Mammalia	ANCESTRAL SPECIES	86							ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00940000175482	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00390000011694	ENSGT00940000161433	ENSGT00940000161465	ENSGT00560000077365
Theria	ANCESTRAL SPECIES	37	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799 #11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000160506	ENSGT00530000063801.b #35	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000167648
Eutheria	ANCESTRAL SPECIES	21	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT00940000175482	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35
Glires	ANCESTRAL SPECIES	6	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111
Rodentia_B	ANCESTRAL SPECIES	34	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048	ENSGT00390000015068
Myomorpha	ANCESTRAL SPECIES	39	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048	ENSGT00390000015068
Muroidea	ANCESTRAL SPECIES	41	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048	ENSGT00390000015068
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Murinae	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus_B	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v.g #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Mus_C	ANCESTRAL SPECIES	13	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v.g #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Steppe mouse	MODERN SPECIES	2865	ENSMSIG00000020069 #7	Pih1d1 (ENSMSIG00000020099) #8	Aldh16a1 (ENSMSIG00000020116) #9	Flt3l (ENSMSIG00000020203) #10	ENSMSIG00000020261 #11	ENSMSIG00000020310 #12	Fcgrt (ENSMSIG00000020357) #13	Rcn3 (ENSMSIG00000020381) #14	Nosip (ENSMSIG00000020392) #15	Prrg2 (ENSMSIG00000020460) #16	Prr12 (ENSMSIG00000020493) #17	Rras (ENSMSIG00000020541) #18	Scaf1 (ENSMSIG00000020578) #19	Irf3 (ENSMSIG00000020627) #20	Bcl2l12 (ENSMSIG00000020678) #21	Prmt1 (ENSMSIG00000020718) #22	Cpt1c (ENSMSIG00000020889) #23	Tsks (ENSMSIG00000020920) #24	Ap2a1 (ENSMSIG00000020986) #25	Fuz (ENSMSIG00000021162) #26	ENSMSIG00000021217 #27	Med25 (ENSMSIG00000021224) #28	Ptov1 (ENSMSIG00000021311) #29	Pnkp (ENSMSIG00000021391) #30	Akt1s1 (ENSMSIG00000021526) #31	Tbc1d17 (ENSMSIG00000021563) #32	Il4i1 (ENSMSIG00000021614) #33	Nup62 (ENSMSIG00000021640) #34	Atf5 (ENSMSIG00000021644) #35
spretus	DUPLICATION
spretus	MODERN SPECIES	16	Pih1d1 (MGP_SPRETEiJ_G0030799) #8	Aldh16a1 (MGP_SPRETEiJ_G0030798) #9	MGP_SPRETEiJ_G0030797 #10	MGP_SPRETEiJ_G0030796 #11	Rps11 (MGP_SPRETEiJ_G0030795) #12	Fcgrt (MGP_SPRETEiJ_G0030794) #13	Rcn3 (MGP_SPRETEiJ_G0030793) #14	Nosip (MGP_SPRETEiJ_G0030792) #15	Prrg2 (MGP_SPRETEiJ_G0030791) #16	Prr12 (MGP_SPRETEiJ_G0030790) #17	Rras (MGP_SPRETEiJ_G0030789) #18	Scaf1 (MGP_SPRETEiJ_G0030788) #19	Irf3 (MGP_SPRETEiJ_G0030787) #20	Bcl2l12 (MGP_SPRETEiJ_G0030786) #21	MGP_SPRETEiJ_G0030785 #22	MGP_SPRETEiJ_G0030784 #22	Cpt1c (MGP_SPRETEiJ_G0030783) #23	MGP_SPRETEiJ_G0030782 #24	Fuz (MGP_SPRETEiJ_G0030781) #26	Ap2a1 (MGP_SPRETEiJ_G0030780) #25	Med25 (MGP_SPRETEiJ_G0030779) #28	Ptov1 (MGP_SPRETEiJ_G0030778) #29	Pnkp (MGP_SPRETEiJ_G0030777) #30	Akt1s1 (MGP_SPRETEiJ_G0030776) #31	Tbc1d17 (MGP_SPRETEiJ_G0030775) #32	Il4i1 (MGP_SPRETEiJ_G0030774) #33	Atf5 (MGP_SPRETEiJ_G0030773) #35	Vrk3 (MGP_SPRETEiJ_G0030772)	Zfp473 (MGP_SPRETEiJ_G0030771)	Izumo2 (MGP_SPRETEiJ_G0030770)	MGP_SPRETEiJ_G0030769
spretus	MODERN SPECIES	16	Slc17a7 (MGP_SPRETEiJ_G0030800) #7	Pih1d1 (MGP_SPRETEiJ_G0030799) #8	Aldh16a1 (MGP_SPRETEiJ_G0030798) #9	MGP_SPRETEiJ_G0030797 #10	MGP_SPRETEiJ_G0030796 #11	Rps11 (MGP_SPRETEiJ_G0030795) #12	Fcgrt (MGP_SPRETEiJ_G0030794) #13	Rcn3 (MGP_SPRETEiJ_G0030793) #14	Nosip (MGP_SPRETEiJ_G0030792) #15	Prrg2 (MGP_SPRETEiJ_G0030791) #16	Prr12 (MGP_SPRETEiJ_G0030790) #17	Rras (MGP_SPRETEiJ_G0030789) #18	Scaf1 (MGP_SPRETEiJ_G0030788) #19	Irf3 (MGP_SPRETEiJ_G0030787) #20	Bcl2l12 (MGP_SPRETEiJ_G0030786) #21	MGP_SPRETEiJ_G0030785 #22	MGP_SPRETEiJ_G0030784 #22	Cpt1c (MGP_SPRETEiJ_G0030783) #23	MGP_SPRETEiJ_G0030782 #24	Fuz (MGP_SPRETEiJ_G0030781) #26	Ap2a1 (MGP_SPRETEiJ_G0030780) #25	Med25 (MGP_SPRETEiJ_G0030779) #28	Ptov1 (MGP_SPRETEiJ_G0030778) #29	Pnkp (MGP_SPRETEiJ_G0030777) #30	Akt1s1 (MGP_SPRETEiJ_G0030776) #31	Tbc1d17 (MGP_SPRETEiJ_G0030775) #32	Il4i1 (MGP_SPRETEiJ_G0030774) #33	Atf5 (MGP_SPRETEiJ_G0030773) #35	Vrk3 (MGP_SPRETEiJ_G0030772)	Zfp473 (MGP_SPRETEiJ_G0030771)	Izumo2 (MGP_SPRETEiJ_G0030770)
Mouse	MODERN SPECIES	16	Pih1d1 (ENSMUSG00000003423) #8	Aldh16a1 (ENSMUSG00000007833) #9	Flt3l (ENSMUSG00000110206) #10	Gm45713 (ENSMUSG00000089989)	Rpl13a (ENSMUSG00000074129) ##11	Rps11 (ENSMUSG00000003429) #12	Fcgrt (ENSMUSG00000003420) #13	Rcn3 (ENSMUSG00000019539) #14	Nosip (ENSMUSG00000003421) #15	Prrg2 (ENSMUSG00000007837) #16	Prr12 (ENSMUSG00000046574) #17	Rras (ENSMUSG00000038387) #18	Scaf1 (ENSMUSG00000038406) #19	Irf3 (ENSMUSG00000003184) #20	Bcl2l12 (ENSMUSG00000003190) #21	Prmt1 (ENSMUSG00000109324) #22	Cpt1c (ENSMUSG00000007783) #23	Tsks (ENSMUSG00000059891) #24	Ap2a1 (ENSMUSG00000060279) #25	Fuz (ENSMUSG00000011658) #26	Med25 (ENSMUSG00000002968) #28	Ptov1 (ENSMUSG00000038502) #29	Pnkp (ENSMUSG00000002963) #30	Akt1s1 (ENSMUSG00000011096) #31	Tbc1d17 (ENSMUSG00000038520) #32	Il4i1 (ENSMUSG00000074141) #33	Nup62 (ENSMUSG00000109511) #34	Atf5 (ENSMUSG00000038539) #35	Vrk3 (ENSMUSG00000002205)	Zfp473 (ENSMUSG00000048012)	Izumo2 (ENSMUSG00000066500)
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES	16	Pih1d1 (MGP_CAROLIEiJ_G0029701) #8	Aldh16a1 (MGP_CAROLIEiJ_G0029700) #9	MGP_CAROLIEiJ_G0029699 #10	Rpl13a (MGP_CAROLIEiJ_G0029698) #11	Rps11 (MGP_CAROLIEiJ_G0029697) #12	Fcgrt (MGP_CAROLIEiJ_G0029696) #13	Rcn3 (MGP_CAROLIEiJ_G0029695) #14	Nosip (MGP_CAROLIEiJ_G0029694) #15	Prrg2 (MGP_CAROLIEiJ_G0029693) #16	Prr12 (MGP_CAROLIEiJ_G0029692) #17	Rras (MGP_CAROLIEiJ_G0029691) #18	Scaf1 (MGP_CAROLIEiJ_G0029690) #19	Irf3 (MGP_CAROLIEiJ_G0029689) #20	Bcl2l12 (MGP_CAROLIEiJ_G0029688) #21	MGP_CAROLIEiJ_G0029687 #22	MGP_CAROLIEiJ_G0029686 #22	Cpt1c (MGP_CAROLIEiJ_G0029685) #23	Tsks (MGP_CAROLIEiJ_G0029684) #24	Ap2a1 (MGP_CAROLIEiJ_G0029683) #25	Fuz (MGP_CAROLIEiJ_G0029682) #26	Med25 (MGP_CAROLIEiJ_G0029681) #28	Ptov1 (MGP_CAROLIEiJ_G0029680) #29	Pnkp (MGP_CAROLIEiJ_G0029679) #30	Akt1s1 (MGP_CAROLIEiJ_G0029678) #31	Tbc1d17 (MGP_CAROLIEiJ_G0029677) #32	Il4i1 (MGP_CAROLIEiJ_G0029676) #33	Atf5 (MGP_CAROLIEiJ_G0029675) #35	Vrk3 (MGP_CAROLIEiJ_G0029674)	Zfp473 (MGP_CAROLIEiJ_G0029673)	Izumo2 (MGP_CAROLIEiJ_G0029672)	MGP_CAROLIEiJ_G0029671
Ryukyu mouse	MODERN SPECIES	16	Slc17a7 (MGP_CAROLIEiJ_G0029702) #7	Pih1d1 (MGP_CAROLIEiJ_G0029701) #8	Aldh16a1 (MGP_CAROLIEiJ_G0029700) #9	MGP_CAROLIEiJ_G0029699 #10	Rpl13a (MGP_CAROLIEiJ_G0029698) #11	Rps11 (MGP_CAROLIEiJ_G0029697) #12	Fcgrt (MGP_CAROLIEiJ_G0029696) #13	Rcn3 (MGP_CAROLIEiJ_G0029695) #14	Nosip (MGP_CAROLIEiJ_G0029694) #15	Prrg2 (MGP_CAROLIEiJ_G0029693) #16	Prr12 (MGP_CAROLIEiJ_G0029692) #17	Rras (MGP_CAROLIEiJ_G0029691) #18	Scaf1 (MGP_CAROLIEiJ_G0029690) #19	Irf3 (MGP_CAROLIEiJ_G0029689) #20	Bcl2l12 (MGP_CAROLIEiJ_G0029688) #21	MGP_CAROLIEiJ_G0029687 #22	MGP_CAROLIEiJ_G0029686 #22	Cpt1c (MGP_CAROLIEiJ_G0029685) #23	Tsks (MGP_CAROLIEiJ_G0029684) #24	Ap2a1 (MGP_CAROLIEiJ_G0029683) #25	Fuz (MGP_CAROLIEiJ_G0029682) #26	Med25 (MGP_CAROLIEiJ_G0029681) #28	Ptov1 (MGP_CAROLIEiJ_G0029680) #29	Pnkp (MGP_CAROLIEiJ_G0029679) #30	Akt1s1 (MGP_CAROLIEiJ_G0029678) #31	Tbc1d17 (MGP_CAROLIEiJ_G0029677) #32	Il4i1 (MGP_CAROLIEiJ_G0029676) #33	Atf5 (MGP_CAROLIEiJ_G0029675) #35	Vrk3 (MGP_CAROLIEiJ_G0029674)	Zfp473 (MGP_CAROLIEiJ_G0029673)	Izumo2 (MGP_CAROLIEiJ_G0029672)
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES		Pih1d1 (MGP_PahariEiJ_G0012926) #8	Aldh16a1 (MGP_PahariEiJ_G0012925) #9	MGP_PahariEiJ_G0012924 #10	Rpl13a (MGP_PahariEiJ_G0012923) #11	Rps11 (MGP_PahariEiJ_G0012922) #12	Fcgrt (MGP_PahariEiJ_G0012921) #13	Rcn3 (MGP_PahariEiJ_G0012920) #14	Nosip (MGP_PahariEiJ_G0012919) #15	Prrg2 (MGP_PahariEiJ_G0012918) #16	Prr12 (MGP_PahariEiJ_G0012917) #17	Rras (MGP_PahariEiJ_G0012916) #18	Scaf1 (MGP_PahariEiJ_G0012915) #19	Irf3 (MGP_PahariEiJ_G0012914) #20	Bcl2l12 (MGP_PahariEiJ_G0012913) #21	MGP_PahariEiJ_G0012912 #22	MGP_PahariEiJ_G0012911 #22	Cpt1c (MGP_PahariEiJ_G0012910) #23	Tsks (MGP_PahariEiJ_G0012909) #24	Ap2a1 (MGP_PahariEiJ_G0012908) #25	Fuz (MGP_PahariEiJ_G0012907) #26	Med25 (MGP_PahariEiJ_G0012906) #28	Ptov1 (MGP_PahariEiJ_G0012905) #29	Pnkp (MGP_PahariEiJ_G0012904) #30	Akt1s1 (MGP_PahariEiJ_G0012903) #31	Tbc1d17 (MGP_PahariEiJ_G0012902) #32	Il4i1 (MGP_PahariEiJ_G0012901) #33	Atf5 (MGP_PahariEiJ_G0012900) #35	Vrk3 (MGP_PahariEiJ_G0012899)	MGP_PahariEiJ_G0012898	Izumo2 (MGP_PahariEiJ_G0012897)	MGP_PahariEiJ_G0012896
Shrew mouse	MODERN SPECIES		Slc17a7 (MGP_PahariEiJ_G0012927) #7	Pih1d1 (MGP_PahariEiJ_G0012926) #8	Aldh16a1 (MGP_PahariEiJ_G0012925) #9	MGP_PahariEiJ_G0012924 #10	Rpl13a (MGP_PahariEiJ_G0012923) #11	Rps11 (MGP_PahariEiJ_G0012922) #12	Fcgrt (MGP_PahariEiJ_G0012921) #13	Rcn3 (MGP_PahariEiJ_G0012920) #14	Nosip (MGP_PahariEiJ_G0012919) #15	Prrg2 (MGP_PahariEiJ_G0012918) #16	Prr12 (MGP_PahariEiJ_G0012917) #17	Rras (MGP_PahariEiJ_G0012916) #18	Scaf1 (MGP_PahariEiJ_G0012915) #19	Irf3 (MGP_PahariEiJ_G0012914) #20	Bcl2l12 (MGP_PahariEiJ_G0012913) #21	MGP_PahariEiJ_G0012912 #22	MGP_PahariEiJ_G0012911 #22	Cpt1c (MGP_PahariEiJ_G0012910) #23	Tsks (MGP_PahariEiJ_G0012909) #24	Ap2a1 (MGP_PahariEiJ_G0012908) #25	Fuz (MGP_PahariEiJ_G0012907) #26	Med25 (MGP_PahariEiJ_G0012906) #28	Ptov1 (MGP_PahariEiJ_G0012905) #29	Pnkp (MGP_PahariEiJ_G0012904) #30	Akt1s1 (MGP_PahariEiJ_G0012903) #31	Tbc1d17 (MGP_PahariEiJ_G0012902) #32	Il4i1 (MGP_PahariEiJ_G0012901) #33	Atf5 (MGP_PahariEiJ_G0012900) #35	Vrk3 (MGP_PahariEiJ_G0012899)	MGP_PahariEiJ_G0012898	Izumo2 (MGP_PahariEiJ_G0012897)
Rat	DUPLICATION
Rat	DUPLICATION
Rat	DUPLICATION
Rat	MODERN SPECIES	5	ENSRNOG00000070133	AABR07016566.1 (ENSRNOG00000051648)	Actr2 (ENSRNOG00000004959)	Spred2 (ENSRNOG00000004888)	Meis1 (ENSRNOG00000004606)	Etaa1l1 (ENSRNOG00000006185)	Hnrnpk-ps1 (ENSRNOG00000063529)	C1d (ENSRNOG00000005982)	Pno1 (ENSRNOG00000005524)	Cnrip1 (ENSRNOG00000005326)	Plek (ENSRNOG00000005214)	Fbxo48 (ENSRNOG00000023026)	Egfr (ENSRNOG00000004332)	Sec61g (ENSRNOG00000005203)	Vstm2a (ENSRNOG00000005180)	LOC100361025 (ENSRNOG00000004090) #22	Cobl (ENSRNOG00000004281)	Grb10 (ENSRNOG00000004290)	Ddc (ENSRNOG00000004327)	Fignl1 (ENSRNOG00000004440)	Ikzf1 (ENSRNOG00000004444)	Spata48 (ENSRNOG00000037621)	Zpbp (ENSRNOG00000027801)	Vwc2 (ENSRNOG00000049076)	LOC498414 (ENSRNOG00000030665)	LOC685655 (ENSRNOG00000069782)	ENSRNOG00000067374	Abca13 (ENSRNOG00000025645)	Upp1 (ENSRNOG00000004972)	LOC688553 (ENSRNOG00000037632)	Sun3 (ENSRNOG00000005105)
Rat	MODERN SPECIES	19	C9h6orf141 (ENSRNOG00000048967)	Cyp2ac1 (ENSRNOG00000048329)	Rhag (ENSRNOG00000050121)	Crisp2 (ENSRNOG00000013225)	ENSRNOG00000068915	LOC102553880 (ENSRNOG00000039663)	LOC108351994 (ENSRNOG00000063860)	ENSRNOG00000066672	Crisp3 (ENSRNOG00000013496)	Pgk2 (ENSRNOG00000013600)	ENSRNOG00000066520	Crisp1 (ENSRNOG00000013612)	Defb49 (ENSRNOG00000039651)	Defb18 (ENSRNOG00000039650)	Defb16 (ENSRNOG00000066154)	ENSRNOG00000069864 #22	ENSRNOG00000064433	Tfap2d (ENSRNOG00000011642)	Tfap2b (ENSRNOG00000011823)	Pkhd1 (ENSRNOG00000058742)	Il17a (ENSRNOG00000012467)	Il17f (ENSRNOG00000012509)	Mcm3 (ENSRNOG00000012543)	Paqr8 (ENSRNOG00000067120)	Efhc1 (ENSRNOG00000042729)	Tram2 (ENSRNOG00000013046)	RGD1562107 (ENSRNOG00000024755)	Tmem14a (ENSRNOG00000013238)	Gsta3 (ENSRNOG00000056847)	ENSRNOG00000064063	Gsta1 (ENSRNOG00000013484)
Rat	MODERN SPECIES		Gfy (ENSRNOG00000047401)	Slc17a7 (ENSRNOG00000020650) #7	Pih1d1 (ENSRNOG00000020634) #8	Aldh16a1 (ENSRNOG00000020623) #9	Rpl13a (ENSRNOG00000020618) #11	Rps11 (ENSRNOG00000020595) #12	Fcgrt (ENSRNOG00000020583) #13	Rcn3 (ENSRNOG00000043007) #14	Nosip (ENSRNOG00000020543) #15	Prrg2 (ENSRNOG00000020517) #16	Prr12 (ENSRNOG00000059408) #17	Rras (ENSRNOG00000037247) #18	Scaf1 (ENSRNOG00000056946) #19	Irf3 (ENSRNOG00000043388) #20	Bcl2l12 (ENSRNOG00000020486) #21	Prmt1 (ENSRNOG00000026109) #22	Cpt1c (ENSRNOG00000026163) #23	Tsks (ENSRNOG00000020443) #24	Ap2a1 (ENSRNOG00000026243) #25	Fuz (ENSRNOG00000053084) #26	Med25 (ENSRNOG00000020363) #28	Ptov1 (ENSRNOG00000020358) #29	Pnkp (ENSRNOG00000020318) #30	Akt1s1 (ENSRNOG00000020289) #31	Tbc1d17 (ENSRNOG00000020191) #32	Atf5 (ENSRNOG00000020060) #35	Il4i1 (ENSRNOG00000020148) #33	Nup62 (ENSRNOG00000048733) #34	Vrk3 (ENSRNOG00000026517)	Zfp473 (ENSRNOG00000026572)	Izumo2 (ENSRNOG00000065701)
Rat	MODERN SPECIES	16	Efcab11 (ENSRNOG00000053317)	Foxn3 (ENSRNOG00000004709)	Cpg1 (ENSRNOG00000060278)	Ttc8 (ENSRNOG00000004542)	Eml5 (ENSRNOG00000004207)	Zc3h14 (ENSRNOG00000004083)	Ptpn21 (ENSRNOG00000060568)	Spata7 (ENSRNOG00000003955)	Kcnk10 (ENSRNOG00000003813)	Gpr65 (ENSRNOG00000065590)	Galc (ENSRNOG00000003759)	Flrt2 (ENSRNOG00000003732)	ENSRNOG00000066374	LOC103692684 (ENSRNOG00000070197)	AABR07065265.1 (ENSRNOG00000021751)	ENSRNOG00000066641 #22	ENSRNOG00000030420	AABR07065217.2 (ENSRNOG00000042542)	Sel1l (ENSRNOG00000004464)	Ston2 (ENSRNOG00000004458)	Gtf2a1 (ENSRNOG00000004300)	Tshr (ENSRNOG00000003972)	Cep128 (ENSRNOG00000003908)	Dio2 (ENSRNOG00000062383)	ENSRNOG00000063297	ENSRNOG00000062878	dsr-2 (ENSRNOG00000066815)	Nrxn3 (ENSRNOG00000047574)	Adck1 (ENSRNOG00000012685)	ENSRNOG00000062977	LOC100912568 (ENSRNOG00000069554)
Cricetidae	ANCESTRAL SPECIES	28	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Cricetinae	ANCESTRAL SPECIES	33	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048	ENSGT00390000015068
Golden Hamster	MODERN SPECIES	792	Kash5 (ENSMAUG00000020117)	Pth2 (ENSMAUG00000017781)	Gfy (ENSMAUG00000018963)	Slc17a7 (ENSMAUG00000000717) #7	Pih1d1 (ENSMAUG00000017490) #8	Aldh16a1 (ENSMAUG00000008671) #9	Flt3l (ENSMAUG00000012216) #10	Fcgrt (ENSMAUG00000013272) #13	Rcn3 (ENSMAUG00000012208) #14	Prrg2 (ENSMAUG00000012143) #16	Prr12 (ENSMAUG00000001460) #17	Rras (ENSMAUG00000022179) #18	Scaf1 (ENSMAUG00000019574) #19	Irf3 (ENSMAUG00000022168) #20	Bcl2l12 (ENSMAUG00000014186) #21	Prmt1 (ENSMAUG00000005917) #22	ENSMAUG00000015570 #23	Tsks (ENSMAUG00000001231) #24	Ap2a1 (ENSMAUG00000005134) #25	ENSMAUG00000004157 #26	Med25 (ENSMAUG00000010098) #28	Ptov1 (ENSMAUG00000014396) #29	Pnkp (ENSMAUG00000018809) #30	Akt1s1 (ENSMAUG00000018933) #31	ENSMAUG00000012091 #32	Il4i1 (ENSMAUG00000014929) #33	Nup62 (ENSMAUG00000019906) #34	Atf5 (ENSMAUG00000019941) #35	Vrk3 (ENSMAUG00000015093)	Zfp473 (ENSMAUG00000017471)	Izumo2 (ENSMAUG00000001423)
Chinese hamster chok1gshd	MODERN SPECIES	271	Slc17a7 (ENSCGRG00001007021) #7	Pih1d1 (ENSCGRG00001013397) #8	Aldh16a1 (ENSCGRG00001016532) #9	Flt3l (ENSCGRG00001017445) #10	ENSCGRG00001018651 #11	Rps11 (ENSCGRG00001023575) #12	Fcgrt (ENSCGRG00001000744) #13	Rcn3 (ENSCGRG00001003964) #14	Nosip (ENSCGRG00001013092) #15	Prrg2 (ENSCGRG00001014643) #16	Prr12 (ENSCGRG00001016597) #17	Rras (ENSCGRG00001019817) #18	Scaf1 (ENSCGRG00001021428) #19	Irf3 (ENSCGRG00001000404) #20	Bcl2l12 (ENSCGRG00001008963) #21	Prmt1 (ENSCGRG00001018188) #22	Cpt1c (ENSCGRG00001015931) #23	ENSCGRG00001019632	ENSCGRG00001022440 #24	Ap2a1 (ENSCGRG00001004014) #25	ENSCGRG00001002717	Fuz (ENSCGRG00001000345) #26	Med25 (ENSCGRG00001022723) #28	Ptov1 (ENSCGRG00001013179) #29	Pnkp (ENSCGRG00001019341) #30	Akt1s1 (ENSCGRG00001021290) #31	Tbc1d17 (ENSCGRG00001014714) #32	Il4i1 (ENSCGRG00001017543) #33	Nup62 (ENSCGRG00001016364) #34	Atf5 (ENSCGRG00001020961) #35	Vrk3 (ENSCGRG00001001410)
