Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000158239 #22
Gnathostomata	ANCESTRAL SPECIES	351								ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000005159 #18	ENSGT00940000168404	ENSGT00940000156444 #19	ENSGT00940000168201.a	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239 #22
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES	107	ENSGT00940000158781	ENSGT00390000015769.B	ENSGT00940000162403	ENSGT00530000063410.b	ENSGT01030000234607.A.b	ENSGT00530000063873.B	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916
Sarcopterygii	ANCESTRAL SPECIES	145	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000164225	ENSGT00940000160994	ENSGT00940000160319	ENSGT00970000198411	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000168201.a	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b
Tetrapoda	ANCESTRAL SPECIES	6	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00970000198411	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552
Amniota	ANCESTRAL SPECIES	6	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552
Mammalia	ANCESTRAL SPECIES	6	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Theria	ANCESTRAL SPECIES	5	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Eutheria	ANCESTRAL SPECIES	10	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT01090000260046
Primates	ANCESTRAL SPECIES	13	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000154319.u.b ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.j	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000000685.o.b.a ##24	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Cebidae	ANCESTRAL SPECIES	11	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.j	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000000685.o.b.a ##24	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00390000007552.f.w.b	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.j	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00390000010308.cb.b	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000000685.o.b.a ##24	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Capuchin	MODERN SPECIES	666												TMEM237 (ENSCCAG00000026654) #18	MPP4 (ENSCCAG00000020797) #19	ALS2 (ENSCCAG00000030938) #20	CDK15 (ENSCCAG00000035246) #21	FZD7 (ENSCCAG00000019867) #22	KIAA2012 (ENSCCAG00000026861) #23	ENSCCAG00000036777 #24	ENSCCAG00000023285 #25	ENSCCAG00000029661 #26
Bolivian squirrel monkey	MODERN SPECIES	56	NDUFB3 (ENSSBOG00000023814)	CFLAR (ENSSBOG00000020876)	CASP10 (ENSSBOG00000023212)	ENSSBOG00000021837	CASP8 (ENSSBOG00000027346)	FLACC1 (ENSSBOG00000032227)	ENSSBOG00000024387	TRAK2 (ENSSBOG00000027410)	STRADB (ENSSBOG00000028914)	ENSSBOG00000022018	C2CD6 (ENSSBOG00000024027)	TMEM237 (ENSSBOG00000028677) #18	MPP4 (ENSSBOG00000032446) #19	ALS2 (ENSSBOG00000026070) #20	CDK15 (ENSSBOG00000023266) #21	FZD7 (ENSSBOG00000013896) #22	KIAA2012 (ENSSBOG00000034494) #23	ENSSBOG00000030624 ##26	NOP58 (ENSSBOG00000020494)	ENSSBOG00000029881	BMPR2 (ENSSBOG00000025318)	ENSSBOG00000016073	ICA1L (ENSSBOG00000032973)	WDR12 (ENSSBOG00000015132)	CARF (ENSSBOG00000032523)	NBEAL1 (ENSSBOG00000032563)	ENSSBOG00000030482 ##24	CYP20A1 (ENSSBOG00000025384)	ABI2 (ENSSBOG00000031443)	RAPH1 (ENSSBOG00000036069)	ENSSBOG00000030839
Marmoset	MODERN SPECIES	18	PPIL3 (ENSCJAG00000041811)	NIF3L1 (ENSCJAG00000004400)	ORC2 (ENSCJAG00000004465)	NDUFB3 (ENSCJAG00000004496)	ENSCJAG00000004505	CASP10 (ENSCJAG00000004540)	CASP8 (ENSCJAG00000004551)	FLACC1 (ENSCJAG00000004558)	TRAK2 (ENSCJAG00000004568)	STRADB (ENSCJAG00000004661)	C2CD6 (ENSCJAG00000004698)	TMEM237 (ENSCJAG00000004720) #18	MPP4 (ENSCJAG00000004750) #19	ALS2 (ENSCJAG00000004769) #20	CDK15 (ENSCJAG00000004892) #21	FZD7 (ENSCJAG00000038346) #22	KIAA2012 (ENSCJAG00000004923) #23	ENSCJAG00000047154 ##26	NOP58 (ENSCJAG00000004985)	BMPR2 (ENSCJAG00000005066)	FAM117B (ENSCJAG00000047724)	ICA1L (ENSCJAG00000005162)	WDR12 (ENSCJAG00000005171)	CARF (ENSCJAG00000005224)	NBEAL1 (ENSCJAG00000031696)	ENSCJAG00000081284	CYP20A1 (ENSCJAG00000039360)	ABI2 (ENSCJAG00000005399)	RAPH1 (ENSCJAG00000005339)	CD28 (ENSCJAG00000042321)	CTLA4 (ENSCJAG00000005495)
Mas night monkey	MODERN SPECIES	357	ENSANAG00000022594	CFLAR (ENSANAG00000024537)	CASP10 (ENSANAG00000018072)	CASP8 (ENSANAG00000028822)	ENSANAG00000021926	FLACC1 (ENSANAG00000028497)	ENSANAG00000020470	ENSANAG00000020277	TRAK2 (ENSANAG00000026933)	STRADB (ENSANAG00000027419)	ENSANAG00000024913	TMEM237 (ENSANAG00000019897) #18	MPP4 (ENSANAG00000033861) #19	ALS2 (ENSANAG00000037290) #20	CDK15 (ENSANAG00000037266) #21	FZD7 (ENSANAG00000017245) #22	KIAA2012 (ENSANAG00000029179) #23	ENSANAG00000033069 ##26	NOP58 (ENSANAG00000037044)	ENSANAG00000037788	BMPR2 (ENSANAG00000029511)	ENSANAG00000029164	FAM117B (ENSANAG00000032237)	ICA1L (ENSANAG00000036249)	WDR12 (ENSANAG00000030065)	CARF (ENSANAG00000032508)	NBEAL1 (ENSANAG00000029269)	ENSANAG00000023562 ##24	CYP20A1 (ENSANAG00000026608)	ABI2 (ENSANAG00000037183)	RAPH1 (ENSANAG00000037926)
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314 #25	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.j	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.a.d #26	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Hominidae	ANCESTRAL SPECIES	17	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.a.d #26	ENSGT00940000154319.u.b.a.a ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00390000011295.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.a.d #26	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939
Pan	ANCESTRAL SPECIES	12	ENSGT00390000011295.a	ENSGT00950000183123.g.b.b.i.a.a.b	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b.a.a ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00610000087446	ENSGT00390000015889.j	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Chimpanzee	MODERN SPECIES	15	HYCC2 (ENSPTRG00000012796)	ENSPTRG00000032634	NDUFB3 (ENSPTRG00000012797)	CFLAR (ENSPTRG00000012798)	CASP10 (ENSPTRG00000012800)	CASP8 (ENSPTRG00000012801)	FLACC1 (ENSPTRG00000012803)	TRAK2 (ENSPTRG00000012804)	ENSPTRG00000051730	STRADB (ENSPTRG00000050289)	C2CD6 (ENSPTRG00000012807)	TMEM237 (ENSPTRG00000012808) #18	MPP4 (ENSPTRG00000012809) #19	ALS2 (ENSPTRG00000012811) #20	CDK15 (ENSPTRG00000012812) #21	FZD7 (ENSPTRG00000049803) #22	KIAA2012 (ENSPTRG00000012814) #23	ENSPTRG00000050371	ENSPTRG00000049039 #24	ENSPTRG00000012817 ##26	NOP58 (ENSPTRG00000012818)	ENSPTRG00000047517	BMPR2 (ENSPTRG00000029076)	FAM117B (ENSPTRG00000012821)	ENSPTRG00000040928	ENSPTRG00000044806	ICA1L (ENSPTRG00000012822)	WDR12 (ENSPTRG00000012823)	CARF (ENSPTRG00000012824)	NBEAL1 (ENSPTRG00000012828)	ENSPTRG00000012829
Bonobo	MODERN SPECIES	15	ORC2 (ENSPPAG00000030211)	HYCC2 (ENSPPAG00000040686)	NDUFB3 (ENSPPAG00000040881)	CFLAR (ENSPPAG00000027058)	CASP10 (ENSPPAG00000042370)	CASP8 (ENSPPAG00000030711)	FLACC1 (ENSPPAG00000012440)	TRAK2 (ENSPPAG00000035936)	ENSPPAG00000032863	STRADB (ENSPPAG00000030005)	ENSPPAG00000042646	TMEM237 (ENSPPAG00000030371) #18	MPP4 (ENSPPAG00000035730) #19	ALS2 (ENSPPAG00000039038) #20	CDK15 (ENSPPAG00000027737) #21	FZD7 (ENSPPAG00000030490) #22	KIAA2012 (ENSPPAG00000038457) #23	ENSPPAG00000036444	ENSPPAG00000039551 #24	ENSPPAG00000039520 ##26	NOP58 (ENSPPAG00000036626)	ENSPPAG00000043823	BMPR2 (ENSPPAG00000017269)	FAM117B (ENSPPAG00000041596)	ENSPPAG00000027947	ICA1L (ENSPPAG00000037623)	ENSPPAG00000033697	CARF (ENSPPAG00000042960)	NBEAL1 (ENSPPAG00000040934)	CYP20A1 (ENSPPAG00000040724)	ABI2 (ENSPPAG00000030582)
Human	MODERN SPECIES	11	NIF3L1 (ENSG00000196290)	ORC2 (ENSG00000115942)	HYCC2 (ENSG00000155744)	NDUFB3 (ENSG00000119013)	CFLAR (ENSG00000003402)	CASP10 (ENSG00000003400)	CASP8 (ENSG00000064012)	FLACC1 (ENSG00000155749)	TRAK2 (ENSG00000115993)	STRADB (ENSG00000082146)	C2CD6 (ENSG00000155754)	TMEM237 (ENSG00000155755) #18	MPP4 (ENSG00000082126) #19	ALS2 (ENSG00000003393) #20	CDK15 (ENSG00000138395) #21	FZD7 (ENSG00000155760) #22	KIAA2012 (ENSG00000182329) #23	SUMO1 (ENSG00000116030) #26	NOP58 (ENSG00000055044)	BMPR2 (ENSG00000204217)	ENSG00000289490	FAM117B (ENSG00000138439)	ICA1L (ENSG00000163596)	WDR12 (ENSG00000138442)	CARF (ENSG00000138380)	NBEAL1 (ENSG00000144426)	CYP20A1 (ENSG00000119004)	ABI2 (ENSG00000138443)	RAPH1 (ENSG00000173166)	CD28 (ENSG00000178562)	CTLA4 (ENSG00000163599)
Gorilla	MODERN SPECIES	15	ENSGGOG00000022797	NDUFB3 (ENSGGOG00000023537)	CFLAR (ENSGGOG00000010972)	ENSGGOG00000042670	CASP10 (ENSGGOG00000012288)	CASP8 (ENSGGOG00000000209)	FLACC1 (ENSGGOG00000000211)	TRAK2 (ENSGGOG00000003014)	ENSGGOG00000040945	STRADB (ENSGGOG00000012183)	C2CD6 (ENSGGOG00000012199)	TMEM237 (ENSGGOG00000004720) #18	MPP4 (ENSGGOG00000015025) #19	ALS2 (ENSGGOG00000015032) #20	CDK15 (ENSGGOG00000028577) #21	FZD7 (ENSGGOG00000040323) #22	KIAA2012 (ENSGGOG00000010791) #23	ENSGGOG00000025256	ENSGGOG00000027043	ENSGGOG00000007480 #24	ENSGGOG00000026439 ##26	ENSGGOG00000014545	ENSGGOG00000042085	BMPR2 (ENSGGOG00000010989)	ENSGGOG00000014813	ENSGGOG00000016194	ICA1L (ENSGGOG00000017038)	WDR12 (ENSGGOG00000026073)	ENSGGOG00000036442	NBEAL1 (ENSGGOG00000015453)	CYP20A1 (ENSGGOG00000007044)
Orangutan	MODERN SPECIES	15	ORC2 (ENSPPYG00000013064)	HYCC2 (ENSPPYG00000029836)	NDUFB3 (ENSPPYG00000013065)	CFLAR (ENSPPYG00000013068)	CASP10 (ENSPPYG00000013070)	CASP8 (ENSPPYG00000013071)	FLACC1 (ENSPPYG00000013072)	TRAK2 (ENSPPYG00000013073)	STRADB (ENSPPYG00000013074)	C2CD6 (ENSPPYG00000013075)	ENSPPYG00000037718	TMEM237 (ENSPPYG00000013076) #18	MPP4 (ENSPPYG00000013077) #19	ALS2 (ENSPPYG00000013078) #20	CDK15 (ENSPPYG00000013079) #21	FZD7 (ENSPPYG00000013080) #22	KIAA2012 (ENSPPYG00000013082) #23	SUMO1 (ENSPPYG00000013083) ##26	NOP58 (ENSPPYG00000013084)	BMPR2 (ENSPPYG00000013085)	FAM117B (ENSPPYG00000037197)	ENSPPYG00000034941	ICA1L (ENSPPYG00000013088)	WDR12 (ENSPPYG00000040830)	CARF (ENSPPYG00000013090)	NBEAL1 (ENSPPYG00000013092)	CYP20A1 (ENSPPYG00000013093)	ABI2 (ENSPPYG00000013094)	RAPH1 (ENSPPYG00000013096)	CD28 (ENSPPYG00000039922)	CTLA4 (ENSPPYG00000036623)
Gibbon	MODERN SPECIES	14	NDUFB3 (ENSNLEG00000006946)	CFLAR (ENSNLEG00000006947)	ENSNLEG00000030686	CASP10 (ENSNLEG00000006951)	CASP8 (ENSNLEG00000032856)	FLACC1 (ENSNLEG00000006956)	TRAK2 (ENSNLEG00000006960)	ENSNLEG00000033546	STRADB (ENSNLEG00000006967)	ENSNLEG00000034127	ENSNLEG00000006972	TMEM237 (ENSNLEG00000006974) #18	MPP4 (ENSNLEG00000006977) #19	ALS2 (ENSNLEG00000006980) #20	CDK15 (ENSNLEG00000006990) #21	FZD7 (ENSNLEG00000035997) #22	KIAA2012 (ENSNLEG00000006992) #23	SUMO1 (ENSNLEG00000006997) #26	NOP58 (ENSNLEG00000007000)	ENSNLEG00000031345	BMPR2 (ENSNLEG00000007004)	ENSNLEG00000007009	ENSNLEG00000029928	ENSNLEG00000027717	ICA1L (ENSNLEG00000007012)	WDR12 (ENSNLEG00000007018)	CARF (ENSNLEG00000007026)	NBEAL1 (ENSNLEG00000007032)	ENSNLEG00000029450	CYP20A1 (ENSNLEG00000035097)	ENSNLEG00000007043
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00880000138031.i	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314 #25	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00390000008128.c.a.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314 #25	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00910000146883.C	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314 #25	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Macaca	ANCESTRAL SPECIES	15	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00910000146883.C	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00390000000685.o.a #24	ENSGT00860000133854 #23	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552.b	ENSGT00530000063873.A	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b
Pig-tailed macaque	MODERN SPECIES	409	ENSMNEG00000029934	ENSMNEG00000032011	CFLAR (ENSMNEG00000043615)	CASP10 (ENSMNEG00000036720)	ENSMNEG00000040361	CASP8 (ENSMNEG00000039649)	FLACC1 (ENSMNEG00000030040)	TRAK2 (ENSMNEG00000036459)	STRADB (ENSMNEG00000030956)	C2CD6 (ENSMNEG00000028303)	TMEM237 (ENSMNEG00000029387) #18	MPP4 (ENSMNEG00000033893) #19	ALS2 (ENSMNEG00000032184) #20	ENSMNEG00000036670	CDK15 (ENSMNEG00000043552) #21	FZD7 (ENSMNEG00000026832) #22	ENSMNEG00000029108 #24	KIAA2012 (ENSMNEG00000030605) #23	ENSMNEG00000041929 ##26	NOP58 (ENSMNEG00000012760)	BMPR2 (ENSMNEG00000032368)	FAM117B (ENSMNEG00000033073)	ICA1L (ENSMNEG00000039428)	ENSMNEG00000027411	CARF (ENSMNEG00000033105)	NBEAL1 (ENSMNEG00000044041)	CYP20A1 (ENSMNEG00000045164)	ABI2 (ENSMNEG00000028519)	RAPH1 (ENSMNEG00000030823)	ENSMNEG00000036304	CD28 (ENSMNEG00000033642)
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552.b	ENSGT00530000063873.A	ENSGT00530000063873.B
Rhesus	MODERN SPECIES	3	NIF3L1 (ENSMMUG00000006639)	ORC2 (ENSMMUG00000014460)	HYCC2 (ENSMMUG00000012224)	NDUFB3 (ENSMMUG00000060044)	CFLAR (ENSMMUG00000012310)	CASP10 (ENSMMUG00000031297)	CASP8 (ENSMMUG00000031296)	FLACC1 (ENSMMUG00000018356)	TRAK2 (ENSMMUG00000023812)	STRADB (ENSMMUG00000018141)	C2CD6 (ENSMMUG00000018144)	TMEM237 (ENSMMUG00000018147) #18	MPP4 (ENSMMUG00000018151) #19	ALS2 (ENSMMUG00000018155) #20	CDK15 (ENSMMUG00000014321) #21	FZD7 (ENSMMUG00000045285) #22	KIAA2012 (ENSMMUG00000001883) #23	SUMO1 (ENSMMUG00000005240) ##26	NOP58 (ENSMMUG00000000582)	ENSMMUG00000061021	BMPR2 (ENSMMUG00000009009)	FAM117B (ENSMMUG00000021152)	ICA1L (ENSMMUG00000017364)	ENSMMUG00000059397	WDR12 (ENSMMUG00000043068)	CARF (ENSMMUG00000006418)	NBEAL1 (ENSMMUG00000006420)	CYP20A1 (ENSMMUG00000005971)	ABI2 (ENSMMUG00000000312)	RAPH1 (ENSMMUG00000000314)	CD28 (ENSMMUG00000057214)
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00910000146883.C	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314 #25	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Olive baboon	MODERN SPECIES	1	ORC2 (ENSPANG00000034347)	HYCC2 (ENSPANG00000023886)	NDUFB3 (ENSPANG00000030814)	CFLAR (ENSPANG00000009268)	CASP10 (ENSPANG00000018306)	ENSPANG00000042566	CASP8 (ENSPANG00000012882)	FLACC1 (ENSPANG00000015084)	TRAK2 (ENSPANG00000006048)	STRADB (ENSPANG00000009089)	C2CD6 (ENSPANG00000004588)	TMEM237 (ENSPANG00000008517) #18	MPP4 (ENSPANG00000006047) #19	ALS2 (ENSPANG00000022091) #20	CDK15 (ENSPANG00000011570) #21	FZD7 (ENSPANG00000010400) #22	KIAA2012 (ENSPANG00000025945) #23	ENSPANG00000040608	ENSPANG00000031030 ##26	NOP58 (ENSPANG00000005211)	BMPR2 (ENSPANG00000006512)	ENSPANG00000042529	FAM117B (ENSPANG00000009087)	ICA1L (ENSPANG00000017467)	ENSPANG00000008983	ENSPANG00000008982	NBEAL1 (ENSPANG00000000692)	CYP20A1 (ENSPANG00000002439)	ABI2 (ENSPANG00000023238)	RAPH1 (ENSPANG00000018186)	CD28 (ENSPANG00000011488)
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00390000011295.a	ENSGT00390000010316.j.a	ENSGT00530000064199	ENSGT00940000154156.d.n.b.b.b	ENSGT00940000160994	ENSGT00910000146883.C	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.a	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314 #25	ENSGT00390000000685.o.a #24	ENSGT00940000154319.u.b.a.b ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b.m.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Sooty mangabey	MODERN SPECIES	570	NDUFB3 (ENSCATG00000035455)	CFLAR (ENSCATG00000031715)	ENSCATG00000030927	ENSCATG00000032008	CASP8 (ENSCATG00000036996)	ENSCATG00000033219	FLACC1 (ENSCATG00000031292)	TRAK2 (ENSCATG00000035925)	STRADB (ENSCATG00000031887)	C2CD6 (ENSCATG00000031983)	TMEM237 (ENSCATG00000032238) #18	MPP4 (ENSCATG00000035366) #19	ALS2 (ENSCATG00000033668) #20	CDK15 (ENSCATG00000033163) #21	ENSCATG00000032200	FZD7 (ENSCATG00000004913) #22	KIAA2012 (ENSCATG00000034304) #23	ENSCATG00000033452 #24	ENSCATG00000035585 ##26	NOP58 (ENSCATG00000037684)	BMPR2 (ENSCATG00000033192)	ENSCATG00000033526	FAM117B (ENSCATG00000033570)	ICA1L (ENSCATG00000036911)	ENSCATG00000035496	CARF (ENSCATG00000035061)	NBEAL1 (ENSCATG00000036478)	CYP20A1 (ENSCATG00000034415)	ABI2 (ENSCATG00000038300)	RAPH1 (ENSCATG00000044686)	ENSCATG00000043923
Drill	MODERN SPECIES	457	NDUFB3 (ENSMLEG00000022709)	ENSMLEG00000039976	CFLAR (ENSMLEG00000029692)	CASP10 (ENSMLEG00000035963)	ENSMLEG00000039409	CASP8 (ENSMLEG00000032037)	FLACC1 (ENSMLEG00000034476)	TRAK2 (ENSMLEG00000032765)	STRADB (ENSMLEG00000034988)	C2CD6 (ENSMLEG00000043681)	TMEM237 (ENSMLEG00000041782) #18	MPP4 (ENSMLEG00000013857) #19	ALS2 (ENSMLEG00000042400) #20	ENSMLEG00000040274	CDK15 (ENSMLEG00000035895) #21	FZD7 (ENSMLEG00000027282) #22	ENSMLEG00000030683 #24	KIAA2012 (ENSMLEG00000030041) #23	ENSMLEG00000034465 #25	NOP58 (ENSMLEG00000038485)	BMPR2 (ENSMLEG00000006140)	ENSMLEG00000033408	ENSMLEG00000024347	ICA1L (ENSMLEG00000039025)	ENSMLEG00000036849	CARF (ENSMLEG00000030166)
Vervet Monkey	MODERN SPECIES	1	ORC2 (ENSCSAG00000010834)	HYCC2 (ENSCSAG00000010815)	NDUFB3 (ENSCSAG00000010804)	CFLAR (ENSCSAG00000010798)	CASP10 (ENSCSAG00000010787)	CASP8 (ENSCSAG00000010781)	FLACC1 (ENSCSAG00000010769)	TRAK2 (ENSCSAG00000010758)	STRADB (ENSCSAG00000010744)	C2CD6 (ENSCSAG00000010715)	TMEM237 (ENSCSAG00000010640) #18	MPP4 (ENSCSAG00000010593) #19	ENSCSAG00000010567 #20	ENSCSAG00000010553 #20	CDK15 (ENSCSAG00000010541) #21	FZD7 (ENSCSAG00000018768) #22	ENSCSAG00000010526 #23	ENSCSAG00000010514 #23	ENSCSAG00000010504	NOP58 (ENSCSAG00000010496)	BMPR2 (ENSCSAG00000010485)	FAM117B (ENSCSAG00000010474)	ICA1L (ENSCSAG00000010466)	ENSCSAG00000010442	CARF (ENSCSAG00000010380)	NBEAL1 (ENSCSAG00000010364)	CYP20A1 (ENSCSAG00000010341)	ABI2 (ENSCSAG00000010327)	RAPH1 (ENSCSAG00000010318)	CD28 (ENSCSAG00000010308)	ENSCSAG00000010293
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Black snub-nosed monkey	MODERN SPECIES	765															ENSRBIG00000001928	FZD7 (ENSRBIG00000030688) #22	ENSRBIG00000006864	ENSRBIG00000039264 #24	KIAA2012 (ENSRBIG00000040519) #23	ENSRBIG00000000040	NOP58 (ENSRBIG00000043924)	ENSRBIG00000041839	BMPR2 (ENSRBIG00000029562)	FAM117B (ENSRBIG00000041167)	ICA1L (ENSRBIG00000004725)	ENSRBIG00000026475	CARF (ENSRBIG00000040577)	NBEAL1 (ENSRBIG00000037739)	CYP20A1 (ENSRBIG00000021309)	ABI2 (ENSRBIG00000029760)	RAPH1 (ENSRBIG00000043732)
Golden snub-nosed monkey	MODERN SPECIES	2603																FZD7 (ENSRROG00000036024) #22	ENSRROG00000030106	ENSRROG00000045576 #24	KIAA2012 (ENSRROG00000039835) #23	ENSRROG00000035462 ##26	NOP58 (ENSRROG00000038002)	ENSRROG00000036727	BMPR2 (ENSRROG00000029610)	FAM117B (ENSRROG00000003390)	ICA1L (ENSRROG00000029820)	ENSRROG00000045588
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Mouse lemur	MODERN SPECIES	30	HYCC2 (ENSMICG00000008160)	NDUFB3 (ENSMICG00000047803)	CFLAR (ENSMICG00000004452)	CASP10 (ENSMICG00000047692)	CASP8 (ENSMICG00000004468)	FLACC1 (ENSMICG00000004479)	ENSMICG00000033274	ENSMICG00000013250	STRADB (ENSMICG00000013292)	ENSMICG00000032723	C2CD6 (ENSMICG00000034413)	TMEM237 (ENSMICG00000013335) #18	MPP4 (ENSMICG00000013369) #19	ALS2 (ENSMICG00000013399) #20	CDK15 (ENSMICG00000008920) #21	FZD7 (ENSMICG00000037803) #22	KIAA2012 (ENSMICG00000008942) #23	SUMO1 (ENSMICG00000008968) ##26	ENSMICG00000003539	ENSMICG00000007114	BMPR2 (ENSMICG00000004432)	ENSMICG00000031997	FAM117B (ENSMICG00000042296)	SLC16A14 (ENSMICG00000010609)	FBXO36 (ENSMICG00000034045)	ICA1L (ENSMICG00000002701)	ENSMICG00000044580	CARF (ENSMICG00000011943)	ENSMICG00000026752	NBEAL1 (ENSMICG00000003736)	CYP20A1 (ENSMICG00000010806)
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00390000001413.b	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Coquerels sifaka	MODERN SPECIES	94	ORC2 (ENSPCOG00000021783)	HYCC2 (ENSPCOG00000014611)	NDUFB3 (ENSPCOG00000020529)	CFLAR (ENSPCOG00000011330)	CASP10 (ENSPCOG00000021615)	CASP8 (ENSPCOG00000024032)	FLACC1 (ENSPCOG00000023669)	TRAK2 (ENSPCOG00000023263)	STRADB (ENSPCOG00000017505)	ENSPCOG00000015949	ENSPCOG00000019752	TMEM237 (ENSPCOG00000006321) #18	MPP4 (ENSPCOG00000023532) #19	ALS2 (ENSPCOG00000026147) #20	CDK15 (ENSPCOG00000018541) #21	FZD7 (ENSPCOG00000013463) #22	KIAA2012 (ENSPCOG00000016002) #23	SUMO1 (ENSPCOG00000006748) ##26	ENSPCOG00000006096	ENSPCOG00000024395	ENSPCOG00000017531	BMPR2 (ENSPCOG00000019341)	ENSPCOG00000023341	ENSPCOG00000025609	FAM117B (ENSPCOG00000017335)	ICA1L (ENSPCOG00000027153)	WDR12 (ENSPCOG00000020334)	CARF (ENSPCOG00000016952)	NBEAL1 (ENSPCOG00000017923)	CYP20A1 (ENSPCOG00000025265)	ABI2 (ENSPCOG00000024066)
Greater bamboo lemur	MODERN SPECIES	1209	ORC2 (ENSPSMG00000018686)	HYCC2 (ENSPSMG00000018701)	NDUFB3 (ENSPSMG00000018710)	CFLAR (ENSPSMG00000018734)	CASP10 (ENSPSMG00000018750)	CASP8 (ENSPSMG00000018768)	FLACC1 (ENSPSMG00000018772)	TRAK2 (ENSPSMG00000018832)	STRADB (ENSPSMG00000018902)	ENSPSMG00000018917	ENSPSMG00000018918	TMEM237 (ENSPSMG00000018963) #18	MPP4 (ENSPSMG00000019065) #19	ALS2 (ENSPSMG00000019153) #20	CDK15 (ENSPSMG00000019177) #21	FZD7 (ENSPSMG00000019204) #22	KIAA2012 (ENSPSMG00000019210) #23	SUMO1 (ENSPSMG00000019226) ##26	NOP58 (ENSPSMG00000019269)	ENSPSMG00000019321
Bushbaby	MODERN SPECIES	128	ORC2 (ENSOGAG00000012329)	HYCC2 (ENSOGAG00000012336)	NDUFB3 (ENSOGAG00000013054)	CFLAR (ENSOGAG00000011604)	CASP10 (ENSOGAG00000010732)	CASP8 (ENSOGAG00000010735)	FLACC1 (ENSOGAG00000010736)	TRAK2 (ENSOGAG00000010739)	STRADB (ENSOGAG00000010744)	ENSOGAG00000028424	TMEM237 (ENSOGAG00000010754) #18	MPP4 (ENSOGAG00000010759) #19	ALS2 (ENSOGAG00000010767) #20	CDK15 (ENSOGAG00000010775) #21	ENSOGAG00000032427	FZD7 (ENSOGAG00000032455) #22	ENSOGAG00000007416 #23	ENSOGAG00000008508 #23	ENSOGAG00000030345 ##26	NOP58 (ENSOGAG00000003906)	BMPR2 (ENSOGAG00000007765)	FAM117B (ENSOGAG00000001497)	ICA1L (ENSOGAG00000001500)	WDR12 (ENSOGAG00000006573)	CARF (ENSOGAG00000032187)	NBEAL1 (ENSOGAG00000015089)	CYP20A1 (ENSOGAG00000015164)	ENSOGAG00000033059	ABI2 (ENSOGAG00000011602)	RAPH1 (ENSOGAG00000015099)	CD28 (ENSOGAG00000012567)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Glires	ANCESTRAL SPECIES	14	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041.ob	ENSGT00940000155041.nb	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Rabbit	MODERN SPECIES	18	CFLAR (ENSOCUG00000011072)	CASP10 (ENSOCUG00000004510)	ENSOCUG00000002567	ENSOCUG00000024651	ENSOCUG00000036865	ENSOCUG00000007128	FLACC1 (ENSOCUG00000007135)	TRAK2 (ENSOCUG00000000156)	STRADB (ENSOCUG00000022279)	ENSOCUG00000027085	ENSOCUG00000035542	TMEM237 (ENSOCUG00000012462) #18	MPP4 (ENSOCUG00000012470) #19	ALS2 (ENSOCUG00000012488) #20	CDK15 (ENSOCUG00000007737) #21	FZD7 (ENSOCUG00000011457) #22	ENSOCUG00000016611	KIAA2012 (ENSOCUG00000003626) #23	ENSOCUG00000037823 ##26	NOP58 (ENSOCUG00000003631)	BMPR2 (ENSOCUG00000001971)	ENSOCUG00000006347	ENSOCUG00000030693	ENSOCUG00000010497	WDR12 (ENSOCUG00000002961)	CARF (ENSOCUG00000005335)	ENSOCUG00000027134	NBEAL1 (ENSOCUG00000008716)	CYP20A1 (ENSOCUG00000008054)	ENSOCUG00000008062	ENSOCUG00000016722
