Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Equus	ANCESTRAL SPECIES	1	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000002732.m.a #12	ENSGT00390000010799.u.b.a.a.a.b ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Horse	MODERN SPECIES	1	SLC17A7 (ENSECAG00000008206) #7	PIH1D1 (ENSECAG00000021267) #8	ALDH16A1 (ENSECAG00000023437) #9	ENSECAG00000038488 #10	RPL13A (ENSECAG00000015832) #11	RPS11 (ENSECAG00000000370) #12	FCGRT (ENSECAG00000002855) #13	RCN3 (ENSECAG00000010512) #14	NOSIP (ENSECAG00000010590) #15	PRRG2 (ENSECAG00000011504) #16	ENSECAG00000012525 #17	RRAS (ENSECAG00000016716) #18	ENSECAG00000017909 #19	IRF3 (ENSECAG00000018265) #20	BCL2L12 (ENSECAG00000022614) #21	PRMT1 (ENSECAG00000024076) #22	CPT1C (ENSECAG00000015556) #23	TSKS (ENSECAG00000023945) #24	AP2A1 (ENSECAG00000007134) #25	FUZ (ENSECAG00000019538) #26	MED25 (ENSECAG00000008563) #27	PTOV1 (ENSECAG00000014505) #28	PNKP (ENSECAG00000017461) #29	AKT1S1 (ENSECAG00000023285) #30	TBC1D17 (ENSECAG00000000665) #31	IL4I1 (ENSECAG00000018105) #32	NUP62 (ENSECAG00000006129) #33	ATF5 (ENSECAG00000018168) #34	ENSECAG00000019222 #35	VRK3 (ENSECAG00000020568) #36	ZNF473 (ENSECAG00000023381) #37
Donkey	MODERN SPECIES	18	PIH1D1 (ENSEASG00005004996) #8	ALDH16A1 (ENSEASG00005004997) #9	ENSEASG00005005002 #10	ENSEASG00005005007 ##11	RPS11 (ENSEASG00005034777) ##12	FCGRT (ENSEASG00005005020) #13	RCN3 (ENSEASG00005005046) #14	NOSIP (ENSEASG00005005049) #15	PRRG2 (ENSEASG00005005054) #16	ENSEASG00005037867 ##17	ENSEASG00005035361 #17	RRAS (ENSEASG00005005083) #18	SCAF1 (ENSEASG00005005102) #19	IRF3 (ENSEASG00005005140) #20	BCL2L12 (ENSEASG00005005229) #21	PRMT1 (ENSEASG00005005297) #22	ENSEASG00005030277	CPT1C (ENSEASG00005005975) #23	TSKS (ENSEASG00005026212) #24	AP2A1 (ENSEASG00005006948) #25	FUZ (ENSEASG00005007539) #26	MED25 (ENSEASG00005007549) #27	PTOV1 (ENSEASG00005007600) #28	PNKP (ENSEASG00005007616) #29	AKT1S1 (ENSEASG00005007647) #30	TBC1D17 (ENSEASG00005007710) #31	IL4I1 (ENSEASG00005008275) #32	NUP62 (ENSEASG00005008278) #33	ATF5 (ENSEASG00005025978) #34	ENSEASG00005023663 #35	VRK3 (ENSEASG00005008283) #36
Chiroptera	ANCESTRAL SPECIES	16	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36	ENSGT00840000130048 #37
Megabat	MODERN SPECIES	3816	SLC17A7 (ENSPVAG00000010952) #7	PIH1D1 (ENSPVAG00000010953) #8	ALDH16A1 (ENSPVAG00000010955) #9	FLT3LG (ENSPVAG00000010957) #10	RPL13A (ENSPVAG00000010958) #11	ENSPVAG00000010959	FCGRT (ENSPVAG00000010960) #13	RCN3 (ENSPVAG00000010961) #14	NOSIP (ENSPVAG00000010962) #15	PRRG2 (ENSPVAG00000010963) #16	PRR12 (ENSPVAG00000010965) #17	RRAS (ENSPVAG00000010966) #18	SCAF1 (ENSPVAG00000010967) #19	IRF3 (ENSPVAG00000010968) #20	BCL2L12 (ENSPVAG00000010969) #21	PRMT1 (ENSPVAG00000010970) #22	CPT1C (ENSPVAG00000010971) #23	TSKS (ENSPVAG00000010972) #24	AP2A1 (ENSPVAG00000010973) #25	FUZ (ENSPVAG00000010974) #26	MED25 (ENSPVAG00000010975) #27	PTOV1 (ENSPVAG00000010976) #28	PNKP (ENSPVAG00000010980) #29	AKT1S1 (ENSPVAG00000010983) #30	TBC1D17 (ENSPVAG00000010985) #31	IL4I1 (ENSPVAG00000010988) #32
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36	ENSGT00840000130048 #37
Greater horseshoe bat	MODERN SPECIES	6	SLC17A7 (ENSRFEG00010008954) #7	PIH1D1 (ENSRFEG00010009002) #8	ALDH16A1 (ENSRFEG00010009144) #9	FLT3LG (ENSRFEG00010009320) #10	RPL13A (ENSRFEG00010009364) #11	ENSRFEG00010009427 ##12	FCGRT (ENSRFEG00010009551) #13	RCN3 (ENSRFEG00010009608) #14	NOSIP (ENSRFEG00010009649) #15	PRRG2 (ENSRFEG00010009690) #16	PRR12 (ENSRFEG00010009738) #17	RRAS (ENSRFEG00010009871) #18	SCAF1 (ENSRFEG00010009912) #19	IRF3 (ENSRFEG00010009958) #20	BCL2L12 (ENSRFEG00010010039) #21	PRMT1 (ENSRFEG00010010147) #22	CPT1C (ENSRFEG00010010276) #23	TSKS (ENSRFEG00010010392) #24	AP2A1 (ENSRFEG00010010576) #25	FUZ (ENSRFEG00010010654) #26	MED25 (ENSRFEG00010010795) #27	PTOV1 (ENSRFEG00010011047) #28	PNKP (ENSRFEG00010011111) #29	AKT1S1 (ENSRFEG00010011184) #30	TBC1D17 (ENSRFEG00010011302) #31	IL4I1 (ENSRFEG00010011805) #32	NUP62 (ENSRFEG00010011827) #33	ATF5 (ENSRFEG00010011850) #34	ENSRFEG00010011885 #35	VRK3 (ENSRFEG00010011933) #36	ZNF473 (ENSRFEG00010012054) #37
Microbat	DUPLICATION
Microbat	MODERN SPECIES	2646																PRMT1 (ENSMLUG00000026704) #22	ENSMLUG00000017098 #23
Microbat	MODERN SPECIES	210																ENSMLUG00000017092 #22
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Mustelinae	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Ferret	MODERN SPECIES	291	SLC17A7 (ENSMPUG00000002665) #7	PIH1D1 (ENSMPUG00000002657) #8	ALDH16A1 (ENSMPUG00000002650) #9	FLT3LG (ENSMPUG00000002613) #10	RPL13A (ENSMPUG00000002604) #11	RPS11 (ENSMPUG00000002599) ##12	FCGRT (ENSMPUG00000002596) #13	RCN3 (ENSMPUG00000002591) #14	NOSIP (ENSMPUG00000002583) #15	PRRG2 (ENSMPUG00000002578) #16	PRR12 (ENSMPUG00000002538) #17	RRAS (ENSMPUG00000002515) #18	SCAF1 (ENSMPUG00000002481) #19	IRF3 (ENSMPUG00000002477) #20	BCL2L12 (ENSMPUG00000002461) #21	PRMT1 (ENSMPUG00000002401) #22	CPT1C (ENSMPUG00000002399) #23	TSKS (ENSMPUG00000002382) #24	AP2A1 (ENSMPUG00000002373) #25	FUZ (ENSMPUG00000002370) #26	MED25 (ENSMPUG00000002366) #27	PTOV1 (ENSMPUG00000002341) #28	PNKP (ENSMPUG00000002313) #29	AKT1S1 (ENSMPUG00000002307) #30	TBC1D17 (ENSMPUG00000002304) #31	IL4I1 (ENSMPUG00000002299) #32	NUP62 (ENSMPUG00000019361) #33	ATF5 (ENSMPUG00000002298) #34	ENSMPUG00000002294 #35	VRK3 (ENSMPUG00000002289) #36	ZNF473 (ENSMPUG00000002288) #37
