Muroidea	ANCESTRAL SPECIES	41	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048	ENSGT00390000015068
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Murinae	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus_B	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v.g #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus_C	ANCESTRAL SPECIES	13	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v.g #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Steppe mouse	MODERN SPECIES	2865	ENSMSIG00000020069 #7	Pih1d1 (ENSMSIG00000020099) #8	Aldh16a1 (ENSMSIG00000020116) #9	Flt3l (ENSMSIG00000020203) #10	ENSMSIG00000020261 #11	ENSMSIG00000020310 #12	Fcgrt (ENSMSIG00000020357) #13	Rcn3 (ENSMSIG00000020381) #14	Nosip (ENSMSIG00000020392) #15	Prrg2 (ENSMSIG00000020460) #16	Prr12 (ENSMSIG00000020493) #17	Rras (ENSMSIG00000020541) #18	Scaf1 (ENSMSIG00000020578) #19	Irf3 (ENSMSIG00000020627) #20	Bcl2l12 (ENSMSIG00000020678) #21	Prmt1 (ENSMSIG00000020718) #22	Cpt1c (ENSMSIG00000020889) #23	Tsks (ENSMSIG00000020920) #24	Ap2a1 (ENSMSIG00000020986) #25	Fuz (ENSMSIG00000021162) #26	ENSMSIG00000021217 #27	Med25 (ENSMSIG00000021224) #28	Ptov1 (ENSMSIG00000021311) #29	Pnkp (ENSMSIG00000021391) #30	Akt1s1 (ENSMSIG00000021526) #31	Tbc1d17 (ENSMSIG00000021563) #32	Il4i1 (ENSMSIG00000021614) #33	Nup62 (ENSMSIG00000021640) #34	Atf5 (ENSMSIG00000021644) #35
spretus	DUPLICATION
spretus	MODERN SPECIES	16	Pih1d1 (MGP_SPRETEiJ_G0030799) #8	Aldh16a1 (MGP_SPRETEiJ_G0030798) #9	MGP_SPRETEiJ_G0030797 #10	MGP_SPRETEiJ_G0030796 #11	Rps11 (MGP_SPRETEiJ_G0030795) #12	Fcgrt (MGP_SPRETEiJ_G0030794) #13	Rcn3 (MGP_SPRETEiJ_G0030793) #14	Nosip (MGP_SPRETEiJ_G0030792) #15	Prrg2 (MGP_SPRETEiJ_G0030791) #16	Prr12 (MGP_SPRETEiJ_G0030790) #17	Rras (MGP_SPRETEiJ_G0030789) #18	Scaf1 (MGP_SPRETEiJ_G0030788) #19	Irf3 (MGP_SPRETEiJ_G0030787) #20	Bcl2l12 (MGP_SPRETEiJ_G0030786) #21	MGP_SPRETEiJ_G0030785 #22	MGP_SPRETEiJ_G0030784 #22	Cpt1c (MGP_SPRETEiJ_G0030783) #23	MGP_SPRETEiJ_G0030782 #24	Fuz (MGP_SPRETEiJ_G0030781) #26	Ap2a1 (MGP_SPRETEiJ_G0030780) #25	Med25 (MGP_SPRETEiJ_G0030779) #28	Ptov1 (MGP_SPRETEiJ_G0030778) #29	Pnkp (MGP_SPRETEiJ_G0030777) #30	Akt1s1 (MGP_SPRETEiJ_G0030776) #31	Tbc1d17 (MGP_SPRETEiJ_G0030775) #32	Il4i1 (MGP_SPRETEiJ_G0030774) #33	Atf5 (MGP_SPRETEiJ_G0030773) #35	Vrk3 (MGP_SPRETEiJ_G0030772)	Zfp473 (MGP_SPRETEiJ_G0030771)	Izumo2 (MGP_SPRETEiJ_G0030770)	MGP_SPRETEiJ_G0030769