Rodentia	ANCESTRAL SPECIES	14	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390.d	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Golden Hamster	MODERN SPECIES	640	Orc2 (ENSMAUG00000019370)	Hycc2 (ENSMAUG00000020858)	Ndufb3 (ENSMAUG00000017559)	ENSMAUG00000019942	ENSMAUG00000017788	ENSMAUG00000008355	Casp8 (ENSMAUG00000018476)	Flacc1 (ENSMAUG00000018077)	Trak2 (ENSMAUG00000001208)	ENSMAUG00000003249	ENSMAUG00000021781	Tmem237 (ENSMAUG00000022020) #18	Mpp4 (ENSMAUG00000006352) #19	Als2 (ENSMAUG00000013493) #20	Cdk15 (ENSMAUG00000017599) #21	Fzd7 (ENSMAUG00000010411) #22	ENSMAUG00000001003 #23	Sumo1 (ENSMAUG00000011639) ##26	Nop58 (ENSMAUG00000009734)	Bmpr2 (ENSMAUG00000009115)	Fam117b (ENSMAUG00000017770)	Ica1l (ENSMAUG00000013926)	Wdr12 (ENSMAUG00000001279)	Carf (ENSMAUG00000009693)	ENSMAUG00000007926	ENSMAUG00000001805	ENSMAUG00000007020	Abi2 (ENSMAUG00000016724)	ENSMAUG00000008616	Cd28 (ENSMAUG00000020132)	Ctla4 (ENSMAUG00000017208)
Chinese hamster chok1gshd	MODERN SPECIES	1	Ppil3 (ENSCGRG00001021470)	ENSCGRG00001018137	Orc2 (ENSCGRG00001016911)	Hycc2 (ENSCGRG00001015587)	Ndufb3 (ENSCGRG00001023485)	Cflar (ENSCGRG00001016122)	Casp8 (ENSCGRG00001020998)	Flacc1 (ENSCGRG00001018682)	Trak2 (ENSCGRG00001017078)	Stradb (ENSCGRG00001016031)	ENSCGRG00001018260	Tmem237 (ENSCGRG00001016616) #18	Mpp4 (ENSCGRG00001017399) #19	Als2 (ENSCGRG00001020892) #20	Cdk15 (ENSCGRG00001018439) #21	Fzd7 (ENSCGRG00001010812) #22	Gm973 (ENSCGRG00001017041) #23	ENSCGRG00001017267 ##26	Nop58 (ENSCGRG00001017869)	ENSCGRG00001009737	Bmpr2 (ENSCGRG00001020694)	Fam117b (ENSCGRG00001020456)	Ica1l (ENSCGRG00001018928)	WDR12 (ENSCGRG00001016494)	Carf (ENSCGRG00001016848)	Nbeal1 (ENSCGRG00001018313)	Cyp20a1 (ENSCGRG00001018508)	Abi2 (ENSCGRG00001017572)	Raph1 (ENSCGRG00001019075)	Cd28 (ENSCGRG00001021553)	Ctla4 (ENSCGRG00001017244)
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Northern American deer mouse	MODERN SPECIES	4	Nif3l1 (ENSPEMG00000023040)	Orc2 (ENSPEMG00000010035)	Hycc2 (ENSPEMG00000014604)	Ndufb3 (ENSPEMG00000018280)	ENSPEMG00000031091	Cflar (ENSPEMG00000022446)	Casp8 (ENSPEMG00000021544)	Flacc1 (ENSPEMG00000023426)	Trak2 (ENSPEMG00000016894)	Stradb (ENSPEMG00000023067)	ENSPEMG00000022643	Tmem237 (ENSPEMG00000022850) #18	Mpp4 (ENSPEMG00000021808) #19	Als2 (ENSPEMG00000010475) #20	Cdk15 (ENSPEMG00000021418) #21	Fzd7 (ENSPEMG00000008425) #22	Gm973 (ENSPEMG00000022698) #23	Sumo1 (ENSPEMG00000016027) ##26	ENSPEMG00000021263	Bmpr2 (ENSPEMG00000022646)	Fam117b (ENSPEMG00000011700)	ENSPEMG00000024187	Ica1l (ENSPEMG00000021278)	Wdr12 (ENSPEMG00000022189)	Carf (ENSPEMG00000020983)	ENSPEMG00000028509	Nbeal1 (ENSPEMG00000029402)	Cyp20a1 (ENSPEMG00000023627)	Abi2 (ENSPEMG00000020443)	Raph1 (ENSPEMG00000022086)	Cd28 (ENSPEMG00000028537)
Prairie vole	MODERN SPECIES	91	ENSMOCG00000005608	ENSMOCG00000013096	Nif3l1 (ENSMOCG00000012327)	Orc2 (ENSMOCG00000016158)	Hycc2 (ENSMOCG00000012367)	ENSMOCG00000019249	Casp8 (ENSMOCG00000001017)	Flacc1 (ENSMOCG00000015479)	Trak2 (ENSMOCG00000020133)	Stradb (ENSMOCG00000018130)	ENSMOCG00000000428	Tmem237 (ENSMOCG00000000108) #18	Mpp4 (ENSMOCG00000009328) #19	ENSMOCG00000014925 #20	Cdk15 (ENSMOCG00000007901) #21	Fzd7 (ENSMOCG00000006556) #22	Gm973 (ENSMOCG00000001667) #23	ENSMOCG00000000233 #25	Nop58 (ENSMOCG00000007756)	Bmpr2 (ENSMOCG00000004709)	Fam117b (ENSMOCG00000007027)	Ica1l (ENSMOCG00000017484)	Wdr12 (ENSMOCG00000020905)	Carf (ENSMOCG00000002732)
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.k	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Mus	ANCESTRAL SPECIES	5	ENSGT00940000159722	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.k	ENSGT00530000064199	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000159722	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.k	ENSGT00530000064199	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000159722	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.k	ENSGT00530000064199	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089.l	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159722	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.k	ENSGT00530000064199	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089.l	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Steppe mouse	MODERN SPECIES	44									Trak2 (ENSMSIG00000008206)	Stradb (ENSMSIG00000008262)	C2cd6 (ENSMSIG00000008310)	Tmem237 (ENSMSIG00000008413) #18	Mpp4 (ENSMSIG00000008670) #19	Als2 (ENSMSIG00000009450) #20	Cdk15 (ENSMSIG00000009531) #21	Fzd7 (ENSMSIG00000009593) #22	Gm973 (ENSMSIG00000009601) #23	ENSMSIG00000009835 ##26	Nop58 (ENSMSIG00000009865)	Bmpr2 (ENSMSIG00000009989)	Fam117b (ENSMSIG00000010018)	Ica1l (ENSMSIG00000010027)	Wdr12 (ENSMSIG00000010103)	Carf (ENSMSIG00000010210)	ENSMSIG00000010287	Nbeal1 (ENSMSIG00000010304)	Cyp20a1 (ENSMSIG00000010618)	ENSMSIG00000010702	Raph1 (ENSMSIG00000010756)	Cd28 (ENSMSIG00000011356)	ENSMSIG00000011370
spretus	MODERN SPECIES		Clk1 (MGP_SPRETEiJ_G0014969)	Ppil3 (MGP_SPRETEiJ_G0014970)	Nif3l1 (MGP_SPRETEiJ_G0014971)	Orc2 (MGP_SPRETEiJ_G0014972)	Hycc2 (MGP_SPRETEiJ_G0014973)	Ndufb3 (MGP_SPRETEiJ_G0014974)	Cflar (MGP_SPRETEiJ_G0014975)	Casp8 (MGP_SPRETEiJ_G0014976)	Trak2 (MGP_SPRETEiJ_G0014978)	Stradb (MGP_SPRETEiJ_G0014979)	MGP_SPRETEiJ_G0014980	Tmem237 (MGP_SPRETEiJ_G0014981) #18	Mpp4 (MGP_SPRETEiJ_G0014982) #19	Als2 (MGP_SPRETEiJ_G0014983) #20	Cdk15 (MGP_SPRETEiJ_G0014984) #21	Fzd7 (MGP_SPRETEiJ_G0014985) #22	Gm973 (MGP_SPRETEiJ_G0014986) #23	Sumo1 (MGP_SPRETEiJ_G0014987) ##26	Nop58 (MGP_SPRETEiJ_G0014988)	Bmpr2 (MGP_SPRETEiJ_G0014989)	MGP_SPRETEiJ_G0014990	Ica1l (MGP_SPRETEiJ_G0014991)	Wdr12 (MGP_SPRETEiJ_G0014992)	Carf (MGP_SPRETEiJ_G0014993)	Nbeal1 (MGP_SPRETEiJ_G0014994)	Cyp20a1 (MGP_SPRETEiJ_G0014995)	Abi2 (MGP_SPRETEiJ_G0014996)	Raph1 (MGP_SPRETEiJ_G0014997)	Cd28 (MGP_SPRETEiJ_G0014998)	Ctla4 (MGP_SPRETEiJ_G0014999)	Icos (MGP_SPRETEiJ_G0015000)
Mouse	MODERN SPECIES		Ppil3 (ENSMUSG00000026035)	Nif3l1 (ENSMUSG00000026036)	Orc2 (ENSMUSG00000026037)	Hycc2 (ENSMUSG00000038174)	Ndufb3 (ENSMUSG00000026032)	Flacc1 (ENSMUSG00000047528)	Cflar (ENSMUSG00000026031)	Casp8 (ENSMUSG00000026029)	Trak2 (ENSMUSG00000026028)	Stradb (ENSMUSG00000026027)	C2cd6 (ENSMUSG00000072295)	Tmem237 (ENSMUSG00000038079) #18	Mpp4 (ENSMUSG00000079550) #19	Als2 (ENSMUSG00000026024) #20	Cdk15 (ENSMUSG00000026023) #21	Fzd7 (ENSMUSG00000041075) #22	Gm973 (ENSMUSG00000047361) #23	Sumo1 (ENSMUSG00000026021) ##26	Nop58 (ENSMUSG00000026020)	Bmpr2 (ENSMUSG00000067336)	Fam117b (ENSMUSG00000041040)	Ica1l (ENSMUSG00000026018)	Wdr12 (ENSMUSG00000026019)	Carf (ENSMUSG00000026017)	Nbeal1 (ENSMUSG00000073664)	Cyp20a1 (ENSMUSG00000049439)	Abi2 (ENSMUSG00000026782)	Raph1 (ENSMUSG00000026014)	Cd28 (ENSMUSG00000026012)	Ctla4 (ENSMUSG00000026011)	Icos (ENSMUSG00000026009)
Ryukyu mouse	MODERN SPECIES		Clk1 (MGP_CAROLIEiJ_G0014163)	Ppil3 (MGP_CAROLIEiJ_G0014164)	Nif3l1 (MGP_CAROLIEiJ_G0014165)	Orc2 (MGP_CAROLIEiJ_G0014166)	Hycc2 (MGP_CAROLIEiJ_G0014167)	Ndufb3 (MGP_CAROLIEiJ_G0014168)	Cflar (MGP_CAROLIEiJ_G0014169)	Casp8 (MGP_CAROLIEiJ_G0014170)	Trak2 (MGP_CAROLIEiJ_G0014171)	Stradb (MGP_CAROLIEiJ_G0014172)	MGP_CAROLIEiJ_G0014173	Tmem237 (MGP_CAROLIEiJ_G0014174) #18	Mpp4 (MGP_CAROLIEiJ_G0014175) #19	Als2 (MGP_CAROLIEiJ_G0014176) #20	Cdk15 (MGP_CAROLIEiJ_G0014177) #21	Fzd7 (MGP_CAROLIEiJ_G0014178) #22	Gm973 (MGP_CAROLIEiJ_G0014179) #23	Sumo1 (MGP_CAROLIEiJ_G0014180) ##26	Nop58 (MGP_CAROLIEiJ_G0014181)	Bmpr2 (MGP_CAROLIEiJ_G0014182)	Fam117b (MGP_CAROLIEiJ_G0014183)	MGP_CAROLIEiJ_G0014184	MGP_CAROLIEiJ_G0014185	Carf (MGP_CAROLIEiJ_G0014186)	Nbeal1 (MGP_CAROLIEiJ_G0014187)	Cyp20a1 (MGP_CAROLIEiJ_G0014188)	Abi2 (MGP_CAROLIEiJ_G0014189)	Raph1 (MGP_CAROLIEiJ_G0014190)	Cd28 (MGP_CAROLIEiJ_G0014191)	Ctla4 (MGP_CAROLIEiJ_G0014192)	Icos (MGP_CAROLIEiJ_G0014193)
Shrew mouse	MODERN SPECIES	18	Clk1 (MGP_PahariEiJ_G0027401)	Ppil3 (MGP_PahariEiJ_G0027402)	Nif3l1 (MGP_PahariEiJ_G0027403)	Orc2 (MGP_PahariEiJ_G0027404)	Hycc2 (MGP_PahariEiJ_G0027405)	Ndufb3 (MGP_PahariEiJ_G0027406)	Cflar (MGP_PahariEiJ_G0027407)	Casp8 (MGP_PahariEiJ_G0027408)	Trak2 (MGP_PahariEiJ_G0027409)	Stradb (MGP_PahariEiJ_G0027410)	MGP_PahariEiJ_G0027411	Tmem237 (MGP_PahariEiJ_G0027412) #18	Mpp4 (MGP_PahariEiJ_G0027413) #19	Als2 (MGP_PahariEiJ_G0027414) #20	Cdk15 (MGP_PahariEiJ_G0027415) #21	Fzd7 (MGP_PahariEiJ_G0027416) #22	Gm973 (MGP_PahariEiJ_G0027417) #23	MGP_PahariEiJ_G0027418 ##26	Nop58 (MGP_PahariEiJ_G0027419)	Bmpr2 (MGP_PahariEiJ_G0027420)	Fam117b (MGP_PahariEiJ_G0027421)	MGP_PahariEiJ_G0027422	MGP_PahariEiJ_G0027423	Carf (MGP_PahariEiJ_G0027424)	MGP_PahariEiJ_G0027425	Cyp20a1 (MGP_PahariEiJ_G0027426)	Abi2 (MGP_PahariEiJ_G0027427)	Raph1 (MGP_PahariEiJ_G0027428)	Cd28 (MGP_PahariEiJ_G0027429)	Ctla4 (MGP_PahariEiJ_G0027430)	MGP_PahariEiJ_G0027431
Rat	MODERN SPECIES	19	Orc2 (ENSRNOG00000012558)	Hycc2 (ENSRNOG00000025079)	Ndufb3 (ENSRNOG00000011825)	Cflar (ENSRNOG00000012473)	Casp8 (ENSRNOG00000012331)	Flacc1 (ENSRNOG00000024917)	Trak2 (ENSRNOG00000010881)	Stradb (ENSRNOG00000010728)	C2cd6 (ENSRNOG00000012637)	Tmem237 (ENSRNOG00000024085) #18	Mpp4 (ENSRNOG00000010486) #19	LOC120094797 (ENSRNOG00000032860)	Als2 (ENSRNOG00000023280) #20	AABR07067814.1 (ENSRNOG00000032289)	Cdk15 (ENSRNOG00000022899) #21	Fzd7 (ENSRNOG00000016119) #22	RGD1562029 (ENSRNOG00000022723) #23	Sumo1 (ENSRNOG00000016133) ##26	Nop58 (ENSRNOG00000016486)	Bmpr2 (ENSRNOG00000022196)	ENSRNOG00000066953	LOC301444 (ENSRNOG00000019107)	Fam117b (ENSRNOG00000022066)	Ica1l (ENSRNOG00000017258)	Wdr12 (ENSRNOG00000017340)	Carf (ENSRNOG00000017491)	Nbeal1 (ENSRNOG00000021525)	Cyp20a1 (ENSRNOG00000017631)	Abi2 (ENSRNOG00000017707)	Raph1 (ENSRNOG00000014722)	Cd28 (ENSRNOG00000010283)
Upper Galilee mountains blind mole rat	MODERN SPECIES	921															Cdk15 (ENSNGAG00000014306) #21	Fzd7 (ENSNGAG00000012206) #22	ENSNGAG00000005188	Gm973 (ENSNGAG00000000576) #23	Sumo1 (ENSNGAG00000013533) ##26	Nop58 (ENSNGAG00000016443)	Bmpr2 (ENSNGAG00000002449)	Fam117b (ENSNGAG00000017990)	Ica1l (ENSNGAG00000001468)	Wdr12 (ENSNGAG00000021229)	Carf (ENSNGAG00000022294)
Lesser Egyptian jerboa	MODERN SPECIES	52	Clk1 (ENSJJAG00000024354)	ENSJJAG00000013473	Nif3l1 (ENSJJAG00000012006)	Orc2 (ENSJJAG00000011615)	ENSJJAG00000010907	Hycc2 (ENSJJAG00000022468)	Cflar (ENSJJAG00000024196)	Casp8 (ENSJJAG00000014714)	Flacc1 (ENSJJAG00000000467)	Trak2 (ENSJJAG00000019852)	Stradb (ENSJJAG00000021748)	Tmem237 (ENSJJAG00000021833) #18	Mpp4 (ENSJJAG00000000487) #19	Als2 (ENSJJAG00000017902) #20	Cdk15 (ENSJJAG00000013533) #21	Fzd7 (ENSJJAG00000011395) #22	Gm973 (ENSJJAG00000024266) #23	ENSJJAG00000022745 ##26	Nop58 (ENSJJAG00000018213)	Bmpr2 (ENSJJAG00000015151)	Fam117b (ENSJJAG00000019496)	Ica1l (ENSJJAG00000022732)	ENSJJAG00000000724	Carf (ENSJJAG00000014072)	Nbeal1 (ENSJJAG00000023210)	Cyp20a1 (ENSJJAG00000007155)	Abi2 (ENSJJAG00000006918)	ENSJJAG00000023840	Cd28 (ENSJJAG00000001227)	Ctla4 (ENSJJAG00000013112)	Icos (ENSJJAG00000007794)
Kangaroo rat	MODERN SPECIES	320	Aox2 (ENSDORG00000026718)	Bzw1 (ENSDORG00000029865)	Clk1 (ENSDORG00000007388)	Ppil3 (ENSDORG00000007389)	Nif3l1 (ENSDORG00000007390)	Orc2 (ENSDORG00000007391)	Hycc2 (ENSDORG00000029531)	ENSDORG00000024018	ENSDORG00000025646	Trak2 (ENSDORG00000001835)	Stradb (ENSDORG00000001838)	Tmem237 (ENSDORG00000001840) #18	Mpp4 (ENSDORG00000001842) #19	Als2 (ENSDORG00000001846) #20	Cdk15 (ENSDORG00000015415) #21	Fzd7 (ENSDORG00000014396) #22	ENSDORG00000025164	Bmpr2 (ENSDORG00000009209)	ENSDORG00000015288	Ica1l (ENSDORG00000015292)	Wdr12 (ENSDORG00000015294)	Carf (ENSDORG00000006614)	Nbeal1 (ENSDORG00000015714)	Cyp20a1 (ENSDORG00000015715)	ENSDORG00000028647	Abi2 (ENSDORG00000028252)	ENSDORG00000007525	Cd28 (ENSDORG00000013428)	Ctla4 (ENSDORG00000008556)	Icos (ENSDORG00000010237)	ENSDORG00000029364
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Hystricomorpha	ANCESTRAL SPECIES	28															ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A.t.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Naked mole-rat female	MODERN SPECIES	17	SLC13A4 (ENSHGLG00000004963)	STMP1 (ENSHGLG00000046204)	NUP205 (ENSHGLG00000016088)	CNOT4 (ENSHGLG00000011533)	ENSHGLG00000006398	STRA8 (ENSHGLG00000005005)	WDR91 (ENSHGLG00000004516)	CYREN (ENSHGLG00000049991)	TMEM140 (ENSHGLG00000043264)	ENSHGLG00000012139	BPGM (ENSHGLG00000049257)	ENSHGLG00000010076	ENSHGLG00000008556	ENSHGLG00000005076	ENSHGLG00000009970 #21	FZD7 (ENSHGLG00000033977) #22	KIAA2012 (ENSHGLG00000016559) #23	SUMO1 (ENSHGLG00000016423) ##26	ENSHGLG00000011278	ENSHGLG00000037661	ENSHGLG00000034448	BMPR2 (ENSHGLG00000004325)	FAM117B (ENSHGLG00000010337)	ENSHGLG00000042809	ENSHGLG00000032915	ICA1L (ENSHGLG00000007772)	WDR12 (ENSHGLG00000004891)	ENSHGLG00000004722	ENSHGLG00000020889	CARF (ENSHGLG00000007326)	ENSHGLG00000037622
Hystricomorpha_a	ANCESTRAL SPECIES	67									ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935	ENSGT00940000158075	ENSGT00390000017123.b	ENSGT00940000159383	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A.t.a	ENSGT00940000156449	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801	ENSGT00950000183214.a.b.a.b
Guinea pig	MODERN SPECIES	13	TM4SF20 (ENSCPOG00000014240)	MFF (ENSCPOG00000011881)	ENSCPOG00000035132	COL4A4 (ENSCPOG00000000720)	RHBDD1 (ENSCPOG00000000717)	IRS1 (ENSCPOG00000005422)	NYAP2 (ENSCPOG00000030888)	DOCK10 (ENSCPOG00000005801)	ENSCPOG00000013547	POMK (ENSCPOG00000037497)	FNTA (ENSCPOG00000000249)	HOOK3 (ENSCPOG00000000248)	RNF170 (ENSCPOG00000001900)	THAP1 (ENSCPOG00000038299)	CDK15 (ENSCPOG00000003272) #21	FZD7 (ENSCPOG00000003276) #22	SUMO1 (ENSCPOG00000039864) ##26	NOP58 (ENSCPOG00000030510)	BMPR2 (ENSCPOG00000009586)	ICA1L (ENSCPOG00000009349)	WDR12 (ENSCPOG00000008824)	CARF (ENSCPOG00000008827)	NBEAL1 (ENSCPOG00000008009)	CYP20A1 (ENSCPOG00000009758)	ABI2 (ENSCPOG00000007562)	RAPH1 (ENSCPOG00000020239)	CD28 (ENSCPOG00000035938)	CTLA4 (ENSCPOG00000019534)	ICOS (ENSCPOG00000030931)	ENSCPOG00000030358	PARD3B (ENSCPOG00000004380)
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT00940000168645	ENSGT00390000002219	ENSGT00940000154589.b	ENSGT00940000159753	ENSGT00940000162895	ENSGT00940000162335	ENSGT00940000154949.b	ENSGT00940000155279.C	ENSGT00390000001491.a	ENSGT00390000004945	ENSGT00550000074935	ENSGT00940000158075	ENSGT00390000017123.b	ENSGT00940000159383	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A.t.a	ENSGT00940000156449	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801	ENSGT00950000183214.a.b.a.b
Long-tailed chinchilla	MODERN SPECIES	164	ALPK1 (ENSCLAG00000005257)	NEUROG2 (ENSCLAG00000006433)	ENSCLAG00000003383	LARP7 (ENSCLAG00000005894)	ANK2 (ENSCLAG00000011230)	ENSCLAG00000004196	ENSCLAG00000003872	ENSCLAG00000013776	HGSNAT (ENSCLAG00000011347)	POMK (ENSCLAG00000011102)	FNTA (ENSCLAG00000013021)	HOOK3 (ENSCLAG00000009006)	RNF170 (ENSCLAG00000004208)	THAP1 (ENSCLAG00000003969)	CDK15 (ENSCLAG00000003400) #21	FZD7 (ENSCLAG00000017729) #22	KIAA2012 (ENSCLAG00000004402) #23	SUMO1 (ENSCLAG00000005196) ##26	NOP58 (ENSCLAG00000003819)	BMPR2 (ENSCLAG00000006272)	ICA1L (ENSCLAG00000005015)	WDR12 (ENSCLAG00000004491)	CARF (ENSCLAG00000007915)	ENSCLAG00000007700	ENSCLAG00000006700	NBEAL1 (ENSCLAG00000005102)	CYP20A1 (ENSCLAG00000004163)	ENSCLAG00000006025	ENSCLAG00000004760	ABI2 (ENSCLAG00000004021)	ENSCLAG00000003175
Degu	MODERN SPECIES	57	ENSODEG00000010616	ENSODEG00000019796	ENSODEG00000009949	NEUROG2 (ENSODEG00000019918)	ENSODEG00000010327	ENSODEG00000019792	LARP7 (ENSODEG00000011121)	ENSODEG00000011100	ENSODEG00000009832	POMK (ENSODEG00000011123)	ENSODEG00000010592	HOOK3 (ENSODEG00000010474)	RNF170 (ENSODEG00000009838)	ENSODEG00000009593	CDK15 (ENSODEG00000009574) #21	FZD7 (ENSODEG00000010108) #22	ENSODEG00000012987 ##26	NOP58 (ENSODEG00000010151)	BMPR2 (ENSODEG00000011132)	ENSODEG00000010517	FAM117B (ENSODEG00000010132)	ENSODEG00000010913	ENSODEG00000010403	ENSODEG00000009897	ENSODEG00000011455	WDR12 (ENSODEG00000011602)	CARF (ENSODEG00000011312)	NBEAL1 (ENSODEG00000010440)	CYP20A1 (ENSODEG00000010253)	ENSODEG00000009779	ABI2 (ENSODEG00000009457)
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Marmotini	ANCESTRAL SPECIES	2	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00390000000560.m.a.b	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Marmotini_b	ANCESTRAL SPECIES	103	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00390000000560.m.a.b	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Arctic ground squirrel	MODERN SPECIES	317	NIF3L1 (ENSUPAG00010015151)	ORC2 (ENSUPAG00010015014)	HYCC2 (ENSUPAG00010014985)	NDUFB3 (ENSUPAG00010014966)	CFLAR (ENSUPAG00010014940)	CASP10 (ENSUPAG00010014765)	CASP8 (ENSUPAG00010014705)	FLACC1 (ENSUPAG00010014658)	TRAK2 (ENSUPAG00010014606)	STRADB (ENSUPAG00010014591)	ENSUPAG00010014524	TMEM237 (ENSUPAG00010014479) #18	MPP4 (ENSUPAG00010014266) #19	ALS2 (ENSUPAG00010014184) #20	CDK15 (ENSUPAG00010014153) #21	FZD7 (ENSUPAG00010014150) #22	KIAA2012 (ENSUPAG00010014115) #23	SUMO1 (ENSUPAG00010014098) ##26	NOP58 (ENSUPAG00010014015)	ENSUPAG00010014007	ENSUPAG00010014004	BMPR2 (ENSUPAG00010013984)	FAM117B (ENSUPAG00010013968)	ICA1L (ENSUPAG00010013914)	WDR12 (ENSUPAG00010013907)	CARF (ENSUPAG00010013873)	NBEAL1 (ENSUPAG00010013702)
Squirrel	MODERN SPECIES	326	ORC2 (ENSSTOG00000019442)	HYCC2 (ENSSTOG00000023641)	NDUFB3 (ENSSTOG00000009635)	CFLAR (ENSSTOG00000009642)	CASP10 (ENSSTOG00000002364)	ENSSTOG00000022094	CASP8 (ENSSTOG00000011342)	FLACC1 (ENSSTOG00000006296)	TRAK2 (ENSSTOG00000002930)	STRADB (ENSSTOG00000021132)	TMEM237 (ENSSTOG00000025175) #18	MPP4 (ENSSTOG00000025322) #19	ENSSTOG00000029531	ALS2 (ENSSTOG00000016119) #20	CDK15 (ENSSTOG00000016128) #21	FZD7 (ENSSTOG00000020705) #22	Sumo1 (ENSSTOG00000025405) ##26	NOP58 (ENSSTOG00000006155)	BMPR2 (ENSSTOG00000002359)	FAM117B (ENSSTOG00000013447)	ICA1L (ENSSTOG00000009931)	CARF (ENSSTOG00000001585)	WDR12 (ENSSTOG00000001578)	NBEAL1 (ENSSTOG00000021783)	CYP20A1 (ENSSTOG00000013781)
Eurasian red squirrel	MODERN SPECIES	12	CFLAR (ENSSVLG00005004210)	ENSSVLG00005004275	CASP10 (ENSSVLG00005004333)	ENSSVLG00005004452	ENSSVLG00005004469	CASP8 (ENSSVLG00005004545)	ENSSVLG00005004626	FLACC1 (ENSSVLG00005004644)	ENSSVLG00005004684	STRADB (ENSSVLG00005004739)	ENSSVLG00005004791	TMEM237 (ENSSVLG00005004927) #18	MPP4 (ENSSVLG00005005386) #19	ALS2 (ENSSVLG00005006352) #20	CDK15 (ENSSVLG00005006442) #21	FZD7 (ENSSVLG00005006721) #22	KIAA2012 (ENSSVLG00005000255) #23	ENSSVLG00005000315 ##26	ENSSVLG00005000362	BMPR2 (ENSSVLG00005000484)	ENSSVLG00005000534	ENSSVLG00005000554	ENSSVLG00005000579	WDR12 (ENSSVLG00005000598)	ENSSVLG00005000686	ENSSVLG00005000784	NBEAL1 (ENSSVLG00005000853)	CYP20A1 (ENSSVLG00005000970)	ABI2 (ENSSVLG00005001071)	CD28 (ENSSVLG00005001473)	CTLA4 (ENSSVLG00005001529)
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Suina	ANCESTRAL SPECIES	3	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.bb	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Pig	MODERN SPECIES	6	NIF3L1 (ENSSSCG00000039654)	ORC2 (ENSSSCG00000016098)	HYCC2 (ENSSSCG00000036339)	ENSSSCG00000016100	CFLAR (ENSSSCG00000016101)	CASP10 (ENSSSCG00000026940)	CASP8 (ENSSSCG00000028157)	FLACC1 (ENSSSCG00000016105)	TRAK2 (ENSSSCG00000016104)	STRADB (ENSSSCG00000031271)	ENSSSCG00000016107	TMEM237 (ENSSSCG00000035161) #18	MPP4 (ENSSSCG00000026184) #19	ALS2 (ENSSSCG00000016109) #20	CDK15 (ENSSSCG00000022296) #21	FZD7 (ENSSSCG00000016111) #22	KIAA2012 (ENSSSCG00000016110) #23	SUMO1 (ENSSSCG00000035842) ##26	NOP58 (ENSSSCG00000022225)	BMPR2 (ENSSSCG00000016113)	FAM117B (ENSSSCG00000016114)	ENSSSCG00000043400	ICA1L (ENSSSCG00000016115)	WDR12 (ENSSSCG00000016116)	CARF (ENSSSCG00000016117)	NBEAL1 (ENSSSCG00000016118)	CYP20A1 (ENSSSCG00000055761)	ABI2 (ENSSSCG00000034630)	ENSSSCG00000016119	CD28 (ENSSSCG00000028561)	CTLA4 (ENSSSCG00000016122)
Chacoan peccary	MODERN SPECIES	91	NIF3L1 (ENSCWAG00000010511)	ORC2 (ENSCWAG00000010595)	HYCC2 (ENSCWAG00000010663)	NDUFB3 (ENSCWAG00000010743)	CFLAR (ENSCWAG00000010775)	ENSCWAG00000010876	CASP8 (ENSCWAG00000010971)	FLACC1 (ENSCWAG00000011076)	TRAK2 (ENSCWAG00000011203)	STRADB (ENSCWAG00000011261)	ENSCWAG00000011342	TMEM237 (ENSCWAG00000011481) #18	MPP4 (ENSCWAG00000011738) #19	ALS2 (ENSCWAG00000016152) #20	CDK15 (ENSCWAG00000016217) #21	FZD7 (ENSCWAG00000016583) #22	KIAA2012 (ENSCWAG00000016603) #23	SUMO1 (ENSCWAG00000016775) ##26	NOP58 (ENSCWAG00000016884)	BMPR2 (ENSCWAG00000016944)	FAM117B (ENSCWAG00000017046)	ICA1L (ENSCWAG00000017108)	WDR12 (ENSCWAG00000017209)	CARF (ENSCWAG00000017264)	NBEAL1 (ENSCWAG00000017563)	CYP20A1 (ENSCWAG00000017608)	ABI2 (ENSCWAG00000017671)	RAPH1 (ENSCWAG00000018090)	CD28 (ENSCWAG00000020352)	CTLA4 (ENSCWAG00000020380)	ICOS (ENSCWAG00000020408)
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Cetacea	ANCESTRAL SPECIES	14	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00940000159152.d.d	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00940000159152.d.d	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00940000159152.d.d	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000159152.d.d	ENSGT00390000010316	ENSGT00940000153311.a.b.a.j.b	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00940000168691.b	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00390000011295.a	ENSGT00940000159152.d.d	ENSGT00390000010316	ENSGT00940000153311.a.b.a.j.b	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00940000168691.b	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00950000183010.a.b.a.a.b	ENSGT00530000063873.A	ENSGT00530000063873.B
Beluga whale	MODERN SPECIES	84	ENSDLEG00000017782	NDUFB3 (ENSDLEG00000017800)	ENSDLEG00000017810	CFLAR (ENSDLEG00000017824)	CASP10 (ENSDLEG00000017886)	CASP8 (ENSDLEG00000017912)	TRAK2 (ENSDLEG00000017933)	STRADB (ENSDLEG00000017967)	ENSDLEG00000017981	ENSDLEG00000017990	ENSDLEG00000017999	TMEM237 (ENSDLEG00000018013) #18	MPP4 (ENSDLEG00000018040) #19	ALS2 (ENSDLEG00000018091) #20	CDK15 (ENSDLEG00000018138) #21	FZD7 (ENSDLEG00000018188) #22	KIAA2012 (ENSDLEG00000018200) #23	ENSDLEG00000018236 #25	ENSDLEG00000018249	BMPR2 (ENSDLEG00000018287)	FAM117B (ENSDLEG00000018310)	ICA1L (ENSDLEG00000018321)	WDR12 (ENSDLEG00000018347)	CARF (ENSDLEG00000018361)	NBEAL1 (ENSDLEG00000018755)	ENSDLEG00000020428	ENSDLEG00000008100	RAPH1 (ENSDLEG00000008223)	ENSDLEG00000008980	ENSDLEG00000009004	CTLA4 (ENSDLEG00000009020)