American mink	MODERN SPECIES	135	SLC17A7 (ENSNVIG00000013475) #7	PIH1D1 (ENSNVIG00000013493) #8	A16A1 (ENSNVIG00000013514) #9	FLT3LG (ENSNVIG00000013636) #10	RPL13A (ENSNVIG00000013662) #11	RPS11 (ENSNVIG00000013696) ##12	FCGRT (ENSNVIG00000013729) #13	RCN3 (ENSNVIG00000013791) #14	NOSIP (ENSNVIG00000013805) #15	TMG2 (ENSNVIG00000013836) #16	PRR12 (ENSNVIG00000013877) #17	RRAS (ENSNVIG00000013892) #18	SCAF1 (ENSNVIG00000013902) #19	IRF3 (ENSNVIG00000013916) #20	BCL2L12 (ENSNVIG00000013961) #21	PRMT1 (ENSNVIG00000013974) #22	ENSNVIG00000014029	CPT1C (ENSNVIG00000014042) #23	ENSNVIG00000014121	TSKS (ENSNVIG00000014153) #24	AP2A1 (ENSNVIG00000014173) #25	FUZ (ENSNVIG00000014236) #26	MED25 (ENSNVIG00000014280) #27	PNKP (ENSNVIG00000014465) #29	AKT1S1 (ENSNVIG00000014694) #30	TBC1D17 (ENSNVIG00000014744) #31	IL4I1 (ENSNVIG00000014846) #32	NUP62 (ENSNVIG00000014915) #33	ATF5 (ENSNVIG00000014925) #34	ENSNVIG00000014945 #35	VRK3 (ENSNVIG00000015072) #36
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154700.pc #22
Giant Panda	MODERN SPECIES	709																ENSAMEG00000025561 #22
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154700.qc.a #22
Giant Panda	MODERN SPECIES	1352																ENSAMEG00000027277 #22
Ursidae	ANCESTRAL SPECIES	30	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b #11	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700.qc.b #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397.k #30	ENSGT00390000017397.l #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35
Giant Panda	MODERN SPECIES	3	SLC17A7 (ENSAMEG00000014111) #7	PIH1D1 (ENSAMEG00000014098) #8	ALDH16A1 (ENSAMEG00000014055) #9	ENSAMEG00000014041 #10	RPL13A (ENSAMEG00000014027) #11	RPS11 (ENSAMEG00000014020) ##12	ENSAMEG00000013998 #13	NOSIP (ENSAMEG00000013962) #15	RCN3 (ENSAMEG00000013976) #14	ENSAMEG00000013954 #16	PRR12 (ENSAMEG00000029999) #17	RRAS (ENSAMEG00000013931) #18	ENSAMEG00000013914 #19	IRF3 (ENSAMEG00000013892) #20	BCL2L12 (ENSAMEG00000013888) #21	PRMT1 (ENSAMEG00000013871) #22	ENSAMEG00000026436	CPT1C (ENSAMEG00000013819) #23	TSKS (ENSAMEG00000013807) #24	AP2A1 (ENSAMEG00000013743) #25	FUZ (ENSAMEG00000013731) #26	MED25 (ENSAMEG00000013694) #27	PTOV1 (ENSAMEG00000013684) #28	PNKP (ENSAMEG00000013669) #29	ENSAMEG00000031095 #30	TBC1D17 (ENSAMEG00000013612) #31	IL4I1 (ENSAMEG00000013573) #32	ENSAMEG00000025338 #33	ENSAMEG00000013546 #35	ENSAMEG00000013521 #36	ZNF473 (ENSAMEG00000013519) #37
Ursus	ANCESTRAL SPECIES	13	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700.qc.b #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397.k #30	ENSGT00390000017397.l #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Polar bear	MODERN SPECIES	115	KASH5 (ENSUMAG00000001846)	SLC17A7 (ENSUMAG00000001869) #7	PIH1D1 (ENSUMAG00000001943) #8	ALDH16A1 (ENSUMAG00000001975) #9	FLT3LG (ENSUMAG00000002372) #10	ENSUMAG00000002385 ##11	RPS11 (ENSUMAG00000002394) ##12	FCGRT (ENSUMAG00000002401) #13	RCN3 (ENSUMAG00000002431) #14	ENSUMAG00000002445 #15	ENSUMAG00000002454 #17	RRAS (ENSUMAG00000002464) #18	ENSUMAG00000002553 #19	IRF3 (ENSUMAG00000002587) #20	BCL2L12 (ENSUMAG00000002590) #21	PRMT1 (ENSUMAG00000002599) #22	ENSUMAG00000002609	CPT1C (ENSUMAG00000002617) #23	TSKS (ENSUMAG00000002694) #24	AP2A1 (ENSUMAG00000003074) #25	FUZ (ENSUMAG00000007031) #26	MED25 (ENSUMAG00000007065) #27	PNKP (ENSUMAG00000007091) #29	ENSUMAG00000007269 #30	TBC1D17 (ENSUMAG00000007279) #31	ATF5 (ENSUMAG00000007299) #34	ENSUMAG00000007305 #35	VRK3 (ENSUMAG00000007311) #36	ZNF473 (ENSUMAG00000007322) #37	ENSUMAG00000007331	ENSUMAG00000007333
American black bear	DUPLICATION
American black bear	MODERN SPECIES	256									NOSIP (ENSUAMG00000007336) #15	PRRG2 (ENSUAMG00000007342) #16	PRR12 (ENSUAMG00000007347) #17	RRAS (ENSUAMG00000007370) #18	ENSUAMG00000007371 #19	IRF3 (ENSUAMG00000007393) #20	BCL2L12 (ENSUAMG00000007401) #21	ENSUAMG00000007446 #22	ENSUAMG00000007447	CPT1C (ENSUAMG00000007449) #23	TSKS (ENSUAMG00000007453) #24
American black bear	MODERN SPECIES	582														TLR8 (ENSUAMG00000026707)	TLR7 (ENSUAMG00000026706)	ENSUAMG00000026705 #22	PRPS2 (ENSUAMG00000026704)	FRMPD4 (ENSUAMG00000026702)
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n.qb ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989.j #31	ENSGT00940000158989.i #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35
Red fox	MODERN SPECIES	101	SLC17A7 (ENSVVUG00000022638) #7	PIH1D1 (ENSVVUG00000022633) #8	ALDH16A1 (ENSVVUG00000022622) #9	FLT3LG (ENSVVUG00000022614) #10	RPL13A (ENSVVUG00000022597) ##11	RPS11 (ENSVVUG00000022590) ##12	FCGRT (ENSVVUG00000022578) #13	RCN3 (ENSVVUG00000022571) #14	PRRG2 (ENSVVUG00000022563) #16	NOSIP (ENSVVUG00000022560) #15	PRR12 (ENSVVUG00000022528) #17	RRAS (ENSVVUG00000022504) #18	SCAF1 (ENSVVUG00000022453) #19	IRF3 (ENSVVUG00000022435) #20	BCL2L12 (ENSVVUG00000022403) #21	PRMT1 (ENSVVUG00000021435) #22	ADM5 (ENSVVUG00000021360)	CPT1C (ENSVVUG00000021351) #23	TSKS (ENSVVUG00000021336) #24	AP2A1 (ENSVVUG00000021313) #25	FUZ (ENSVVUG00000021304) #26	MED25 (ENSVVUG00000021296) #27	PTOV1 (ENSVVUG00000021273) #28	PNKP (ENSVVUG00000020724) #29	ENSVVUG00000020673 #31	AKT1S1 (ENSVVUG00000020665) #30	ENSVVUG00000020411 #31	IL4I1 (ENSVVUG00000020406) #32	ATF5 (ENSVVUG00000020402) #34	ENSVVUG00000020400 #35	VRK3 (ENSVVUG00000020352) #36