spretus	MODERN SPECIES	16	Slc17a7 (MGP_SPRETEiJ_G0030800) #7	Pih1d1 (MGP_SPRETEiJ_G0030799) #8	Aldh16a1 (MGP_SPRETEiJ_G0030798) #9	MGP_SPRETEiJ_G0030797 #10	MGP_SPRETEiJ_G0030796 #11	Rps11 (MGP_SPRETEiJ_G0030795) #12	Fcgrt (MGP_SPRETEiJ_G0030794) #13	Rcn3 (MGP_SPRETEiJ_G0030793) #14	Nosip (MGP_SPRETEiJ_G0030792) #15	Prrg2 (MGP_SPRETEiJ_G0030791) #16	Prr12 (MGP_SPRETEiJ_G0030790) #17	Rras (MGP_SPRETEiJ_G0030789) #18	Scaf1 (MGP_SPRETEiJ_G0030788) #19	Irf3 (MGP_SPRETEiJ_G0030787) #20	Bcl2l12 (MGP_SPRETEiJ_G0030786) #21	MGP_SPRETEiJ_G0030785 #22	MGP_SPRETEiJ_G0030784 #22	Cpt1c (MGP_SPRETEiJ_G0030783) #23	MGP_SPRETEiJ_G0030782 #24	Fuz (MGP_SPRETEiJ_G0030781) #26	Ap2a1 (MGP_SPRETEiJ_G0030780) #25	Med25 (MGP_SPRETEiJ_G0030779) #28	Ptov1 (MGP_SPRETEiJ_G0030778) #29	Pnkp (MGP_SPRETEiJ_G0030777) #30	Akt1s1 (MGP_SPRETEiJ_G0030776) #31	Tbc1d17 (MGP_SPRETEiJ_G0030775) #32	Il4i1 (MGP_SPRETEiJ_G0030774) #33	Atf5 (MGP_SPRETEiJ_G0030773) #35	Vrk3 (MGP_SPRETEiJ_G0030772)	Zfp473 (MGP_SPRETEiJ_G0030771)	Izumo2 (MGP_SPRETEiJ_G0030770)
Mouse	MODERN SPECIES	16	Pih1d1 (ENSMUSG00000003423) #8	Aldh16a1 (ENSMUSG00000007833) #9	Flt3l (ENSMUSG00000110206) #10	Gm45713 (ENSMUSG00000089989)	Rpl13a (ENSMUSG00000074129) ##11	Rps11 (ENSMUSG00000003429) #12	Fcgrt (ENSMUSG00000003420) #13	Rcn3 (ENSMUSG00000019539) #14	Nosip (ENSMUSG00000003421) #15	Prrg2 (ENSMUSG00000007837) #16	Prr12 (ENSMUSG00000046574) #17	Rras (ENSMUSG00000038387) #18	Scaf1 (ENSMUSG00000038406) #19	Irf3 (ENSMUSG00000003184) #20	Bcl2l12 (ENSMUSG00000003190) #21	Prmt1 (ENSMUSG00000109324) #22	Cpt1c (ENSMUSG00000007783) #23	Tsks (ENSMUSG00000059891) #24	Ap2a1 (ENSMUSG00000060279) #25	Fuz (ENSMUSG00000011658) #26	Med25 (ENSMUSG00000002968) #28	Ptov1 (ENSMUSG00000038502) #29	Pnkp (ENSMUSG00000002963) #30	Akt1s1 (ENSMUSG00000011096) #31	Tbc1d17 (ENSMUSG00000038520) #32	Il4i1 (ENSMUSG00000074141) #33	Nup62 (ENSMUSG00000109511) #34	Atf5 (ENSMUSG00000038539) #35	Vrk3 (ENSMUSG00000002205)	Zfp473 (ENSMUSG00000048012)	Izumo2 (ENSMUSG00000066500)
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES	16	Pih1d1 (MGP_CAROLIEiJ_G0029701) #8	Aldh16a1 (MGP_CAROLIEiJ_G0029700) #9	MGP_CAROLIEiJ_G0029699 #10	Rpl13a (MGP_CAROLIEiJ_G0029698) #11	Rps11 (MGP_CAROLIEiJ_G0029697) #12	Fcgrt (MGP_CAROLIEiJ_G0029696) #13	Rcn3 (MGP_CAROLIEiJ_G0029695) #14	Nosip (MGP_CAROLIEiJ_G0029694) #15	Prrg2 (MGP_CAROLIEiJ_G0029693) #16	