19 (ENSCAFG00845028534)	CA4 (ENSCAFG00845028365)	ENSCAFG00845028323	ENSCAFG00845028214	CHCT1 (ENSCAFG00845028175)	APPBP2 (ENSCAFG00845028094)	PPM1D (ENSCAFG00845028053)	BCAS3 (ENSCAFG00845027514)	TBX2 (ENSCAFG00845027360)	ENSCAFG00845027312	TBX4 (ENSCAFG00845027223)	ENSCAFG00845027180 #22	BRIP1 (ENSCAFG00845027066)	ENSCAFG00845026829	ENSCAFG00845026602	RNFT1 (ENSCAFG00845026431)	RPS6KB1 (ENSCAFG00845026236)	TUBD1 (ENSCAFG00845025976)	VMP1 (ENSCAFG00845025852)	PTRH2 (ENSCAFG00845025810)	CLTC (ENSCAFG00845025273)	DHX40 (ENSCAFG00845024973)	YPEL2 (ENSCAFG00845024894)	GDPD1 (ENSCAFG00845024811)	SMG8 (ENSCAFG00845024758)	PRR11 (ENSCAFG00845024677)	SKA2 (ENSCAFG00845024401)
Red fox	MODERN SPECIES	20	MRM1 (ENSVVUG00000018420)	DHRS11 (ENSVVUG00000018406)	GGNBP2 (ENSVVUG00000018391)	PIGW (ENSVVUG00000018383)	MYO19 (ENSVVUG00000018371)	ZNHIT3 (ENSVVUG00000018353)	CA4 (ENSVVUG00000018348)	USP32 (ENSVVUG00000018316)	CUNH17orf64 (ENSVVUG00000018306)	ENSVVUG00000018292	APPBP2 (ENSVVUG00000018282)	PPM1D (ENSVVUG00000018272)	BCAS3 (ENSVVUG00000018211)	TBX2 (ENSVVUG00000018199)	TBX4 (ENSVVUG00000018197)	ENSVVUG00000018193 #22	BRIP1 (ENSVVUG00000018186)	INTS2 (ENSVVUG00000018181)	MED13 (ENSVVUG00000018156)	RNFT1 (ENSVVUG00000018147)	RPS6KB1 (ENSVVUG00000018140)	TUBD1 (ENSVVUG00000018135)	ENSVVUG00000018127	VMP1 (ENSVVUG00000018124)	PTRH2 (ENSVVUG00000018120)	CLTC (ENSVVUG00000013604)	DHX40 (ENSVVUG00000013502)	YPEL2 (ENSVVUG00000013496)	GDPD1 (ENSVVUG00000013493)	SMG8 (ENSVVUG00000013487)	PRR11 (ENSVVUG00000013471)
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049.v #18	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049.v #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Ferret	MODERN SPECIES	171	POLR2F (ENSMPUG00000012997) #7	SOX10 (ENSMPUG00000013028) #8	PICK1 (ENSMPUG00000013036) #9	SLC16A8 (ENSMPUG00000013044) #10	BAIAP2L2 (ENSMPUG00000013062) #11	PLA2G6 (ENSMPUG00000013075) #12	MAFF (ENSMPUG00000013085) #13	TMEM184B (ENSMPUG00000013087) #14	CSNK1E (ENSMPUG00000013092) #15	KCNJ4 (ENSMPUG00000013098) #16	KDELR3 (ENSMPUG00000013101) #17	DDX17 (ENSMPUG00000013125) #18	DMC1 (ENSMPUG00000013137) #19	FAM227A (ENSMPUG00000013142) #20	CBY1 (ENSMPUG00000013150) #21	TOMM22 (ENSMPUG00000013156) #22	ENSMPUG00000013171 #23	GTPBP1 (ENSMPUG00000013174) #24	SUN2 (ENSMPUG00000013182) #25	DNAL4 (ENSMPUG00000013186) #26	CBX6 (ENSMPUG00000013198) #28	ENSMPUG00000013233	ENSMPUG00000013235	ENSMPUG00000013239	ENSMPUG00000013243	CBX7 (ENSMPUG00000013246) #29	PDGFB (ENSMPUG00000013265) #30	RPL3 (ENSMPUG00000013271) #31	SYNGR1 (ENSMPUG00000013354) #32	TAB1 (ENSMPUG00000013374) #33	MGAT3 (ENSMPUG00000013377) #34
American mink	MODERN SPECIES	105	C22orf23 (ENSNVIG00000002203)	SOX10 (ENSNVIG00000002186) #8	POLR2F (ENSNVIG00000002120) #7	PICK1 (ENSNVIG00000002099) #9	SLC16A8 (ENSNVIG00000002093) #10	BAIAP2L2 (ENSNVIG00000002027) #11	PLA2G6 (ENSNVIG00000001952) #12	TMEM184B (ENSNVIG00000001929) #14	CSNK1E (ENSNVIG00000001882) #15	KCNJ4 (ENSNVIG00000001876) #16	KDELR3 (ENSNVIG00000001872) #17	DDX17 (ENSNVIG00000001807) #18	ENSNVIG00000001787 #19	FAM227A (ENSNVIG00000001762) #20	CBY1 (ENSNVIG00000001755) #21	TOMM22 (ENSNVIG00000001744) #22	JOS1 (ENSNVIG00000001730) #23	GTPBP1 (ENSNVIG00000001692) #24	SUN2 (ENSNVIG00000001578) #25	DNAL4 (ENSNVIG00000001562) #26	NPTXR (ENSNVIG00000001538) #27	CBX6 (ENSNVIG00000001513) #28	ENSNVIG00000001497	ENSNVIG00000001494	ENSNVIG00000001462	CBX7 (ENSNVIG00000001424) #29	PDGFB (ENSNVIG00000001399) #30	RPL3 (ENSNVIG00000001342) #31	SYNGR1 (ENSNVIG00000001331) #32	TAB1 (ENSNVIG00000001267) #33	MGAT3 (ENSNVIG00000001259) #34
Ursidae	ANCESTRAL SPECIES	13	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049.v #18	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Ursus	ANCESTRAL SPECIES	29	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049.v #18	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00760000119398 #19	ENSGT00950000185175	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Polar bear	MODERN SPECIES	280	POLR2F (ENSUMAG00000015052) #7	SOX10 (ENSUMAG00000015049) #8	PICK1 (ENSUMAG00000015031) #9	SLC16A8 (ENSUMAG00000015023) #10	BAIAP2L2 (ENSUMAG00000015001) #11	PLA2G6 (ENSUMAG00000014747) #12	TMEM184B (ENSUMAG00000014708) #14	CSNK1E (ENSUMAG00000014696) #15	ENSUMAG00000014692 #16	KDELR3 (ENSUMAG00000014666) #17	ENSUMAG00000014659	ENSUMAG00000014651	DMC1 (ENSUMAG00000014632) #19	ENSUMAG00000014621	CBY1 (ENSUMAG00000014608) #21	TOMM22 (ENSUMAG00000014607) #22	JOSD1 (ENSUMAG00000014603) #23	GTPBP1 (ENSUMAG00000014480) #24	SUN2 (ENSUMAG00000014464) #25	ENSUMAG00000014462	NPTXR (ENSUMAG00000014457) #27	ENSUMAG00000014447	ENSUMAG00000014441	ENSUMAG00000014435	CBX7 (ENSUMAG00000014429) #29	PDGFB (ENSUMAG00000014423) #30	RPL3 (ENSUMAG00000014413) ##31	SYNGR1 (ENSUMAG00000014410) #32	TAB1 (ENSUMAG00000014398) #33	ENSUMAG00000014395	MIEF1 (ENSUMAG00000014388) #35
American black bear	MODERN SPECIES	5107															CBY1 (ENSUAMG00000011622) #21	TOMM22 (ENSUAMG00000011624) #22	JOSD1 (ENSUAMG00000011627) #23	ENSUAMG00000011632	ENSUAMG00000011635 #24
Giant Panda	MODERN SPECIES	2	RBM47 (ENSAMEG00000009672)	CHRNA9 (ENSAMEG00000009679)	RHOH (ENSAMEG00000018478)	N4BP2 (ENSAMEG00000009686)	PDS5A (ENSAMEG00000002989)	UBE2K (ENSAMEG00000003103)	SMIM14 (ENSAMEG00000003122)	UGDH (ENSAMEG00000003124)	LIAS (ENSAMEG00000003154)	RPL9 (ENSAMEG00000003187)	KLB (ENSAMEG00000003214)	RFC1 (ENSAMEG00000003216)	WDR19 (ENSAMEG00000003268)	KLHL5 (ENSAMEG00000003311)	TMEM156 (ENSAMEG00000010032)	ENSAMEG00000019419 #22	FAM114A1 (ENSAMEG00000010034)	TLR6 (ENSAMEG00000018483)	TLR1 (ENSAMEG00000018486)	TLR10 (ENSAMEG00000018488)	KLF3 (ENSAMEG00000010056)	TBC1D1 (ENSAMEG00000011195)	PGM2 (ENSAMEG00000011214)	RELL1 (ENSAMEG00000011264)	C4orf19 (ENSAMEG00000011277)	NWD2 (ENSAMEG00000024908)	DTHD1 (ENSAMEG00000005528)	ARAP2 (ENSAMEG00000005492)	ENSAMEG00000029477	PCDH7 (ENSAMEG00000026428)	STIM2 (ENSAMEG00000014649)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Equus	ANCESTRAL SPECIES	21	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.n.a	ENSGT00940000162695.j	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Donkey	MODERN SPECIES	11	POLR2F (ENSEASG00005030218) #7	SOX10 (ENSEASG00005018801) #8	PICK1 (ENSEASG00005018797) #9	SLC16A8 (ENSEASG00005018794) #10	BAIAP2L2 (ENSEASG00005018784) #11	PLA2G6 (ENSEASG00005018779) #12	MAFF (ENSEASG00005024668) #13	TMEM184B (ENSEASG00005018773) #14	CSNK1E (ENSEASG00005018771) #15	KCNJ4 (ENSEASG00005018770) #16	KDELR3 (ENSEASG00005029743) #17	DDX17 (ENSEASG00005018767) #18	DMC1 (ENSEASG00005018765) #19	FAM227A (ENSEASG00005032439) #20	CBY1 (ENSEASG00005032191) #21	TOMM22 (ENSEASG00005018756) #22	ENSEASG00005031587 #23	GTPBP1 (ENSEASG00005018753) #24	SUN2 (ENSEASG00005018658) #25	ENSEASG00005032184	NPTXR (ENSEASG00005018647) #27	CBX6 (ENSEASG00005018645) #28	ENSEASG00005028788	ENSEASG00005032011	ENSEASG00005024838	ENSEASG00005037287	ENSEASG00005030746	ENSEASG00005018641	ENSEASG00005025243	ENSEASG00005034068	ENSEASG00005037890
Horse	MODERN SPECIES	20	SOX10 (ENSECAG00000024147) #8	PICK1 (ENSECAG00000003570) #9	ENSECAG00000057704	SLC16A8 (ENSECAG00000018691) #10	BAIAP2L2 (ENSECAG00000018782) #11	PLA2G6 (ENSECAG00000020924) #12	MAFF (ENSECAG00000034857) #13	TMEM184B (ENSECAG00000020179) #14	CSNK1E (ENSECAG00000021631) #15	KCNJ4 (ENSECAG00000023396) #16	KDELR3 (ENSECAG00000024520) #17	DDX17 (ENSECAG00000025110) #18	DMC1 (ENSECAG00000019634) #19	FAM227A (ENSECAG00000006137) #20	CBY1 (ENSECAG00000007977) #21	TOMM22 (ENSECAG00000040364) #22	JOSD1 (ENSECAG00000015546) #23	GTPBP1 (ENSECAG00000018027) #24	ENSECAG00000048549	SUN2 (ENSECAG00000000797) #25	ENSECAG00000027712	NPTXR (ENSECAG00000028067) #27	CBX6 (ENSECAG00000018311) #28	ENSECAG00000059535	ENSECAG00000006071	ENSECAG00000007726	CBX7 (ENSECAG00000012939) #29	PDGFB (ENSECAG00000018472) #30	RPL3 (ENSECAG00000020665) #31	SYNGR1 (ENSECAG00000051717) #32	TAB1 (ENSECAG00000017245) #33
Chiroptera	ANCESTRAL SPECIES	23	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00960000192491	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1917															CBY1 (ENSMLUG00000003757) #21	ENSMLUG00000003761 #22	JOSD1 (ENSMLUG00000003764) #23	GTPBP1 (ENSMLUG00000003767) #24	SUN2 (ENSMLUG00000003774) #25	ENSMLUG00000027641 #26
Microbat	MODERN SPECIES	941	ZNF711 (ENSMLUG00000009270)	APOOL (ENSMLUG00000011384)	ENSMLUG00000026037	ENSMLUG00000022222	ENSMLUG00000027285	ENSMLUG00000006649	ENSMLUG00000027800	RPS6KA6 (ENSMLUG00000015440)	ENSMLUG00000011590	POU3F4 (ENSMLUG00000004140)	ENSMLUG00000006065	ENSMLUG00000025070	SH3BGRL (ENSMLUG00000010051)	HMGN5 (ENSMLUG00000029467)	ENSMLUG00000024815	ENSMLUG00000013978 #22	BRWD3 (ENSMLUG00000005607)	TENT5D (ENSMLUG00000000409)	ENSMLUG00000024811	TBX22 (ENSMLUG00000016826)	ITM2A (ENSMLUG00000010431)	ENSMLUG00000025668	GPR174 (ENSMLUG00000005162)	ENSMLUG00000025815	P2RY10 (ENSMLUG00000010499)	LPAR4 (ENSMLUG00000006096)	RTL3 (ENSMLUG00000002371)	TAF9B (ENSMLUG00000014581)	PGK1 (ENSMLUG00000017791)	ENSMLUG00000026413	ATP7A (ENSMLUG00000025990)
Greater horseshoe bat	MODERN SPECIES	1	SOX10 (ENSRFEG00010002814) #8	PICK1 (ENSRFEG00010002797) #9	SLC16A8 (ENSRFEG00010002759) #10	BAIAP2L2 (ENSRFEG00010002645) #11	PLA2G6 (ENSRFEG00010002556) #12	MAFF (ENSRFEG00010002520) #13	TMEM184B (ENSRFEG00010002493) #14	CSNK1E (ENSRFEG00010002455) #15	KCNJ4 (ENSRFEG00010002433) #16	KDELR3 (ENSRFEG00010002412) #17	ENSRFEG00010002391	DDX17 (ENSRFEG00010002319) #18	DMC1 (ENSRFEG00010002248) #19	FAM227A (ENSRFEG00010002201) #20	CBY1 (ENSRFEG00010002158) #21	TOMM22 (ENSRFEG00010002135) #22	JOSD1 (ENSRFEG00010002118) #23	GTPBP1 (ENSRFEG00010002057) #24	SUN2 (ENSRFEG00010001994) #25	DNAL4 (ENSRFEG00010002031) #26	NPTXR (ENSRFEG00010001973) #27	CBX6 (ENSRFEG00010001951) #28	ENSRFEG00010001823	ENSRFEG00010001731	ENSRFEG00010001719	ENSRFEG00010001708	ENSRFEG00010001693	CBX7 (ENSRFEG00010001667) #29	PDGFB (ENSRFEG00010001632) #30	ENSRFEG00010001554 #31	SYNGR1 (ENSRFEG00010001514) #32
Megabat	MODERN SPECIES	425	MICALL1 (ENSPVAG00000010104)	C22orf23 (ENSPVAG00000010106)	POLR2F (ENSPVAG00000010107) #7	SOX10 (ENSPVAG00000010109) #8	PICK1 (ENSPVAG00000010113) #9	SLC16A8 (ENSPVAG00000010116) #10	BAIAP2L2 (ENSPVAG00000010118) #11	PLA2G6 (ENSPVAG00000010119) #12	TMEM184B (ENSPVAG00000010121) #14	CSNK1E (ENSPVAG00000010124) #15	KDELR3 (ENSPVAG00000010132) #17	DDX17 (ENSPVAG00000010133) #18	DMC1 (ENSPVAG00000010136) #19	ENSPVAG00000010139 #20	CBY1 (ENSPVAG00000010141) #21	TOMM22 (ENSPVAG00000010142) #22	JOSD1 (ENSPVAG00000010148) #23	GTPBP1 (ENSPVAG00000010149) #24	SUN2 (ENSPVAG00000010153) #25	ENSPVAG00000010156	NPTXR (ENSPVAG00000024110) #27	CBX6 (ENSPVAG00000010157) #28
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Suina	ANCESTRAL SPECIES	21	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35
Pig	MODERN SPECIES	13	POLR2F (ENSSSCG00000000116) #7	PICK1 (ENSSSCG00000000114) #9	SLC16A8 (ENSSSCG00000000113) #10	BAIAP2L2 (ENSSSCG00000000111) #11	PLA2G6 (ENSSSCG00000000110) #12	MAFF (ENSSSCG00000030165) #13	TMEM184B (ENSSSCG00000000108) #14	CSNK1E (ENSSSCG00000000107) #15	KCNJ4 (ENSSSCG00000000106) #16	KDELR3 (ENSSSCG00000000105) #17	ENSSSCG00000000104	DMC1 (ENSSSCG00000000103) #19	ENSSSCG00000055522	FAM227A (ENSSSCG00000035577) #20	ENSSSCG00000043051	TOMM22 (ENSSSCG00000000097) #22	JOSD1 (ENSSSCG00000039555) #23	SUN2 (ENSSSCG00000000094) #25	GTPBP1 (ENSSSCG00000000095) #24	DNAL4 (ENSSSCG00000000093) #26	NPTXR (ENSSSCG00000000092) #27	CBX6 (ENSSSCG00000040334) #28	ENSSSCG00000054928	ENSSSCG00000000091	CBX7 (ENSSSCG00000060236) #29	PDGFB (ENSSSCG00000033327) #30	RPL3 (ENSSSCG00000040494) #31	SYNGR1 (ENSSSCG00000020873) #32	TAB1 (ENSSSCG00000000087) #33	MGAT3 (ENSSSCG00000038126) #34	ENSSSCG00000039538 #35
Chacoan peccary	DUPLICATION
Chacoan peccary	MODERN SPECIES	871	SOX10 (ENSCWAG00000017165) #8	POLR2F (ENSCWAG00000017081) #7	PICK1 (ENSCWAG00000017044) #9	SLC16A8 (ENSCWAG00000017009) #10	BAIAP2L2 (ENSCWAG00000016975) #11	PLA2G6 (ENSCWAG00000016915) #12	MAFF (ENSCWAG00000016878) #13	TMEM184B (ENSCWAG00000016850) #14	CSNK1E (ENSCWAG00000016780) #15	KCNJ4 (ENSCWAG00000016756) #16	KDELR3 (ENSCWAG00000016733) #17	DDX17 (ENSCWAG00000016555) #18	DMC1 (ENSCWAG00000016302) #19	FAM227A (ENSCWAG00000015957) #20	CBY1 (ENSCWAG00000015914) #21	TOMM22 (ENSCWAG00000015897) #22	JOSD1 (ENSCWAG00000015877) #23	GTPBP1 (ENSCWAG00000015819) #24	SUN2 (ENSCWAG00000015783) #25	DNAL4 (ENSCWAG00000015733) #26	NPTXR (ENSCWAG00000015678) #27	CBX6 (ENSCWAG00000015646) #28	ENSCWAG00000015630	CBX7 (ENSCWAG00000015534) #29	PDGFB (ENSCWAG00000015445) #30	RPL3 (ENSCWAG00000015302) #31	SYNGR1 (ENSCWAG00000015255) #32	TAB1 (ENSCWAG00000015165) #33	MGAT3 (ENSCWAG00000015150) #34	MIEF1 (ENSCWAG00000015110) #35	ATF4 (ENSCWAG00000015080) #36
Chacoan peccary	MODERN SPECIES	812	ENSCWAG00000009895	ENSCWAG00000009876	ENSCWAG00000009820	ENSCWAG00000009507	GNAZ (ENSCWAG00000009455)	RSPH14 (ENSCWAG00000009401)	RAB36 (ENSCWAG00000009141)	BCR (ENSCWAG00000008687)	ENSCWAG00000008625	SPECC1L (ENSCWAG00000008449)	ADORA2A (ENSCWAG00000008398)	UPB1 (ENSCWAG00000008297)	GUCD1 (ENSCWAG00000008194)	ENSCWAG00000008147	ENSCWAG00000007885	ENSCWAG00000007842 #22	GGT5 (ENSCWAG00000007509)	SUSD2 (ENSCWAG00000007393)	CABIN1 (ENSCWAG00000007336)	ENSCWAG00000007308	ENSCWAG00000007275	ENSCWAG00000007256	GSTT4 (ENSCWAG00000007187)	ENSCWAG00000007023	MIF (ENSCWAG00000006988)	SLC2A11 (ENSCWAG00000006844)	DERL3 (ENSCWAG00000006793)	SMARCB1 (ENSCWAG00000006732)	MMP11 (ENSCWAG00000006658)	CHCHD10 (ENSCWAG00000006641)	C22orf15 (ENSCWAG00000006599)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Camelidae	ANCESTRAL SPECIES	28	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT00530000063801.a #36
Alpaca	MODERN SPECIES	3178											KDELR3 (ENSVPAG00000001474) #17	DDX17 (ENSVPAG00000001476) #18	DMC1 (ENSVPAG00000001479) #19	FAM227A (ENSVPAG00000001481) #20	CBY1 (ENSVPAG00000001484) #21	TOMM22 (ENSVPAG00000001485) #22	JOSD1 (ENSVPAG00000001486) #23	GTPBP1 (ENSVPAG00000001488) #24	ENSVPAG00000001489 #25