Cricetidae_B	ANCESTRAL SPECIES	31	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.v #11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00960000192808 #27	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00390000015068
Northern American deer mouse	MODERN SPECIES		Slc17a7 (ENSPEMG00000018918) #7	Pih1d1 (ENSPEMG00000011439) #8	Aldh16a1 (ENSPEMG00000004925) #9	Flt3l (ENSPEMG00000012798) #10	Rpl13a (ENSPEMG00000009221) #11	Rps11 (ENSPEMG00000015976) #12	Fcgrt (ENSPEMG00000010129) #13	Rcn3 (ENSPEMG00000015947) #14	Nosip (ENSPEMG00000011136) #15	Prrg2 (ENSPEMG00000001303) #16	Prr12 (ENSPEMG00000010751) #17	Rras (ENSPEMG00000017709) #18	Scaf1 (ENSPEMG00000013288) #19	Irf3 (ENSPEMG00000010948) #20	Bcl2l12 (ENSPEMG00000017405) #21	Prmt1 (ENSPEMG00000014287) #22	Cpt1c (ENSPEMG00000013161) #23	Tsks (ENSPEMG00000012885) #24	Ap2a1 (ENSPEMG00000013224) #25	Fuz (ENSPEMG00000006496) #26	ENSPEMG00000024339 #27	Med25 (ENSPEMG00000009126) #28	Ptov1 (ENSPEMG00000030238) #29	Pnkp (ENSPEMG00000004786) #30	Akt1s1 (ENSPEMG00000010956) #31	Tbc1d17 (ENSPEMG00000010004) #32	Il4i1 (ENSPEMG00000006448) #33	Nup62 (ENSPEMG00000010597) #34	Atf5 (ENSPEMG00000029877) #35	Vrk3 (ENSPEMG00000013077)	Izumo2 (ENSPEMG00000008634)
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	97	Slc17a7 (ENSMOCG00000008964) #7	Pih1d1 (ENSMOCG00000017144) #8	Aldh16a1 (ENSMOCG00000005158) #9	Flt3l (ENSMOCG00000010342) #10	ENSMOCG00000002774 #11	Rps11 (ENSMOCG00000014469) #12	Fcgrt (ENSMOCG00000017574) #13	Rcn3 (ENSMOCG00000000557) #14	ENSMOCG00000002542 #15	Prrg2 (ENSMOCG00000003675) #16	Prr12 (ENSMOCG00000018369) #17	Rras (ENSMOCG00000002251) #18	Scaf1 (ENSMOCG00000012474) #19	Irf3 (ENSMOCG00000013920) #20	Bcl2l12 (ENSMOCG00000022863) #21	ENSMOCG00000004064 #22	Cpt1c (ENSMOCG00000001831) #23	Tsks (ENSMOCG00000012880) #24	Ap2a1 (ENSMOCG00000007825) #25	Fuz (ENSMOCG00000003081) #26	Med25 (ENSMOCG00000006863) #28	Ptov1 (ENSMOCG00000003051) #29	Pnkp (ENSMOCG00000006264) #30	Akt1s1 (ENSMOCG00000014526) #31	ENSMOCG00000020458 #32	Il4i1 (ENSMOCG00000009373) #33	ENSMOCG00000000871	Atf5 (ENSMOCG00000001321) #35	ENSMOCG00000003289	Vrk3 (ENSMOCG00000004276)	Izumo2 (ENSMOCG00000014130)
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	101	Wdr86 (ENSMOCG00000000597)	Crygn (ENSMOCG00000015061)	Rheb (ENSMOCG00000022240)	Prkag2 (ENSMOCG00000001286)	Galntl5 (ENSMOCG00000013714)	Galnt11 (ENSMOCG00000005276)	ENSMOCG00000001053	ENSMOCG00000020782	ENSMOCG00000016671	Actr3b (ENSMOCG00000004828)	Dpp6 (ENSMOCG00000000556)	Paxip1 (ENSMOCG00000013649)	Htr5a (ENSMOCG00000019605)	Insig1 (ENSMOCG00000020032)	En2 (ENSMOCG00000015841)	ENSMOCG00000019441 #22	ENSMOCG00000010240	Rbm33 (ENSMOCG00000021895)	Shh (ENSMOCG00000008843)	ENSMOCG00000013020	ENSMOCG00000018001	Rnf32 (ENSMOCG00000014460)	Lmbr1 (ENSMOCG00000008297)	ENSMOCG00000010734	Nom1 (ENSMOCG00000015962)	Mnx1 (ENSMOCG00000020173)	ENSMOCG00000002622	Ube3c (ENSMOCG00000018821)	ENSMOCG00000018590	ENSMOCG00000018608	ENSMOCG00000002213
Prairie vole	MODERN SPECIES	1	Zdhhc21 (ENSMOCG00000015320)	Nfib (ENSMOCG00000021986)	ENSMOCG00000020921	ENSMOCG00000018271	Lurap1l (ENSMOCG00000015966)	Tyrp1 (ENSMOCG00000015263)	ENSMOCG00000004135	Ptprd (ENSMOCG00000001990)	ENSMOCG00000015211	ENSMOCG00000012575	ENSMOCG00000013894	Frmd3 (ENSMOCG00000008934)	2310002L09Rik (ENSMOCG00000022037)	Rasef (ENSMOCG00000000943)	Tle1 (ENSMOCG00000017405)	ENSMOCG00000019378 #22	Megf9 (ENSMOCG00000018603)	E130308A19Rik (ENSMOCG00000014658)	Inip (ENSMOCG00000001218)	Snx30 (ENSMOCG00000000536)	Slc46a2 (ENSMOCG00000013061)	ENSMOCG00000004604	Zfp37 (ENSMOCG00000019734)	Slc31a2 (ENSMOCG00000013063)	Fkbp15 (ENSMOCG00000015155)	Slc31a1 (ENSMOCG00000014099)	Cdc26 (ENSMOCG00000018577)	Prpf4 (ENSMOCG00000018273)	Wdr31 (ENSMOCG00000022914)	Bspry (ENSMOCG00000022879)	Hdhd3 (ENSMOCG00000022769)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1286	Slc17a7 (ENSNGAG00000021921) #7	Pih1d1 (ENSNGAG00000021616) #8	Aldh16a1 (ENSNGAG00000022707) #9	Flt3l (ENSNGAG00000003724) #10	Rpl13a (ENSNGAG00000021984) #11	Rps11 (ENSNGAG00000021376) #12	Fcgrt (ENSNGAG00000020635) #13	Rcn3 (ENSNGAG00000022084) #14	Nosip (ENSNGAG00000018058) #15	Prrg2 (ENSNGAG00000023084) #16	Prr12 (ENSNGAG00000023139) #17	Rras (ENSNGAG00000015476) #18	Scaf1 (ENSNGAG00000009448) #19	Irf3 (ENSNGAG00000022121) #20	Bcl2l12 (ENSNGAG00000013191) #21	Prmt1 (ENSNGAG00000018656) #22	Cpt1c (ENSNGAG00000022950) #23	Tsks (ENSNGAG00000007904) #24	Ap2a1 (ENSNGAG00000017671) #25	Fuz (ENSNGAG00000021167) #26	Med25 (ENSNGAG00000021950) #28	ENSNGAG00000022507 #29	Pnkp (ENSNGAG00000013598) #30	Akt1s1 (ENSNGAG00000008683) #31	ENSNGAG00000023215 #32	Il4i1 (ENSNGAG00000008304) #33	Nup62 (ENSNGAG00000020299) #34	Atf5 (ENSNGAG00000023365) #35	Vrk3 (ENSNGAG00000013641)	Izumo2 (ENSNGAG00000020951)	Myh14 (ENSNGAG00000014917)
Lesser Egyptian jerboa	MODERN SPECIES	228	Slc17a7 (ENSJJAG00000003062) #7	Pih1d1 (ENSJJAG00000024001) #8	Aldh16a1 (ENSJJAG00000015970) #9	ENSJJAG00000011073 #10	Rpl13a (ENSJJAG00000000343) #11	Rps11 (ENSJJAG00000021986) #12	Fcgrt (ENSJJAG00000023789) #13	Rcn3 (ENSJJAG00000023309) #14	ENSJJAG00000023221 #15	Prrg2 (ENSJJAG00000020611) #16	Prr12 (ENSJJAG00000003240) #17	Rras (ENSJJAG00000000707) #18	Scaf1 (ENSJJAG00000020045) #19	ENSJJAG00000018742 #20	Bcl2l12 (ENSJJAG00000017216) #21	Prmt1 (ENSJJAG00000018374) #22	Cpt1c (ENSJJAG00000009112) #23	Tsks (ENSJJAG00000004998) #24	Ap2a1 (ENSJJAG00000024079) #25	Fuz (ENSJJAG00000021197) #26	ENSJJAG00000018751 #28	Ptov1 (ENSJJAG00000013264) #29	Pnkp (ENSJJAG00000010976) #30	Akt1s1 (ENSJJAG00000007281) #31	ENSJJAG00000004161 #32	ENSJJAG00000023850 #32	Nup62 (ENSJJAG00000015756) #34	Atf5 (ENSJJAG00000015377) #35
Kangaroo rat	MODERN SPECIES	424	Pth2 (ENSDORG00000013590)	ENSDORG00000028515	Slc17a7 (ENSDORG00000013592) #7	Pih1d1 (ENSDORG00000013596) #8	Aldh16a1 (ENSDORG00000013597) #9	Rpl13a (ENSDORG00000012194) #11	ENSDORG00000012195 #12	Rcn3 (ENSDORG00000012197) #14	ENSDORG00000001351 #15	Prrg2 (ENSDORG00000000079) #16	Prr12 (ENSDORG00000014917) #17	Rras (ENSDORG00000014918) #18	Scaf1 (ENSDORG00000014919) #19	Irf3 (ENSDORG00000014920) #20	Bcl2l12 (ENSDORG00000014921) #21	Prmt1 (ENSDORG00000014923) #22	ENSDORG00000014925 #23	ENSDORG00000027048 #23	Tsks (ENSDORG00000014926) #24	Ap2a1 (ENSDORG00000014931) #25	Fuz (ENSDORG00000014940) #26	ENSDORG00000027418 #28	ENSDORG00000029463 #29	Pnkp (ENSDORG00000014945) #30	Akt1s1 (ENSDORG00000014947) #31	ENSDORG00000026351 #32	ENSDORG00000014948 #32	Il4i1 (ENSDORG00000014950) #33	Nup62 (ENSDORG00000014951) #34	Atf5 (ENSDORG00000028077) #35	Vrk3 (ENSDORG00000002810)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.e.a ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT01100000267133	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302.i #30	ENSGT00940000159302.j #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111
Naked mole-rat female	MODERN SPECIES	21	PTH2 (ENSHGLG00000009333)	SLC17A7 (ENSHGLG00000011238) #7	ALDH16A1 (ENSHGLG00000010891) #9	FLT3LG (ENSHGLG00000007895) #10	ENSHGLG00000010070 ##11	RPS11 (ENSHGLG00000040635) #12	FCGRT (ENSHGLG00000040787) #13	RCN3 (ENSHGLG00000048489) #14	ENSHGLG00000046891 #15	ENSHGLG00000043624	ENSHGLG00000011479 #8	ENSHGLG00000043111 #18	ENSHGLG00000038097 #19	IRF3 (ENSHGLG00000009400) #20	BCL2L12 (ENSHGLG00000008378) #21	PRMT1 (ENSHGLG00000006326) #22	ENSHGLG00000041739	ENSHGLG00000032781	ENSHGLG00000047510 #23	TSKS (ENSHGLG00000005186) #24	ENSHGLG00000050426 #25	ENSHGLG00000040645	ENSHGLG00000038378 #26	ENSHGLG00000038144 #28	PTOV1 (ENSHGLG00000017957) #29	ENSHGLG00000013804 #30	ENSHGLG00000045780	ENSHGLG00000033639 #30	AKT1S1 (ENSHGLG00000040304) #31	ENSHGLG00000044259 #32	ENSHGLG00000036978 #32
Hystricomorpha_a	ANCESTRAL SPECIES	33	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.f ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302.i #30	ENSGT00940000159302.j #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Guinea pig	MODERN SPECIES	70	SLC17A7 (ENSCPOG00000006786) #7	PIH1D1 (ENSCPOG00000026119) #8	ALDH16A1 (ENSCPOG00000002850) #9	FLT3LG (ENSCPOG00000022577) #10	ENSCPOG00000012417 ##11	RPS11 (ENSCPOG00000015145) #12	FCGRT (ENSCPOG00000025125) #13	RCN3 (ENSCPOG00000003639) #14	NOSIP (ENSCPOG00000011811) #15	PRRG2 (ENSCPOG00000008051) #16	PRR12 (ENSCPOG00000011808) #17	RRAS (ENSCPOG00000033433) #18	SCAF1 (ENSCPOG00000019794) #19	IRF3 (ENSCPOG00000026146) #20	BCL2L12 (ENSCPOG00000005156) #21	PRMT1 (ENSCPOG00000019328) #22	CPT1C (ENSCPOG00000015483) #23	TSKS (ENSCPOG00000005997) #24	AP2A1 (ENSCPOG00000005104) #25	FUZ (ENSCPOG00000005113) #26	MED25 (ENSCPOG00000005117) #28	PTOV1 (ENSCPOG00000035204) #29	PNKP (ENSCPOG00000005127) #30	AKT1S1 (ENSCPOG00000019888) #31	TBC1D17 (ENSCPOG00000005133) #32	NUP62 (ENSCPOG00000038392) #34	IL4I1 (ENSCPOG00000005143) #33	ATF5 (ENSCPOG00000038313) #35	VRK3 (ENSCPOG00000021853)	ZNF473 (ENSCPOG00000007696)	ENSCPOG00000011703
Hystricomorpha_b	ANCESTRAL SPECIES	65	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.f ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302.i #30	ENSGT00940000159302.j #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Long-tailed chinchilla	MODERN SPECIES	266	SLC17A7 (ENSCLAG00000004681) #7	PIH1D1 (ENSCLAG00000004603) #8	ALDH16A1 (ENSCLAG00000004135) #9	FLT3LG (ENSCLAG00000003815) #10	ENSCLAG00000012323 ##11	RPS11 (ENSCLAG00000011518) #12	FCGRT (ENSCLAG00000008478) #13	RCN3 (ENSCLAG00000008137) #14	NOSIP (ENSCLAG00000007784) #15	PRRG2 (ENSCLAG00000007479) #16	PRR12 (ENSCLAG00000007194) #17	RRAS (ENSCLAG00000004920) #18	ENSCLAG00000004727 #19	IRF3 (ENSCLAG00000004576) #20	BCL2L12 (ENSCLAG00000004288) #21	PRMT1 (ENSCLAG00000003806) #22	ENSCLAG00000006977 #23	TSKS (ENSCLAG00000006760) #24	AP2A1 (ENSCLAG00000010607) #25	FUZ (ENSCLAG00000016293) #26	MED25 (ENSCLAG00000009793) #28	PTOV1 (ENSCLAG00000007773) #29	ENSCLAG00000010053 #30	AKT1S1 (ENSCLAG00000009882) #31	TBC1D17 (ENSCLAG00000008838) #32	IL4I1 (ENSCLAG00000007325) #33	NUP62 (ENSCLAG00000007138) #34	ATF5 (ENSCLAG00000008535) #35	VRK3 (ENSCLAG00000008415)	ZNF473 (ENSCLAG00000008267)	MYH14 (ENSCLAG00000006607)
Degu	DUPLICATION
Degu	MODERN SPECIES	44	ENSODEG00000020536	ENSODEG00000018457	KATNAL2 (ENSODEG00000018481)	HDHD2 (ENSODEG00000018388)	IER3IP1 (ENSODEG00000018375)	SKOR2 (ENSODEG00000018363)	ENSODEG00000018367	ENSODEG00000018340	ENSODEG00000018377	SMAD2 (ENSODEG00000018373)	ZBTB7C (ENSODEG00000018417)	CTIF (ENSODEG00000018390)	SMAD7 (ENSODEG00000018424)	DYM (ENSODEG00000018486)	ENSODEG00000018393	ENSODEG00000018365 #22	ENSODEG00000018460 #22	ENSODEG00000020491	C18orf32 (ENSODEG00000018385)	ENSODEG00000018384	ENSODEG00000018441	ENSODEG00000018444	ENSODEG00000018445	LIPG (ENSODEG00000018437)	ENSODEG00000018376	MYO5B (ENSODEG00000018483)	ENSODEG00000018463	MBD1 (ENSODEG00000018451)	CXXC1 (ENSODEG00000018469)	ENSODEG00000018389	ENSODEG00000018396
Degu	MODERN SPECIES	309	SLC17A7 (ENSODEG00000017136) #7	PIH1D1 (ENSODEG00000017073) #8	ALDH16A1 (ENSODEG00000016912) #9	ENSODEG00000017084 #10	ENSODEG00000016831 ##11	ENSODEG00000016970 #12	FCGRT (ENSODEG00000017231) #13	RCN3 (ENSODEG00000016858) #14	NOSIP (ENSODEG00000016859) #15	PRRG2 (ENSODEG00000016952) #16	PRR12 (ENSODEG00000016863) #17	RRAS (ENSODEG00000016763) #18	SCAF1 (ENSODEG00000017762) #19	IRF3 (ENSODEG00000017008) #20	BCL2L12 (ENSODEG00000016838) #21	ENSODEG00000016694 #22	CPT1C (ENSODEG00000017021) #23	TSKS (ENSODEG00000017089) #24	AP2A1 (ENSODEG00000016865) #25	FUZ (ENSODEG00000016367) #26	ENSODEG00000017065 #28	PTOV1 (ENSODEG00000016855) #29	PNKP (ENSODEG00000016593) #30	ENSODEG00000016659	TBC1D17 (ENSODEG00000016577) #32	IL4I1 (ENSODEG00000016671) #33	NUP62 (ENSODEG00000016565) #34	ATF5 (ENSODEG00000016787) #35	ENSODEG00000016554	ENSODEG00000016849	VRK3 (ENSODEG00000016490)
Degu	MODERN SPECIES	44	ENSODEG00000018457	KATNAL2 (ENSODEG00000018481)	HDHD2 (ENSODEG00000018388)	IER3IP1 (ENSODEG00000018375)	SKOR2 (ENSODEG00000018363)	ENSODEG00000018367	ENSODEG00000018340	ENSODEG00000018377	SMAD2 (ENSODEG00000018373)	ZBTB7C (ENSODEG00000018417)	CTIF (ENSODEG00000018390)	SMAD7 (ENSODEG00000018424)	DYM (ENSODEG00000018486)	ENSODEG00000018393	ENSODEG00000018365 #22	ENSODEG00000018460 #22	ENSODEG00000020491	C18orf32 (ENSODEG00000018385)	ENSODEG00000018384	ENSODEG00000018441	ENSODEG00000018444	ENSODEG00000018445	LIPG (ENSODEG00000018437)	ENSODEG00000018376	MYO5B (ENSODEG00000018483)	ENSODEG00000018463	MBD1 (ENSODEG00000018451)	CXXC1 (ENSODEG00000018469)	ENSODEG00000018389	ENSODEG00000018396	ENSODEG00000018450
Sciuridae	ANCESTRAL SPECIES	36	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Eurasian red squirrel	MODERN SPECIES	8	PIH1D1 (ENSSVLG00005019780) #8	ALDH16A1 (ENSSVLG00005019893) #9	FLT3LG (ENSSVLG00005020373) #10	ENSSVLG00005020410 ##11	ENSSVLG00005020539 #12	FCGRT (ENSSVLG00005020604) #13	RCN3 (ENSSVLG00005020707) #14	NOSIP (ENSSVLG00005020742) #15	PRRG2 (ENSSVLG00005020778) #16	ENSSVLG00005020873 #17	ENSSVLG00005020892 #17	RRAS (ENSSVLG00005020957) #18	SCAF1 (ENSSVLG00005020993) #19	IRF3 (ENSSVLG00005021057) #20	ENSSVLG00005021344 #21	PRMT1 (ENSSVLG00005021460) #22	CPT1C (ENSSVLG00005021628) #23	TSKS (ENSSVLG00005021672) #24	AP2A1 (ENSSVLG00005021771) #25	ENSSVLG00005021820 #26	MED25 (ENSSVLG00005021880) #28	PNKP (ENSSVLG00005022053) #30	AKT1S1 (ENSSVLG00005022107) #31	TBC1D17 (ENSSVLG00005022203) #32	IL4I1 (ENSSVLG00005022427) #33	ATF5 (ENSSVLG00005022475) #35	ENSSVLG00005022533	VRK3 (ENSSVLG00005022803)	ZNF473 (ENSSVLG00005022988)	IZUMO2 (ENSSVLG00005023039)	MYH14 (ENSSVLG00005023153)
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.d ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.c #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Alpin marmot	MODERN SPECIES	45	PIH1D1 (ENSMMMG00000009345) #8	ALDH16A1 (ENSMMMG00000009292) #9	FLT3LG (ENSMMMG00000009274) #10	ENSMMMG00000009223 ##11	RPS11 (ENSMMMG00000009205) #12	FCGRT (ENSMMMG00000009200) #13	RCN3 (ENSMMMG00000009187) #14	NOSIP (ENSMMMG00000009170) #15	PRRG2 (ENSMMMG00000009090) #16	PRR12 (ENSMMMG00000008958) #17	RRAS (ENSMMMG00000008947) #18	ENSMMMG00000008939 #19	ENSMMMG00000008929 #19	IRF3 (ENSMMMG00000008918) #20	BCL2L12 (ENSMMMG00000008873) #21	PRMT1 (ENSMMMG00000008667) #22	CPT1C (ENSMMMG00000008619) #23	TSKS (ENSMMMG00000008591) #24	AP2A1 (ENSMMMG00000008509) #25	FUZ (ENSMMMG00000008435) #26	ENSMMMG00000008300 #28	PTOV1 (ENSMMMG00000008291) #29	AKT1S1 (ENSMMMG00000008260) #31	TBC1D17 (ENSMMMG00000008210) #32	IL4I1 (ENSMMMG00000008201) #33	NUP62 (ENSMMMG00000008198) #34	ATF5 (ENSMMMG00000008183) #35	VRK3 (ENSMMMG00000008145)	ZNF473 (ENSMMMG00000008136)	IZUMO2 (ENSMMMG00000008119)	MYH14 (ENSMMMG00000007529)
Marmotini_b	ANCESTRAL SPECIES	22	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.d ##11	ENSGT00390000002732.n.`b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.c #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Squirrel	MODERN SPECIES	264	SLC17A7 (ENSSTOG00000014610) #7	PIH1D1 (ENSSTOG00000025836) #8	ALDH16A1 (ENSSTOG00000014893) #9	FLT3LG (ENSSTOG00000033194) #10	ENSSTOG00000021558 ##11	RPS11 (ENSSTOG00000023443) #12	FCGRT (ENSSTOG00000014628) #13	RCN3 (ENSSTOG00000014632) #14	NOSIP (ENSSTOG00000014638) #15	PRRG2 (ENSSTOG00000014274) #16	PRR12 (ENSSTOG00000025104) #17	RRAS (ENSSTOG00000001860) #18	SCAF1 (ENSSTOG00000019495) #19	IRF3 (ENSSTOG00000022900) #20	BCL2L12 (ENSSTOG00000005394) #21	PRMT1 (ENSSTOG00000025543) #22	CPT1C (ENSSTOG00000015267) #23	TSKS (ENSSTOG00000009763) #24	AP2A1 (ENSSTOG00000012743) #25	FUZ (ENSSTOG00000031126) #26	MED25 (ENSSTOG00000012769) #28	PTOV1 (ENSSTOG00000012781) #29	PNKP (ENSSTOG00000019487) #30	AKT1S1 (ENSSTOG00000012784) #31	TBC1D17 (ENSSTOG00000012787) #32	IL4I1 (ENSSTOG00000019779) #33	NUP62 (ENSSTOG00000022115) #34	ATF5 (ENSSTOG00000025471) #35