Narwhal	MODERN SPECIES	302	ENSMMNG00015008710	HYCC2 (ENSMMNG00015008700)	NDUFB3 (ENSMMNG00015008687)	ENSMMNG00015008677	CFLAR (ENSMMNG00015008658)	CASP10 (ENSMMNG00015008635)	CASP8 (ENSMMNG00015008620)	TRAK2 (ENSMMNG00015008594)	STRADB (ENSMMNG00015008568)	ENSMMNG00015008548	ENSMMNG00015008486	TMEM237 (ENSMMNG00015008418) #18	MPP4 (ENSMMNG00015008109) #19	ALS2 (ENSMMNG00015007780) #20	CDK15 (ENSMMNG00015007704) #21	FZD7 (ENSMMNG00015007670) #22	KIAA2012 (ENSMMNG00015007625) #23	SUMO1 (ENSMMNG00015007566) ##26	NOP58 (ENSMMNG00015007487)	BMPR2 (ENSMMNG00015007390)	FAM117B (ENSMMNG00015007345)	ICA1L (ENSMMNG00015007312)	WDR12 (ENSMMNG00015007273)	CARF (ENSMMNG00015007132)	NBEAL1 (ENSMMNG00015007045)	CYP20A1 (ENSMMNG00015007001)	ABI2 (ENSMMNG00015006963)	RAPH1 (ENSMMNG00015006494)	ENSMMNG00015006290	CD28 (ENSMMNG00015006278)	CTLA4 (ENSMMNG00015006260)
Vaquita	MODERN SPECIES	18	ENSPSNG00000017913	NDUFB3 (ENSPSNG00000017874)	ENSPSNG00000017846	CFLAR (ENSPSNG00000017754)	CASP10 (ENSPSNG00000017668)	CASP8 (ENSPSNG00000017590)	ENSPSNG00000017496	TRAK2 (ENSPSNG00000017440)	STRADB (ENSPSNG00000017373)	ENSPSNG00000017326	ENSPSNG00000016850	TMEM237 (ENSPSNG00000016656) #18	MPP4 (ENSPSNG00000014630) #19	ALS2 (ENSPSNG00000014137) #20	CDK15 (ENSPSNG00000013400) #21	FZD7 (ENSPSNG00000013312) #22	KIAA2012 (ENSPSNG00000013027) #23	SUMO1 (ENSPSNG00000012848) ##26	NOP58 (ENSPSNG00000012735)	BMPR2 (ENSPSNG00000012669)	FAM117B (ENSPSNG00000012551)	ICA1L (ENSPSNG00000012492)	WDR12 (ENSPSNG00000012441)	CARF (ENSPSNG00000011886)	NBEAL1 (ENSPSNG00000011649)	CYP20A1 (ENSPSNG00000011532)	ABI2 (ENSPSNG00000011330)	RAPH1 (ENSPSNG00000009801)	ENSPSNG00000009309	CTLA4 (ENSPSNG00000009249)	ICOS (ENSPSNG00000009099)
Dolphin	MODERN SPECIES	5315																FZD7 (ENSTTRG00000000636) #22	ENSTTRG00000000639 #23	ENSTTRG00000000640 #23	SUMO1 (ENSTTRG00000000642) ##26
Sperm whale	MODERN SPECIES	11	ORC2 (ENSPCTG00005001802)	FAM126B (ENSPCTG00005001830)	ENSPCTG00005001851	NDUFB3 (ENSPCTG00005001863)	CFLAR (ENSPCTG00005001880)	CASP10 (ENSPCTG00005001909)	CASP8 (ENSPCTG00005001931)	TRAK2 (ENSPCTG00005001954)	ENSPCTG00005002007	ENSPCTG00005002017	ENSPCTG00005002043	TMEM237 (ENSPCTG00005002055) #18	MPP4 (ENSPCTG00005002274) #19	ALS2 (ENSPCTG00005003300) #20	CDK15 (ENSPCTG00005003352) #21	FZD7 (ENSPCTG00005003371) #22	KIAA2012 (ENSPCTG00005003389) #23	ENSPCTG00005003434 ##26	NOP58 (ENSPCTG00005003474)	BMPR2 (ENSPCTG00005003518)	FAM117B (ENSPCTG00005003547)	ICA1L (ENSPCTG00005003564)	WDR12 (ENSPCTG00005003584)	CARF (ENSPCTG00005003645)	NBEAL1 (ENSPCTG00005003780)	CYP20A1 (ENSPCTG00005003802)	ABI2 (ENSPCTG00005003833)	RAPH1 (ENSPCTG00005003938)	ENSPCTG00005005119	CTLA4 (ENSPCTG00005005168)	ICOS (ENSPCTG00005005246)
Blue whale	MODERN SPECIES	18	HYCC2 (ENSBMSG00010004046)	ENSBMSG00010004069	ENSBMSG00010004090	CFLAR (ENSBMSG00010004118)	CASP10 (ENSBMSG00010004156)	CASP8 (ENSBMSG00010004172)	FLACC1 (ENSBMSG00010004200)	ENSBMSG00010004235	TRAK2 (ENSBMSG00010004246)	STRADB (ENSBMSG00010004272)	ENSBMSG00010004401	TMEM237 (ENSBMSG00010004486) #18	MPP4 (ENSBMSG00010004821) #19	ALS2 (ENSBMSG00010005735) #20	CDK15 (ENSBMSG00010005855) #21	FZD7 (ENSBMSG00010005931) #22	KIAA2012 (ENSBMSG00010005958) #23	SUMO1 (ENSBMSG00010006010) ##26	NOP58 (ENSBMSG00010006045)	BMPR2 (ENSBMSG00010006114)	FAM117B (ENSBMSG00010006217)	ICA1L (ENSBMSG00010006262)	WDR12 (ENSBMSG00010006329)	CARF (ENSBMSG00010006417)	ENSBMSG00010006579	ENSBMSG00010006612	CYP20A1 (ENSBMSG00010006657)	ABI2 (ENSBMSG00010006723)	ENSBMSG00010000193	ENSBMSG00010000215	ENSBMSG00010000230
Pecora	ANCESTRAL SPECIES	16	ENSGT00390000003590	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316.w	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Percora_a	ANCESTRAL SPECIES	5	ENSGT00390000003590	ENSGT00390000015228	ENSGT00910000148331	ENSGT00390000011295.a	ENSGT00390000010316.w	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.w	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v.cb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.w	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v.cb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Goat	MODERN SPECIES	11	ORC2 (ENSCHIG00000021629)	HYCC2 (ENSCHIG00000016483)	NDUFB3 (ENSCHIG00000022914)	ENSCHIG00000017826	CFLAR (ENSCHIG00000016459)	ENSCHIG00000003629	CASP8 (ENSCHIG00000019146)	FLACC1 (ENSCHIG00000022026)	TRAK2 (ENSCHIG00000026628)	STRADB (ENSCHIG00000015673)	ENSCHIG00000024118	TMEM237 (ENSCHIG00000025303) #18	MPP4 (ENSCHIG00000018210) #19	ALS2 (ENSCHIG00000023750) #20	CDK15 (ENSCHIG00000009588) #21	FZD7 (ENSCHIG00000026310) #22	KIAA2012 (ENSCHIG00000014714) #23	ENSCHIG00000008668 ##26	NOP58 (ENSCHIG00000025013)	BMPR2 (ENSCHIG00000020243)	FAM117B (ENSCHIG00000014630)	ICA1L (ENSCHIG00000013077)	WDR12 (ENSCHIG00000009469)	CARF (ENSCHIG00000023655)	ENSCHIG00000016764	NBEAL1 (ENSCHIG00000000921)	CYP20A1 (ENSCHIG00000022946)	ABI2 (ENSCHIG00000002652)	RAPH1 (ENSCHIG00000025930)	CD28 (ENSCHIG00000024564)	CTLA4 (ENSCHIG00000008042)
Rambouillet Sheep	MODERN SPECIES	11	NIF3L1 (ENSOARG00020016593)	ORC2 (ENSOARG00020016740)	FAM126B (ENSOARG00020016858)	NDUFB3 (ENSOARG00020017061)	NDUFB3 (ENSOARG00020017109)	ENSOARG00020017157	CASP8 (ENSOARG00020017221)	FLACC1 (ENSOARG00020017518)	TRAK2 (ENSOARG00020017672)	STRADB (ENSOARG00020017965)	ENSOARG00020018022	TMEM237 (ENSOARG00020018644) #18	MPP4 (ENSOARG00020018870) #19	ALS2 (ENSOARG00020022676) #20	CDK15 (ENSOARG00020022852) #21	FZD7 (ENSOARG00020023182) #22	KIAA2012 (ENSOARG00020023194) #23	SUMO1 (ENSOARG00020023283) ##26	NOP58 (ENSOARG00020023408)	BMPR2 (ENSOARG00020006563)	FAM117B (ENSOARG00020006688)	ICA1L (ENSOARG00020006778)	WDR12 (ENSOARG00020006896)	CARF (ENSOARG00020006968)	NBEAL1 (ENSOARG00020007440)	CYP20A1 (ENSOARG00020007538)	ABI2 (ENSOARG00020007596)	RAPH1 (ENSOARG00020007863)	ENSOARG00020008167	CD28 (ENSOARG00020008197)	CTLA4 (ENSOARG00020008302)
Bovinae	ANCESTRAL SPECIES	5	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.w.c	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000157458.c	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v.cb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Bos	ANCESTRAL SPECIES	6	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.w.c	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000157458.c	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v.cb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Bos_b	ANCESTRAL SPECIES	3	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.w.c	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000157458.c	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v.cb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Hybrid Bos Indicus	MODERN SPECIES	11	NIF3L1 (ENSBIXG00005031554)	ORC2 (ENSBIXG00005031555)	HYCC2 (ENSBIXG00005031556)	ENSBIXG00005031558	CFLAR (ENSBIXG00005031559)	FLACC1 (ENSBIXG00005031561)	CASP8 (ENSBIXG00005031562)	ENSBIXG00005031563	TRAK2 (ENSBIXG00005031564)	STRADB (ENSBIXG00005031565)	ENSBIXG00005031566	TMEM237 (ENSBIXG00005031567) #18	MPP4 (ENSBIXG00005031568) #19	ALS2 (ENSBIXG00005031570) #20	CDK15 (ENSBIXG00005031571) #21	FZD7 (ENSBIXG00005031573) #22	KIAA2012 (ENSBIXG00005031574) #23	ENSBIXG00005031575 ##26	NOP58 (ENSBIXG00005031577)	BMPR2 (ENSBIXG00005031582)	FAM117B (ENSBIXG00005031583)	ICA1L (ENSBIXG00005031584)	WDR12 (ENSBIXG00005031585)	CARF (ENSBIXG00005031586)	ENSBIXG00005031587	NBEAL1 (ENSBIXG00005031588)	CYP20A1 (ENSBIXG00005031589)	ABI2 (ENSBIXG00005031590)	RAPH1 (ENSBIXG00005031591)	CD28 (ENSBIXG00005031593)	CTLA4 (ENSBIXG00005031594)
Cow	MODERN SPECIES	11	PPIL3 (ENSBTAG00000005416)	NIF3L1 (ENSBTAG00000018282)	ORC2 (ENSBTAG00000031473)	HYCC2 (ENSBTAG00000021201)	NDUFB3 (ENSBTAG00000012760)	CFLAR (ENSBTAG00000010998)	CASP8 (ENSBTAG00000015718)	FLACC1 (ENSBTAG00000012334)	TRAK2 (ENSBTAG00000014933)	STRADB (ENSBTAG00000019298)	C2CD6 (ENSBTAG00000017436)	TMEM237 (ENSBTAG00000017437) #18	MPP4 (ENSBTAG00000052816) #19	ALS2 (ENSBTAG00000007395) #20	CDK15 (ENSBTAG00000055073) #21	FZD7 (ENSBTAG00000002283) #22	KIAA2012 (ENSBTAG00000034192) #23	SUMO1 (ENSBTAG00000049402) ##26	NOP58 (ENSBTAG00000005517)	BMPR2 (ENSBTAG00000006420)	FAM117B (ENSBTAG00000048876)	ICA1L (ENSBTAG00000008673)	WDR12 (ENSBTAG00000015424)	ENSBTAG00000053168	CARF (ENSBTAG00000016000)	ENSBTAG00000019994	NBEAL1 (ENSBTAG00000014469)	CYP20A1 (ENSBTAG00000000851)	ABI2 (ENSBTAG00000011017)	RAPH1 (ENSBTAG00000027201)	CD28 (ENSBTAG00000007445)
Bos_a	ANCESTRAL SPECIES	4	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.w.c	ENSGT00530000064199	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000157458.c	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v.cb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Domestic yak	MODERN SPECIES	11	ENSBGRG00000022748	ENSBGRG00000022737	CFLAR (ENSBGRG00000022578)	ENSBGRG00000022548	ENSBGRG00000022534	CASP8 (ENSBGRG00000022436)	ENSBGRG00000022390	FLACC1 (ENSBGRG00000022275)	TRAK2 (ENSBGRG00000022201)	STRADB (ENSBGRG00000022109)	ENSBGRG00000021802	TMEM237 (ENSBGRG00000021384) #18	MPP4 (ENSBGRG00000018555) #19	ALS2 (ENSBGRG00000018345) #20	CDK15 (ENSBGRG00000018223) #21	FZD7 (ENSBGRG00000018191) #22	KIAA2012 (ENSBGRG00000018013) #23	ENSBGRG00000017875 ##26	NOP58 (ENSBGRG00000017588)	BMPR2 (ENSBGRG00000017354)	ENSBGRG00000017311	FAM117B (ENSBGRG00000017110)	ICA1L (ENSBGRG00000016892)	WDR12 (ENSBGRG00000016744)	ENSBGRG00000016729	CARF (ENSBGRG00000016286)	ENSBGRG00000016261	NBEAL1 (ENSBGRG00000016043)	CYP20A1 (ENSBGRG00000015562)	ABI2 (ENSBGRG00000014834)	ENSBGRG00000012733
Wild yak	MODERN SPECIES	1623						CASP8 (ENSBMUG00000016946)	FLACC1 (ENSBMUG00000016974)	ENSBMUG00000016979	TRAK2 (ENSBMUG00000016996)	STRADB (ENSBMUG00000017010)	ENSBMUG00000017038	TMEM237 (ENSBMUG00000017070) #18	MPP4 (ENSBMUG00000017529) #19	ALS2 (ENSBMUG00000017587) #20	CDK15 (ENSBMUG00000017707) #21	FZD7 (ENSBMUG00000017750) #22	KIAA2012 (ENSBMUG00000017856) #23	ENSBMUG00000017957	NOP58 (ENSBMUG00000017992)	BMPR2 (ENSBMUG00000018053)	ENSBMUG00000018077	ENSBMUG00000018084	ICA1L (ENSBMUG00000018119)	WDR12 (ENSBMUG00000018135)	CARF (ENSBMUG00000018245)	NBEAL1 (ENSBMUG00000018435)	CYP20A1 (ENSBMUG00000018465)	ABI2 (ENSBMUG00000018557)	ENSBMUG00000018823	CD28 (ENSBMUG00000018899)	CTLA4 (ENSBMUG00000018913)
Siberian musk deer	MODERN SPECIES	351	PPIL3 (ENSMMSG00000024329)	NIF3L1 (ENSMMSG00000024332)	ORC2 (ENSMMSG00000024335)	ENSMMSG00000024336	HYCC2 (ENSMMSG00000024338)	NDUFB3 (ENSMMSG00000010949)	CFLAR (ENSMMSG00000010965)	CASP8 (ENSMMSG00000011027)	FLACC1 (ENSMMSG00000011224)	TRAK2 (ENSMMSG00000011295)	STRADB (ENSMMSG00000011336)	TMEM237 (ENSMMSG00000011381) #18	MPP4 (ENSMMSG00000011618) #19	ALS2 (ENSMMSG00000014494) #20	CDK15 (ENSMMSG00000014595) #21	FZD7 (ENSMMSG00000014860) #22	KIAA2012 (ENSMMSG00000014878) #23	ENSMMSG00000014944 ##26	ENSMMSG00000015014	BMPR2 (ENSMMSG00000015064)	FAM117B (ENSMMSG00000015175)	ICA1L (ENSMMSG00000015216)	WDR12 (ENSMMSG00000015269)	CARF (ENSMMSG00000015323)	NBEAL1 (ENSMMSG00000015534)	CYP20A1 (ENSMMSG00000015574)	ABI2 (ENSMMSG00000015631)	RAPH1 (ENSMMSG00000015916)
Yarkand deer	MODERN SPECIES	31	PPIL3 (ENSCHYG00000004901)	NIF3L1 (ENSCHYG00000004879)	ORC2 (ENSCHYG00000004839)	HYCC2 (ENSCHYG00000004790)	ENSCHYG00000004767	CFLAR (ENSCHYG00000004722)	CASP8 (ENSCHYG00000004683)	FLACC1 (ENSCHYG00000004659)	TRAK2 (ENSCHYG00000004632)	STRADB (ENSCHYG00000004596)	C2CD6 (ENSCHYG00000004505)	TMEM237 (ENSCHYG00000004397) #18	MPP4 (ENSCHYG00000004046) #19	ALS2 (ENSCHYG00000003878) #20	CDK15 (ENSCHYG00000003776) #21	FZD7 (ENSCHYG00000003728) #22	KIAA2012 (ENSCHYG00000003689) #23	ENSCHYG00000003665	ENSCHYG00000003640 ##26	NOP58 (ENSCHYG00000003579)	BMPR2 (ENSCHYG00000003535)	FAM117B (ENSCHYG00000003510)	ICA1L (ENSCHYG00000003466)	WDR12 (ENSCHYG00000003428)	ENSCHYG00000003419	CARF (ENSCHYG00000003336)	NBEAL1 (ENSCHYG00000003290)	CYP20A1 (ENSCHYG00000003265)	ENSCHYG00000003256	ABI2 (ENSCHYG00000003231)	RAPH1 (ENSCHYG00000002595)
Camelidae	ANCESTRAL SPECIES	58	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Arabian camel	MODERN SPECIES	31	ORC2 (ENSCDRG00005007036)	HYCC2 (ENSCDRG00005006918)	ENSCDRG00005006864	CFLAR (ENSCDRG00005006763)	ENSCDRG00005006679	CASP10 (ENSCDRG00005006612)	CASP8 (ENSCDRG00005006441)	FLACC1 (ENSCDRG00005006384)	TRAK2 (ENSCDRG00005021447)	STRADB (ENSCDRG00005021435)	ENSCDRG00005021425	TMEM237 (ENSCDRG00005021415) #18	MPP4 (ENSCDRG00005019977) #19	ALS2 (ENSCDRG00005019833) #20	CDK15 (ENSCDRG00005019534) #21	FZD7 (ENSCDRG00005019516) #22	KIAA2012 (ENSCDRG00005019503) #23	SUMO1 (ENSCDRG00005019446) ##26	NOP58 (ENSCDRG00005019373)	ENSCDRG00005019360	BMPR2 (ENSCDRG00005019320)	ENSCDRG00005019289	ENSCDRG00005019283	ICA1L (ENSCDRG00005019255)	WDR12 (ENSCDRG00005019221)	CARF (ENSCDRG00005019098)	NBEAL1 (ENSCDRG00005019031)	ABI2 (ENSCDRG00005018744)	ENSCDRG00005018577	CD28 (ENSCDRG00005018484)	CTLA4 (ENSCDRG00005018448)
Alpaca	MODERN SPECIES	3021	NIF3L1 (ENSVPAG00000006683)	ORC2 (ENSVPAG00000006684)	HYCC2 (ENSVPAG00000006685)	NDUFB3 (ENSVPAG00000006686)	CFLAR (ENSVPAG00000006687)	CASP10 (ENSVPAG00000006689)	CASP8 (ENSVPAG00000006690)	ENSVPAG00000006691	TRAK2 (ENSVPAG00000006692)	ENSVPAG00000006693	ENSVPAG00000006694	TMEM237 (ENSVPAG00000006695) #18	ENSVPAG00000006696 #19	ALS2 (ENSVPAG00000006703) #20	CDK15 (ENSVPAG00000006704) #21	FZD7 (ENSVPAG00000006705) #22	ENSVPAG00000006706 #23	ENSVPAG00000006710 #23	SUMO1 (ENSVPAG00000006713) ##26	NOP58 (ENSVPAG00000006715)
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00940000153064.b.d
Carnivora	ANCESTRAL SPECIES	17	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00940000157820.a.a	ENSGT00530000063873.A	ENSGT01090000260046
Felidae	ANCESTRAL SPECIES	15	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00940000157820.a.a	ENSGT00530000063873.A	ENSGT00530000063873.B
Panthera	ANCESTRAL SPECIES	9	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00950000182891.a.a.a	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.c.b	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00950000182891.a.a.a	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.c.b	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
leopard	MODERN SPECIES	196												TMEM237 (ENSPPRG00000012249) #18	MPP4 (ENSPPRG00000012822) #19	ALS2 (ENSPPRG00000012887) #20	CDK15 (ENSPPRG00000013166) #21	FZD7 (ENSPPRG00000012355) #22	KIAA2012 (ENSPPRG00000013282) #23	ENSPPRG00000012375	SUMO1 (ENSPPRG00000013405) ##26	NOP58 (ENSPPRG00000013837)	BMPR2 (ENSPPRG00000013936)	FAM117B (ENSPPRG00000013956)	ICA1L (ENSPPRG00000014024)	WDR12 (ENSPPRG00000014037)	CARF (ENSPPRG00000014454)	ENSPPRG00000014526
lion	MODERN SPECIES	8	ORC2 (ENSPLOG00000015970)	HYCC2 (ENSPLOG00000015803)	NDUFB3 (ENSPLOG00000015772)	CFLAR (ENSPLOG00000015687)	CASP10 (ENSPLOG00000015629)	ENSPLOG00000015584	CASP8 (ENSPLOG00000015490)	FLACC1 (ENSPLOG00000015436)	TRAK2 (ENSPLOG00000015326)	STRADB (ENSPLOG00000015110)	ENSPLOG00000015067	TMEM237 (ENSPLOG00000014799) #18	MPP4 (ENSPLOG00000013660) #19	ALS2 (ENSPLOG00000012986) #20	CDK15 (ENSPLOG00000012480) #21	FZD7 (ENSPLOG00000012419) #22	KIAA2012 (ENSPLOG00000012218) #23	ENSPLOG00000012180	ENSPLOG00000012052 ##26	NOP58 (ENSPLOG00000011950)	BMPR2 (ENSPLOG00000011747)	FAM117B (ENSPLOG00000011690)	ICA1L (ENSPLOG00000011556)	WDR12 (ENSPLOG00000011514)	CARF (ENSPLOG00000011224)	NBEAL1 (ENSPLOG00000010825)	CYP20A1 (ENSPLOG00000010756)	ABI2 (ENSPLOG00000010377)	ENSPLOG00000010151	CD28 (ENSPLOG00000010049)	CTLA4 (ENSPLOG00000010005)
Cat	MODERN SPECIES	239	ORC2 (ENSFCAG00000030533)	HYCC2 (ENSFCAG00000018116)	NDUFB3 (ENSFCAG00000029710)	CFLAR (ENSFCAG00000004731)	CASP10 (ENSFCAG00000004733)	CASP8 (ENSFCAG00000025854)	FLACC1 (ENSFCAG00000004546)	TRAK2 (ENSFCAG00000006099)	STRADB (ENSFCAG00000029023)	ENSFCAG00000050162	C2CD6 (ENSFCAG00000009008)	TMEM237 (ENSFCAG00000004003) #18	MPP4 (ENSFCAG00000004006) #19	ALS2 (ENSFCAG00000004007) #20	CDK15 (ENSFCAG00000000530) #21	FZD7 (ENSFCAG00000012609) #22	KIAA2012 (ENSFCAG00000027667) #23	ENSFCAG00000031005 ##26	NOP58 (ENSFCAG00000014093)	BMPR2 (ENSFCAG00000014094)	FAM117B (ENSFCAG00000046269)	ICA1L (ENSFCAG00000008514)	WDR12 (ENSFCAG00000026676)	CARF (ENSFCAG00000046458)	NBEAL1 (ENSFCAG00000025997)	ENSFCAG00000027770	ENSFCAG00000048141	CYP20A1 (ENSFCAG00000022927)	ABI2 (ENSFCAG00000012982)	RAPH1 (ENSFCAG00000019050)	ENSFCAG00000034107
Caniformia	ANCESTRAL SPECIES	14	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00940000157820.a.a	ENSGT00530000063873.A	ENSGT01090000260046
Canidae	ANCESTRAL SPECIES	20	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.e	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT01090000260046.e.a.a.b
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.e	ENSGT00860000133854 #23	ENSGT00940000154319.v.kb ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000154694.l.b.b.a.a.b	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Dingo	DUPLICATION
Dingo	MODERN SPECIES	266																ENSCAFG00020016461 #22	ENSCAFG00020016460 #22
Dingo	MODERN SPECIES	266																ENSCAFG00020016460 #22	ENSCAFG00020016461 #22
Dog	MODERN SPECIES	30	HYCC2 (ENSCAFG00845029821)	NDUFB3 (ENSCAFG00845029848)	CFLAR (ENSCAFG00845029893)	CASP10 (ENSCAFG00845029977)	MYCBP (ENSCAFG00845029987)	CASP8 (ENSCAFG00845030024)	FLACC1 (ENSCAFG00845030068)	TRAK2 (ENSCAFG00845030112)	STRADB (ENSCAFG00845030183)	C2CD6 (ENSCAFG00845030271)	TMEM237 (ENSCAFG00845030434) #18	MPP4 (ENSCAFG00845030583) #19	ALS2 (ENSCAFG00845030698) #20	ENSCAFG00845030734	CDK15 (ENSCAFG00845030741) #21	FZD7 (ENSCAFG00845030754) #22	ENSCAFG00845015007	KIAA2012 (ENSCAFG00845015039) #23	SUMO1 (ENSCAFG00845015246) ##26	NOP58 (ENSCAFG00845015320)	BMPR2 (ENSCAFG00845015459)	FAM117B (ENSCAFG00845015582)	ICA1L (ENSCAFG00845015647)	WDR12 (ENSCAFG00845015685)	CARF (ENSCAFG00845015868)	ENSCAFG00845016161	NBEAL1 (ENSCAFG00845016248)	CYP20A1 (ENSCAFG00845016438)	ENSCAFG00845016541	ABI2 (ENSCAFG00845016661)	ENSCAFG00845016782
Red fox	MODERN SPECIES	41	NIF3L1 (ENSVVUG00000019010)	ORC2 (ENSVVUG00000018996)	FAM126B (ENSVVUG00000018981)	NDUFB3 (ENSVVUG00000018975)	CFLAR (ENSVVUG00000018963)	CASP10 (ENSVVUG00000018953)	CASP8 (ENSVVUG00000018943)	ALS2CR12 (ENSVVUG00000018915)	TRAK2 (ENSVVUG00000018884)	STRADB (ENSVVUG00000018875)	C2CD6 (ENSVVUG00000018827)	TMEM237 (ENSVVUG00000018780) #18	MPP4 (ENSVVUG00000018433) #19	ALS2 (ENSVVUG00000018378) #20	CDK15 (ENSVVUG00000018343) #21	FZD7 (ENSVVUG00000018326) #22	ENSVVUG00000018323	KIAA2012 (ENSVVUG00000018303) #23	ENSVVUG00000018290 #25	NOP58 (ENSVVUG00000018258)	BMPR2 (ENSVVUG00000018236)	ENSVVUG00000018233	ENSVVUG00000018231	ICA1L (ENSVVUG00000018171)	WDR12 (ENSVVUG00000018074)	CARF (ENSVVUG00000017926)	ENSVVUG00000017885	NBEAL1 (ENSVVUG00000017646)	CYP20A1 (ENSVVUG00000017336)	ENSVVUG00000017318	ENSVVUG00000017315
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00940000157820.a.a	ENSGT00530000063873.A	ENSGT00530000063873.B
Ursidae	ANCESTRAL SPECIES	7	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.o	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159.d #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314.b #25	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A	ENSGT00530000063873.B
Ursus	ANCESTRAL SPECIES	4	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.o	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159.d #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00950000183314.b #25	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00940000157820.a.a.k	ENSGT00530000063873.A	ENSGT00530000063873.B
American black bear	MODERN SPECIES	374														ALS2 (ENSUAMG00000025093) #20	CDK15 (ENSUAMG00000025095) #21	FZD7 (ENSUAMG00000025096) #22	KIAA2012 (ENSUAMG00000025097) #23	ENSUAMG00000025099	NOP58 (ENSUAMG00000025100)	ENSUAMG00000000067
Polar bear	MODERN SPECIES	142	PPIL3 (ENSUMAG00000021460)	ORC2 (ENSUMAG00000021479)	HYCC2 (ENSUMAG00000021559)	ENSUMAG00000021560	CFLAR (ENSUMAG00000021563)	CASP10 (ENSUMAG00000021566)	CASP8 (ENSUMAG00000021570)	FLACC1 (ENSUMAG00000021573)	TRAK2 (ENSUMAG00000021580)	STRADB (ENSUMAG00000021585)	ENSUMAG00000021587	TMEM237 (ENSUMAG00000021594) #18	MPP4 (ENSUMAG00000021611) #19	ALS2 (ENSUMAG00000021699) #20	CDK15 (ENSUMAG00000021838) #21	FZD7 (ENSUMAG00000021852) #22	KIAA2012 (ENSUMAG00000021861) #23	ENSUMAG00000021873 #25	NOP58 (ENSUMAG00000021875)	BMPR2 (ENSUMAG00000021888)	ENSUMAG00000021893	ENSUMAG00000021898	ICA1L (ENSUMAG00000021899)	WDR12 (ENSUMAG00000021904)	CARF (ENSUMAG00000021907)	ENSUMAG00000021909	NBEAL1 (ENSUMAG00000021925)	CYP20A1 (ENSUMAG00000022062)	ABI2 (ENSUMAG00000022146)	RAPH1 (ENSUMAG00000022157)	ENSUMAG00000022213
Giant Panda	MODERN SPECIES	11	NIF3L1 (ENSAMEG00000005921)	ORC2 (ENSAMEG00000005940)	HYCC2 (ENSAMEG00000005996)	ENSAMEG00000006027	CFLAR (ENSAMEG00000006033)	CASP10 (ENSAMEG00000006047)	ENSAMEG00000006088	TRAK2 (ENSAMEG00000006116)	STRADB (ENSAMEG00000006175)	C2CD6 (ENSAMEG00000023801)	ENSAMEG00000030216	TMEM237 (ENSAMEG00000013442) #18	MPP4 (ENSAMEG00000013343) #19	ALS2 (ENSAMEG00000013264) #20	CDK15 (ENSAMEG00000013241) #21	FZD7 (ENSAMEG00000019023) #22	KIAA2012 (ENSAMEG00000013230) #23	ENSAMEG00000013225 ##26	NOP58 (ENSAMEG00000013168)	ENSAMEG00000030387	BMPR2 (ENSAMEG00000013148)	ENSAMEG00000013132	ENSAMEG00000026389	ICA1L (ENSAMEG00000013120)	WDR12 (ENSAMEG00000013091)	CARF (ENSAMEG00000013068)	NBEAL1 (ENSAMEG00000013020)	ABI2 (ENSAMEG00000012960)	ENSAMEG00000002970	ENSAMEG00000030945	ENSAMEG00000028551
Mustelinae	ANCESTRAL SPECIES	44	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202.j	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Ferret	MODERN SPECIES	265	NIF3L1 (ENSMPUG00000000206)	ORC2 (ENSMPUG00000000208)	HYCC2 (ENSMPUG00000000212)	CFLAR (ENSMPUG00000000230)	CASP10 (ENSMPUG00000000231)	CASP8 (ENSMPUG00000000240)	FLACC1 (ENSMPUG00000000243)	ENSMPUG00000000245	ENSMPUG00000000247	STRADB (ENSMPUG00000000249)	ENSMPUG00000000250	TMEM237 (ENSMPUG00000000252) #18	MPP4 (ENSMPUG00000000255) #19	ALS2 (ENSMPUG00000000314) #20	CDK15 (ENSMPUG00000000322) #21	FZD7 (ENSMPUG00000018904) #22	ENSMPUG00000000326 #23	ENSMPUG00000000334	ENSMPUG00000000335 ##26	NOP58 (ENSMPUG00000000351)	BMPR2 (ENSMPUG00000000354)	FAM117B (ENSMPUG00000000358)	ICA1L (ENSMPUG00000000375)	WDR12 (ENSMPUG00000000379)	CARF (ENSMPUG00000000382)	NBEAL1 (ENSMPUG00000000385)	ENSMPUG00000000395	ENSMPUG00000000397	ABI2 (ENSMPUG00000000402)	RAPH1 (ENSMPUG00000000405)	CD28 (ENSMPUG00000000418)