Arabian camel	DUPLICATION
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	3	POLR2F (ENSCDRG00005011153) #7	SOX10 (ENSCDRG00005011404) #8	PICK1 (ENSCDRG00005011457) #9	SLC16A8 (ENSCDRG00005011510) #10	BAIAP2L2 (ENSCDRG00005011560) #11	PLA2G6 (ENSCDRG00005011621) #12	MAFF (ENSCDRG00005011815) #13	TMEM184B (ENSCDRG00005011844) #14	CSNK1E (ENSCDRG00005011965) #15	KCNJ4 (ENSCDRG00005012060) #16	KDELR3 (ENSCDRG00005012072) #17	DDX17 (ENSCDRG00005012121) #18	DMC1 (ENSCDRG00005012248) #19	FAM227A (ENSCDRG00005012576) #20	CBY1 (ENSCDRG00005012693) #21	ENSCDRG00005012757 #22	JOSD1 (ENSCDRG00005012778) #23	GTPBP1 (ENSCDRG00005012834) #24	SUN2 (ENSCDRG00005012926) #25	DNAL4 (ENSCDRG00005013091) #26	NPTXR (ENSCDRG00005013164) #27	CBX6 (ENSCDRG00005013470) #28	ENSCDRG00005013524	ENSCDRG00005013590	PDGFB (ENSCDRG00005013910) #30	ENSCDRG00005013983 #31	SYNGR1 (ENSCDRG00005014126) #32	TAB1 (ENSCDRG00005014324) #33	MGAT3 (ENSCDRG00005014395) #34	MIEF1 (ENSCDRG00005014418) #35	ATF4 (ENSCDRG00005014461) #36
Arabian camel	MODERN SPECIES	13	CEP350 (ENSCDRG00005010547)	ENSCDRG00005011056	QSOX1 (ENSCDRG00005011092)	LHX4 (ENSCDRG00005011304)	ACBD6 (ENSCDRG00005011391)	XPR1 (ENSCDRG00005011458)	ENSCDRG00005011778	ENSCDRG00005011798	KIAA1614 (ENSCDRG00005011827)	STX6 (ENSCDRG00005011876)	MR1 (ENSCDRG00005011944)	ENSCDRG00005012144	ENSCDRG00005012178	ENSCDRG00005012195	ENSCDRG00005012222	ENSCDRG00005012269 #22	ENSCDRG00005012290	CACNA1E (ENSCDRG00005012390)	ENSCDRG00005013347	ENSCDRG00005013394	ZNF648 (ENSCDRG00005013424)	ENSCDRG00005013446	TEDDM1 (ENSCDRG00005013549)	ENSCDRG00005013578	RGSL1 (ENSCDRG00005013629)	RNASEL (ENSCDRG00005013815)	RGS16 (ENSCDRG00005013860)	RGS8 (ENSCDRG00005013903)	NPL (ENSCDRG00005014005)	DHX9 (ENSCDRG00005014261)	SHCBP1L (ENSCDRG00005014363)
Arabian camel	MODERN SPECIES	35	USF2 (ENSCDRG00005007447)	ENSCDRG00005007661	ENSCDRG00005007800	ENSCDRG00005007999	ENSCDRG00005008425	ENSCDRG00005008772	LGI4 (ENSCDRG00005009089)	FXYD3 (ENSCDRG00005009383)	HPN (ENSCDRG00005009787)	SCN1B (ENSCDRG00005010149)	GRAMD1A (ENSCDRG00005010534)	ZNF792 (ENSCDRG00005011807)	ENSCDRG00005012029	ENSCDRG00005012136	ENSCDRG00005012360	ENSCDRG00005012543 #22	ZNF599 (ENSCDRG00005012866)	ENSCDRG00005013282	ENSCDRG00005013626	ENSCDRG00005013802	ENSCDRG00005013890	WTIP (ENSCDRG00005014097)	ENSCDRG00005014244	UBA2 (ENSCDRG00005014360)	PDCD2L (ENSCDRG00005014775)	GPI (ENSCDRG00005015064)	GARRE1 (ENSCDRG00005015403)	LSM14A (ENSCDRG00005015883)	ENSCDRG00005016335	KCTD15 (ENSCDRG00005016516)	CHST8 (ENSCDRG00005016814)
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Cetacea	ANCESTRAL SPECIES	8	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Blue whale	MODERN SPECIES	1	POLR2F (ENSBMSG00010009468) #7	SOX10 (ENSBMSG00010009500) #8	PICK1 (ENSBMSG00010009504) #9	SLC16A8 (ENSBMSG00010009515) #10	BAIAP2L2 (ENSBMSG00010009527) #11	PLA2G6 (ENSBMSG00010009578) #12	MAFF (ENSBMSG00010009718) #13	TMEM184B (ENSBMSG00010009730) #14	CSNK1E (ENSBMSG00010009741) #15	KCNJ4 (ENSBMSG00010009750) #16	KDELR3 (ENSBMSG00010009761) #17	DDX17 (ENSBMSG00010009785) #18	DMC1 (ENSBMSG00010009822) #19	FAM227A (ENSBMSG00010009890) #20	CBY1 (ENSBMSG00010009929) #21	TOMM22 (ENSBMSG00010009939) #22	JOSD1 (ENSBMSG00010009958) #23	GTPBP1 (ENSBMSG00010009969) #24	SUN2 (ENSBMSG00010009997) #25	DNAL4 (ENSBMSG00010010042) #26	NPTXR (ENSBMSG00010010056) #27	CBX6 (ENSBMSG00010010075) #28	ENSBMSG00010010091	ENSBMSG00010010119	ENSBMSG00010010126	ENSBMSG00010010140	PDGFB (ENSBMSG00010010151) #30	RPL3 (ENSBMSG00010010164) #31	SYNGR1 (ENSBMSG00010010187) #32	TAB1 (ENSBMSG00010010202) #33	MGAT3 (ENSBMSG00010010217) #34
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00990000212395	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Sperm whale	MODERN SPECIES	1049																TOMM22 (ENSPCTG00005016219) #22	JOSD1 (ENSPCTG00005016276) #23	GTPBP1 (ENSPCTG00005016302) #24
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00990000212395	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Dolphin	MODERN SPECIES	3076				PICK1 (ENSTTRG00000005614) #9	SLC16A8 (ENSTTRG00000005615) #10	BAIAP2L2 (ENSTTRG00000005616) #11	PLA2G6 (ENSTTRG00000005617) #12	MAFF (ENSTTRG00000005618) #13	TMEM184B (ENSTTRG00000005619) #14	CSNK1E (ENSTTRG00000005620) #15	KDELR3 (ENSTTRG00000005622) #17	DDX17 (ENSTTRG00000005623) #18	DMC1 (ENSTTRG00000005624) #19	FAM227A (ENSTTRG00000005625) #20	CBY1 (ENSTTRG00000005626) #21	TOMM22 (ENSTTRG00000005627) #22	JOSD1 (ENSTTRG00000005628) #23	GTPBP1 (ENSTTRG00000005629) #24	SUN2 (ENSTTRG00000005630) #25	DNAL4 (ENSTTRG00000005631) #26
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b.n.a.a #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00990000212395	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b.n.a.a #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00990000212395	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Narwhal	MODERN SPECIES	313	POLR2F (ENSMMNG00015019190) #7	SOX10 (ENSMMNG00015019231) #8	PICK1 (ENSMMNG00015019255) #9	SLC16A8 (ENSMMNG00015019304) #10	BAIAP2L2 (ENSMMNG00015019337) #11	PLA2G6 (ENSMMNG00015019408) #12	MAFF (ENSMMNG00015019461) #13	TMEM184B (ENSMMNG00015019489) #14	CSNK1E (ENSMMNG00015019527) #15	KCNJ4 (ENSMMNG00015019556) #16	KDELR3 (ENSMMNG00015019578) #17	DDX17 (ENSMMNG00015019596) #18	DMC1 (ENSMMNG00015019639) #19	FAM227A (ENSMMNG00015019747) #20	CBY1 (ENSMMNG00015019796) #21	TOMM22 (ENSMMNG00015019815) #22	ENSMMNG00015019845 #23	GTPBP1 (ENSMMNG00015019885) #24	SUN2 (ENSMMNG00015019962) #25	DNAL4 (ENSMMNG00015020017) #26	NPTXR (ENSMMNG00015020037) #27	CBX6 (ENSMMNG00015020063) #28	ENSMMNG00015020087	ENSMMNG00015020113	ENSMMNG00015020146	CBX7 (ENSMMNG00015020192) #29	PDGFB (ENSMMNG00015020223) #30	ENSMMNG00015020253 #31	SYNGR1 (ENSMMNG00015020318) #32	TAB1 (ENSMMNG00015020340) #33	MGAT3 (ENSMMNG00015020365) #34
Beluga whale	MODERN SPECIES	111	SOX10 (ENSDLEG00000010279) #8	PICK1 (ENSDLEG00000010290) #9	SLC16A8 (ENSDLEG00000010317) #10	ENSDLEG00000010334 #11	ENSDLEG00000010350 #11	PLA2G6 (ENSDLEG00000010387) #12	MAFF (ENSDLEG00000010448) #13	TMEM184B (ENSDLEG00000010460) #14	CSNK1E (ENSDLEG00000010495) #15	KCNJ4 (ENSDLEG00000010514) #16	KDELR3 (ENSDLEG00000010524) #17	DDX17 (ENSDLEG00000010540) #18	DMC1 (ENSDLEG00000010573) #19	FAM227A (ENSDLEG00000010601) #20	CBY1 (ENSDLEG00000010665) #21	TOMM22 (ENSDLEG00000010679) #22	JOSD1 (ENSDLEG00000010710) #23	GTPBP1 (ENSDLEG00000010729) #24	SUN2 (ENSDLEG00000010752) #25	ENSDLEG00000010784	NPTXR (ENSDLEG00000010814) #27	CBX6 (ENSDLEG00000010926) #28	ENSDLEG00000010937	ENSDLEG00000010949	ENSDLEG00000010951	CBX7 (ENSDLEG00000010991) #29	PDGFB (ENSDLEG00000011004) #30	RPL3 (ENSDLEG00000011031) #31	SYNGR1 (ENSDLEG00000011082) #32	TAB1 (ENSDLEG00000011106) #33	MGAT3 (ENSDLEG00000011132) #34
Vaquita	MODERN SPECIES	1	SOX10 (ENSPSNG00000004580) #8	POLR2F (ENSPSNG00000004546) #7	PICK1 (ENSPSNG00000004490) #9	SLC16A8 (ENSPSNG00000004475) #10	BAIAP2L2 (ENSPSNG00000004407) #11	PLA2G6 (ENSPSNG00000004332) #12	MAFF (ENSPSNG00000004304) #13	TMEM184B (ENSPSNG00000004271) #14	CSNK1E (ENSPSNG00000004204) #15	KCNJ4 (ENSPSNG00000004159) #16	KDELR3 (ENSPSNG00000011088) #17	DDX17 (ENSPSNG00000011022) #18	DMC1 (ENSPSNG00000010664) #19	FAM227A (ENSPSNG00000010389) #20	CBY1 (ENSPSNG00000010314) #21	TOMM22 (ENSPSNG00000010264) #22	ENSPSNG00000010230 #23	GTPBP1 (ENSPSNG00000010180) #24	SUN2 (ENSPSNG00000010099) #25	DNAL4 (ENSPSNG00000010021) #26	NPTXR (ENSPSNG00000009945) #27	CBX6 (ENSPSNG00000009872) #28	ENSPSNG00000009770	ENSPSNG00000009731	ENSPSNG00000009704	CBX7 (ENSPSNG00000009664) #29	PDGFB (ENSPSNG00000009582) #30	ENSPSNG00000009490 #31	SYNGR1 (ENSPSNG00000009432) #32	TAB1 (ENSPSNG00000009365) #33	MGAT3 (ENSPSNG00000009308) #34
Pecora	ANCESTRAL SPECIES	3	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Yarkand deer	MODERN SPECIES	14	SOX10 (ENSCHYG00000027218) #8	PICK1 (ENSCHYG00000027219) #9	SLC16A8 (ENSCHYG00000027220) #10	BAIAP2L2 (ENSCHYG00000027221) #11	PLA2G6 (ENSCHYG00000027222) #12	MAFF (ENSCHYG00000027223) #13	TMEM184B (ENSCHYG00000027224) #14	CSNK1E (ENSCHYG00000027225) #15	KCNJ4 (ENSCHYG00000027226) #16	KDELR3 (ENSCHYG00000027227) #17	DDX17 (ENSCHYG00000027228) #18	DMC1 (ENSCHYG00000027229) #19	ENSCHYG00000027230	FAM227A (ENSCHYG00000027231) #20	CBY1 (ENSCHYG00000013615) #21	TOMM22 (ENSCHYG00000013666) #22	ENSCHYG00000013711 #23	GTPBP1 (ENSCHYG00000013769) #24	SUN2 (ENSCHYG00000013967) #25	ENSCHYG00000014083	NPTXR (ENSCHYG00000014182) #27	CBX6 (ENSCHYG00000014265) #28	ENSCHYG00000014362	ENSCHYG00000014411	ENSCHYG00000014519	ENSCHYG00000014751	CBX7 (ENSCHYG00000014771) #29	PDGFB (ENSCHYG00000014910) #30	ENSCHYG00000015017 #31	SYNGR1 (ENSCHYG00000015317) #32	TAB1 (ENSCHYG00000015486) #33
Percora_a	ANCESTRAL SPECIES	3	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000010415.a #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00390000002407.d.x	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Caprinae	ANCESTRAL SPECIES		ENSGT00390000010415.a #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00390000002407.d.x	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Rambouillet Sheep	MODERN SPECIES	19	POLR2F (ENSOARG00020008052) #7	SOX10 (ENSOARG00020008279) #8	PICK1 (ENSOARG00020008330) #9	SLC16A8 (ENSOARG00020008390) #10	BAIAP2L2 (ENSOARG00020008456) #11	PLA2G6 (ENSOARG00020008751) #12	MAFF (ENSOARG00020009041) #13	TMEM184B (ENSOARG00020009079) #14	CSNK1E (ENSOARG00020009137) #15	KCNJ4 (ENSOARG00020009164) #16	KDELR3 (ENSOARG00020009181) #17	DDX17 (ENSOARG00020009246) #18	DMC1 (ENSOARG00020009462) #19	FAM227A (ENSOARG00020010830) #20	CBY1 (ENSOARG00020010987) #21	TOMM22 (ENSOARG00020011046) #22	JOSD1 (ENSOARG00020011101) #23	GTPBP1 (ENSOARG00020011180) #24	SUN2 (ENSOARG00020011347) #25	DNAL4 (ENSOARG00020011506) #26	NPTXR (ENSOARG00020011569) #27	CBX6 (ENSOARG00020011626) #28	APOBEC3Z1 (ENSOARG00020011689)	APOBEC3Z3 (ENSOARG00020011837)	CBX7 (ENSOARG00020012086) #29	PDGFB (ENSOARG00020012236) #30	RPL3 (ENSOARG00020012384) #31	SYNGR1 (ENSOARG00020012529) #32	TAB1 (ENSOARG00020012878) #33	MGAT3 (ENSOARG00020013113) #34	ENSOARG00020013145
Goat	MODERN SPECIES	24	SOX10 (ENSCHIG00000020140) #8	PICK1 (ENSCHIG00000011880) #9	SLC16A8 (ENSCHIG00000015529) #10	BAIAP2L2 (ENSCHIG00000017307) #11	PLA2G6 (ENSCHIG00000021402) #12	MAFF (ENSCHIG00000011957) #13	TMEM184B (ENSCHIG00000023262) #14	CSNK1E (ENSCHIG00000022992) #15	KCNJ4 (ENSCHIG00000008292) #16	KDELR3 (ENSCHIG00000014466) #17	DDX17 (ENSCHIG00000021332) #18	DMC1 (ENSCHIG00000025073) #19	FAM227A (ENSCHIG00000022945) #20	ENSCHIG00000014677 #21	ENSCHIG00000014892 #21	TOMM22 (ENSCHIG00000026278) #22	JOSD1 (ENSCHIG00000021625) #23	GTPBP1 (ENSCHIG00000015505) #24	SUN2 (ENSCHIG00000011254) #25	DNAL4 (ENSCHIG00000018875) #26	NPTXR (ENSCHIG00000026587) #27	CBX6 (ENSCHIG00000025856) #28	ENSCHIG00000012694	ENSCHIG00000014670	ENSCHIG00000026580	CBX7 (ENSCHIG00000023361) #29	PDGFB (ENSCHIG00000025693) #30	ENSCHIG00000025454 #31	SYNGR1 (ENSCHIG00000018332) #32	TAB1 (ENSCHIG00000014927) #33	MGAT3 (ENSCHIG00000008357) #34
Bovinae	ANCESTRAL SPECIES	10	ENSGT00390000010415.a #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000167817	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Bos	ANCESTRAL SPECIES	2	ENSGT00390000010415.a #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000167817	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Bos_b	ANCESTRAL SPECIES	30	ENSGT00390000010415.a #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000167817	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Hybrid Bos Indicus	MODERN SPECIES	24	PICK1 (ENSBIXG00005026723) #9	SLC16A8 (ENSBIXG00005026757) #10	BAIAP2L2 (ENSBIXG00005026798) #11	PLA2G6 (ENSBIXG00005004600) #12	MAFF (ENSBIXG00005026962) #13	TMEM184B (ENSBIXG00005026999) #14	CSNK1E (ENSBIXG00005005605) #15	KCNJ4 (ENSBIXG00005027098) #16	KDELR3 (ENSBIXG00005027132) #17	DDX17 (ENSBIXG00005004665) #18	DMC1 (ENSBIXG00005007750) #19	ENSBIXG00005027244 #20	ENSBIXG00005005609	CBY1 (ENSBIXG00005027310) #21	JOSD1 (ENSBIXG00005027329) #23	ENSBIXG00005004713 #22	ENSBIXG00005027362	GTPBP1 (ENSBIXG00005027435) #24	SUN2 (ENSBIXG00005027478) #25	ENSBIXG00005004740	NPTXR (ENSBIXG00005006624) #27	CBX6 (ENSBIXG00005027631) #28	ENSBIXG00005027653	ENSBIXG00005027665	ENSBIXG00005027698	ENSBIXG00005027734	CBX7 (ENSBIXG00005027759) #29	PDGFB (ENSBIXG00005027799) #30	ENSBIXG00005027866 #31	SYNGR1 (ENSBIXG00005027936) #32	TAB1 (ENSBIXG00005028001) #33
Cow	MODERN SPECIES	24	SOX10 (ENSBTAG00000004822) #8	PICK1 (ENSBTAG00000015268) #9	SLC16A8 (ENSBTAG00000015275) #10	BAIAP2L2 (ENSBTAG00000015290) #11	PLA2G6 (ENSBTAG00000014015) #12	MAFF (ENSBTAG00000021435) #13	TMEM184B (ENSBTAG00000009668) #14	CSNK1E (ENSBTAG00000047582) #15	KCNJ4 (ENSBTAG00000051965) #16	KDELR3 (ENSBTAG00000009886) #17	DDX17 (ENSBTAG00000009887) #18	DMC1 (ENSBTAG00000005936) #19	ENSBTAG00000048693	FAM227A (ENSBTAG00000010573) #20	CBY1 (ENSBTAG00000006588) #21	TOMM22 (ENSBTAG00000010157) #22	GTPBP1 (ENSBTAG00000010324) #24	SUN2 (ENSBTAG00000003693) #25	DNAL4 (ENSBTAG00000049822) #26	NPTXR (ENSBTAG00000000109) #27	CBX6 (ENSBTAG00000046724) #28	APOBEC3Z1 (ENSBTAG00000037800)	ENSBTAG00000051824	APOBEC3H (ENSBTAG00000007755)	CBX7 (ENSBTAG00000007228) #29	PDGFB (ENSBTAG00000021697) #30	RPL3 (ENSBTAG00000003228) #31	SYNGR1 (ENSBTAG00000005765) #32	TAB1 (ENSBTAG00000019828) #33	MGAT3 (ENSBTAG00000012503) #34	MIEF1 (ENSBTAG00000017439) #35
Bos_a	ANCESTRAL SPECIES	24	ENSGT00390000010415.a #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000167817	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j.l #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Wild yak	MODERN SPECIES	1096										KCNJ4 (ENSBMUG00000026372) #16	KDELR3 (ENSBMUG00000026373) #17	DDX17 (ENSBMUG00000026380) #18	DMC1 (ENSBMUG00000026383) #19	FAM227A (ENSBMUG00000026388) #20	CBY1 (ENSBMUG00000026392) #21	TOMM22 (ENSBMUG00000026394) #22	JOSD1 (ENSBMUG00000026395) #23	GTPBP1 (ENSBMUG00000000156) #24	SUN2 (ENSBMUG00000000201) #25	ENSBMUG00000000219	NPTXR (ENSBMUG00000000235) #27	CBX6 (ENSBMUG00000000256) #28	ENSBMUG00000000282	ENSBMUG00000000336	ENSBMUG00000000388	CBX7 (ENSBMUG00000000416) #29	PDGFB (ENSBMUG00000000434) #30	RPL3 (ENSBMUG00000000471) #31	SYNGR1 (ENSBMUG00000000543) #32	TAB1 (ENSBMUG00000000592) #33	MGAT3 (ENSBMUG00000000609) #34