Arctic ground squirrel	MODERN SPECIES	332	SLC17A7 (ENSUPAG00010013549) #7	PIH1D1 (ENSUPAG00010013578) #8	ALDH16A1 (ENSUPAG00010013606) #9	FLT3LG (ENSUPAG00010013649) #10	ENSUPAG00010013671 ##11	RPS11 (ENSUPAG00010013718) #12	FCGRT (ENSUPAG00010013737) #13	RCN3 (ENSUPAG00010013756) #14	NOSIP (ENSUPAG00010013771) #15	ENSUPAG00010013794 #16	PRR12 (ENSUPAG00010013819) #17	RRAS (ENSUPAG00010013833) #18	SCAF1 (ENSUPAG00010013843) #19	IRF3 (ENSUPAG00010013866) #20	BCL2L12 (ENSUPAG00010013879) #21	PRMT1 (ENSUPAG00010013901) #22	ENSUPAG00010013972	CPT1C (ENSUPAG00010013990) #23	TSKS (ENSUPAG00010014030) #24	AP2A1 (ENSUPAG00010014052) #25	FUZ (ENSUPAG00010014135) #26	MED25 (ENSUPAG00010014262) #28	PTOV1 (ENSUPAG00010014392) #29	PNKP (ENSUPAG00010014426) #30	AKT1S1 (ENSUPAG00010014460) #31	TBC1D17 (ENSUPAG00010014480) #32	IL4I1 (ENSUPAG00010014508) #33	NUP62 (ENSUPAG00010014523) #34	ATF5 (ENSUPAG00010014527) #35	VRK3 (ENSUPAG00010014540)	ZNF473 (ENSUPAG00010014576)
Lagomorpha	ANCESTRAL SPECIES	394														ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23
Rabbit	MODERN SPECIES	872			ENSOCUG00000011123	PTH2 (ENSOCUG00000027010)	GFY (ENSOCUG00000031284)	SLC17A7 (ENSOCUG00000012799) #7	PIH1D1 (ENSOCUG00000003821) #8	ALDH16A1 (ENSOCUG00000026756) #9	RPL13A (ENSOCUG00000025258) ##11	FCGRT (ENSOCUG00000024751) #13	NOSIP (ENSOCUG00000027829) #15	ENSOCUG00000038726	ENSOCUG00000021401 #19	ENSOCUG00000027558	BCL2L12 (ENSOCUG00000010676) #21	PRMT1 (ENSOCUG00000022192) #22
Pika	MODERN SPECIES	892														IRF3 (ENSOPRG00000001971) #20	BCL2L12 (ENSOPRG00000001983) #21	PRMT1 (ENSOPRG00000002011) #22	CPT1C (ENSOPRG00000002029) #23
Tree shrew	MODERN SPECIES	1163											PRRG2 (ENSTBEG00000009451) #16	ENSTBEG00000009565 #17	SCAF1 (ENSTBEG00000002625) #19	ENSTBEG00000003466 #20	BCL2L12 (ENSTBEG00000003752) #21	PRMT1 (ENSTBEG00000005303) #22
Primates	ANCESTRAL SPECIES	15	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Bushbaby	MODERN SPECIES	326	PTH2 (ENSOGAG00000025508)	SLC17A7 (ENSOGAG00000000525) #7	PIH1D1 (ENSOGAG00000004612) #8	ALDH16A1 (ENSOGAG00000004615) #9	ENSOGAG00000004625 ##11	ENSOGAG00000004627 #12	FCGRT (ENSOGAG00000033149) #13	RCN3 (ENSOGAG00000015973) #14	NOSIP (ENSOGAG00000031136) #15	PRRG2 (ENSOGAG00000029157) #16	PRR12 (ENSOGAG00000028634) #17	RRAS (ENSOGAG00000010243) #18	SCAF1 (ENSOGAG00000034071) #19	IRF3 (ENSOGAG00000011935) #20	BCL2L12 (ENSOGAG00000024949) #21	PRMT1 (ENSOGAG00000011938) #22	CPT1C (ENSOGAG00000012448) #23	TSKS (ENSOGAG00000009741) #24	AP2A1 (ENSOGAG00000016501) #25	FUZ (ENSOGAG00000024265) #26	MED25 (ENSOGAG00000005310) #28	PTOV1 (ENSOGAG00000027242) #29	PNKP (ENSOGAG00000005313) #30	AKT1S1 (ENSOGAG00000005316) #31	TBC1D17 (ENSOGAG00000005319) #32	IL4I1 (ENSOGAG00000005324) #33	NUP62 (ENSOGAG00000031905) #34	ATF5 (ENSOGAG00000024883) #35	ENSOGAG00000013807	VRK3 (ENSOGAG00000008746)	ZNF473 (ENSOGAG00000025068)
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT01050000246259	ENSGT00530000063801.b #35	ENSGT00940000158111
Mouse lemur	MODERN SPECIES	14	SLC17A7 (ENSMICG00000030896) #7	PIH1D1 (ENSMICG00000009307) #8	ALDH16A1 (ENSMICG00000027350) #9	FLT3LG (ENSMICG00000030023) #10	ENSMICG00000009318 ##11	ENSMICG00000028139 #12	FCGRT (ENSMICG00000008987) #13	RCN3 (ENSMICG00000045822) #14	NOSIP (ENSMICG00000009006) #15	PRRG2 (ENSMICG00000009845) #16	PRR12 (ENSMICG00000032448) #17	RRAS (ENSMICG00000001757) #18	SCAF1 (ENSMICG00000032113) #19	IRF3 (ENSMICG00000001752) #20	BCL2L12 (ENSMICG00000001755) #21	PRMT1 (ENSMICG00000030079) #22	ENSMICG00000044006	CPT1C (ENSMICG00000013992) #23	TSKS (ENSMICG00000013406) #24	AP2A1 (ENSMICG00000003081) #25	FUZ (ENSMICG00000003089) #26	MED25 (ENSMICG00000003098) #28	PTOV1 (ENSMICG00000003113) #29	PNKP (ENSMICG00000003120) #30	AKT1S1 (ENSMICG00000044841) #31	TBC1D17 (ENSMICG00000003129) #32	IL4I1 (ENSMICG00000028489) #33	ENSMICG00000043052 #35	VRK3 (ENSMICG00000006537)	ZNF473 (ENSMICG00000038653)	IZUMO2 (ENSMICG00000046551)
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT01050000246259	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.f
Greater bamboo lemur	MODERN SPECIES	1049	SLC17A7 (ENSPSMG00000022041) #7	PIH1D1 (ENSPSMG00000022069) #8	ALDH16A1 (ENSPSMG00000022163) #9	FLT3LG (ENSPSMG00000022197) #10	ENSPSMG00000022217 ##11	RPS11 (ENSPSMG00000022235) #12	FCGRT (ENSPSMG00000022254) #13	RCN3 (ENSPSMG00000022260) #14	NOSIP (ENSPSMG00000022266) #15	PRRG2 (ENSPSMG00000022274) #16	PRR12 (ENSPSMG00000022287) #17	RRAS (ENSPSMG00000022293) #18	ENSPSMG00000022320 #19	IRF3 (ENSPSMG00000022357) #20	BCL2L12 (ENSPSMG00000022396) #21	PRMT1 (ENSPSMG00000022503) #22	ENSPSMG00000022558	CPT1C (ENSPSMG00000022578) #23	TSKS (ENSPSMG00000022602) #24	AP2A1 (ENSPSMG00000022943) #25	FUZ (ENSPSMG00000023196) #26	ENSPSMG00000023201	MED25 (ENSPSMG00000023308) #28	PTOV1 (ENSPSMG00000023406) #29	PNKP (ENSPSMG00000023544) #30	AKT1S1 (ENSPSMG00000023604) #31	TBC1D17 (ENSPSMG00000000621) #32	IL4I1 (ENSPSMG00000000756) #33	NUP62 (ENSPSMG00000000766) #34	ENSPSMG00000000773
Coquerels sifaka	MODERN SPECIES	280	SLC17A7 (ENSPCOG00000026961) #7	PIH1D1 (ENSPCOG00000021089) #8	ALDH16A1 (ENSPCOG00000024480) #9	FLT3LG (ENSPCOG00000020522) #10	ENSPCOG00000023898 ##11	RPS11 (ENSPCOG00000028258) #12	FCGRT (ENSPCOG00000022052) #13	RCN3 (ENSPCOG00000015352) #14	NOSIP (ENSPCOG00000022792) #15	PRRG2 (ENSPCOG00000020752) #16	PRR12 (ENSPCOG00000027631) #17	RRAS (ENSPCOG00000018040) #18	SCAF1 (ENSPCOG00000008862) #19	ENSPCOG00000013825 #20	BCL2L12 (ENSPCOG00000026501) #21	PRMT1 (ENSPCOG00000013819) #22	ADM5 (ENSPCOG00000028667)	CPT1C (ENSPCOG00000017917) #23	TSKS (ENSPCOG00000004463) #24	AP2A1 (ENSPCOG00000025187) #25	FUZ (ENSPCOG00000026495) #26	MED25 (ENSPCOG00000014677) #28	PTOV1 (ENSPCOG00000016580) #29	PNKP (ENSPCOG00000020441) #30	AKT1S1 (ENSPCOG00000010492) #31	TBC1D17 (ENSPCOG00000016238) #32	IL4I1 (ENSPCOG00000013930) #33	ATF5 (ENSPCOG00000020223) #35	ENSPCOG00000005881	VRK3 (ENSPCOG00000014327)	ZNF473 (ENSPCOG00000016747)
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT00940000158111	ENSGT00840000130048
Tarsier	MODERN SPECIES	1818												RRAS (ENSTSYG00000011908) #18	ENSTSYG00000034509 #19	IRF3 (ENSTSYG00000001716) #20	BCL2L12 (ENSTSYG00000031723) #21	PRMT1 (ENSTSYG00000034577) #22
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Platyrrhini	ANCESTRAL SPECIES	20	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505.n.a.a #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439.h #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Mas night monkey	MODERN SPECIES	1285	SLC17A7 (ENSANAG00000036576) #7	PIH1D1 (ENSANAG00000029718) #8	ALDH16A1 (ENSANAG00000027131) #9	FLT3LG (ENSANAG00000029260) #10	ENSANAG00000030530 ##11	ENSANAG00000022898 #12	FCGRT (ENSANAG00000028290) #13	RCN3 (ENSANAG00000037039) #14	NOSIP (ENSANAG00000021786) #15	PRRG2 (ENSANAG00000035663) #16	PRR12 (ENSANAG00000034977) #17	RRAS (ENSANAG00000031347) #18	SCAF1 (ENSANAG00000016485) #19	IRF3 (ENSANAG00000032698) #20	BCL2L12 (ENSANAG00000029602) #21	PRMT1 (ENSANAG00000021704) #22	ADM5 (ENSANAG00000021656)	CPT1C (ENSANAG00000024263) #23	TSKS (ENSANAG00000020537) #24	AP2A1 (ENSANAG00000024248) #25	FUZ (ENSANAG00000037210) #26	MED25 (ENSANAG00000026898) #28	PTOV1 (ENSANAG00000035798) #29	PNKP (ENSANAG00000037187) #30	AKT1S1 (ENSANAG00000037896) #31	TBC1D17 (ENSANAG00000025223) #32	IL4I1 (ENSANAG00000037455) #33	ENSANAG00000032102	SIGLEC11 (ENSANAG00000035103)	VRK3 (ENSANAG00000036854)	ZNF473 (ENSANAG00000034634)
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505.n.a.a #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439.g #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Cebidae_a	ANCESTRAL SPECIES	20	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505.n.a.a #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439.h #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Bolivian squirrel monkey	MODERN SPECIES	169	SLC17A7 (ENSSBOG00000030154) #7	PIH1D1 (ENSSBOG00000019965) #8	ALDH16A1 (ENSSBOG00000024687) #9	FLT3LG (ENSSBOG00000021267) #10	RPL13A (ENSSBOG00000028481) ##11	RPS11 (ENSSBOG00000030203) #12	FCGRT (ENSSBOG00000030231) #13	RCN3 (ENSSBOG00000033369) #14	NOSIP (ENSSBOG00000034587) #15	PRRG2 (ENSSBOG00000024513) #16	PRR12 (ENSSBOG00000025929) #17	RRAS (ENSSBOG00000021255) #18	ENSSBOG00000027147 #19	IRF3 (ENSSBOG00000033765) #20	BCL2L12 (ENSSBOG00000024390) #21	PRMT1 (ENSSBOG00000021030) #22	ADM5 (ENSSBOG00000035636)	CPT1C (ENSSBOG00000022411) #23	TSKS (ENSSBOG00000034066) #24	AP2A1 (ENSSBOG00000022105) #25	FUZ (ENSSBOG00000025448) #26	MED25 (ENSSBOG00000029239) #28	PTOV1 (ENSSBOG00000035809) #29	PNKP (ENSSBOG00000026000) #30	AKT1S1 (ENSSBOG00000032870) #31	TBC1D17 (ENSSBOG00000029810) #32	IL4I1 (ENSSBOG00000022086) #33	ATF5 (ENSSBOG00000022597) #35	SIGLEC11 (ENSSBOG00000028282)	VRK3 (ENSSBOG00000018031)	ZNF473 (ENSSBOG00000029181)
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	478	FAM193B (ENSCCAG00000028032)	DDX41 (ENSCCAG00000036188)	DOK3 (ENSCCAG00000033574)	PDLIM7 (ENSCCAG00000036603)	DBN1 (ENSCCAG00000034373)	ENSCCAG00000037094	PRR7 (ENSCCAG00000035156)	GRK6 (ENSCCAG00000031420)	F12 (ENSCCAG00000022637)	SLC34A1 (ENSCCAG00000030954)	RGS14 (ENSCCAG00000031951)	LMAN2 (ENSCCAG00000032831)	MXD3 (ENSCCAG00000026342)	PRELID1 (ENSCCAG00000017920)	RAB24 (ENSCCAG00000032754)	ENSCCAG00000036708 #22	ENSCCAG00000028199	NSD1 (ENSCCAG00000031074)	FGFR4 (ENSCCAG00000026258)	ZNF346 (ENSCCAG00000025324)	ENSCCAG00000023454	UIMC1 (ENSCCAG00000030824)	HK3 (ENSCCAG00000027550)	UNC5A (ENSCCAG00000036150)	ENSCCAG00000024114	TSPAN17 (ENSCCAG00000028954)	EIF4E1B (ENSCCAG00000008488)	SNCB (ENSCCAG00000021013)	CDHR2 (ENSCCAG00000033098)	RNF44 (ENSCCAG00000024456)	FAF2 (ENSCCAG00000035052)
Capuchin	MODERN SPECIES	911									ENSCCAG00000021162 #15	PRRG2 (ENSCCAG00000024711) #16	PRR12 (ENSCCAG00000021246) #17	RRAS (ENSCCAG00000026694) #18	SCAF1 (ENSCCAG00000037557) #19	IRF3 (ENSCCAG00000026490) #20	BCL2L12 (ENSCCAG00000034163) #21	ENSCCAG00000036122 #22	ADM5 (ENSCCAG00000008120)
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	18	ENSCJAG00000076001	ENSCJAG00000043892	ENSCJAG00000086335	ENSCJAG00000078641	ENSCJAG00000087217	ENSCJAG00000063236	ENSCJAG00000080331	TMED3 (ENSCJAG00000005277)	ANKRD34C (ENSCJAG00000005284)	RASGRF1 (ENSCJAG00000002316)	ENSCJAG00000085127	ENSCJAG00000002305	MORF4L1 (ENSCJAG00000002214)	ADAMTS7 (ENSCJAG00000002181)	ENSCJAG00000052178	ENSCJAG00000057743 #22	AKAP13 (ENSCJAG00000009388)	KLHL25 (ENSCJAG00000021976)	ENSCJAG00000059501	ENSCJAG00000065812	ENSCJAG00000064391	ENSCJAG00000085215	ENSCJAG00000076223	ENSCJAG00000056672	ENSCJAG00000076695	ENSCJAG00000052170	ENSCJAG00000004631	IMP4 (ENSCJAG00000004623)	PTPN18 (ENSCJAG00000004585)	ENSCJAG00000011112	ARHGEF4 (ENSCJAG00000011046)
Marmoset	MODERN SPECIES	14	SLC17A7 (ENSCJAG00000000089) #7	PIH1D1 (ENSCJAG00000000084) #8	ALDH16A1 (ENSCJAG00000086591) #9	FLT3LG (ENSCJAG00000000081) #10	ENSCJAG00000000072 ##11	RPS11 (ENSCJAG00000000069) #12	FCGRT (ENSCJAG00000000066) #13	RCN3 (ENSCJAG00000000060) #14	NOSIP (ENSCJAG00000017616) #15	PRRG2 (ENSCJAG00000017641) #16	PRR12 (ENSCJAG00000017654) #17	RRAS (ENSCJAG00000003614) #18	SCAF1 (ENSCJAG00000003625) #19	IRF3 (ENSCJAG00000003637) #20	BCL2L12 (ENSCJAG00000003663) #21	ENSCJAG00000003670 #22	CPT1C (ENSCJAG00000003757) #23	TSKS (ENSCJAG00000003802) #24	AP2A1 (ENSCJAG00000003806) #25	FUZ (ENSCJAG00000003892) #26	MED25 (ENSCJAG00000003943) #28	PTOV1 (ENSCJAG00000004105) #29	PNKP (ENSCJAG00000004134) #30	AKT1S1 (ENSCJAG00000004153) #31	TBC1D17 (ENSCJAG00000043715) #32	IL4I1 (ENSCJAG00000004185) #33	ENSCJAG00000044088 #34	ATF5 (ENSCJAG00000078958) #35	SIGLEC11 (ENSCJAG00000004218)	VRK3 (ENSCJAG00000004228)	ENSCJAG00000072591
Marmoset	MODERN SPECIES	11	DNAH5 (ENSCJAG00000009326)	ENSCJAG00000072293	TRIO (ENSCJAG00000010904)	OTULINL (ENSCJAG00000010893)	OTULIN (ENSCJAG00000010884)	ANKH (ENSCJAG00000010839)	FBXL7 (ENSCJAG00000010823)	MARCHF11 (ENSCJAG00000047285)	RETREG1 (ENSCJAG00000042515)	MYO10 (ENSCJAG00000011831)	ENSCJAG00000053651	BASP1 (ENSCJAG00000046235)	ENSCJAG00000082447	ENSCJAG00000085722	ENSCJAG00000081133	ENSCJAG00000031497 #22	CDH18 (ENSCJAG00000011808)	ENSCJAG00000080182	ENSCJAG00000076231	ENSCJAG00000047554	ENSCJAG00000083660	ENSCJAG00000072646	ENSCJAG00000011760	ENSCJAG00000081189	CDH10 (ENSCJAG00000011702)	ENSCJAG00000073758	ENSCJAG00000083886	ENSCJAG00000083112	CDH9 (ENSCJAG00000007662)	ENSCJAG00000081489	CDH6 (ENSCJAG00000018954)
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.g #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Hominidae	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.g #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES	10	SLC17A7 (ENSPPYG00000010247) #7	PIH1D1 (ENSPPYG00000010248) #8	ALDH16A1 (ENSPPYG00000010249) #9	FLT3LG (ENSPPYG00000032479) #10	RPL13A (ENSPPYG00000010251) ##11	RPS11 (ENSPPYG00000025860) #12	FCGRT (ENSPPYG00000010253) #13	RCN3 (ENSPPYG00000010254) #14	ENSPPYG00000010255 #15	PRRG2 (ENSPPYG00000010256) #16	ENSPPYG00000010257 #17	ENSPPYG00000010258 #18	SCAF1 (ENSPPYG00000010259) #19	ENSPPYG00000010260 #20	BCL2L12 (ENSPPYG00000029416) #21	PRMT1 (ENSPPYG00000010261) #22	ADM5 (ENSPPYG00000038301)	CPT1C (ENSPPYG00000010527) #23	ENSPPYG00000041203	TSKS (ENSPPYG00000010538) #24	AP2A1 (ENSPPYG00000010262) #25	FUZ (ENSPPYG00000010263) #26	MED25 (ENSPPYG00000010264) #28	PTOV1 (ENSPPYG00000010265) #29	PNKP (ENSPPYG00000010266) #30	ENSPPYG00000030395	AKT1S1 (ENSPPYG00000010267) #31	TBC1D17 (ENSPPYG00000010268) #32	IL4I1 (ENSPPYG00000010269) #33	NUP62 (ENSPPYG00000010270) #34	ATF5 (ENSPPYG00000015495) #35
Orangutan	MODERN SPECIES	18	DDX41 (ENSPPYG00000016097)	DOK3 (ENSPPYG00000016096)	PDLIM7 (ENSPPYG00000016095)	DBN1 (ENSPPYG00000016094)	PRR7 (ENSPPYG00000016093)	GRK6 (ENSPPYG00000016092)	F12 (ENSPPYG00000016091)	PFN3 (ENSPPYG00000016090)	SLC34A1 (ENSPPYG00000016089)	RGS14 (ENSPPYG00000016088)	LMAN2 (ENSPPYG00000016087)	MXD3 (ENSPPYG00000032238)	PRELID1 (ENSPPYG00000016086)	RAB24 (ENSPPYG00000016085)	NSD1 (ENSPPYG00000016084)	ENSPPYG00000040539 #22	FGFR4 (ENSPPYG00000016083)	ZNF346 (ENSPPYG00000016082)	UIMC1 (ENSPPYG00000016081)	HK3 (ENSPPYG00000016080)	UNC5A (ENSPPYG00000016079)	TSPAN17 (ENSPPYG00000016078)	EIF4E1B (ENSPPYG00000016077)	SNCB (ENSPPYG00000016076)	GPRIN1 (ENSPPYG00000016075)	CDHR2 (ENSPPYG00000016152)	RNF44 (ENSPPYG00000035967)	FAF2 (ENSPPYG00000016073)	CLTB (ENSPPYG00000016072)	HIGD2A (ENSPPYG00000038024)	NOP16 (ENSPPYG00000016070)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.g #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.b	ENSGT00940000158111
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	10	SLC17A7 (ENSGGOG00000016632) #7	PIH1D1 (ENSGGOG00000016642) #8	ALDH16A1 (ENSGGOG00000010135) #9	FLT3LG (ENSGGOG00000010144) #10	RPL13A (ENSGGOG00000002932) ##11	RPS11 (ENSGGOG00000002936) #12	FCGRT (ENSGGOG00000008774) #13	RCN3 (ENSGGOG00000008781) #14	NOSIP (ENSGGOG00000007004) #15	PRRG2 (ENSGGOG00000001713) #16	ENSGGOG00000001717 #17	RRAS (ENSGGOG00000038961) #18	SCAF1 (ENSGGOG00000000495) #19	ENSGGOG00000000499 #20	ENSGGOG00000000501 #21	PRMT1 (ENSGGOG00000000503) #22	ADM5 (ENSGGOG00000022737)	CPT1C (ENSGGOG00000012237) #23	ENSGGOG00000025810	TSKS (ENSGGOG00000010134) #24	AP2A1 (ENSGGOG00000010141) #25	FUZ (ENSGGOG00000010155) #26	MED25 (ENSGGOG00000010163) #28	PNKP (ENSGGOG00000010193) #30	AKT1S1 (ENSGGOG00000010205) #31	TBC1D17 (ENSGGOG00000010211) #32	IL4I1 (ENSGGOG00000010229) #33	ENSGGOG00000039266 #35	ENSGGOG00000036915 #35	ENSGGOG00000004959	ENSGGOG00000023573