American mink	MODERN SPECIES	40	NIF3L (ENSNVIG00000008895)	ORC2 (ENSNVIG00000008870)	HYCC2 (ENSNVIG00000008829)	NDUB3 (ENSNVIG00000008792)	CFLAR (ENSNVIG00000008667)	CASP10 (ENSNVIG00000008626)	CASP8 (ENSNVIG00000008522)	G5E9S3 (ENSNVIG00000008480)	TRAK2 (ENSNVIG00000008449)	STRADB (ENSNVIG00000008385)	ENSNVIG00000008322	TMEM237 (ENSNVIG00000008223) #18	MPP4 (ENSNVIG00000008115) #19	ALS2 (ENSNVIG00000007935) #20	CDK15 (ENSNVIG00000007812) #21	FZD7 (ENSNVIG00000007800) #22	KIAA2012 (ENSNVIG00000007730) #23	SUMO1 (ENSNVIG00000007649) ##26	NOP58 (ENSNVIG00000007538)	BMPR2 (ENSNVIG00000007469)	ENSNVIG00000007447	ENSNVIG00000007441	ICA1L (ENSNVIG00000007376)	WDR12 (ENSNVIG00000007326)	F6SXV3 (ENSNVIG00000007220)	NBEAL1 (ENSNVIG00000007140)	CYP20A1 (ENSNVIG00000007093)	ABI2 (ENSNVIG00000006920)	RAPH1 (ENSNVIG00000006475)	ENSNVIG00000006462	CD28 (ENSNVIG00000006426)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Equus	ANCESTRAL SPECIES	18	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT01090000263468	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Donkey	MODERN SPECIES	24	NDUFB3 (ENSEASG00005034994)	CFLAR (ENSEASG00005001994)	CASP10 (ENSEASG00005002004)	ENSEASG00005002020	CASP8 (ENSEASG00005002028)	FLACC1 (ENSEASG00005036939)	ENSEASG00005024189	TRAK2 (ENSEASG00005002035)	STRADB (ENSEASG00005002039)	ENSEASG00005023565	ENSEASG00005002045	TMEM237 (ENSEASG00005002051) #18	MPP4 (ENSEASG00005002081) #19	ALS2 (ENSEASG00005002332) #20	CDK15 (ENSEASG00005002347) #21	FZD7 (ENSEASG00005035989) #22	KIAA2012 (ENSEASG00005002371) #23	ENSEASG00005024896 ##26	ENSEASG00005034084	NOP58 (ENSEASG00005002393)	ENSEASG00005035566	ENSEASG00005028104	BMPR2 (ENSEASG00005002457)	FAM117B (ENSEASG00005031822)	ICA1L (ENSEASG00005002554)	ENSEASG00005027147	WDR12 (ENSEASG00005002567)	CARF (ENSEASG00005002591)	NBEAL1 (ENSEASG00005002684)	CYP20A1 (ENSEASG00005002770)	ABI2 (ENSEASG00005002778)
Horse	MODERN SPECIES	9	NDUFB3 (ENSECAG00000020674)	CFLAR (ENSECAG00000021300)	CASP10 (ENSECAG00000024244)	ENSECAG00000030369	CASP8 (ENSECAG00000005210)	FLACC1 (ENSECAG00000008300)	TRAK2 (ENSECAG00000010581)	STRADB (ENSECAG00000018298)	C2CD6 (ENSECAG00000029271)	ENSECAG00000044178	ENSECAG00000056360	TMEM237 (ENSECAG00000019645) #18	MPP4 (ENSECAG00000022800) #19	ALS2 (ENSECAG00000009855) #20	CDK15 (ENSECAG00000023938) #21	FZD7 (ENSECAG00000024319) #22	KIAA2012 (ENSECAG00000024325) #23	SUMO1 (ENSECAG00000024693) ##26	NOP58 (ENSECAG00000024696)	BMPR2 (ENSECAG00000025141)	ENSECAG00000054476	FAM117B (ENSECAG00000004249)	ICA1L (ENSECAG00000009288)	WDR12 (ENSECAG00000009547)	CARF (ENSECAG00000017624)	NBEAL1 (ENSECAG00000020049)	CYP20A1 (ENSECAG00000010884)	ABI2 (ENSECAG00000018236)	ENSECAG00000022376	CD28 (ENSECAG00000022853)	CTLA4 (ENSECAG00000003996)
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Microbat	MODERN SPECIES	940	ENSMLUG00000028281	CFLAR (ENSMLUG00000005920)	ENSMLUG00000022617	ENSMLUG00000030008	CASP8 (ENSMLUG00000015535)	FLACC1 (ENSMLUG00000015546)	TRAK2 (ENSMLUG00000004915)	STRADB (ENSMLUG00000017558)	ENSMLUG00000026061	ENSMLUG00000017559	TMEM237 (ENSMLUG00000017562) #18	MPP4 (ENSMLUG00000017563) #19	ALS2 (ENSMLUG00000017564) #20	ENSMLUG00000002501	CDK15 (ENSMLUG00000017566) #21	FZD7 (ENSMLUG00000010034) #22	ENSMLUG00000010077 #23	ENSMLUG00000007504 ##26	NOP58 (ENSMLUG00000006896)	BMPR2 (ENSMLUG00000014783)	FAM117B (ENSMLUG00000013812)	ENSMLUG00000024540	ENSMLUG00000030619	ENSMLUG00000026446	ENSMLUG00000027037	ENSMLUG00000023829	ENSMLUG00000010834	ENSMLUG00000015108	ENSMLUG00000016762	ENSMLUG00000022794	ICA1L (ENSMLUG00000002746)
Greater horseshoe bat	MODERN SPECIES	26	ORC2 (ENSRFEG00010017722)	HYCC2 (ENSRFEG00010017661)	ENSRFEG00010017622	CFLAR (ENSRFEG00010017495)	ENSRFEG00010017455	CASP10 (ENSRFEG00010017431)	CASP8 (ENSRFEG00010017380)	FLACC1 (ENSRFEG00010017170)	TRAK2 (ENSRFEG00010017061)	STRADB (ENSRFEG00010016984)	ENSRFEG00010016786	TMEM237 (ENSRFEG00010016673) #18	MPP4 (ENSRFEG00010016493) #19	ALS2 (ENSRFEG00010016365) #20	CDK15 (ENSRFEG00010015620) #21	FZD7 (ENSRFEG00010015580) #22	KIAA2012 (ENSRFEG00010015222) #23	SUMO1 (ENSRFEG00010014996) ##26	NOP58 (ENSRFEG00010014939)	RPL39_1 (ENSRFEG00010014922)	BMPR2 (ENSRFEG00010014707)	FAM117B (ENSRFEG00010014554)	ICA1L (ENSRFEG00010014466)	WDR12 (ENSRFEG00010014405)	CARF (ENSRFEG00010013855)	NBEAL1 (ENSRFEG00010013724)	CYP20A1 (ENSRFEG00010013600)	ABI2 (ENSRFEG00010013372)	RAPH1 (ENSRFEG00010013239)	CD28 (ENSRFEG00010013138)	ENSRFEG00010013108
Eulipotyphla	ANCESTRAL SPECIES	753																ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26
Common shrew	MODERN SPECIES	3860																FZD7 (ENSSARG00000008156) #22	ENSSARG00000008173 #23	ENSSARG00000008195 #23	SUMO1 (ENSSARG00000008205) ##26
Hedgehog	MODERN SPECIES	15113																FZD7 (ENSEEUG00000013281) #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Xenarthra	ANCESTRAL SPECIES	28	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319.u.b ##26	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041
Armadillo	MODERN SPECIES	1606	ORC2 (ENSDNOG00000001397)	ENSDNOG00000007984	NDUFB3 (ENSDNOG00000036366)	CFLAR (ENSDNOG00000018748)	CASP10 (ENSDNOG00000013716)	CASP8 (ENSDNOG00000035172)	FLACC1 (ENSDNOG00000014593)	ENSDNOG00000036495	STRADB (ENSDNOG00000003778)	ENSDNOG00000047748	ENSDNOG00000003786	ENSDNOG00000002126 #18	MPP4 (ENSDNOG00000002127) #19	ALS2 (ENSDNOG00000002128) #20	CDK15 (ENSDNOG00000007655) #21	FZD7 (ENSDNOG00000041349) #22	KIAA2012 (ENSDNOG00000004441) #23	ENSDNOG00000015868 ##26	NOP58 (ENSDNOG00000002285)	BMPR2 (ENSDNOG00000013862)	FAM117B (ENSDNOG00000032587)	ICA1L (ENSDNOG00000032118)	WDR12 (ENSDNOG00000047282)	CARF (ENSDNOG00000025534)	NBEAL1 (ENSDNOG00000008235)
Sloth	MODERN SPECIES	8514																FZD7 (ENSCHOG00000013903) #22
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319.b	ENSGT00940000160319.a	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854.z.b #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319.b	ENSGT00940000160319.a	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854.z.b #23	ENSGT00940000154319.v ##26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Elephant	MODERN SPECIES	301	CFLAR (ENSLAFG00000021855)	ENSLAFG00000002296	ENSLAFG00000025656	ENSLAFG00000032402	CASP8 (ENSLAFG00000018282)	FLACC1 (ENSLAFG00000018288)	TRAK2 (ENSLAFG00000026814)	STRADB (ENSLAFG00000014838)	ENSLAFG00000027906	ENSLAFG00000030241	ENSLAFG00000014846	TMEM237 (ENSLAFG00000011936) #18	MPP4 (ENSLAFG00000011943) #19	ALS2 (ENSLAFG00000011953) #20	CDK15 (ENSLAFG00000012833) #21	FZD7 (ENSLAFG00000000464) #22	ENSLAFG00000000462 #23	ENSLAFG00000022855 ##26	NOP58 (ENSLAFG00000015568)	BMPR2 (ENSLAFG00000015201)	FAM117B (ENSLAFG00000006427)	ICA1L (ENSLAFG00000016989)	WDR12 (ENSLAFG00000011955)	CARF (ENSLAFG00000017289)	ENSLAFG00000020653	ENSLAFG00000015098	CYP20A1 (ENSLAFG00000015110)	ABI2 (ENSLAFG00000015117)	ENSLAFG00000015135	ENSLAFG00000031357	CD28 (ENSLAFG00000017773)
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209.a	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209.a	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.e	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209.a	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A.a	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT01030000234979.a	ENSGT00530000063873.A
Common wonbat	MODERN SPECIES	1038	HYCC2 (ENSVURG00010008776)	ENSVURG00010008768	ENSVURG00010008758	CFLAR (ENSVURG00010008748)	ENSVURG00010008731	ENSVURG00010008722	CASP8 (ENSVURG00010008700)	TRAK2 (ENSVURG00010008653)	STRADB (ENSVURG00010008621)	ENSVURG00010008610	ENSVURG00010008599	TMEM237 (ENSVURG00010008490) #18	MPP4 (ENSVURG00010006829) #19	ALS2 (ENSVURG00010006744) #20	CDK15 (ENSVURG00010006676) #21	FZD7 (ENSVURG00010006641) #22	SUMO1 (ENSVURG00010006638) #26	ENSVURG00010005919	BMPR2 (ENSVURG00010005868)	FAM117B (ENSVURG00010005827)	ICA1L (ENSVURG00010005759)	WDR12 (ENSVURG00010005744)	CARF (ENSVURG00010005670)	NBEAL1 (ENSVURG00010005633)	ENSVURG00010005614	CYP20A1 (ENSVURG00010005594)	ABI2 (ENSVURG00010005572)	RAPH1 (ENSVURG00010005515)	ENSVURG00010005495	ENSVURG00010005489	CD28 (ENSVURG00010005486)
koala	MODERN SPECIES	7	NIF3L1 (ENSPCIG00000019334)	ORC2 (ENSPCIG00000034597)	HYCC2 (ENSPCIG00000019013)	ENSPCIG00000019113	CFLAR (ENSPCIG00000019111)	ENSPCIG00000019109	CASP8 (ENSPCIG00000019107)	ENSPCIG00000019085	TRAK2 (ENSPCIG00000019074)	STRADB (ENSPCIG00000019067)	ENSPCIG00000035941	TMEM237 (ENSPCIG00000012085) #18	MPP4 (ENSPCIG00000012099) #19	ALS2 (ENSPCIG00000031642) #20	CDK15 (ENSPCIG00000008848) #21	FZD7 (ENSPCIG00000008847) #22	ENSPCIG00000008846 #23	SUMO1 (ENSPCIG00000008844) #26	ENSPCIG00000013968	KCNV1 (ENSPCIG00000025278)	SYBU (ENSPCIG00000025279)	ENSPCIG00000025280	PKHD1L1 (ENSPCIG00000025284)	ENY2 (ENSPCIG00000025325)	NUDCD1 (ENSPCIG00000025328)	TRHR (ENSPCIG00000025338)	TMEM74 (ENSPCIG00000025339)	EMC2 (ENSPCIG00000013521)	ENSPCIG00000031770	RSPO2 (ENSPCIG00000013528)	ANGPT1 (ENSPCIG00000013533)
Wallaby	MODERN SPECIES	12419																FZD7 (ENSMEUG00000012679) #22
Tasmanian devil	MODERN SPECIES	2	NIF3L1 (ENSSHAG00000012698)	ORC2 (ENSSHAG00000012779)	HYCC2 (ENSSHAG00000013139)	NDUFB3 (ENSSHAG00000013520)	CFLAR (ENSSHAG00000013869)	ENSSHAG00000021117	CASP8 (ENSSHAG00000000760)	ENSSHAG00000023296	TRAK2 (ENSSHAG00000024925)	STRADB (ENSSHAG00000030376)	ENSSHAG00000023780	TMEM237 (ENSSHAG00000015037) #18	MPP4 (ENSSHAG00000014864) #19	ALS2 (ENSSHAG00000014644) #20	CDK15 (ENSSHAG00000013964) #21	FZD7 (ENSSHAG00000012997) #22	ENSSHAG00000012030 #23	ENSSHAG00000022830	NOP58 (ENSSHAG00000011398)	BMPR2 (ENSSHAG00000009795)	FAM117B (ENSSHAG00000008247)	ICA1L (ENSSHAG00000007656)	WDR12 (ENSSHAG00000006960)	CARF (ENSSHAG00000006210)	NBEAL1 (ENSSHAG00000000284)	ENSSHAG00000021267	CYP20A1 (ENSSHAG00000028734)	ABI2 (ENSSHAG00000008450)	ENSSHAG00000007679	CD28 (ENSSHAG00000028743)	CTLA4 (ENSSHAG00000016177)
Opossum	MODERN SPECIES	6	TBL1XR1 (ENSMODG00000021312)	ENSMODG00000027370	ENSMODG00000021313	ENSMODG00000051427	ENSMODG00000024795	NAALADL2 (ENSMODG00000021314)	NLGN1 (ENSMODG00000021315)	SPATA16 (ENSMODG00000021318)	ECT2 (ENSMODG00000021319)	NCEH1 (ENSMODG00000051563)	TNFSF10 (ENSMODG00000041585)	GHSR (ENSMODG00000021322)	FNDC3B (ENSMODG00000021323)	ALS2 (ENSMODG00000016329) #20	CDK15 (ENSMODG00000016326) #21	FZD7 (ENSMODG00000016310) #22	ENSMODG00000025491 #23	SUMO1 (ENSMODG00000045712) #26	NOP58 (ENSMODG00000016294)	ENSMODG00000040173	BMPR2 (ENSMODG00000016287)	FAM117B (ENSMODG00000016284)	ICA1L (ENSMODG00000016279)	WDR12 (ENSMODG00000016275)	CARF (ENSMODG00000016272)	ENSMODG00000047566	NBEAL1 (ENSMODG00000016268)	ENSMODG00000037522	CYP20A1 (ENSMODG00000016255)	ABI2 (ENSMODG00000016244)	ENSMODG00000016237
Sauria	ANCESTRAL SPECIES	32	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Episquamata	ANCESTRAL SPECIES		ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199.l	ENSGT00530000064199.k	ENSGT00940000160994	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000163579	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199.l	ENSGT00530000064199.k	ENSGT00940000160994	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00950000185065	ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Elapidae	ANCESTRAL SPECIES		ENSGT00940000159722	ENSGT00940000163579	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199.l	ENSGT00530000064199.k	ENSGT00940000160994	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00950000185065	ENSGT00390000003964.b	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089.g	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Indian cobra	MODERN SPECIES		BZW1 (ENSNNAG00000010016)	CLK1 (ENSNNAG00000009956)	ENSNNAG00000009941	NIF3L1 (ENSNNAG00000009910)	ORC2 (ENSNNAG00000009852)	HYCC2 (ENSNNAG00000009742)	NDUFB3 (ENSNNAG00000009702)	CFLAR (ENSNNAG00000009607)	CASP10 (ENSNNAG00000009584)	TRAK2 (ENSNNAG00000009496)	STRADB (ENSNNAG00000009431)	TMEM237 (ENSNNAG00000009398) #18	MPP4 (ENSNNAG00000009104) #19	ENSNNAG00000009075 #20	CDK15 (ENSNNAG00000009009) #21	FZD7 (ENSNNAG00000008987) #22	ENSNNAG00000008934 #23	SUMO1 (ENSNNAG00000008916) #26	NOP58 (ENSNNAG00000008788)	BMPR2 (ENSNNAG00000008749)	FAM117B (ENSNNAG00000008713)	WDR12 (ENSNNAG00000008654)	ENSNNAG00000008600	NBEAL1 (ENSNNAG00000008400)	ENSNNAG00000008350	CYP20A1 (ENSNNAG00000008325)	ABI2 (ENSNNAG00000008284)	RAPH1 (ENSNNAG00000007996)	CD28 (ENSNNAG00000007953)	CTLA4 (ENSNNAG00000007939)	ICOS (ENSNNAG00000007918)
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00940000159722	ENSGT00940000163579	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199.l	ENSGT00530000064199.k	ENSGT00940000160994	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00950000185065	ENSGT00390000003964.b	ENSGT00940000155041.k	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089.g	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000159722	ENSGT00940000163579	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199.l	ENSGT00530000064199.k	ENSGT00940000160994	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000003964.b	ENSGT00940000155041.k	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089.g	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00960000192985
Eastern brown snake	MODERN SPECIES	7	CLK1 (ENSPTXG00000002661)	ENSPTXG00000002657	NIF3L1 (ENSPTXG00000002654)	ORC2 (ENSPTXG00000002651)	HYCC2 (ENSPTXG00000002649)	NDUFB3 (ENSPTXG00000002643)	ENSPTXG00000002639	ENSPTXG00000002638	CASP10 (ENSPTXG00000002635)	TRAK2 (ENSPTXG00000002629)	STRADB (ENSPTXG00000002626)	TMEM237 (ENSPTXG00000002623) #18	MPP4 (ENSPTXG00000001960) #19	ALS2 (ENSPTXG00000001954) #20	CDK15 (ENSPTXG00000001951) #21	FZD7 (ENSPTXG00000001949) #22	SUMO1 (ENSPTXG00000001946) #26	NOP58 (ENSPTXG00000001936)	BMPR2 (ENSPTXG00000001478)	FAM117B (ENSPTXG00000001469)	WDR12 (ENSPTXG00000001465)	ENSPTXG00000001462	ENSPTXG00000001457	ENSPTXG00000001453	NBEAL1 (ENSPTXG00000000682)	ENSPTXG00000000572	ABI2 (ENSPTXG00000000562)	RAPH1 (ENSPTXG00000000537)	ENSPTXG00000000517	ENSPTXG00000000508	CD28 (ENSPTXG00000000498)
Mainland tiger snake	MODERN SPECIES	150											STRADB (ENSNSUG00000009604)	ENSNSUG00000009603	MPP4 (ENSNSUG00000009382) #19	ALS2 (ENSNSUG00000009379) #20	CDK15 (ENSNSUG00000009376) #21	FZD7 (ENSNSUG00000009374) #22	SUMO1 (ENSNSUG00000009373) #26	NOP58 (ENSNSUG00000009368)	BMPR2 (ENSNSUG00000009356)	FAM117B (ENSNSUG00000009353)	WDR12 (ENSNSUG00000009351)	ENSNSUG00000009349	ENSNSUG00000009348	ENSNSUG00000009347	CYP20A1 (ENSNSUG00000009346)	ABI2 (ENSNSUG00000009335)	RAPH1 (ENSNSUG00000009331)	ENSNSUG00000009323	ENSNSUG00000009322	ENSNSUG00000009321
Blue-lipped sea krait	MODERN SPECIES	6937																FZD7 (ENSLLTG00000012439) #22
Lizard	MODERN SPECIES	822															ENSACAG00000005151	FZD7 (ENSACAG00000005157) #22	ENSACAG00000024914 #23	SUMO1 (ENSACAG00000005177) #26	NOP58 (ENSACAG00000005194)	BMPR2 (ENSACAG00000004885)	FAM117B (ENSACAG00000004859)	WDR12 (ENSACAG00000004774)	ENSACAG00000004755	ENSACAG00000043702	ENSACAG00000037627	NBEAL1 (ENSACAG00000004721)	ENSACAG00000004658	CYP20A1 (ENSACAG00000004604)	ENSACAG00000045333	ABI2 (ENSACAG00000004539)	RAPH1 (ENSACAG00000004500)
Laterata	ANCESTRAL SPECIES	42	ENSGT00940000159722	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199.l	ENSGT00530000064199.k	ENSGT00940000160994	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00950000183314 #25	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00950000183214.a.b.a.b	ENSGT00940000155270
Common wall lizard	MODERN SPECIES		PLCL1 (ENSPMRG00000005188)	BOLL (ENSPMRG00000005191)	RFTN2 (ENSPMRG00000005194)	MOB4 (ENSPMRG00000005201)	ENSPMRG00000005210	ENSPMRG00000005220	COQ10B (ENSPMRG00000005252)	SF3B1 (ENSPMRG00000005261)	ANKRD44 (ENSPMRG00000005384)	PGAP1 (ENSPMRG00000006002)	GTF3C3 (ENSPMRG00000006178)	ENSPMRG00000006458	MPP4 (ENSPMRG00000006532) #19	ALS2 (ENSPMRG00000006747) #20	CDK15 (ENSPMRG00000006777) #21	FZD7 (ENSPMRG00000006785) #22	ENSPMRG00000006788 #25	NOP58 (ENSPMRG00000006794)	BMPR2 (ENSPMRG00000006815)	ENSPMRG00000006832	ENSPMRG00000006842	WDR12 (ENSPMRG00000006856)	ENSPMRG00000006909	CARF (ENSPMRG00000006921)	ENSPMRG00000006930	NBEAL1 (ENSPMRG00000007358)	CYP20A1 (ENSPMRG00000008728)	ABI2 (ENSPMRG00000008747)	RAPH1 (ENSPMRG00000008789)	CD28 (ENSPMRG00000008873)	CTLA4 (ENSPMRG00000008883)
Argentine black and white tegu	MODERN SPECIES	12	MYL1 (ENSSMRG00000020818)	ACADL (ENSSMRG00000020817)	KANSL1L (ENSSMRG00000020816)	ENSSMRG00000020815	UNC80 (ENSSMRG00000020808)	ENSSMRG00000020807	ENSSMRG00000020804	ENSSMRG00000020802	ENSSMRG00000020801	STRADB (ENSSMRG00000020800)	ENSSMRG00000020799	TMEM237 (ENSSMRG00000020798) #18	MPP4 (ENSSMRG00000020796) #19	ALS2 (ENSSMRG00000020795) #20	CDK15 (ENSSMRG00000020794) #21	FZD7 (ENSSMRG00000020792) #22	ENSSMRG00000020791	KIAA2012 (ENSSMRG00000020790) #23	SUMO1 (ENSSMRG00000020789) #26	NOP58 (ENSSMRG00000020786)	BMPR2 (ENSSMRG00000020784)	FAM117B (ENSSMRG00000020783)	WDR12 (ENSSMRG00000020782)	ENSSMRG00000020781	NBEAL1 (ENSSMRG00000020780)	ENSSMRG00000020779	CYP20A1 (ENSSMRG00000020778)	ABI2 (ENSSMRG00000020777)	RAPH1 (ENSSMRG00000020776)	ENSSMRG00000020658	CTLA4 (ENSSMRG00000020651)
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00390000003964.b	ENSGT00950000185065	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00400000022323	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00950000185065	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00950000185065	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552
Emydidae	ANCESTRAL SPECIES	4	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000018209	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00950000185065	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
painted turtle	MODERN SPECIES	2	NIF3L1 (ENSCPBG00000011743)	ORC2 (ENSCPBG00000011736)	HYCC2 (ENSCPBG00000011729)	NDUFB3 (ENSCPBG00000011726)	ENSCPBG00000011723	ENSCPBG00000011719	CASP8 (ENSCPBG00000011716)	FLACC1 (ENSCPBG00000011709)	TRAK2 (ENSCPBG00000011705)	STRADB (ENSCPBG00000011698)	ENSCPBG00000011694	TMEM237 (ENSCPBG00000011689) #18	MPP4 (ENSCPBG00000011594) #19	ALS2 (ENSCPBG00000011591) #20	CDK15 (ENSCPBG00000011587) #21	FZD7 (ENSCPBG00000011582) #22	KIAA2012 (ENSCPBG00000011578) #23	SUMO1 (ENSCPBG00000011575) #26	NOP58 (ENSCPBG00000011565)	BMPR2 (ENSCPBG00000011298)	ENSCPBG00000011285	ENSCPBG00000011283	ICA1L (ENSCPBG00000011260)	WDR12 (ENSCPBG00000011256)	CARF (ENSCPBG00000011242)	ENSCPBG00000011238	NBEAL1 (ENSCPBG00000008970)	ENSCPBG00000008883	CYP20A1 (ENSCPBG00000008879)	ABI2 (ENSCPBG00000008865)	RAPH1 (ENSCPBG00000008797)
Three-toed box turtle	MODERN SPECIES	25	PPIL3 (ENSTMTG00000009721)	NIF3L1 (ENSTMTG00000009742)	ORC2 (ENSTMTG00000009760)	HYCC2 (ENSTMTG00000009797)	NDUFB3 (ENSTMTG00000009826)	CFLAR (ENSTMTG00000009842)	CASP10 (ENSTMTG00000009875)	ENSTMTG00000009900	CASP8 (ENSTMTG00000009929)	TRAK2 (ENSTMTG00000009961)	STRADB (ENSTMTG00000010068)	TMEM237 (ENSTMTG00000010099) #18	MPP4 (ENSTMTG00000010162) #19	ALS2 (ENSTMTG00000010542) #20	CDK15 (ENSTMTG00000010659) #21	FZD7 (ENSTMTG00000010912) #22	SUMO1 (ENSTMTG00000010925) #26	NOP58 (ENSTMTG00000010944)	BMPR2 (ENSTMTG00000011025)	FAM117B (ENSTMTG00000011056)	ICA1L (ENSTMTG00000011077)	WDR12 (ENSTMTG00000011113)	CARF (ENSTMTG00000011136)	ENSTMTG00000011258	NBEAL1 (ENSTMTG00000011535)	ENSTMTG00000000064	ABI2 (ENSTMTG00000000124)	RAPH1 (ENSTMTG00000000330)	CD28 (ENSTMTG00000000707)	CTLA4 (ENSTMTG00000000717)	ICOS (ENSTMTG00000000728)
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316.d	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00950000185065	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000176171	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A
Goode s thornscrub tortoise	MODERN SPECIES	2	PPIL3 (ENSGEVG00005013737)	NIF3L1 (ENSGEVG00005013708)	ORC2 (ENSGEVG00005013508)	HYCC2 (ENSGEVG00005013408)	ENSGEVG00005013378	CFLAR (ENSGEVG00005013349)	CASP10 (ENSGEVG00005013305)	ENSGEVG00005013257	CASP8 (ENSGEVG00005013203)	TRAK2 (ENSGEVG00005013111)	STRADB (ENSGEVG00005013022)	TMEM237 (ENSGEVG00005012993) #18	MPP4 (ENSGEVG00005012348) #19	ALS2 (ENSGEVG00005012121) #20	CDK15 (ENSGEVG00005011981) #21	FZD7 (ENSGEVG00005011937) #22	SUMO1 (ENSGEVG00005011902) #26	NOP58 (ENSGEVG00005011819)	BMPR2 (ENSGEVG00005011391)	FAM117B (ENSGEVG00005011292)	ICA1L (ENSGEVG00005011235)	WDR12 (ENSGEVG00005011195)	CARF (ENSGEVG00005011158)	ENSGEVG00005011079	NBEAL1 (ENSGEVG00005007841)	ENSGEVG00005007312	CYP20A1 (ENSGEVG00005007271)	ENSGEVG00005007253	ABI2 (ENSGEVG00005007221)	RAPH1 (ENSGEVG00005007171)	CD28 (ENSGEVG00005007000)
Chinese turtle	MODERN SPECIES	1653													MPP4 (ENSPSIG00000010356) #19	ALS2 (ENSPSIG00000011464) #20	CDK15 (ENSPSIG00000009784) #21	FZD7 (ENSPSIG00000010126) #22	ENSPSIG00000010428 #23	ENSPSIG00000011127 #23	SUMO1 (ENSPSIG00000011513) #26	NOP58 (ENSPSIG00000011773)	BMPR2 (ENSPSIG00000013650)
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00950000185065	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B	ENSGT00390000000801
Aves	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00390000003964.b	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b.d	ENSGT00940000157249	ENSGT00940000155408.b	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Anatidae	ANCESTRAL SPECIES	10	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00950000182997.a.b.b.a	ENSGT01100000263556.a.a	ENSGT00940000161997.a	ENSGT00390000011570	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b.d	ENSGT00940000157249	ENSGT00940000155408.b	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Duck	MODERN SPECIES	882																FZD7 (ENSAPLG00000001633) #22
Pink-footed goose	MODERN SPECIES	120	ENSABRG00000015106	ENSABRG00000015109	ENSABRG00000015127	ITGB2 (ENSABRG00000015145)	KMO (ENSABRG00000015152)	C21orf58 (ENSABRG00000015157)	PCNT (ENSABRG00000015167)	DIP2A (ENSABRG00000015208)	ENSABRG00000015533	S100B (ENSABRG00000015550)	LSS (ENSABRG00000015601)	TMEM237 (ENSABRG00000015767) #18	MPP4 (ENSABRG00000015774) #19	ALS2 (ENSABRG00000016154) #20	CDK15 (ENSABRG00000016478) #21	FZD7 (ENSABRG00000016510) #22	SUMO1 (ENSABRG00000016513) #26	NOP58 (ENSABRG00000016523)	BMPR2 (ENSABRG00000016558)	FAM117B (ENSABRG00000016605)	WDR12 (ENSABRG00000016630)	CARF (ENSABRG00000016665)	PLEKHM3 (ENSABRG00000016681)	ENSABRG00000016686	ENSABRG00000016702	ENSABRG00000016786	CREB1 (ENSABRG00000016788)	KLF7 (ENSABRG00000016797)	CPO (ENSABRG00000016806)	FASTKD2 (ENSABRG00000016816)	MDH1B (ENSABRG00000016828)
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994.m	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b.d	ENSGT00940000157249	ENSGT00940000155408.b	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Japanese quail	MODERN SPECIES	25	PPIL3 (ENSCJPG00005015235)	ORC2 (ENSCJPG00005015236)	HYCC2 (ENSCJPG00005015237)	NDUFB3 (ENSCJPG00005015241)	CFLAR (ENSCJPG00005015242)	ENSCJPG00005015243	ENSCJPG00005015244	ENSCJPG00005015245	CASP8 (ENSCJPG00005015246)	TRAK2 (ENSCJPG00005015247)	STRADB (ENSCJPG00005015293)	TMEM237 (ENSCJPG00005015294) #18	MPP4 (ENSCJPG00005015295) #19	ALS2 (ENSCJPG00005015296) #20	CDK15 (ENSCJPG00005015326) #21	FZD7 (ENSCJPG00005015328) #22	ENSCJPG00005015329	SUMO1 (ENSCJPG00005015331) #26	NOP58 (ENSCJPG00005015334)	BMPR2 (ENSCJPG00005015341)	FAM117B (ENSCJPG00005015342)	WDR12 (ENSCJPG00005015343)	CARF (ENSCJPG00005015344)	PLEKHM3 (ENSCJPG00005015346)	ENSCJPG00005015348	ENSCJPG00005015349	METTL21A (ENSCJPG00005015350)	CREB1 (ENSCJPG00005015351)	KLF7 (ENSCJPG00005015354)	CPO (ENSCJPG00005015355)	FASTKD2 (ENSCJPG00005015357)