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n.qb ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989.j #31	ENSGT00940000158989.i #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35
Dingo	MODERN SPECIES	125	SLC17A7 (ENSCAFG00020025100) #7	PIH1D1 (ENSCAFG00020025087) #8	ALDH16A1 (ENSCAFG00020024960) #9	ENSCAFG00020024917 ##11	RPS11 (ENSCAFG00020024909) ##12	FCGRT (ENSCAFG00020024896) #13	RCN3 (ENSCAFG00020024895) #14	NOSIP (ENSCAFG00020024889) #15	PRRG2 (ENSCAFG00020024886) #16	ENSCAFG00020024885 #17	ENSCAFG00020024884 #17	RRAS (ENSCAFG00020024879) #18	ENSCAFG00020024859 #19	IRF3 (ENSCAFG00020024853) #20	BCL2L12 (ENSCAFG00020024844) #21	PRMT1 (ENSCAFG00020024443) #22	ADM5 (ENSCAFG00020024378)	CPT1C (ENSCAFG00020023872) #23	TSKS (ENSCAFG00020023817) #24	AP2A1 (ENSCAFG00020023376) #25	FUZ (ENSCAFG00020023265) #26	MED25 (ENSCAFG00020023185) #27	PTOV1 (ENSCAFG00020023177) #28	PNKP (ENSCAFG00020023058) #29	AKT1S1 (ENSCAFG00020023033) #30	TBC1D17 (ENSCAFG00020022343) #31	IL4I1 (ENSCAFG00020022292) #32	NUP62 (ENSCAFG00020022287) #33	ATF5 (ENSCAFG00020022286) #34	ENSCAFG00020022275 #35	VRK3 (ENSCAFG00020022253) #36
Dog	DUPLICATION
Dog	MODERN SPECIES		SLC17A7 (ENSCAFG00845024908) #7	PIH1D1 (ENSCAFG00845024664) #8	ALDH16A1 (ENSCAFG00845024360) #9	FLT3LG (ENSCAFG00845024253) #10	RPL13A (ENSCAFG00845024086) ##11	RPS11 (ENSCAFG00845023961) ##12	FCGRT (ENSCAFG00845023878) #13	RCN3 (ENSCAFG00845023834) #14	NOSIP (ENSCAFG00845023744) #15	PRRG2 (ENSCAFG00845023671) #16	PRR12 (ENSCAFG00845023579) #17	RRAS (ENSCAFG00845023497) #18	SCAF1 (ENSCAFG00845023416) #19	IRF3 (ENSCAFG00845023315) #20	BCL2L12 (ENSCAFG00845023183) #21	PRMT1 (ENSCAFG00845022617) #22	ADM5 (ENSCAFG00845022542)	CPT1C (ENSCAFG00845022213) #23	TSKS (ENSCAFG00845022049) #24	AP2A1 (ENSCAFG00845021617) #25	FUZ (ENSCAFG00845021309) #26	MED25 (ENSCAFG00845020944) #27	PTOV1 (ENSCAFG00845020796) #28	PNKP (ENSCAFG00845020569) #29	AKT1S1 (ENSCAFG00845020448) #30	TBC1D17 (ENSCAFG00845020253) #31	NUP62 (ENSCAFG00845020207) #33	IL4I1 (ENSCAFG00845020119) #32	ATF5 (ENSCAFG00845020078) #34	ENSCAFG00845020034 #35	VRK3 (ENSCAFG00845019785) #36
Dog	MODERN SPECIES	28	ADTRP (ENSCAFG00845020946)	TMEM170B (ENSCAFG00845020894)	NEDD9 (ENSCAFG00845020672)	SMIM13 (ENSCAFG00845020618)	ELOVL2 (ENSCAFG00845020568)	SYCP2L (ENSCAFG00845020401)	GCM2 (ENSCAFG00845020331)	MAK (ENSCAFG00845020065)	ENSCAFG00845019919	PAK1IP1 (ENSCAFG00845019576)	ENSCAFG00845019493	GCNT2 (ENSCAFG00845019386)	TFAP2A (ENSCAFG00845019098)	ENSCAFG00845018859	ENSCAFG00845018795	ENSCAFG00845018729 #22	SLC35B3 (ENSCAFG00845018313)	ENSCAFG00845018157	ENSCAFG00845018125	EEF1E1 (ENSCAFG00845018087)	BLOC1S5 (ENSCAFG00845018047)	ENSCAFG00845017833	BMP6 (ENSCAFG00845017586)	SNRNP48 (ENSCAFG00845017442)	DSP (ENSCAFG00845017273)	ENSCAFG00845017231	RIOK1 (ENSCAFG00845017166)	CAGE1 (ENSCAFG00845017003)	SSR1 (ENSCAFG00845016889)	RREB1 (ENSCAFG00845016516)	LY86 (ENSCAFG00845016254)
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.wb ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Cat	DUPLICATION
Cat	MODERN SPECIES	246	SLC17A7 (ENSFCAG00000023749) #7	PIH1D1 (ENSFCAG00000009191) #8	ALDH16A1 (ENSFCAG00000009193) #9	FLT3LG (ENSFCAG00000030375) #10	RPL13A (ENSFCAG00000009194) ##11	RPS11 (ENSFCAG00000009196) ##12	FCGRT (ENSFCAG00000009199) #13	RCN3 (ENSFCAG00000000028) #14	NOSIP (ENSFCAG00000010497) #15	PRRG2 (ENSFCAG00000010498) #16	PRR12 (ENSFCAG00000025376) #17	RRAS (ENSFCAG00000024840) #18	SCAF1 (ENSFCAG00000045933) #19	IRF3 (ENSFCAG00000006074) #20	BCL2L12 (ENSFCAG00000034454) #21	PRMT1 (ENSFCAG00000006081) #22	ENSFCAG00000029354	CPT1C (ENSFCAG00000006084) #23	TSKS (ENSFCAG00000004426) #24	AP2A1 (ENSFCAG00000004429) #25	FUZ (ENSFCAG00000004433) #26	MED25 (ENSFCAG00000012164) #27	PTOV1 (ENSFCAG00000012170) #28	PNKP (ENSFCAG00000018550) #29	AKT1S1 (ENSFCAG00000039788) #30	TBC1D17 (ENSFCAG00000012173) #31	IL4I1 (ENSFCAG00000012174) #32	ATF5 (ENSFCAG00000045314) #34	ENSFCAG00000047261 #35	VRK3 (ENSFCAG00000007968) #36	ENSFCAG00000048160 #37
Cat	MODERN SPECIES	248	DCAF8 (ENSFCAG00000003925)	PEA15 (ENSFCAG00000003924)	CASQ1 (ENSFCAG00000003923)	ATP1A4 (ENSFCAG00000005397)	IGSF8 (ENSFCAG00000003922)	KCNJ9 (ENSFCAG00000015120)	KCNJ10 (ENSFCAG00000043392)	PIGM (ENSFCAG00000008535)	IGSF9 (ENSFCAG00000031301)	TAGLN2 (ENSFCAG00000016255)	CFAP45 (ENSFCAG00000008529)	VSIG8 (ENSFCAG00000008527)	SLAMF8 (ENSFCAG00000008526)	FCRL6 (ENSFCAG00000027611)	DUSP23 (ENSFCAG00000044162)	ENSFCAG00000031034 #22	CRP (ENSFCAG00000029168)	APCS (ENSFCAG00000010503)	OR10J4 (ENSFCAG00000023747)	ENSFCAG00000023051	OR10J3 (ENSFCAG00000029247)	FCER1A (ENSFCAG00000015276)	ACKR1 (ENSFCAG00000018619)	CADM3 (ENSFCAG00000015269)	ENSFCAG00000031916	ENSFCAG00000052900	OR6N2 (ENSFCAG00000044911)	ENSFCAG00000015615	ENSFCAG00000013455	ENSFCAG00000013454	OR6K3 (ENSFCAG00000040462)