Gorilla	MODERN SPECIES	18	DDX41 (ENSGGOG00000014484)	DOK3 (ENSGGOG00000014475)	PDLIM7 (ENSGGOG00000014435)	DBN1 (ENSGGOG00000009680)	PRR7 (ENSGGOG00000009676)	GRK6 (ENSGGOG00000009669)	F12 (ENSGGOG00000009659)	PFN3 (ENSGGOG00000009641)	SLC34A1 (ENSGGOG00000009639)	RGS14 (ENSGGOG00000009632)	ENSGGOG00000003780	ENSGGOG00000022827	ENSGGOG00000011764	PRELID1 (ENSGGOG00000011762)	RAB24 (ENSGGOG00000023694)	ENSGGOG00000027930 #22	NSD1 (ENSGGOG00000011744)	FGFR4 (ENSGGOG00000002917)	ZNF346 (ENSGGOG00000015260)	UIMC1 (ENSGGOG00000017069)	HK3 (ENSGGOG00000002108)	UNC5A (ENSGGOG00000002104)	TSPAN17 (ENSGGOG00000015858)	EIF4E1B (ENSGGOG00000015854)	SNCB (ENSGGOG00000015845)	GPRIN1 (ENSGGOG00000024915)	CDHR2 (ENSGGOG00000016038)	RNF44 (ENSGGOG00000005510)	FAF2 (ENSGGOG00000005506)	CLTB (ENSGGOG00000014346)	HIGD2A (ENSGGOG00000014339)
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.g #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.a	ENSGT01080000257333.A.a.a.i.b
Human	MODERN SPECIES	10	SLC17A7 (ENSG00000104888) #7	PIH1D1 (ENSG00000104872) #8	ALDH16A1 (ENSG00000161618) #9	FLT3LG (ENSG00000090554) #10	RPL13A (ENSG00000142541) ##11	RPS11 (ENSG00000142534) #12	FCGRT (ENSG00000104870) #13	RCN3 (ENSG00000142552) #14	NOSIP (ENSG00000142546) #15	PRRG2 (ENSG00000126460) #16	PRR12 (ENSG00000126464) #17	RRAS (ENSG00000126458) #18	SCAF1 (ENSG00000126461) #19	IRF3 (ENSG00000126456) #20	BCL2L12 (ENSG00000126453) #21	PRMT1 (ENSG00000126457) #22	ADM5 (ENSG00000224420)	CPT1C (ENSG00000169169) #23	TSKS (ENSG00000126467) #24	AP2A1 (ENSG00000196961) #25	FUZ (ENSG00000010361) #26	MED25 (ENSG00000104973) #28	PTOV1 (ENSG00000104960) #29	PNKP (ENSG00000039650) #30	AKT1S1 (ENSG00000204673) #31	TBC1D17 (ENSG00000104946) #32	IL4I1 (ENSG00000104951) #33	NUP62 (ENSG00000213024) #34	ATF5 (ENSG00000169136) #35	SIGLEC11 (ENSG00000161640)	SIGLEC16 (ENSG00000161643)
Pan	ANCESTRAL SPECIES	9	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.a.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.g #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.a	ENSGT01080000257333.A.a.a.i.b
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	10	SLC17A7 (ENSPPAG00000042379) #7	PIH1D1 (ENSPPAG00000035526) #8	ALDH16A1 (ENSPPAG00000037820) #9	ENSPPAG00000020354 #10	RPL13A (ENSPPAG00000037365) ##11	RPS11 (ENSPPAG00000038695) #12	FCGRT (ENSPPAG00000043605) #13	RCN3 (ENSPPAG00000037004) #14	NOSIP (ENSPPAG00000033342) #15	PRRG2 (ENSPPAG00000009244) #16	PRR12 (ENSPPAG00000001106) #17	RRAS (ENSPPAG00000033675) #18	SCAF1 (ENSPPAG00000040154) #19	ENSPPAG00000035759 #20	ENSPPAG00000008160 #21	PRMT1 (ENSPPAG00000034989) #22	ADM5 (ENSPPAG00000038454)	CPT1C (ENSPPAG00000036321) #23	ENSPPAG00000043211	TSKS (ENSPPAG00000003064) #24	AP2A1 (ENSPPAG00000025102) #25	FUZ (ENSPPAG00000041934) #26	MED25 (ENSPPAG00000028184) #28	PTOV1 (ENSPPAG00000029476) #29	PNKP (ENSPPAG00000012210) #30	AKT1S1 (ENSPPAG00000043790) #31	TBC1D17 (ENSPPAG00000043750) #32	IL4I1 (ENSPPAG00000039884) #33	ENSPPAG00000017521 #34	ATF5 (ENSPPAG00000031606) #35	ENSPPAG00000037647
Bonobo	MODERN SPECIES	18	DDX41 (ENSPPAG00000029499)	DOK3 (ENSPPAG00000030094)	PDLIM7 (ENSPPAG00000008701)	DBN1 (ENSPPAG00000036910)	PRR7 (ENSPPAG00000039804)	ENSPPAG00000037235	GRK6 (ENSPPAG00000041029)	F12 (ENSPPAG00000015911)	PFN3 (ENSPPAG00000018574)	SLC34A1 (ENSPPAG00000030998)	RGS14 (ENSPPAG00000032723)	LMAN2 (ENSPPAG00000042088)	ENSPPAG00000035873	PRELID1 (ENSPPAG00000038319)	RAB24 (ENSPPAG00000039689)	ENSPPAG00000043919 #22	NSD1 (ENSPPAG00000012185)	FGFR4 (ENSPPAG00000037055)	ZNF346 (ENSPPAG00000031435)	UIMC1 (ENSPPAG00000035887)	HK3 (ENSPPAG00000037374)	UNC5A (ENSPPAG00000036000)	TSPAN17 (ENSPPAG00000037966)	EIF4E1B (ENSPPAG00000036530)	SNCB (ENSPPAG00000035570)	ENSPPAG00000033744	CDHR2 (ENSPPAG00000037192)	ENSPPAG00000029974	FAF2 (ENSPPAG00000041151)	ENSPPAG00000027623	HIGD2A (ENSPPAG00000037407)
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	10	SLC17A7 (ENSPTRG00000011294) #7	PIH1D1 (ENSPTRG00000011295) #8	ALDH16A1 (ENSPTRG00000011296) #9	FLT3LG (ENSPTRG00000011297) #10	RPL13A (ENSPTRG00000011298) ##11	RPS11 (ENSPTRG00000011299) #12	FCGRT (ENSPTRG00000023168) #13	RCN3 (ENSPTRG00000011303) #14	NOSIP (ENSPTRG00000011304) #15	PRRG2 (ENSPTRG00000011305) #16	PRR12 (ENSPTRG00000011306) #17	RRAS (ENSPTRG00000011307) #18	SCAF1 (ENSPTRG00000011308) #19	IRF3 (ENSPTRG00000011309) #20	BCL2L12 (ENSPTRG00000011310) #21	PRMT1 (ENSPTRG00000040282) #22	CPT1C (ENSPTRG00000011313) #23	ENSPTRG00000045479	TSKS (ENSPTRG00000011314) #24	AP2A1 (ENSPTRG00000011315) #25	FUZ (ENSPTRG00000011318) #26	MED25 (ENSPTRG00000011319) #28	PTOV1 (ENSPTRG00000011321) #29	PNKP (ENSPTRG00000011323) #30	AKT1S1 (ENSPTRG00000011326) #31	TBC1D17 (ENSPTRG00000011325) #32	IL4I1 (ENSPTRG00000034260) #33	ATF5 (ENSPTRG00000011327) #35	SIGLEC11 (ENSPTRG00000011328)	ENSPTRG00000011329	VRK3 (ENSPTRG00000011330)
Chimpanzee	MODERN SPECIES	18	DDX41 (ENSPTRG00000017589)	DOK3 (ENSPTRG00000052283)	PDLIM7 (ENSPTRG00000017587)	DBN1 (ENSPTRG00000017586)	ENSPTRG00000051755	PRR7 (ENSPTRG00000017585)	GRK6 (ENSPTRG00000045987)	F12 (ENSPTRG00000017583)	PFN3 (ENSPTRG00000045005)	SLC34A1 (ENSPTRG00000017582)	RGS14 (ENSPTRG00000017581)	LMAN2 (ENSPTRG00000017580)	MXD3 (ENSPTRG00000051004)	PRELID1 (ENSPTRG00000046505)	RAB24 (ENSPTRG00000017577)	ENSPTRG00000048377 #22	NSD1 (ENSPTRG00000017575)	FGFR4 (ENSPTRG00000017574)	ZNF346 (ENSPTRG00000017573)	UIMC1 (ENSPTRG00000017572)	HK3 (ENSPTRG00000017571)	UNC5A (ENSPTRG00000017569)	TSPAN17 (ENSPTRG00000017568)	EIF4E1B (ENSPTRG00000028481)	SNCB (ENSPTRG00000017567)	CDHR2 (ENSPTRG00000017565)	RNF44 (ENSPTRG00000017564)	FAF2 (ENSPTRG00000017563)	CLTB (ENSPTRG00000051534)	HIGD2A (ENSPTRG00000017561)	NOP16 (ENSPTRG00000017560)
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES		SLC17A7 (ENSNLEG00000005132) #7	ENSNLEG00000033852 #8	ENSNLEG00000005172 #9	ENSNLEG00000005205 #10	ENSNLEG00000005211 ##11	RPS11 (ENSNLEG00000031159) #12	ENSNLEG00000028731	RCN3 (ENSNLEG00000005216) #14	NOSIP (ENSNLEG00000005234) #15	ENSNLEG00000031889 #16	PRR12 (ENSNLEG00000005252) #17	RRAS (ENSNLEG00000005258) #18	SCAF1 (ENSNLEG00000027756) #19	ENSNLEG00000005277 #20	ENSNLEG00000005290 #21	ENSNLEG00000005306 #22	ADM5 (ENSNLEG00000031967)	ENSNLEG00000005319 #23	ENSNLEG00000005330 #24	AP2A1 (ENSNLEG00000005331) #25	FUZ (ENSNLEG00000005341) #26	ENSNLEG00000005344 #28	PTOV1 (ENSNLEG00000005374) #29	ENSNLEG00000005397 #30	AKT1S1 (ENSNLEG00000005402) #31	TBC1D17 (ENSNLEG00000005426) #32	ENSNLEG00000005468 #33	ENSNLEG00000033607 #34	ATF5 (ENSNLEG00000005470) #35	SIGLEC11 (ENSNLEG00000005475)	VRK3 (ENSNLEG00000005493)
Gibbon	MODERN SPECIES	11	DDX41 (ENSNLEG00000012844)	DOK3 (ENSNLEG00000029933)	ENSNLEG00000032504	DBN1 (ENSNLEG00000012829)	ENSNLEG00000035510	ENSNLEG00000012823	F12 (ENSNLEG00000012798)	PFN3 (ENSNLEG00000028262)	SLC34A1 (ENSNLEG00000012780)	RGS14 (ENSNLEG00000012773)	LMAN2 (ENSNLEG00000026590)	MXD3 (ENSNLEG00000033619)	PRELID1 (ENSNLEG00000012714)	RAB24 (ENSNLEG00000012697)	NSD1 (ENSNLEG00000012658)	ENSNLEG00000012692 #22	FGFR4 (ENSNLEG00000012632)	ZNF346 (ENSNLEG00000012612)	UIMC1 (ENSNLEG00000012585)	HK3 (ENSNLEG00000012572)	UNC5A (ENSNLEG00000012553)	TSPAN17 (ENSNLEG00000012538)	EIF4E1B (ENSNLEG00000012532)	SNCB (ENSNLEG00000012529)	GPRIN1 (ENSNLEG00000012526)	ENSNLEG00000012521	RNF44 (ENSNLEG00000012516)	FAF2 (ENSNLEG00000012504)	CLTB (ENSNLEG00000012503)	HIGD2A (ENSNLEG00000012501)	ENSNLEG00000012490
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.i.a #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i	ENSGT00940000158111
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n.t #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.i.a #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.e	ENSGT01080000257333.A.a.a.i.f
Vervet Monkey	MODERN SPECIES	25	GFY (ENSCSAG00000002584)	SLC17A7 (ENSCSAG00000002583) #7	PIH1D1 (ENSCSAG00000002579) #8	ALDH16A1 (ENSCSAG00000002553) #9	FLT3LG (ENSCSAG00000002539) #10	ENSCSAG00000002537 ##11	RPS11 (ENSCSAG00000002534) #12	FCGRT (ENSCSAG00000002513) #13	RCN3 (ENSCSAG00000002501) #14	NOSIP (ENSCSAG00000002499) #15	PRRG2 (ENSCSAG00000002498) #16	PRR12 (ENSCSAG00000002495) #17	RRAS (ENSCSAG00000002482) #18	SCAF1 (ENSCSAG00000002481) #19	IRF3 (ENSCSAG00000002477) #20	PRMT1 (ENSCSAG00000002474) #22	ADM5 (ENSCSAG00000002466)	CPT1C (ENSCSAG00000002461) #23	TSKS (ENSCSAG00000002454) #24	ENSCSAG00000002449 ##25	AP2A1 (ENSCSAG00000002446) #25	FUZ (ENSCSAG00000002433) #26	MED25 (ENSCSAG00000002431) #28	PTOV1 (ENSCSAG00000002427) #29	PNKP (ENSCSAG00000002422) #30	AKT1S1 (ENSCSAG00000002420) #31	TBC1D17 (ENSCSAG00000002417) #32	IL4I1 (ENSCSAG00000002414) #33	NUP62 (ENSCSAG00000019646) #34	ATF5 (ENSCSAG00000002412) #35	ENSCSAG00000002408
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n.t #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.i.a #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.e	ENSGT01080000257333.A.a.a.i.f.a
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n.t #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.i.a #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.e	ENSGT01080000257333.A.a.a.i.f.a
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	248	SLC17A7 (ENSMNEG00000036752) #7	PIH1D1 (ENSMNEG00000035306) #8	ALDH16A1 (ENSMNEG00000039451) #9	FLT3LG (ENSMNEG00000029282) #10	ENSMNEG00000034977 ##11	RPS11 (ENSMNEG00000043643) #12	FCGRT (ENSMNEG00000036913) #13	RCN3 (ENSMNEG00000031036) #14	NOSIP (ENSMNEG00000030270) #15	PRRG2 (ENSMNEG00000026492) #16	PRR12 (ENSMNEG00000032408) #17	RRAS (ENSMNEG00000032590) #18	SCAF1 (ENSMNEG00000041264) #19	IRF3 (ENSMNEG00000037326) #20	ENSMNEG00000038769 #21	PRMT1 (ENSMNEG00000007881) #22	ADM5 (ENSMNEG00000038068)	CPT1C (ENSMNEG00000042605) #23	TSKS (ENSMNEG00000034415) #24	AP2A1 (ENSMNEG00000038226) #25	FUZ (ENSMNEG00000038987) #26	MED25 (ENSMNEG00000037433) #28	PTOV1 (ENSMNEG00000037909) #29	PNKP (ENSMNEG00000034948) #30	AKT1S1 (ENSMNEG00000045467) #31	TBC1D17 (ENSMNEG00000041164) #32	NUP62 (ENSMNEG00000041582) #34	IL4I1 (ENSMNEG00000031179) #33	ATF5 (ENSMNEG00000042538) #35	SIGLEC11 (ENSMNEG00000026645)	VRK3 (ENSMNEG00000040069)
Pig-tailed macaque	MODERN SPECIES	591	PDLIM7 (ENSMNEG00000044158)	DBN1 (ENSMNEG00000029985)	PRR7 (ENSMNEG00000038350)	ENSMNEG00000006625	GRK6 (ENSMNEG00000040778)	F12 (ENSMNEG00000042192)	PFN3 (ENSMNEG00000021788)	SLC34A1 (ENSMNEG00000027032)	RGS14 (ENSMNEG00000040032)	LMAN2 (ENSMNEG00000038079)	ENSMNEG00000037932	MXD3 (ENSMNEG00000032596)	ENSMNEG00000031388	RAB24 (ENSMNEG00000008581)	NSD1 (ENSMNEG00000034939)	ENSMNEG00000035920 #22	FGFR4 (ENSMNEG00000033182)	ZNF346 (ENSMNEG00000030466)	UIMC1 (ENSMNEG00000035258)	HK3 (ENSMNEG00000030815)	UNC5A (ENSMNEG00000010438)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00410000026259	ENSGT00730000111841	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.i.a #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.e	ENSGT01080000257333.A.a.a.i.f.a
Crab-eating macaque	DUPLICATION
Crab-eating macaque	MODERN SPECIES	10	PPP1R15A (ENSMFAG00000041869)	TULP2 (ENSMFAG00000000586)	NUCB1 (ENSMFAG00000003135)	ENSMFAG00000029389	SLC6A16 (ENSMFAG00000017537)	ENSMFAG00000032972	TEAD2 (ENSMFAG00000035667)	DKKL1 (ENSMFAG00000033720)	KASH5 (ENSMFAG00000008806)	NOSIP (ENSMFAG00000031153) #15	PRRG2 (ENSMFAG00000034285) #16	RRAS (ENSMFAG00000029942) #18	ENSMFAG00000048188 #19	IRF3 (ENSMFAG00000033004) #20	BCL2L12 (ENSMFAG00000042931) #21	PRMT1 (ENSMFAG00000043429) #22	ADM5 (ENSMFAG00000029240)	CPT1C (ENSMFAG00000039271) #23	TSKS (ENSMFAG00000046167) #24	AP2A1 (ENSMFAG00000042161) #25	FUZ (ENSMFAG00000003351) #26	MED25 (ENSMFAG00000034435) #28	PTOV1 (ENSMFAG00000003953) #29	PNKP (ENSMFAG00000039622) #30	TBC1D17 (ENSMFAG00000038826) #32	IL4I1 (ENSMFAG00000001696) #33	ENSMFAG00000059650	ENSMFAG00000060114	NUP62 (ENSMFAG00000060788) #34	ATF5 (ENSMFAG00000047390) #35	ENSMFAG00000047263
Crab-eating macaque	MODERN SPECIES	16	B4GALT7 (ENSMFAG00000040618)	TMED9 (ENSMFAG00000062432)	ENSMFAG00000052305	PDLIM7 (ENSMFAG00000039384)	DBN1 (ENSMFAG00000036940)	PRR7 (ENSMFAG00000004546)	F12 (ENSMFAG00000032594)	GRK6 (ENSMFAG00000037374)	SLC34A1 (ENSMFAG00000031573)	RGS14 (ENSMFAG00000038737)	ENSMFAG00000049396	LMAN2 (ENSMFAG00000044466)	MXD3 (ENSMFAG00000033170)	PRELID1 (ENSMFAG00000003703)	RAB24 (ENSMFAG00000045651)	ENSMFAG00000044489 #22	NSD1 (ENSMFAG00000032625)	ENSMFAG00000065820	ZNF346 (ENSMFAG00000003577)	UIMC1 (ENSMFAG00000038747)	HK3 (ENSMFAG00000000149)	UNC5A (ENSMFAG00000043584)	TSPAN17 (ENSMFAG00000040265)	EIF4E1B (ENSMFAG00000031726)	SNCB (ENSMFAG00000033893)	GPRIN1 (ENSMFAG00000052966)	CDHR2 (ENSMFAG00000044762)	RNF44 (ENSMFAG00000003408)	FAF2 (ENSMFAG00000046297)	CLTB (ENSMFAG00000001544)	HIGD2A (ENSMFAG00000034686)
Rhesus	DUPLICATION
Rhesus	MODERN SPECIES	10	SLC17A7 (ENSMMUG00000014800) #7	PIH1D1 (ENSMMUG00000022116) #8	ALDH16A1 (ENSMMUG00000022117) #9	FLT3LG (ENSMMUG00000051892) #10	RPL13A (ENSMMUG00000007551) ##11	RPS11 (ENSMMUG00000007549) #12	ENSMMUG00000012273 #13	ENSMMUG00000009787 #14	NOSIP (ENSMMUG00000003819) #15	PRRG2 (ENSMMUG00000049747) #16	PRR12 (ENSMMUG00000012937) #17	RRAS (ENSMMUG00000028733) #18	SCAF1 (ENSMMUG00000012938) #19	IRF3 (ENSMMUG00000022735) #20	BCL2L12 (ENSMMUG00000003926) #21	PRMT1 (ENSMMUG00000003029) #22	ADM5 (ENSMMUG00000038407)	CPT1C (ENSMMUG00000014735) #23	TSKS (ENSMMUG00000019328) #24	AP2A1 (ENSMMUG00000011612) #25	FUZ (ENSMMUG00000011614) #26	MED25 (ENSMMUG00000020175) #28	PTOV1 (ENSMMUG00000011618) #29	PNKP (ENSMMUG00000011622) #30	AKT1S1 (ENSMMUG00000050123) #31	TBC1D17 (ENSMMUG00000011626) #32	IL4I1 (ENSMMUG00000011627) #33	NUP62 (ENSMMUG00000044817) #34	ATF5 (ENSMMUG00000054473) #35	ENSMMUG00000054052	ENSMMUG00000006385
Rhesus	MODERN SPECIES	16	FAM193B (ENSMMUG00000016910)	DDX41 (ENSMMUG00000016911)	DOK3 (ENSMMUG00000016914)	PDLIM7 (ENSMMUG00000003146)	DBN1 (ENSMMUG00000022891)	PRR7 (ENSMMUG00000064063)	GRK6 (ENSMMUG00000019817)	F12 (ENSMMUG00000019816)	PFN3 (ENSMMUG00000048792)	SLC34A1 (ENSMMUG00000019814)	RGS14 (ENSMMUG00000019807)	LMAN2 (ENSMMUG00000016192)	MXD3 (ENSMMUG00000009047)	PRELID1 (ENSMMUG00000009046)	RAB24 (ENSMMUG00000009045)	ENSMMUG00000045543 #22	NSD1 (ENSMMUG00000009041)	ZNF346 (ENSMMUG00000011033)	UIMC1 (ENSMMUG00000022838)	HK3 (ENSMMUG00000002653)	UNC5A (ENSMMUG00000002649)	TSPAN17 (ENSMMUG00000000144)	SNCB (ENSMMUG00000000137)	GPRIN1 (ENSMMUG00000013284)	CDHR2 (ENSMMUG00000013283)	RNF44 (ENSMMUG00000013282)	FAF2 (ENSMMUG00000009059)	HIGD2A (ENSMMUG00000064051)	CLTB (ENSMMUG00000009058)	NOP16 (ENSMMUG00000009317)	ARL10 (ENSMMUG00000019715)
Cercopithecinae_b	ANCESTRAL SPECIES	23	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n.t #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.j #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.e	ENSGT01080000257333.A.a.a.i.f.a
Cercopithecinae_d	ANCESTRAL SPECIES	9	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b.o.a ##11	ENSGT00390000002732.n.t #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B.i.a #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.e	ENSGT00940000158111
Sooty mangabey	DUPLICATION