Prr12 (MGP_CAROLIEiJ_G0029692) #17	Rras (MGP_CAROLIEiJ_G0029691) #18	Scaf1 (MGP_CAROLIEiJ_G0029690) #19	Irf3 (MGP_CAROLIEiJ_G0029689) #20	Bcl2l12 (MGP_CAROLIEiJ_G0029688) #21	MGP_CAROLIEiJ_G0029687 #22	MGP_CAROLIEiJ_G0029686 #22	Cpt1c (MGP_CAROLIEiJ_G0029685) #23	Tsks (MGP_CAROLIEiJ_G0029684) #24	Ap2a1 (MGP_CAROLIEiJ_G0029683) #25	Fuz (MGP_CAROLIEiJ_G0029682) #26	Med25 (MGP_CAROLIEiJ_G0029681) #28	Ptov1 (MGP_CAROLIEiJ_G0029680) #29	Pnkp (MGP_CAROLIEiJ_G0029679) #30	Akt1s1 (MGP_CAROLIEiJ_G0029678) #31	Tbc1d17 (MGP_CAROLIEiJ_G0029677) #32	Il4i1 (MGP_CAROLIEiJ_G0029676) #33	Atf5 (MGP_CAROLIEiJ_G0029675) #35	Vrk3 (MGP_CAROLIEiJ_G0029674)	Zfp473 (MGP_CAROLIEiJ_G0029673)	Izumo2 (MGP_CAROLIEiJ_G0029672)	MGP_CAROLIEiJ_G0029671
Ryukyu mouse	MODERN SPECIES	16	Slc17a7 (MGP_CAROLIEiJ_G0029702) #7	Pih1d1 (MGP_CAROLIEiJ_G0029701) #8	Aldh16a1 (MGP_CAROLIEiJ_G0029700) #9	MGP_CAROLIEiJ_G0029699 #10	Rpl13a (MGP_CAROLIEiJ_G0029698) #11	Rps11 (MGP_CAROLIEiJ_G0029697) #12	Fcgrt (MGP_CAROLIEiJ_G0029696) #13	Rcn3 (MGP_CAROLIEiJ_G0029695) #14	Nosip (MGP_CAROLIEiJ_G0029694) #15	Prrg2 (MGP_CAROLIEiJ_G0029693) #16	Prr12 (MGP_CAROLIEiJ_G0029692) #17	Rras (MGP_CAROLIEiJ_G0029691) #18	Scaf1 (MGP_CAROLIEiJ_G0029690) #19	Irf3 (MGP_CAROLIEiJ_G0029689) #20	Bcl2l12 (MGP_CAROLIEiJ_G0029688) #21	MGP_CAROLIEiJ_G0029687 #22	MGP_CAROLIEiJ_G0029686 #22	Cpt1c (MGP_CAROLIEiJ_G0029685) #23	Tsks (MGP_CAROLIEiJ_G0029684) #24	Ap2a1 (MGP_CAROLIEiJ_G0029683) #25	Fuz (MGP_CAROLIEiJ_G0029682) #26	Med25 (MGP_CAROLIEiJ_G0029681) #28	Ptov1 (MGP_CAROLIEiJ_G0029680) #29	Pnkp (MGP_CAROLIEiJ_G0029679) #30	Akt1s1 (MGP_CAROLIEiJ_G0029678) #31	Tbc1d17 (MGP_CAROLIEiJ_G0029677) #32	Il4i1 (MGP_CAROLIEiJ_G0029676) #33	Atf5 (MGP_CAROLIEiJ_G0029675) #35	Vrk3 (MGP_CAROLIEiJ_G0029674)	Zfp473 (MGP_CAROLIEiJ_G0029673)	Izumo2 (MGP_CAROLIEiJ_G0029672)
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES		Pih1d1 (MGP_PahariEiJ_G0012926) #8	Aldh16a1 (MGP_PahariEiJ_G0012925) #9	MGP_PahariEiJ_G0012924 #10	Rpl13a (MGP_PahariEiJ_G0012923) #11	Rps11 (MGP_PahariEiJ_G0012922) #12	Fcgrt (MGP_PahariEiJ_G0012921) #13	Rcn3 (MGP_PahariEiJ_G0012920) #14	Nosip (MGP_PahariEiJ_G0012919) #15	Prrg2 (MGP_PahariEiJ_G0012918) #16	Prr12 (MGP_PahariEiJ_G0012917) #17	Rras (MGP_PahariEiJ_G0012916) #18	Scaf1 (MGP_PahariEiJ_G0012915) #19	Irf3 (MGP_PahariEiJ_G0012914) #20	Bcl2l12 (MGP_PahariEiJ_G0012913) #21	MGP_PahariEiJ_G0012912 #22	