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994.m	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b.d	ENSGT00940000157249	ENSGT00940000155408.b	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Chicken	MODERN SPECIES	36	PPIL3 (ENSGALG00010024807)	NIF3L1 (ENSGALG00010024811)	ORC2 (ENSGALG00010024830)	HYCC2 (ENSGALG00010024845)	NDUFB3 (ENSGALG00010024869)	CFLAR (ENSGALG00010024876)	CASP10 (ENSGALG00010024881)	CASP18 (ENSGALG00010024887)	CASP8 (ENSGALG00010024903)	TRAK2 (ENSGALG00010024917)	STRADB (ENSGALG00010024921)	TMEM237 (ENSGALG00010024930) #18	MPP4 (ENSGALG00010024947) #19	ALS2 (ENSGALG00010025055) #20	CDK15 (ENSGALG00010025071) #21	FZD7 (ENSGALG00010026264) #22	SUMO1 (ENSGALG00010025131) #26	NOP58 (ENSGALG00010025157)	BMPR2 (ENSGALG00010025207)	FAM117B (ENSGALG00010025222)	WDR12 (ENSGALG00010025233)	CARF (ENSGALG00010025262)	PLEKHM3 (ENSGALG00010025312)	FZD5 (ENSGALG00010025333)	METTL21A (ENSGALG00010025340)	CREB1 (ENSGALG00010025351)	KLF7 (ENSGALG00010025822)	CPO (ENSGALG00010025855)	FASTKD2 (ENSGALG00010025869)	MDH1B (ENSGALG00010025874)	DYTN (ENSGALG00010025894)
Turkey	MODERN SPECIES	27	NIF3L1 (ENSMGAG00000007653)	ORC2 (ENSMGAG00000007673)	HYCC2 (ENSMGAG00000007746)	NDUFB3 (ENSMGAG00000007771)	CFLAR (ENSMGAG00000007778)	CASP10 (ENSMGAG00000007806)	ENSMGAG00000007834	CASP8 (ENSMGAG00000007846)	TRAK2 (ENSMGAG00000007874)	STRADB (ENSMGAG00000007934)	TMEM237 (ENSMGAG00000007970) #18	MPP4 (ENSMGAG00000007983) #19	ENSMGAG00000008034 #20	ENSMGAG00000017624 #20	CDK15 (ENSMGAG00000008119) #21	FZD7 (ENSMGAG00000008142) #22	SUMO1 (ENSMGAG00000017685) #26	NOP58 (ENSMGAG00000008189)	BMPR2 (ENSMGAG00000008156)	FAM117B (ENSMGAG00000008139)	WDR12 (ENSMGAG00000008240)	CARF (ENSMGAG00000008291)	PLEKHM3 (ENSMGAG00000008315)	ENSMGAG00000016153	ENSMGAG00000008327	METTL21A (ENSMGAG00000008350)	CREB1 (ENSMGAG00000008360)	KLF7 (ENSMGAG00000008396)	CPO (ENSMGAG00000008430)	FASTKD2 (ENSMGAG00000008516)	MDH1B (ENSMGAG00000008532)
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Kakapo	MODERN SPECIES	22	NIF3L1 (ENSSHBG00005021038)	ORC2 (ENSSHBG00005021041)	HYCC2 (ENSSHBG00005021042)	NDUFB3 (ENSSHBG00005021043)	CASP10 (ENSSHBG00005021045)	ENSSHBG00005021047	ENSSHBG00005000177	CASP8 (ENSSHBG00005000189)	TRAK2 (ENSSHBG00005000199)	STRADB (ENSSHBG00005000206)	TMEM237 (ENSSHBG00005000210) #18	MPP4 (ENSSHBG00005000222) #19	ENSSHBG00005000246	ALS2 (ENSSHBG00005000252) #20	CDK15 (ENSSHBG00005000256) #21	FZD7 (ENSSHBG00005000260) #22	SUMO1 (ENSSHBG00005000263) #26	NOP58 (ENSSHBG00005002029)	BMPR2 (ENSSHBG00005002078)	FAM117B (ENSSHBG00005002099)	WDR12 (ENSSHBG00005002114)	CARF (ENSSHBG00005002136)	PLEKHM3 (ENSSHBG00005002232)	ENSSHBG00005002253	ENSSHBG00005002269	METTL21A (ENSSHBG00005002278)	CREB1 (ENSSHBG00005002287)	KLF7 (ENSSHBG00005002296)	CPO (ENSSHBG00005002311)	FASTKD2 (ENSSHBG00005002335)	MDH1B (ENSSHBG00005002354)
Golden eagle	MODERN SPECIES	22	ENSACCG00020002651	NIF3L1 (ENSACCG00020002663)	ORC2 (ENSACCG00020002685)	HYCC2 (ENSACCG00020002702)	NDUFB3 (ENSACCG00020002722)	CFLAR (ENSACCG00020002739)	CASP10 (ENSACCG00020002753)	ENSACCG00020002772	CASP8 (ENSACCG00020002787)	TRAK2 (ENSACCG00020002810)	STRADB (ENSACCG00020002846)	TMEM237 (ENSACCG00020002868) #18	MPP4 (ENSACCG00020002955) #19	ALS2 (ENSACCG00020003034) #20	CDK15 (ENSACCG00020003085) #21	FZD7 (ENSACCG00020003104) #22	SUMO1 (ENSACCG00020003114) #26	NOP58 (ENSACCG00020003127)	BMPR2 (ENSACCG00020003161)	ENSACCG00020003182	ENSACCG00020003192	WDR12 (ENSACCG00020003209)	CARF (ENSACCG00020003224)	PLEKHM3 (ENSACCG00020003252)	ENSACCG00020003288	ENSACCG00020003303	METTL21A (ENSACCG00020003321)	CREB1 (ENSACCG00020003332)	KLF7 (ENSACCG00020003351)	CPO (ENSACCG00020003371)	FASTKD2 (ENSACCG00020003396)
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000163579	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Great tit	MODERN SPECIES	27	ENSPMJG00000018171	NIF3L1 (ENSPMJG00000018172)	ORC2 (ENSPMJG00000018173)	HYCC2 (ENSPMJG00000018174)	NDUFB3 (ENSPMJG00000018175)	CFLAR (ENSPMJG00000018176)	CASP10 (ENSPMJG00000018177)	ENSPMJG00000018178	CASP8 (ENSPMJG00000018179)	TRAK2 (ENSPMJG00000018184)	STRADB (ENSPMJG00000018187)	TMEM237 (ENSPMJG00000018188) #18	MPP4 (ENSPMJG00000018190) #19	ALS2 (ENSPMJG00000018217) #20	CDK15 (ENSPMJG00000018220) #21	FZD7 (ENSPMJG00000018222) #22	SUMO1 (ENSPMJG00000018227) #26	NOP58 (ENSPMJG00000018230)	BMPR2 (ENSPMJG00000018240)	FAM117B (ENSPMJG00000018242)	WDR12 (ENSPMJG00000018243)	CARF (ENSPMJG00000018244)	PLEKHM3 (ENSPMJG00000018247)	ENSPMJG00000018250	ENSPMJG00000018252	METTL21A (ENSPMJG00000018255)	CREB1 (ENSPMJG00000018256)	KLF7 (ENSPMJG00000018257)	CPO (ENSPMJG00000018259)	FASTKD2 (ENSPMJG00000018261)	MDH1B (ENSPMJG00000018262)
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000162639	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000162639	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000153189.B	ENSGT00390000003590	ENSGT00390000015228	ENSGT00390000011295.a	ENSGT00390000010316	ENSGT00530000064199	ENSGT00940000160994	ENSGT00940000164225	ENSGT00940000160319	ENSGT00940000158202	ENSGT00940000155390	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000159743	ENSGT00940000161191.B	ENSGT00940000154453.b	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000161508	ENSGT01030000234607.A.b	ENSGT00530000063410.b
Common canary	MODERN SPECIES	8	PPIL3 (ENSSCAG00000002731)	NIF3L1 (ENSSCAG00000002725)	ORC2 (ENSSCAG00000002715)	HYCC2 (ENSSCAG00000002703)	NDUFB3 (ENSSCAG00000002696)	CFLAR (ENSSCAG00000002692)	CASP10 (ENSSCAG00000002684)	ENSSCAG00000002679	CASP8 (ENSSCAG00000002673)	TRAK2 (ENSSCAG00000002660)	STRADB (ENSSCAG00000002649)	TMEM237 (ENSSCAG00000002645) #18	MPP4 (ENSSCAG00000002617) #19	ALS2 (ENSSCAG00000002597) #20	CDK15 (ENSSCAG00000002582) #21	FZD7 (ENSSCAG00000002572) #22	SUMO1 (ENSSCAG00000002566) #26	NOP58 (ENSSCAG00000002544)	BMPR2 (ENSSCAG00000002534)	ENSSCAG00000002521	ENSSCAG00000002518	WDR12 (ENSSCAG00000002510)	CARF (ENSSCAG00000002493)	PLEKHM3 (ENSSCAG00000002482)	ENSSCAG00000002470	ENSSCAG00000002462	METTL21A (ENSSCAG00000002451)	CREB1 (ENSSCAG00000002440)	KLF7 (ENSSCAG00000002434)	CPO (ENSSCAG00000002428)	FASTKD2 (ENSSCAG00000002424)
Zebra finch	MODERN SPECIES	29	NIF3L1 (ENSTGUG00000010385)	ORC2 (ENSTGUG00000010352)	BZW1 (ENSTGUG00000010398)	HYCC2 (ENSTGUG00000023035)	NDUFB3 (ENSTGUG00000027597)	CFLAR (ENSTGUG00000010309)	CASP10 (ENSTGUG00000010306)	ENSTGUG00000010299	CASP8 (ENSTGUG00000026325)	TRAK2 (ENSTGUG00000010267)	STRADB (ENSTGUG00000010255)	TMEM237 (ENSTGUG00000010245) #18	MPP4 (ENSTGUG00000010238) #19	ALS2 (ENSTGUG00000010168) #20	CDK15 (ENSTGUG00000010151) #21	FZD7 (ENSTGUG00000010149) #22	SUMO1 (ENSTGUG00000023148) #26	NOP58 (ENSTGUG00000010124)	BMPR2 (ENSTGUG00000010107)	FAM117B (ENSTGUG00000010101)	WDR12 (ENSTGUG00000010086)	CARF (ENSTGUG00000010076)	PLEKHM3 (ENSTGUG00000010067)	ENSTGUG00000010062	ENSTGUG00000010055	METTL21A (ENSTGUG00000010049)	CREB1 (ENSTGUG00000021110)	KLF7 (ENSTGUG00000010017)	CPO (ENSTGUG00000010012)	FASTKD2 (ENSTGUG00000010004)	MDH1B (ENSTGUG00000009999)
Medium ground finch	MODERN SPECIES	1	PPIL3 (ENSGFOG00000000157)	NIF3L1 (ENSGFOG00000000152)	ORC2 (ENSGFOG00000000142)	HYCC2 (ENSGFOG00000000137)	NDUFB3 (ENSGFOG00000000135)	CFLAR (ENSGFOG00000000133)	CASP10 (ENSGFOG00000000131)	ENSGFOG00000000126	CASP8 (ENSGFOG00000000120)	TRAK2 (ENSGFOG00000000109)	STRADB (ENSGFOG00000000099)	TMEM237 (ENSGFOG00000000008) #18	MPP4 (ENSGFOG00000007211) #19	ALS2 (ENSGFOG00000007025) #20	CDK15 (ENSGFOG00000006998) #21	FZD7 (ENSGFOG00000006992) #22	SUMO1 (ENSGFOG00000006984) #26	NOP58 (ENSGFOG00000006953)	BMPR2 (ENSGFOG00000006939)	FAM117B (ENSGFOG00000006926)	ENSGFOG00000006921	WDR12 (ENSGFOG00000006866)	CARF (ENSGFOG00000006822)	PLEKHM3 (ENSGFOG00000006814)	FZD5 (ENSGFOG00000006809)	ENSGFOG00000006802	METTL21A (ENSGFOG00000006799)	CREB1 (ENSGFOG00000006794)	KLF7 (ENSGFOG00000006789)	CPO (ENSGFOG00000006781)	FASTKD2 (ENSGFOG00000006769)
Flycatcher	MODERN SPECIES	26	PPIL3 (ENSFALG00000023399)	NIF3L1 (ENSFALG00000024500)	ENSFALG00000028144	HYCC2 (ENSFALG00000004144)	NDUFB3 (ENSFALG00000004140)	CFLAR (ENSFALG00000004136)	CASP10 (ENSFALG00000004132)	ENSFALG00000004128	CASP8 (ENSFALG00000004124)	TRAK2 (ENSFALG00000004122)	STRADB (ENSFALG00000004116)	TMEM237 (ENSFALG00000004109) #18	MPP4 (ENSFALG00000004089) #19	ALS2 (ENSFALG00000004075) #20	CDK15 (ENSFALG00000004066) #21	FZD7 (ENSFALG00000015305) #22	SUMO1 (ENSFALG00000022941) #26	NOP58 (ENSFALG00000004052)	BMPR2 (ENSFALG00000004047)	FAM117B (ENSFALG00000004036)	WDR12 (ENSFALG00000004032)	CARF (ENSFALG00000004023)	PLEKHM3 (ENSFALG00000004020)	ENSFALG00000027089	METTL21A (ENSFALG00000004003)	CREB1 (ENSFALG00000003996)	ENSFALG00000023985	KLF7 (ENSFALG00000003989)	CPO (ENSFALG00000003980)	FASTKD2 (ENSFALG00000003964)	MDH1B (ENSFALG00000003957)
Australian saltwater crocodile	MODERN SPECIES	66	ENSCPRG00005000952	COASY (ENSCPRG00005000958)	HSD17B1 (ENSCPRG00005000974)	NAGLU (ENSCPRG00005001014)	ENSCPRG00005001026	CCDC43 (ENSCPRG00005001033)	MEIOC (ENSCPRG00005001066)	NSF (ENSCPRG00005001086)	WNT3 (ENSCPRG00005001110)	WNT9B (ENSCPRG00005001132)	GOSR2 (ENSCPRG00005001143)	TMEM237 (ENSCPRG00005001157) #18	MPP4 (ENSCPRG00005001214) #19	ALS2 (ENSCPRG00005001283) #20	CDK15 (ENSCPRG00005001304) #21	FZD7 (ENSCPRG00005001330) #22	SUMO1 (ENSCPRG00005001337) #26	NOP58 (ENSCPRG00005001353)	BMPR2 (ENSCPRG00005001396)	FAM117B (ENSCPRG00005001420)	ENSCPRG00005001426	WDR12 (ENSCPRG00005001450)	CARF (ENSCPRG00005001462)	ENSCPRG00005001474	NBEAL1 (ENSCPRG00005001495)	ENSCPRG00005001521	CYP20A1 (ENSCPRG00005001526)	ABI2 (ENSCPRG00005001556)	RAPH1 (ENSCPRG00005001588)	CD28 (ENSCPRG00005001690)	CTLA4 (ENSCPRG00005001699)
Anura	ANCESTRAL SPECIES	39												ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000156449	ENSGT00950000183046.a.a	ENSGT00390000005530.a.a	ENSGT00930000150950.b	ENSGT00390000013916	ENSGT00940000155041	ENSGT00390000017619	ENSGT00500000044939	ENSGT00940000156089	ENSGT00940000156552	ENSGT00530000063873.A	ENSGT00530000063873.B
Frog	MODERN SPECIES	9	ENSXETG00000046685	ENSXETG00000042410	cmklr2 (ENSXETG00000043302)	cops8 (ENSXETG00000025427)	ndufs1 (ENSXETG00000010108)	eef1b2 (ENSXETG00000010098)	ino80d (ENSXETG00000033629)	ENSXETG00000048152	nrp2 (ENSXETG00000010095)	pard3b (ENSXETG00000012407)	ICOS (ENSXETG00000040525)	als2 (ENSXETG00000012406) #20	cdk15 (ENSXETG00000012405) #21	ENSXETG00000037714	ENSXETG00000040147	fzd7 (ENSXETG00000012404) #22	kiaa2012 (ENSXETG00000041127) #23	sumo1 (ENSXETG00000022072) #26	nop58 (ENSXETG00000022073)	bmpr2 (ENSXETG00000022074)	fam117b (ENSXETG00000022076)	wdr12 (ENSXETG00000022077)	carf (ENSXETG00000031604)	nbeal1 (ENSXETG00000022086)	dnah7 (ENSXETG00000022093)	slc39a10 (ENSXETG00000022134)	aox1 (ENSXETG00000034468)	ENSXETG00000039500	aox1 (ENSXETG00000022155)	spats2l (ENSXETG00000041119)	tyw5 (ENSXETG00000031428)
Leishan spiny toad	MODERN SPECIES	10	ENSLLEG00000011462	CYP20A1 (ENSLLEG00000011493)	ENSLLEG00000011716	NBEAL1 (ENSLLEG00000011871)	CARF (ENSLLEG00000013266)	WDR12 (ENSLLEG00000014364)	ICA1L (ENSLLEG00000014714)	FAM117B (ENSLLEG00000014783)	BMPR2 (ENSLLEG00000014925)	NOP58 (ENSLLEG00000015076)	SUMO1 (ENSLLEG00000015593) #26	ENSLLEG00000015748	MPP4 (ENSLLEG00000015857) #19	ALS2 (ENSLLEG00000016168) #20	CDK15 (ENSLLEG00000016753) #21	FZD7 (ENSLLEG00000016908) #22	ENSLLEG00000017086 #23	ENSLLEG00000018581	ENSLLEG00000018606	STRADB (ENSLLEG00000018633)	ENSLLEG00000018758	ENSLLEG00000019013	ENSLLEG00000019060	ENSLLEG00000019343	CASP8 (ENSLLEG00000019623)	ENSLLEG00000019795	ENSLLEG00000019931	ENSLLEG00000020069	CASP10 (ENSLLEG00000020096)	ENSLLEG00000020352	CFLAR (ENSLLEG00000020738)
Coelacanth	MODERN SPECIES	479			CASP10 (ENSLACG00000001849)	ENSLACG00000003502	ENSLACG00000004220	ENSLACG00000022324	TRAK2 (ENSLACG00000006273)	STRADB (ENSLACG00000007552)	ENSLACG00000022406	TMEM237 (ENSLACG00000009546) #18	ENSLACG00000009994	MPP4 (ENSLACG00000010181) #19	ENSLACG00000010687	ALS2 (ENSLACG00000010844) #20	CDK15 (ENSLACG00000012204) #21	FZD7 (ENSLACG00000014068) #22	ENSLACG00000014338	ENSLACG00000014442 #23	ENSLACG00000014628	NOP58 (ENSLACG00000014882)	BMPR2 (ENSLACG00000015107)	FAM117B (ENSLACG00000016010)	ICA1L (ENSLACG00000016692)
Actinopterygii	ANCESTRAL SPECIES	116	ENSGT00940000158781	ENSGT00390000015769.B	ENSGT00940000162403	ENSGT00530000063410.b	ENSGT01030000234607.A.b	ENSGT00530000063873.B	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449
Reedfish	MODERN SPECIES	16	eef1b2 (ENSECRG00000006546)	CMKLR2 (ENSECRG00000006553)	ADAM23 (ENSECRG00000006567)	FAM237A (ENSECRG00000006588)	mdh1b (ENSECRG00000006596)	FASTKD2 (ENSECRG00000006608)	CTLA4 (ENSECRG00000006618)	raph1b (ENSECRG00000006637)	abi2b (ENSECRG00000006679)	cyp20a1 (ENSECRG00000006712)	ENSECRG00000006727	tmem237b (ENSECRG00000006739) #18	MPP4 (ENSECRG00000006757) #19	ALS2 (ENSECRG00000006808) #20	cdk15 (ENSECRG00000006849) #21	fzd7a (ENSECRG00000006864) #22	ENSECRG00000006871 #23	sumo1 (ENSECRG00000006886) #26	nop58 (ENSECRG00000006903)	CARF (ENSECRG00000006931)	ENSECRG00000006943	wdr12 (ENSECRG00000006956)	ical1 (ENSECRG00000006974)	ENSECRG00000006985	FAM117B (ENSECRG00000007001)	bmpr2a (ENSECRG00000007028)	NBEAL1 (ENSECRG00000007092)	si:dkey-69o16.5 (ENSECRG00000007152)	STRADB (ENSECRG00000007160)	TRAK2 (ENSECRG00000007185)	ENSECRG00000007218
Neopterygii	ANCESTRAL SPECIES	61			ENSGT00530000063410.b	ENSGT01030000234607.A.b	ENSGT00530000063873.B	ENSGT00530000063873.A	ENSGT00940000156552	ENSGT00390000009001	ENSGT00940000156089	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00860000133854 #23	ENSGT00940000172395	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00390000013916	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a	ENSGT00940000156449	ENSGT00940000164964.b	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00390000016940.c.b	ENSGT00940000155522	ENSGT00390000003164	ENSGT00940000154095.b.b.b
Spotted gar	MODERN SPECIES	650	ENSLOCG00000010425	ENSLOCG00000010415	CNTNAP5 (ENSLOCG00000010405)	mdh1b (ENSLOCG00000010397)	ENSLOCG00000010389	CTLA4 (ENSLOCG00000010380)	ENSLOCG00000010370	raph1b (ENSLOCG00000010348)	ENSLOCG00000010347	abi2b (ENSLOCG00000010334)	cyp20a1 (ENSLOCG00000010325)	tmem237b (ENSLOCG00000010304) #18	MPP4 (ENSLOCG00000010293) #19	ALS2 (ENSLOCG00000010268) #20	cdk15 (ENSLOCG00000010256) #21	fzd7a (ENSLOCG00000017840) #22	ENSLOCG00000010254 #23	ENSLOCG00000010244	sumo1 (ENSLOCG00000010236) #26	nop58 (ENSLOCG00000010225)	ENSLOCG00000010221	wdr12 (ENSLOCG00000010208)	ical1 (ENSLOCG00000010193)	fam117bb (ENSLOCG00000010182)	bmpr2a (ENSLOCG00000010166)	ENSLOCG00000010132	USP40 (ENSLOCG00000010114)	ENSLOCG00000010110	ENSLOCG00000010098	tmem198b (ENSLOCG00000010090)	ndufa10 (ENSLOCG00000010079)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Euacanthomorphacea	ANCESTRAL SPECIES	26	ENSGT00940000155522.g.b	ENSGT00390000016940.c.b.b	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000156884	ENSGT00940000154319 #26	ENSGT00390000005717.s	ENSGT00940000155212.ab.a	ENSGT00940000156089.f	ENSGT00940000156089.e.a	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000164897.a.b	ENSGT00940000158265	ENSGT00940000165301.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000159213.q.b	ENSGT00940000159862.b	ENSGT00940000155984.i.b	ENSGT00390000007364.j	ENSGT00940000154793.C	ENSGT00940000154365.a.b	ENSGT01090000260051.b.b.dc.a	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a
Percomorphaceae	ANCESTRAL SPECIES	22	ENSGT00390000003164	ENSGT00940000154095.b.b.a.a	ENSGT00950000183165.b.a.e.b.d.b	ENSGT00950000183165.b.a.e.a	ENSGT00950000182882.A.b.b.f	ENSGT00940000164444.b	ENSGT00390000009940	ENSGT00940000155009.b	ENSGT00940000166110	ENSGT00940000154851.A	ENSGT00940000159723	ENSGT00940000158687.a.b	ENSGT00940000156634.b	ENSGT00940000158614	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000158265	ENSGT00940000165301.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000159213.q.b	ENSGT00940000159862.b	ENSGT00940000155984.i.b	ENSGT00390000007364.j	ENSGT00940000154793.C	ENSGT00940000154365.a.b	ENSGT00390000018525.a.b.f	ENSGT00940000160000	ENSGT00390000001101	ENSGT00940000154505.A.c	ENSGT00940000157694	ENSGT00940000154474.B.b
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Perciformes	ANCESTRAL SPECIES	53															ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000158239.a.b ##22	ENSGT00980000198678	ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a	ENSGT01100000263476.E.b.a.a.b.a.a	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00390000005581.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00950000183014.f.a	ENSGT00940000166383	ENSGT00530000063715.b	ENSGT00950000182910.a.a.d	ENSGT00390000003896
Perciformes_a	ANCESTRAL SPECIES	46	ENSGT00390000018208	ENSGT00940000157133	ENSGT00950000183114.a.a	ENSGT00940000164059	ENSGT00940000153571.b	ENSGT00940000175756	ENSGT00940000159969.b.a.b	ENSGT00510000048137	ENSGT00940000154607.a	ENSGT00390000008846	ENSGT00940000163243	ENSGT00950000182913.A.b.a	ENSGT00940000155248.vb.g.b	ENSGT00390000007225	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000158239.a.b ##22	ENSGT00980000198678	ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a	ENSGT01100000263476.E.b.a.a.b.a.a	ENSGT00940000157308.h	ENSGT00530000063558.A.c.b	ENSGT00390000005581.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00980000198690.a	ENSGT00950000183014.f.a	ENSGT00940000166383	ENSGT00530000063715.b	ENSGT00950000182910.a.a.d	ENSGT00390000003896
Channel bull blenny	MODERN SPECIES	131	prozb (ENSCGOG00000018229)	f10 (ENSCGOG00000018234)	f7i (ENSCGOG00000018274)	f7 (ENSCGOG00000018286)	f7l (ENSCGOG00000018287)	ENSCGOG00000018291	creg1 (ENSCGOG00000018292)	ENSCGOG00000018293	dnajc27 (ENSCGOG00000018296)	ENSCGOG00000015055	mlpha (ENSCGOG00000015059)	ENSCGOG00000015061	ENSCGOG00000015064	dph3 (ENSCGOG00000015067)	cdk15 (ENSCGOG00000015074) #21	FZD7 (ENSCGOG00000015104) #22	ENSCGOG00000015108	abi3bpb (ENSCGOG00000015113)	ftcd (ENSCGOG00000015118)	ENSCGOG00000015147	cd59 (ENSCGOG00000015626)	ENSCGOG00000015628	ebpl (ENSCGOG00000015633)	arl11 (ENSCGOG00000015635)	eef1b2 (ENSCGOG00000015646)	cavin2b (ENSCGOG00000015909)	vps16 (ENSCGOG00000015929)	rgn (ENSCGOG00000016850)	ENSCGOG00000016957	ENSCGOG00000017155
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000158239.b #22
Mangrove rivulus	MODERN SPECIES	112	bmper (ENSKMAG00000017334)	eaf1 (ENSKMAG00000017313)	mettl6 (ENSKMAG00000017283)	ENSKMAG00000017264	sh3bp5b (ENSKMAG00000017214)	capn7 (ENSKMAG00000017123)	ENSKMAG00000017079	ENSKMAG00000017045	mef2d (ENSKMAG00000016918)	rhbg (ENSKMAG00000016699)	hapln2 (ENSKMAG00000016669)	bcan (ENSKMAG00000016637)	ISG20L2 (ENSKMAG00000016622)	mettl25b (ENSKMAG00000016602)	ENSKMAG00000016596	ENSKMAG00000016578 #22	ENSKMAG00000016566	ENSKMAG00000016551	ENSKMAG00000016543	ENSKMAG00000016531	snrnp48 (ENSKMAG00000016514)	zgc:113232 (ENSKMAG00000016494)	ENSKMAG00000016479	ENSKMAG00000016465	wdr73 (ENSKMAG00000016446)	plekhf2 (ENSKMAG00000016431)	ENSKMAG00000016420
Euteleostomi	DUPLICATION
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a ##22
Clupeocephala	ANCESTRAL SPECIES	3	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000178309	ENSGT00940000174369	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00940000156089.e.b	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00940000164964.b	ENSGT00940000157267	ENSGT00510000047718.c	ENSGT00940000156449.b.b	ENSGT00980000199010	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911
Euteleosteomorpha	ANCESTRAL SPECIES	289			ENSGT00940000156160.b.b	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000178309	ENSGT00940000174369	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00940000156089.e.b	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES	279												ENSGT00940000156089.e.b	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a ##22	ENSGT00940000156552.c.a	ENSGT00940000174369	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000156160.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	140												ENSGT00940000156089.e.b	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a ##22	ENSGT00940000156552.c.a	ENSGT00530000063873.B	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000156160.b.b
Percomorphaceae	ANCESTRAL SPECIES	29															ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a ##22	ENSGT00950000183023.A.e	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Tiger tail seahorse	MODERN SPECIES	313	nme9 (ENSHCOG00000017975)	zgc:162707 (ENSHCOG00000017988)	ehhadh (ENSHCOG00000018012)	tmem41aa (ENSHCOG00000018036)	igf2bp2a (ENSHCOG00000018090)	ANKZF1 (ENSHCOG00000018225)	glb1l (ENSHCOG00000018244)	ENSHCOG00000018260	ENSHCOG00000018273	nrp2b (ENSHCOG00000018329)	epb41l5 (ENSHCOG00000018374)	ptpn4a (ENSHCOG00000018430)	tmem177 (ENSHCOG00000018441)	MRAS (ENSHCOG00000018456)	ALS2 (ENSHCOG00000018508) #20	fzd7b (ENSHCOG00000018538) ##22	ENSHCOG00000018620	ENSHCOG00000018634	ENSHCOG00000018646	ENSHCOG00000018666	ENSHCOG00000018675	ENSHCOG00000018719	agpat3 (ENSHCOG00000018746)	pdxka (ENSHCOG00000018782)	CHPF (ENSHCOG00000018799)	asic4a (ENSHCOG00000018829)	ENSHCOG00000018842	ENSHCOG00000018849	gmppaa (ENSHCOG00000018883)	pnkd (ENSHCOG00000018894)	ENSHCOG00000018915
Percomorphaceae_B	DUPLICATION
Percomorphaceae_B	DUPLICATION
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Yellowtail amberjack	MODERN SPECIES	2542									gtf2f2b (ENSSLDG00000022352)	kctd4 (ENSSLDG00000022382)	tsc22d1 (ENSSLDG00000022390)	ENSSLDG00000022398	tpt1 (ENSSLDG00000022402)	ALS2 (ENSSLDG00000022428) #20	ENSSLDG00000022505 #20	ENSSLDG00000022516 ##22	ENSSLDG00000022529	ENSSLDG00000022546	ENSSLDG00000022554	ENSSLDG00000022571	ENSSLDG00000022590	ENSSLDG00000022616	agpat3 (ENSSLDG00000022654)	pdxka (ENSSLDG00000022697)	CHPF (ENSSLDG00000022733)	asic4a (ENSSLDG00000022741)
Pleuronectoidei	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.a ##22
Turbot	MODERN SPECIES	5	ENSSMAG00000007540	ENSSMAG00000007525	ENSSMAG00000007494	ENSSMAG00000007479	ENSSMAG00000007445	ENSSMAG00000007384	ENSSMAG00000007375	ENSSMAG00000007331	kctd4 (ENSSMAG00000007327)	ENSSMAG00000007317	ENSSMAG00000023827	ENSSMAG00000037836	ENSSMAG00000007293	tpt1 (ENSSMAG00000026887)	ENSSMAG00000007166 #20	ENSSMAG00000007144 ##22	ENSSMAG00000028695 ##22	ENSSMAG00000007095	ENSSMAG00000037976	ENSSMAG00000007065	ENSSMAG00000007025	ENSSMAG00000027464	ENSSMAG00000031335	ENSSMAG00000007002	ENSSMAG00000006966	CHPF (ENSSMAG00000033841)	asic4a (ENSSMAG00000006912)	ENSSMAG00000006899	gmppaa (ENSSMAG00000006829)	ENSSMAG00000006812	ENSSMAG00000006792