Sooty mangabey	MODERN SPECIES	228	SLC17A7 (ENSCATG00000031736) #7	PIH1D1 (ENSCATG00000033857) #8	ALDH16A1 (ENSCATG00000013461) #9	FLT3LG (ENSCATG00000044584) #10	ENSCATG00000011576 ##11	RPS11 (ENSCATG00000017632) #12	FCGRT (ENSCATG00000033126) #13	RCN3 (ENSCATG00000043770) #14	NOSIP (ENSCATG00000035285) #15	PRRG2 (ENSCATG00000030138) #16	PRR12 (ENSCATG00000042487) #17	RRAS (ENSCATG00000007379) #18	SCAF1 (ENSCATG00000033591) #19	IRF3 (ENSCATG00000040122) #20	ENSCATG00000032204 #21	PRMT1 (ENSCATG00000041012) #22	ADM5 (ENSCATG00000035159)	CPT1C (ENSCATG00000039916) #23	TSKS (ENSCATG00000042464) #24	AP2A1 (ENSCATG00000032213) #25	FUZ (ENSCATG00000025834) #26	MED25 (ENSCATG00000038287) #28	PTOV1 (ENSCATG00000039521) #29	PNKP (ENSCATG00000005270) #30	AKT1S1 (ENSCATG00000035872) #31	TBC1D17 (ENSCATG00000028104) #32	IL4I1 (ENSCATG00000044547) #33	NUP62 (ENSCATG00000043873) #34	ATF5 (ENSCATG00000035954) #35	ENSCATG00000029997	VRK3 (ENSCATG00000029992)
Sooty mangabey	MODERN SPECIES	597	DOK3 (ENSCATG00000037776)	PDLIM7 (ENSCATG00000024115)	DBN1 (ENSCATG00000045329)	ENSCATG00000045069	PRR7 (ENSCATG00000040623)	GRK6 (ENSCATG00000038151)	F12 (ENSCATG00000038105)	PFN3 (ENSCATG00000013439)	SLC34A1 (ENSCATG00000031182)	RGS14 (ENSCATG00000043483)	ENSCATG00000035180	LMAN2 (ENSCATG00000038623)	ENSCATG00000029483	ENSCATG00000037450	RAB24 (ENSCATG00000037953)	ENSCATG00000029485 #22	NSD1 (ENSCATG00000040716)	FGFR4 (ENSCATG00000037961)	ZNF346 (ENSCATG00000032030)	UIMC1 (ENSCATG00000040662)	HK3 (ENSCATG00000038402)	UNC5A (ENSCATG00000037088)	TSPAN17 (ENSCATG00000039640)	EIF4E1B (ENSCATG00000036544)	SNCB (ENSCATG00000043800)	CDHR2 (ENSCATG00000014184)	RNF44 (ENSCATG00000032061)	FAF2 (ENSCATG00000010027)	CLTB (ENSCATG00000035676)	HIGD2A (ENSCATG00000025158)	ENSCATG00000035739
Drill	DUPLICATION
Drill	MODERN SPECIES	1474							FCGRT (ENSMLEG00000033629) #13	RCN3 (ENSMLEG00000040337) #14	NOSIP (ENSMLEG00000030997) #15	PRRG2 (ENSMLEG00000037265) #16	PRR12 (ENSMLEG00000038331) #17	RRAS (ENSMLEG00000025479) #18	ENSMLEG00000039318 #19	IRF3 (ENSMLEG00000039544) #20	BCL2L12 (ENSMLEG00000032456) #21	PRMT1 (ENSMLEG00000042235) #22	ADM5 (ENSMLEG00000030240)	CPT1C (ENSMLEG00000036401) #23	TSKS (ENSMLEG00000001267) #24	AP2A1 (ENSMLEG00000000293) #25	FUZ (ENSMLEG00000035864) #26	MED25 (ENSMLEG00000034559) #28	PTOV1 (ENSMLEG00000044329) #29	PNKP (ENSMLEG00000031000) #30	AKT1S1 (ENSMLEG00000042173) #31	TBC1D17 (ENSMLEG00000018341) #32	IL4I1 (ENSMLEG00000030060) #33	NUP62 (ENSMLEG00000029810) #34	ATF5 (ENSMLEG00000043879) #35	SIGLEC11 (ENSMLEG00000036078)	VRK3 (ENSMLEG00000037694)
Drill	MODERN SPECIES	1026	DOK3 (ENSMLEG00000042954)	PDLIM7 (ENSMLEG00000032748)	DBN1 (ENSMLEG00000031701)	ENSMLEG00000009504	GRK6 (ENSMLEG00000031968)	F12 (ENSMLEG00000033059)	PFN3 (ENSMLEG00000024951)	SLC34A1 (ENSMLEG00000038092)	RGS14 (ENSMLEG00000039146)	LMAN2 (ENSMLEG00000030995)	ENSMLEG00000039033	ENSMLEG00000033838	ENSMLEG00000033984	RAB24 (ENSMLEG00000033634)	NSD1 (ENSMLEG00000038162)	ENSMLEG00000039729 #22	FGFR4 (ENSMLEG00000027975)	ZNF346 (ENSMLEG00000041138)	UIMC1 (ENSMLEG00000042432)	HK3 (ENSMLEG00000032002)	UNC5A (ENSMLEG00000036853)	TSPAN17 (ENSMLEG00000036441)	EIF4E1B (ENSMLEG00000037281)	SNCB (ENSMLEG00000029935)	GPRIN1 (ENSMLEG00000016237)	CDHR2 (ENSMLEG00000027084)	RNF44 (ENSMLEG00000038802)	FAF2 (ENSMLEG00000005577)	CLTB (ENSMLEG00000042205)	HIGD2A (ENSMLEG00000035593)	ENSMLEG00000039634
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES	12	SLC17A7 (ENSPANG00000020841) #7	PIH1D1 (ENSPANG00000017749) #8	ALDH16A1 (ENSPANG00000017969) #9	FLT3LG (ENSPANG00000008127) #10	ENSPANG00000012050 ##11	ENSPANG00000012512 #12	FCGRT (ENSPANG00000012030) #13	RCN3 (ENSPANG00000002525) #14	NOSIP (ENSPANG00000010475) #15	PRRG2 (ENSPANG00000017531) #16	PRR12 (ENSPANG00000012511) #17	RRAS (ENSPANG00000015923) #18	SCAF1 (ENSPANG00000008801) #19	IRF3 (ENSPANG00000014697) #20	ENSPANG00000017968 #21	PRMT1 (ENSPANG00000021846) #22	ADM5 (ENSPANG00000013470)	CPT1C (ENSPANG00000019475) #23	TSKS (ENSPANG00000012509) #24	AP2A1 (ENSPANG00000012049) #25	FUZ (ENSPANG00000012029) #26	MED25 (ENSPANG00000015922) #28	PTOV1 (ENSPANG00000008535) #29	PNKP (ENSPANG00000014926) #30	AKT1S1 (ENSPANG00000012799) #31	TBC1D17 (ENSPANG00000006388) #32	IL4I1 (ENSPANG00000007273) #33	NUP62 (ENSPANG00000004839) #34	ATF5 (ENSPANG00000024418) #35	ENSPANG00000008418	ENSPANG00000012798
Olive baboon	MODERN SPECIES	15	FAM193B (ENSPANG00000013568)	DDX41 (ENSPANG00000012013)	DOK3 (ENSPANG00000005512)	PDLIM7 (ENSPANG00000009298)	DBN1 (ENSPANG00000002421)	PRR7 (ENSPANG00000013254)	GRK6 (ENSPANG00000020835)	F12 (ENSPANG00000008365)	PFN3 (ENSPANG00000042137)	SLC34A1 (ENSPANG00000014008)	RGS14 (ENSPANG00000011467)	LMAN2 (ENSPANG00000013182)	MXD3 (ENSPANG00000007888)	PRELID1 (ENSPANG00000001623)	RAB24 (ENSPANG00000011857)	ENSPANG00000013856 #22	NSD1 (ENSPANG00000016763)	FGFR4 (ENSPANG00000012360)	ZNF346 (ENSPANG00000023732)	UIMC1 (ENSPANG00000010403)	HK3 (ENSPANG00000002753)	UNC5A (ENSPANG00000011858)	TSPAN17 (ENSPANG00000014775)	SNCB (ENSPANG00000014009)	GPRIN1 (ENSPANG00000009510)	CDHR2 (ENSPANG00000046548)	RNF44 (ENSPANG00000009299)	FAF2 (ENSPANG00000012854)	CLTB (ENSPANG00000047891)	HIGD2A (ENSPANG00000041635)	NOP16 (ENSPANG00000013926)
Rhinopithecus	ANCESTRAL SPECIES	32	ENSGT00940000156333	ENSGT00940000161724	ENSGT00940000159626	ENSGT00940000159431	ENSGT00950000183109.c.a.b	ENSGT00940000158544	ENSGT00940000161657	ENSGT00940000153664.A.b.b	ENSGT00950000183177.a.a.a.a	ENSGT00940000161364	ENSGT00910000147002	ENSGT00940000158355	ENSGT00940000161050	ENSGT00950000182810.B.a.x.a.a	ENSGT00910000144316	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.a.i.g	ENSGT01080000257333.A.a.a.i.h
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	775	GDPD5 (ENSRBIG00000037527)	KLHL35 (ENSRBIG00000036873)	RPS3 (ENSRBIG00000044916)	ARRB1 (ENSRBIG00000041523)	SLCO2B1 (ENSRBIG00000035476)	ENSRBIG00000037921	OR2AT4 (ENSRBIG00000036161)	ENSRBIG00000043933	NEU3 (ENSRBIG00000040960)	ENSRBIG00000011964	XRRA1 (ENSRBIG00000036115)	RNF169 (ENSRBIG00000035895)	CHRDL2 (ENSRBIG00000028182)	ENSRBIG00000044531	ENSRBIG00000011853	ENSRBIG00000001091 #22	LIPT2 (ENSRBIG00000031912)	PGM2L1 (ENSRBIG00000043298)	ENSRBIG00000002437	P4HA3 (ENSRBIG00000034204)	PPME1 (ENSRBIG00000032741)	C2CD3 (ENSRBIG00000036054)	UCP3 (ENSRBIG00000032946)	UCP2 (ENSRBIG00000028444)	DNAJB13 (ENSRBIG00000032641)	PAAF1 (ENSRBIG00000041686)	ENSRBIG00000025698	MUC17 (ENSRBIG00000029632)
Black snub-nosed monkey	MODERN SPECIES	697	SLC17A7 (ENSRBIG00000007433) #7	PIH1D1 (ENSRBIG00000035363) #8	ALDH16A1 (ENSRBIG00000040057) #9	FLT3LG (ENSRBIG00000037282) #10	RPL13A (ENSRBIG00000044737) ##11	ENSRBIG00000041174 #12	FCGRT (ENSRBIG00000017955) #13	RCN3 (ENSRBIG00000022285) #14	ENSRBIG00000000401 #15	PRRG2 (ENSRBIG00000002898) #16	PRR12 (ENSRBIG00000029709) #17	RRAS (ENSRBIG00000044344) #18	ENSRBIG00000040700 #19	IRF3 (ENSRBIG00000030363) #20	ENSRBIG00000035712 #21	PRMT1 (ENSRBIG00000037391) #22	ADM5 (ENSRBIG00000034258)	CPT1C (ENSRBIG00000034255) #23	TSKS (ENSRBIG00000043641) #24	AP2A1 (ENSRBIG00000032858) #25	FUZ (ENSRBIG00000038573) #26	MED25 (ENSRBIG00000029607) #28	ENSRBIG00000040867 #29	PNKP (ENSRBIG00000020340) #30	AKT1S1 (ENSRBIG00000029566) #31	TBC1D17 (ENSRBIG00000033207) #32	NUP62 (ENSRBIG00000042837) #34	IL4I1 (ENSRBIG00000034055) #33	ENSRBIG00000015084	ENSRBIG00000041518	VRK3 (ENSRBIG00000028015)
Black snub-nosed monkey	MODERN SPECIES	1265	DOK3 (ENSRBIG00000025895)	PDLIM7 (ENSRBIG00000042113)	DBN1 (ENSRBIG00000011350)	PRR7 (ENSRBIG00000037351)	GRK6 (ENSRBIG00000028971)	F12 (ENSRBIG00000028576)	PFN3 (ENSRBIG00000012393)	SLC34A1 (ENSRBIG00000035848)	RGS14 (ENSRBIG00000030533)	LMAN2 (ENSRBIG00000033748)	ENSRBIG00000031338	ENSRBIG00000037715	PRELID1 (ENSRBIG00000033622)	RAB24 (ENSRBIG00000036872)	NSD1 (ENSRBIG00000032789)	ENSRBIG00000044399 #22	FGFR4 (ENSRBIG00000036359)	ZNF346 (ENSRBIG00000036149)	UIMC1 (ENSRBIG00000040207)	HK3 (ENSRBIG00000036655)	UNC5A (ENSRBIG00000040983)	TSPAN17 (ENSRBIG00000029629)	EIF4E1B (ENSRBIG00000039242)	SNCB (ENSRBIG00000040936)	CDHR2 (ENSRBIG00000043564)	RNF44 (ENSRBIG00000040552)	FAF2 (ENSRBIG00000003159)	CLTB (ENSRBIG00000020625)	HIGD2A (ENSRBIG00000040150)	ENSRBIG00000038060	ARL10 (ENSRBIG00000030159)
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	1304	GDPD5 (ENSRROG00000032119)	KLHL35 (ENSRROG00000042922)	RPS3 (ENSRROG00000009870)	ARRB1 (ENSRROG00000037258)	SLCO2B1 (ENSRROG00000029185)	ENSRROG00000038845	OR2AT4 (ENSRROG00000042697)	ENSRROG00000007318	NEU3 (ENSRROG00000029086)	ENSRROG00000009662	XRRA1 (ENSRROG00000038284)	RNF169 (ENSRROG00000034271)	CHRDL2 (ENSRROG00000029406)	ENSRROG00000041045	ENSRROG00000031930	ENSRROG00000040083 #22	ENSRROG00000018216	LIPT2 (ENSRROG00000044982)	KCNE3 (ENSRROG00000008117)	PGM2L1 (ENSRROG00000035061)	ENSRROG00000025736	P4HA3 (ENSRROG00000030733)	PPME1 (ENSRROG00000031513)	C2CD3 (ENSRROG00000036372)	UCP3 (ENSRROG00000035931)	UCP2 (ENSRROG00000026780)	DNAJB13 (ENSRROG00000026626)	PAAF1 (ENSRROG00000044104)	MRPL48 (ENSRROG00000043160)	RAB6A (ENSRROG00000042103)	PLEKHB1 (ENSRROG00000029271)
Golden snub-nosed monkey	MODERN SPECIES	1464	SLC17A7 (ENSRROG00000043166) #7	PIH1D1 (ENSRROG00000042187) #8	ALDH16A1 (ENSRROG00000044736) #9	FLT3LG (ENSRROG00000041379) #10	ENSRROG00000042976 ##11	RPS11 (ENSRROG00000045541) #12	FCGRT (ENSRROG00000010492) #13	RCN3 (ENSRROG00000041003) #14	NOSIP (ENSRROG00000030583) #15	PRRG2 (ENSRROG00000034623) #16	PRR12 (ENSRROG00000034505) #17	RRAS (ENSRROG00000019886) #18	SCAF1 (ENSRROG00000038280) #19	IRF3 (ENSRROG00000033700) #20	ENSRROG00000042358 #21	PRMT1 (ENSRROG00000039426) #22	ADM5 (ENSRROG00000042548)	CPT1C (ENSRROG00000029606) #23	TSKS (ENSRROG00000036981) #24	AP2A1 (ENSRROG00000039730) #25	FUZ (ENSRROG00000037776) #26	MED25 (ENSRROG00000029134) #28	ENSRROG00000044939 #29	PNKP (ENSRROG00000043361) #30	AKT1S1 (ENSRROG00000039479) #31	TBC1D17 (ENSRROG00000041781) #32	IL4I1 (ENSRROG00000038621) #33	NUP62 (ENSRROG00000030340) #34	ENSRROG00000040093 #35	ENSRROG00000043506	ENSRROG00000045623
Golden snub-nosed monkey	MODERN SPECIES	2578	DDX41 (ENSRROG00000035750)	DOK3 (ENSRROG00000033646)	PDLIM7 (ENSRROG00000000790)	DBN1 (ENSRROG00000033190)	PRR7 (ENSRROG00000039628)	GRK6 (ENSRROG00000045754)	F12 (ENSRROG00000018768)	PFN3 (ENSRROG00000023781)	SLC34A1 (ENSRROG00000030317)	RGS14 (ENSRROG00000039090)	ENSRROG00000035517	LMAN2 (ENSRROG00000038934)	MXD3 (ENSRROG00000027476)	PRELID1 (ENSRROG00000038848)	RAB24 (ENSRROG00000038828)	ENSRROG00000035420 #22	NSD1 (ENSRROG00000033718)	FGFR4 (ENSRROG00000042700)	ZNF346 (ENSRROG00000037944)	UIMC1 (ENSRROG00000031295)	HK3 (ENSRROG00000036956)	UNC5A (ENSRROG00000029106)	TSPAN17 (ENSRROG00000039469)	EIF4E1B (ENSRROG00000042084)	SNCB (ENSRROG00000038785)	CDHR2 (ENSRROG00000033344)	RNF44 (ENSRROG00000043491)	FAF2 (ENSRROG00000002721)	CLTB (ENSRROG00000041657)	ENSRROG00000039570	ENSRROG00000043701
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Eulipotyphla	ANCESTRAL SPECIES	122														ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24
Hedgehog	MODERN SPECIES	2551																ENSEEUG00000013386 #22
Common shrew	MODERN SPECIES	1875														IRF3 (ENSSARG00000006248) #20	BCL2L12 (ENSSARG00000006262) #21	PRMT1 (ENSSARG00000006282) #22	CPT1C (ENSSARG00000006297) #23	TSKS (ENSSARG00000006350) #24	ENSSARG00000006362 #26
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Camelidae	ANCESTRAL SPECIES	40	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439.d #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111	ENSGT00840000130048
Arabian camel	MODERN SPECIES	35	SLC17A7 (ENSCDRG00005006915) #7	PIH1D1 (ENSCDRG00005006995) #8	ALDH16A1 (ENSCDRG00005007092) #9	FLT3LG (ENSCDRG00005007423) #10	ENSCDRG00005007454 ##11	RPS11 (ENSCDRG00005007529) #12	FCGRT (ENSCDRG00005007612) #13	RCN3 (ENSCDRG00005007659) #14	NOSIP (ENSCDRG00005007735) #15	PRRG2 (ENSCDRG00005007833) #16	ENSCDRG00005007865 #17	RRAS (ENSCDRG00005007942) #18	ENSCDRG00005008031 #19	IRF3 (ENSCDRG00005008089) #20	BCL2L12 (ENSCDRG00005008265) #21	PRMT1 (ENSCDRG00005008397) #22	ENSCDRG00005008537	CPT1C (ENSCDRG00005008587) #23	TSKS (ENSCDRG00005008834) #24	AP2A1 (ENSCDRG00005008977) #25	FUZ (ENSCDRG00005009177) #26	MED25 (ENSCDRG00005009307) #28	PTOV1 (ENSCDRG00005009693) #29	PNKP (ENSCDRG00005009984) #30	AKT1S1 (ENSCDRG00005010128) #31	TBC1D17 (ENSCDRG00005010291) #32	IL4I1 (ENSCDRG00005010762) #33	NUP62 (ENSCDRG00005010815) #34	ENSCDRG00005010927	VRK3 (ENSCDRG00005011211)	ZNF473 (ENSCDRG00005011477)
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00940000153096.b.c.b.a.b.a	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00940000153096.b.c.b.a.b.a	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a
Narwhal	MODERN SPECIES	296	SLC17A7 (ENSMMNG00015003297) #7	PIH1D1 (ENSMMNG00015003335) #8	ALDH16A1 (ENSMMNG00015003418) #9	ENSMMNG00015003557 #10	ENSMMNG00015003578 ##11	ENSMMNG00015003626 #12	FCGRT (ENSMMNG00015003661) #13	RCN3 (ENSMMNG00015003695) #14	NOSIP (ENSMMNG00015003722) #15	PRRG2 (ENSMMNG00015003734) #16	PRR12 (ENSMMNG00015003767) #17	RRAS (ENSMMNG00015003824) #18	SCAF1 (ENSMMNG00015003847) #19	IRF3 (ENSMMNG00015003876) #20	BCL2L12 (ENSMMNG00015005053) #21	PRMT1 (ENSMMNG00015005090) #22	ENSMMNG00015005132	CPT1C (ENSMMNG00015005146) #23	ENSMMNG00015005171	TSKS (ENSMMNG00015005180) #24	AP2A1 (ENSMMNG00015005214) #25	FUZ (ENSMMNG00015005271) #26	MED25 (ENSMMNG00015005365) #28	PNKP (ENSMMNG00015005451) #30	AKT1S1 (ENSMMNG00015005500) #31	TBC1D17 (ENSMMNG00015005552) #32	IL4I1 (ENSMMNG00015005634) #33	NUP62 (ENSMMNG00015005672) #34	ATF5 (ENSMMNG00015005682) #35	ENSMMNG00015005704	VRK3 (ENSMMNG00015005758)
Beluga whale	MODERN SPECIES	14	PIH1D1 (ENSDLEG00000005667) #8	ALDH16A1 (ENSDLEG00000005644) #9	FLT3LG (ENSDLEG00000005583) #10	RPL13A (ENSDLEG00000005530) ##11	RPS11 (ENSDLEG00000005522) #12	FCGRT (ENSDLEG00000005485) #13	RCN3 (ENSDLEG00000005474) #14	ENSDLEG00000005466 #15	PRRG2 (ENSDLEG00000005453) #16	PRR12 (ENSDLEG00000005433) #17	RRAS (ENSDLEG00000005402) #18	SCAF1 (ENSDLEG00000005393) #19	IRF3 (ENSDLEG00000005363) #20	BCL2L12 (ENSDLEG00000005332) #21	ENSDLEG00000005326	PRMT1 (ENSDLEG00000005316) #22	ADM5 (ENSDLEG00000005309)	CPT1C (ENSDLEG00000004382) #23	ENSDLEG00000004185	ENSDLEG00000004141 #24	ENSDLEG00000004131 ##25	ENSDLEG00000004126	ENSDLEG00000004071 #24	AP2A1 (ENSDLEG00000003833) #25	FUZ (ENSDLEG00000003745) #26	MED25 (ENSDLEG00000003671) #28	PTOV1 (ENSDLEG00000003560) #29	PNKP (ENSDLEG00000003526) #30	AKT1S1 (ENSDLEG00000003508) #31	TBC1D17 (ENSDLEG00000003382) #32	IL4I1 (ENSDLEG00000003333) #33
Dolphin	MODERN SPECIES	3246	SLC17A7 (ENSTTRG00000005430) #7	PIH1D1 (ENSTTRG00000005448) #8	ALDH16A1 (ENSTTRG00000005455) #9	FLT3LG (ENSTTRG00000005474) #10	ENSTTRG00000005485 ##11	RPS11 (ENSTTRG00000005495) #12	FCGRT (ENSTTRG00000005500) #13	RCN3 (ENSTTRG00000005508) #14	NOSIP (ENSTTRG00000005514) #15	PRRG2 (ENSTTRG00000005516) #16	ENSTTRG00000005519 #17	RRAS (ENSTTRG00000005524) #18	SCAF1 (ENSTTRG00000005527) #19	IRF3 (ENSTTRG00000005531) #20	BCL2L12 (ENSTTRG00000005533) #21	PRMT1 (ENSTTRG00000005537) #22	CPT1C (ENSTTRG00000005539) #23	TSKS (ENSTTRG00000005542) #24	AP2A1 (ENSTTRG00000005545) #25	FUZ (ENSTTRG00000005547) #26