MGP_PahariEiJ_G0012911 #22	Cpt1c (MGP_PahariEiJ_G0012910) #23	Tsks (MGP_PahariEiJ_G0012909) #24	Ap2a1 (MGP_PahariEiJ_G0012908) #25	Fuz (MGP_PahariEiJ_G0012907) #26	Med25 (MGP_PahariEiJ_G0012906) #28	Ptov1 (MGP_PahariEiJ_G0012905) #29	Pnkp (MGP_PahariEiJ_G0012904) #30	Akt1s1 (MGP_PahariEiJ_G0012903) #31	Tbc1d17 (MGP_PahariEiJ_G0012902) #32	Il4i1 (MGP_PahariEiJ_G0012901) #33	Atf5 (MGP_PahariEiJ_G0012900) #35	Vrk3 (MGP_PahariEiJ_G0012899)	MGP_PahariEiJ_G0012898	Izumo2 (MGP_PahariEiJ_G0012897)	MGP_PahariEiJ_G0012896
Shrew mouse	MODERN SPECIES		Slc17a7 (MGP_PahariEiJ_G0012927) #7	Pih1d1 (MGP_PahariEiJ_G0012926) #8	Aldh16a1 (MGP_PahariEiJ_G0012925) #9	MGP_PahariEiJ_G0012924 #10	Rpl13a (MGP_PahariEiJ_G0012923) #11	Rps11 (MGP_PahariEiJ_G0012922) #12	Fcgrt (MGP_PahariEiJ_G0012921) #13	Rcn3 (MGP_PahariEiJ_G0012920) #14	Nosip (MGP_PahariEiJ_G0012919) #15	Prrg2 (MGP_PahariEiJ_G0012918) #16	Prr12 (MGP_PahariEiJ_G0012917) #17	Rras (MGP_PahariEiJ_G0012916) #18	Scaf1 (MGP_PahariEiJ_G0012915) #19	Irf3 (MGP_PahariEiJ_G0012914) #20	Bcl2l12 (MGP_PahariEiJ_G0012913) #21	MGP_PahariEiJ_G0012912 #22	MGP_PahariEiJ_G0012911 #22	Cpt1c (MGP_PahariEiJ_G0012910) #23	Tsks (MGP_PahariEiJ_G0012909) #24	Ap2a1 (MGP_PahariEiJ_G0012908) #25	Fuz (MGP_PahariEiJ_G0012907) #26	Med25 (MGP_PahariEiJ_G0012906) #28	Ptov1 (MGP_PahariEiJ_G0012905) #29	Pnkp (MGP_PahariEiJ_G0012904) #30	Akt1s1 (MGP_PahariEiJ_G0012903) #31	Tbc1d17 (MGP_PahariEiJ_G0012902) #32	Il4i1 (MGP_PahariEiJ_G0012901) #33	Atf5 (MGP_PahariEiJ_G0012900) #35	Vrk3 (MGP_PahariEiJ_G0012899)	MGP_PahariEiJ_G0012898	Izumo2 (MGP_PahariEiJ_G0012897)
Rat	DUPLICATION
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES	5	ENSRNOG00000070133	AABR07016566.1 (ENSRNOG00000051648)	Actr2 (ENSRNOG00000004959)	Spred2 (ENSRNOG00000004888)	Meis1 (ENSRNOG00000004606)	Etaa1l1 (ENSRNOG00000006185)	Hnrnpk-ps1 (ENSRNOG00000063529)	C1d (ENSRNOG00000005982)	Pno1 (ENSRNOG00000005524)	Cnrip1 (ENSRNOG00000005326)	Plek (ENSRNOG00000005214)	Fbxo48 (ENSRNOG00000023026)	Egfr (ENSRNOG00000004332)	Sec61g (ENSRNOG00000005203)	Vstm2a (ENSRNOG00000005180)	LOC100361025 (ENSRNOG00000004090) #22	Cobl (ENSRNOG00000004281)	Grb10 (ENSRNOG00000004290)	Ddc (ENSRNOG00000004327)	Fignl1 (ENSRNOG00000004440)	Ikzf1 (ENSRNOG00000004444)	Spata48 (ENSRNOG00000037621)	Zpbp (ENSRNOG00000027801)	Vwc2 (ENSRNOG00000049076)	LOC498414 (ENSRNOG00000030665)	LOC685655 (ENSRNOG00000069782)	ENSRNOG00000067374	Abca13 (ENSRNOG00000025645)	Upp1 (ENSRNOG00000004972)	LOC688553 (ENSRNOG00000037632)	Sun3 (ENSRNOG00000005105)