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Ovalentaria	ANCESTRAL SPECIES	31	ENSGT00730000111696.a	ENSGT00940000156557.g	ENSGT01090000260051.b.b.dc.a	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000157308.h	ENSGT00940000178125	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000158239.a.a.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225
Ovalentaria_B	ANCESTRAL SPECIES	33	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT00990000204585	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.b	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000158239.a.a.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225
Cichlidae	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Midas cichlid	MODERN SPECIES	655														cdk15 (ENSACIG00000008192) #21	fzd7a (ENSACIG00000008250) ##22	ENSACIG00000008259 ##22	ENSACIG00000008267
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Eupecaria_B	ANCESTRAL SPECIES	28	ENSGT00940000166383	ENSGT00950000183014.f.a	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00940000156557.g	ENSGT01090000260051.b.b.dc.a	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000158714.c	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00390000007225	ENSGT00940000164897.a.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.a.b ##22	ENSGT00390000005581.a	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a	ENSGT00940000157308.h	ENSGT01030000235020	ENSGT00940000153737.b.g.a	ENSGT00500000044890.a.a.f	ENSGT00940000156153.y.b	ENSGT00950000183114.a.a	ENSGT00940000157133	ENSGT00390000018208	ENSGT00390000005914.a	ENSGT00940000158209	ENSGT00940000154474.A
Perciformes	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Cottioidei	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Lumpfish	MODERN SPECIES	11	ENSCLMG00005013069	TSPAN7 (ENSCLMG00005013068)	ENSCLMG00005013066	ENSCLMG00005013065	pcid2 (ENSCLMG00005013059)	f10 (ENSCLMG00005013051)	f7i (ENSCLMG00005012966)	f7l (ENSCLMG00005012961)	ENSCLMG00005012948	creg1 (ENSCLMG00005012945)	ENSCLMG00005012943	dnajc27 (ENSCLMG00005012942)	f2 (ENSCLMG00005012301)	fbxo3 (ENSCLMG00005012300)	cdk15 (ENSCLMG00005012298) #21	ENSCLMG00005012296 ##22	FZD7 (ENSCLMG00005012295) ##22	ENSCLMG00005012293	ENSCLMG00005012291	ENSCLMG00005012290	ftcd (ENSCLMG00005012279)	cd59 (ENSCLMG00005012277)	ENSCLMG00005012276	eef1b2 (ENSCLMG00005012274)	ENSCLMG00005012272	arl11 (ENSCLMG00005012270)	ebpl (ENSCLMG00005012249)	ENSCLMG00005012247	ENSCLMG00005012246	vps16 (ENSCLMG00005012176)	rgn (ENSCLMG00005012174)
Percomorphaceae_D	ANCESTRAL SPECIES	27	ENSGT00940000166383	ENSGT00970000193449	ENSGT00950000183014.f.a	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00940000156557.g	ENSGT00940000167421	ENSGT00940000168428.b.a	ENSGT00940000177273	ENSGT00940000168428.b.b.b	ENSGT00940000154067.c	ENSGT01090000260051.b.b.dc.a	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00940000158239.a.a.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT00940000158714.c	ENSGT01100000263502.A.a.a.a.b.a.b
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.a.b ##22
Yellowtail amberjack	MODERN SPECIES	3263	ENSSLDG00000015125	dnajc27 (ENSSLDG00000015143)	ENSSLDG00000015168	ENSSLDG00000015186	XDH (ENSSLDG00000015215)	tspan7b (ENSSLDG00000015287)	mid1ip1b (ENSSLDG00000015327)	ENSSLDG00000015351	ENSSLDG00000015359	bcor (ENSSLDG00000015374)	ENSSLDG00000015406	ENSSLDG00000015450	abi3bpb (ENSSLDG00000015515)	ftcd (ENSSLDG00000015636)	cdk15 (ENSSLDG00000015687) #21	ENSSLDG00000015750 ##22	ENSSLDG00000015765	ENSSLDG00000015776	ENSSLDG00000015789	ST6GAL2 (ENSSLDG00000015802)	trim63a (ENSSLDG00000015821)
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000178293	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00690000101915.i.a	ENSGT00940000164065	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000153518.d.b.a.a	ENSGT00940000178293	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00390000006051	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000164065	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00390000006051	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a	ENSGT00940000159262
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000018088	ENSMAMG00000018046	CLDN14 (ENSMAMG00000027939)	ENSMAMG00000018012	ENSMAMG00000018007	GCC2 (ENSMAMG00000017998)	ENSMAMG00000017963	RANBP2 (ENSMAMG00000017900)	kctd4 (ENSMAMG00000017887)	ENSMAMG00000017867	tsc22d1 (ENSMAMG00000017855)	ENSMAMG00000028596	ENSMAMG00000017841	ENSMAMG00000017820	ENSMAMG00000028644 #20	ENSMAMG00000017802 ##22	ENSMAMG00000026242	ENSMAMG00000027200	ENSMAMG00000028534	ENSMAMG00000026289	ENSMAMG00000027484	ENSMAMG00000026622	ENSMAMG00000027750	ENSMAMG00000017668	ENSMAMG00000025125	ENSMAMG00000027227	ENSMAMG00000017610	ENSMAMG00000027536	ENSMAMG00000024374	ENSMAMG00000017553	ENSMAMG00000017484
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000156485	ENSGT00390000017724.a.a	ENSGT00940000156679	ENSGT00940000174429	ENSGT00940000174998	ENSGT00390000018500.b.b.a	ENSGT00940000155892	ENSGT01030000234575.c.a.a.a.a.a.b.b.b	ENSGT00940000169377.f	ENSGT00940000159463.n.a	ENSGT00950000182844.b.b.a	ENSGT00940000161384	ENSGT00940000157343.a.b	ENSGT00940000159724	ENSGT00530000063745.a	ENSGT00940000158239.a.a.b ##22	ENSGT00940000157759.u.a	ENSGT00940000167628	ENSGT00390000004886	ENSGT00940000167743	ENSGT00510000051337	ENSGT00390000006173	ENSGT00390000015701	ENSGT00940000156408	ENSGT00510000048688	ENSGT01030000234566.e.a	ENSGT00530000063829.A	ENSGT00940000156934.l	ENSGT00730000112261	ENSGT00940000159740	ENSGT00390000017282
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	7	ENSATEG00000020854	EAF1 (ENSATEG00000020825)	METTL6 (ENSATEG00000020794)	ENSATEG00000020781	ENSATEG00000020760	SH3BP5 (ENSATEG00000020736)	CAPN7 (ENSATEG00000020680)	ENSATEG00000020633	ENSATEG00000028643	mef2d (ENSATEG00000020539)	rhbg (ENSATEG00000020457)	hapln2 (ENSATEG00000029058)	bcan (ENSATEG00000020425)	ENSATEG00000020411	mettl25b (ENSATEG00000020394)	ENSATEG00000020385 ##22	ENSATEG00000020378	ENSATEG00000020359	ENSATEG00000020346	ENSATEG00000020338	ENSATEG00000020325	ENSATEG00000020310	ENSATEG00000020264	ENSATEG00000028478	ENSATEG00000027624	ENSATEG00000020210	ENSATEG00000020137	ENSATEG00000020123	ENSATEG00000028869	plekhf2 (ENSATEG00000020094)	NDUFAF6 (ENSATEG00000027941)
Climbing perch	MODERN SPECIES	12	ENSATEG00000001425	ENSATEG00000001469	ENSATEG00000001572	ENSATEG00000001593	ENSATEG00000001641	ENSATEG00000001652	ENSATEG00000001675	ENSATEG00000001716	ENSATEG00000001727	kctd4 (ENSATEG00000001767)	TSC22D1 (ENSATEG00000001776)	TSC22D1 (ENSATEG00000030065)	ENSATEG00000027708	ENSATEG00000001812	ENSATEG00000001825 #20	ENSATEG00000001849 ##22	ENSATEG00000001865	ENSATEG00000029171	ENSATEG00000026211	ENSATEG00000027371	ENSATEG00000028912	ENSATEG00000025358	ENSATEG00000002091	ENSATEG00000027432	ENSATEG00000026073	ENSATEG00000026565	ENSATEG00000027532	ENSATEG00000027586	ENSATEG00000028331	ENSATEG00000026483	ENSATEG00000029854
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	7	atg5 (ENSBSLG00000021955)	dctn3 (ENSBSLG00000021921)	nt5c3a (ENSBSLG00000021886)	BBS9 (ENSBSLG00000021840)	bmper (ENSBSLG00000021286)	eaf1 (ENSBSLG00000021069)	mettl6 (ENSBSLG00000021012)	sh3bp5b (ENSBSLG00000020958)	capn7 (ENSBSLG00000020213)	ENSBSLG00000020209	rhbg (ENSBSLG00000019853)	hapln2 (ENSBSLG00000019778)	bcan (ENSBSLG00000019602)	ISG20L2 (ENSBSLG00000019585)	mettl25b (ENSBSLG00000019575)	ENSBSLG00000019568 ##22	ENSBSLG00000019556	ENSBSLG00000019544	decr1 (ENSBSLG00000019505)	pmvk (ENSBSLG00000019491)	ENSBSLG00000019424	ARHGEF2 (ENSBSLG00000018935)	ENSBSLG00000018876	ANKRD34A (ENSBSLG00000018735)	iqgap3 (ENSBSLG00000018458)	ENSBSLG00000018422	ENSBSLG00000018350	ENSBSLG00000018312	ENSBSLG00000018189	TXNIP (ENSBSLG00000017843)	bnipl (ENSBSLG00000017744)
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000026101	ENSBSLG00000026105	SLC5A7 (ENSBSLG00000026110)	GCC2 (ENSBSLG00000026119)	tmem223 (ENSBSLG00000026128)	ENSBSLG00000026151	RANBP2 (ENSBSLG00000026221)	ENSBSLG00000026237	ENSBSLG00000026239	kctd4 (ENSBSLG00000026240)	tsc22d1 (ENSBSLG00000026241)	zgc:65895 (ENSBSLG00000026242)	ENSBSLG00000026244	tpt1 (ENSBSLG00000026245)	ALS2 (ENSBSLG00000026252) #20	fzd7b (ENSBSLG00000026262) ##22	ENSBSLG00000016817	ENSBSLG00000016844	ENSBSLG00000016848	ENSBSLG00000016857	ENSBSLG00000016865	ENSBSLG00000016873	ENSBSLG00000016885	ENSBSLG00000016904	ENSBSLG00000016912	ENSBSLG00000016921	ENSBSLG00000016944	ENSBSLG00000016953	ENSBSLG00000016961	ENSBSLG00000016976	ENSBSLG00000016992
Carangaria	ANCESTRAL SPECIES	12	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a.p	ENSGT00940000178293	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a.o.a	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00390000006051	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a.p	ENSGT00940000178293	ENSGT00940000154389.a.o.a	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00390000006051	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Turbot	MODERN SPECIES	5	ENSSMAG00000007525	ENSSMAG00000007494	ENSSMAG00000007479	ENSSMAG00000007445	ENSSMAG00000007384	ENSSMAG00000007375	ENSSMAG00000007331	kctd4 (ENSSMAG00000007327)	ENSSMAG00000007317	ENSSMAG00000023827	ENSSMAG00000037836	ENSSMAG00000007293	tpt1 (ENSSMAG00000026887)	ENSSMAG00000007166 #20	ENSSMAG00000007144 ##22	ENSSMAG00000028695 ##22	ENSSMAG00000007095	ENSSMAG00000037976	ENSSMAG00000007065	ENSSMAG00000007025	ENSSMAG00000027464	ENSSMAG00000031335	ENSSMAG00000007002	ENSSMAG00000006966	CHPF (ENSSMAG00000033841)	asic4a (ENSSMAG00000006912)	ENSSMAG00000006899	gmppaa (ENSSMAG00000006829)	ENSSMAG00000006812	ENSSMAG00000006792	dars1 (ENSSMAG00000006714)
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	4	ago1 (ENSCSEG00000001051)	ENSCSEG00000001048	AGO3 (ENSCSEG00000001040)	ENSCSEG00000000817	ENSCSEG00000000794	ENSCSEG00000000790	ENSCSEG00000000784	iglon5 (ENSCSEG00000000778)	ENSCSEG00000000769	USF2 (ENSCSEG00000000763)	etfb (ENSCSEG00000000755)	ENSCSEG00000000749	ISG20L2 (ENSCSEG00000000743)	mettl25b (ENSCSEG00000000735)	ENSCSEG00000000731	ENSCSEG00000000728 ##22	snrnp48 (ENSCSEG00000000722)	ENSCSEG00000000710	ENSCSEG00000000700	ENSCSEG00000000692	ENSCSEG00000000684	NDUFAF6 (ENSCSEG00000000679)	plekhf2 (ENSCSEG00000000674)	nagpa (ENSCSEG00000000667)	bnipl (ENSCSEG00000000661)	prune (ENSCSEG00000000655)	myo1eb (ENSCSEG00000000651)	NPR2 (ENSCSEG00000000622)	dek (ENSCSEG00000000612)	KCNV1 (ENSCSEG00000000608)	gbp (ENSCSEG00000000600)
Tongue sole	MODERN SPECIES	7	ENSCSEG00000013230	RANBP2 (ENSCSEG00000013280)	gtf2f2b (ENSCSEG00000013301)	kctd4 (ENSCSEG00000013325)	tsc22d1 (ENSCSEG00000013330)	zgc:65895 (ENSCSEG00000013332)	SERP2 (ENSCSEG00000013339)	RALB (ENSCSEG00000013345)	nepro (ENSCSEG00000013356)	ENSCSEG00000013366	poglut2 (ENSCSEG00000013373)	stxbp5l (ENSCSEG00000013403)	ENSCSEG00000013630	tpt1 (ENSCSEG00000013637)	ENSCSEG00000013644 #20	fzd7b (ENSCSEG00000013735) ##22	ENSCSEG00000013737	ENSCSEG00000013741	ENSCSEG00000013746	ENSCSEG00000013770	ENSCSEG00000013794	ENSCSEG00000013802	ENSCSEG00000013813	ENSCSEG00000013817	agpat3 (ENSCSEG00000013831)	pdxka (ENSCSEG00000013844)	CHPF (ENSCSEG00000013861)	asic4a (ENSCSEG00000013878)	gmppaa (ENSCSEG00000013921)	ENSCSEG00000013951	pnkd (ENSCSEG00000013958)
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT01050000244948.c.a	ENSGT00940000154490.a.a	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a.o.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00390000006051	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a	ENSGT00940000159262
Barramundi perch	MODERN SPECIES	204														tpt1 (ENSLCAG00010011749)	ALS2 (ENSLCAG00010011744) #20	FZD7 (ENSLCAG00010011736) ##22	ENSLCAG00010011731	ENSLCAG00010011729	ENSLCAG00010011726	ENSLCAG00010011720	ENSLCAG00010011713	agpat3 (ENSLCAG00010011701)	pdxka (ENSLCAG00010011671)	CHPF (ENSLCAG00010011654)	asic4a (ENSLCAG00010011647)	ENSLCAG00010011644	gmppaa (ENSLCAG00010011601)	pnkd (ENSLCAG00010011550)	dars1 (ENSLCAG00010011290)	cxcr4a (ENSLCAG00010011228)	THSD7B (ENSLCAG00010011213)
Seriola	ANCESTRAL SPECIES	34											ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00390000006051	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a.b	ENSGT00950000183023.A.f.a.b.a.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Greater amberjack	MODERN SPECIES	21	EPHA6 (ENSSDUG00000013440)	arl6 (ENSSDUG00000013427)	ENSSDUG00000013412	CLDN14 (ENSSDUG00000013404)	SLC5A7 (ENSSDUG00000013380)	tmem223 (ENSSDUG00000013372)	GCC2 (ENSSDUG00000013338)	LIMS1 (ENSSDUG00000013263)	RANBP2 (ENSSDUG00000013160)	kctd4 (ENSSDUG00000013143)	gtf2f2b (ENSSDUG00000013087)	tsc22d1 (ENSSDUG00000013067)	ENSSDUG00000013051	tpt1 (ENSSDUG00000013034)	ALS2 (ENSSDUG00000012907) #20	fzd7b (ENSSDUG00000012894) ##22	ENSSDUG00000012884	ENSSDUG00000012858	ENSSDUG00000012854	ENSSDUG00000012829	ENSSDUG00000012820	ENSSDUG00000012808	ENSSDUG00000012798	ENSSDUG00000012766	agpat3 (ENSSDUG00000012729)	pdxka (ENSSDUG00000012694)	CHPF (ENSSDUG00000012678)	asic4a (ENSSDUG00000012646)	ENSSDUG00000012634	gmppaa (ENSSDUG00000012554)	pnkd (ENSSDUG00000012538)
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000154490.b	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.y.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Tetraodon	MODERN SPECIES	13	EPHA3 (ENSTNIG00000016418)	STX19 (ENSTNIG00000003996)	ENSTNIG00000002728	ENSTNIG00000003594	arl6 (ENSTNIG00000004395)	SLC5A7 (ENSTNIG00000004394)	GCC2 (ENSTNIG00000019849)	LIMS1 (ENSTNIG00000004437)	RANBP2 (ENSTNIG00000004438)	ENSTNIG00000000318	tpt1 (ENSTNIG00000004439)	GTF2F2 (ENSTNIG00000004440)	tsc22d1 (ENSTNIG00000003779)	SERP2 (ENSTNIG00000019747)	ALS2 (ENSTNIG00000003780) #20	fzd7b (ENSTNIG00000003781) ##22	ENSTNIG00000003782	ENSTNIG00000000480	ENSTNIG00000004008	ENSTNIG00000000335	ENSTNIG00000001245	ENSTNIG00000000688	ENSTNIG00000006121	ENSTNIG00000002973	agpat3 (ENSTNIG00000005619)	pdxka (ENSTNIG00000005620)	CHPF (ENSTNIG00000005621)	asic4a (ENSTNIG00000010994)	gmppaa (ENSTNIG00000010993)	pnkd (ENSTNIG00000010992)	ENSTNIG00000010991
Fugu	MODERN SPECIES		arl6 (ENSTRUG00000003716)	ENSTRUG00000003649	ENSTRUG00000003618	SLC5A7 (ENSTRUG00000003293)	GCC2 (ENSTRUG00000002611)	tmem223 (ENSTRUG00000020983)	ENSTRUG00000002264	RANBP2 (ENSTRUG00000024137)	ENSTRUG00000030582	tpt1 (ENSTRUG00000017997)	ENSTRUG00000024249	kctd4 (ENSTRUG00000018010)	ENSTRUG00000027312	ENSTRUG00000032475	ALS2 (ENSTRUG00000018025) #20	fzd7b (ENSTRUG00000018054) ##22	ENSTRUG00000027840	ENSTRUG00000020946	ENSTRUG00000019867	ENSTRUG00000028712	ENSTRUG00000027013	ENSTRUG00000027817	ENSTRUG00000032249	ENSTRUG00000002940	ENSTRUG00000031198	ENSTRUG00000030048	OR2346-3 (ENSTRUG00000030702)	ENSTRUG00000026963	ENSTRUG00000029345	ENSTRUG00000029028	ENSTRUG00000030567
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Ballan wrasse	MODERN SPECIES	157	CLDN14 (ENSLBEG00000027863)	SLC5A7 (ENSLBEG00000027876)	ENSLBEG00000027889	ENSLBEG00000027903	tmem223 (ENSLBEG00000027912)	LIMS1 (ENSLBEG00000027941)	RANBP2 (ENSLBEG00000027979)	ENSLBEG00000028002	tpt1 (ENSLBEG00000028007)	gtf2f2b (ENSLBEG00000028025)	kctd4 (ENSLBEG00000028038)	tsc22d1 (ENSLBEG00000028045)	zgc:65895 (ENSLBEG00000028055)	SERP2 (ENSLBEG00000000334)	ENSLBEG00000000340 #20	fzd7b (ENSLBEG00000000434) ##22	ENSLBEG00000000464	ENSLBEG00000000497	ENSLBEG00000000560	ENSLBEG00000000607	agpat3 (ENSLBEG00000000684)	pdxka (ENSLBEG00000000742)	CHPF (ENSLBEG00000000783)	asic4a (ENSLBEG00000000829)	cxcr4a (ENSLBEG00000000869)	dars1 (ENSLBEG00000000879)	ENSLBEG00000000971	pnkd (ENSLBEG00000000985)	gmppaa (ENSLBEG00000001003)	ENSLBEG00000001033	arhgap15 (ENSLBEG00000001058)
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Gilthead seabream	MODERN SPECIES	23	arl6 (ENSSAUG00010019340)	ENSSAUG00010019338	CLDN14 (ENSSAUG00010019337)	SLC5A7 (ENSSAUG00010019334)	tmem223 (ENSSAUG00010019333)	GCC2 (ENSSAUG00010019327)	ENSSAUG00010019321	RANBP2 (ENSSAUG00010017044)	tpt1 (ENSSAUG00010016986)	kctd4 (ENSSAUG00010016985)	gtf2f2b (ENSSAUG00010016982)	tsc22d1 (ENSSAUG00010016978)	ENSSAUG00010016974	SERP2 (ENSSAUG00010016971)	ALS2 (ENSSAUG00010016679) #20	FZD7 (ENSSAUG00010016676) ##22	ENSSAUG00010016672	edar (ENSSAUG00010016667)	SH3RF3 (ENSSAUG00010016663)	septin10 (ENSSAUG00010015128)	SOWAHC (ENSSAUG00010015113)	akap17a (ENSSAUG00010015110)	asmt (ENSSAUG00010015107)	ENSSAUG00010015105	znf148 (ENSSAUG00010015104)	slc12a8 (ENSSAUG00010015099)	heg1 (ENSSAUG00010015096)	ENSSAUG00010015092	ENSSAUG00010015091	ENSSAUG00010015086	ENSSAUG00010015084
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000153518.d.b.b.w.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Large yellow croaker	MODERN SPECIES	490	arl6 (ENSLCRG00005013456)	ENSLCRG00005013453	CLDN14 (ENSLCRG00005013451)	SLC5A7 (ENSLCRG00005013448)	tmem223 (ENSLCRG00005013446)	GCC2 (ENSLCRG00005013409)	LIMS1 (ENSLCRG00005012870)	RANBP2 (ENSLCRG00005012708)	tpt1 (ENSLCRG00005012706)	kctd4 (ENSLCRG00005012705)	gtf2f2b (ENSLCRG00005012702)	tsc22d1 (ENSLCRG00005012701)	zgc:65895 (ENSLCRG00005012700)	SERP2 (ENSLCRG00005012697)	ALS2 (ENSLCRG00005012299) #20	fzd7b (ENSLCRG00005012294) ##22	ENSLCRG00005012292	ENSLCRG00005012290	ENSLCRG00005012283	ENSLCRG00005012282	ENSLCRG00005012280	ENSLCRG00005012278	ENSLCRG00005012277	ENSLCRG00005012276	ENSLCRG00005012274	ENSLCRG00005012272	ENSLCRG00005012264	ENSLCRG00005012262	ENSLCRG00005012261	ENSLCRG00005012260	ENSLCRG00005012259
European seabass	MODERN SPECIES	5	ENSDLAG00005000773	ENSDLAG00005000770	ENSDLAG00005000767	ENSDLAG00005026419	GCC2 (ENSDLAG00005000740)	ENSDLAG00005000736	ENSDLAG00005000659	RANBP2 (ENSDLAG00005000387)	TPT1 (ENSDLAG00005000354)	kctd4 (ENSDLAG00005031353)	gtf2f2b (ENSDLAG00005030100)	tsc22d1 (ENSDLAG00005030955)	ENSDLAG00005031930	ENSDLAG00005030599	ENSDLAG00005000310 #20	ENSDLAG00005032071 ##22	ENSDLAG00005021904	ENSDLAG00005005716	ENSDLAG00005003525	ENSDLAG00005032391	ENSDLAG00005030806	ENSDLAG00005002629	ENSDLAG00005034493	ENSDLAG00005010357	ENSDLAG00005002446	ENSDLAG00005000293	ENSDLAG00005000290	ENSDLAG00005028228	ENSDLAG00005031702	ENSDLAG00005000284	ENSDLAG00005000287
Perciformes	ANCESTRAL SPECIES	23	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.b.w.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Lumpfish	MODERN SPECIES	13	ENSCLMG00005009123	ARL6 (ENSCLMG00005009125)	ENSCLMG00005009127	CLDN14 (ENSCLMG00005009128)	SLC5A7 (ENSCLMG00005009129)	GCC2 (ENSCLMG00005009130)	tmem223 (ENSCLMG00005009131)	LIMS1 (ENSCLMG00005009132)	RANBP2 (ENSCLMG00005009168)	tpt1 (ENSCLMG00005013027)	ENSCLMG00005013029	kctd4 (ENSCLMG00005013034)	ENSCLMG00005013035	SERP2 (ENSCLMG00005013036)	ALS2 (ENSCLMG00005013043) #20	fzd7b (ENSCLMG00005013313) ##22	ENSCLMG00005013314	ENSCLMG00005013315	ENSCLMG00005013317	ENSCLMG00005013318	ENSCLMG00005013319	ENSCLMG00005013322	ENSCLMG00005013324	agpat3 (ENSCLMG00005013326)	pdxka (ENSCLMG00005013331)	CHPF (ENSCLMG00005013343)	asic4a (ENSCLMG00005013344)	gmppaa (ENSCLMG00005013345)	ENSCLMG00005013358	pnkd (ENSCLMG00005013359)	TMBIM1 (ENSCLMG00005013360)
Stickleback	MODERN SPECIES	16	EPHA6 (ENSGACG00000006770)	arl6 (ENSGACG00000006779)	ENSGACG00000006797	CLDN14 (ENSGACG00000006803)	SLC5A7 (ENSGACG00000006805)	GCC2 (ENSGACG00000006813)	tmem223 (ENSGACG00000006823)	LIMS1 (ENSGACG00000006826)	RANBP2 (ENSGACG00000006831)	tpt1 (ENSGACG00000006855)	GTF2F2 (ENSGACG00000006880)	kctd4 (ENSGACG00000006886)	tsc22d1 (ENSGACG00000006889)	SERP2 (ENSGACG00000006904)	ALS2 (ENSGACG00000006911) #20	fzd7b (ENSGACG00000006935) ##22	ENSGACG00000006937	ENSGACG00000006941	ENSGACG00000006943	ENSGACG00000006947	ENSGACG00000006948	ENSGACG00000006952	ENSGACG00000006957	ENSGACG00000006961	ENSGACG00000006963	ENSGACG00000006966	ENSGACG00000006969	ENSGACG00000006971	ENSGACG00000006973	ENSGACG00000006974	ENSGACG00000006976
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00940000154490.a.a	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Pike perch	MODERN SPECIES	57	STX19 (ENSSLUG00000024873)	EPHA6 (ENSSLUG00000024874)	arl6 (ENSSLUG00000024900)	ENSSLUG00000024910	CLDN14 (ENSSLUG00000024914)	SLC5A7 (ENSSLUG00000024917)	GCC2 (ENSSLUG00000024921)	tmem223 (ENSSLUG00000024924)	ENSSLUG00000024932	RANBP2 (ENSSLUG00000025010)	tpt1 (ENSSLUG00000025273)	ENSSLUG00000025275	kctd4 (ENSSLUG00000025279)	ENSSLUG00000025281	ENSSLUG00000025285	fzd7b (ENSSLUG00000025301) ##22	ENSSLUG00000025303	ENSSLUG00000025304	ENSSLUG00000025305	agpat3 (ENSSLUG00000025308)	pdxka (ENSSLUG00000025317)	CHPF (ENSSLUG00000025325)	asic4a (ENSSLUG00000025338)	gmppaa (ENSSLUG00000025367)	ENSSLUG00000025377	pnkd (ENSSLUG00000025381)	TMBIM1 (ENSSLUG00000001466)	dars1 (ENSSLUG00000001741)	cxcr4a (ENSSLUG00000002135)	ENSSLUG00000002139	THSD7B (ENSSLUG00000002165)
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	7	mettl6 (ENSCGOG00000002336)	ENSCGOG00000002333	ENSCGOG00000002330	ENSCGOG00000002328	ENSCGOG00000002326	sh3bp5b (ENSCGOG00000002324)	capn7 (ENSCGOG00000002030)	ENSCGOG00000002016	mef2d (ENSCGOG00000001991)	ENSCGOG00000001988	rhbg (ENSCGOG00000001766)	hapln2 (ENSCGOG00000001743)	ENSCGOG00000001739	mettl25b (ENSCGOG00000001735)	ENSCGOG00000001728	ENSCGOG00000001724 ##22	ENSCGOG00000001713	ENSCGOG00000001669	snrnp48 (ENSCGOG00000001658)	ENSCGOG00000001653	ENSCGOG00000001650	CFAP418 (ENSCGOG00000001647)	ENSCGOG00000001641	wdr73 (ENSCGOG00000001623)	plekhf2 (ENSCGOG00000001614)	ENSCGOG00000001608	ENSCGOG00000001593	NDUFAF6 (ENSCGOG00000015928)	ENSCGOG00000015926	ENSCGOG00000015925	nagpa (ENSCGOG00000015920)
Channel bull blenny	MODERN SPECIES	13	EPHA6 (ENSCGOG00000009049)	arl6 (ENSCGOG00000009029)	ENSCGOG00000009025	CLDN14 (ENSCGOG00000009022)	SLC5A7 (ENSCGOG00000009014)	tmem223 (ENSCGOG00000009012)	GCC2 (ENSCGOG00000009008)	ENSCGOG00000008875	RANBP2 (ENSCGOG00000008649)	tpt1 (ENSCGOG00000008641)	kctd4 (ENSCGOG00000008640)	gtf2f2b (ENSCGOG00000008637)	ENSCGOG00000008635	SERP2 (ENSCGOG00000008626)	ALS2 (ENSCGOG00000008155) #20	fzd7b (ENSCGOG00000008130) ##22	ENSCGOG00000008116	ENSCGOG00000008111	ENSCGOG00000008109	ENSCGOG00000008098	ENSCGOG00000008094	ENSCGOG00000008089	ENSCGOG00000008087	agpat3 (ENSCGOG00000007961)	pdxka (ENSCGOG00000007930)	CHPF (ENSCGOG00000007924)	asic4a (ENSCGOG00000007921)	ENSCGOG00000007919	gmppaa (ENSCGOG00000007399)	pnkd (ENSCGOG00000007384)	ENSCGOG00000007381