Domestic yak	MODERN SPECIES	24	ENSBGRG00000002013 #7	SOX10 (ENSBGRG00000002144) #8	PICK1 (ENSBGRG00000002191) #9	SLC16A8 (ENSBGRG00000002277) #10	BAIAP2L2 (ENSBGRG00000002297) #11	PLA2G6 (ENSBGRG00000002359) #12	MAFF (ENSBGRG00000002378) #13	TMEM184B (ENSBGRG00000002396) #14	CSNK1E (ENSBGRG00000002435) #15	KCNJ4 (ENSBGRG00000002488) #16	KDELR3 (ENSBGRG00000002514) #17	DDX17 (ENSBGRG00000002557) #18	DMC1 (ENSBGRG00000002636) #19	ENSBGRG00000002664	ENSBGRG00000002697 #21	TOMM22 (ENSBGRG00000002734) #22	JOSD1 (ENSBGRG00000002758) #23	GTPBP1 (ENSBGRG00000002786) #24	SUN2 (ENSBGRG00000002838) #25	ENSBGRG00000002912	NPTXR (ENSBGRG00000002926) #27	CBX6 (ENSBGRG00000002934) #28	ENSBGRG00000002965	ENSBGRG00000002985	ENSBGRG00000002993	APOBEC3Z3 (ENSBGRG00000003021)	CBX7 (ENSBGRG00000003055) #29	PDGFB (ENSBGRG00000003093) #30	RPL3 (ENSBGRG00000003124) #31	ENSBGRG00000003220 #32	TAB1 (ENSBGRG00000003258) #33
American bison	MODERN SPECIES	3130	ENSBBBG00000005101 #7	SOX10 (ENSBBBG00000005409) #8	PICK1 (ENSBBBG00000019999) #9	SLC16A8 (ENSBBBG00000019982) #10	BAIAP2L2 (ENSBBBG00000019976) #11	PLA2G6 (ENSBBBG00000019934) #12	MAFF (ENSBBBG00000019848) #13	TMEM184B (ENSBBBG00000005369) #14	CSNK1E (ENSBBBG00000019815) #15	KCNJ4 (ENSBBBG00000005145) #16	KDELR3 (ENSBBBG00000019779) #17	DDX17 (ENSBBBG00000019756) #18	DMC1 (ENSBBBG00000019709) #19	FAM227A (ENSBBBG00000005333) #20	CBY1 (ENSBBBG00000005188) #21	TOMM22 (ENSBBBG00000019653) #22	JOSD1 (ENSBBBG00000019642) #23	GTPBP1 (ENSBBBG00000019626) #24	SUN2 (ENSBBBG00000019604) #25	DNAL4 (ENSBBBG00000019565) #26	NPTXR (ENSBBBG00000019555) #27	ENSBBBG00000005287	ENSBBBG00000005265	ENSBBBG00000005262	ENSBBBG00000005258	CBX7 (ENSBBBG00000005251) #29	PDGFB (ENSBBBG00000019475) #30	RPL3 (ENSBBBG00000008662) #31	SYNGR1 (ENSBBBG00000019431) #32	TAB1 (ENSBBBG00000005150) #33	NRIP1 (ENSBBBG00000019374)
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1222							ENSMMSG00000018966	SYNPR (ENSMMSG00000019035)	SNTN (ENSMMSG00000019427)	ENSMMSG00000019453	C3orf49 (ENSMMSG00000019471)	THOC7 (ENSMMSG00000019508)	ATXN7 (ENSMMSG00000019544)	PSMD6 (ENSMMSG00000019578)	PRICKLE2 (ENSMMSG00000019648)	ENSMMSG00000019702 #22	ADAMTS9 (ENSMMSG00000019756)	ENSMMSG00000020165	MAGI1 (ENSMMSG00000020250)	SLC25A26 (ENSMMSG00000021168)	LRIG1 (ENSMMSG00000021235)	ENSMMSG00000021329	KBTBD8 (ENSMMSG00000021352)	ENSMMSG00000021399	SUCLG2 (ENSMMSG00000021420)	TAFA1 (ENSMMSG00000021464)	TAFA4 (ENSMMSG00000021498)	EOGT (ENSMMSG00000021538)	TMF1 (ENSMMSG00000013641)	UBA3 (ENSMMSG00000013729)	ARL6IP5 (ENSMMSG00000013836)
Siberian musk deer	MODERN SPECIES	1247	PICK1 (ENSMMSG00000017236) #9	SLC16A8 (ENSMMSG00000017176) #10	BAIAP2L2 (ENSMMSG00000017039) #11	ENSMMSG00000017006	PLA2G6 (ENSMMSG00000016959) #12	MAFF (ENSMMSG00000016934) #13	TMEM184B (ENSMMSG00000016881) #14	ENSMMSG00000016861	CSNK1E (ENSMMSG00000016744) #15	KCNJ4 (ENSMMSG00000016714) #16	KDELR3 (ENSMMSG00000016681) #17	DDX17 (ENSMMSG00000016642) #18	DMC1 (ENSMMSG00000016408) #19	FAM227A (ENSMMSG00000016242) #20	CBY1 (ENSMMSG00000016196) #21	TOMM22 (ENSMMSG00000016177) #22	JOSD1 (ENSMMSG00000016158) #23	GTPBP1 (ENSMMSG00000016125) #24	SUN2 (ENSMMSG00000016072) #25	DNAL4 (ENSMMSG00000016031) #26	NPTXR (ENSMMSG00000015982) #27	CBX6 (ENSMMSG00000015947) #28	ENSMMSG00000015829	ENSMMSG00000015802	CBX7 (ENSMMSG00000015769) #29	PDGFB (ENSMMSG00000015748) #30	ENSMMSG00000015685 #31	SYNGR1 (ENSMMSG00000015640) #32	TAB1 (ENSMMSG00000015603) #33	MGAT3 (ENSMMSG00000015591) #34	MIEF1 (ENSMMSG00000015569) #35
Eulipotyphla	ANCESTRAL SPECIES	2191																ENSGT00390000016475 #22	ENSGT00390000009228.b #23
Hedgehog	MODERN SPECIES	7661																TOMM22 (ENSEEUG00000006428) #22	JOSD1 (ENSEEUG00000006494) #23
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Primates	ANCESTRAL SPECIES	6	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695.h	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.p	ENSGT00940000161999.o	ENSGT00940000162695.h	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Mouse lemur	MODERN SPECIES	29	SOX10 (ENSMICG00000013132) #8	PICK1 (ENSMICG00000046407) #9	SLC16A8 (ENSMICG00000044503) #10	BAIAP2L2 (ENSMICG00000002823) #11	PLA2G6 (ENSMICG00000011552) #12	MAFF (ENSMICG00000028915) #13	TMEM184B (ENSMICG00000038265) #14	CSNK1E (ENSMICG00000011583) #15	KCNJ4 (ENSMICG00000045155) #16	KDELR3 (ENSMICG00000011590) #17	DDX17 (ENSMICG00000011601) #18	ENSMICG00000042647	DMC1 (ENSMICG00000009723) #19	FAM227A (ENSMICG00000011770) #20	CBY1 (ENSMICG00000011786) #21	TOMM22 (ENSMICG00000036077) #22	JOSD1 (ENSMICG00000045787) #23	GTPBP1 (ENSMICG00000034218) #24	SUN2 (ENSMICG00000011818) #25	DNAL4 (ENSMICG00000038096) #26	NPTXR (ENSMICG00000006434) #27	CBX6 (ENSMICG00000029779) #28	ENSMICG00000047191	ENSMICG00000043748	ENSMICG00000042615	ENSMICG00000041647	ENSMICG00000042733	CBX7 (ENSMICG00000033358) #29	PDGFB (ENSMICG00000028335) #30	RPL3 (ENSMICG00000015832) #31	SYNGR1 (ENSMICG00000015846) #32
Lemuriformes_a	ANCESTRAL SPECIES	38	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.p	ENSGT00940000161999.o	ENSGT00940000162695.h	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34
Coquerels sifaka	MODERN SPECIES	131	SOX10 (ENSPCOG00000022365) #8	PICK1 (ENSPCOG00000027409) #9	SLC16A8 (ENSPCOG00000013553) #10	BAIAP2L2 (ENSPCOG00000023090) #11	PLA2G6 (ENSPCOG00000015052) #12	MAFF (ENSPCOG00000023065) #13	TMEM184B (ENSPCOG00000027866) #14	CSNK1E (ENSPCOG00000016147) #15	KCNJ4 (ENSPCOG00000009264) #16	KDELR3 (ENSPCOG00000014879) #17	DDX17 (ENSPCOG00000014360) #18	ENSPCOG00000027948	DMC1 (ENSPCOG00000024951) #19	FAM227A (ENSPCOG00000019885) #20	ENSPCOG00000027064 #21	TOMM22 (ENSPCOG00000027136) #22	JOSD1 (ENSPCOG00000026479) #23	GTPBP1 (ENSPCOG00000028734) #24	SUN2 (ENSPCOG00000016449) #25	DNAL4 (ENSPCOG00000024283) #26	NPTXR (ENSPCOG00000024056) #27	CBX6 (ENSPCOG00000021741) #28	ENSPCOG00000016357	ENSPCOG00000017606	ENSPCOG00000022067	CBX7 (ENSPCOG00000018587) #29	PDGFB (ENSPCOG00000010090) #30	ENSPCOG00000027786 #31	SYNGR1 (ENSPCOG00000014563) #32	TAB1 (ENSPCOG00000022423) #33	MGAT3 (ENSPCOG00000011823) #34
Greater bamboo lemur	MODERN SPECIES	231	SOX10 (ENSPSMG00000005923) #8	POLR2F (ENSPSMG00000005883) #7	PICK1 (ENSPSMG00000005831) #9	SLC16A8 (ENSPSMG00000005805) #10	BAIAP2L2 (ENSPSMG00000005799) #11	PLA2G6 (ENSPSMG00000005585) #12	MAFF (ENSPSMG00000005501) #13	TMEM184B (ENSPSMG00000005494) #14	CSNK1E (ENSPSMG00000005408) #15	KCNJ4 (ENSPSMG00000005338) #16	KDELR3 (ENSPSMG00000005334) #17	DDX17 (ENSPSMG00000005267) #18	DMC1 (ENSPSMG00000005197) #19	FAM227A (ENSPSMG00000005162) #20	CBY1 (ENSPSMG00000005125) #21	TOMM22 (ENSPSMG00000005113) #22	JOSD1 (ENSPSMG00000005106) #23	GTPBP1 (ENSPSMG00000005095) #24	SUN2 (ENSPSMG00000005062) #25	DNAL4 (ENSPSMG00000005030) #26	ENSPSMG00000005024 #27	CBX6 (ENSPSMG00000005006) #28	ENSPSMG00000004995	ENSPSMG00000004595	CBX7 (ENSPSMG00000004086) #29	PDGFB (ENSPSMG00000004067) #30	ENSPSMG00000004038 #31	SYNGR1 (ENSPSMG00000004013) #32	TAB1 (ENSPSMG00000003941) #33	MGAT3 (ENSPSMG00000003826) #34	ENSPSMG00000003819
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	122	POLR2F (ENSOGAG00000025463) #7	SOX10 (ENSOGAG00000030629) #8	PICK1 (ENSOGAG00000015377) #9	SLC16A8 (ENSOGAG00000031049) #10	BAIAP2L2 (ENSOGAG00000033044) #11	PLA2G6 (ENSOGAG00000009998) #12	MAFF (ENSOGAG00000027848) #13	TMEM184B (ENSOGAG00000000862) #14	CSNK1E (ENSOGAG00000001532) #15	KCNJ4 (ENSOGAG00000001534) #16	KDELR3 (ENSOGAG00000001537) #17	DDX17 (ENSOGAG00000001539) #18	DMC1 (ENSOGAG00000003237) #19	FAM227A (ENSOGAG00000032247) #20	CBY1 (ENSOGAG00000028533) #21	ENSOGAG00000029583 #22	JOSD1 (ENSOGAG00000007520) #23	GTPBP1 (ENSOGAG00000000514) #24	SUN2 (ENSOGAG00000000515) #25	DNAL4 (ENSOGAG00000000516) #26	CBX6 (ENSOGAG00000027969) #28	ENSOGAG00000032518	ENSOGAG00000024822	ENSOGAG00000032498	CBX7 (ENSOGAG00000000029) #29	PDGFB (ENSOGAG00000000031) #30	ENSOGAG00000000032 #31	TAB1 (ENSOGAG00000000035) #33	MGAT3 (ENSOGAG00000029148) #34	MIEF1 (ENSOGAG00000000037) #35	ATF4 (ENSOGAG00000033566) #36
Bushbaby	MODERN SPECIES	135	SAMD15 (ENSOGAG00000006201)	TMED8 (ENSOGAG00000006200)	GSTZ1 (ENSOGAG00000006199)	POMT2 (ENSOGAG00000006197)	NGB (ENSOGAG00000006194)	TMEM63C (ENSOGAG00000006191)	ENSOGAG00000027411	ZDHHC22 (ENSOGAG00000030482)	CIPC (ENSOGAG00000025881)	ENSOGAG00000027649	IRF2BPL (ENSOGAG00000034922)	LRRC74A (ENSOGAG00000026924)	ANGEL1 (ENSOGAG00000000180)	VASH1 (ENSOGAG00000000669)	ESRRB (ENSOGAG00000008646)	ENSOGAG00000032435 #22	GPATCH2L (ENSOGAG00000009392)	ENSOGAG00000034452	TGFB3 (ENSOGAG00000009386)	TTLL5 (ENSOGAG00000009371)	ERG28 (ENSOGAG00000009368)	FLVCR2 (ENSOGAG00000010134)	BATF (ENSOGAG00000010133)	JDP2 (ENSOGAG00000024796)	FOS (ENSOGAG00000032356)	TMED10 (ENSOGAG00000028272)	NEK9 (ENSOGAG00000008245)	ZC2HC1C (ENSOGAG00000032675)	ENSOGAG00000029028	MLH3 (ENSOGAG00000008240)	EIF2B2 (ENSOGAG00000008234)
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475 #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b ##31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33
Tarsier	MODERN SPECIES	6299														FAM227A (ENSTSYG00000014703) #20	CBY1 (ENSTSYG00000001191) #21	TOMM22 (ENSTSYG00000033257) #22	JOSD1 (ENSTSYG00000008846) #23	GTPBP1 (ENSTSYG00000008856) #24	SUN2 (ENSTSYG00000002174) #25	DNAL4 (ENSTSYG00000032235) #26	NPTXR (ENSTSYG00000034628) #27	CBX6 (ENSTSYG00000028926) #28
Simiiformes	DUPLICATION
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a #22
Catarrhini	DUPLICATION
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00910000147822	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00910000148293	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00910000148293	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00910000148293	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00910000148293	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265
Pan	ANCESTRAL SPECIES	16	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000043468	PNLIPRP2 (ENSPTRG00000050694)	C10H10orf82 (ENSPTRG00000002973)	HSPA12A (ENSPTRG00000002974)	ENO4 (ENSPTRG00000002975)	SHTN1 (ENSPTRG00000002976)	VAX1 (ENSPTRG00000045431)	KCNK18 (ENSPTRG00000002978)	SLC18A2 (ENSPTRG00000002979)	PDZD8 (ENSPTRG00000002980)	EMX2 (ENSPTRG00000002981)	RAB11FIP2 (ENSPTRG00000002982)	ENSPTRG00000046689	FAM204A (ENSPTRG00000002984)	PRLHR (ENSPTRG00000002985)	ENSPTRG00000049526 #22	CACUL1 (ENSPTRG00000002986)	NANOS1 (ENSPTRG00000013314)	EIF3A (ENSPTRG00000002988)	DENND10 (ENSPTRG00000002989)	SFXN4 (ENSPTRG00000002990)	PRDX3 (ENSPTRG00000002992)	GRK5 (ENSPTRG00000002993)	RGS10 (ENSPTRG00000002995)	TIAL1 (ENSPTRG00000002996)	ENSPTRG00000046181	ENSPTRG00000040193	BAG3 (ENSPTRG00000002998)	ENSPTRG00000051748	INPP5F (ENSPTRG00000022873)	MCMBP (ENSPTRG00000003000)
Gorilla	MODERN SPECIES	1	ENSGGOG00000001086	PNLIPRP2 (ENSGGOG00000009570)	C10orf82 (ENSGGOG00000000980)	HSPA12A (ENSGGOG00000000981)	ENO4 (ENSGGOG00000012489)	SHTN1 (ENSGGOG00000012508)	ENSGGOG00000037135	KCNK18 (ENSGGOG00000027386)	SLC18A2 (ENSGGOG00000004379)	PDZD8 (ENSGGOG00000002530)	EMX2 (ENSGGOG00000016667)	RAB11FIP2 (ENSGGOG00000007213)	ENSGGOG00000037446	FAM204A (ENSGGOG00000010566)	PRLHR (ENSGGOG00000000672)	ENSGGOG00000028013 #22	CACUL1 (ENSGGOG00000001450)	EIF3A (ENSGGOG00000000036)	DENND10 (ENSGGOG00000000888)	SFXN4 (ENSGGOG00000036305)	PRDX3 (ENSGGOG00000026364)	GRK5 (ENSGGOG00000011618)	ENSGGOG00000042904	RGS10 (ENSGGOG00000008414)	ENSGGOG00000041190	TIAL1 (ENSGGOG00000001816)	ENSGGOG00000024741	BAG3 (ENSGGOG00000011503)	ENSGGOG00000022627	INPP5F (ENSGGOG00000005991)	MCMBP (ENSGGOG00000006006)
Gibbon	MODERN SPECIES	18	C10orf82 (ENSNLEG00000016494)	HSPA12A (ENSNLEG00000031134)	ENO4 (ENSNLEG00000016516)	SHTN1 (ENSNLEG00000016517)	ENSNLEG00000030624	VAX1 (ENSNLEG00000032960)	KCNK18 (ENSNLEG00000016567)	SLC18A2 (ENSNLEG00000016568)	ENSNLEG00000027748	EMX2 (ENSNLEG00000028193)	RAB11FIP2 (ENSNLEG00000016607)	ENSNLEG00000016621	ENSNLEG00000031592	FAM204A (ENSNLEG00000016624)	PRLHR (ENSNLEG00000016637)	ENSNLEG00000036076 #22	CACUL1 (ENSNLEG00000033485)	EIF3A (ENSNLEG00000016648)	DENND10 (ENSNLEG00000032443)	SFXN4 (ENSNLEG00000016685)	PRDX3 (ENSNLEG00000035268)	GRK5 (ENSNLEG00000016723)	RGS10 (ENSNLEG00000035071)	TIAL1 (ENSNLEG00000016743)	BAG3 (ENSNLEG00000016750)	ENSNLEG00000029480	INPP5F (ENSNLEG00000016753)	MCMBP (ENSNLEG00000016770)	SEC23IP (ENSNLEG00000016780)	PLPP4 (ENSNLEG00000028427)	WDR11 (ENSNLEG00000016815)
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00910000147822	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000173066	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265
Cercopithecinae_d	ANCESTRAL SPECIES	64	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000173066	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265
Drill	MODERN SPECIES	1373	PNLIPRP1 (ENSMLEG00000031655)	PNLIPRP2 (ENSMLEG00000043570)	C10orf82 (ENSMLEG00000019566)	HSPA12A (ENSMLEG00000039129)	ENO4 (ENSMLEG00000030373)	SHTN1 (ENSMLEG00000034796)	ENSMLEG00000030765	KCNK18 (ENSMLEG00000043402)	SLC18A2 (ENSMLEG00000033472)	PDZD8 (ENSMLEG00000033950)	EMX2 (ENSMLEG00000039220)	RAB11FIP2 (ENSMLEG00000040520)	ENSMLEG00000005933	FAM204A (ENSMLEG00000007355)	PRLHR (ENSMLEG00000014684)	ENSMLEG00000042362 #22	CACUL1 (ENSMLEG00000011976)	EIF3A (ENSMLEG00000032044)	DENND10 (ENSMLEG00000025579)	SFXN4 (ENSMLEG00000044253)	PRDX3 (ENSMLEG00000038508)	GRK5 (ENSMLEG00000015118)	RGS10 (ENSMLEG00000028058)	TIAL1 (ENSMLEG00000034719)	ENSMLEG00000036021	ENSMLEG00000042707	BAG3 (ENSMLEG00000040350)	INPP5F (ENSMLEG00000008038)	MCMBP (ENSMLEG00000037646)	SEC23IP (ENSMLEG00000030208)	PLPP4 (ENSMLEG00000039049)