Panthera	ANCESTRAL SPECIES	20	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.wb ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Tiger	DUPLICATION
Tiger	MODERN SPECIES	36	SLC17A7 (ENSPTIG00000019109) #7	PIH1D1 (ENSPTIG00000019309) #8	ALDH16A1 (ENSPTIG00000020037) #9	ENSPTIG00000021950 #10	ENSPTIG00000022003 ##11	RPS11 (ENSPTIG00000002272) ##12	FCGRT (ENSPTIG00000004003) #13	RCN3 (ENSPTIG00000007038) #14	ENSPTIG00000007453 #15	PRRG2 (ENSPTIG00000007792) #16	ENSPTIG00000008236 #17	RRAS (ENSPTIG00000011339) #18	ENSPTIG00000011785 #19	IRF3 (ENSPTIG00000012537) #20	ENSPTIG00000017895 #21	PRMT1 (ENSPTIG00000019080) #22	ENSPTIG00000020152	CPT1C (ENSPTIG00000020349) #23	TSKS (ENSPTIG00000006061) #24	ENSPTIG00000007548 #25	FUZ (ENSPTIG00000007760) #26	ENSPTIG00000015583 #28	ENSPTIG00000018221 #29	ENSPTIG00000018509 #31	ENSPTIG00000018814 #31	ENSPTIG00000020305 #32	NUP62 (ENSPTIG00000020841) #33	VRK3 (ENSPTIG00000021041) #36	ENSPTIG00000021495 #37	ENSPTIG00000005377	IZUMO2 (ENSPTIG00000021569)
Tiger	MODERN SPECIES	15	NEDD9 (ENSPTIG00000020169)	SMIM13 (ENSPTIG00000021553)	ELOVL2 (ENSPTIG00000021641)	SYCP2L (ENSPTIG00000001094)	GCM2 (ENSPTIG00000008744)	MAK (ENSPTIG00000009730)	TMEM14C (ENSPTIG00000014497)	PAK1IP1 (ENSPTIG00000014765)	C6orf52 (ENSPTIG00000015425)	GCNT2 (ENSPTIG00000016061)	ENSPTIG00000016215	TFAP2A (ENSPTIG00000016483)	ENSPTIG00000017987	ENSPTIG00000018659	SLC35B3 (ENSPTIG00000019956)	ENSPTIG00000001180 #22	EEF1E1 (ENSPTIG00000003209)	BLOC1S5 (ENSPTIG00000006195)	TXNDC5 (ENSPTIG00000008525)	BMP6 (ENSPTIG00000009664)	SNRNP48 (ENSPTIG00000013502)	DSP (ENSPTIG00000014227)	ENSPTIG00000018301	RIOK1 (ENSPTIG00000018545)	CAGE1 (ENSPTIG00000019168)	SSR1 (ENSPTIG00000006156)	LY86 (ENSPTIG00000014095)	F13A1 (ENSPTIG00000014413)	NRN1 (ENSPTIG00000015277)	FARS2 (ENSPTIG00000016684)	LYRM4 (ENSPTIG00000018145)
Panthera_a	ANCESTRAL SPECIES	22	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.b ##11	ENSGT00390000002732.n.wb ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
lion	DUPLICATION
lion	MODERN SPECIES	15	NKPD1 (ENSPLOG00000006206)	TRAPPC6A (ENSPLOG00000006245)	EXOC3L2 (ENSPLOG00000006300)	MARK4 (ENSPLOG00000006356)	CKM (ENSPLOG00000006406)	KLC3 (ENSPLOG00000006444)	ERCC2 (ENSPLOG00000006584)	PPP1R13L (ENSPLOG00000006777)	NOSIP (ENSPLOG00000006833) #15	PRRG2 (ENSPLOG00000006869) #16	PRR12 (ENSPLOG00000006927) #17	RRAS (ENSPLOG00000006992) #18	SCAF1 (ENSPLOG00000007025) #19	IRF3 (ENSPLOG00000007056) #20	BCL2L12 (ENSPLOG00000007139) #21	PRMT1 (ENSPLOG00000007276) #22	ENSPLOG00000007411	CPT1C (ENSPLOG00000007450) #23	TSKS (ENSPLOG00000007572) #24	AP2A1 (ENSPLOG00000007711) #25	FUZ (ENSPLOG00000007807) #26	MED25 (ENSPLOG00000008045) #27	PTOV1 (ENSPLOG00000008148) #28	PNKP (ENSPLOG00000008218) #29	AKT1S1 (ENSPLOG00000008339) #30	TBC1D17 (ENSPLOG00000008421) #31	IL4I1 (ENSPLOG00000008612) #32	NUP62 (ENSPLOG00000008706) #33	ATF5 (ENSPLOG00000008740) #34	ENSPLOG00000008795 #35	VRK3 (ENSPLOG00000009002) #36
lion	MODERN SPECIES	28	ENSPLOG00000015652	ADTRP (ENSPLOG00000015607)	TMEM170B (ENSPLOG00000015571)	NEDD9 (ENSPLOG00000015418)	SMIM13 (ENSPLOG00000015335)	ELOVL2 (ENSPLOG00000015241)	SYCP2L (ENSPLOG00000014969)	GCM2 (ENSPLOG00000014873)	MAK (ENSPLOG00000014775)	TMEM14C (ENSPLOG00000014694)	PAK1IP1 (ENSPLOG00000014566)	ENSPLOG00000014487	ENSPLOG00000014364	TFAP2A (ENSPLOG00000014182)	ENSPLOG00000014020	ENSPLOG00000013926 #22	SLC35B3 (ENSPLOG00000013879)	EEF1E1 (ENSPLOG00000013833)	BLOC1S5 (ENSPLOG00000013761)	TXNDC5 (ENSPLOG00000013690)	BMP6 (ENSPLOG00000013558)	SNRNP48 (ENSPLOG00000013502)	DSP (ENSPLOG00000013167)	RIOK1 (ENSPLOG00000013095)	CAGE1 (ENSPLOG00000012826)	SSR1 (ENSPLOG00000012706)	RREB1 (ENSPLOG00000019420)	LY86 (ENSPLOG00000019367)	ENSPLOG00000019351	F13A1 (ENSPLOG00000019314)	NRN1 (ENSPLOG00000019270)
leopard	DUPLICATION
leopard	MODERN SPECIES	103	GFY (ENSPPRG00000006208)	SLC17A7 (ENSPPRG00000007058) #7	PIH1D1 (ENSPPRG00000007680) #8	ALDH16A1 (ENSPPRG00000009904) #9	FLT3LG (ENSPPRG00000010392) #10	ENSPPRG00000011265 ##11	RPS11 (ENSPPRG00000012091) ##12	FCGRT (ENSPPRG00000013062) #13	RCN3 (ENSPPRG00000013222) #14	NOSIP (ENSPPRG00000014345) #15	PRRG2 (ENSPPRG00000015395) #16	RRAS (ENSPPRG00000020676) #18	SCAF1 (ENSPPRG00000023162) #19	IRF3 (ENSPPRG00000003901) #20	BCL2L12 (ENSPPRG00000006198) #21	PRMT1 (ENSPPRG00000007371) #22	ENSPPRG00000008136 #22	ENSPPRG00000008239	CPT1C (ENSPPRG00000009392) #23	TSKS (ENSPPRG00000010063) #24	AP2A1 (ENSPPRG00000012521) #25	FUZ (ENSPPRG00000015640) #26	MED25 (ENSPPRG00000001130) #27	PTOV1 (ENSPPRG00000005802) #28	PNKP (ENSPPRG00000009389) #29	AKT1S1 (ENSPPRG00000010679) #30	TBC1D17 (ENSPPRG00000012804) #31	IL4I1 (ENSPPRG00000013697) #32	ENSPPRG00000020072	VRK3 (ENSPPRG00000015169) #36	ENSPPRG00000015244 #37
leopard	MODERN SPECIES	79															SLC35B3 (ENSPPRG00000006882)	ENSPPRG00000006743 #22	ENSPPRG00000005821	BLOC1S5 (ENSPPRG00000005122)	TXNDC5 (ENSPPRG00000004740)	BMP6 (ENSPPRG00000004373)	SNRNP48 (ENSPPRG00000004283)	DSP (ENSPPRG00000003684)	RIOK1 (ENSPPRG00000001932)	CAGE1 (ENSPPRG00000001510)	SSR1 (ENSPPRG00000013065)	RREB1 (ENSPPRG00000012144)	LY86 (ENSPPRG00000008801)	F13A1 (ENSPPRG00000007966)	NRN1 (ENSPPRG00000007267)	ENSPPRG00000006505	FARS2 (ENSPPRG00000006027)