Sperm whale	MODERN SPECIES	8	CCER2 (ENSPCTG00005009554)	NFKBIB (ENSPCTG00005009602)	SIRT2 (ENSPCTG00005009688)	RINL (ENSPCTG00005009967)	HNRNPL (ENSPCTG00005010149)	ECH1 (ENSPCTG00005010195)	LGALS4 (ENSPCTG00005010249)	LGALS7B (ENSPCTG00005010368)	ENSPCTG00005010400	PRR12 (ENSPCTG00005010439) #17	RRAS (ENSPCTG00005010605) #18	ENSPCTG00005010658 #19	ENSPCTG00005010678 #19	IRF3 (ENSPCTG00005010716) #20	BCL2L12 (ENSPCTG00005010802) #21	PRMT1 (ENSPCTG00005010926) #22	ADM5 (ENSPCTG00005011058)	CPT1C (ENSPCTG00005011091) #23	TSKS (ENSPCTG00005011160) #24	ENSPCTG00005011263 #25	ENSPCTG00005011339	PPFIA3 (ENSPCTG00005011438)	LIN7B (ENSPCTG00005012071)	SNRNP70 (ENSPCTG00005009001)	KCNA7 (ENSPCTG00005009040)	KCNA7 (ENSPCTG00005009073)	ENSPCTG00005009089	RUVBL2 (ENSPCTG00005009123)	GYS1 (ENSPCTG00005009316)	BAX (ENSPCTG00005009439)	ENSPCTG00005009590
Blue whale	MODERN SPECIES	10	GFY (ENSBMSG00010014599)	SLC17A7 (ENSBMSG00010014462) #7	PIH1D1 (ENSBMSG00010014378) #8	ALDH16A1 (ENSBMSG00010014229) #9	FLT3LG (ENSBMSG00010014045) #10	ENSBMSG00010021476 ##11	RPS11 (ENSBMSG00010021462) #12	FCGRT (ENSBMSG00010021425) #13	RCN3 (ENSBMSG00010021418) #14	NOSIP (ENSBMSG00010021409) #15	PRRG2 (ENSBMSG00010021396) #16	PRR12 (ENSBMSG00010021379) #17	RRAS (ENSBMSG00010021366) #18	SCAF1 (ENSBMSG00010021355) #19	IRF3 (ENSBMSG00010021347) #20	PRMT1 (ENSBMSG00010021258) #22	ENSBMSG00010021213	CPT1C (ENSBMSG00010021196) #23	TSKS (ENSBMSG00010021176) #24	AP2A1 (ENSBMSG00010021155) #25	FUZ (ENSBMSG00010021113) #26	MED25 (ENSBMSG00010021075) #28	PTOV1 (ENSBMSG00010021043) #29	PNKP (ENSBMSG00010021012) #30	AKT1S1 (ENSBMSG00010020985) #31	TBC1D17 (ENSBMSG00010020938) #32	IL4I1 (ENSBMSG00010020882) #33	NUP62 (ENSBMSG00010020840) #34	ATF5 (ENSBMSG00010020834) #35	VRK3 (ENSBMSG00010020803)	ZNF473 (ENSBMSG00010020773)
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	353	ENSMMSG00000009400	ENSMMSG00000009441	SP140 (ENSMMSG00000009514)	ENSMMSG00000009672	ENSMMSG00000009643	CAB39 (ENSMMSG00000009724)	ITM2C (ENSMMSG00000009765)	GPR55 (ENSMMSG00000009994)	ENSMMSG00000010028	C2orf72 (ENSMMSG00000010077)	ENSMMSG00000010102	PSMD1 (ENSMMSG00000010125)	HTR2B (ENSMMSG00000010245)	ARMC9 (ENSMMSG00000010272)	B3GNT7 (ENSMMSG00000010494)	ENSMMSG00000010521 #22	ENSMMSG00000010637	NMUR1 (ENSMMSG00000010684)	ENSMMSG00000010724	PDE6D (ENSMMSG00000010813)	COPS7B (ENSMMSG00000010858)	ENSMMSG00000010908	NPPC (ENSMMSG00000010923)	DIS3L2 (ENSMMSG00000010947)	ENSMMSG00000011007	ENSMMSG00000011032	ENSMMSG00000011054	ENSMMSG00000011102	ENSMMSG00000011117	ENSMMSG00000011160	ENSMMSG00000011207
Siberian musk deer	MODERN SPECIES	124	PIH1D1 (ENSMMSG00000003162) #8	ALDH16A1 (ENSMMSG00000003049) #9	ENSMMSG00000002991 #10	ENSMMSG00000002918 ##11	ENSMMSG00000002892 #12	ENSMMSG00000002876 #18	FCGRT (ENSMMSG00000002863) #13	RCN3 (ENSMMSG00000002846) #14	NOSIP (ENSMMSG00000002827) #15	PRRG2 (ENSMMSG00000002800) #16	PRR12 (ENSMMSG00000002678) #17	RRAS (ENSMMSG00000002634) #18	SCAF1 (ENSMMSG00000002608) #19	IRF3 (ENSMMSG00000002560) #20	BCL2L12 (ENSMMSG00000002524) #21	ENSMMSG00000002440 #22	ENSMMSG00000002408	CPT1C (ENSMMSG00000002363) #23	TSKS (ENSMMSG00000002323) #24	AP2A1 (ENSMMSG00000002265) #25	FUZ (ENSMMSG00000002233) #26	MED25 (ENSMMSG00000002159) #28	PTOV1 (ENSMMSG00000002088) #29	PNKP (ENSMMSG00000002008) #30	AKT1S1 (ENSMMSG00000001973) #31	TBC1D17 (ENSMMSG00000001847) #32	IL4I1 (ENSMMSG00000001798) #33	NUP62 (ENSMMSG00000001784) #34	ATF5 (ENSMMSG00000001770) #35	ENSMMSG00000001743	VRK3 (ENSMMSG00000001666)
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Goat	DUPLICATION
Goat	MODERN SPECIES	9	PIH1D1 (ENSCHIG00000025674) #8	ALDH16A1 (ENSCHIG00000022106) #9	FLT3LG (ENSCHIG00000013222) #10	ENSCHIG00000021732 ##11	RPS11 (ENSCHIG00000027213) #12	FCGRT (ENSCHIG00000024609) #13	RCN3 (ENSCHIG00000010966) #14	NOSIP (ENSCHIG00000024881) #15	PRRG2 (ENSCHIG00000023430) #16	ENSCHIG00000027043 #17	ENSCHIG00000012558 #17	RRAS (ENSCHIG00000025071) #18	SCAF1 (ENSCHIG00000019580) #19	IRF3 (ENSCHIG00000017942) #20	BCL2L12 (ENSCHIG00000014818) #21	PRMT1 (ENSCHIG00000014997) #22	ENSCHIG00000016069	CPT1C (ENSCHIG00000025275) #23	TSKS (ENSCHIG00000018371) #24	AP2A1 (ENSCHIG00000025129) #25	FUZ (ENSCHIG00000021495) #26	MED25 (ENSCHIG00000008085) #28	PTOV1 (ENSCHIG00000009929) #29	PNKP (ENSCHIG00000023637) #30	AKT1S1 (ENSCHIG00000026415) #31	TBC1D17 (ENSCHIG00000020513) #32	IL4I1 (ENSCHIG00000014204) #33	NUP62 (ENSCHIG00000012083) #34	ATF5 (ENSCHIG00000017188) #35	VRK3 (ENSCHIG00000017552)	ZNF473 (ENSCHIG00000009646)
Goat	MODERN SPECIES	11	SP110 (ENSCHIG00000013385)	ENSCHIG00000023219	ENSCHIG00000011406	ENSCHIG00000023550	ENSCHIG00000016805	CAB39 (ENSCHIG00000024432)	ITM2C (ENSCHIG00000019713)	GPR55 (ENSCHIG00000016307)	SPATA3 (ENSCHIG00000024389)	C2orf72 (ENSCHIG00000014816)	HTR2B (ENSCHIG00000026300)	ENSCHIG00000018038	PSMD1 (ENSCHIG00000017071)	ARMC9 (ENSCHIG00000013895)	B3GNT7 (ENSCHIG00000024123)	ENSCHIG00000017014 #22	ENSCHIG00000010894	NMUR1 (ENSCHIG00000022412)	PDE6D (ENSCHIG00000008236)	COPS7B (ENSCHIG00000009807)	NPPC (ENSCHIG00000021412)	ENSCHIG00000013797	DIS3L2 (ENSCHIG00000022192)	ENSCHIG00000012063	ENSCHIG00000025249	ENSCHIG00000025753	ENSCHIG00000024942	ENSCHIG00000020345	ENSCHIG00000009791	ECEL1 (ENSCHIG00000008360)	PRSS56 (ENSCHIG00000006707)
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	5	SLC17A7 (ENSOARG00020022623) #7	PIH1D1 (ENSOARG00020022711) #8	ALDH16A1 (ENSOARG00020022768) #9	FLT3LG (ENSOARG00020022954) #10	ENSOARG00020022981 ##11	RPS11 (ENSOARG00020009205) #12	FCGRT (ENSOARG00020009245) #13	RCN3 (ENSOARG00020009363) #14	NOSIP (ENSOARG00020009405) #15	PRRG2 (ENSOARG00020009444) #16	PRR12 (ENSOARG00020009487) #17	RRAS (ENSOARG00020009655) #18	SCAF1 (ENSOARG00020009687) #19	IRF3 (ENSOARG00020009726) #20	BCL2L12 (ENSOARG00020009833) #21	PRMT1 (ENSOARG00020009967) #22	ENSOARG00020010309	CPT1C (ENSOARG00020010351) #23	TSKS (ENSOARG00020010412) #24	AP2A1 (ENSOARG00020010527) #25	FUZ (ENSOARG00020010715) #26	MED25 (ENSOARG00020010912) #28	PTOV1 (ENSOARG00020011240) #29	PNKP (ENSOARG00020011554) #30	AKT1S1 (ENSOARG00020011932) #31	TBC1D17 (ENSOARG00020012020) #32	IL4I1 (ENSOARG00020012301) #33	NUP62 (ENSOARG00020012515) #34	ATF5 (ENSOARG00020012533) #35	ENSOARG00020012572	VRK3 (ENSOARG00020012729)
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020009265	ENSOARG00020009400	ENSOARG00020009482	ENSOARG00020009511	ENSOARG00020009545	CAB39 (ENSOARG00020009580)	ITM2C (ENSOARG00020009671)	GPR55 (ENSOARG00020010161)	SPATA3 (ENSOARG00020010184)	C2orf72 (ENSOARG00020010235)	PSMD1 (ENSOARG00020010355)	HTR2B (ENSOARG00020010696)	ENSOARG00020010779	ARMC9 (ENSOARG00020010823)	B3GNT7 (ENSOARG00020011135)	ENSOARG00020011186 #22	ENSOARG00020011332	NMUR1 (ENSOARG00020011405)	PTMA (ENSOARG00020011440)	PDE6D (ENSOARG00020011528)	COPS7B (ENSOARG00020011620)	NPPC (ENSOARG00020011896)	DIS3L2 (ENSOARG00020011931)	ENSOARG00020012043	ENSOARG00020012112	ENSOARG00020012262	ENSOARG00020012579	ENSOARG00020015111	ENSOARG00020015541	ENSOARG00020016422	ECEL1 (ENSOARG00020016557)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
American bison	MODERN SPECIES	3201	PTH2 (ENSBBBG00000010316)	GFY (ENSBBBG00000010311)	SLC17A7 (ENSBBBG00000001775) #7	ALDH16A1 (ENSBBBG00000008431) #9	FLT3LG (ENSBBBG00000000042) #10	ENSBBBG00000000077 ##11	RPS11 (ENSBBBG00000000112) #12	FCGRT (ENSBBBG00000000126) #13	RCN3 (ENSBBBG00000000135) #14	ENSBBBG00000007115 #15	PRRG2 (ENSBBBG00000001739) #16	PRR12 (ENSBBBG00000010246) #17	ENSBBBG00000001733 #19	ENSBBBG00000010184 #20	BCL2L12 (ENSBBBG00000010166) #21	PRMT1 (ENSBBBG00000010142) #22	ENSBBBG00000010104	CPT1C (ENSBBBG00000010097) #23	TSKS (ENSBBBG00000010082) #24	AP2A1 (ENSBBBG00000010075) #25	FUZ (ENSBBBG00000010049) #26	MED25 (ENSBBBG00000010023) #28	PTOV1 (ENSBBBG00000010000) #29	PNKP (ENSBBBG00000009989) #30	TBC1D17 (ENSBBBG00000009959) #32	IL4I1 (ENSBBBG00000009938) #33	NUP62 (ENSBBBG00000009933) #34	ATF5 (ENSBBBG00000009930) #35	ENSBBBG00000009909	VRK3 (ENSBBBG00000009862)	ENSBBBG00000009834
Bos	ANCESTRAL SPECIES	4	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.h.b #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Bos_b	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.h.b #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Cow	MODERN SPECIES	9	PIH1D1 (ENSBTAG00000016526) #8	ALDH16A1 (ENSBTAG00000000330) #9	FLT3LG (ENSBTAG00000038045) #10	RPL13A (ENSBTAG00000005296) ##11	RPS11 (ENSBTAG00000013924) #12	FCGRT (ENSBTAG00000013926) #13	RCN3 (ENSBTAG00000021799) #14	NOSIP (ENSBTAG00000014450) #15	PRRG2 (ENSBTAG00000030563) #16	PRR12 (ENSBTAG00000014454) #17	ENSBTAG00000049577 #17	RRAS (ENSBTAG00000020983) #18	SCAF1 (ENSBTAG00000006612) #19	IRF3 (ENSBTAG00000006633) #20	BCL2L12 (ENSBTAG00000006638) #21	PRMT1 (ENSBTAG00000006646) #22	ENSBTAG00000049114	CPT1C (ENSBTAG00000012205) #23	TSKS (ENSBTAG00000019179) #24	AP2A1 (ENSBTAG00000019180) #25	FUZ (ENSBTAG00000019183) #26	MED25 (ENSBTAG00000008518) #28	PTOV1 (ENSBTAG00000030578) #29	PNKP (ENSBTAG00000001834) #30	AKT1S1 (ENSBTAG00000005763) #31	TBC1D17 (ENSBTAG00000047035) #32	IL4I1 (ENSBTAG00000005766) #33	NUP62 (ENSBTAG00000050948) #34	ATF5 (ENSBTAG00000003457) #35	ENSBTAG00000016997	VRK3 (ENSBTAG00000005367)
Hybrid Bos Indicus	MODERN SPECIES	9	SLC17A7 (ENSBIXG00005027991) #7	PIH1D1 (ENSBIXG00005028016) #8	ALDH16A1 (ENSBIXG00005028107) #9	FLT3LG (ENSBIXG00005028193) #10	ENSBIXG00005028251 ##11	RPS11 (ENSBIXG00005028282) #12	FCGRT (ENSBIXG00005004878) #13	RCN3 (ENSBIXG00005028407) #14	NOSIP (ENSBIXG00005028444) #15	PRRG2 (ENSBIXG00005028454) #16	PRR12 (ENSBIXG00005028496) #17	RRAS (ENSBIXG00005028511) #18	SCAF1 (ENSBIXG00005028526) #19	IRF3 (ENSBIXG00005006544) #20	BCL2L12 (ENSBIXG00005028650) #21	PRMT1 (ENSBIXG00005028768) #22	CPT1C (ENSBIXG00005028794) #23	TSKS (ENSBIXG00005005006) #24	AP2A1 (ENSBIXG00005028858) #25	FUZ (ENSBIXG00005005035) #26	MED25 (ENSBIXG00005029006) #28	PNKP (ENSBIXG00005001965) #30	AKT1S1 (ENSBIXG00005029090) #31	TBC1D17 (ENSBIXG00005005183) #32	IL4I1 (ENSBIXG00005005205) #33	NUP62 (ENSBIXG00005001804) #34	ATF5 (ENSBIXG00005001786) #35	ENSBIXG00005001776	VRK3 (ENSBIXG00005001640)	ENSBIXG00005001604	ENSBIXG00005011925
Bos_a	ANCESTRAL SPECIES	16	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a.h.b #19	ENSGT00950000183205.b.a.b.a.a.h.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Wild yak	MODERN SPECIES	1730	SLC17A7 (ENSBMUG00000003053) #7	PIH1D1 (ENSBMUG00000003075) #8	ALDH16A1 (ENSBMUG00000003395) #9	FLT3LG (ENSBMUG00000003574) #10	ENSBMUG00000003651 ##11	ENSBMUG00000003690	FCGRT (ENSBMUG00000003733) #13	RCN3 (ENSBMUG00000003756) #14	NOSIP (ENSBMUG00000003881) #15	PRRG2 (ENSBMUG00000003914) #16	PRR12 (ENSBMUG00000003983) #17	RRAS (ENSBMUG00000004017) #18	ENSBMUG00000004158 #19	IRF3 (ENSBMUG00000004245) #20	BCL2L12 (ENSBMUG00000004304) #21	PRMT1 (ENSBMUG00000004375) #22	ENSBMUG00000004408	CPT1C (ENSBMUG00000004440) #23	TSKS (ENSBMUG00000004483) #24	AP2A1 (ENSBMUG00000004532) #25	FUZ (ENSBMUG00000004591) #26	MED25 (ENSBMUG00000004720) #28	PTOV1 (ENSBMUG00000004841) #29	ENSBMUG00000004888 #30	ENSBMUG00000004900 #31	TBC1D17 (ENSBMUG00000005003) #32	NUP62 (ENSBMUG00000005054) #34	ATF5 (ENSBMUG00000005063) #35	ENSBMUG00000005072	VRK3 (ENSBMUG00000005187)	ENSBMUG00000005224
Domestic yak	MODERN SPECIES	12	FLT3LG (ENSBGRG00000014021) #10	ENSBGRG00000024407 ##11	ENSBGRG00000024351 #12	FCGRT (ENSBGRG00000024262) #13	RCN3 (ENSBGRG00000024220) #14	ENSBGRG00000024196	NOSIP (ENSBGRG00000024116) #15	ENSBGRG00000024046 #16	ENSBGRG00000024015 #17	ENSBGRG00000023926 #17	RRAS (ENSBGRG00000023868) #18	ENSBGRG00000023836 #19	ENSBGRG00000023762 #19	IRF3 (ENSBGRG00000023684) #20	BCL2L12 (ENSBGRG00000023636) #21	PRMT1 (ENSBGRG00000023312) #22	ENSBGRG00000023243	CPT1C (ENSBGRG00000023169) #23	TSKS (ENSBGRG00000023079) #24	AP2A1 (ENSBGRG00000022434) #25	FUZ (ENSBGRG00000022030) #26	MED25 (ENSBGRG00000021696) #28	PTOV1 (ENSBGRG00000021493) #29	PNKP (ENSBGRG00000021234) #30	AKT1S1 (ENSBGRG00000021121) #31	TBC1D17 (ENSBGRG00000020970) #32	IL4I1 (ENSBGRG00000020877) #33	NUP62 (ENSBGRG00000020834) #34	ATF5 (ENSBGRG00000020773) #35	ENSBGRG00000020747	VRK3 (ENSBGRG00000020286)
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	27	SLC17A7 (ENSCHYG00000002123) #7	PIH1D1 (ENSCHYG00000002157) #8	ALDH16A1 (ENSCHYG00000002223) #9	FLT3LG (ENSCHYG00000002465) #10	ENSCHYG00000002487 ##11	ENSCHYG00000002522	FCGRT (ENSCHYG00000002532) #13	RCN3 (ENSCHYG00000002553) #14	NOSIP (ENSCHYG00000002580) #15	PRRG2 (ENSCHYG00000002598) #16	PRR12 (ENSCHYG00000002616) #17	RRAS (ENSCHYG00000002642) #18	SCAF1 (ENSCHYG00000002660) #19	IRF3 (ENSCHYG00000002693) #20	BCL2L12 (ENSCHYG00000002735) #21	ENSCHYG00000002791 #22	ENSCHYG00000002874	CPT1C (ENSCHYG00000002891) #23	TSKS (ENSCHYG00000002916) #24	AP2A1 (ENSCHYG00000002955) #25	FUZ (ENSCHYG00000003042) #26	MED25 (ENSCHYG00000003152) #28	PTOV1 (ENSCHYG00000003241) #29	PNKP (ENSCHYG00000003327) #30	AKT1S1 (ENSCHYG00000003373) #31	TBC1D17 (ENSCHYG00000003408) #32	IL4I1 (ENSCHYG00000003457) #33	NUP62 (ENSCHYG00000003473) #34	ENSCHYG00000003487	ENSCHYG00000003506	VRK3 (ENSCHYG00000003577)
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000011802	ENSCHYG00000011782	ENSCHYG00000011732	ENSCHYG00000011704	ENSCHYG00000011597	ENSCHYG00000011559	CAB39 (ENSCHYG00000011507)	ENSCHYG00000011164	GPR55 (ENSCHYG00000011133)	SPATA3 (ENSCHYG00000011102)	C2orf72 (ENSCHYG00000011056)	HTR2B (ENSCHYG00000011019)	PSMD1 (ENSCHYG00000010484)	ARMC9 (ENSCHYG00000009411)	B3GNT7 (ENSCHYG00000009299)	ENSCHYG00000009172 #22	ENSCHYG00000021122	NMUR1 (ENSCHYG00000021055)	PTMA (ENSCHYG00000020863)	PDE6D (ENSCHYG00000020773)	COPS7B (ENSCHYG00000020525)	NPPC (ENSCHYG00000020448)	DIS3L2 (ENSCHYG00000020131)	ENSCHYG00000020061	ENSCHYG00000020024	ENSCHYG00000019940	ECEL1 (ENSCHYG00000019662)	PRSS56 (ENSCHYG00000019425)	CHRND (ENSCHYG00000019299)	CHRNG (ENSCHYG00000019022)	EIF4E2 (ENSCHYG00000018635)
Suina	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a.i ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Pig	MODERN SPECIES	14	SLC17A7 (ENSSSCG00000003170) #7	PIH1D1 (ENSSSCG00000003169) #8	ALDH16A1 (ENSSSCG00000003168) #9	FLT3LG (ENSSSCG00000034448) #10	ENSSSCG00000052671 ##11	RPS11 (ENSSSCG00000003165) #12	FCGRT (ENSSSCG00000003187) #13	RCN3 (ENSSSCG00000024823) #14	NOSIP (ENSSSCG00000029154) #15	PRRG2 (ENSSSCG00000003161) #16	ENSSSCG00000032668 #17	RRAS (ENSSSCG00000003183) #18	SCAF1 (ENSSSCG00000038807) #19	IRF3 (ENSSSCG00000003178) #20	ENSSSCG00000003177	PRMT1 (ENSSSCG00000003189) #22	CPT1C (ENSSSCG00000024872) #23	TSKS (ENSSSCG00000003191) #24	AP2A1 (ENSSSCG00000003199) #25	FUZ (ENSSSCG00000003198) #26	MED25 (ENSSSCG00000003197) #28	PTOV1 (ENSSSCG00000003196) #29	PNKP (ENSSSCG00000003195) #30	AKT1S1 (ENSSSCG00000003194) #31	TBC1D17 (ENSSSCG00000003193) #32	IL4I1 (ENSSSCG00000003192) #33	NUP62 (ENSSSCG00000040333) #34	ATF5 (ENSSSCG00000003201) #35	VRK3 (ENSSSCG00000003204)	ZNF473 (ENSSSCG00000037710)	IZUMO2 (ENSSSCG00000003207)
Chacoan peccary	MODERN SPECIES	799	SLC17A7 (ENSCWAG00000005787) #7	PIH1D1 (ENSCWAG00000005886) #8	ALDH16A1 (ENSCWAG00000005930) #9	FLT3LG (ENSCWAG00000006205) #10	ENSCWAG00000006241 ##11	RPS11 (ENSCWAG00000006295) #12	FCGRT (ENSCWAG00000006333) #13	RCN3 (ENSCWAG00000006394) #14	NOSIP (ENSCWAG00000006413) #15	PRRG2 (ENSCWAG00000006438) #16	PRR12 (ENSCWAG00000006486) #17	RRAS (ENSCWAG00000006558) #18	SCAF1 (ENSCWAG00000006581) #19	IRF3 (ENSCWAG00000006610) #20	BCL2L12 (ENSCWAG00000006662) #21	PRMT1 (ENSCWAG00000006728) #22	ADM5 (ENSCWAG00000006802)	CPT1C (ENSCWAG00000006842) #23	TSKS (ENSCWAG00000007022) #24	AP2A1 (ENSCWAG00000007063) #25	FUZ (ENSCWAG00000007131) #26	MED25 (ENSCWAG00000007240) #28	PTOV1 (ENSCWAG00000007356) #29