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000162375	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00950000183135.B.b	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00940000160482	ENSGT00500000044913.b	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00940000158288
Pig-tailed macaque	MODERN SPECIES	90	PNLIPRP1 (ENSMNEG00000044722)	PNLIPRP2 (ENSMNEG00000042883)	C10orf82 (ENSMNEG00000031041)	HSPA12A (ENSMNEG00000035966)	ENO4 (ENSMNEG00000038465)	SHTN1 (ENSMNEG00000023707)	VAX1 (ENSMNEG00000042756)	KCNK18 (ENSMNEG00000037673)	SLC18A2 (ENSMNEG00000008691)	PDZD8 (ENSMNEG00000045026)	EMX2 (ENSMNEG00000027592)	RAB11FIP2 (ENSMNEG00000032231)	ENSMNEG00000032884	FAM204A (ENSMNEG00000042700)	PRLHR (ENSMNEG00000036983)	ENSMNEG00000029432 #22	CACUL1 (ENSMNEG00000035853)	NANOS1 (ENSMNEG00000022527)	EIF3A (ENSMNEG00000018271)	ENSMNEG00000036385	SFXN4 (ENSMNEG00000041851)	ENSMNEG00000043574	GRK5 (ENSMNEG00000041526)	RGS10 (ENSMNEG00000038381)	TIAL1 (ENSMNEG00000032245)	ENSMNEG00000039985	BAG3 (ENSMNEG00000042888)	INPP5F (ENSMNEG00000032634)	MCMBP (ENSMNEG00000039601)	SEC23IP (ENSMNEG00000045086)	PLPP4 (ENSMNEG00000036322)
Rhinopithecus	ANCESTRAL SPECIES	34	ENSGT00940000155139	ENSGT00390000017460	ENSGT00940000154551	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000161152	ENSGT00700000104522	ENSGT00940000157593	ENSGT00390000017746	ENSGT00940000157425.B	ENSGT00910000147822	ENSGT00940000158482	ENSGT00390000010476	ENSGT00390000008978.q.a.a	ENSGT00940000162008	ENSGT00390000016475.e.a.a.a #22	ENSGT00390000000403	ENSGT00730000111063	ENSGT00390000014431	ENSGT01030000234641.a.b	ENSGT00940000153430.a.b.r	ENSGT00940000160702.b	ENSGT00940000161426	ENSGT00910000147084	ENSGT00940000160482	ENSGT00940000159204	ENSGT00940000154259.k.a	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00940000158288
Golden snub-nosed monkey	MODERN SPECIES	2707	ENSRROG00000023559	C10orf82 (ENSRROG00000030318)	HSPA12A (ENSRROG00000035984)	ENO4 (ENSRROG00000034924)	SHTN1 (ENSRROG00000029712)	ENSRROG00000037617	KCNK18 (ENSRROG00000042605)	SLC18A2 (ENSRROG00000006390)	PDZD8 (ENSRROG00000033241)	EMX2 (ENSRROG00000045611)	ENSRROG00000019808	RAB11FIP2 (ENSRROG00000036710)	ENSRROG00000041894	ENSRROG00000028062	PRLHR (ENSRROG00000025056)	ENSRROG00000034665 #22	CACUL1 (ENSRROG00000036367)
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000163213.a.b	ENSGT00940000163440	ENSGT00940000162409	ENSGT00940000163419	ENSGT00940000160005.A	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00950000185226	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000162409	ENSGT00940000163440.b.b	ENSGT00940000160005.A.g	ENSGT00940000163440.a	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00950000185226	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00910000147216	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000163440.b.a	ENSGT00940000163419.g	ENSGT00940000162409	ENSGT00940000163440.b.b	ENSGT00940000160005.A.g	ENSGT00940000163440.a	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT01030000234595.A.a	ENSGT00910000147216	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000162341	ENSGT00940000154981	ENSGT00940000154174.s.a.a.a	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000163213.a.b.d	ENSGT00940000163440.b.a	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT01030000234595.A.a	ENSGT00910000147216	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Cercopithecinae_b	ANCESTRAL SPECIES	32				ENSGT00940000163213.a.b.d	ENSGT00940000163440.b.a	ENSGT00940000163440.a.a	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT01030000234595.A.a	ENSGT00910000147216	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Cercopithecinae_d	ANCESTRAL SPECIES	27						ENSGT00940000163440.a.a	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT01030000234595.A.a	ENSGT00910000147216	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT01050000244956.b.c.a.b	ENSGT00950000183134.c.a.a	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a	ENSGT00520000055616.b
Sooty mangabey	MODERN SPECIES	196					ENSCATG00000036232	ENSCATG00000032889	TRIM77 (ENSCATG00000032552)	FOLH1 (ENSCATG00000030078)	NOX4 (ENSCATG00000034813)	TYR (ENSCATG00000007854)	GRM5 (ENSCATG00000039645)	ENSCATG00000017286	CTSC (ENSCATG00000028370)	RAB38 (ENSCATG00000034576)	ENSCATG00000034224	ENSCATG00000032850 #22	TMEM135 (ENSCATG00000001206)	FZD4 (ENSCATG00000012598)	ENSCATG00000015649	ME3 (ENSCATG00000038267)	CCDC81 (ENSCATG00000042506)	HIKESHI (ENSCATG00000032118)	EED (ENSCATG00000032277)	ENSCATG00000037926	PICALM (ENSCATG00000044739)	CCDC83 (ENSCATG00000006895)	SYTL2 (ENSCATG00000031643)	CCDC89 (ENSCATG00000016164)	CREBZF (ENSCATG00000036954)	TMEM126A (ENSCATG00000029388)	TMEM126B (ENSCATG00000029506)
Drill	MODERN SPECIES	912					TRIM77 (ENSMLEG00000044304)	FOLH1 (ENSMLEG00000044022)	NOX4 (ENSMLEG00000040210)	TYR (ENSMLEG00000043191)	GRM5 (ENSMLEG00000042600)	ENSMLEG00000026308	CTSC (ENSMLEG00000032637)	RAB38 (ENSMLEG00000031633)	ENSMLEG00000039077	ENSMLEG00000033478	TMEM135 (ENSMLEG00000029558)	ENSMLEG00000041504 #22	FZD4 (ENSMLEG00000040936)	ME3 (ENSMLEG00000044075)	CCDC81 (ENSMLEG00000034883)	HIKESHI (ENSMLEG00000006177)	EED (ENSMLEG00000032137)	ENSMLEG00000035359	PICALM (ENSMLEG00000038207)	CCDC83 (ENSMLEG00000041777)	SYTL2 (ENSMLEG00000032099)	CREBZF (ENSMLEG00000040560)	TMEM126A (ENSMLEG00000034150)	TMEM126B (ENSMLEG00000038201)	ENSMLEG00000042181
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000162341	ENSGT00940000154981	ENSGT00940000154174.s.a.a.a	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.a.b	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000163440.b.a	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT01030000234595.A.a	ENSGT00910000147216	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a	ENSGT00520000055616.b.f
Pig-tailed macaque	MODERN SPECIES	423						ENSMNEG00000027943	TRIM77 (ENSMNEG00000034320)	FOLH1 (ENSMNEG00000038167)	NOX4 (ENSMNEG00000044084)	TYR (ENSMNEG00000036611)	GRM5 (ENSMNEG00000034358)	ENSMNEG00000018809	CTSC (ENSMNEG00000030747)	RAB38 (ENSMNEG00000027238)	ENSMNEG00000043896	ENSMNEG00000030149 #22	TMEM135 (ENSMNEG00000045398)	FZD4 (ENSMNEG00000029276)	ENSMNEG00000038710	ME3 (ENSMNEG00000015271)	CCDC81 (ENSMNEG00000033044)	HIKESHI (ENSMNEG00000035878)	EED (ENSMNEG00000027523)	ENSMNEG00000042451	PICALM (ENSMNEG00000029285)	CCDC83 (ENSMNEG00000042390)	SYTL2 (ENSMNEG00000012179)	CCDC89 (ENSMNEG00000023949)	CREBZF (ENSMNEG00000038550)	TMEM126A (ENSMNEG00000033570)	TMEM126B (ENSMNEG00000038548)
Rhinopithecus	ANCESTRAL SPECIES	265															ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00940000167729	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016589	ENSGT00520000055616.a	ENSGT00520000055616.b
Golden snub-nosed monkey	MODERN SPECIES	3048															ENSRROG00000029619	ENSRROG00000029825 #22	TMEM135 (ENSRROG00000026706)	FZD4 (ENSRROG00000009179)	ME3 (ENSRROG00000029877)	CCDC81 (ENSRROG00000034536)	HIKESHI (ENSRROG00000044938)	EED (ENSRROG00000033300)	ENSRROG00000043397	PICALM (ENSRROG00000042437)	CCDC83 (ENSRROG00000029691)
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000163213.a.b.b.a.b	ENSGT00940000163440.d	ENSGT00940000163419.c	ENSGT00940000163419.d.a.b	ENSGT00940000165665.b	ENSGT00940000163440.c	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000163440.d	ENSGT00940000163419.c	ENSGT00940000163419.d.a.a	ENSGT00940000163213.a.b.b.b	ENSGT00940000165665.b	ENSGT00940000163440.c	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00950000183134.c.a.a	ENSGT00940000164723	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000163213.a.b.b.a.a.b	ENSGT00940000163213.a.b.b.a.a.a.a	ENSGT00940000163440.d	ENSGT00940000163419.c	ENSGT00940000163213.a.b.b.b	ENSGT00940000165665.b.d	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00910000148359	ENSGT01050000244956.b.c.a.b	ENSGT00950000183134.c.a.a	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000154981	ENSGT00940000154174.s.a.a.a.a	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000163440.d	ENSGT00940000163419.c.b	ENSGT00940000165665.b.d	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00390000000155.a.a	ENSGT00910000148359	ENSGT01050000244956.b.c.a.b	ENSGT00950000183134.c.a.a	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589
Pan	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000163213.a.b.b.a.a.b	ENSGT00940000163440.d	ENSGT00940000163419.c.b	ENSGT00940000163213.a.b.b.b.b	ENSGT00940000165665.b.d	ENSGT00940000163778.d	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621	ENSGT00940000155336	ENSGT00910000147856	ENSGT01030000234595.A.a	ENSGT00940000155787	ENSGT00940000157301.b	ENSGT00910000146946	ENSGT00390000016475.e.a.a.b #22	ENSGT00390000000303	ENSGT00940000157141	ENSGT00910000148359	ENSGT01050000244956.b.c.a.b	ENSGT00950000183134.c.a.a	ENSGT00390000011985	ENSGT00390000004056	ENSGT00510000047334	ENSGT00550000074935.v	ENSGT00950000183068.a.b	ENSGT00390000013087	ENSGT00940000155843	ENSGT00390000016046	ENSGT00390000016589	ENSGT00520000055616.a
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000051439	CHORDC1 (ENSPTRG00000004164)	NAALAD2 (ENSPTRG00000004163)	ENSPTRG00000034335	ENSPTRG00000042732	ENSPTRG00000048980	ENSPTRG00000046171	ENSPTRG00000051097	FOLH1 (ENSPTRG00000004159)	NOX4 (ENSPTRG00000004156)	TYR (ENSPTRG00000004155)	ENSPTRG00000050427	GRM5 (ENSPTRG00000004153)	CTSC (ENSPTRG00000004152)	RAB38 (ENSPTRG00000004151)	ENSPTRG00000043512 #22	TMEM135 (ENSPTRG00000052201)	FZD4 (ENSPTRG00000004148)	ENSPTRG00000047974	ENSPTRG00000052198	ME3 (ENSPTRG00000004146)	CCDC81 (ENSPTRG00000004145)	HIKESHI (ENSPTRG00000004144)	EED (ENSPTRG00000047379)	ENSPTRG00000050577	PICALM (ENSPTRG00000004141)	CCDC83 (ENSPTRG00000004139)	SYTL2 (ENSPTRG00000004137)	CCDC89 (ENSPTRG00000028447)	CREBZF (ENSPTRG00000046588)	TMEM126A (ENSPTRG00000004134)
Bonobo	MODERN SPECIES	2	ENSPPAG00000039538	MTNR1B (ENSPPAG00000030637)	ENSPPAG00000042139	ENSPPAG00000040312	ENSPPAG00000027721	CHORDC1 (ENSPPAG00000029245)	NAALAD2 (ENSPPAG00000040316)	ENSPPAG00000040587	ENSPPAG00000043311	TYR (ENSPPAG00000028935)	ENSPPAG00000037909	GRM5 (ENSPPAG00000028715)	CTSC (ENSPPAG00000039886)	RAB38 (ENSPPAG00000037174)	ENSPPAG00000025428	ENSPPAG00000029704 #22	TMEM135 (ENSPPAG00000017375)	FZD4 (ENSPPAG00000039896)	ENSPPAG00000040183	ENSPPAG00000030561	ME3 (ENSPPAG00000027117)	CCDC81 (ENSPPAG00000033187)	HIKESHI (ENSPPAG00000037523)	EED (ENSPPAG00000042452)	ENSPPAG00000040243	PICALM (ENSPPAG00000036162)	CCDC83 (ENSPPAG00000018209)	SYTL2 (ENSPPAG00000031499)	CCDC89 (ENSPPAG00000024671)	CREBZF (ENSPPAG00000039767)	TMEM126A (ENSPPAG00000030419)
Gorilla	MODERN SPECIES	2	MTNR1B (ENSGGOG00000013924)	FAT3 (ENSGGOG00000017065)	CHORDC1 (ENSGGOG00000027396)	NAALAD2 (ENSGGOG00000034824)	ENSGGOG00000040268	ENSGGOG00000008355	ENSGGOG00000026540	ENSGGOG00000003220	TYR (ENSGGOG00000009122)	ENSGGOG00000043221	ENSGGOG00000024146	GRM5 (ENSGGOG00000008825)	CTSC (ENSGGOG00000002117)	RAB38 (ENSGGOG00000008277)	ENSGGOG00000043000	ENSGGOG00000038789 #22	TMEM135 (ENSGGOG00000002577)	FZD4 (ENSGGOG00000037053)	ENSGGOG00000043394	ENSGGOG00000037978	ME3 (ENSGGOG00000009837)	CCDC81 (ENSGGOG00000012103)	HIKESHI (ENSGGOG00000023168)	EED (ENSGGOG00000007517)	ENSGGOG00000024786	PICALM (ENSGGOG00000009116)	CCDC83 (ENSGGOG00000002315)	SYTL2 (ENSGGOG00000001830)	CCDC89 (ENSGGOG00000001828)	CREBZF (ENSGGOG00000006942)	TMEM126A (ENSGGOG00000027742)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a.b #22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a.b #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a.b #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a.b #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a.b #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a.b #22
Sooty mangabey	MODERN SPECIES	220															PLG (ENSCATG00000039756)	ENSCATG00000034269 #22	MAP3K4 (ENSCATG00000038027)	AGPAT4 (ENSCATG00000012223)	PRKN (ENSCATG00000033190)	PACRG (ENSCATG00000036404)	ENSCATG00000038866	ENSCATG00000037623	ENSCATG00000016910	C6orf118 (ENSCATG00000034818)	ENSCATG00000040268	PDE10A (ENSCATG00000039033)	ENSCATG00000035247	ENSCATG00000038207	TBXT (ENSCATG00000038841)	SFT2D1 (ENSCATG00000034006)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000016475.e.a #22
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B	ENSGT00940000156338	ENSGT00940000160747	ENSGT00390000016565	ENSGT00940000155361	ENSGT00390000015719.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT01090000260040.b.b.b.a	ENSGT00940000156585	ENSGT00390000013174	ENSGT00940000155194	ENSGT00940000159314	ENSGT00390000016475.e.a #22	ENSGT00950000182802.B.a.a.a.a.h.a.a.a.a	ENSGT00390000007879.a	ENSGT00940000153295.a.m.a	ENSGT00940000163172	ENSGT00940000157740.g	ENSGT00860000134004	ENSGT00520000055567.b	ENSGT00940000157260	ENSGT00620000087993.a.b	ENSGT00940000161879	ENSGT00940000159599	ENSGT01070000253847	ENSGT00390000004173	ENSGT00530000067301	ENSGT00950000183056.A.a
Bolivian squirrel monkey	MODERN SPECIES	110															RPS6KA1 (ENSSBOG00000033390)	ENSSBOG00000027717 #22	ENSSBOG00000019754	DHDDS (ENSSBOG00000021729)	ENSSBOG00000005545	ZNF683 (ENSSBOG00000031630)	CRYBG2 (ENSSBOG00000032216)	ENSSBOG00000026730	UBXN11 (ENSSBOG00000001035)	SH3BGRL3 (ENSSBOG00000034918)	CEP85 (ENSSBOG00000021910)	CATSPER4 (ENSSBOG00000032368)	CNKSR1 (ENSSBOG00000025367)	ZNF593OS (ENSSBOG00000022838)	ZNF593 (ENSSBOG00000030845)	C1orf232 (ENSSBOG00000028377)	FAM110D (ENSSBOG00000022708)