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Midas cichlid	MODERN SPECIES	399	arl6 (ENSACIG00000000945)	ENSACIG00000000963	CLDN14 (ENSACIG00000001020)	SLC5A7 (ENSACIG00000001046)	GCC2 (ENSACIG00000001072)	tmem223 (ENSACIG00000001134)	ENSACIG00000001167	RANBP2 (ENSACIG00000001203)	tpt1 (ENSACIG00000001458)	gtf2f2b (ENSACIG00000001476)	kctd4 (ENSACIG00000001498)	tsc22d1 (ENSACIG00000001505)	zgc:65895 (ENSACIG00000001518)	SERP2 (ENSACIG00000001560)	ENSACIG00000001677 #20	fzd7b (ENSACIG00000001759) ##22	ENSACIG00000001799
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.a.b	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00950000183023.A.e.a	ENSGT00950000183048.b.b.b.c.a.a.b.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00940000162556.A.b	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052
Burton s mouthbrooder	MODERN SPECIES	558	arl6 (ENSHBUG00000002834)	ENSHBUG00000002842	CLDN14 (ENSHBUG00000002799)	SLC5A7 (ENSHBUG00000002791)	ENSHBUG00000002767	tmem223 (ENSHBUG00000002760)	ENSHBUG00000002751	RANBP2 (ENSHBUG00000000053)	tpt1 (ENSHBUG00000002705)	gtf2f2b (ENSHBUG00000002700)	kctd4 (ENSHBUG00000002683)	tsc22d1 (ENSHBUG00000002680)	ENSHBUG00000002675	SERP2 (ENSHBUG00000000046)	ALS2 (ENSHBUG00000002655) #20	fzd7b (ENSHBUG00000002625) ##22	ENSHBUG00000002620	ENSHBUG00000002611	ENSHBUG00000002598
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT01030000235834	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00950000183048.b.b.b.c.a.a.a.a.a	ENSGT00950000183048.b.b.b.c.a.a.a.a.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.a.a.e.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b	ENSGT00950000183023.A.f.a.a.a.f.a.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.a.b	ENSGT00950000182836.b.b.b.a
P. nyererei	MODERN SPECIES	501	arl6 (ENSPNYG00000016273)	ENSPNYG00000016219	CLDN14 (ENSPNYG00000016186)	SLC5A7 (ENSPNYG00000016162)	tmem223 (ENSPNYG00000016145)	GCC2 (ENSPNYG00000016102)	ENSPNYG00000016087	ENSPNYG00000016043	RANBP2 (ENSPNYG00000015971)	tpt1 (ENSPNYG00000015940)	gtf2f2b (ENSPNYG00000015925)	kctd4 (ENSPNYG00000015915)	tsc22d1 (ENSPNYG00000015900)	SERP2 (ENSPNYG00000015883)	ENSPNYG00000015814 #20	fzd7b (ENSPNYG00000015800) ##22	ENSPNYG00000015785	ENSPNYG00000015757	ENSPNYG00000015738	ENSPNYG00000015722	ENSPNYG00000015703	ENSPNYG00000015693	ENSPNYG00000015662	ENSPNYG00000015646	ENSPNYG00000015620	ENSPNYG00000015598
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT01030000235834	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b.c.a.b.b	ENSGT00950000183048.b.b.b.c.b.a.a.b.c	ENSGT00950000183048.b.b.b.c.a.a.b.a	ENSGT00950000183048.b.b.b.c.a.a.a.a.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.e.b	ENSGT00950000183023.A.f.a.a.a.f.b.b	ENSGT00950000183023.A.f.a.a.a.f.a.b	ENSGT00950000183023.A.f.a.a.a.f.b.a	ENSGT00950000183023.A.f.a.b.a.a.a.p.b.b.c.b.b
Eastern happy	MODERN SPECIES	7	CLDN14 (ENSACLG00000020282)	SLC5A7 (ENSACLG00000020298)	GCC2 (ENSACLG00000020322)	tmem223 (ENSACLG00000020378)	lims1 (ENSACLG00000020405)	ENSACLG00000020484	RANBP2 (ENSACLG00000020500)	tpt1 (ENSACLG00000020580)	gtf2f2b (ENSACLG00000020594)	kctd4 (ENSACLG00000020628)	tsc22d1 (ENSACLG00000020634)	ENSACLG00000020641	SERP2 (ENSACLG00000020650)	ENSACLG00000020676	ENSACLG00000020681 #20	fzd7b (ENSACLG00000020689) ##22	ENSACLG00000020701	ENSACLG00000020716	ENSACLG00000020728	ENSACLG00000020739	ENSACLG00000020752	ENSACLG00000020756	ENSACLG00000020766	ENSACLG00000020777	ENSACLG00000020785	ENSACLG00000020796	ENSACLG00000020802	ENSACLG00000020811	ENSACLG00000020821	ENSACLG00000020828	ENSACLG00000020859
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005010778	CLDN14 (ENSMZEG00005010785)	SLC5A7 (ENSMZEG00005010791)	ENSMZEG00005010809	tmem223 (ENSMZEG00005010851)	ENSMZEG00005010880	ENSMZEG00005010940	RANBP2 (ENSMZEG00005010956)	tpt1 (ENSMZEG00005010996)	gtf2f2b (ENSMZEG00005011007)	kctd4 (ENSMZEG00005011017)	tsc22d1 (ENSMZEG00005011022)	ENSMZEG00005011030	SERP2 (ENSMZEG00005011044)	ALS2 (ENSMZEG00005011151) #20	fzd7b (ENSMZEG00005012012) ##22	ENSMZEG00005012017	ENSMZEG00005012031	ENSMZEG00005012036	ENSMZEG00005012048	ENSMZEG00005012052	ENSMZEG00005012053	ENSMZEG00005012059	ENSMZEG00005012067	ENSMZEG00005012077	ENSMZEG00005012091	ENSMZEG00005012099	ENSMZEG00005012108	ENSMZEG00005012119	ENSMZEG00005012128	ENSMZEG00005012132
Lyretail cichlid	MODERN SPECIES	380	EPHA6 (ENSNBRG00000003486)	arl6 (ENSNBRG00000004364)	ENSNBRG00000004391	CLDN14 (ENSNBRG00000004421)	SLC5A7 (ENSNBRG00000004434)	GCC2 (ENSNBRG00000004481)	tmem223 (ENSNBRG00000004529)	ENSNBRG00000004549	RANBP2 (ENSNBRG00000004587)	tpt1 (ENSNBRG00000004611)	gtf2f2b (ENSNBRG00000004659)	kctd4 (ENSNBRG00000004910)	tsc22d1 (ENSNBRG00000004926)	ENSNBRG00000004955	ENSNBRG00000004970 #20	fzd7b (ENSNBRG00000005043) ##22	ENSNBRG00000005051	ENSNBRG00000005066	ENSNBRG00000005080	ENSNBRG00000005094	ENSNBRG00000005129	ENSNBRG00000005165	ENSNBRG00000005188	ENSNBRG00000005215
Nile tilapia	MODERN SPECIES	7	fbxo47 (ENSONIG00000004325)	CLDN14 (ENSONIG00000035598)	SLC5A7 (ENSONIG00000032833)	tmem223 (ENSONIG00000042715)	GCC2 (ENSONIG00000004335)	ENSONIG00000036841	ENSONIG00000004345	RANBP2 (ENSONIG00000004346)	tpt1 (ENSONIG00000040164)	kctd4 (ENSONIG00000004355)	gtf2f2b (ENSONIG00000004353)	tsc22d1 (ENSONIG00000004357)	ENSONIG00000030650	SERP2 (ENSONIG00000028541)	ALS2 (ENSONIG00000004358) #20	fzd7b (ENSONIG00000021335) ##22	ENSONIG00000033122	ENSONIG00000036194	ENSONIG00000036914	ENSONIG00000029654	ENSONIG00000039892	ENSONIG00000040310	ENSONIG00000028876	ENSONIG00000029801	ENSONIG00000032400	ENSONIG00000033310	ENSONIG00000034853	ENSONIG00000031112	ENSONIG00000031624	ENSONIG00000030800	ENSONIG00000029404
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Bicolor damselfish	MODERN SPECIES	327					tmem223 (ENSSPAG00000008217)	ENSSPAG00000008200	ENSSPAG00000008102	RANBP2 (ENSSPAG00000008000)	tpt1 (ENSSPAG00000007967)	kctd4 (ENSSPAG00000007959)	gtf2f2b (ENSSPAG00000007713)	tsc22d1 (ENSSPAG00000007688)	ENSSPAG00000007686	SERP2 (ENSSPAG00000007674)	ENSSPAG00000007653 #20	fzd7b (ENSSPAG00000007646) ##22	ENSSPAG00000007642	ENSSPAG00000007614	ENSSPAG00000007590	ENSSPAG00000007558	ENSSPAG00000007514	ENSSPAG00000007496	agpat3 (ENSSPAG00000007464)	pdxka (ENSSPAG00000007386)	CHPF (ENSSPAG00000007363)	asic4a (ENSSPAG00000007214)	ENSSPAG00000007186	gmppaa (ENSSPAG00000007113)	pnkd (ENSSPAG00000007083)	TMBIM1 (ENSSPAG00000007061)	dars1 (ENSSPAG00000007022)
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT01030000236979	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183048.b.b.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00940000159552	ENSGT00390000016051.b	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a.lb	ENSGT01030000234640.a.a.c.a.kb	ENSGT00950000183023.A.f.a.a.a.h.b	ENSGT00950000183023.A.f.a.a.a.g	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT01030000234748	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b
Clown anemonefish	MODERN SPECIES	2588															ALS2 (ENSAOCG00000001990) #20	fzd7b (ENSAOCG00000009925) ##22	ENSAOCG00000009909	ENSAOCG00000009869	ENSAOCG00000000605	ENSAOCG00000009798	ENSAOCG00000009783
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000012774	CLDN14 (ENSAPEG00000012754)	SLC5A7 (ENSAPEG00000012734)	ENSAPEG00000012715	tmem223 (ENSAPEG00000012694)	ENSAPEG00000012659	ENSAPEG00000012646	ENSAPEG00000012573	RANBP2 (ENSAPEG00000012495)	tpt1 (ENSAPEG00000012472)	kctd4 (ENSAPEG00000012458)	gtf2f2b (ENSAPEG00000012444)	tsc22d1 (ENSAPEG00000012423)	SERP2 (ENSAPEG00000012407)	ALS2 (ENSAPEG00000012283) #20	fzd7b (ENSAPEG00000012268) ##22	ENSAPEG00000012219	ENSAPEG00000012190	ENSAPEG00000012181	ENSAPEG00000012161	ENSAPEG00000012126	ENSAPEG00000012110	ENSAPEG00000012079	ENSAPEG00000012020	ENSAPEG00000012003	agpat3 (ENSAPEG00000011978)	pdxka (ENSAPEG00000011906)	CHPF (ENSAPEG00000011882)	asic4a (ENSAPEG00000011839)	ENSAPEG00000011810	ENSAPEG00000011797
Spiny chromis	MODERN SPECIES	1569																fzd7b (ENSAPOG00000006603) ##22	ENSAPOG00000006583	ENSAPOG00000006570	ENSAPOG00000006534	ENSAPOG00000006502	agpat3 (ENSAPOG00000006485)	pdxka (ENSAPOG00000006426)	CHPF (ENSAPOG00000006377)	asic4b (ENSAPOG00000006339)
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Oryzias	ANCESTRAL SPECIES	10	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT00940000155466.e.b	ENSGT00940000154014.b.b	ENSGT00390000005550	ENSGT00390000005581.b	ENSGT00530000063607.b.j.a	ENSGT01030000234565.a.b	ENSGT00390000002215.i.a	ENSGT00910000148192	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00390000017045	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000182051	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT00940000155466.e.b	ENSGT00940000154014.b.b	ENSGT00390000005550	ENSGT00390000005581.b	ENSGT00530000063607.b.j.a	ENSGT01030000234565.a.b	ENSGT00390000002215.i.a	ENSGT00910000148192	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00390000017045	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587
Indian medaka	MODERN SPECIES	18	arl6 (ENSOMEG00000023152)	ENSOMEG00000023140	CLDN14 (ENSOMEG00000023116)	SLC5A7 (ENSOMEG00000023109)	ENSOMEG00000023094	tmem223 (ENSOMEG00000023070)	ENSOMEG00000023051	ENSOMEG00000023002	RANBP2 (ENSOMEG00000022969)	tpt1 (ENSOMEG00000022911)	gtf2f2b (ENSOMEG00000022887)	kctd4 (ENSOMEG00000022865)	tsc22d1 (ENSOMEG00000022846)	SERP2 (ENSOMEG00000022833)	ENSOMEG00000022822 #20	fzd7b (ENSOMEG00000022806) ##22	ENSOMEG00000022798	ENSOMEG00000022778	HECW2 (ENSOMEG00000022762)	stk17b (ENSOMEG00000022716)	zgc:153521 (ENSOMEG00000022708)	ftcdnl1 (ENSOMEG00000022700)	ENSOMEG00000022679	LYPD1 (ENSOMEG00000022612)	gpr39 (ENSOMEG00000022590)	SLC35F5 (ENSOMEG00000022602)	ENSOMEG00000022582	SYMPK (ENSOMEG00000022561)	zgc:136439 (ENSOMEG00000022524)	asnsd1 (ENSOMEG00000000595)	ENSOMEG00000022500
Javanese ricefish	MODERN SPECIES	13	EPHA6 (ENSOJAG00000006081)	arl6 (ENSOJAG00000007172)	ENSOJAG00000007191	CLDN14 (ENSOJAG00000007202)	SLC5A7 (ENSOJAG00000007213)	ENSOJAG00000007246	tmem223 (ENSOJAG00000007271)	ENSOJAG00000007335	ENSOJAG00000007534	RANBP2 (ENSOJAG00000007583)	tpt1 (ENSOJAG00000008002)	gtf2f2b (ENSOJAG00000008025)	kctd4 (ENSOJAG00000008058)	tsc22d1 (ENSOJAG00000008069)	SERP2 (ENSOJAG00000008099)	fzd7b (ENSOJAG00000008598) ##22	ENSOJAG00000008649	ENSOJAG00000008697	ENSOJAG00000008733	ENSOJAG00000008741	ENSOJAG00000008749	LACC1 (ENSOJAG00000008762)	ENSOJAG00000009152	ENSOJAG00000009191	ENSOJAG00000009288	ENSOJAG00000009297	ENSOJAG00000009312	si:dkey-69o16.5 (ENSOJAG00000009325)	itgav (ENSOJAG00000009577)	med4 (ENSOJAG00000012533)	SUCLA2 (ENSOJAG00000012571)
Oryzias_a	ANCESTRAL SPECIES	45	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00390000012589	ENSGT00950000183078.a	ENSGT00940000153518.d.b.a.a	ENSGT00940000178293	ENSGT00940000154389.a	ENSGT00390000006051.y	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.a	ENSGT00940000155466.e.b	ENSGT00940000154014.b.b	ENSGT00390000005550	ENSGT00390000005581.b	ENSGT00530000063607.b.j.a	ENSGT00390000002215.i.a	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00390000017045	ENSGT00390000007295	ENSGT00390000012446	ENSGT01020000230587	ENSGT00390000015143	ENSGT00390000006303
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000015588	ENSORLG00000015571	ENSORLG00000027964	ENSORLG00000015563	tmem223 (ENSORLG00000026765)	ENSORLG00000015551	ENSORLG00000015535	ENSORLG00000024636	RANBP2 (ENSORLG00000015523)	tpt1 (ENSORLG00000015494)	kctd4 (ENSORLG00000015490)	GTF2F2 (ENSORLG00000015486)	tsc22d1 (ENSORLG00000024185)	SERP2 (ENSORLG00000026720)	ENSORLG00000015458 #20	fzd7b (ENSORLG00000015430) ##22	ENSORLG00000015427	ENSORLG00000015420	stk17b (ENSORLG00000015401)	zgc:153521 (ENSORLG00000015386)	ENSORLG00000023395	ftcdnl1 (ENSORLG00000015376)	ENSORLG00000021805	LYPD1 (ENSORLG00000027780)	gpr39 (ENSORLG00000028565)	SLC35F5 (ENSORLG00000015361)	SYMPK (ENSORLG00000015338)	zgc:136439 (ENSORLG00000015293)	asnsd1 (ENSORLG00000015281)	ENSORLG00000023515	slc40a1 (ENSORLG00000015266)
Chinese medaka	MODERN SPECIES	703	arl6 (ENSOSIG00000007257)	ENSOSIG00000007255	CLDN14 (ENSOSIG00000007253)	SLC5A7 (ENSOSIG00000007252)	tmem223 (ENSOSIG00000007251)	ENSOSIG00000007248	ENSOSIG00000006487	ENSOSIG00000006473	RANBP2 (ENSOSIG00000005523)	tpt1 (ENSOSIG00000005521)	kctd4 (ENSOSIG00000005520)	gtf2f2b (ENSOSIG00000005519)	tsc22d1 (ENSOSIG00000005518)	SERP2 (ENSOSIG00000005516)	ALS2 (ENSOSIG00000005507) #20	fzd7b (ENSOSIG00000005504) ##22	or62c1 (ENSOSIG00000005503)	HECW2 (ENSOSIG00000000849)	stk17b (ENSOSIG00000000738)	zgc:153521 (ENSOSIG00000000733)	ftcdnl1 (ENSOSIG00000000727)	ENSOSIG00000000716	gpr39 (ENSOSIG00000000715)	zgc:136439 (ENSOSIG00000000711)	asnsd1 (ENSOSIG00000016513)	ENSOSIG00000016512	slc40a1 (ENSOSIG00000016508)	wdr75 (ENSOSIG00000016489)	STAT4 (ENSOSIG00000016441)	ENSOSIG00000016413	GLS (ENSOSIG00000012852)
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00940000168128	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00940000162556.A.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Mangrove rivulus	MODERN SPECIES	74	arl6 (ENSKMAG00000000815)	ENSKMAG00000000860	CLDN14 (ENSKMAG00000000905)	SLC5A7 (ENSKMAG00000000920)	ENSKMAG00000000966	ENSKMAG00000001011	tmem223 (ENSKMAG00000001055)	ENSKMAG00000001080	RANBP2 (ENSKMAG00000001158)	tpt1 (ENSKMAG00000001185)	ENSKMAG00000001196	kctd4 (ENSKMAG00000001225)	tsc22d1 (ENSKMAG00000001234)	SERP2 (ENSKMAG00000001257)	ENSKMAG00000001285 #20	fzd7b (ENSKMAG00000001382) ##22	ENSKMAG00000001400	ENSKMAG00000001404
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015005659	DHRSX (ENSNFUG00015005653)	ENSNFUG00015005649	asmt (ENSNFUG00015005631)	GULP1 (ENSNFUG00015005561)	COL5A2 (ENSNFUG00015005052)	ENSNFUG00015005006	ENSNFUG00015005002	ENSNFUG00015004998	gtf2f2b (ENSNFUG00015004982)	KCTD4 (ENSNFUG00015004978)	tsc22d1 (ENSNFUG00015004972)	zgc:65895 (ENSNFUG00015004966)	SERP2 (ENSNFUG00015004953)	ALS2 (ENSNFUG00015004847) #20	fzd7b (ENSNFUG00015004789) ##22	ENSNFUG00015004783	ENSNFUG00015023961	ENSNFUG00015023958	ENSNFUG00015023955	ENSNFUG00015023953	ENSNFUG00015023952	ENSNFUG00015023950	AGPAT3 (ENSNFUG00015023944)	pdxka (ENSNFUG00015023923)	CHPFA (ENSNFUG00015023919)	ASIC4 (ENSNFUG00015023901)	ENSNFUG00015023890	ENSNFUG00015023886	ENSNFUG00015023884	ENSNFUG00015023882
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Poeciliinae	ANCESTRAL SPECIES	25	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.i.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
Poecilia	ANCESTRAL SPECIES	13	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.i.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT01030000234748	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a
NAME_6	ANCESTRAL SPECIES	80	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000159144.A.e.b	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a.i.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052	ENSGT00940000157018	ENSGT00940000158887	ENSGT01050000244890.a.b.a.i.b	ENSGT01030000234618.F	ENSGT01050000244848.C.a	ENSGT00940000159262
Amazon molly	MODERN SPECIES	335	ENSPFOG00000006578	CLDN14 (ENSPFOG00000006712)	SLC5A7 (ENSPFOG00000006737)	SLC5A7 (ENSPFOG00000006835)	GCC2 (ENSPFOG00000006910)	tmem223 (ENSPFOG00000020189)	ENSPFOG00000007252	RANBP2 (ENSPFOG00000007377)	tpt1 (ENSPFOG00000007677)	ENSPFOG00000007771	kctd4 (ENSPFOG00000020190)	kctd4 (ENSPFOG00000020191)	zgc:65895 (ENSPFOG00000007803)	SERP2 (ENSPFOG00000007861)	ENSPFOG00000007870 #20	fzd7b (ENSPFOG00000020192) ##22	ENSPFOG00000020193	ENSPFOG00000021955	or64d1 (ENSPFOG00000022223)	ENSPFOG00000008045	ENSPFOG00000020194	agpat3 (ENSPFOG00000008059)	pdxka (ENSPFOG00000008244)	CHPF (ENSPFOG00000008350)
Sailfin molly	MODERN SPECIES	389									RANBP2 (ENSPLAG00000012373)	tpt1 (ENSPLAG00000012361)	gtf2f2b (ENSPLAG00000012356)	kctd4 (ENSPLAG00000012351)	tsc22d1 (ENSPLAG00000012340)	SERP2 (ENSPLAG00000012337)	ALS2 (ENSPLAG00000012315) #20	fzd7b (ENSPLAG00000012273) ##22	ENSPLAG00000012264	ENSPLAG00000012252	ENSPLAG00000012248	ENSPLAG00000012228	ENSPLAG00000012204	agpat3 (ENSPLAG00000012197)	pdxka (ENSPLAG00000012167)	CHPF (ENSPLAG00000012132)
Guppy	MODERN SPECIES	450	arl6 (ENSPREG00000013042)	ENSPREG00000013074	ENSPREG00000013088	SLC5A7 (ENSPREG00000013103)	GCC2 (ENSPREG00000013142)	tmem223 (ENSPREG00000013214)	ENSPREG00000013239	RANBP2 (ENSPREG00000013331)	tpt1 (ENSPREG00000013599)	gtf2f2b (ENSPREG00000013804)	kctd4 (ENSPREG00000013980)	ENSPREG00000013982	tsc22d1 (ENSPREG00000013988)	zgc:65895 (ENSPREG00000013994)	ALS2 (ENSPREG00000014013) #20	fzd7b (ENSPREG00000014079) ##22	ENSPREG00000014087	ENSPREG00000014109	or64d1 (ENSPREG00000014132)	ENSPREG00000014140	ENSPREG00000014153	agpat3 (ENSPREG00000014169)	pdxka (ENSPREG00000014190)	CHPF (ENSPREG00000014235)	ENSPREG00000014242	asic4a (ENSPREG00000014248)	gmppaa (ENSPREG00000014364)	ENSPREG00000014419	pnkd (ENSPREG00000014434)	TMBIM1 (ENSPREG00000014447)	dars1 (ENSPREG00000014466)
Platyfish	MODERN SPECIES	21	EPHA6 (ENSXMAG00000023223)	arl6 (ENSXMAG00000003438)	ENSXMAG00000003455	ENSXMAG00000024329	SLC5A7 (ENSXMAG00000003469)	ENSXMAG00000003483	tmem223 (ENSXMAG00000003506)	ENSXMAG00000023681	RANBP2 (ENSXMAG00000003519)	tpt1 (ENSXMAG00000028654)	gtf2f2b (ENSXMAG00000003551)	kctd4 (ENSXMAG00000020389)	tsc22d1 (ENSXMAG00000003554)	ENSXMAG00000003558	ALS2 (ENSXMAG00000003567) #20	fzd7b (ENSXMAG00000020390) ##22	ENSXMAG00000020391	ENSXMAG00000024839	or64d1 (ENSXMAG00000019623)	ENSXMAG00000027179	ENSXMAG00000003594	ENSXMAG00000020392	agpat3 (ENSXMAG00000003600)	PDXK (ENSXMAG00000003609)	CHPF (ENSXMAG00000003616)	asic4a (ENSXMAG00000003624)	gmppaa (ENSXMAG00000003625)	ENSXMAG00000023182	TMBIM1 (ENSXMAG00000024690)	dars1 (ENSXMAG00000003657)	cxcr4a (ENSXMAG00000003684)
NAME_4	ANCESTRAL SPECIES	131	ENSGT00940000156459.l	ENSGT00940000167237	ENSGT00940000161312	ENSGT00690000101915.i.a	ENSGT00950000183078.a	ENSGT00390000012589	ENSGT00940000153518.d.b.a.a	ENSGT00940000154389.a	ENSGT00940000178293	ENSGT00390000006051	ENSGT00390000016051.b	ENSGT00940000159552	ENSGT00940000159144.B	ENSGT00940000162467.a.a	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.b ##22	ENSGT00950000183023.A.e.b	ENSGT00950000183023.A.e.a	ENSGT01030000234640.a.a.c.a	ENSGT00950000183023.A.f.a.a.a	ENSGT00950000183023.A.f.a.b.a.a.a	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.a	ENSGT01050000244857.B.b	ENSGT00940000159052
Sheepshead minnow	MODERN SPECIES	189	CLDN14 (ENSCVAG00000016158)	SLC5A7 (ENSCVAG00000016151)	ENSCVAG00000016134	ENSCVAG00000016119	tmem223 (ENSCVAG00000016107)	ENSCVAG00000016094	RANBP2 (ENSCVAG00000016050)	ENSCVAG00000016031	ENSCVAG00000015861	tpt1 (ENSCVAG00000015840)	gtf2f2b (ENSCVAG00000015827)	kctd4 (ENSCVAG00000015808)	tsc22d1 (ENSCVAG00000015799)	SERP2 (ENSCVAG00000015785)	ALS2 (ENSCVAG00000015766) #20	fzd7b (ENSCVAG00000015698) ##22	ENSCVAG00000015685	ENSCVAG00000015682	ENSCVAG00000000399	ENSCVAG00000015628	ENSCVAG00000015612	xrcc1 (ENSCVAG00000000899)	drd2l (ENSCVAG00000015585)	ENSCVAG00000015446	ethe1 (ENSCVAG00000015428)	ethe1 (ENSCVAG00000015391)	ENSCVAG00000015345	ENSCVAG00000015335	ENSCVAG00000015324	irgq2 (ENSCVAG00000015303)	ENSCVAG00000015294
Mummichog	MODERN SPECIES	1060															ENSFHEG00000001371 #20	fzd7b (ENSFHEG00000001366) ##22	ENSFHEG00000001364
Pinecone sodierfish	MODERN SPECIES	13	ENSMMDG00005003609	ENSMMDG00005003616	ENSMMDG00005003619	ENSMMDG00005003621	ENSMMDG00005003623	ENSMMDG00005003627	ENSMMDG00005003630	ABI2 (ENSMMDG00005003634)	tmem237a (ENSMMDG00005003642) #18	ENSMMDG00005003647	ENSMMDG00005003651	ENSMMDG00005003655	ENSMMDG00005003658	MPP4 (ENSMMDG00005003666) #19	ALS2 (ENSMMDG00005003688) #20	FZD7 (ENSMMDG00005003709) ##22	ENSMMDG00005003729	ENSMMDG00005003740	ENSMMDG00005003746	ENSMMDG00005003751	ENSMMDG00005003759	ENSMMDG00005003760	ENSMMDG00005003767	LMLN (ENSMMDG00005003775)	ENSMMDG00005003793	si:dkey-69o16.5 (ENSMMDG00005003807)	itgav (ENSMMDG00005003902)	ENSMMDG00005004772	ENSMMDG00005004777	ENSMMDG00005004783	ENSMMDG00005004803
Cod	MODERN SPECIES	7	ENSGMOG00000026998	ENSGMOG00000035637	ENSGMOG00000027474	ENSGMOG00000013769	ENSGMOG00000015747	ENSGMOG00000031600	ENSGMOG00000014946	ENSGMOG00000035064	ENSGMOG00000011686	ENSGMOG00000016596	ENSGMOG00000023294	ENSGMOG00000029175	ENSGMOG00000016664	ENSGMOG00000009359 #19	ENSGMOG00000004647	ENSGMOG00000006715 ##22	ENSGMOG00000006687	ENSGMOG00000009947	ENSGMOG00000026445	ENSGMOG00000010016	prkag3b (ENSGMOG00000017006)	ENSGMOG00000035158	ENSGMOG00000030738	ENSGMOG00000033044	ENSGMOG00000007754	ENSGMOG00000035510	ENSGMOG00000035742	ENSGMOG00000036199	ENSGMOG00000026646	ENSGMOG00000031694	ENSGMOG00000036803
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	24	ENSGT00940000161508.a	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00940000164964.b	ENSGT00980000199010	ENSGT00510000047718.d	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b
Clupeiformes	ANCESTRAL SPECIES	164	ENSGT00940000166348	ENSGT00940000155126.s.b	ENSGT00940000161508.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000174369	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00980000199010	ENSGT00510000047718.d	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	19	CPO (ENSDCDG00000004945)	ENSDCDG00000004946	nrp2b (ENSDCDG00000004952)	nrp2b (ENSDCDG00000005067)	ENSDCDG00000003188	ENSDCDG00000003290	prkag3b (ENSDCDG00000003970)	FER1L6 (ENSDCDG00000005115)	ENSDCDG00000005183	ENSDCDG00000005185	RAPH1 (ENSDCDG00000005222)	abi2a (ENSDCDG00000007413)	tmem237a (ENSDCDG00000007617) #18	MPP4 (ENSDCDG00000007623) #19	ALS2 (ENSDCDG00000007638) #20	FZD7 (ENSDCDG00000007689) ##22	SUMO1 (ENSDCDG00000007696) #26	ENSDCDG00000007700	fam117bb (ENSDCDG00000007713)	bmpr2b (ENSDCDG00000007782)	ENSDCDG00000012586	TSPEAR (ENSDCDG00000012600)	SUMO3 (ENSDCDG00000012626)	ENSDCDG00000012725	ENSDCDG00000012767	ENSDCDG00000014295	ANKZF1 (ENSDCDG00000014662)	ENSDCDG00000014690	ENSDCDG00000014757	ENSDCDG00000014763	ENSDCDG00000014768
Denticle herring	MODERN SPECIES	179																FZD7 (ENSDCDG00000015398) ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000158239.a.a.c ##22
Characiphysae	ANCESTRAL SPECIES	3	ENSGT00940000161508.a	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00940000155065	ENSGT00940000154657.A.c	ENSGT00940000154657.B	ENSGT00680000100037	ENSGT00390000011294	ENSGT00580000081600.c.b	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b
Characiphysae_b	ANCESTRAL SPECIES	11	ENSGT00940000161508.a	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00940000155065	ENSGT00940000154657.A.c	ENSGT00940000154657.B	ENSGT00680000100037	ENSGT00390000011294	ENSGT00580000081600.c.b	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b
Characoidei	ANCESTRAL SPECIES	1	ENSGT00940000161508.a	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00940000155065	ENSGT00940000154657.A.c	ENSGT00940000154657.B	ENSGT00680000100037	ENSGT00390000011294	ENSGT00580000081600.c.b	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT01030000235195