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Mustelinae	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Ferret	MODERN SPECIES	291	SLC17A7 (ENSMPUG00000002665) #7	PIH1D1 (ENSMPUG00000002657) #8	ALDH16A1 (ENSMPUG00000002650) #9	FLT3LG (ENSMPUG00000002613) #10	RPL13A (ENSMPUG00000002604) ##11	RPS11 (ENSMPUG00000002599) #12	FCGRT (ENSMPUG00000002596) #13	RCN3 (ENSMPUG00000002591) #14	NOSIP (ENSMPUG00000002583) #15	PRRG2 (ENSMPUG00000002578) #16	PRR12 (ENSMPUG00000002538) #17	RRAS (ENSMPUG00000002515) #18	SCAF1 (ENSMPUG00000002481) #19	IRF3 (ENSMPUG00000002477) #20	BCL2L12 (ENSMPUG00000002461) #21	PRMT1 (ENSMPUG00000002401) #22	CPT1C (ENSMPUG00000002399) #23	TSKS (ENSMPUG00000002382) #24	AP2A1 (ENSMPUG00000002373) #25	FUZ (ENSMPUG00000002370) #26	MED25 (ENSMPUG00000002366) #28	PTOV1 (ENSMPUG00000002341) #29	PNKP (ENSMPUG00000002313) #30	AKT1S1 (ENSMPUG00000002307) #31	TBC1D17 (ENSMPUG00000002304) #32	IL4I1 (ENSMPUG00000002299) #33	NUP62 (ENSMPUG00000019361) #34	ATF5 (ENSMPUG00000002298) #35	ENSMPUG00000002294	VRK3 (ENSMPUG00000002289)	ZNF473 (ENSMPUG00000002288)
American mink	MODERN SPECIES	135	SLC17A7 (ENSNVIG00000013475) #7	PIH1D1 (ENSNVIG00000013493) #8	A16A1 (ENSNVIG00000013514) #9	FLT3LG (ENSNVIG00000013636) #10	RPL13A (ENSNVIG00000013662) ##11	RPS11 (ENSNVIG00000013696) #12	FCGRT (ENSNVIG00000013729) #13	RCN3 (ENSNVIG00000013791) #14	NOSIP (ENSNVIG00000013805) #15	TMG2 (ENSNVIG00000013836) #16	PRR12 (ENSNVIG00000013877) #17	RRAS (ENSNVIG00000013892) #18	SCAF1 (ENSNVIG00000013902) #19	IRF3 (ENSNVIG00000013916) #20	BCL2L12 (ENSNVIG00000013961) #21	PRMT1 (ENSNVIG00000013974) #22	ENSNVIG00000014029	CPT1C (ENSNVIG00000014042) #23	ENSNVIG00000014121	TSKS (ENSNVIG00000014153) #24	AP2A1 (ENSNVIG00000014173) #25	FUZ (ENSNVIG00000014236) #26	MED25 (ENSNVIG00000014280) #28	PNKP (ENSNVIG00000014465) #30	AKT1S1 (ENSNVIG00000014694) #31	TBC1D17 (ENSNVIG00000014744) #32	IL4I1 (ENSNVIG00000014846) #33	NUP62 (ENSNVIG00000014915) #34	ATF5 (ENSNVIG00000014925) #35	ENSNVIG00000014945	VRK3 (ENSNVIG00000015072)
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154700.pc #22
Giant Panda	MODERN SPECIES	709																ENSAMEG00000025561 #22
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00940000154700.qc.a #22
Giant Panda	MODERN SPECIES	1352																ENSAMEG00000027277 #22
Ursidae	ANCESTRAL SPECIES	30	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700.qc.b #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397.k #31	ENSGT00390000017397.l #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a
Giant Panda	MODERN SPECIES	3	SLC17A7 (ENSAMEG00000014111) #7	PIH1D1 (ENSAMEG00000014098) #8	ALDH16A1 (ENSAMEG00000014055) #9	ENSAMEG00000014041 #10	RPL13A (ENSAMEG00000014027) ##11	RPS11 (ENSAMEG00000014020) #12	ENSAMEG00000013998 #13	NOSIP (ENSAMEG00000013962) #15	RCN3 (ENSAMEG00000013976) #14	ENSAMEG00000013954 #16	PRR12 (ENSAMEG00000029999) #17	RRAS (ENSAMEG00000013931) #18	ENSAMEG00000013914 #19	IRF3 (ENSAMEG00000013892) #20	BCL2L12 (ENSAMEG00000013888) #21	PRMT1 (ENSAMEG00000013871) #22	ENSAMEG00000026436	CPT1C (ENSAMEG00000013819) #23	TSKS (ENSAMEG00000013807) #24	AP2A1 (ENSAMEG00000013743) #25	FUZ (ENSAMEG00000013731) #26	MED25 (ENSAMEG00000013694) #28	PTOV1 (ENSAMEG00000013684) #29	PNKP (ENSAMEG00000013669) #30	ENSAMEG00000031095 #31	TBC1D17 (ENSAMEG00000013612) #32	IL4I1 (ENSAMEG00000013573) #33	ENSAMEG00000025338 #34	ENSAMEG00000013546	ENSAMEG00000013521	ZNF473 (ENSAMEG00000013519)
Ursus	ANCESTRAL SPECIES	13	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700.qc.b #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397.k #31	ENSGT00390000017397.l #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Polar bear	MODERN SPECIES	115	KASH5 (ENSUMAG00000001846)	SLC17A7 (ENSUMAG00000001869) #7	PIH1D1 (ENSUMAG00000001943) #8	ALDH16A1 (ENSUMAG00000001975) #9	FLT3LG (ENSUMAG00000002372) #10	ENSUMAG00000002385 ##11	RPS11 (ENSUMAG00000002394) #12	FCGRT (ENSUMAG00000002401) #13	RCN3 (ENSUMAG00000002431) #14	ENSUMAG00000002445 #15	ENSUMAG00000002454 #17	RRAS (ENSUMAG00000002464) #18	ENSUMAG00000002553 #19	IRF3 (ENSUMAG00000002587) #20	BCL2L12 (ENSUMAG00000002590) #21	PRMT1 (ENSUMAG00000002599) #22	ENSUMAG00000002609	CPT1C (ENSUMAG00000002617) #23	TSKS (ENSUMAG00000002694) #24	AP2A1 (ENSUMAG00000003074) #25	FUZ (ENSUMAG00000007031) #26	MED25 (ENSUMAG00000007065) #28	PNKP (ENSUMAG00000007091) #30	ENSUMAG00000007269 #31	TBC1D17 (ENSUMAG00000007279) #32	ATF5 (ENSUMAG00000007299) #35	ENSUMAG00000007305	VRK3 (ENSUMAG00000007311)	ZNF473 (ENSUMAG00000007322)	ENSUMAG00000007331	ENSUMAG00000007333
American black bear	DUPLICATION
American black bear	MODERN SPECIES	256									NOSIP (ENSUAMG00000007336) #15	PRRG2 (ENSUAMG00000007342) #16	PRR12 (ENSUAMG00000007347) #17	RRAS (ENSUAMG00000007370) #18	ENSUAMG00000007371 #19	IRF3 (ENSUAMG00000007393) #20	BCL2L12 (ENSUAMG00000007401) #21	ENSUAMG00000007446 #22	ENSUAMG00000007447	CPT1C (ENSUAMG00000007449) #23	TSKS (ENSUAMG00000007453) #24
American black bear	MODERN SPECIES	582														TLR8 (ENSUAMG00000026707)	TLR7 (ENSUAMG00000026706)	ENSUAMG00000026705 #22	PRPS2 (ENSUAMG00000026704)	FRMPD4 (ENSUAMG00000026702)
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n.qb #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989.j #32	ENSGT00940000158989.i #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a
Red fox	MODERN SPECIES	101	SLC17A7 (ENSVVUG00000022638) #7	PIH1D1 (ENSVVUG00000022633) #8	ALDH16A1 (ENSVVUG00000022622) #9	FLT3LG (ENSVVUG00000022614) #10	RPL13A (ENSVVUG00000022597) ##11	RPS11 (ENSVVUG00000022590) #12	FCGRT (ENSVVUG00000022578) #13	RCN3 (ENSVVUG00000022571) #14	PRRG2 (ENSVVUG00000022563) #16	NOSIP (ENSVVUG00000022560) #15	PRR12 (ENSVVUG00000022528) #17	RRAS (ENSVVUG00000022504) #18	SCAF1 (ENSVVUG00000022453) #19	IRF3 (ENSVVUG00000022435) #20	BCL2L12 (ENSVVUG00000022403) #21	PRMT1 (ENSVVUG00000021435) #22	ADM5 (ENSVVUG00000021360)	CPT1C (ENSVVUG00000021351) #23	TSKS (ENSVVUG00000021336) #24	AP2A1 (ENSVVUG00000021313) #25	FUZ (ENSVVUG00000021304) #26	MED25 (ENSVVUG00000021296) #28	PTOV1 (ENSVVUG00000021273) #29	PNKP (ENSVVUG00000020724) #30	ENSVVUG00000020673 #32	AKT1S1 (ENSVVUG00000020665) #31	ENSVVUG00000020411 #32	IL4I1 (ENSVVUG00000020406) #33	ATF5 (ENSVVUG00000020402) #35	ENSVVUG00000020400	VRK3 (ENSVVUG00000020352)
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.b.b ##11	ENSGT00390000002732.n.qb #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989.j #32	ENSGT00940000158989.i #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a
Dingo	MODERN SPECIES	125	SLC17A7 (ENSCAFG00020025100) #7	PIH1D1 (ENSCAFG00020025087) #8	ALDH16A1 (ENSCAFG00020024960) #9	ENSCAFG00020024917 ##11	RPS11 (ENSCAFG00020024909) #12	FCGRT (ENSCAFG00020024896) #13	RCN3 (ENSCAFG00020024895) #14	NOSIP (ENSCAFG00020024889) #15	PRRG2 (ENSCAFG00020024886) #16	ENSCAFG00020024885 #17	ENSCAFG00020024884 #17	RRAS (ENSCAFG00020024879) #18	ENSCAFG00020024859 #19	IRF3 (ENSCAFG00020024853) #20	BCL2L12 (ENSCAFG00020024844) #21	PRMT1 (ENSCAFG00020024443) #22	ADM5 (ENSCAFG00020024378)	CPT1C (ENSCAFG00020023872) #23	TSKS (ENSCAFG00020023817) #24	AP2A1 (ENSCAFG00020023376) #25	FUZ (ENSCAFG00020023265) #26	MED25 (ENSCAFG00020023185) #28	PTOV1 (ENSCAFG00020023177) #29	PNKP (ENSCAFG00020023058) #30	AKT1S1 (ENSCAFG00020023033) #31	TBC1D17 (ENSCAFG00020022343) #32	IL4I1 (ENSCAFG00020022292) #33	NUP62 (ENSCAFG00020022287) #34	ATF5 (ENSCAFG00020022286) #35	ENSCAFG00020022275	VRK3 (ENSCAFG00020022253)
Dog	DUPLICATION
Dog	MODERN SPECIES		SLC17A7 (ENSCAFG00845024908) #7	PIH1D1 (ENSCAFG00845024664) #8	ALDH16A1 (ENSCAFG00845024360) #9	FLT3LG (ENSCAFG00845024253) #10	RPL13A (ENSCAFG00845024086) ##11	RPS11 (ENSCAFG00845023961) #12	FCGRT (ENSCAFG00845023878) #13	RCN3 (ENSCAFG00845023834) #14	NOSIP (ENSCAFG00845023744) #15	PRRG2 (ENSCAFG00845023671) #16	PRR12 (ENSCAFG00845023579) #17	RRAS (ENSCAFG00845023497) #18	SCAF1 (ENSCAFG00845023416) #19	IRF3 (ENSCAFG00845023315) #20	BCL2L12 (ENSCAFG00845023183) #21	PRMT1 (ENSCAFG00845022617) #22	ADM5 (ENSCAFG00845022542)	CPT1C (ENSCAFG00845022213) #23	TSKS (ENSCAFG00845022049) #24	AP2A1 (ENSCAFG00845021617) #25	FUZ (ENSCAFG00845021309) #26	MED25 (ENSCAFG00845020944) #28	PTOV1 (ENSCAFG00845020796) #29	PNKP (ENSCAFG00845020569) #30	AKT1S1 (ENSCAFG00845020448) #31	TBC1D17 (ENSCAFG00845020253) #32	NUP62 (ENSCAFG00845020207) #34	IL4I1 (ENSCAFG00845020119) #33	ATF5 (ENSCAFG00845020078) #35	ENSCAFG00845020034	VRK3 (ENSCAFG00845019785)
Dog	MODERN SPECIES	28	ADTRP (ENSCAFG00845020946)	TMEM170B (ENSCAFG00845020894)	NEDD9 (ENSCAFG00845020672)	SMIM13 (ENSCAFG00845020618)	ELOVL2 (ENSCAFG00845020568)	SYCP2L (ENSCAFG00845020401)	GCM2 (ENSCAFG00845020331)	MAK (ENSCAFG00845020065)	ENSCAFG00845019919	PAK1IP1 (ENSCAFG00845019576)	ENSCAFG00845019493	GCNT2 (ENSCAFG00845019386)	TFAP2A (ENSCAFG00845019098)	ENSCAFG00845018859	ENSCAFG00845018795	ENSCAFG00845018729 #22	SLC35B3 (ENSCAFG00845018313)	ENSCAFG00845018157	ENSCAFG00845018125	EEF1E1 (ENSCAFG00845018087)	BLOC1S5 (ENSCAFG00845018047)	ENSCAFG00845017833	BMP6 (ENSCAFG00845017586)	SNRNP48 (ENSCAFG00845017442)	DSP (ENSCAFG00845017273)	ENSCAFG00845017231	RIOK1 (ENSCAFG00845017166)	CAGE1 (ENSCAFG00845017003)	SSR1 (ENSCAFG00845016889)	RREB1 (ENSCAFG00845016516)	LY86 (ENSCAFG00845016254)
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.wb #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Cat	DUPLICATION
Cat	MODERN SPECIES	246	SLC17A7 (ENSFCAG00000023749) #7	PIH1D1 (ENSFCAG00000009191) #8	ALDH16A1 (ENSFCAG00000009193) #9	FLT3LG (ENSFCAG00000030375) #10	RPL13A (ENSFCAG00000009194) ##11	RPS11 (ENSFCAG00000009196) #12	FCGRT (ENSFCAG00000009199) #13	RCN3 (ENSFCAG00000000028) #14	NOSIP (ENSFCAG00000010497) #15	PRRG2 (ENSFCAG00000010498) #16	PRR12 (ENSFCAG00000025376) #17	RRAS (ENSFCAG00000024840) #18	SCAF1 (ENSFCAG00000045933) #19	IRF3 (ENSFCAG00000006074) #20	BCL2L12 (ENSFCAG00000034454) #21	PRMT1 (ENSFCAG00000006081) #22	ENSFCAG00000029354	CPT1C (ENSFCAG00000006084) #23	TSKS (ENSFCAG00000004426) #24	AP2A1 (ENSFCAG00000004429) #25	FUZ (ENSFCAG00000004433) #26	MED25 (ENSFCAG00000012164) #28	PTOV1 (ENSFCAG00000012170) #29	PNKP (ENSFCAG00000018550) #30	AKT1S1 (ENSFCAG00000039788) #31	TBC1D17 (ENSFCAG00000012173) #32	IL4I1 (ENSFCAG00000012174) #33	ATF5 (ENSFCAG00000045314) #35	ENSFCAG00000047261	VRK3 (ENSFCAG00000007968)	ENSFCAG00000048160
Cat	MODERN SPECIES	248	DCAF8 (ENSFCAG00000003925)	PEA15 (ENSFCAG00000003924)	CASQ1 (ENSFCAG00000003923)	ATP1A4 (ENSFCAG00000005397)	IGSF8 (ENSFCAG00000003922)	KCNJ9 (ENSFCAG00000015120)	KCNJ10 (ENSFCAG00000043392)	PIGM (ENSFCAG00000008535)	IGSF9 (ENSFCAG00000031301)	TAGLN2 (ENSFCAG00000016255)	CFAP45 (ENSFCAG00000008529)	VSIG8 (ENSFCAG00000008527)	SLAMF8 (ENSFCAG00000008526)	FCRL6 (ENSFCAG00000027611)	DUSP23 (ENSFCAG00000044162)	ENSFCAG00000031034 #22	CRP (ENSFCAG00000029168)	APCS (ENSFCAG00000010503)	OR10J4 (ENSFCAG00000023747)	ENSFCAG00000023051	OR10J3 (ENSFCAG00000029247)	FCER1A (ENSFCAG00000015276)	ACKR1 (ENSFCAG00000018619)	CADM3 (ENSFCAG00000015269)	ENSFCAG00000031916	ENSFCAG00000052900	OR6N2 (ENSFCAG00000044911)	ENSFCAG00000015615	ENSFCAG00000013455	ENSFCAG00000013454	OR6K3 (ENSFCAG00000040462)
Panthera	ANCESTRAL SPECIES	20	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n.wb #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Tiger	DUPLICATION
Tiger	MODERN SPECIES	36	SLC17A7 (ENSPTIG00000019109) #7	PIH1D1 (ENSPTIG00000019309) #8	ALDH16A1 (ENSPTIG00000020037) #9	ENSPTIG00000021950 #10	ENSPTIG00000022003 ##11	RPS11 (ENSPTIG00000002272) #12	FCGRT (ENSPTIG00000004003) #13	RCN3 (ENSPTIG00000007038) #14	ENSPTIG00000007453 #15	PRRG2 (ENSPTIG00000007792) #16	ENSPTIG00000008236 #17	RRAS (ENSPTIG00000011339) #18	ENSPTIG00000011785 #19	IRF3 (ENSPTIG00000012537) #20	ENSPTIG00000017895 #21	PRMT1 (ENSPTIG00000019080) #22	ENSPTIG00000020152	CPT1C (ENSPTIG00000020349) #23	TSKS (ENSPTIG00000006061) #24	ENSPTIG00000007548 #25	FUZ (ENSPTIG00000007760) #26	ENSPTIG00000015583 #29	ENSPTIG00000018221 #30	ENSPTIG00000018509 #32	ENSPTIG00000018814 #32	ENSPTIG00000020305 #33	NUP62 (ENSPTIG00000020841) #34	VRK3 (ENSPTIG00000021041)	ENSPTIG00000021495	ENSPTIG00000005377	IZUMO2 (ENSPTIG00000021569)
Tiger	MODERN SPECIES	15	NEDD9 (ENSPTIG00000020169)	SMIM13 (ENSPTIG00000021553)	ELOVL2 (ENSPTIG00000021641)	SYCP2L (ENSPTIG00000001094)	GCM2 (ENSPTIG00000008744)	MAK (ENSPTIG00000009730)	TMEM14C (ENSPTIG00000014497)	PAK1IP1 (ENSPTIG00000014765)	C6orf52 (ENSPTIG00000015425)	GCNT2 (ENSPTIG00000016061)	ENSPTIG00000016215	TFAP2A (ENSPTIG00000016483)	ENSPTIG00000017987	ENSPTIG00000018659	SLC35B3 (ENSPTIG00000019956)	ENSPTIG00000001180 #22	EEF1E1 (ENSPTIG00000003209)	BLOC1S5 (ENSPTIG00000006195)	TXNDC5 (ENSPTIG00000008525)	BMP6 (ENSPTIG00000009664)	SNRNP48 (ENSPTIG00000013502)	DSP (ENSPTIG00000014227)	ENSPTIG00000018301	RIOK1 (ENSPTIG00000018545)	CAGE1 (ENSPTIG00000019168)	SSR1 (ENSPTIG00000006156)	LY86 (ENSPTIG00000014095)	F13A1 (ENSPTIG00000014413)	NRN1 (ENSPTIG00000015277)	FARS2 (ENSPTIG00000016684)	LYRM4 (ENSPTIG00000018145)
Panthera_a	ANCESTRAL SPECIES	22	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.b ##11	ENSGT00390000002732.n.wb #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000114226	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
lion	DUPLICATION
lion	MODERN SPECIES	15	NKPD1 (ENSPLOG00000006206)	TRAPPC6A (ENSPLOG00000006245)	EXOC3L2 (ENSPLOG00000006300)	MARK4 (ENSPLOG00000006356)	CKM (ENSPLOG00000006406)	KLC3 (ENSPLOG00000006444)	ERCC2 (ENSPLOG00000006584)	PPP1R13L (ENSPLOG00000006777)	NOSIP (ENSPLOG00000006833) #15	PRRG2 (ENSPLOG00000006869) #16	PRR12 (ENSPLOG00000006927) #17	RRAS (ENSPLOG00000006992) #18	SCAF1 (ENSPLOG00000007025) #19	IRF3 (ENSPLOG00000007056) #20	BCL2L12 (ENSPLOG00000007139) #21	PRMT1 (ENSPLOG00000007276) #22	ENSPLOG00000007411	CPT1C (ENSPLOG00000007450) #23	TSKS (ENSPLOG00000007572) #24	AP2A1 (ENSPLOG00000007711) #25	FUZ (ENSPLOG00000007807) #26	MED25 (ENSPLOG00000008045) #28	PTOV1 (ENSPLOG00000008148) #29	PNKP (ENSPLOG00000008218) #30	AKT1S1 (ENSPLOG00000008339) #31	TBC1D17 (ENSPLOG00000008421) #32	IL4I1 (ENSPLOG00000008612) #33	NUP62 (ENSPLOG00000008706) #34	ATF5 (ENSPLOG00000008740) #35	ENSPLOG00000008795	VRK3 (ENSPLOG00000009002)
lion	MODERN SPECIES	28	ENSPLOG00000015652	ADTRP (ENSPLOG00000015607)	TMEM170B (ENSPLOG00000015571)	NEDD9 (ENSPLOG00000015418)	SMIM13 (ENSPLOG00000015335)	ELOVL2 (ENSPLOG00000015241)	SYCP2L (ENSPLOG00000014969)	GCM2 (ENSPLOG00000014873)	MAK (ENSPLOG00000014775)	TMEM14C (ENSPLOG00000014694)	PAK1IP1 (ENSPLOG00000014566)	ENSPLOG00000014487	ENSPLOG00000014364	TFAP2A (ENSPLOG00000014182)	ENSPLOG00000014020	ENSPLOG00000013926 #22	SLC35B3 (ENSPLOG00000013879)	EEF1E1 (ENSPLOG00000013833)	BLOC1S5 (ENSPLOG00000013761)	TXNDC5 (ENSPLOG00000013690)	BMP6 (ENSPLOG00000013558)	SNRNP48 (ENSPLOG00000013502)	DSP (ENSPLOG00000013167)	RIOK1 (ENSPLOG00000013095)	CAGE1 (ENSPLOG00000012826)	SSR1 (ENSPLOG00000012706)	RREB1 (ENSPLOG00000019420)	LY86 (ENSPLOG00000019367)	ENSPLOG00000019351	F13A1 (ENSPLOG00000019314)	NRN1 (ENSPLOG00000019270)
leopard	DUPLICATION