leopard	MODERN SPECIES	103	SLC17A7 (ENSPPRG00000007058) #7	PIH1D1 (ENSPPRG00000007680) #8	ALDH16A1 (ENSPPRG00000009904) #9	FLT3LG (ENSPPRG00000010392) #10	ENSPPRG00000011265 ##11	RPS11 (ENSPPRG00000012091) ##12	FCGRT (ENSPPRG00000013062) #13	RCN3 (ENSPPRG00000013222) #14	NOSIP (ENSPPRG00000014345) #15	PRRG2 (ENSPPRG00000015395) #16	RRAS (ENSPPRG00000020676) #18	SCAF1 (ENSPPRG00000023162) #19	IRF3 (ENSPPRG00000003901) #20	BCL2L12 (ENSPPRG00000006198) #21	PRMT1 (ENSPPRG00000007371) #22	ENSPPRG00000008136 #22	ENSPPRG00000008239	CPT1C (ENSPPRG00000009392) #23	TSKS (ENSPPRG00000010063) #24	AP2A1 (ENSPPRG00000012521) #25	FUZ (ENSPPRG00000015640) #26	MED25 (ENSPPRG00000001130) #27	PTOV1 (ENSPPRG00000005802) #28	PNKP (ENSPPRG00000009389) #29	AKT1S1 (ENSPPRG00000010679) #30	TBC1D17 (ENSPPRG00000012804) #31	IL4I1 (ENSPPRG00000013697) #32	ENSPPRG00000020072	VRK3 (ENSPPRG00000015169) #36	ENSPPRG00000015244 #37	ENSPPRG00000020181
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Camelidae	ANCESTRAL SPECIES	40	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439.d #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36	ENSGT00840000130048 #37
Arabian camel	MODERN SPECIES	35	SLC17A7 (ENSCDRG00005006915) #7	PIH1D1 (ENSCDRG00005006995) #8	ALDH16A1 (ENSCDRG00005007092) #9	FLT3LG (ENSCDRG00005007423) #10	ENSCDRG00005007454 ##11	RPS11 (ENSCDRG00005007529) ##12	FCGRT (ENSCDRG00005007612) #13	RCN3 (ENSCDRG00005007659) #14	NOSIP (ENSCDRG00005007735) #15	PRRG2 (ENSCDRG00005007833) #16	ENSCDRG00005007865 #17	RRAS (ENSCDRG00005007942) #18	ENSCDRG00005008031 #19	IRF3 (ENSCDRG00005008089) #20	BCL2L12 (ENSCDRG00005008265) #21	PRMT1 (ENSCDRG00005008397) #22	ENSCDRG00005008537	CPT1C (ENSCDRG00005008587) #23	TSKS (ENSCDRG00005008834) #24	AP2A1 (ENSCDRG00005008977) #25	FUZ (ENSCDRG00005009177) #26	MED25 (ENSCDRG00005009307) #27	PTOV1 (ENSCDRG00005009693) #28	PNKP (ENSCDRG00005009984) #29	AKT1S1 (ENSCDRG00005010128) #30	TBC1D17 (ENSCDRG00005010291) #31	IL4I1 (ENSCDRG00005010762) #32	NUP62 (ENSCDRG00005010815) #33	ENSCDRG00005010927 #35	VRK3 (ENSCDRG00005011211) #36	ZNF473 (ENSCDRG00005011477) #37
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00940000153096.b.c.b.a.b.a	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00940000153096.b.c.b.a.b.a	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35
Narwhal	MODERN SPECIES	296	SLC17A7 (ENSMMNG00015003297) #7	PIH1D1 (ENSMMNG00015003335) #8	ALDH16A1 (ENSMMNG00015003418) #9	ENSMMNG00015003557 #10	ENSMMNG00015003578 ##11	ENSMMNG00015003626 ##12	FCGRT (ENSMMNG00015003661) #13	RCN3 (ENSMMNG00015003695) #14	NOSIP (ENSMMNG00015003722) #15	PRRG2 (ENSMMNG00015003734) #16	PRR12 (ENSMMNG00015003767) #17	RRAS (ENSMMNG00015003824) #18	SCAF1 (ENSMMNG00015003847) #19	IRF3 (ENSMMNG00015003876) #20	BCL2L12 (ENSMMNG00015005053) #21	PRMT1 (ENSMMNG00015005090) #22	ENSMMNG00015005132	CPT1C (ENSMMNG00015005146) #23	ENSMMNG00015005171	TSKS (ENSMMNG00015005180) #24	AP2A1 (ENSMMNG00015005214) #25	FUZ (ENSMMNG00015005271) #26	MED25 (ENSMMNG00015005365) #27	PNKP (ENSMMNG00015005451) #29	AKT1S1 (ENSMMNG00015005500) #30	TBC1D17 (ENSMMNG00015005552) #31	IL4I1 (ENSMMNG00015005634) #32	NUP62 (ENSMMNG00015005672) #33	ATF5 (ENSMMNG00015005682) #34	ENSMMNG00015005704 #35	VRK3 (ENSMMNG00015005758) #36
Beluga whale	MODERN SPECIES	14	PIH1D1 (ENSDLEG00000005667) #8	ALDH16A1 (ENSDLEG00000005644) #9	FLT3LG (ENSDLEG00000005583) #10	RPL13A (ENSDLEG00000005530) ##11	RPS11 (ENSDLEG00000005522) ##12	FCGRT (ENSDLEG00000005485) #13	RCN3 (ENSDLEG00000005474) #14	ENSDLEG00000005466 #15	PRRG2 (ENSDLEG00000005453) #16	PRR12 (ENSDLEG00000005433) #17	RRAS (ENSDLEG00000005402) #18	SCAF1 (ENSDLEG00000005393) #19	IRF3 (ENSDLEG00000005363) #20	BCL2L12 (ENSDLEG00000005332) #21	ENSDLEG00000005326	PRMT1 (ENSDLEG00000005316) #22	ADM5 (ENSDLEG00000005309)	CPT1C (ENSDLEG00000004382) #23	ENSDLEG00000004185	ENSDLEG00000004141 #24	ENSDLEG00000004131 ##25	ENSDLEG00000004126	ENSDLEG00000004071 #24	AP2A1 (ENSDLEG00000003833) #25	FUZ (ENSDLEG00000003745) #26	MED25 (ENSDLEG00000003671) #27	PTOV1 (ENSDLEG00000003560) #28	PNKP (ENSDLEG00000003526) #29	AKT1S1 (ENSDLEG00000003508) #30	TBC1D17 (ENSDLEG00000003382) #31	IL4I1 (ENSDLEG00000003333) #32
Dolphin	MODERN SPECIES	3246	SLC17A7 (ENSTTRG00000005430) #7	PIH1D1 (ENSTTRG00000005448) #8	ALDH16A1 (ENSTTRG00000005455) #9	FLT3LG (ENSTTRG00000005474) #10	ENSTTRG00000005485 ##11	RPS11 (ENSTTRG00000005495) ##12	FCGRT (ENSTTRG00000005500) #13	RCN3 (ENSTTRG00000005508) #14	NOSIP (ENSTTRG00000005514) #15	PRRG2 (ENSTTRG00000005516) #16	ENSTTRG00000005519 #17	RRAS (ENSTTRG00000005524) #18	SCAF1 (ENSTTRG00000005527) #19	IRF3 (ENSTTRG00000005531) #20	BCL2L12 (ENSTTRG00000005533) #21	PRMT1 (ENSTTRG00000005537) #22	CPT1C (ENSTTRG00000005539) #23	TSKS (ENSTTRG00000005542) #24	AP2A1 (ENSTTRG00000005545) #25	FUZ (ENSTTRG00000005547) #26
Sperm whale	MODERN SPECIES	8	CCER2 (ENSPCTG00005009554)	NFKBIB (ENSPCTG00005009602)	SIRT2 (ENSPCTG00005009688)	RINL (ENSPCTG00005009967)	HNRNPL (ENSPCTG00005010149)	ECH1 (ENSPCTG00005010195)	LGALS4 (ENSPCTG00005010249)	LGALS7B (ENSPCTG00005010368)	ENSPCTG00005010400	PRR12 (ENSPCTG00005010439) #17	RRAS (ENSPCTG00005010605) #18	ENSPCTG00005010658 #19	ENSPCTG00005010678 #19	IRF3 (ENSPCTG00005010716) #20	BCL2L12 (ENSPCTG00005010802) #21	PRMT1 (ENSPCTG00005010926) #22	ADM5 (ENSPCTG00005011058)	CPT1C (ENSPCTG00005011091) #23	TSKS (ENSPCTG00005011160) #24	ENSPCTG00005011263 #25	ENSPCTG00005011339	PPFIA3 (ENSPCTG00005011438)	LIN7B (ENSPCTG00005012071)	SNRNP70 (ENSPCTG00005009001)	KCNA7 (ENSPCTG00005009040)	KCNA7 (ENSPCTG00005009073)	ENSPCTG00005009089	RUVBL2 (ENSPCTG00005009123)	GYS1 (ENSPCTG00005009316)	BAX (ENSPCTG00005009439)	ENSPCTG00005009590