Capuchin	MODERN SPECIES	87	SLC9A1 (ENSCCAG00000026782)	TENT5B (ENSCCAG00000036493)	ENSCCAG00000028136	ENSCCAG00000020074	KDF1 (ENSCCAG00000015434)	NUDC (ENSCCAG00000033425)	NR0B2 (ENSCCAG00000030627)	GPATCH3 (ENSCCAG00000030482)	GPN2 (ENSCCAG00000027501)	SFN (ENSCCAG00000018889)	ZDHHC18 (ENSCCAG00000037044)	ENSCCAG00000033628	PIGV (ENSCCAG00000036607)	ARID1A (ENSCCAG00000035027)	RPS6KA1 (ENSCCAG00000036996)	ENSCCAG00000030722 #22	HMGN2 (ENSCCAG00000011522)	DHDDS (ENSCCAG00000018751)	LIN28A (ENSCCAG00000012963)	ZNF683 (ENSCCAG00000016907)	CRYBG2 (ENSCCAG00000036704)	CD52 (ENSCCAG00000036481)	UBXN11 (ENSCCAG00000027516)	SH3BGRL3 (ENSCCAG00000033774)	CEP85 (ENSCCAG00000017685)	CATSPER4 (ENSCCAG00000031230)	CNKSR1 (ENSCCAG00000020078)	ZNF593OS (ENSCCAG00000033003)	ZNF593 (ENSCCAG00000030595)	C1orf232 (ENSCCAG00000025437)	FAM110D (ENSCCAG00000018942)
Marmoset	MODERN SPECIES	5	ENSCJAG00000058582	ENSCJAG00000085014	CDC42EP3 (ENSCJAG00000003993)	QPCT (ENSCJAG00000039612)	PRKD3 (ENSCJAG00000003965)	NDUFAF7 (ENSCJAG00000003932)	CEBPZ (ENSCJAG00000003858)	CEBPZOS (ENSCJAG00000052176)	SULT6B1 (ENSCJAG00000003850)	EIF2AK2 (ENSCJAG00000003819)	GPATCH11 (ENSCJAG00000003790)	HEATR5B (ENSCJAG00000003707)	STRN (ENSCJAG00000003643)	ENSCJAG00000075406	VIT (ENSCJAG00000003620)	ENSCJAG00000083336 #22	FEZ2 (ENSCJAG00000003610)	CRIM1 (ENSCJAG00000003575)	ENSCJAG00000064354	ENSCJAG00000086725	FAM98A (ENSCJAG00000052058)	RASGRP3 (ENSCJAG00000003493)	LTBP1 (ENSCJAG00000003410)	ENSCJAG00000079030	TTC27 (ENSCJAG00000003388)	ENSCJAG00000076299	ENSCJAG00000005491	BIRC6 (ENSCJAG00000003301)	YIPF4 (ENSCJAG00000003292)	SLC30A6 (ENSCJAG00000003273)	SPAST (ENSCJAG00000003248)
Simiiformes	ANCESTRAL SPECIES	27	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.t.b	ENSGT00940000162695	ENSGT00940000164701	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.b ##31
Catarrhini	ANCESTRAL SPECIES	22	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000153430.a.b.q	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30
Cercopithecinae	ANCESTRAL SPECIES	21	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.d	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.b ##31
Vervet Monkey	DUPLICATION
Vervet Monkey	MODERN SPECIES	12	ALG6 (ENSCSAG00000001343)	FOXD3 (ENSCSAG00000000150)	ATG4C (ENSCSAG00000001342)	DOCK7 (ENSCSAG00000001341)	ANGPTL3 (ENSCSAG00000001340)	USP1 (ENSCSAG00000001339)	KANK4 (ENSCSAG00000001338)	L1TD1 (ENSCSAG00000001337)	PATJ (ENSCSAG00000001336)	TM2D1 (ENSCSAG00000001335)	ENSCSAG00000001334	ENSCSAG00000001333	C1orf87 (ENSCSAG00000001332)	CYP2J2 (ENSCSAG00000001331)	HOOK1 (ENSCSAG00000001330)	ENSCSAG00000001329 #22	FGGY (ENSCSAG00000001328)	ENSCSAG00000001327	JUN (ENSCSAG00000000149)	MYSM1 (ENSCSAG00000001326)	TACSTD2 (ENSCSAG00000001325)	OMA1 (ENSCSAG00000001324)	ENSCSAG00000000148	DAB1 (ENSCSAG00000001323)	C8B (ENSCSAG00000001322)	C8A (ENSCSAG00000001321)	FYB2 (ENSCSAG00000001320)	PRKAA2 (ENSCSAG00000001319)	PLPP3 (ENSCSAG00000001318)	ENSCSAG00000000147	USP24 (ENSCSAG00000001317)
Vervet Monkey	MODERN SPECIES	10	POLR2F (ENSCSAG00000006862) #7	SOX10 (ENSCSAG00000006842) #8	PICK1 (ENSCSAG00000006837) #9	SLC16A8 (ENSCSAG00000006828) #10	BAIAP2L2 (ENSCSAG00000006819) #11	PLA2G6 (ENSCSAG00000006793) #12	MAFF (ENSCSAG00000006757) #13	TMEM184B (ENSCSAG00000006716) #14	CSNK1E (ENSCSAG00000006688) #15	KCNJ4 (ENSCSAG00000019279) #16	KDELR3 (ENSCSAG00000006680) #17	DDX17 (ENSCSAG00000006649) #18	DMC1 (ENSCSAG00000006610) #19	FAM227A (ENSCSAG00000006575) #20	CBY1 (ENSCSAG00000006551) #21	TOMM22 (ENSCSAG00000006519) #22	JOSD1 (ENSCSAG00000006502) #23	GTPBP1 (ENSCSAG00000006496) #24	SUN2 (ENSCSAG00000006487) #25	DNAL4 (ENSCSAG00000006458) #26	NPTXR (ENSCSAG00000006453) #27	CBX6 (ENSCSAG00000006449) #28	ENSCSAG00000006445	APOBEC3C (ENSCSAG00000006402)	APOBEC3F (ENSCSAG00000006382)	APOBEC3G (ENSCSAG00000006376)	APOBEC3H (ENSCSAG00000006371)	CBX7 (ENSCSAG00000006361) #29	PDGFB (ENSCSAG00000006359) #30	SYNGR1 (ENSCSAG00000006356) #32	TAB1 (ENSCSAG00000006353) #33
Cercopithecinae_a	ANCESTRAL SPECIES	20	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00910000147211.a	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.d	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30
Cercopithecinae_b	ANCESTRAL SPECIES	22	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00910000147211.a	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.d	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30
Olive baboon	MODERN SPECIES	7	SOX10 (ENSPANG00000003891) #8	POLR2F (ENSPANG00000023979) #7	PICK1 (ENSPANG00000004812) #9	SLC16A8 (ENSPANG00000020815) #10	BAIAP2L2 (ENSPANG00000050215) #11	PLA2G6 (ENSPANG00000020907) #12	MAFF (ENSPANG00000020550) #13	TMEM184B (ENSPANG00000012334) #14	CSNK1E (ENSPANG00000018853) #15	KCNJ4 (ENSPANG00000010777) #16	KDELR3 (ENSPANG00000035955) #17	DDX17 (ENSPANG00000015143) #18	DMC1 (ENSPANG00000021763) #19	FAM227A (ENSPANG00000026317) #20	CBY1 (ENSPANG00000020416) #21	TOMM22 (ENSPANG00000039136) #22	JOSD1 (ENSPANG00000050059) #23	GTPBP1 (ENSPANG00000013808) #24	SUN2 (ENSPANG00000020414) #25	ENSPANG00000041247 #26	NPTXR (ENSPANG00000025006) #27	CBX6 (ENSPANG00000038194) #28	APOBEC3C (ENSPANG00000010775)	APOBEC3G (ENSPANG00000006941)	APOBEC3H (ENSPANG00000010774)	CBX7 (ENSPANG00000049315) #29	PDGFB (ENSPANG00000015141) #30	RPL3 (ENSPANG00000006976) ##31	SYNGR1 (ENSPANG00000030042) #32	TAB1 (ENSPANG00000023491) #33	MGAT3 (ENSPANG00000035060) #34
Cercopithecinae_d	ANCESTRAL SPECIES	17	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00910000147211.a	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.d	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30
Sooty mangabey	MODERN SPECIES	103							MAFF (ENSCATG00000027873) #13	TMEM184B (ENSCATG00000034314) #14	CSNK1E (ENSCATG00000016744) #15	KCNJ4 (ENSCATG00000018874) #16	KDELR3 (ENSCATG00000039752) #17	DDX17 (ENSCATG00000035701) #18	DMC1 (ENSCATG00000037008) #19	FAM227A (ENSCATG00000042291) #20	CBY1 (ENSCATG00000022660) #21	TOMM22 (ENSCATG00000041194) #22	JOSD1 (ENSCATG00000031097) #23	GTPBP1 (ENSCATG00000037701) #24	SUN2 (ENSCATG00000041848) #25	DNAL4 (ENSCATG00000035845) #26	NPTXR (ENSCATG00000040839) #27	CBX6 (ENSCATG00000035766) #28	APOBEC3C (ENSCATG00000043226)	ENSCATG00000028713	ENSCATG00000033502	ENSCATG00000013527	APOBEC3H (ENSCATG00000030302)	CBX7 (ENSCATG00000039873) #29	PDGFB (ENSCATG00000042932) #30	RPL3 (ENSCATG00000044047) ##31	SYNGR1 (ENSCATG00000012730) #32
Drill	DUPLICATION
Drill	MODERN SPECIES	419													NFIA (ENSMLEG00000042873)	C1orf87 (ENSMLEG00000040198)	CYP2J2 (ENSMLEG00000028848)	ENSMLEG00000007265 #22	HOOK1 (ENSMLEG00000039445)	ENSMLEG00000036765	FGGY (ENSMLEG00000028599)	MYSM1 (ENSMLEG00000042013)	TACSTD2 (ENSMLEG00000021805)	OMA1 (ENSMLEG00000039844)	DAB1 (ENSMLEG00000033725)	C8B (ENSMLEG00000032382)	C8A (ENSMLEG00000034403)	FYB2 (ENSMLEG00000035834)	PRKAA2 (ENSMLEG00000015881)	PLPP3 (ENSMLEG00000028691)	USP24 (ENSMLEG00000032923)	PCSK9 (ENSMLEG00000043695)	BSND (ENSMLEG00000036753)
Drill	MODERN SPECIES	751	SOX10 (ENSMLEG00000039023) #8	POLR2F (ENSMLEG00000033077) #7	PICK1 (ENSMLEG00000032205) #9	SLC16A8 (ENSMLEG00000041458) #10	BAIAP2L2 (ENSMLEG00000037824) #11	PLA2G6 (ENSMLEG00000041279) #12	MAFF (ENSMLEG00000032784) #13	TMEM184B (ENSMLEG00000039789) #14	CSNK1E (ENSMLEG00000037565) #15	KCNJ4 (ENSMLEG00000026932) #16	KDELR3 (ENSMLEG00000031427) #17	DDX17 (ENSMLEG00000029141) #18	DMC1 (ENSMLEG00000029700) #19	FAM227A (ENSMLEG00000031706) #20	CBY1 (ENSMLEG00000021451) #21	TOMM22 (ENSMLEG00000037973) #22	ENSMLEG00000035278	JOSD1 (ENSMLEG00000039536) #23	GTPBP1 (ENSMLEG00000031750) #24	SUN2 (ENSMLEG00000032997) #25	DNAL4 (ENSMLEG00000030084) #26	ENSMLEG00000023932	ENSMLEG00000008447 #27	ENSMLEG00000041526	ENSMLEG00000004809	APOBEC3C (ENSMLEG00000036992)	APOBEC3F (ENSMLEG00000029642)	APOBEC3G (ENSMLEG00000024444)	APOBEC3H (ENSMLEG00000033417)	CBX7 (ENSMLEG00000040573) #29	PDGFB (ENSMLEG00000039646) #30
Macaca	ANCESTRAL SPECIES	20	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00910000147211.a	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.d	ENSGT00940000162695.f	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.b ##31
Macaca_a	ANCESTRAL SPECIES	20	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.b.a.b.b.a.a	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.b.a.b	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00910000147211.a	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.c.a	ENSGT00940000162695.f	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.b ##31	ENSGT00950000182935.B.b.c #32	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.b.a.a.b.a.a
Rhesus	MODERN SPECIES	1	SOX10 (ENSMMUG00000052236) #8	POLR2F (ENSMMUG00000006987) #7	PICK1 (ENSMMUG00000002697) #9	SLC16A8 (ENSMMUG00000055240) #10	BAIAP2L2 (ENSMMUG00000002699) #11	MAFF (ENSMMUG00000045506) #13	PLA2G6 (ENSMMUG00000002701) #12	ENSMMUG00000058776	CSNK1E (ENSMMUG00000010122) #15	KCNJ4 (ENSMMUG00000040628) #16	KDELR3 (ENSMMUG00000004303) #17	DDX17 (ENSMMUG00000004304) #18	ENSMMUG00000061118	FAM227A (ENSMMUG00000012467) #20	CBY1 (ENSMMUG00000017680) #21	TOMM22 (ENSMMUG00000000364) #22	JOSD1 (ENSMMUG00000021083) #23	GTPBP1 (ENSMMUG00000007277) #24	SUN2 (ENSMMUG00000007284) #25	DNAL4 (ENSMMUG00000004868) #26	NPTXR (ENSMMUG00000004869) #27	CBX6 (ENSMMUG00000048395) #28	APOBEC3A (ENSMMUG00000042504)	APOBEC3B (ENSMMUG00000004015)	ENSMMUG00000004017	APOBEC3G (ENSMMUG00000039346)	APOBEC3H (ENSMMUG00000001016)	ENSMMUG00000059320	CBX7 (ENSMMUG00000007845) #29	PDGFB (ENSMMUG00000002739) #30	RPL3 (ENSMMUG00000010029) ##31
Crab-eating macaque	MODERN SPECIES	1	SOX10 (ENSMFAG00000030971) #8	POLR2F (ENSMFAG00000033687) #7	PICK1 (ENSMFAG00000003832) #9	SLC16A8 (ENSMFAG00000059787) #10	ENSMFAG00000056144 #11	MAFF (ENSMFAG00000000319) #13	PLA2G6 (ENSMFAG00000046328) #12	ENSMFAG00000051239	CSNK1E (ENSMFAG00000003325) #15	KDELR3 (ENSMFAG00000042286) #17	DDX17 (ENSMFAG00000046051) #18	DMC1 (ENSMFAG00000045466) #19	ENSMFAG00000059738	FAM227A (ENSMFAG00000000358) #20	ENSMFAG00000041976 #21	TOMM22 (ENSMFAG00000044855) #22	ENSMFAG00000050968	JOSD1 (ENSMFAG00000038103) #23	ENSMFAG00000060377	GTPBP1 (ENSMFAG00000037252) #24	SUN2 (ENSMFAG00000021939) #25	ENSMFAG00000051185 #26	NPTXR (ENSMFAG00000000252) #27	ENSMFAG00000062247 #28	ENSMFAG00000057689	ENSMFAG00000048585	APOBEC3H (ENSMFAG00000031827)	CBX7 (ENSMFAG00000034255) #29	ENSMFAG00000064646	PDGFB (ENSMFAG00000031697) #30	ENSMFAG00000048170
Pig-tailed macaque	MODERN SPECIES	329	SOX10 (ENSMNEG00000040058) #8	POLR2F (ENSMNEG00000044365) #7	PICK1 (ENSMNEG00000042469) #9	SLC16A8 (ENSMNEG00000043948) #10	BAIAP2L2 (ENSMNEG00000040331) #11	PLA2G6 (ENSMNEG00000036111) #12	MAFF (ENSMNEG00000044039) #13	TMEM184B (ENSMNEG00000013220) #14	CSNK1E (ENSMNEG00000028250) #15	KCNJ4 (ENSMNEG00000001095) #16	KDELR3 (ENSMNEG00000030497) #17	DDX17 (ENSMNEG00000022218) #18	DMC1 (ENSMNEG00000031051) #19	FAM227A (ENSMNEG00000037270) #20	CBY1 (ENSMNEG00000025697) #21	TOMM22 (ENSMNEG00000031409) #22	ENSMNEG00000041860	JOSD1 (ENSMNEG00000000474) #23	GTPBP1 (ENSMNEG00000035572) #24	SUN2 (ENSMNEG00000016085) #25	DNAL4 (ENSMNEG00000035772) #26	ENSMNEG00000001210	NPTXR (ENSMNEG00000029685) #27	CBX6 (ENSMNEG00000033013) #28	ENSMNEG00000043211	APOBEC3C (ENSMNEG00000045196)	APOBEC3D (ENSMNEG00000043316)	APOBEC3G (ENSMNEG00000038847)	APOBEC3H (ENSMNEG00000039259)	CBX7 (ENSMNEG00000044086) #29	PDGFB (ENSMNEG00000038207) #30
Rhinopithecus	ANCESTRAL SPECIES	3	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00910000147211	ENSGT00940000156054 #24	ENSGT00940000153430.a.b.q	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701	ENSGT00940000162695.f	ENSGT00940000162695.e.b	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1245																ENSRROG00000039244 #22	HOOK1 (ENSRROG00000000041)	ENSRROG00000010335	FGGY (ENSRROG00000028725)	ENSRROG00000019104	MYSM1 (ENSRROG00000032239)	TACSTD2 (ENSRROG00000019234)	OMA1 (ENSRROG00000031328)	DAB1 (ENSRROG00000036124)	C8B (ENSRROG00000040138)	C8A (ENSRROG00000030584)	FYB2 (ENSRROG00000033985)	PRKAA2 (ENSRROG00000040261)	PLPP3 (ENSRROG00000043132)	ENSRROG00000042178
Golden snub-nosed monkey	MODERN SPECIES	2721	PICK1 (ENSRROG00000040502) #9	SLC16A8 (ENSRROG00000041810) #10	BAIAP2L2 (ENSRROG00000037459) #11	PLA2G6 (ENSRROG00000035148) #12	ENSRROG00000019366	MAFF (ENSRROG00000042813) #13	TMEM184B (ENSRROG00000040391) #14	CSNK1E (ENSRROG00000040037) #15	KCNJ4 (ENSRROG00000008366) #16	KDELR3 (ENSRROG00000030931) #17	DDX17 (ENSRROG00000045378) #18	ENSRROG00000037265	DMC1 (ENSRROG00000043002) #19	FAM227A (ENSRROG00000044925) #20	CBY1 (ENSRROG00000040566) #21	TOMM22 (ENSRROG00000042007) #22	JOSD1 (ENSRROG00000031876) #23	ENSRROG00000042829	GTPBP1 (ENSRROG00000044733) #24	ENSRROG00000033588	SUN2 (ENSRROG00000038392) #25	DNAL4 (ENSRROG00000035941) #26	NPTXR (ENSRROG00000038554) #27	CBX6 (ENSRROG00000040472) #28	APOBEC3G (ENSRROG00000028773)	ENSRROG00000028557	APOBEC3C (ENSRROG00000029045)	APOBEC3H (ENSRROG00000024699)	CBX7 (ENSRROG00000033680) #29	PDGFB (ENSRROG00000007216) #30	ENSRROG00000044143 ##31
Hominoidea	ANCESTRAL SPECIES	22	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29
Gibbon	MODERN SPECIES	22	ENSNLEG00000029804 #8	ENSNLEG00000014987 #7	PICK1 (ENSNLEG00000014995) #9	SLC16A8 (ENSNLEG00000015018) #10	BAIAP2L2 (ENSNLEG00000015019) #11	PLA2G6 (ENSNLEG00000015026) #12	MAFF (ENSNLEG00000015068) #13	TMEM184B (ENSNLEG00000015069) #14	CSNK1E (ENSNLEG00000015080) #15	ENSNLEG00000028576 #17	ENSNLEG00000032402	DDX17 (ENSNLEG00000015117) #18	DMC1 (ENSNLEG00000015133) #19	FAM227A (ENSNLEG00000015147) #20	ENSNLEG00000015153 #21	TOMM22 (ENSNLEG00000015159) #22	JOSD1 (ENSNLEG00000030934) #23	GTPBP1 (ENSNLEG00000015164) #24	ENSNLEG00000015170	SUN2 (ENSNLEG00000015173) #25	DNAL4 (ENSNLEG00000015207) #26	ENSNLEG00000032049	ENSNLEG00000015211 #27	CBX6 (ENSNLEG00000015212) #28	ENSNLEG00000015215	APOBEC3C (ENSNLEG00000028392)	ENSNLEG00000035811	ENSNLEG00000015218	CBX7 (ENSNLEG00000032032) #29	PDGFB (ENSNLEG00000015229) #30	ENSNLEG00000015234 ##31
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29