leopard	MODERN SPECIES	103	GFY (ENSPPRG00000006208)	SLC17A7 (ENSPPRG00000007058) #7	PIH1D1 (ENSPPRG00000007680) #8	ALDH16A1 (ENSPPRG00000009904) #9	FLT3LG (ENSPPRG00000010392) #10	ENSPPRG00000011265 ##11	RPS11 (ENSPPRG00000012091) #12	FCGRT (ENSPPRG00000013062) #13	RCN3 (ENSPPRG00000013222) #14	NOSIP (ENSPPRG00000014345) #15	PRRG2 (ENSPPRG00000015395) #16	RRAS (ENSPPRG00000020676) #18	SCAF1 (ENSPPRG00000023162) #19	IRF3 (ENSPPRG00000003901) #20	BCL2L12 (ENSPPRG00000006198) #21	PRMT1 (ENSPPRG00000007371) #22	ENSPPRG00000008136 #22	ENSPPRG00000008239	CPT1C (ENSPPRG00000009392) #23	TSKS (ENSPPRG00000010063) #24	AP2A1 (ENSPPRG00000012521) #25	FUZ (ENSPPRG00000015640) #26	MED25 (ENSPPRG00000001130) #28	PTOV1 (ENSPPRG00000005802) #29	PNKP (ENSPPRG00000009389) #30	AKT1S1 (ENSPPRG00000010679) #31	TBC1D17 (ENSPPRG00000012804) #32	IL4I1 (ENSPPRG00000013697) #33	ENSPPRG00000020072	VRK3 (ENSPPRG00000015169)	ENSPPRG00000015244
leopard	MODERN SPECIES	79															SLC35B3 (ENSPPRG00000006882)	ENSPPRG00000006743 #22	ENSPPRG00000005821	BLOC1S5 (ENSPPRG00000005122)	TXNDC5 (ENSPPRG00000004740)	BMP6 (ENSPPRG00000004373)	SNRNP48 (ENSPPRG00000004283)	DSP (ENSPPRG00000003684)	RIOK1 (ENSPPRG00000001932)	CAGE1 (ENSPPRG00000001510)	SSR1 (ENSPPRG00000013065)	RREB1 (ENSPPRG00000012144)	LY86 (ENSPPRG00000008801)	F13A1 (ENSPPRG00000007966)	NRN1 (ENSPPRG00000007267)	ENSPPRG00000006505	FARS2 (ENSPPRG00000006027)
leopard	MODERN SPECIES	103	SLC17A7 (ENSPPRG00000007058) #7	PIH1D1 (ENSPPRG00000007680) #8	ALDH16A1 (ENSPPRG00000009904) #9	FLT3LG (ENSPPRG00000010392) #10	ENSPPRG00000011265 ##11	RPS11 (ENSPPRG00000012091) #12	FCGRT (ENSPPRG00000013062) #13	RCN3 (ENSPPRG00000013222) #14	NOSIP (ENSPPRG00000014345) #15	PRRG2 (ENSPPRG00000015395) #16	RRAS (ENSPPRG00000020676) #18	SCAF1 (ENSPPRG00000023162) #19	IRF3 (ENSPPRG00000003901) #20	BCL2L12 (ENSPPRG00000006198) #21	PRMT1 (ENSPPRG00000007371) #22	ENSPPRG00000008136 #22	ENSPPRG00000008239	CPT1C (ENSPPRG00000009392) #23	TSKS (ENSPPRG00000010063) #24	AP2A1 (ENSPPRG00000012521) #25	FUZ (ENSPPRG00000015640) #26	MED25 (ENSPPRG00000001130) #28	PTOV1 (ENSPPRG00000005802) #29	PNKP (ENSPPRG00000009389) #30	AKT1S1 (ENSPPRG00000010679) #31	TBC1D17 (ENSPPRG00000012804) #32	IL4I1 (ENSPPRG00000013697) #33	ENSPPRG00000020072	VRK3 (ENSPPRG00000015169)	ENSPPRG00000015244	ENSPPRG00000020181
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Chiroptera	ANCESTRAL SPECIES	16	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111	ENSGT00840000130048
Megabat	MODERN SPECIES	3816	SLC17A7 (ENSPVAG00000010952) #7	PIH1D1 (ENSPVAG00000010953) #8	ALDH16A1 (ENSPVAG00000010955) #9	FLT3LG (ENSPVAG00000010957) #10	RPL13A (ENSPVAG00000010958) ##11	ENSPVAG00000010959	FCGRT (ENSPVAG00000010960) #13	RCN3 (ENSPVAG00000010961) #14	NOSIP (ENSPVAG00000010962) #15	PRRG2 (ENSPVAG00000010963) #16	PRR12 (ENSPVAG00000010965) #17	RRAS (ENSPVAG00000010966) #18	SCAF1 (ENSPVAG00000010967) #19	IRF3 (ENSPVAG00000010968) #20	BCL2L12 (ENSPVAG00000010969) #21	PRMT1 (ENSPVAG00000010970) #22	CPT1C (ENSPVAG00000010971) #23	TSKS (ENSPVAG00000010972) #24	AP2A1 (ENSPVAG00000010973) #25	FUZ (ENSPVAG00000010974) #26	MED25 (ENSPVAG00000010975) #28	PTOV1 (ENSPVAG00000010976) #29	PNKP (ENSPVAG00000010980) #30	AKT1S1 (ENSPVAG00000010983) #31	TBC1D17 (ENSPVAG00000010985) #32	IL4I1 (ENSPVAG00000010988) #33
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000010799.u.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111	ENSGT00840000130048
Greater horseshoe bat	MODERN SPECIES	6	SLC17A7 (ENSRFEG00010008954) #7	PIH1D1 (ENSRFEG00010009002) #8	ALDH16A1 (ENSRFEG00010009144) #9	FLT3LG (ENSRFEG00010009320) #10	RPL13A (ENSRFEG00010009364) ##11	ENSRFEG00010009427 #12	FCGRT (ENSRFEG00010009551) #13	RCN3 (ENSRFEG00010009608) #14	NOSIP (ENSRFEG00010009649) #15	PRRG2 (ENSRFEG00010009690) #16	PRR12 (ENSRFEG00010009738) #17	RRAS (ENSRFEG00010009871) #18	SCAF1 (ENSRFEG00010009912) #19	IRF3 (ENSRFEG00010009958) #20	BCL2L12 (ENSRFEG00010010039) #21	PRMT1 (ENSRFEG00010010147) #22	CPT1C (ENSRFEG00010010276) #23	TSKS (ENSRFEG00010010392) #24	AP2A1 (ENSRFEG00010010576) #25	FUZ (ENSRFEG00010010654) #26	MED25 (ENSRFEG00010010795) #28	PTOV1 (ENSRFEG00010011047) #29	PNKP (ENSRFEG00010011111) #30	AKT1S1 (ENSRFEG00010011184) #31	TBC1D17 (ENSRFEG00010011302) #32	IL4I1 (ENSRFEG00010011805) #33	NUP62 (ENSRFEG00010011827) #34	ATF5 (ENSRFEG00010011850) #35	ENSRFEG00010011885	VRK3 (ENSRFEG00010011933)	ZNF473 (ENSRFEG00010012054)
Microbat	DUPLICATION
Microbat	MODERN SPECIES	2646																PRMT1 (ENSMLUG00000026704) #22	ENSMLUG00000017098 #23
Microbat	MODERN SPECIES	210																ENSMLUG00000017092 #22
Equus	ANCESTRAL SPECIES	1	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a.b ##11	ENSGT00390000002732.m.a ##12	ENSGT00390000010799.u.b.a.a.a.b ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B.p.a #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT00730000112484	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737 #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111
Horse	MODERN SPECIES	1	SLC17A7 (ENSECAG00000008206) #7	PIH1D1 (ENSECAG00000021267) #8	ALDH16A1 (ENSECAG00000023437) #9	ENSECAG00000038488 #10	RPL13A (ENSECAG00000015832) ##11	RPS11 (ENSECAG00000000370) ##12	FCGRT (ENSECAG00000002855) #13	RCN3 (ENSECAG00000010512) #14	NOSIP (ENSECAG00000010590) #15	PRRG2 (ENSECAG00000011504) #16	ENSECAG00000012525 #17	RRAS (ENSECAG00000016716) #18	ENSECAG00000017909 #19	IRF3 (ENSECAG00000018265) #20	BCL2L12 (ENSECAG00000022614) #21	PRMT1 (ENSECAG00000024076) #22	CPT1C (ENSECAG00000015556) #23	TSKS (ENSECAG00000023945) #24	AP2A1 (ENSECAG00000007134) #25	FUZ (ENSECAG00000019538) #26	MED25 (ENSECAG00000008563) #28	PTOV1 (ENSECAG00000014505) #29	PNKP (ENSECAG00000017461) #30	AKT1S1 (ENSECAG00000023285) #31	TBC1D17 (ENSECAG00000000665) #32	IL4I1 (ENSECAG00000018105) #33	NUP62 (ENSECAG00000006129) #34	ATF5 (ENSECAG00000018168) #35	ENSECAG00000019222	VRK3 (ENSECAG00000020568)	ZNF473 (ENSECAG00000023381)
Donkey	MODERN SPECIES	18	PIH1D1 (ENSEASG00005004996) #8	ALDH16A1 (ENSEASG00005004997) #9	ENSEASG00005005002 #10	ENSEASG00005005007 ##11	RPS11 (ENSEASG00005034777) #12	FCGRT (ENSEASG00005005020) #13	RCN3 (ENSEASG00005005046) #14	NOSIP (ENSEASG00005005049) #15	PRRG2 (ENSEASG00005005054) #16	ENSEASG00005037867 #17	ENSEASG00005035361 #17	RRAS (ENSEASG00005005083) #18	SCAF1 (ENSEASG00005005102) #19	IRF3 (ENSEASG00005005140) #20	BCL2L12 (ENSEASG00005005229) #21	PRMT1 (ENSEASG00005005297) #22	ENSEASG00005030277	CPT1C (ENSEASG00005005975) #23	TSKS (ENSEASG00005026212) #24	AP2A1 (ENSEASG00005006948) #25	FUZ (ENSEASG00005007539) #26	MED25 (ENSEASG00005007549) #28	PTOV1 (ENSEASG00005007600) #29	PNKP (ENSEASG00005007616) #30	AKT1S1 (ENSEASG00005007647) #31	TBC1D17 (ENSEASG00005007710) #32	IL4I1 (ENSEASG00005008275) #33	NUP62 (ENSEASG00005008278) #34	ATF5 (ENSEASG00005025978) #35	ENSEASG00005023663	VRK3 (ENSEASG00005008283)
Atlantogenata	ANCESTRAL SPECIES	38	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737.i #34	ENSGT00530000063801.b #35	ENSGT01080000257333.A.a.b.a.a	ENSGT00940000158111	ENSGT00840000130048
Xenarthra	ANCESTRAL SPECIES	138	ENSGT00390000014026	ENSGT00420000029926	ENSGT00730000111841	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00390000010799.u.b.b ##11	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23
Armadillo	MODERN SPECIES	2967	DKKL1 (ENSDNOG00000039573)	KASH5 (ENSDNOG00000030659)	ENSDNOG00000040100	SLC17A7 (ENSDNOG00000017070) #7	PIH1D1 (ENSDNOG00000046437) #8	ALDH16A1 (ENSDNOG00000034701) #9	ENSDNOG00000035370 ##11	RCN3 (ENSDNOG00000035897) #14	NOSIP (ENSDNOG00000045723) #15	PRRG2 (ENSDNOG00000038223) #16	PRR12 (ENSDNOG00000041652) #17	RRAS (ENSDNOG00000041406) #18	SCAF1 (ENSDNOG00000030669) #19	IRF3 (ENSDNOG00000040858) #20	BCL2L12 (ENSDNOG00000045620) #21	PRMT1 (ENSDNOG00000035806) #22	ENSDNOG00000034266 #23
Afrotheria	ANCESTRAL SPECIES	22	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737.i #34	ENSGT00530000063801.b #35	ENSGT00960000186612.A.b	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506
Tenrec	MODERN SPECIES	2438																PRMT1 (ENSETEG00000007396) #22
Afrotheria_a	ANCESTRAL SPECIES	21	ENSGT00940000159110 #7	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799.u.b.a.a ##11	ENSGT00390000002732.n #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154318.B #21	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000161923 #29	ENSGT00940000159302 #30	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00940000161737.i #34	ENSGT00530000063801.b #35	ENSGT00960000186612.A.b	ENSGT00390000011694	ENSGT00940000157783	ENSGT00940000160506
Elephant	MODERN SPECIES	375	PTH2 (ENSLAFG00000026150)	SLC17A7 (ENSLAFG00000016196) #7	PIH1D1 (ENSLAFG00000016200) #8	ENSLAFG00000016203	FLT3LG (ENSLAFG00000016211) #10	RPL13A (ENSLAFG00000016213) ##11	RPS11 (ENSLAFG00000016217) #12	RCN3 (ENSLAFG00000011677) #14	NOSIP (ENSLAFG00000017025) #15	PRRG2 (ENSLAFG00000026190) #16	PRR12 (ENSLAFG00000016051) #17	RRAS (ENSLAFG00000028763) #18	SCAF1 (ENSLAFG00000021360) #19	IRF3 (ENSLAFG00000028074) #20	ENSLAFG00000022155 #13	PRMT1 (ENSLAFG00000018053) #22	ENSLAFG00000027232 ##23	TSKS (ENSLAFG00000016910) #24	AP2A1 (ENSLAFG00000027046) #25	FUZ (ENSLAFG00000029729) #26	MED25 (ENSLAFG00000014186) #28	PNKP (ENSLAFG00000022483) #30	TBC1D17 (ENSLAFG00000028149) #32	IL4I1 (ENSLAFG00000005731) #33	NUP62 (ENSLAFG00000020923) #34	ATF5 (ENSLAFG00000010812) #35	ENSLAFG00000001144	ENSLAFG00000023117	ENSLAFG00000003556	ENSLAFG00000031844	ENSLAFG00000022646
Hyrax	MODERN SPECIES	1982													SCAF1 (ENSPCAG00000008528) #19	IRF3 (ENSPCAG00000008633) #20	BCL2L12 (ENSPCAG00000008665) #21	PRMT1 (ENSPCAG00000008724) #22	CPT1C (ENSPCAG00000008779) #23
Marsupialia	ANCESTRAL SPECIES	27	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799 #11	ENSGT00390000002732.n.cc.b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505 #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00530000063801.b #35	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000167648	ENSGT01030000234606.a.b.d.h	ENSGT00940000160506
Opossum	MODERN SPECIES	3	ENSMODG00000013712	ENSMODG00000013699	ENSMODG00000013683 #8	ALDH16A1 (ENSMODG00000013676) #9	RPL13A (ENSMODG00000023391) #11	ENSMODG00000013434 #12	ENSMODG00000013649 #13	RCN3 (ENSMODG00000013632) #14	NOSIP (ENSMODG00000013629) #15	ENSMODG00000013620 #16	ENSMODG00000013613 #17	RRAS (ENSMODG00000037260) #18	ENSMODG00000023396	ENSMODG00000041939 #19	IRF3 (ENSMODG00000013603) #20	PRMT1 (ENSMODG00000013595) #22	ENSMODG00000013567 #23	ENSMODG00000013440 #24	FUZ (ENSMODG00000013403) #26	ENSMODG00000043953 #28	AKT1S1 (ENSMODG00000044767) #31	PNKP (ENSMODG00000013400) #30	TBC1D17 (ENSMODG00000013390) #32	IL4I1 (ENSMODG00000013380) #33	ZSWIM9 (ENSMODG00000013339)	ENSMODG00000002376	ENSMODG00000044194	ENSMODG00000013336	ENSMODG00000013311	ENSMODG00000042052	ENSMODG00000047525
Marsupialia_b	ANCESTRAL SPECIES	28	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799 #11	ENSGT00390000002732.n.cc.b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505.`b.a #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00530000063801.b #35	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000167648	ENSGT01030000234606.a.b.d.g	ENSGT01100000263521.a.b.a.b
Diprotodontia	ANCESTRAL SPECIES	45	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799 #11	ENSGT00390000002732.n.cc.b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505.`b.a #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00530000063801.b #35	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000167648	ENSGT01030000234606.a.b.d.g	ENSGT01100000263521.a.b.a.b
Diprotodontia_a	ANCESTRAL SPECIES	40	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00510000048192 #8	ENSGT00940000161135 #9	ENSGT00530000064424 #10	ENSGT00390000010799 #11	ENSGT00390000002732.n.cc.b #12	ENSGT01100000263475.d.b #13	ENSGT01010000222360.G #14	ENSGT00390000015505.`b.a #15	ENSGT00950000183084.b.a.a #16	ENSGT00440000037417.B #17	ENSGT00940000160972 #18	ENSGT00950000183205.b.a.b.a.a #19	ENSGT00940000160569 #20	ENSGT00940000154700 #22	ENSGT01060000248595.b.a.b.b #23	ENSGT00390000002611 #24	ENSGT00950000182838.A.a.a #25	ENSGT00390000010727 #26	ENSGT00940000160439 #28	ENSGT00940000159302 #30	ENSGT00390000017397 #31	ENSGT00940000158989 #32	ENSGT00940000162082 #33	ENSGT00530000063801.b #35	ENSGT00940000157783	ENSGT00390000011694	ENSGT00940000167648	ENSGT01030000234606.a.b.d.g	ENSGT01100000263521.a.b.a.b
koala	MODERN SPECIES	100	BAX (ENSPCIG00000007329)	DHDH (ENSPCIG00000007331)	TULP2 (ENSPCIG00000007335)	ENSPCIG00000007337 #8	ALDH16A1 (ENSPCIG00000007338) #9	ENSPCIG00000032295 #10	ENSPCIG00000007340 #11	RPS11 (ENSPCIG00000007352) #12	ENSPCIG00000031152 #13	RCN3 (ENSPCIG00000007365) #14	NOSIP (ENSPCIG00000007366) #15	PRR12 (ENSPCIG00000007368) #17	RRAS (ENSPCIG00000007369) #18	ENSPCIG00000032871	ENSPCIG00000007371 #20	PRMT1 (ENSPCIG00000007372) #22	CPT1C (ENSPCIG00000007931) #23	ENSPCIG00000007939	TSKS (ENSPCIG00000007950) #24	AP2A1 (ENSPCIG00000008128) #25	FUZ (ENSPCIG00000018698) #26	MED25 (ENSPCIG00000018700) #28	PNKP (ENSPCIG00000018702) #30	AKT1S1 (ENSPCIG00000018704) #31	TBC1D17 (ENSPCIG00000018722) #32	IL4I1 (ENSPCIG00000019248) #33	ATF5 (ENSPCIG00000019249) #35	LIG1 (ENSPCIG00000019250)	ENSPCIG00000031518	ENSPCIG00000019251	ENSPCIG00000019252
Common wonbat	MODERN SPECIES	908	ENSVURG00010013118	DHDH (ENSVURG00010013131)	NUCB1 (ENSVURG00010013155)	RCN3 (ENSVURG00010013165) #14	ENSVURG00010013185	ALDH16A1 (ENSVURG00010013351) #9	ENSVURG00010013365 #10	ENSVURG00010013379 #11	ENSVURG00010013585 #13	ENSVURG00010013595 #15	PRRG2 (ENSVURG00010013604) #16	ENSVURG00010013611 #17	RRAS (ENSVURG00010013618) #18	SCAF1 (ENSVURG00010013628) #19	ENSVURG00010013632 #20	PRMT1 (ENSVURG00010013644) #22	CPT1C (ENSVURG00010013715) #23	TSKS (ENSVURG00010013896) #24	AP2A1 (ENSVURG00010013930) #25	FUZ (ENSVURG00010013964) #26	ENSVURG00010013975 #28	ENSVURG00010013985 #28	ENSVURG00010014000 #30	AKT1S1 (ENSVURG00010014043) #31	TBC1D17 (ENSVURG00010014054) #32	IL4I1 (ENSVURG00010014090) #33	ATF5 (ENSVURG00010014098) #35	LIG1 (ENSVURG00010014106)	ZSWIM9 (ENSVURG00010014122)	ENSVURG00010014129	ENSVURG00010014145
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000020592	ENSSHAG00000030170	ENSSHAG00000004243	ENSSHAG00000023573 #8	ENSSHAG00000030327 #9	ENSSHAG00000021286 #11	ENSSHAG00000004834 #13	RCN3 (ENSSHAG00000029475) #14	ENSSHAG00000021649 #15	ENSSHAG00000022432 #17	ENSSHAG00000025252 #17	RRAS (ENSSHAG00000000270) #18	ENSSHAG00000030250 #19	ENSSHAG00000003813 #20	CPT1C (ENSSHAG00000023518) #23	PRMT1 (ENSSHAG00000003582) #22	TSKS (ENSSHAG00000022449) #24	ENSSHAG00000026783 #25	ENSSHAG00000028754 #25	FUZ (ENSSHAG00000025237) #26	MED25 (ENSSHAG00000031341) #28	PNKP (ENSSHAG00000029261) #30	AKT1S1 (ENSSHAG00000028868) #31	TBC1D17 (ENSSHAG00000006794) #32	IL4I1 (ENSSHAG00000031803) #33	ENSSHAG00000024753 #35	ENSSHAG00000006383	ENSSHAG00000022723	ENSSHAG00000027706	ENSSHAG00000004825	ENSSHAG00000027513
Platypus	MODERN SPECIES	1	ENSOANG00000048566	PPFIA3 (ENSOANG00000000395)	ENSOANG00000040618	TRPM4 (ENSOANG00000005782)	ENSOANG00000038288	ENSOANG00000050286 #13	RCN3 (ENSOANG00000004103) #14	NOSIP (ENSOANG00000049297) #15	ENSOANG00000037549 #16	ENSOANG00000037579 #17	ENSOANG00000041740 #17	RRAS (ENSOANG00000038998) #18	ENSOANG00000040732 #19	ENSOANG00000046499 #20	ENSOANG00000042777 #21	PRMT1 (ENSOANG00000037078) #22	ENSOANG00000051300	CPT1C (ENSOANG00000045910) #23	TSKS (ENSOANG00000047454) #24	AP2A1 (ENSOANG00000042299) #25	ENSOANG00000049102 #26	MED25 (ENSOANG00000043111) #28	PNKP (ENSOANG00000040153) #30	AKT1S1 (ENSOANG00000045466) #31	TBC1D17 (ENSOANG00000050154) #32	ENSOANG00000043628 #33	ENSOANG00000046696	LIG1 (ENSOANG00000002678)	ENSOANG00000051006 #35	ENSOANG00000049253	ENSOANG00000037864