Blue whale	MODERN SPECIES	10	GFY (ENSBMSG00010014599)	SLC17A7 (ENSBMSG00010014462) #7	PIH1D1 (ENSBMSG00010014378) #8	ALDH16A1 (ENSBMSG00010014229) #9	FLT3LG (ENSBMSG00010014045) #10	ENSBMSG00010021476 ##11	RPS11 (ENSBMSG00010021462) ##12	FCGRT (ENSBMSG00010021425) #13	RCN3 (ENSBMSG00010021418) #14	NOSIP (ENSBMSG00010021409) #15	PRRG2 (ENSBMSG00010021396) #16	PRR12 (ENSBMSG00010021379) #17	RRAS (ENSBMSG00010021366) #18	SCAF1 (ENSBMSG00010021355) #19	IRF3 (ENSBMSG00010021347) #20	PRMT1 (ENSBMSG00010021258) #22	ENSBMSG00010021213	CPT1C (ENSBMSG00010021196) #23	TSKS (ENSBMSG00010021176) #24	AP2A1 (ENSBMSG00010021155) #25	FUZ (ENSBMSG00010021113) #26	MED25 (ENSBMSG00010021075) #27	PTOV1 (ENSBMSG00010021043) #28	PNKP (ENSBMSG00010021012) #29	AKT1S1 (ENSBMSG00010020985) #30	TBC1D17 (ENSBMSG00010020938) #31	IL4I1 (ENSBMSG00010020882) #32	NUP62 (ENSBMSG00010020840) #33	ATF5 (ENSBMSG00010020834) #34	VRK3 (ENSBMSG00010020803) #36	ZNF473 (ENSBMSG00010020773) #37
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	353	ENSMMSG00000009400	ENSMMSG00000009441	SP140 (ENSMMSG00000009514)	ENSMMSG00000009672	ENSMMSG00000009643	CAB39 (ENSMMSG00000009724)	ITM2C (ENSMMSG00000009765)	GPR55 (ENSMMSG00000009994)	ENSMMSG00000010028	C2orf72 (ENSMMSG00000010077)	ENSMMSG00000010102	PSMD1 (ENSMMSG00000010125)	HTR2B (ENSMMSG00000010245)	ARMC9 (ENSMMSG00000010272)	B3GNT7 (ENSMMSG00000010494)	ENSMMSG00000010521 #22	ENSMMSG00000010637	NMUR1 (ENSMMSG00000010684)	ENSMMSG00000010724	PDE6D (ENSMMSG00000010813)	COPS7B (ENSMMSG00000010858)	ENSMMSG00000010908	NPPC (ENSMMSG00000010923)	DIS3L2 (ENSMMSG00000010947)	ENSMMSG00000011007	ENSMMSG00000011032	ENSMMSG00000011054	ENSMMSG00000011102	ENSMMSG00000011117	ENSMMSG00000011160	ENSMMSG00000011207
Siberian musk deer	MODERN SPECIES	124	PIH1D1 (ENSMMSG00000003162) #8	ALDH16A1 (ENSMMSG00000003049) #9	ENSMMSG00000002991 #10	ENSMMSG00000002918 ##11	ENSMMSG00000002892 ##12	ENSMMSG00000002876 #18	FCGRT (ENSMMSG00000002863) #13	RCN3 (ENSMMSG00000002846) #14	NOSIP (ENSMMSG00000002827) #15	PRRG2 (ENSMMSG00000002800) #16	PRR12 (ENSMMSG00000002678) #17	RRAS (ENSMMSG00000002634) #18	SCAF1 (ENSMMSG00000002608) #19	IRF3 (ENSMMSG00000002560) #20	BCL2L12 (ENSMMSG00000002524) #21	ENSMMSG00000002440 #22	ENSMMSG00000002408	CPT1C (ENSMMSG00000002363) #23	TSKS (ENSMMSG00000002323) #24	AP2A1 (ENSMMSG00000002265) #25	FUZ (ENSMMSG00000002233) #26	MED25 (ENSMMSG00000002159) #27	PTOV1 (ENSMMSG00000002088) #28	PNKP (ENSMMSG00000002008) #29	AKT1S1 (ENSMMSG00000001973) #30	TBC1D17 (ENSMMSG00000001847) #31	IL4I1 (ENSMMSG00000001798) #32	NUP62 (ENSMMSG00000001784) #33	ATF5 (ENSMMSG00000001770) #34	ENSMMSG00000001743 #35	VRK3 (ENSMMSG00000001666) #36
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i.b ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Goat	DUPLICATION
Goat	MODERN SPECIES	9	PIH1D1 (ENSCHIG00000025674) #8	ALDH16A1 (ENSCHIG00000022106) #9	FLT3LG (ENSCHIG00000013222) #10	ENSCHIG00000021732 ##11	RPS11 (ENSCHIG00000027213) ##12	FCGRT (ENSCHIG00000024609) #13	RCN3 (ENSCHIG00000010966) #14	NOSIP (ENSCHIG00000024881) #15	PRRG2 (ENSCHIG00000023430) #16	ENSCHIG00000027043 #17	ENSCHIG00000012558 #17	RRAS (ENSCHIG00000025071) #18	SCAF1 (ENSCHIG00000019580) #19	IRF3 (ENSCHIG00000017942) #20	BCL2L12 (ENSCHIG00000014818) #21	PRMT1 (ENSCHIG00000014997) #22	ENSCHIG00000016069	CPT1C (ENSCHIG00000025275) #23	TSKS (ENSCHIG00000018371) #24	AP2A1 (ENSCHIG00000025129) #25	FUZ (ENSCHIG00000021495) #26	MED25 (ENSCHIG00000008085) #27	PTOV1 (ENSCHIG00000009929) #28	PNKP (ENSCHIG00000023637) #29	AKT1S1 (ENSCHIG00000026415) #30	TBC1D17 (ENSCHIG00000020513) #31	IL4I1 (ENSCHIG00000014204) #32	NUP62 (ENSCHIG00000012083) #33	ATF5 (ENSCHIG00000017188) #34	VRK3 (ENSCHIG00000017552) #36	ZNF473 (ENSCHIG00000009646) #37
Goat	MODERN SPECIES	11	SP110 (ENSCHIG00000013385)	ENSCHIG00000023219	ENSCHIG00000011406	ENSCHIG00000023550	ENSCHIG00000016805	CAB39 (ENSCHIG00000024432)	ITM2C (ENSCHIG00000019713)	GPR55 (ENSCHIG00000016307)	SPATA3 (ENSCHIG00000024389)	C2orf72 (ENSCHIG00000014816)	HTR2B (ENSCHIG00000026300)	ENSCHIG00000018038	PSMD1 (ENSCHIG00000017071)	ARMC9 (ENSCHIG00000013895)	B3GNT7 (ENSCHIG00000024123)	ENSCHIG00000017014 #22	ENSCHIG00000010894	NMUR1 (ENSCHIG00000022412)	PDE6D (ENSCHIG00000008236)	COPS7B (ENSCHIG00000009807)	NPPC (ENSCHIG00000021412)	ENSCHIG00000013797	DIS3L2 (ENSCHIG00000022192)	ENSCHIG00000012063	ENSCHIG00000025249	ENSCHIG00000025753	ENSCHIG00000024942	ENSCHIG00000020345	ENSCHIG00000009791	ECEL1 (ENSCHIG00000008360)	PRSS56 (ENSCHIG00000006707)