Orangutan	MODERN SPECIES	13	POLR2F (ENSPPYG00000011809) #7	SOX10 (ENSPPYG00000036542) #8	PICK1 (ENSPPYG00000011812) #9	SLC16A8 (ENSPPYG00000011813) #10	BAIAP2L2 (ENSPPYG00000011814) #11	PLA2G6 (ENSPPYG00000011815) #12	MAFF (ENSPPYG00000011816) #13	TMEM184B (ENSPPYG00000011817) #14	ENSPPYG00000011818 #15	KCNJ4 (ENSPPYG00000011819) #16	KDELR3 (ENSPPYG00000011820) #17	DDX17 (ENSPPYG00000011821) #18	DMC1 (ENSPPYG00000011822) #19	FAM227A (ENSPPYG00000039835) #20	ENSPPYG00000038910 #21	TOMM22 (ENSPPYG00000034972) #22	JOSD1 (ENSPPYG00000011826) #23	GTPBP1 (ENSPPYG00000011827) #24	SUN2 (ENSPPYG00000011828) #25	ENSPPYG00000011829	NPTXR (ENSPPYG00000011830) #27	CBX6 (ENSPPYG00000040962) #28	ENSPPYG00000011831	APOBEC3C (ENSPPYG00000011832)	APOBEC3F (ENSPPYG00000040673)	APOBEC3G (ENSPPYG00000011833)	ENSPPYG00000011834	ENSPPYG00000039250	ENSPPYG00000038245	ENSPPYG00000011835 #29	PDGFB (ENSPPYG00000011836) #30
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.a	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30
Gorilla	MODERN SPECIES	13	MICALL1 (ENSGGOG00000008348)	C22orf23 (ENSGGOG00000024080)	ENSGGOG00000005213 #7	ENSGGOG00000022288 #8	PLA2G6 (ENSGGOG00000017087) #12	MAFF (ENSGGOG00000021932) #13	TMEM184B (ENSGGOG00000007040) #14	CSNK1E (ENSGGOG00000016208) #15	KCNJ4 (ENSGGOG00000000554) #16	KDELR3 (ENSGGOG00000008303) #17	DDX17 (ENSGGOG00000008309) #18	ENSGGOG00000038849	DMC1 (ENSGGOG00000011215) #19	ENSGGOG00000010896 #20	ENSGGOG00000013226 #21	TOMM22 (ENSGGOG00000013230) #22	JOSD1 (ENSGGOG00000002091) #23	DNAL4 (ENSGGOG00000013527) #26	NPTXR (ENSGGOG00000004660) #27	CBX6 (ENSGGOG00000043581) #28	APOBEC3B (ENSGGOG00000006721)	ENSGGOG00000036587	APOBEC3F (ENSGGOG00000038678)	APOBEC3G (ENSGGOG00000013750)	CBX7 (ENSGGOG00000004873) #29	PDGFB (ENSGGOG00000015535) #30	ENSGGOG00000002326 ##31	TAB1 (ENSGGOG00000008015) #33	ENSGGOG00000042683	MGAT3 (ENSGGOG00000010107) #34	MIEF1 (ENSGGOG00000010109) #35
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000153430.a.b.q	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.a	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29
Human	MODERN SPECIES	14	SOX10 (ENSG00000100146) #8	PICK1 (ENSG00000100151) #9	SLC16A8 (ENSG00000100156) #10	BAIAP2L2 (ENSG00000128298) #11	PLA2G6 (ENSG00000184381) #12	MAFF (ENSG00000185022) #13	TMEM184B (ENSG00000198792) #14	CSNK1E (ENSG00000213923) #15	TPTEP2-CSNK1E (ENSG00000283900)	KCNJ4 (ENSG00000168135) #16	KDELR3 (ENSG00000100196) #17	DDX17 (ENSG00000100201) #18	DMC1 (ENSG00000100206) #19	FAM227A (ENSG00000184949) #20	CBY1 (ENSG00000100211) #21	TOMM22 (ENSG00000100216) #22	JOSD1 (ENSG00000100221) #23	GTPBP1 (ENSG00000100226) #24	SUN2 (ENSG00000100242) #25	DNAL4 (ENSG00000100246) #26	NPTXR (ENSG00000221890) #27	CBX6 (ENSG00000183741) #28	APOBEC3A (ENSG00000128383)	APOBEC3B (ENSG00000179750)	APOBEC3C (ENSG00000244509)	ENSG00000284554	APOBEC3D (ENSG00000243811)	APOBEC3F (ENSG00000128394)	APOBEC3G (ENSG00000239713)	APOBEC3H (ENSG00000100298)	CBX7 (ENSG00000100307) #29
Pan	ANCESTRAL SPECIES	23	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a.g #21	ENSGT00390000016475.e.b #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000153430.a.b.q	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00910000147154	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000164701.a	ENSGT00940000162695.f	ENSGT00940000162695.e	ENSGT00940000161999.t.a	ENSGT00940000162772	ENSGT00940000158365 #29
Bonobo	MODERN SPECIES	13	SOX10 (ENSPPAG00000028389) #8	PICK1 (ENSPPAG00000029328) #9	SLC16A8 (ENSPPAG00000031437) #10	BAIAP2L2 (ENSPPAG00000033483) #11	PLA2G6 (ENSPPAG00000028438) #12	ENSPPAG00000027986 #13	TMEM184B (ENSPPAG00000025777) #14	CSNK1E (ENSPPAG00000034621) #15	KCNJ4 (ENSPPAG00000021519) #16	KDELR3 (ENSPPAG00000029491) #17	DDX17 (ENSPPAG00000042301) #18	ENSPPAG00000005436	DMC1 (ENSPPAG00000039727) #19	FAM227A (ENSPPAG00000025902) #20	ENSPPAG00000031485 #21	TOMM22 (ENSPPAG00000033147) #22	JOSD1 (ENSPPAG00000011451) #23	GTPBP1 (ENSPPAG00000024682) #24	ENSPPAG00000035397	ENSPPAG00000037574	SUN2 (ENSPPAG00000038642) #25	DNAL4 (ENSPPAG00000031504) #26	ENSPPAG00000035771	ENSPPAG00000036694 #27	CBX6 (ENSPPAG00000037312) #28	APOBEC3B (ENSPPAG00000009288)	APOBEC3C (ENSPPAG00000014118)	ENSPPAG00000028218	ENSPPAG00000031519	ENSPPAG00000033277	APOBEC3H (ENSPPAG00000036522)
Chimpanzee	MODERN SPECIES	13	SOX10 (ENSPTRG00000014357) #8	PICK1 (ENSPTRG00000014359) #9	SLC16A8 (ENSPTRG00000014360) #10	BAIAP2L2 (ENSPTRG00000014361) #11	PLA2G6 (ENSPTRG00000014362) #12	MAFF (ENSPTRG00000029431) #13	TMEM184B (ENSPTRG00000022822) #14	CSNK1E (ENSPTRG00000014365) #15	KCNJ4 (ENSPTRG00000050908) #16	KDELR3 (ENSPTRG00000014367) #17	DDX17 (ENSPTRG00000014369) #18	ENSPTRG00000051975	DMC1 (ENSPTRG00000014370) #19	FAM227A (ENSPTRG00000014372) #20	CBY1 (ENSPTRG00000014373) #21	TOMM22 (ENSPTRG00000014374) #22	JOSD1 (ENSPTRG00000014375) #23	GTPBP1 (ENSPTRG00000014376) #24	ENSPTRG00000043000	SUN2 (ENSPTRG00000023985) #25	DNAL4 (ENSPTRG00000014379) #26	NPTXR (ENSPTRG00000014380) #27	ENSPTRG00000048123	CBX6 (ENSPTRG00000051110) #28	APOBEC3B (ENSPTRG00000014384)	ENSPTRG00000014382	APOBEC3D (ENSPTRG00000041588)	APOBEC3C (ENSPTRG00000014385)	APOBEC3G (ENSPTRG00000014387)	APOBEC3H (ENSPTRG00000014390)	CBX7 (ENSPTRG00000014391) #29
Simiiformes	ANCESTRAL SPECIES																	ENSGT00390000016475.f #22
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000016475.f #22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00390000016475.f #22
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00390000016475.f #22
Black snub-nosed monkey	MODERN SPECIES	3143																TOMM22 (ENSRBIG00000033352) #22
Platyrrhini	ANCESTRAL SPECIES	30	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.f #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00910000148162	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.t.b	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##31	ENSGT00390000017606.a.a.i.a.b.b ##31	ENSGT00950000182935.B.b.c #32
Cebidae	ANCESTRAL SPECIES	31	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.f #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.t.b	ENSGT00940000162695	ENSGT00940000164701	ENSGT00940000161999.t.a.a.a	ENSGT00940000161999.t.a.b	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##31
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES		SOX10 (ENSCJAG00000062620) #8	PICK1 (ENSCJAG00000012142) #9	SLC16A8 (ENSCJAG00000012113) #10	BAIAP2L2 (ENSCJAG00000012023) #11	PLA2G6 (ENSCJAG00000011999) #12	MAFF (ENSCJAG00000053088) #13	TMEM184B (ENSCJAG00000011962) #14	ENSCJAG00000083143	CSNK1E (ENSCJAG00000011879) #15	KCNJ4 (ENSCJAG00000011954) #16	KDELR3 (ENSCJAG00000011872) #17	DDX17 (ENSCJAG00000011797) #18	DMC1 (ENSCJAG00000011766) #19	FAM227A (ENSCJAG00000011747) #20	CBY1 (ENSCJAG00000011737) #21	ENSCJAG00000011731 #22	JOSD1 (ENSCJAG00000011713) #23	GTPBP1 (ENSCJAG00000011652) #24	SUN2 (ENSCJAG00000011606) #25	ENSCJAG00000081474	DNAL4 (ENSCJAG00000044212) #26	ENSCJAG00000022758	NPTXR (ENSCJAG00000041862) #27	CBX6 (ENSCJAG00000056228) #28	APOBEC3A (ENSCJAG00000011578)	ENSCJAG00000073371	ENSCJAG00000012500	ENSCJAG00000080759	ENSCJAG00000085098	APOBEC3H (ENSCJAG00000012524)	CBX7 (ENSCJAG00000012537) #29
Marmoset	MODERN SPECIES		TTC38 (ENSCJAG00000076461)	PKDREJ (ENSCJAG00000040524)	CDPF1 (ENSCJAG00000000179)	PPARA (ENSCJAG00000000176)	WNT7B (ENSCJAG00000082663)	ATXN10 (ENSCJAG00000012879)	FBLN1 (ENSCJAG00000012893)	RIBC2 (ENSCJAG00000022546)	SMC1B (ENSCJAG00000000550)	FAM118A (ENSCJAG00000000548)	UPK3A (ENSCJAG00000000546)	ENSCJAG00000042242	PRR5 (ENSCJAG00000056936)	ARHGAP8 (ENSCJAG00000016200)	PHF21B (ENSCJAG00000016227)	ENSCJAG00000080411 #22	ENSCJAG00000016242	KIAA0930 (ENSCJAG00000016255)	CERK (ENSCJAG00000002195)	TBC1D22A (ENSCJAG00000002185)	ENSCJAG00000070586	TAFA5 (ENSCJAG00000048177)	ENSCJAG00000058146	BRD1 (ENSCJAG00000016639)	ZBED4 (ENSCJAG00000083912)	ALG12 (ENSCJAG00000016677)	CRELD2 (ENSCJAG00000016693)	PIM3 (ENSCJAG00000044399)	MOV10L1 (ENSCJAG00000003399)	ENSCJAG00000073587	PANX2 (ENSCJAG00000003392)
Cebidae_a	ANCESTRAL SPECIES	40	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00910000147308	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.f #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000161999.t.b	ENSGT00940000162695	ENSGT00940000161999.t.a.a.a	ENSGT00940000161999.t.a.b	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##31	ENSGT00950000182935.B.b.c #32
Bolivian squirrel monkey	MODERN SPECIES	94	POLR2F (ENSSBOG00000023340) #7	PICK1 (ENSSBOG00000021166) #9	SLC16A8 (ENSSBOG00000035926) #10	BAIAP2L2 (ENSSBOG00000021477) #11	PLA2G6 (ENSSBOG00000033885) #12	MAFF (ENSSBOG00000030504) #13	TMEM184B (ENSSBOG00000030392) #14	CSNK1E (ENSSBOG00000032453) #15	KCNJ4 (ENSSBOG00000006090) #16	KDELR3 (ENSSBOG00000020752) #17	ENSSBOG00000022103	DDX17 (ENSSBOG00000024547) #18	DMC1 (ENSSBOG00000026795) #19	FAM227A (ENSSBOG00000024182) #20	CBY1 (ENSSBOG00000027537) #21	ENSSBOG00000028449 #22	JOSD1 (ENSSBOG00000023165) #23	ENSSBOG00000020433	GTPBP1 (ENSSBOG00000029683) #24	SUN2 (ENSSBOG00000026240) #25	DNAL4 (ENSSBOG00000036141) #26	NPTXR (ENSSBOG00000035192) #27	CBX6 (ENSSBOG00000032596) #28	ENSSBOG00000033710	ENSSBOG00000029091	ENSSBOG00000032780	ENSSBOG00000021384	ENSSBOG00000023468	ENSSBOG00000018208	APOBEC3H (ENSSBOG00000030005)	CBX7 (ENSSBOG00000026317) #29
Capuchin	MODERN SPECIES	404	SOX10 (ENSCCAG00000034860) #8	PICK1 (ENSCCAG00000017986) #9	SLC16A8 (ENSCCAG00000037967) #10	BAIAP2L2 (ENSCCAG00000024984) #11	PLA2G6 (ENSCCAG00000034617) #12	MAFF (ENSCCAG00000030181) #13	TMEM184B (ENSCCAG00000032854) #14	CSNK1E (ENSCCAG00000034371) #15	KCNJ4 (ENSCCAG00000002994) #16	KDELR3 (ENSCCAG00000015594) #17	DDX17 (ENSCCAG00000024116) #18	ENSCCAG00000026398	ENSCCAG00000022215 #19	FAM227A (ENSCCAG00000018563) #20	CBY1 (ENSCCAG00000023785) #21	ENSCCAG00000036100 #22	JOSD1 (ENSCCAG00000003460) #23	GTPBP1 (ENSCCAG00000033843) #24	SUN2 (ENSCCAG00000029920) #25	DNAL4 (ENSCCAG00000025723) #26	NPTXR (ENSCCAG00000027126) #27	CBX6 (ENSCCAG00000022523) #28	ENSCCAG00000030928	ENSCCAG00000030932	ENSCCAG00000027450
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	542															ENSANAG00000023291	ENSANAG00000024564 #22	ENSANAG00000031180	ENSANAG00000029048	TRIM39 (ENSANAG00000032075)	TRIM26 (ENSANAG00000024511)	TRIM15 (ENSANAG00000032155)	TRIM10 (ENSANAG00000035776)	TRIM40 (ENSANAG00000024067)
Mas night monkey	MODERN SPECIES	1299	SOX10 (ENSANAG00000035473) #8	POLR2F (ENSANAG00000020840) #7	PICK1 (ENSANAG00000037380) #9	SLC16A8 (ENSANAG00000031043) #10	BAIAP2L2 (ENSANAG00000033051) #11	PLA2G6 (ENSANAG00000037958) #12	MAFF (ENSANAG00000020671) #13	TMEM184B (ENSANAG00000034651) #14	CSNK1E (ENSANAG00000034360) #15	KCNJ4 (ENSANAG00000015534) #16	KDELR3 (ENSANAG00000024533) #17	DDX17 (ENSANAG00000035052) #18	DMC1 (ENSANAG00000032238) #19	FAM227A (ENSANAG00000030228) #20	CBY1 (ENSANAG00000023770) #21	ENSANAG00000033691 #22	JOSD1 (ENSANAG00000032776) #23	ENSANAG00000032528	GTPBP1 (ENSANAG00000037524) #24	SUN2 (ENSANAG00000024376) #25	DNAL4 (ENSANAG00000027462) #26	NPTXR (ENSANAG00000023380) #27	CBX6 (ENSANAG00000028570) #28	ENSANAG00000030088	ENSANAG00000020573	APOBEC3H (ENSANAG00000025410)	CBX7 (ENSANAG00000029398) #29	PDGFB (ENSANAG00000036199) #30	ENSANAG00000031094 ##31	SYNGR1 (ENSANAG00000033277) #32	TAB1 (ENSANAG00000031987) #33
Euarchontoglires_A	DUPLICATION
Euarchontoglires_A	DUPLICATION
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00390000016475.g.a #22
Glires	ANCESTRAL SPECIES																	ENSGT00390000016475.g.a #22
Rodentia	ANCESTRAL SPECIES																	ENSGT00390000016475.g.a #22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00390000016475.g.a #22
Sciuridae	ANCESTRAL SPECIES																	ENSGT00390000016475.g.a #22
Eurasian red squirrel	MODERN SPECIES	14	POLR2F (ENSSVLG00005012579) #7	SOX10 (ENSSVLG00005012703) #8	PICK1 (ENSSVLG00005012766) #9	SLC16A8 (ENSSVLG00005012818) #10	BAIAP2L2 (ENSSVLG00005012886) #11	PLA2G6 (ENSSVLG00005013158) #12	MAFF (ENSSVLG00005013238) #13	TMEM184B (ENSSVLG00005013270) #14	ENSSVLG00005013745 #15	KCNJ4 (ENSSVLG00005014012) #16	KDELR3 (ENSSVLG00005014043) #17	DDX17 (ENSSVLG00005014127) #18	DMC1 (ENSSVLG00005014240) #19	FAM227A (ENSSVLG00005014554) #20	ENSSVLG00005014587 #21	ENSSVLG00005014630 #22	JOSD1 (ENSSVLG00005014656) #23	GTPBP1 (ENSSVLG00005014719) #24	SUN2 (ENSSVLG00005014778) #25	DNAL4 (ENSSVLG00005014974) #26	NPTXR (ENSSVLG00005015045) #27	CBX6 (ENSSVLG00005015114) #28	ENSSVLG00005015177	ENSSVLG00005015640 #29	ENSSVLG00005015660 #29	CBX7 (ENSSVLG00005015711) #29	PDGFB (ENSSVLG00005015796) #30	RPL3 (ENSSVLG00005015871) #31	SYNGR1 (ENSSVLG00005016019) #32	TAB1 (ENSSVLG00005016109) #33	MGAT3 (ENSSVLG00005016225) #34
Tree shrew	MODERN SPECIES	5927												DMC1 (ENSTBEG00000015067) #19	ENSTBEG00000015211	ENSTBEG00000015231 #20	CBY1 (ENSTBEG00000015542) #21	TOMM22 (ENSTBEG00000015683) #22	JOSD1 (ENSTBEG00000015749) #23	ENSTBEG00000015831 #24	ENSTBEG00000016440 #25	ENSTBEG00000016561 #27
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Glires	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Rodentia	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Hystricomorpha_a	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Long-tailed chinchilla	MODERN SPECIES	159	E2F2 (ENSCLAG00000013943)	ASAP3 (ENSCLAG00000009066)	ENSCLAG00000013324	ENSCLAG00000013386	HNRNPR (ENSCLAG00000012738)	ENSCLAG00000012687	LUZP1 (ENSCLAG00000008774)	KDM1A (ENSCLAG00000007181)	TEX46 (ENSCLAG00000014987)	LACTBL1 (ENSCLAG00000009588)	EPHB2 (ENSCLAG00000011252)	C1QB (ENSCLAG00000011016)	C1QC (ENSCLAG00000009600)	C1QA (ENSCLAG00000009255)	EPHA8 (ENSCLAG00000014518)	ENSCLAG00000011831 #22	ZBTB40 (ENSCLAG00000015032)	WNT4 (ENSCLAG00000010626)	CDC42 (ENSCLAG00000011266)	ENSCLAG00000009263	ENSCLAG00000009037	ENSCLAG00000008501	HSPG2 (ENSCLAG00000009491)	ENSCLAG00000008631	USP48 (ENSCLAG00000007619)	RAP1GAP (ENSCLAG00000011156)	ALPL (ENSCLAG00000007567)	ECE1 (ENSCLAG00000012254)	EIF4G3 (ENSCLAG00000016985)	HP1BP3 (ENSCLAG00000016763)	SH2D5 (ENSCLAG00000013408)
Sciuridae	ANCESTRAL SPECIES																	ENSGT00390000016475.g.b #22