Rat	MODERN SPECIES	19	C9h6orf141 (ENSRNOG00000048967)	Cyp2ac1 (ENSRNOG00000048329)	Rhag (ENSRNOG00000050121)	Crisp2 (ENSRNOG00000013225)	ENSRNOG00000068915	LOC102553880 (ENSRNOG00000039663)	LOC108351994 (ENSRNOG00000063860)	ENSRNOG00000066672	Crisp3 (ENSRNOG00000013496)	Pgk2 (ENSRNOG00000013600)	ENSRNOG00000066520	Crisp1 (ENSRNOG00000013612)	Defb49 (ENSRNOG00000039651)	Defb18 (ENSRNOG00000039650)	Defb16 (ENSRNOG00000066154)	ENSRNOG00000069864 #22	ENSRNOG00000064433	Tfap2d (ENSRNOG00000011642)	Tfap2b (ENSRNOG00000011823)	Pkhd1 (ENSRNOG00000058742)	Il17a (ENSRNOG00000012467)	Il17f (ENSRNOG00000012509)	Mcm3 (ENSRNOG00000012543)	Paqr8 (ENSRNOG00000067120)	Efhc1 (ENSRNOG00000042729)	Tram2 (ENSRNOG00000013046)	RGD1562107 (ENSRNOG00000024755)	Tmem14a (ENSRNOG00000013238)	Gsta3 (ENSRNOG00000056847)	ENSRNOG00000064063	Gsta1 (ENSRNOG00000013484)
Rat	MODERN SPECIES		Gfy (ENSRNOG00000047401)	Slc17a7 (ENSRNOG00000020650) #7	Pih1d1 (ENSRNOG00000020634) #8	Aldh16a1 (ENSRNOG00000020623) #9	Rpl13a (ENSRNOG00000020618) #11	Rps11 (ENSRNOG00000020595) #12	Fcgrt (ENSRNOG00000020583) #13	Rcn3 (ENSRNOG00000043007) #14	Nosip (ENSRNOG00000020543) #15	Prrg2 (ENSRNOG00000020517) #16	Prr12 (ENSRNOG00000059408) #17	Rras (ENSRNOG00000037247) #18	Scaf1 (ENSRNOG00000056946) #19	Irf3 (ENSRNOG00000043388) #20	Bcl2l12 (ENSRNOG00000020486) #21	Prmt1 (ENSRNOG00000026109) #22	Cpt1c (ENSRNOG00000026163) #23	Tsks (ENSRNOG00000020443) #24	Ap2a1 (ENSRNOG00000026243) #25	Fuz (ENSRNOG00000053084) #26	Med25 (ENSRNOG00000020363) #28	Ptov1 (ENSRNOG00000020358) #29	Pnkp (ENSRNOG00000020318) #30	Akt1s1 (ENSRNOG00000020289) #31	Tbc1d17 (ENSRNOG00000020191) #32	Atf5 (ENSRNOG00000020060) #35	Il4i1 (ENSRNOG00000020148) #33	Nup62 (ENSRNOG00000048733) #34	Vrk3 (ENSRNOG00000026517)	Zfp473 (ENSRNOG00000026572)	Izumo2 (ENSRNOG00000065701)
Rat	MODERN SPECIES	16	Efcab11 (ENSRNOG00000053317)	Foxn3 (ENSRNOG00000004709)	Cpg1 (ENSRNOG00000060278)	Ttc8 (ENSRNOG00000004542)	Eml5 (ENSRNOG00000004207)	Zc3h14 (ENSRNOG00000004083)	Ptpn21 (ENSRNOG00000060568)	Spata7 (ENSRNOG00000003955)	Kcnk10 (ENSRNOG00000003813)	Gpr65 (ENSRNOG00000065590)	Galc (ENSRNOG00000003759)	Flrt2 (ENSRNOG00000003732)	ENSRNOG00000066374	LOC103692684 (ENSRNOG00000070197)	AABR07065265.1 (ENSRNOG00000021751)	ENSRNOG00000066641 #22	ENSRNOG00000030420	AABR07065217.2 (ENSRNOG00000042542)	Sel1l (ENSRNOG00000004464)	Ston2 (ENSRNOG00000004458)	Gtf2a1 (ENSRNOG00000004300)	Tshr (ENSRNOG00000003972)	Cep128 (ENSRNOG00000003908)	Dio2 (ENSRNOG00000062383)	ENSRNOG00000063297	ENSRNOG00000062878	dsr-2 (ENSRNOG00000066815)	Nrxn3 (ENSRNOG00000047574)	Adck1 (ENSRNOG00000012685)	ENSRNOG00000062977	LOC100912568 (ENSRNOG00000069554)
Cricetidae	ANCESTRAL SPECIES	28	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Cricetinae	ANCESTRAL SPECIES	33	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048	ENSGT00390000015068
Golden Hamster	MODERN SPECIES	792	Kash5 (ENSMAUG00000020117)	Pth2 (ENSMAUG00000017781)	Gfy (ENSMAUG00000018963)	Slc17a7 (ENSMAUG00000000717) #7	Pih1d1 (ENSMAUG00000017490) #8	Aldh16a1 (ENSMAUG00000008671) #9	Flt3l (ENSMAUG00000012216) #10	Fcgrt (ENSMAUG00000013272) #13	Rcn3 (ENSMAUG00000012208) #14	Prrg2 (ENSMAUG00000012143) #16	Prr12 (ENSMAUG00000001460) #17	Rras (ENSMAUG00000022179) #18	Scaf1 (ENSMAUG00000019574) #19	Irf3 (ENSMAUG00000022168) #20	Bcl2l12 (ENSMAUG00000014186) #21	Prmt1 (ENSMAUG00000005917) #22	ENSMAUG00000015570 #23	Tsks (ENSMAUG00000001231) #24	Ap2a1 (ENSMAUG00000005134) #25	ENSMAUG00000004157 #26	Med25 (ENSMAUG00000010098) #28	Ptov1 (ENSMAUG00000014396) #29	Pnkp (ENSMAUG00000018809) #30	Akt1s1 (ENSMAUG00000018933) #31	ENSMAUG00000012091 #32	Il4i1 (ENSMAUG00000014929) #33	Nup62 (ENSMAUG00000019906) #34	Atf5 (ENSMAUG00000019941) #35	Vrk3 (ENSMAUG00000015093)	Zfp473 (ENSMAUG00000017471)	Izumo2 (ENSMAUG00000001423)
Chinese hamster chok1gshd	MODERN SPECIES	271	Slc17a7 (ENSCGRG00001007021) #7	Pih1d1 (ENSCGRG00001013397) #8	Aldh16a1 (ENSCGRG00001016532) #9	Flt3l (ENSCGRG00001017445) #10	ENSCGRG00001018651 #11	Rps11 (ENSCGRG00001023575) #12	Fcgrt (ENSCGRG00001000744) #13	Rcn3 (ENSCGRG00001003964) #14	Nosip (ENSCGRG00001013092) #15	Prrg2 (ENSCGRG00001014643) #16	Prr12 (ENSCGRG00001016597) #17	Rras (ENSCGRG00001019817) #18	Scaf1 (ENSCGRG00001021428) #19	Irf3 (ENSCGRG00001000404) #20	Bcl2l12 (ENSCGRG00001008963) #21	Prmt1 (ENSCGRG00001018188) #22	Cpt1c (ENSCGRG00001015931) #23	ENSCGRG00001019632	ENSCGRG00001022440 #24	Ap2a1 (ENSCGRG00001004014) #25	ENSCGRG00001002717	Fuz (ENSCGRG00001000345) #26	Med25 (ENSCGRG00001022723) #28	Ptov1 (ENSCGRG00001013179) #29	Pnkp (ENSCGRG00001019341) #30	Akt1s1 (ENSCGRG00001021290) #31	Tbc1d17 (ENSCGRG00001014714) #32	Il4i1 (ENSCGRG00001017543) #33	Nup62 (ENSCGRG00001016364) #34	Atf5 (ENSCGRG00001020961) #35	Vrk3 (ENSCGRG00001001410)