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	5	SLC17A7 (ENSOARG00020022623) #7	PIH1D1 (ENSOARG00020022711) #8	ALDH16A1 (ENSOARG00020022768) #9	FLT3LG (ENSOARG00020022954) #10	ENSOARG00020022981 ##11	RPS11 (ENSOARG00020009205) ##12	FCGRT (ENSOARG00020009245) #13	RCN3 (ENSOARG00020009363) #14	NOSIP (ENSOARG00020009405) #15	PRRG2 (ENSOARG00020009444) #16	PRR12 (ENSOARG00020009487) #17	RRAS (ENSOARG00020009655) #18	SCAF1 (ENSOARG00020009687) #19	IRF3 (ENSOARG00020009726) #20	BCL2L12 (ENSOARG00020009833) #21	PRMT1 (ENSOARG00020009967) #22	ENSOARG00020010309	CPT1C (ENSOARG00020010351) #23	TSKS (ENSOARG00020010412) #24	AP2A1 (ENSOARG00020010527) #25	FUZ (ENSOARG00020010715) #26	MED25 (ENSOARG00020010912) #27	PTOV1 (ENSOARG00020011240) #28	PNKP (ENSOARG00020011554) #29	AKT1S1 (ENSOARG00020011932) #30	TBC1D17 (ENSOARG00020012020) #31	IL4I1 (ENSOARG00020012301) #32	NUP62 (ENSOARG00020012515) #33	ATF5 (ENSOARG00020012533) #34	ENSOARG00020012572 #35	VRK3 (ENSOARG00020012729) #36
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020009265	ENSOARG00020009400	ENSOARG00020009482	ENSOARG00020009511	ENSOARG00020009545	CAB39 (ENSOARG00020009580)	ITM2C (ENSOARG00020009671)	GPR55 (ENSOARG00020010161)	SPATA3 (ENSOARG00020010184)	C2orf72 (ENSOARG00020010235)	PSMD1 (ENSOARG00020010355)	HTR2B (ENSOARG00020010696)	ENSOARG00020010779	ARMC9 (ENSOARG00020010823)	B3GNT7 (ENSOARG00020011135)	ENSOARG00020011186 #22	ENSOARG00020011332	NMUR1 (ENSOARG00020011405)	PTMA (ENSOARG00020011440)	PDE6D (ENSOARG00020011528)	COPS7B (ENSOARG00020011620)	NPPC (ENSOARG00020011896)	DIS3L2 (ENSOARG00020011931)	ENSOARG00020012043	ENSOARG00020012112	ENSOARG00020012262	ENSOARG00020012579	ENSOARG00020015111	ENSOARG00020015541	ENSOARG00020016422	ECEL1 (ENSOARG00020016557)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
American bison	MODERN SPECIES	3201	PTH2 (ENSBBBG00000010316)	GFY (ENSBBBG00000010311)	SLC17A7 (ENSBBBG00000001775) #7	ALDH16A1 (ENSBBBG00000008431) #9	FLT3LG (ENSBBBG00000000042) #10	ENSBBBG00000000077 ##11	RPS11 (ENSBBBG00000000112) ##12	FCGRT (ENSBBBG00000000126) #13	RCN3 (ENSBBBG00000000135) #14	ENSBBBG00000007115 #15	PRRG2 (ENSBBBG00000001739) #16	PRR12 (ENSBBBG00000010246) #17	ENSBBBG00000001733 #19	ENSBBBG00000010184 #20	BCL2L12 (ENSBBBG00000010166) #21	PRMT1 (ENSBBBG00000010142) #22	ENSBBBG00000010104	CPT1C (ENSBBBG00000010097) #23	TSKS (ENSBBBG00000010082) #24	AP2A1 (ENSBBBG00000010075) #25	FUZ (ENSBBBG00000010049) #26	MED25 (ENSBBBG00000010023) #27	PTOV1 (ENSBBBG00000010000) #28	PNKP (ENSBBBG00000009989) #29	TBC1D17 (ENSBBBG00000009959) #31	IL4I1 (ENSBBBG00000009938) #32	NUP62 (ENSBBBG00000009933) #33	ATF5 (ENSBBBG00000009930) #34	ENSBBBG00000009909 #35	VRK3 (ENSBBBG00000009862) #36	ENSBBBG00000009834 #37
Bos	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.h.b #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Bos_b	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.h.b #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Cow	MODERN SPECIES	9	PIH1D1 (ENSBTAG00000016526) #8	ALDH16A1 (ENSBTAG00000000330) #9	FLT3LG (ENSBTAG00000038045) #10	RPL13A (ENSBTAG00000005296) ##11	RPS11 (ENSBTAG00000013924) ##12	FCGRT (ENSBTAG00000013926) #13	RCN3 (ENSBTAG00000021799) #14	NOSIP (ENSBTAG00000014450) #15	PRRG2 (ENSBTAG00000030563) #16	PRR12 (ENSBTAG00000014454) #17	ENSBTAG00000049577 #17	RRAS (ENSBTAG00000020983) #18	SCAF1 (ENSBTAG00000006612) #19	IRF3 (ENSBTAG00000006633) #20	BCL2L12 (ENSBTAG00000006638) #21	PRMT1 (ENSBTAG00000006646) #22	ENSBTAG00000049114	CPT1C (ENSBTAG00000012205) #23	TSKS (ENSBTAG00000019179) #24	AP2A1 (ENSBTAG00000019180) #25	FUZ (ENSBTAG00000019183) #26	MED25 (ENSBTAG00000008518) #27	PTOV1 (ENSBTAG00000030578) #28	PNKP (ENSBTAG00000001834) #29	AKT1S1 (ENSBTAG00000005763) #30	TBC1D17 (ENSBTAG00000047035) #31	IL4I1 (ENSBTAG00000005766) #32	NUP62 (ENSBTAG00000050948) #33	ATF5 (ENSBTAG00000003457) #34	ENSBTAG00000016997 #35	VRK3 (ENSBTAG00000005367) #36
Hybrid Bos Indicus	MODERN SPECIES	9	SLC17A7 (ENSBIXG00005027991) #7	PIH1D1 (ENSBIXG00005028016) #8	ALDH16A1 (ENSBIXG00005028107) #9	FLT3LG (ENSBIXG00005028193) #10	ENSBIXG00005028251 ##11	RPS11 (ENSBIXG00005028282) ##12	FCGRT (ENSBIXG00005004878) #13	RCN3 (ENSBIXG00005028407) #14	NOSIP (ENSBIXG00005028444) #15	PRRG2 (ENSBIXG00005028454) #16	PRR12 (ENSBIXG00005028496) #17	RRAS (ENSBIXG00005028511) #18	SCAF1 (ENSBIXG00005028526) #19	IRF3 (ENSBIXG00005006544) #20	BCL2L12 (ENSBIXG00005028650) #21	PRMT1 (ENSBIXG00005028768) #22	CPT1C (ENSBIXG00005028794) #23	TSKS (ENSBIXG00005005006) #24	AP2A1 (ENSBIXG00005028858) #25	FUZ (ENSBIXG00005005035) #26	MED25 (ENSBIXG00005029006) #27	PNKP (ENSBIXG00005001965) #29	AKT1S1 (ENSBIXG00005029090) #30	TBC1D17 (ENSBIXG00005005183) #31	IL4I1 (ENSBIXG00005005205) #32	NUP62 (ENSBIXG00005001804) #33	ATF5 (ENSBIXG00005001786) #34	ENSBIXG00005001776 #35	VRK3 (ENSBIXG00005001640) #36	ENSBIXG00005001604 #37	ENSBIXG00005011925
Bos_a	ANCESTRAL SPECIES	16	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.h.b #19	ENSGT00950000183205.b.a.b.a.a.h.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Wild yak	MODERN SPECIES	1730	SLC17A7 (ENSBMUG00000003053) #7	PIH1D1 (ENSBMUG00000003075) #8	ALDH16A1 (ENSBMUG00000003395) #9	FLT3LG (ENSBMUG00000003574) #10	ENSBMUG00000003651 ##11	ENSBMUG00000003690	FCGRT (ENSBMUG00000003733) #13	RCN3 (ENSBMUG00000003756) #14	NOSIP (ENSBMUG00000003881) #15	PRRG2 (ENSBMUG00000003914) #16	PRR12 (ENSBMUG00000003983) #17	RRAS (ENSBMUG00000004017) #18	ENSBMUG00000004158 #19	IRF3 (ENSBMUG00000004245) #20	BCL2L12 (ENSBMUG00000004304) #21	PRMT1 (ENSBMUG00000004375) #22	ENSBMUG00000004408	CPT1C (ENSBMUG00000004440) #23	TSKS (ENSBMUG00000004483) #24	AP2A1 (ENSBMUG00000004532) #25	FUZ (ENSBMUG00000004591) #26	MED25 (ENSBMUG00000004720) #27	PTOV1 (ENSBMUG00000004841) #28	ENSBMUG00000004888 #29	ENSBMUG00000004900 #30	TBC1D17 (ENSBMUG00000005003) #31	NUP62 (ENSBMUG00000005054) #33	ATF5 (ENSBMUG00000005063) #34	ENSBMUG00000005072 #35	VRK3 (ENSBMUG00000005187) #36	ENSBMUG00000005224 #37