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	7	PLCL2 (ENSSVLG00005008741)	TBC1D5 (ENSSVLG00005008563)	SATB1 (ENSSVLG00005024270)	KCNH8 (ENSSVLG00005024188)	ENSSVLG00005024173	ENSSVLG00005024162	EFHB (ENSSVLG00005024067)	RAB5A (ENSSVLG00005024015)	PP2D1 (ENSSVLG00005023998)	ENSSVLG00005023944	ENSSVLG00005023908	ENSSVLG00005023889	ENSSVLG00005023862	ENSSVLG00005023824	ZNF385D (ENSSVLG00005023781)	TOMM22 (ENSSVLG00005023755) #22	ENSSVLG00005023738	ENSSVLG00005023698	ENSSVLG00005023675	ENSSVLG00005023653	UBE2E2 (ENSSVLG00005023634)	ENSSVLG00005023602	ENSSVLG00005023574	ENSSVLG00005023550	UBE2E1 (ENSSVLG00005023468)	NKIRAS1 (ENSSVLG00005023434)	RPL15 (ENSSVLG00005023393)	ENSSVLG00005023338	THRB (ENSSVLG00005023254)	RARB (ENSSVLG00005023141)	TOP2B (ENSSVLG00005022880)
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005009507	RSPH4A (ENSSVLG00005009389)	ZUP1 (ENSSVLG00005009321)	KPNA5 (ENSSVLG00005009288)	FAM162B (ENSSVLG00005009241)	GPRC6A (ENSSVLG00005009132)	RFX6 (ENSSVLG00005008988)	VGLL2 (ENSSVLG00005008910)	ROS1 (ENSSVLG00005008411)	GOPC (ENSSVLG00005008267)	ENSSVLG00005008200	ENSSVLG00005008163	SLC35F1 (ENSSVLG00005008070)	ENSSVLG00005008035	PLN (ENSSVLG00005008023)	ENSSVLG00005008007 #22	CEP85L (ENSSVLG00005007817)	ENSSVLG00005007753	ASF1A (ENSSVLG00005007714)	MCM9 (ENSSVLG00005007606)	FAM184A (ENSSVLG00005007328)	MAN1A1 (ENSSVLG00005007126)	ENSSVLG00005007082	TBC1D32 (ENSSVLG00005006779)	GJA1 (ENSSVLG00005006680)	ENSSVLG00005006646	HSF2 (ENSSVLG00005006581)	ENSSVLG00005021700	PKIB (ENSSVLG00005021666)	FABP7 (ENSSVLG00005021624)	SMPDL3A (ENSSVLG00005021570)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887	ENSGT00390000013127.a #35
Glires	ANCESTRAL SPECIES	4	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Lagomorpha	ANCESTRAL SPECIES	130				ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000161999	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.i.a.a.b ##31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000013127.a #35	ENSGT00530000063801.a #36	ENSGT00390000016774 #37
Pika	MODERN SPECIES	10015																TOMM22 (ENSOPRG00000005099) #22	ENSOPRG00000005092 #23
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887	ENSGT00390000013127.a #35
Kangaroo rat	MODERN SPECIES	398	Micall1 (ENSDORG00000009480)	ENSDORG00000023340	Polr2f (ENSDORG00000024789) #7	Sox10 (ENSDORG00000026081) #8	Pick1 (ENSDORG00000002791) #9	Slc16a8 (ENSDORG00000002585) #10	ENSDORG00000002587 #11	Pla2g6 (ENSDORG00000002589) #12	Maff (ENSDORG00000013449) #13	Tmem184b (ENSDORG00000029807) #14	Csnk1e (ENSDORG00000009978) #15	Kcnj4 (ENSDORG00000007221) #16	Kdelr3 (ENSDORG00000005281) #17	Ddx17 (ENSDORG00000003358) #18	Dmc1 (ENSDORG00000015717) #19	Tomm22 (ENSDORG00000015791) #22	Josd1 (ENSDORG00000025284) #23	Gtpbp1 (ENSDORG00000015795) #24	Sun2 (ENSDORG00000015797) #25	ENSDORG00000029143 #26	ENSDORG00000029752 #27	ENSDORG00000030017 #27	ENSDORG00000027271	Cbx7 (ENSDORG00000010065) #29	Pdgfb (ENSDORG00000010253) #30	Rpl3 (ENSDORG00000012849) #31	Syngr1 (ENSDORG00000001564) #32	Tab1 (ENSDORG00000012343) #33	Mief1 (ENSDORG00000023252) #35	Atf4 (ENSDORG00000004952) #36	Rps19bp1 (ENSDORG00000026673) #37
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887	ENSGT00390000013127.a #35
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887	ENSGT00390000013127.a #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1577	Polr2f (ENSNGAG00000020682) #7	Sox10 (ENSNGAG00000016234) #8	Pick1 (ENSNGAG00000004238) #9	Slc16a8 (ENSNGAG00000020342) #10	Baiap2l2 (ENSNGAG00000018064) #11	Pla2g6 (ENSNGAG00000009639) #12	Maff (ENSNGAG00000005792) #13	Tmem184b (ENSNGAG00000012726) #14	Csnk1e (ENSNGAG00000019350) #15	Kcnj4 (ENSNGAG00000011248) #16	Kdelr3 (ENSNGAG00000011665) #17	Ddx17 (ENSNGAG00000004001) #18	Dmc1 (ENSNGAG00000018320) #19	ENSNGAG00000017016	Cby1 (ENSNGAG00000014472) #21	Tomm22 (ENSNGAG00000001315) #22	Josd1 (ENSNGAG00000015006) #23	Gtpbp1 (ENSNGAG00000010065) #24	Sun2 (ENSNGAG00000012091) #25	ENSNGAG00000006712 #26	Nptxr (ENSNGAG00000021020) #27	Apobec3 (ENSNGAG00000018998)	Cbx7 (ENSNGAG00000017652) #29	Pdgfb (ENSNGAG00000018908) #30	Rpl3 (ENSNGAG00000011936) #31	Syngr1 (ENSNGAG00000005324) #32	Tab1 (ENSNGAG00000013198) #33	Mgat3 (ENSNGAG00000018263) #34	ENSNGAG00000013450 #35	Atf4 (ENSNGAG00000007824) #36	Rps19bp1 (ENSNGAG00000017027) #37
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887	ENSGT00390000013127.a #35
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT00530000063801.a #36
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT01030000235747	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT00530000063801.a #36
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	626	Polr2f (ENSMAUG00000018586) #7	Sox10 (ENSMAUG00000012559) #8	Pick1 (ENSMAUG00000020814) #9	Slc16a8 (ENSMAUG00000020465) #10	Baiap2l2 (ENSMAUG00000018411) #11	Pla2g6 (ENSMAUG00000021718) #12	Maff (ENSMAUG00000008846) #13	Tmem184b (ENSMAUG00000013044) #14	Csnk1e (ENSMAUG00000003914) #15	Kcnj4 (ENSMAUG00000020839) #16	Kdelr3 (ENSMAUG00000007336) #17	ENSMAUG00000019903	Ddx17 (ENSMAUG00000020476) #18	Dmc1 (ENSMAUG00000021747) #19	Cby1 (ENSMAUG00000012412) #21	ENSMAUG00000020296 #22	Josd1 (ENSMAUG00000020861) #23	ENSMAUG00000012155	ENSMAUG00000006203 #26	Nptxr (ENSMAUG00000021222) #27	Apobec3 (ENSMAUG00000011683)	Cbx7 (ENSMAUG00000021987) #29	Pdgfb (ENSMAUG00000010966) #30	Rpl3 (ENSMAUG00000021888) #31	Syngr1 (ENSMAUG00000002156) #32	ENSMAUG00000021992 #33	Mgat3 (ENSMAUG00000001637) #34	Mief1 (ENSMAUG00000004657) #35	Atf4 (ENSMAUG00000012102) #36	Rps19bp1 (ENSMAUG00000012429) #37	Cacna1i (ENSMAUG00000008968)
Golden Hamster	MODERN SPECIES	627	Cox10 (ENSMAUG00000002188)	Hs3st3b1 (ENSMAUG00000005757)	Tekt3 (ENSMAUG00000020704)	Tvp23b (ENSMAUG00000008345)	Fbxw10 (ENSMAUG00000021165)	Zfp286 (ENSMAUG00000020040)	ENSMAUG00000020454	ENSMAUG00000010614	ENSMAUG00000012542	Lrrc75a (ENSMAUG00000008492)	Trpv2 (ENSMAUG00000001693)	ENSMAUG00000010267	Cenpv (ENSMAUG00000002045)	ENSMAUG00000010445	Pigl (ENSMAUG00000021025)	ENSMAUG00000022063 #22	Ncor1 (ENSMAUG00000019620)	Ttc19 (ENSMAUG00000020275)	Zswim7 (ENSMAUG00000021670)	Adora2b (ENSMAUG00000002103)	Specc1 (ENSMAUG00000009500)	Akap10 (ENSMAUG00000008215)	Ulk2 (ENSMAUG00000019111)	Prpsap2 (ENSMAUG00000013268)	Slc5a10 (ENSMAUG00000013948)	Fam83g (ENSMAUG00000017827)	Grap (ENSMAUG00000003227)	Epn2 (ENSMAUG00000012029)	ENSMAUG00000011169	Mapk7 (ENSMAUG00000012966)	Mfap4 (ENSMAUG00000015028)
Chinese hamster chok1gshd	MODERN SPECIES	1	POLR2F (ENSCGRG00001023541) #7	Sox10 (ENSCGRG00001020938) #8	Pick1 (ENSCGRG00001021170) #9	Slc16a8 (ENSCGRG00001021978) #10	Baiap2l2 (ENSCGRG00001016205) #11	Pla2g6 (ENSCGRG00001016761) #12	Maff (ENSCGRG00001023276) #13	Tmem184b (ENSCGRG00001019130) #14	Csnk1e (ENSCGRG00001020326) #15	Kcnj4 (ENSCGRG00001009281) #16	Kdelr3 (ENSCGRG00001017350) #17	Ddx17 (ENSCGRG00001023050) #18	Dmc1 (ENSCGRG00001005679) #19	Fam227a (ENSCGRG00001011936) #20	Cby1 (ENSCGRG00001022945) #21	Tomm22 (ENSCGRG00001018593) #22	Josd1 (ENSCGRG00001018907) #23	Gtpbp1 (ENSCGRG00001016791) #24	Sun2 (ENSCGRG00001017050) #25	ENSCGRG00001020627 #26	Nptxr (ENSCGRG00001020831) #27	Cbx6 (ENSCGRG00001023499) #28	Apobec3 (ENSCGRG00001022976)	Cbx7 (ENSCGRG00001018782) #29	Pdgfb (ENSCGRG00001019045) #30	Rpl3 (ENSCGRG00001021342) #31	Syngr1 (ENSCGRG00001021733) #32	ENSCGRG00001021963 #33	Mgat3 (ENSCGRG00001010541) #34	Mief1 (ENSCGRG00001018126) #35	Atf4 (ENSCGRG00001018678) #36
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT00530000063801.a #36
Northern American deer mouse	MODERN SPECIES	12	Polr2f (ENSPEMG00000008322) #7	Sox10 (ENSPEMG00000025162) #8	Pick1 (ENSPEMG00000012658) #9	Slc16a8 (ENSPEMG00000015839) #10	Baiap2l2 (ENSPEMG00000017444) #11	Pla2g6 (ENSPEMG00000000395) #12	Maff (ENSPEMG00000029295) #13	Tmem184b (ENSPEMG00000007707) #14	Csnk1e (ENSPEMG00000020952) #15	Kcnj4 (ENSPEMG00000020978) #16	Kdelr3 (ENSPEMG00000025485) #17	Ddx17 (ENSPEMG00000021115) #18	Dmc1 (ENSPEMG00000021139) #19	Fam227a (ENSPEMG00000021220) #20	Cby1 (ENSPEMG00000028273) #21	Tomm22 (ENSPEMG00000022564) #22	Josd1 (ENSPEMG00000028718) #23	Gtpbp1 (ENSPEMG00000022105) #24	Sun2 (ENSPEMG00000005360) #25	ENSPEMG00000025592 #26	Nptxr (ENSPEMG00000014192) #27	Cbx6 (ENSPEMG00000026924) #28	Apobec3 (ENSPEMG00000000456)	ENSPEMG00000030420	Cbx7 (ENSPEMG00000017298) #29	Pdgfb (ENSPEMG00000010524) #30	Rpl3 (ENSPEMG00000012563) #31	Syngr1 (ENSPEMG00000017114) #32	Tab1 (ENSPEMG00000000776) #33	Mgat3 (ENSPEMG00000017229) #34	Gm55359 (ENSPEMG00000025628)
Prairie vole	MODERN SPECIES	2	Polr2f (ENSMOCG00000000237) #7	Sox10 (ENSMOCG00000021747) #8	Pick1 (ENSMOCG00000006961) #9	Slc16a8 (ENSMOCG00000020185) #10	Baiap2l2 (ENSMOCG00000022974) #11	Pla2g6 (ENSMOCG00000016706) #12	Maff (ENSMOCG00000016841) #13	Tmem184b (ENSMOCG00000022894) #14	Csnk1e (ENSMOCG00000019912) #15	Kcnj4 (ENSMOCG00000001301) #16	Kdelr3 (ENSMOCG00000015416) #17	Ddx17 (ENSMOCG00000010769) #18	Dmc1 (ENSMOCG00000006879) #19	Fam227a (ENSMOCG00000007156) #20	Cby1 (ENSMOCG00000015695) #21	Tomm22 (ENSMOCG00000001931) #22	Josd1 (ENSMOCG00000007178) #23	Gtpbp1 (ENSMOCG00000022043) #24	Sun2 (ENSMOCG00000022083) #25	ENSMOCG00000003313 #26	Nptxr (ENSMOCG00000017145) #27	Apobec3 (ENSMOCG00000021576)	Cbx7 (ENSMOCG00000004891) #29	Pdgfb (ENSMOCG00000002403) #30	ENSMOCG00000000700 #31	Syngr1 (ENSMOCG00000019576) #32	Tab1 (ENSMOCG00000017456) #33	Mgat3 (ENSMOCG00000015359) #34	Mief1 (ENSMOCG00000011535) #35	Atf4 (ENSMOCG00000016614) #36	Rps19bp1 (ENSMOCG00000015370) #37
Murinae	ANCESTRAL SPECIES	10	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Rat	MODERN SPECIES	17	RGD1359634 (ENSRNOG00000011170)	Polr2f (ENSRNOG00000011214) #7	Sox10 (ENSRNOG00000011305) #8	Pick1 (ENSRNOG00000011507) #9	Slc16a8 (ENSRNOG00000012090) #10	Baiap2l2 (ENSRNOG00000012215) #11	Pla2g6 (ENSRNOG00000012295) #12	Maff (ENSRNOG00000012886) #13	Tmem184b (ENSRNOG00000022802) #14	Csnk1e (ENSRNOG00000013076) #15	Kcnj4 (ENSRNOG00000013869) #16	Kdelr3 (ENSRNOG00000013577) #17	Ddx17 (ENSRNOG00000051170) #18	Dmc1 (ENSRNOG00000013807) #19	Fam227a (ENSRNOG00000021795) #20	Tomm22 (ENSRNOG00000014058) #22	Josd1 (ENSRNOG00000014440) #23	Gtpbp1 (ENSRNOG00000014634) #24	Sun2 (ENSRNOG00000015177) #25	Dnal4 (ENSRNOG00000015583) #26	Nptxr (ENSRNOG00000016156) #27	Cbx6 (ENSRNOG00000046955) #28	Apobec3 (ENSRNOG00000016852)	AC128476.2 (ENSRNOG00000057782)	Cbx7 (ENSRNOG00000016875) #29	Pdgfb (ENSRNOG00000017197) #30	Rpl3 (ENSRNOG00000016896) #31	Syngr1 (ENSRNOG00000017108) #32	Mgat3 (ENSRNOG00000017434) #34	Tab1 (ENSRNOG00000017285) #33	Mief1 (ENSRNOG00000017553) #35
Mus	ANCESTRAL SPECIES	11	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT01030000234887
Shrew mouse	MODERN SPECIES	8	Polr2f (MGP_PahariEiJ_G0020008) #7	Sox10 (MGP_PahariEiJ_G0020009) #8	Pick1 (MGP_PahariEiJ_G0020010) #9	Slc16a8 (MGP_PahariEiJ_G0020011) #10	Baiap2l2 (MGP_PahariEiJ_G0020012) #11	Pla2g6 (MGP_PahariEiJ_G0020013) #12	Maff (MGP_PahariEiJ_G0020014) #13	Tmem184b (MGP_PahariEiJ_G0020015) #14	Csnk1e (MGP_PahariEiJ_G0020016) #15	Kcnj4 (MGP_PahariEiJ_G0020017) #16	Kdelr3 (MGP_PahariEiJ_G0020018) #17	Ddx17 (MGP_PahariEiJ_G0020019) #18	Dmc1 (MGP_PahariEiJ_G0020020) #19	Fam227a (MGP_PahariEiJ_G0020021) #20	Cby1 (MGP_PahariEiJ_G0020022) #21	Tomm22 (MGP_PahariEiJ_G0020023) #22	Josd1 (MGP_PahariEiJ_G0020024) #23	Gtpbp1 (MGP_PahariEiJ_G0020025) #24	Sun2 (MGP_PahariEiJ_G0020026) #25	Dnal4 (MGP_PahariEiJ_G0020027)	Nptxr (MGP_PahariEiJ_G0020028) #27	MGP_PahariEiJ_G0020029 #27	Cbx6 (MGP_PahariEiJ_G0020030) #28	Apobec3 (MGP_PahariEiJ_G0020031)	Cbx7 (MGP_PahariEiJ_G0020032) #29	Pdgfb (MGP_PahariEiJ_G0020033) #30	Rpl3 (MGP_PahariEiJ_G0020034) #31	Syngr1 (MGP_PahariEiJ_G0020035) #32	Tab1 (MGP_PahariEiJ_G0020036) #33	Mgat3 (MGP_PahariEiJ_G0020037) #34	Mief1 (MGP_PahariEiJ_G0020038) #35
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT01030000234887
Ryukyu mouse	MODERN SPECIES	6	Polr2f (MGP_CAROLIEiJ_G0020006) #7	Sox10 (MGP_CAROLIEiJ_G0020007) #8	Pick1 (MGP_CAROLIEiJ_G0020008) #9	Slc16a8 (MGP_CAROLIEiJ_G0020009) #10	Baiap2l2 (MGP_CAROLIEiJ_G0020010) #11	Pla2g6 (MGP_CAROLIEiJ_G0020011) #12	Maff (MGP_CAROLIEiJ_G0020012) #13	Tmem184b (MGP_CAROLIEiJ_G0020013) #14	Csnk1e (MGP_CAROLIEiJ_G0020014) #15	Kcnj4 (MGP_CAROLIEiJ_G0020015) #16	Kdelr3 (MGP_CAROLIEiJ_G0020016) #17	Ddx17 (MGP_CAROLIEiJ_G0020017) #18	Dmc1 (MGP_CAROLIEiJ_G0020018) #19	Fam227a (MGP_CAROLIEiJ_G0020019) #20	Cby1 (MGP_CAROLIEiJ_G0020020) #21	Tomm22 (MGP_CAROLIEiJ_G0020021) #22	Josd1 (MGP_CAROLIEiJ_G0020022) #23	Gtpbp1 (MGP_CAROLIEiJ_G0020023) #24	Sun2 (MGP_CAROLIEiJ_G0020024) #25	Dnal4 (MGP_CAROLIEiJ_G0020025)	Nptxr (MGP_CAROLIEiJ_G0020026) #27	MGP_CAROLIEiJ_G0020027 #27	Cbx6 (MGP_CAROLIEiJ_G0020028) #28	Apobec3 (MGP_CAROLIEiJ_G0020029)	Cbx7 (MGP_CAROLIEiJ_G0020030) #29	Pdgfb (MGP_CAROLIEiJ_G0020031) #30	MGP_CAROLIEiJ_G0020032 ##31	Syngr1 (MGP_CAROLIEiJ_G0020033) #32	Tab1 (MGP_CAROLIEiJ_G0020034) #33	Mgat3 (MGP_CAROLIEiJ_G0020035) #34	Mief1 (MGP_CAROLIEiJ_G0020036) #35
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT01030000234887
Mouse	MODERN SPECIES	6	Sox10 (ENSMUSG00000033006) #8	Pick1 (ENSMUSG00000068206) #9	Gm49486 (ENSMUSG00000116121)	Slc16a8 (ENSMUSG00000032988) #10	Baiap2l2 (ENSMUSG00000018126) #11	Pla2g6 (ENSMUSG00000042632) #12	Maff (ENSMUSG00000042622) #13	Tmem184b (ENSMUSG00000009035) #14	Csnk1e (ENSMUSG00000022433) #15	Kcnj4 (ENSMUSG00000044216) #16	Kdelr3 (ENSMUSG00000010830) #17	Ddx17 (ENSMUSG00000055065) #18	Dmc1 (ENSMUSG00000022429) #19	Fam227a (ENSMUSG00000042564) #20	Cby1 (ENSMUSG00000022428) #21	Tomm22 (ENSMUSG00000022427) #22	Josd1 (ENSMUSG00000022426) #23	Gtpbp1 (ENSMUSG00000042535) #24	Sun2 (ENSMUSG00000042524) #25	Dnal4 (ENSMUSG00000022420)	Nptxr (ENSMUSG00000022421) #27	Npcd (ENSMUSG00000089837)	Cbx6 (ENSMUSG00000089715) #28	Apobec3 (ENSMUSG00000009585)	Cbx7 (ENSMUSG00000053411) #29	Pdgfb (ENSMUSG00000000489) #30	Rpl3 (ENSMUSG00000060036) #31	Syngr1 (ENSMUSG00000022415) #32	Tab1 (ENSMUSG00000022414) #33	Mgat3 (ENSMUSG00000042428) #34	Mief1 (ENSMUSG00000022412) #35