Cricetidae_B	ANCESTRAL SPECIES	31	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00390000015068
Northern American deer mouse	MODERN SPECIES		Slc17a7 (ENSPEMG00000018918) #7	Pih1d1 (ENSPEMG00000011439) #8	Aldh16a1 (ENSPEMG00000004925) #9	Flt3l (ENSPEMG00000012798) #10	Rpl13a (ENSPEMG00000009221) #11	Rps11 (ENSPEMG00000015976) #12	Fcgrt (ENSPEMG00000010129) #13	Rcn3 (ENSPEMG00000015947) #14	Nosip (ENSPEMG00000011136) #15	Prrg2 (ENSPEMG00000001303) #16	Prr12 (ENSPEMG00000010751) #17	Rras (ENSPEMG00000017709) #18	Scaf1 (ENSPEMG00000013288) #19	Irf3 (ENSPEMG00000010948) #20	Bcl2l12 (ENSPEMG00000017405) #21	Prmt1 (ENSPEMG00000014287) #22	Cpt1c (ENSPEMG00000013161) #23	Tsks (ENSPEMG00000012885) #24	Ap2a1 (ENSPEMG00000013224) #25	Fuz (ENSPEMG00000006496) #26	ENSPEMG00000024339 #27	Med25 (ENSPEMG00000009126) #28	Ptov1 (ENSPEMG00000030238) #29	Pnkp (ENSPEMG00000004786) #30	Akt1s1 (ENSPEMG00000010956) #31	Tbc1d17 (ENSPEMG00000010004) #32	Il4i1 (ENSPEMG00000006448) #33	Nup62 (ENSPEMG00000010597) #34	Atf5 (ENSPEMG00000029877) #35	Vrk3 (ENSPEMG00000013077)	Izumo2 (ENSPEMG00000008634)
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	97	Slc17a7 (ENSMOCG00000008964) #7	Pih1d1 (ENSMOCG00000017144) #8	Aldh16a1 (ENSMOCG00000005158) #9	Flt3l (ENSMOCG00000010342) #10	ENSMOCG00000002774 #11	Rps11 (ENSMOCG00000014469) #12	Fcgrt (ENSMOCG00000017574) #13	Rcn3 (ENSMOCG00000000557) #14	ENSMOCG00000002542 #15	Prrg2 (ENSMOCG00000003675) #16	Prr12 (ENSMOCG00000018369) #17	Rras (ENSMOCG00000002251) #18	Scaf1 (ENSMOCG00000012474) #19	Irf3 (ENSMOCG00000013920) #20	Bcl2l12 (ENSMOCG00000022863) #21	ENSMOCG00000004064 #22	Cpt1c (ENSMOCG00000001831) #23	Tsks (ENSMOCG00000012880) #24	Ap2a1 (ENSMOCG00000007825) #25	Fuz (ENSMOCG00000003081) #26	Med25 (ENSMOCG00000006863) #28	Ptov1 (ENSMOCG00000003051) #29	Pnkp (ENSMOCG00000006264) #30	Akt1s1 (ENSMOCG00000014526) #31	ENSMOCG00000020458 #32	Il4i1 (ENSMOCG00000009373) #33	ENSMOCG00000000871	Atf5 (ENSMOCG00000001321) #35	ENSMOCG00000003289	Vrk3 (ENSMOCG00000004276)	Izumo2 (ENSMOCG00000014130)