Domestic yak	MODERN SPECIES	12	FLT3LG (ENSBGRG00000014021) #10	ENSBGRG00000024407 ##11	ENSBGRG00000024351 ##12	FCGRT (ENSBGRG00000024262) #13	RCN3 (ENSBGRG00000024220) #14	ENSBGRG00000024196	NOSIP (ENSBGRG00000024116) #15	ENSBGRG00000024046 #16	ENSBGRG00000024015 #17	ENSBGRG00000023926 #17	RRAS (ENSBGRG00000023868) #18	ENSBGRG00000023836 #19	ENSBGRG00000023762 #19	IRF3 (ENSBGRG00000023684) #20	BCL2L12 (ENSBGRG00000023636) #21	PRMT1 (ENSBGRG00000023312) #22	ENSBGRG00000023243	CPT1C (ENSBGRG00000023169) #23	TSKS (ENSBGRG00000023079) #24	AP2A1 (ENSBGRG00000022434) #25	FUZ (ENSBGRG00000022030) #26	MED25 (ENSBGRG00000021696) #27	PTOV1 (ENSBGRG00000021493) #28	PNKP (ENSBGRG00000021234) #29	AKT1S1 (ENSBGRG00000021121) #30	TBC1D17 (ENSBGRG00000020970) #31	IL4I1 (ENSBGRG00000020877) #32	NUP62 (ENSBGRG00000020834) #33	ATF5 (ENSBGRG00000020773) #34	ENSBGRG00000020747 #35	VRK3 (ENSBGRG00000020286) #36
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	27	SLC17A7 (ENSCHYG00000002123) #7	PIH1D1 (ENSCHYG00000002157) #8	ALDH16A1 (ENSCHYG00000002223) #9	FLT3LG (ENSCHYG00000002465) #10	ENSCHYG00000002487 ##11	ENSCHYG00000002522	FCGRT (ENSCHYG00000002532) #13	RCN3 (ENSCHYG00000002553) #14	NOSIP (ENSCHYG00000002580) #15	PRRG2 (ENSCHYG00000002598) #16	PRR12 (ENSCHYG00000002616) #17	RRAS (ENSCHYG00000002642) #18	SCAF1 (ENSCHYG00000002660) #19	IRF3 (ENSCHYG00000002693) #20	BCL2L12 (ENSCHYG00000002735) #21	ENSCHYG00000002791 #22	ENSCHYG00000002874	CPT1C (ENSCHYG00000002891) #23	TSKS (ENSCHYG00000002916) #24	AP2A1 (ENSCHYG00000002955) #25	FUZ (ENSCHYG00000003042) #26	MED25 (ENSCHYG00000003152) #27	PTOV1 (ENSCHYG00000003241) #28	PNKP (ENSCHYG00000003327) #29	AKT1S1 (ENSCHYG00000003373) #30	TBC1D17 (ENSCHYG00000003408) #31	IL4I1 (ENSCHYG00000003457) #32	NUP62 (ENSCHYG00000003473) #33	ENSCHYG00000003487	ENSCHYG00000003506 #35	VRK3 (ENSCHYG00000003577) #36
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000011802	ENSCHYG00000011782	ENSCHYG00000011732	ENSCHYG00000011704	ENSCHYG00000011597	ENSCHYG00000011559	CAB39 (ENSCHYG00000011507)	ENSCHYG00000011164	GPR55 (ENSCHYG00000011133)	SPATA3 (ENSCHYG00000011102)	C2orf72 (ENSCHYG00000011056)	HTR2B (ENSCHYG00000011019)	PSMD1 (ENSCHYG00000010484)	ARMC9 (ENSCHYG00000009411)	B3GNT7 (ENSCHYG00000009299)	ENSCHYG00000009172 #22	ENSCHYG00000021122	NMUR1 (ENSCHYG00000021055)	PTMA (ENSCHYG00000020863)	PDE6D (ENSCHYG00000020773)	COPS7B (ENSCHYG00000020525)	NPPC (ENSCHYG00000020448)	DIS3L2 (ENSCHYG00000020131)	ENSCHYG00000020061	ENSCHYG00000020024	ENSCHYG00000019940	ECEL1 (ENSCHYG00000019662)	PRSS56 (ENSCHYG00000019425)	CHRND (ENSCHYG00000019299)	CHRNG (ENSCHYG00000019022)	EIF4E2 (ENSCHYG00000018635)
Suina	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n ##12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #27	ENSGT00940000161923 #28	ENSGT00940000159302 #29	ENSGT00390000017397 #30	ENSGT00940000158989 #31	ENSGT00940000162082 #32	ENSGT00940000161737 #33	ENSGT00530000063801.b #34	ENSGT01080000257333.A.a.b.a.a #35	ENSGT00940000158111 #36
Pig	MODERN SPECIES	14	SLC17A7 (ENSSSCG00000003170) #7	PIH1D1 (ENSSSCG00000003169) #8	ALDH16A1 (ENSSSCG00000003168) #9	FLT3LG (ENSSSCG00000034448) #10	ENSSSCG00000052671 ##11	RPS11 (ENSSSCG00000003165) ##12	FCGRT (ENSSSCG00000003187) #13	RCN3 (ENSSSCG00000024823) #14	NOSIP (ENSSSCG00000029154) #15	PRRG2 (ENSSSCG00000003161) #16	ENSSSCG00000032668 #17	RRAS (ENSSSCG00000003183) #18	SCAF1 (ENSSSCG00000038807) #19	IRF3 (ENSSSCG00000003178) #20	ENSSSCG00000003177	PRMT1 (ENSSSCG00000003189) #22	CPT1C (ENSSSCG00000024872) #23	TSKS (ENSSSCG00000003191) #24	AP2A1 (ENSSSCG00000003199) #25	FUZ (ENSSSCG00000003198) #26	MED25 (ENSSSCG00000003197) #27	PTOV1 (ENSSSCG00000003196) #28	PNKP (ENSSSCG00000003195) #29	AKT1S1 (ENSSSCG00000003194) #30	TBC1D17 (ENSSSCG00000003193) #31	IL4I1 (ENSSSCG00000003192) #32	NUP62 (ENSSSCG00000040333) #33	ATF5 (ENSSSCG00000003201) #34	VRK3 (ENSSSCG00000003204) #36	ZNF473 (ENSSSCG00000037710) #37	IZUMO2 (ENSSSCG00000003207)
Chacoan peccary	MODERN SPECIES	799	SLC17A7 (ENSCWAG00000005787) #7	PIH1D1 (ENSCWAG00000005886) #8	ALDH16A1 (ENSCWAG00000005930) #9	FLT3LG (ENSCWAG00000006205) #10	ENSCWAG00000006241 ##11	RPS11 (ENSCWAG00000006295) ##12	FCGRT (ENSCWAG00000006333) #13	RCN3 (ENSCWAG00000006394) #14	NOSIP (ENSCWAG00000006413) #15	PRRG2 (ENSCWAG00000006438) #16	PRR12 (ENSCWAG00000006486) #17	RRAS (ENSCWAG00000006558) #18	SCAF1 (ENSCWAG00000006581) #19	IRF3 (ENSCWAG00000006610) #20	BCL2L12 (ENSCWAG00000006662) #21	PRMT1 (ENSCWAG00000006728) #22	ADM5 (ENSCWAG00000006802)	CPT1C (ENSCWAG00000006842) #23	TSKS (ENSCWAG00000007022) #24	AP2A1 (ENSCWAG00000007063) #25	FUZ (ENSCWAG00000007131) #26	MED25 (ENSCWAG00000007240) #27	PTOV1 (ENSCWAG00000007356) #28