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000166105	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35	ENSGT00530000063801.a #36
spretus	MODERN SPECIES	6	Polr2f (MGP_SPRETEiJ_G0020904) #7	Sox10 (MGP_SPRETEiJ_G0020905) #8	Pick1 (MGP_SPRETEiJ_G0020906) #9	Slc16a8 (MGP_SPRETEiJ_G0020907) #10	Baiap2l2 (MGP_SPRETEiJ_G0020908) #11	Pla2g6 (MGP_SPRETEiJ_G0020909) #12	Maff (MGP_SPRETEiJ_G0020910) #13	Tmem184b (MGP_SPRETEiJ_G0020911) #14	Csnk1e (MGP_SPRETEiJ_G0020912) #15	Kcnj4 (MGP_SPRETEiJ_G0020913) #16	Kdelr3 (MGP_SPRETEiJ_G0020914) #17	Ddx17 (MGP_SPRETEiJ_G0020915) #18	Dmc1 (MGP_SPRETEiJ_G0020916) #19	Fam227a (MGP_SPRETEiJ_G0020917) #20	Cby1 (MGP_SPRETEiJ_G0020918) #21	Tomm22 (MGP_SPRETEiJ_G0020919) #22	Josd1 (MGP_SPRETEiJ_G0020920) #23	Gtpbp1 (MGP_SPRETEiJ_G0020921) #24	Sun2 (MGP_SPRETEiJ_G0020922) #25	Dnal4 (MGP_SPRETEiJ_G0020923)	Nptxr (MGP_SPRETEiJ_G0020924) #27	MGP_SPRETEiJ_G0020925 #27	Cbx6 (MGP_SPRETEiJ_G0020926) #28	Apobec3 (MGP_SPRETEiJ_G0020927)	Cbx7 (MGP_SPRETEiJ_G0020928) #29	Pdgfb (MGP_SPRETEiJ_G0020929) #30	Rpl3 (MGP_SPRETEiJ_G0020930) #31	Syngr1 (MGP_SPRETEiJ_G0020931) #32	Tab1 (MGP_SPRETEiJ_G0020932) #33	Mgat3 (MGP_SPRETEiJ_G0020933) #34	Mief1 (MGP_SPRETEiJ_G0020934) #35
Steppe mouse	DUPLICATION
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3258	Frmpd2 (ENSMSIG00000013415)	Ptpn20 (ENSMSIG00000013483)	ENSMSIG00000013539	Gdf2 (ENSMSIG00000013569)	Rbp3 (ENSMSIG00000013580)	Zfp488 (ENSMSIG00000013602)	Gm30083 (ENSMSIG00000013609)	Gm5460 (ENSMSIG00000013673)	A630023A22Rik (ENSMSIG00000013763)	Antxrl (ENSMSIG00000013787)	Anxa8 (ENSMSIG00000013816)	Npy4r (ENSMSIG00000013881)	Gprin2 (ENSMSIG00000013885)	Syt15 (ENSMSIG00000013893)	Shld2 (ENSMSIG00000013927)	ENSMSIG00000013997 #22	Dmrtb1 (ENSMSIG00000014025)	Glis1 (ENSMSIG00000014034)	Ndc1 (ENSMSIG00000014064)	Yipf1 (ENSMSIG00000014093)	Dio1 (ENSMSIG00000014137)	Hspb11 (ENSMSIG00000014150)	Lrrc42 (ENSMSIG00000014171)	Ldlrad1 (ENSMSIG00000014211)	Tmem59 (ENSMSIG00000014224)	Tceanc2 (ENSMSIG00000014276)	Cdcp2 (ENSMSIG00000014299)	Cyb5rl (ENSMSIG00000014317)	Mrpl37 (ENSMSIG00000014453)	Ssbp3 (ENSMSIG00000014470)
Steppe mouse	MODERN SPECIES	14							ENSMSIG00000011801	Umps (ENSMSIG00000011773)	Itgb5 (ENSMSIG00000011712)	ENSMSIG00000011690	ENSMSIG00000011673	Slc12a8 (ENSMSIG00000011450)	Zfp148 (ENSMSIG00000011371)	Snx4 (ENSMSIG00000011319)	Osbpl11 (ENSMSIG00000011262)	ENSMSIG00000011251 #22	Lmln (ENSMSIG00000011200)	ENSMSIG00000011134	Lrch3 (ENSMSIG00000010936)	Fyttd1 (ENSMSIG00000010860)	Rubcn (ENSMSIG00000010232)	Muc20 (ENSMSIG00000010193)	ENSMSIG00000008577	Tnk2 (ENSMSIG00000008368)	Tfrc (ENSMSIG00000008256)	Zdhhc19 (ENSMSIG00000008234)	Slc51a (ENSMSIG00000008209)	ENSMSIG00000008198	ENSMSIG00000008183
Steppe mouse	MODERN SPECIES	3124							ENSMSIG00000003420 #13	Tmem184b (ENSMSIG00000003333) #14	Csnk1e (ENSMSIG00000003247) #15	Kcnj4 (ENSMSIG00000003234) #16	Kdelr3 (ENSMSIG00000003214) #17	Ddx17 (ENSMSIG00000002893) #18	Dmc1 (ENSMSIG00000002769) #19	Fam227a (ENSMSIG00000002630) #20	Cby1 (ENSMSIG00000002604) #21	ENSMSIG00000002572 #22	Josd1 (ENSMSIG00000002544) #23	Gtpbp1 (ENSMSIG00000002462) #24	Sun2 (ENSMSIG00000002086) #25	Dnal4 (ENSMSIG00000002031)	Nptxr (ENSMSIG00000001981) #27	Cbx6 (ENSMSIG00000001905) #28	Apobec3 (ENSMSIG00000028939)	Cbx7 (ENSMSIG00000028925) #29	Pdgfb (ENSMSIG00000028914) #30	ENSMSIG00000028900 #31	Syngr1 (ENSMSIG00000028894) #32	Tab1 (ENSMSIG00000028888) #33	Mgat3 (ENSMSIG00000028881) #34	Mief1 (ENSMSIG00000028872) #35	Atf4 (ENSMSIG00000028868) #36
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	185	ENSJJAG00000023672	Scnn1b (ENSJJAG00000022984)	Cog7 (ENSJJAG00000021865)	Gga2 (ENSJJAG00000015002)	ENSJJAG00000010879	Ears2 (ENSJJAG00000008606)	Ubfd1 (ENSJJAG00000000286)	ENSJJAG00000020153	ENSJJAG00000018943	Dctn5 (ENSJJAG00000012532)	Plk1 (ENSJJAG00000019870)	Ern2 (ENSJJAG00000015169)	Chp2 (ENSJJAG00000013230)	Prkcb (ENSJJAG00000005803)	Cacng3 (ENSJJAG00000024261)	ENSJJAG00000000870 #22	ENSJJAG00000000843	Rbbp6 (ENSJJAG00000014549)	ENSJJAG00000018503	ENSJJAG00000016446	Slc5a11 (ENSJJAG00000011595)	ENSJJAG00000023824
Lesser Egyptian jerboa	MODERN SPECIES	42	Polr2f (ENSJJAG00000008097) #7	Sox10 (ENSJJAG00000005061) #8	Pick1 (ENSJJAG00000008743) #9	Slc16a8 (ENSJJAG00000008544) #10	Baiap2l2 (ENSJJAG00000013471) #11	Pla2g6 (ENSJJAG00000013671) #12	Maff (ENSJJAG00000017200) #13	Tmem184b (ENSJJAG00000017531) #14	Csnk1e (ENSJJAG00000009630) #15	Kcnj4 (ENSJJAG00000008916) #16	Kdelr3 (ENSJJAG00000010108) #17	Ddx17 (ENSJJAG00000011350) #18	Dmc1 (ENSJJAG00000015648) #19	Fam227a (ENSJJAG00000009801) #20	Cby1 (ENSJJAG00000014095) #21	ENSJJAG00000011941 #22	Josd1 (ENSJJAG00000011112) #23	Gtpbp1 (ENSJJAG00000011437) #24	Sun2 (ENSJJAG00000014510) #25	ENSJJAG00000014301 #26	Nptxr (ENSJJAG00000014759) #27	ENSJJAG00000016840	Cbx7 (ENSJJAG00000017220) #29	Pdgfb (ENSJJAG00000016430) #30	Rpl3 (ENSJJAG00000015596) #31	Syngr1 (ENSJJAG00000014672) #32	Tab1 (ENSJJAG00000011785) #33	Mgat3 (ENSJJAG00000014337) #34	Mief1 (ENSJJAG00000015759) #35	ENSJJAG00000015146 #36	Rps19bp1 (ENSJJAG00000013931) #37
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00950000185175	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00390000010231	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00390000014000.j	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00390000010231	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398 #19	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00390000014000.j	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35
Degu	DUPLICATION
Degu	MODERN SPECIES	105	C22orf23 (ENSODEG00000011296)	POLR2F (ENSODEG00000014123) #7	SOX10 (ENSODEG00000011808) #8	PICK1 (ENSODEG00000011854) #9	SLC16A8 (ENSODEG00000012705) #10	BAIAP2L2 (ENSODEG00000012828) #11	PLA2G6 (ENSODEG00000012170) #12	MAFF (ENSODEG00000012952) #13	TMEM184B (ENSODEG00000012793) #14	CSNK1E (ENSODEG00000013427) #15	KCNJ4 (ENSODEG00000012639) #16	KDELR3 (ENSODEG00000013049) #17	DDX17 (ENSODEG00000013118) #18	DMC1 (ENSODEG00000013866) #19	CBY1 (ENSODEG00000012784) #21	ENSODEG00000012101 #22	ENSODEG00000011910 #23	ENSODEG00000011619	GTPBP1 (ENSODEG00000012443) #24	ENSODEG00000019931	SUN2 (ENSODEG00000012534) #25	DNAL4 (ENSODEG00000013596) #26	NPTXR (ENSODEG00000012380) #27	ENSODEG00000012367 #28	ENSODEG00000012358	ENSODEG00000020029	CBX7 (ENSODEG00000013496) #29	PDGFB (ENSODEG00000012860) #30	ENSODEG00000013672 #31	SYNGR1 (ENSODEG00000016219) #32	TAB1 (ENSODEG00000015803) #33
Degu	MODERN SPECIES	65	ENSODEG00000008459	TNFAIP3 (ENSODEG00000008925)	ENSODEG00000019565	OLIG3 (ENSODEG00000019534)	ENSODEG00000019506	ENSODEG00000008408	IL22RA2 (ENSODEG00000007775)	IL20RA (ENSODEG00000006756)	SLC35D3 (ENSODEG00000006620)	ENSODEG00000008240	ENSODEG00000008040	MAP7 (ENSODEG00000008448)	ENSODEG00000006806	MTFR2 (ENSODEG00000006976)	PDE7B (ENSODEG00000007023)	ENSODEG00000007137 #22	ENSODEG00000006953	ENSODEG00000019597	ENSODEG00000008684	HBS1L (ENSODEG00000008959)	ALDH8A1 (ENSODEG00000007514)	ENSODEG00000006585	SLC2A12 (ENSODEG00000007816)	ENSODEG00000006582	TCF21 (ENSODEG00000007820)	ENSODEG00000019436	FNDC1 (ENSODEG00000007591)	ENSODEG00000009689	TAGAP (ENSODEG00000007094)	RSPH3 (ENSODEG00000006702)	ENSODEG00000007168
Long-tailed chinchilla	MODERN SPECIES	120	ENSCLAG00000016820	POLR2F (ENSCLAG00000017167) #7	SOX10 (ENSCLAG00000015273) #8	PICK1 (ENSCLAG00000015336) #9	SLC16A8 (ENSCLAG00000015657) #10	ENSCLAG00000016427 #11	PLA2G6 (ENSCLAG00000016964) #12	MAFF (ENSCLAG00000016603) #13	TMEM184B (ENSCLAG00000016941) #14	CSNK1E (ENSCLAG00000016892) #15	KCNJ4 (ENSCLAG00000016724) #16	KDELR3 (ENSCLAG00000017280) #17	DDX17 (ENSCLAG00000017294) #18	DMC1 (ENSCLAG00000017343) #19	CBY1 (ENSCLAG00000017105) #21	ENSCLAG00000016480 #22	JOSD1 (ENSCLAG00000016585) #23	GTPBP1 (ENSCLAG00000016782) #24	SUN2 (ENSCLAG00000016978) #25	ENSCLAG00000016664	DNAL4 (ENSCLAG00000015601) #26	NPTXR (ENSCLAG00000016215) #27	CBX6 (ENSCLAG00000017119) #28	ENSCLAG00000016615	CBX7 (ENSCLAG00000017313) #29	PDGFB (ENSCLAG00000016860) #30	RPL3 (ENSCLAG00000016387) #31	SYNGR1 (ENSCLAG00000015444) #32	TAB1 (ENSCLAG00000015972) #33	MGAT3 (ENSCLAG00000016469) #34	MIEF1 (ENSCLAG00000016517) #35
Guinea pig	MODERN SPECIES	28	MICALL1 (ENSCPOG00000001123)	C22orf23 (ENSCPOG00000001128)	POLR2F (ENSCPOG00000034094) #7	SOX10 (ENSCPOG00000031736) #8	PICK1 (ENSCPOG00000010802) #9	SLC16A8 (ENSCPOG00000024290) #10	BAIAP2L2 (ENSCPOG00000009775) #11	PLA2G6 (ENSCPOG00000027302) #12	TMEM184B (ENSCPOG00000001351) #14	CSNK1E (ENSCPOG00000005641) #15	KCNJ4 (ENSCPOG00000024834) #16	KDELR3 (ENSCPOG00000025069) #17	DDX17 (ENSCPOG00000011790) #18	DMC1 (ENSCPOG00000014221) #19	CBY1 (ENSCPOG00000020801) #21	TOMM22 (ENSCPOG00000036347) #22	JOSD1 (ENSCPOG00000038167) #23	GTPBP1 (ENSCPOG00000007667) #24	SUN2 (ENSCPOG00000005965) #25	ENSCPOG00000035460	DNAL4 (ENSCPOG00000035992) #26	NPTXR (ENSCPOG00000025747) #27	CBX6 (ENSCPOG00000035677) #28	ENSCPOG00000009257	CBX7 (ENSCPOG00000037430) #29	PDGFB (ENSCPOG00000005394) #30	RPL3 (ENSCPOG00000010038) #31	SYNGR1 (ENSCPOG00000035790) #32	TAB1 (ENSCPOG00000024643) #33	MIEF1 (ENSCPOG00000033670) #35	ATF4 (ENSCPOG00000022485) #36
Naked mole-rat female	MODERN SPECIES	24	POLR2F (ENSHGLG00000018942) #7	SOX10 (ENSHGLG00000049286) #8	PICK1 (ENSHGLG00000017480) #9	SLC16A8 (ENSHGLG00000016564) #10	BAIAP2L2 (ENSHGLG00000017908) #11	PLA2G6 (ENSHGLG00000013972) #12	MAFF (ENSHGLG00000032520) #13	TMEM184B (ENSHGLG00000016226) #14	ENSHGLG00000016006 #15	KCNJ4 (ENSHGLG00000015713) #16	KDELR3 (ENSHGLG00000013680) #17	DDX17 (ENSHGLG00000012568) #18	DMC1 (ENSHGLG00000014375) #19	ENSHGLG00000045949	CBY1 (ENSHGLG00000016267) #21	TOMM22 (ENSHGLG00000014103) #22	JOSD1 (ENSHGLG00000050780) #23	GTPBP1 (ENSHGLG00000010884) #24	SUN2 (ENSHGLG00000007051) #25	ENSHGLG00000037929	ENSHGLG00000016689	NPTXR (ENSHGLG00000050203) #27	CBX6 (ENSHGLG00000037540) #28	ENSHGLG00000049610	ENSHGLG00000041203	ENSHGLG00000040307	ENSHGLG00000017315	CBX7 (ENSHGLG00000036375) #29	PDGFB (ENSHGLG00000012214) #30	RPL3 (ENSHGLG00000010440) #31	ENSHGLG00000043353
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398.h #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Marmotini	ANCESTRAL SPECIES	4	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398.h #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162695	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT01030000234887
Alpin marmot	MODERN SPECIES	11	MICALL1 (ENSMMMG00000014755)	C22orf23 (ENSMMMG00000014691)	ENSMMMG00000014663 #7	SOX10 (ENSMMMG00000014647) #8	PICK1 (ENSMMMG00000014628) #9	SLC16A8 (ENSMMMG00000014593) #10	BAIAP2L2 (ENSMMMG00000014561) #11	PLA2G6 (ENSMMMG00000014384) #12	TMEM184B (ENSMMMG00000014319) #14	CSNK1E (ENSMMMG00000014289) #15	KCNJ4 (ENSMMMG00000014283) #16	KDELR3 (ENSMMMG00000014277) #17	DDX17 (ENSMMMG00000014113) #18	DMC1 (ENSMMMG00000014064) #19	CBY1 (ENSMMMG00000014042) #21	TOMM22 (ENSMMMG00000014030) #22	JOSD1 (ENSMMMG00000014025) #23	GTPBP1 (ENSMMMG00000014017) #24	SUN2 (ENSMMMG00000013976) #25	DNAL4 (ENSMMMG00000013967) #26	NPTXR (ENSMMMG00000013956) #27	ENSMMMG00000013952 #28	ENSMMMG00000013876	ENSMMMG00000013861
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00390000010415 #7	ENSGT00940000158046 #8	ENSGT00950000183040.B #9	ENSGT00940000161934 #10	ENSGT00940000153560.b.b.b #11	ENSGT00940000158756 #12	ENSGT00940000161112 #13	ENSGT00940000153861.b #14	ENSGT00940000153536.a.a #15	ENSGT01030000234586.A.b #16	ENSGT00390000004010.a.b.b #17	ENSGT00940000160049 #18	ENSGT00760000119398.h #19	ENSGT00940000162433 #20	ENSGT00940000153137.a.a #21	ENSGT00390000016475.h #22	ENSGT00390000009228.b #23	ENSGT00940000156054 #24	ENSGT00940000160024 #25	ENSGT00940000161265 #26	ENSGT00940000154405.a.b #27	ENSGT00940000154405.a.a #28	ENSGT00940000162772	ENSGT00940000158365 #29	ENSGT00940000157367 #30	ENSGT00390000017606.a.a.j #31	ENSGT00940000154431.e.a.e.a	ENSGT00950000182935.B.b.c #32	ENSGT00510000048276 #33	ENSGT00390000008221 #34	ENSGT00390000013127.a #35
Squirrel	MODERN SPECIES	92	ENSSTOG00000031300	POLR2F (ENSSTOG00000025722) #7	SOX10 (ENSSTOG00000025370) #8	PICK1 (ENSSTOG00000012800) #9	SLC16A8 (ENSSTOG00000020426) #10	BAIAP2L2 (ENSSTOG00000025451) #11	PLA2G6 (ENSSTOG00000005291) #12	MAFF (ENSSTOG00000025460) #13	TMEM184B (ENSSTOG00000005322) #14	CSNK1E (ENSSTOG00000005334) #15	KCNJ4 (ENSSTOG00000025708) #16	KDELR3 (ENSSTOG00000002629) #17	DDX17 (ENSSTOG00000013699) #18	DMC1 (ENSSTOG00000025006) #19	CBY1 (ENSSTOG00000010750) #21	TOMM22 (ENSSTOG00000030828) #22	JOSD1 (ENSSTOG00000024999) #23	GTPBP1 (ENSSTOG00000010766) #24	SUN2 (ENSSTOG00000026929) #25	DNAL4 (ENSSTOG00000022336) #26	NPTXR (ENSSTOG00000032195) #27	CBX6 (ENSSTOG00000022213) #28	ENSSTOG00000007125	CBX7 (ENSSTOG00000013366) #29	PDGFB (ENSSTOG00000022345) #30	RPL3 (ENSSTOG00000014559) #31	ENSSTOG00000025552	SYNGR1 (ENSSTOG00000023819) #32	TAB1 (ENSSTOG00000002357) #33	MGAT3 (ENSSTOG00000006745) #34	MIEF1 (ENSSTOG00000028799) #35
Arctic ground squirrel	MODERN SPECIES	496	POLR2F (ENSUPAG00010022368) #7	SOX10 (ENSUPAG00010022365) #8	PICK1 (ENSUPAG00010022363) #9	SLC16A8 (ENSUPAG00010022359) #10	BAIAP2L2 (ENSUPAG00010022356) #11	PLA2G6 (ENSUPAG00010022350) #12	MAFF (ENSUPAG00010022348) #13	TMEM184B (ENSUPAG00010022345) #14	CSNK1E (ENSUPAG00010022344) #15	KCNJ4 (ENSUPAG00010022342) #16	KDELR3 (ENSUPAG00010022341) #17	DDX17 (ENSUPAG00010022338) #18	DMC1 (ENSUPAG00010022336) #19	ENSUPAG00010022332 #20	CBY1 (ENSUPAG00010022328) #21	TOMM22 (ENSUPAG00010022327) #22	JOSD1 (ENSUPAG00010022326) #23	GTPBP1 (ENSUPAG00010022325) #24	SUN2 (ENSUPAG00010022310) #25	DNAL4 (ENSUPAG00010022304) #26	NPTXR (ENSUPAG00010022301) #27	CBX6 (ENSUPAG00010022300) #28	ENSUPAG00010022297	ENSUPAG00010022294	CBX7 (ENSUPAG00010022291) #29	PDGFB (ENSUPAG00010022290) #30	ENSUPAG00010022280 #31	ENSUPAG00010022279	SYNGR1 (ENSUPAG00010022277) #32	TAB1 (ENSUPAG00010022276) #33