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	101	Wdr86 (ENSMOCG00000000597)	Crygn (ENSMOCG00000015061)	Rheb (ENSMOCG00000022240)	Prkag2 (ENSMOCG00000001286)	Galntl5 (ENSMOCG00000013714)	Galnt11 (ENSMOCG00000005276)	ENSMOCG00000001053	ENSMOCG00000020782	ENSMOCG00000016671	Actr3b (ENSMOCG00000004828)	Dpp6 (ENSMOCG00000000556)	Paxip1 (ENSMOCG00000013649)	Htr5a (ENSMOCG00000019605)	Insig1 (ENSMOCG00000020032)	En2 (ENSMOCG00000015841)	ENSMOCG00000019441 #22	ENSMOCG00000010240	Rbm33 (ENSMOCG00000021895)	Shh (ENSMOCG00000008843)	ENSMOCG00000013020	ENSMOCG00000018001	Rnf32 (ENSMOCG00000014460)	Lmbr1 (ENSMOCG00000008297)	ENSMOCG00000010734	Nom1 (ENSMOCG00000015962)	Mnx1 (ENSMOCG00000020173)	ENSMOCG00000002622	Ube3c (ENSMOCG00000018821)	ENSMOCG00000018590	ENSMOCG00000018608	ENSMOCG00000002213
Prairie vole	MODERN SPECIES	1	Zdhhc21 (ENSMOCG00000015320)	Nfib (ENSMOCG00000021986)	ENSMOCG00000020921	ENSMOCG00000018271	Lurap1l (ENSMOCG00000015966)	Tyrp1 (ENSMOCG00000015263)	ENSMOCG00000004135	Ptprd (ENSMOCG00000001990)	ENSMOCG00000015211	ENSMOCG00000012575	ENSMOCG00000013894	Frmd3 (ENSMOCG00000008934)	2310002L09Rik (ENSMOCG00000022037)	Rasef (ENSMOCG00000000943)	Tle1 (ENSMOCG00000017405)	ENSMOCG00000019378 #22	Megf9 (ENSMOCG00000018603)	E130308A19Rik (ENSMOCG00000014658)	Inip (ENSMOCG00000001218)	Snx30 (ENSMOCG00000000536)	Slc46a2 (ENSMOCG00000013061)	ENSMOCG00000004604	Zfp37 (ENSMOCG00000019734)	Slc31a2 (ENSMOCG00000013063)	Fkbp15 (ENSMOCG00000015155)	Slc31a1 (ENSMOCG00000014099)	Cdc26 (ENSMOCG00000018577)	Prpf4 (ENSMOCG00000018273)	Wdr31 (ENSMOCG00000022914)	Bspry (ENSMOCG00000022879)	Hdhd3 (ENSMOCG00000022769)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1286	Slc17a7 (ENSNGAG00000021921) #7	Pih1d1 (ENSNGAG00000021616) #8	Aldh16a1 (ENSNGAG00000022707) #9	Flt3l (ENSNGAG00000003724) #10	Rpl13a (ENSNGAG00000021984) #11	Rps11 (ENSNGAG00000021376) #12	Fcgrt (ENSNGAG00000020635) #13	Rcn3 (ENSNGAG00000022084) #14	Nosip (ENSNGAG00000018058) #15	Prrg2 (ENSNGAG00000023084) #16	Prr12 (ENSNGAG00000023139) #17	Rras (ENSNGAG00000015476) #18	Scaf1 (ENSNGAG00000009448) #19	Irf3 (ENSNGAG00000022121) #20	Bcl2l12 (ENSNGAG00000013191) #21	Prmt1 (ENSNGAG00000018656) #22	Cpt1c (ENSNGAG00000022950) #23	Tsks (ENSNGAG00000007904) #24	Ap2a1 (ENSNGAG00000017671) #25	Fuz (ENSNGAG00000021167) #26	Med25 (ENSNGAG00000021950) #28	ENSNGAG00000022507 #29	Pnkp (ENSNGAG00000013598) #30	Akt1s1 (ENSNGAG00000008683) #31	ENSNGAG00000023215 #32	Il4i1 (ENSNGAG00000008304) #33	Nup62 (ENSNGAG00000020299) #34	Atf5 (ENSNGAG00000023365) #35	Vrk3 (ENSNGAG00000013641)	Izumo2 (ENSNGAG00000020951)	Myh14 (ENSNGAG00000014917)