Red-bellied piranha	MODERN SPECIES	22																FZD7 (ENSPNAG00000024668) ##22	ENSPNAG00000024653	fam117bb (ENSPNAG00000005491)	bmpr2b (ENSPNAG00000024607)	gpr39 (ENSPNAG00000004962)	SLC35F5 (ENSPNAG00000024533)	actr3 (ENSPNAG00000024434)	ENSPNAG00000024385	ENSPNAG00000024306	ENSPNAG00000024274	ddx18 (ENSPNAG00000024239)	ccdc93 (ENSPNAG00000024210)	insig2 (ENSPNAG00000024171)	en1a (ENSPNAG00000024127)	ENSPNAG00000004764	C1QL2 (ENSPNAG00000024092)
Mexicana tetra	MODERN SPECIES	10	CPO (ENSAMXG00000005569)	ENSAMXG00000005554	nrp2b (ENSAMXG00000029255)	ABCB6 (ENSAMXG00000016860)	ENSAMXG00000016833	ENSAMXG00000016816	prkag3b (ENSAMXG00000016794)	FER1L6 (ENSAMXG00000016740)	ENSAMXG00000043077	RAPH1 (ENSAMXG00000016673)	abi2a (ENSAMXG00000041989)	tmem237a (ENSAMXG00000002221) #18	MPP4 (ENSAMXG00000002002) #19	ENSAMXG00000001777	ALS2 (ENSAMXG00000001685) #20	FZD7 (ENSAMXG00000024305) ##22	ENSAMXG00000043514 #23	CARF (ENSAMXG00000024302)	fam117bb (ENSAMXG00000024297)	bmpr2b (ENSAMXG00000024291)	gpr39 (ENSAMXG00000036048)	SLC35F5 (ENSAMXG00000024287)	actr3 (ENSAMXG00000024286)	ENSAMXG00000024284	ENSAMXG00000024272	ENSAMXG00000041658	ENSAMXG00000033643	ENSAMXG00000037342	ddx18 (ENSAMXG00000024269)	ccdc93 (ENSAMXG00000024268)	insig2 (ENSAMXG00000041946)
Otomorpha	ANCESTRAL SPECIES	260									ENSGT00940000163253.b.c.a	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000002204	ENSGT00950000182905.a.b	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00390000016940.c.b.b	ENSGT00940000155522.g.b	ENSGT00390000003164	ENSGT00940000154095.b.b.a.a	ENSGT00950000183165.b.a.e.a	ENSGT00950000182882.A.b.b.f	ENSGT00940000164444.b
Clupeiformes	ANCESTRAL SPECIES	46	ENSGT00950000183208.A.c.a	ENSGT00940000157233.c	ENSGT00390000016542	ENSGT00530000064137.a.b	ENSGT00940000158526	ENSGT00940000167649	ENSGT00390000005581.a	ENSGT00390000001225	ENSGT00940000156180.e	ENSGT00500000044939	ENSGT00940000163253.b.c.a.e	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000158239.a.b ##22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000155099.k.b	ENSGT00940000154076.B.b	ENSGT00940000155518.n	ENSGT00940000157526.b	ENSGT00530000063608.B.b	ENSGT00940000163423.C.g.b	ENSGT01030000235214	ENSGT00950000183072.b.b.b	ENSGT00530000063779.A.e.b	ENSGT00940000167474	ENSGT00940000156219.e.b
Denticle herring	MODERN SPECIES	15	ENSDCDG00000000205	zeb2b (ENSDCDG00000000270)	ACVR2A (ENSDCDG00000000525)	orc4 (ENSDCDG00000001038)	MBD5 (ENSDCDG00000001067)	mstna (ENSDCDG00000001073)	ftcd (ENSDCDG00000001081)	cnot9 (ENSDCDG00000001090)	ENSDCDG00000001319	cyp20a1 (ENSDCDG00000002398)	tmem237b (ENSDCDG00000002406) #18	zp2l2 (ENSDCDG00000002409)	MPP4 (ENSDCDG00000002418) #19	ALS2 (ENSDCDG00000002468) #20	cdk15 (ENSDCDG00000002501) #21	fzd7b (ENSDCDG00000002516) ##22	sumo1 (ENSDCDG00000002518) #26	ENSDCDG00000002523	nop58 (ENSDCDG00000002539)	ENSDCDG00000002554	ENSDCDG00000002765	KCNH7 (ENSDCDG00000009421)	ENSDCDG00000009470	ENSDCDG00000009484	scn1lab (ENSDCDG00000009733)	ENSDCDG00000013261	CSRNP3 (ENSDCDG00000013262)	ENSDCDG00000013268	ENSDCDG00000013270	B3GALT1 (ENSDCDG00000013273)	CERS6 (ENSDCDG00000013281)
Atlantic herring	MODERN SPECIES	13	orc4 (ENSCHAG00000011816)	ENSCHAG00000011781	ENSCHAG00000011763	ENSCHAG00000011749	mstna (ENSCHAG00000011741)	ENSCHAG00000011727	ftcd (ENSCHAG00000011671)	cnot9 (ENSCHAG00000011642)	ENSCHAG00000009301	cyp20a1 (ENSCHAG00000009217)	zp2l2 (ENSCHAG00000009198)	tmem237b (ENSCHAG00000009153) #18	MPP4 (ENSCHAG00000008043) #19	ALS2 (ENSCHAG00000007884) #20	cdk15 (ENSCHAG00000007829) #21	fzd7b (ENSCHAG00000007812) ##22	sumo1 (ENSCHAG00000007753) #26	nop58 (ENSCHAG00000007579)	SP3 (ENSCHAG00000007545)	ENSCHAG00000006018	ENSCHAG00000005919	ENSCHAG00000005850	ENSCHAG00000005781	ENSCHAG00000005759	scn1lab (ENSCHAG00000001804)	ENSCHAG00000001653	ENSCHAG00000001617	ENSCHAG00000001566	ABCB11 (ENSCHAG00000001238)	ENSCHAG00000001027	B3GALT1 (ENSCHAG00000000981)
Otophysi	ANCESTRAL SPECIES	44	ENSGT00530000063779.A.e.b	ENSGT00940000167474	ENSGT00940000156219.e.b	ENSGT00940000155749.d	ENSGT01050000244937.a.a.q	ENSGT00390000010170.a.b	ENSGT00390000003338	ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00940000163253.b.c.a	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000161395	ENSGT00930000150950.b	ENSGT00390000002204	ENSGT00950000182905.a.b	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000155248.vb	ENSGT00390000012731.a.b.i	ENSGT00390000017916	ENSGT00390000002188	ENSGT00940000160000	ENSGT00390000018525.a.b.e.a	ENSGT00530000067036.b
Characiphysae	ANCESTRAL SPECIES	18	ENSGT00530000063779.A.e.b	ENSGT00940000167474	ENSGT00940000156219.e.b	ENSGT00940000155749.d	ENSGT01050000244937.a.a.q	ENSGT00390000010170.a.b	ENSGT00390000003338	ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00940000163253.b.c.a	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000161395	ENSGT00930000150950.b	ENSGT00390000002204	ENSGT00950000182905.a.b	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000155248.vb.b.a	ENSGT00940000155248.vb.b.b	ENSGT00390000012731.a.b.i	ENSGT00390000017916	ENSGT00390000002188	ENSGT00940000160000	ENSGT00390000018525.a.b.e.a
Channel catfish	MODERN SPECIES	3	scn1lab (ENSIPUG00000019428)	XIRP2 (ENSIPUG00000019474)	B3GALT1 (ENSIPUG00000019492)	ATP7B (ENSIPUG00000019501)	htr2a (ENSIPUG00000019516)	sucla2 (ENSIPUG00000019521)	nudt15 (ENSIPUG00000019557)	itm2b (ENSIPUG00000019560)	abi2b (ENSIPUG00000019578)	CYP20A1 (ENSIPUG00000019612)	zp2l2 (ENSIPUG00000019699)	tmem237 (ENSIPUG00000020819) #18	MPP4 (ENSIPUG00000020832) #19	als2 (ENSIPUG00000020848) #20	cdk15 (ENSIPUG00000020913) #21	fzd7b (ENSIPUG00000020929) ##22	sumo1 (ENSIPUG00000020934) #26	nop58 (ENSIPUG00000020953)	TCF23 (ENSIPUG00000020982)	wdr12 (ENSIPUG00000020990)	ercc3 (ENSIPUG00000021000)	cyp27c1 (ENSIPUG00000021019)	map3k2 (ENSIPUG00000021031)	ENSIPUG00000021092	kalrnb (ENSIPUG00000021106)	ENSIPUG00000021144	ENSIPUG00000021241	ccdc14 (ENSIPUG00000021247)	iqcb1 (ENSIPUG00000021257)	Tbx19 (ENSIPUG00000021264)	sft2d2b (ENSIPUG00000021271)
Characiphysae_b	ANCESTRAL SPECIES	46	ENSGT00530000063779.A.e.b	ENSGT00940000167474	ENSGT00940000156219.e.b	ENSGT00940000155749.d	ENSGT01050000244937.a.a.q	ENSGT00390000010170.a.b	ENSGT00390000003338	ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00940000163253.b.c.a	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000161395	ENSGT00930000150950.b	ENSGT00390000002204	ENSGT00950000182905.a.b	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000155248.vb.b.a	ENSGT00940000155248.vb.b.b	ENSGT00390000012731.a.b.i	ENSGT00390000017916	ENSGT00390000002188	ENSGT00940000160000	ENSGT00390000018525.a.b.e.a
Electric eel	MODERN SPECIES	373							ENSEEEG00000012460	ENSEEEG00000012458	ENSEEEG00000012457	ENSEEEG00000012456	gga1 (ENSEEEG00000012417)	ddx17 (ENSEEEG00000011062)	ENSEEEG00000011024	ALS2 (ENSEEEG00000011020) #20	cdk15 (ENSEEEG00000011014) #21	fzd7b (ENSEEEG00000011013) ##22	sumo1 (ENSEEEG00000011009) #26	nop58 (ENSEEEG00000011002)	ENSEEEG00000010998	wdr12 (ENSEEEG00000010992)	ercc3 (ENSEEEG00000010980)	cyp27c1 (ENSEEEG00000010979)	MAP3K2 (ENSEEEG00000010976)	ENSEEEG00000010974	kalrnb (ENSEEEG00000010973)	ENSEEEG00000010969	ENSEEEG00000010966	iqcb1 (ENSEEEG00000010965)	TBX19 (ENSEEEG00000010964)	sft2d2b (ENSEEEG00000010963)	zgc:112023 (ENSEEEG00000010962)
Characoidei	ANCESTRAL SPECIES	23	ENSGT00940000163423.C.g.b	ENSGT00530000063779.A.e.b	ENSGT00940000156219.e.b	ENSGT00940000155749.d	ENSGT01050000244937.a.a.q	ENSGT00390000010170.a.b	ENSGT00390000003338	ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00940000163253.b.c.a	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000161395	ENSGT00930000150950.b	ENSGT00390000002204	ENSGT00950000182905.a.b	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000155248.vb.b.a	ENSGT00940000155248.vb.b.b	ENSGT00390000012731.a.b.i	ENSGT00390000017916	ENSGT00390000002188	ENSGT00940000160000	ENSGT00390000018525.a.b.e.a
Red-bellied piranha	MODERN SPECIES	81	scn1lab (ENSPNAG00000018706)	XIRP2 (ENSPNAG00000018737)	B3GALT1 (ENSPNAG00000018755)	ATP7B (ENSPNAG00000018792)	HTR2A (ENSPNAG00000018815)	sucla2 (ENSPNAG00000018855)	nudt15 (ENSPNAG00000003555)	itm2ba (ENSPNAG00000018912)	abi2b (ENSPNAG00000018990)	cyp20a1 (ENSPNAG00000003568)	zp2l2 (ENSPNAG00000021706)	tmem237b (ENSPNAG00000021847) #18	MPP4 (ENSPNAG00000021867) #19	ALS2 (ENSPNAG00000005633) #20	cdk15 (ENSPNAG00000022210) #21	fzd7b (ENSPNAG00000022238) ##22	sumo1 (ENSPNAG00000022274) #26	nop58 (ENSPNAG00000022346)	ENSPNAG00000022382	wdr12 (ENSPNAG00000022459)	ercc3 (ENSPNAG00000005748)	cyp27c1 (ENSPNAG00000022597)	MAP3K2 (ENSPNAG00000022689)	ENSPNAG00000022735	KALRN (ENSPNAG00000022882)	ENSPNAG00000022891	ENSPNAG00000022905	iqcb1 (ENSPNAG00000022923)	ENSPNAG00000006472	sft2d2b (ENSPNAG00000023012)	ENSPNAG00000023031
Mexicana tetra	MODERN SPECIES	1	ENSAMXG00000038514	B3GALT1 (ENSAMXG00000025970)	ATP7B (ENSAMXG00000004971)	HTR2A (ENSAMXG00000004978)	sucla2 (ENSAMXG00000004980)	nudt15 (ENSAMXG00000039492)	itm2ba (ENSAMXG00000034379)	abi2b (ENSAMXG00000035798)	cyp20a1 (ENSAMXG00000004986)	zp2l2 (ENSAMXG00000034751)	tmem237b (ENSAMXG00000041701) #18	MPP4 (ENSAMXG00000005012) #19	ENSAMXG00000035715	ALS2 (ENSAMXG00000005016) #20	cdk15 (ENSAMXG00000005019) #21	fzd7b (ENSAMXG00000025971) ##22	ENSAMXG00000005020	nop58 (ENSAMXG00000005022)	ENSAMXG00000032532	wdr12 (ENSAMXG00000005026)	ercc3 (ENSAMXG00000036947)	cyp27c1 (ENSAMXG00000005029)	MAP3K2 (ENSAMXG00000005030)	ENSAMXG00000038610	kalrnb (ENSAMXG00000040786)	ENSAMXG00000031874	ENSAMXG00000042659	ENSAMXG00000005037	iqcb1 (ENSAMXG00000005039)	TBX19 (ENSAMXG00000005041)	sft2d2b (ENSAMXG00000030882)
Cyprinoidei	ANCESTRAL SPECIES	73	ENSGT00530000063779.A.e.b	ENSGT00940000158313.b.f.b	ENSGT00940000156219.e.b	ENSGT00940000155749.d	ENSGT01050000244937.a.a.q	ENSGT00390000010170.a.b	ENSGT00390000003338	ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00940000163253.b.c.a	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000161395	ENSGT00930000150950.b	ENSGT00390000002204	ENSGT00950000182905.a.b	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00940000155248.vb	ENSGT00390000017916	ENSGT00390000002188	ENSGT00940000160000	ENSGT00390000018525.a.b.e.a	ENSGT00530000067036.b	ENSGT00940000161625.m
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	20	ENSGT01030000235214.f	ENSGT00530000063779.A.e.b.a	ENSGT00940000158313.b.f.b	ENSGT00940000156219.e.b.d	ENSGT00940000155749.d.s	ENSGT01050000244937.a.a.q.a	ENSGT00390000010170.a.b.z	ENSGT00390000003338.x	ENSGT00950000183115.b.a.m.b.b	ENSGT00940000156089.e.a.j	ENSGT00500000044939.k.a	ENSGT00940000163253.b.c.a.c	ENSGT00940000156444.c.o #19	ENSGT00940000155861.C.e.h #20	ENSGT00940000159606.e #21	ENSGT00940000158239.a.a.d.a ##22	ENSGT00940000153534.A.v	ENSGT00940000161395.d	ENSGT00930000150950.b.a	ENSGT00390000002204.c	ENSGT00950000182905.a.b.e	ENSGT00940000156884.a	ENSGT00950000182905.a.a.a.a.a.b.c	ENSGT00940000155248.vb.d	ENSGT00940000160000.a	ENSGT00390000018525.a.b.e.a.a	ENSGT00940000161625.m	ENSGT00940000165420.h.a	ENSGT00390000014995.q.b	ENSGT00390000003896.d	ENSGT00940000177172
Cyprininae_a	ANCESTRAL SPECIES	13	ENSGT00530000063779.A.e.b.a	ENSGT00940000158313.b.f.b	ENSGT00940000156219.e.b.d	ENSGT00940000155749.d.s	ENSGT01050000244937.a.a.q.a	ENSGT00390000010170.a.b.z	ENSGT00390000003338.x	ENSGT00950000183115.b.a.m.b.b	ENSGT00940000156089.e.a.j	ENSGT00500000044939.k.a	ENSGT00940000163253.b.c.a.c	ENSGT00390000005159.j.c #18	ENSGT00940000156444.c.o #19	ENSGT00940000155861.C.e.h #20	ENSGT00940000159606.e #21	ENSGT00940000158239.a.a.d.a ##22	ENSGT00940000153534.A.v	ENSGT00940000161395.d	ENSGT00930000150950.b.a	ENSGT00390000002204.c	ENSGT00950000182905.a.b.e	ENSGT00940000156884.a	ENSGT00950000182905.a.a.a.a.a.b.c	ENSGT00940000160000.a	ENSGT00390000018525.a.b.e.a.a	ENSGT00940000161625.m	ENSGT00940000165420.h.a	ENSGT00390000014995.q.b	ENSGT00390000003896.d	ENSGT00940000177172	ENSGT00950000182910.a.a.d.a
Golden-line barbel	MODERN SPECIES	62	ENSSGRG00000028693	ENSSGRG00000028694	B3GALT1 (ENSSGRG00000028695)	ATP7B (ENSSGRG00000028705)	HTR2A (ENSSGRG00000029808)	sucla2 (ENSSGRG00000029813)	nudt15 (ENSSGRG00000030224)	itm2ba (ENSSGRG00000030225)	abi2b (ENSSGRG00000030226)	cyp20a1 (ENSSGRG00000030433)	zp2l2 (ENSSGRG00000030484)	tmem237b (ENSSGRG00000030485) #18	MPP4 (ENSSGRG00000030486) #19	ALS2 (ENSSGRG00000030626) #20	cdk15 (ENSSGRG00000030926) #21	fzd7b (ENSSGRG00000030931) ##22	ENSSGRG00000030932	nop58 (ENSSGRG00000030936)	ENSSGRG00000031163	wdr12 (ENSSGRG00000031171)	ercc3 (ENSSGRG00000031398)	cyp27c1 (ENSSGRG00000031599)	MAP3K2 (ENSSGRG00000031660)	ENSSGRG00000031677	KALRN (ENSSGRG00000031722)	ENSSGRG00000031919	ENSSGRG00000031920	sft2d2b (ENSSGRG00000031921)	zgc:64065 (ENSSGRG00000031924)	rgn (ENSSGRG00000031927)	vps16 (ENSSGRG00000031932)
Common carp reference	MODERN SPECIES	16	scn1lab (ENSCCRG00000048804)	ENSCCRG00000059510	ENSCCRG00000057743	ENSCCRG00000069681	HTR2A (ENSCCRG00000048728)	sucla2 (ENSCCRG00000048723)	nudt15 (ENSCCRG00000048717)	itm2ba (ENSCCRG00000048714)	abi2b (ENSCCRG00000060284)	cyp20a1 (ENSCCRG00000048097)	zp2l2 (ENSCCRG00000063620)	tmem237b (ENSCCRG00000043283) #18	MPP4 (ENSCCRG00000042683) #19	ALS2 (ENSCCRG00000041937) #20	cdk15 (ENSCCRG00000062354) #21	fzd7b (ENSCCRG00000057373) ##22	sumo1 (ENSCCRG00000045652) #26	nop58 (ENSCCRG00000065019)	ENSCCRG00000067378	wdr12 (ENSCCRG00000047029)	ercc3 (ENSCCRG00000041737)	cyp27c1 (ENSCCRG00000041350)	MAP3K2 (ENSCCRG00000041950)	ENSCCRG00000018155	kalrnb (ENSCCRG00000018094)	ENSCCRG00000045306	ENSCCRG00000065509	ENSCCRG00000058701	ENSCCRG00000005514	ENSCCRG00000011714	sft2d2b (ENSCCRG00000075601)
Goldfish	MODERN SPECIES	24	scn1lab (ENSCARG00000012923)	ENSCARG00000023279	XIRP2 (ENSCARG00000023297)	B3GALT1 (ENSCARG00000023319)	ATP7B (ENSCARG00000023483)	HTR2A (ENSCARG00000028716)	sucla2 (ENSCARG00000028844)	itm2ba (ENSCARG00000030326)	ENSCARG00000030334	abi2b (ENSCARG00000030359)	cyp20a1 (ENSCARG00000030614)	zp2l2 (ENSCARG00000030998)	MPP4 (ENSCARG00000031051) #19	ALS2 (ENSCARG00000031640) #20	cdk15 (ENSCARG00000031750) #21	fzd7b (ENSCARG00000031842) ##22	sumo1 (ENSCARG00000031848) #26	nop58 (ENSCARG00000031870)	ENSCARG00000032169	wdr12 (ENSCARG00000032179)	ercc3 (ENSCARG00000032225)	cyp27c1 (ENSCARG00000032390)	MAP3K2 (ENSCARG00000032497)	ENSCARG00000033101	ENSCARG00000033117	ENSCARG00000033299	ENSCARG00000033848	ENSCARG00000033853	sft2d2b (ENSCARG00000033875)	zgc:112023 (ENSCARG00000033894)	ENSCARG00000033903
Cyprininae	ANCESTRAL SPECIES	23	ENSGT01030000235214.e	ENSGT00940000163423.C.g.b.g	ENSGT00530000063779.A.e.b.b	ENSGT00940000156219.e.b.c	ENSGT00940000155749.d.t	ENSGT01050000244937.a.a.q.b	ENSGT00390000010170.a.b.y	ENSGT00390000003338.w.a	ENSGT00950000183115.b.a.m.b.a	ENSGT00940000156089.e.a.i	ENSGT00500000044939.k.b	ENSGT00390000005159.j #18	ENSGT00940000156444.c.p #19	ENSGT00940000155861.C.e.g #20	ENSGT00940000159606.f #21	ENSGT00940000158239.a.a.d.b ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A.u.b	ENSGT00940000161395.c	ENSGT00930000150950.b.b	ENSGT00390000002204.d	ENSGT00950000182905.a.b.f	ENSGT00940000156884.b	ENSGT00950000182905.a.a.a.a.a.b.d	ENSGT00940000155248.vb.c	ENSGT00390000017916.b	ENSGT00390000002188	ENSGT00940000160000.b	ENSGT00390000018525.a.b.e.a.b	ENSGT00940000165420.h.b	ENSGT00390000014995.q.a
Goldfish	MODERN SPECIES	46	ENSCARG00000011530	ENSCARG00000011490	ENSCARG00000011479	scn1lab (ENSCARG00000010628)	XIRP2 (ENSCARG00000010528)	ATP7B (ENSCARG00000003423)	HTR2A (ENSCARG00000003093)	sucla2 (ENSCARG00000002972)	nudt15 (ENSCARG00000002927)	itm2ba (ENSCARG00000002902)	abi2b (ENSCARG00000002803)	cyp20a1 (ENSCARG00000002438)	MPP4 (ENSCARG00000002269) #19	ALS2 (ENSCARG00000001627) #20	cdk15 (ENSCARG00000001489) #21	fzd7b (ENSCARG00000001463) ##22	sumo1 (ENSCARG00000001460) #26	ENSCARG00000001451	wdr12 (ENSCARG00000001441)	ercc3 (ENSCARG00000001397)	MAP3K2 (ENSCARG00000001309)	nop58 (ENSCARG00000001078)	ENSCARG00000000958	ENSCARG00000000649	ENSCARG00000000558	iqcb1 (ENSCARG00000000538)	TBX19 (ENSCARG00000000527)	sft2d2b (ENSCARG00000000518)	ENSCARG00000000516	rgn (ENSCARG00000000509)	vps16 (ENSCARG00000000447)
Cyprininae_a	ANCESTRAL SPECIES	30	ENSGT00530000063779.A.e.b.b	ENSGT00940000156219.e.b.c	ENSGT00940000155749.d.t	ENSGT01050000244937.a.a.q.b	ENSGT00390000010170.a.b.y	ENSGT00390000003338.w.a	ENSGT00390000003338.w.b	ENSGT00950000183115.b.a.m.b.a	ENSGT00940000156089.e.a.i	ENSGT00500000044939.k.b	ENSGT00940000163253.b.c.a.d	ENSGT00390000005159.j.d #18	ENSGT00940000156444.c.p #19	ENSGT00940000155861.C.e.g #20	ENSGT00940000159606.f #21	ENSGT00940000158239.a.a.d.b ##22	ENSGT00940000154319 #26	ENSGT00940000153534.A.u.b	ENSGT00940000161395.c	ENSGT00930000150950.b.b	ENSGT00390000002204.d	ENSGT00950000182905.a.b.f	ENSGT00940000156884.b	ENSGT00950000182905.a.a.a.a.a.b.d	ENSGT00940000155248.vb.c	ENSGT00390000017916.b	ENSGT00940000155248.vb.d	ENSGT00390000002188	ENSGT00940000160000.b	ENSGT00390000018525.a.b.e.a.b	ENSGT00940000178870
Common carp reference	MODERN SPECIES	10	ENSCCRG00000050277	scn1lab (ENSCCRG00000001776)	ENSCCRG00000001805	ENSCCRG00000055892	ENSCCRG00000078893	ENSCCRG00000001852	ENSCCRG00000070031	sucla2 (ENSCCRG00000070969)	itm2ba (ENSCCRG00000048108)	abi2b (ENSCCRG00000048101)	cyp20a1 (ENSCCRG00000046550)	tmem237b (ENSCCRG00000048096) #18	MPP4 (ENSCCRG00000048085) #19	ALS2 (ENSCCRG00000047079) #20	cdk15 (ENSCCRG00000047046) #21	fzd7b (ENSCCRG00000063192) ##22	SUMO1 (ENSCCRG00000052988) #26	nop58 (ENSCCRG00000073472)	ENSCCRG00000071429	wdr12 (ENSCCRG00000064894)	ercc3 (ENSCCRG00000020084)	cyp27c1 (ENSCCRG00000019898)	ENSCCRG00000045614	MAP3K2 (ENSCCRG00000038364)	ENSCCRG00000007501	kalrnb (ENSCCRG00000015973)	ENSCCRG00000061632	ENSCCRG00000011689	iqcb1 (ENSCCRG00000011706)	ENSCCRG00000005503	sft2d2b (ENSCCRG00000077420)
Golden-line barbel	MODERN SPECIES	33	scn1lab (ENSSGRG00000053418)	XIRP2 (ENSSGRG00000053413)	B3GALT1 (ENSSGRG00000053412)	ATP7B (ENSSGRG00000053367)	HTR2A (ENSSGRG00000053365)	sucla2 (ENSSGRG00000053333)	nudt15 (ENSSGRG00000053332)	itm2ba (ENSSGRG00000053331)	itm2ba (ENSSGRG00000053330)	abi2b (ENSSGRG00000053250)	zp2l2 (ENSSGRG00000053247)	tmem237b (ENSSGRG00000053246) #18	MPP4 (ENSSGRG00000053245) #19	ALS2 (ENSSGRG00000053244) #20	cdk15 (ENSSGRG00000053243) #21	fzd7b (ENSSGRG00000053242) ##22	sumo1 (ENSSGRG00000053240) #26	ENSSGRG00000053239	ENSSGRG00000053234	wdr12 (ENSSGRG00000053233)	ercc3 (ENSSGRG00000053232)	cyp27c1 (ENSSGRG00000053231)	MAP3K2 (ENSSGRG00000053227)	ENSSGRG00000053218	kalrnb (ENSSGRG00000053217)	ENSSGRG00000053208	ENSSGRG00000053201	ENSSGRG00000053200	ENSSGRG00000053199	ENSSGRG00000053198	TBX19 (ENSSGRG00000053197)
Zebrafish	MODERN SPECIES	21	B3GALT1 (ENSDARG00000079700)	ATP7B (ENSDARG00000058145)	HTR2A (ENSDARG00000058165)	sucla2 (ENSDARG00000005359)	nudt15 (ENSDARG00000113961)	itm2ba (ENSDARG00000007098)	abi2b (ENSDARG00000014875)	cyp20a1 (ENSDARG00000006040)	zp2l2 (ENSDARG00000004898)	ENSDARG00000071183	tmem237b (ENSDARG00000074248) #18	ENSDARG00000075240	MPP4 (ENSDARG00000076872) #19	ALS2 (ENSDARG00000076924) #20	cdk15 (ENSDARG00000006093) #21	fzd7b (ENSDARG00000027589) ##22	sumo1 (ENSDARG00000044267) #26	nop58 (ENSDARG00000104353)	ENSDARG00000087381	wdr12 (ENSDARG00000003287)	ercc3 (ENSDARG00000002402)	cyp27c1 (ENSDARG00000092660)	MAP3K2 (ENSDARG00000062884)	ENSDARG00000073764	ENSDARG00000044264	kalrnb (ENSDARG00000063538)	ENSDARG00000098734	iqcb1 (ENSDARG00000093431)	ENSDARG00000088058	iqcb1 (ENSDARG00000101032)	TBX19 (ENSDARG00000079187)
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Sauria	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Archelosauria	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Aves	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
African ostrich	MODERN SPECIES	35																ENSSCUG00000000081 ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES	178	ENSGT00950000183214.a.b.a.b.f.b	ENSGT00940000155270	ENSGT00940000156160	ENSGT00390000000862	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00530000063873.B	ENSGT00940000178309	ENSGT00940000156552.c.a	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000005159 #18	ENSGT00940000156444 #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT01090000263180	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449	ENSGT00940000164964.b
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	86	ENSGT00940000155126.s.a	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.g	ENSGT00940000156160	ENSGT00940000157916	ENSGT00940000164110.a.a	ENSGT00940000159069	ENSGT00530000063410.b	ENSGT00530000063873.B.e	ENSGT00940000178309	ENSGT00940000156552.c.a.h	ENSGT00390000009001	ENSGT00390000005159.l #18	ENSGT00940000156444.e #19	ENSGT00940000159606 #21	ENSGT00940000158239.a.b.a ##22	ENSGT00940000172395	ENSGT00940000154319.c.b #26	ENSGT00940000153534.A	ENSGT00390000013916	ENSGT00390000005530.a.a.l	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.d	ENSGT00980000199010	ENSGT00510000047718.c.a	ENSGT00950000182895.a.b.u.a	ENSGT00390000004977.d.b	ENSGT00940000164909.d	ENSGT00950000182942.a.b	ENSGT01030000234635.a.b.a.b.b.b	ENSGT00940000156851
Asian bonytongue	MODERN SPECIES	3	ENSSFOG00015016998	NRP2 (ENSSFOG00015017053)	abcb6a (ENSSFOG00015017166)	retreg2 (ENSSFOG00015017310)	FER1L6 (ENSSFOG00015017331)	mdh1b (ENSSFOG00015017397)	ENSSFOG00015025889	CTLA4 (ENSSFOG00015017416)	ENSSFOG00015017428	RAPH1 (ENSSFOG00015017453)	ENSSFOG00015026680	ABI2 (ENSSFOG00015017511)	TMEM237 (ENSSFOG00015017568) #18	MPP4 (ENSSFOG00015017618) #19	cdk15 (ENSSFOG00015017727) #21	fzd7a (ENSSFOG00015017773) ##22	ENSSFOG00015017787	ENSSFOG00015017843	nop58 (ENSSFOG00015017870)	CARF (ENSSFOG00015017952)	ical1 (ENSSFOG00015017999)	FAM117B (ENSSFOG00015029893)	BMPR2 (ENSSFOG00015018096)	ENSSFOG00015031245	TSPEAR (ENSSFOG00015018177)	sumo1 (ENSSFOG00015029865) #26	ENSSFOG00015026410	ENSSFOG00015018241	glb1l (ENSSFOG00015018356)	chrna1 (ENSSFOG00015018385)	wipf1a (ENSSFOG00015018399)
P. kingsleyae	MODERN SPECIES	8	abcb6a (ENSPKIG00000002713)	ENSPKIG00000002839	retreg2 (ENSPKIG00000002909)	ENSPKIG00000002927	FER1L6 (ENSPKIG00000002971)	mdh1b (ENSPKIG00000003031)	ENSPKIG00000003058	ENSPKIG00000003078	ENSPKIG00000003089	ENSPKIG00000003105	ENSPKIG00000003117	ABI2 (ENSPKIG00000003196)	TMEM237 (ENSPKIG00000003302) #18	MPP4 (ENSPKIG00000003356) #19	cdk15 (ENSPKIG00000003440) #21	fzd7a (ENSPKIG00000003493) ##22	ENSPKIG00000003510	sumo1 (ENSPKIG00000003552) #26	nop58 (ENSPKIG00000003585)	CARF (ENSPKIG00000003659)	ical1 (ENSPKIG00000003716)	ENSPKIG00000003801	BMPR2 (ENSPKIG00000003884)	ENSPKIG00000004005	TSPEAR (ENSPKIG00000004043)	ENSPKIG00000004085	sumo3a (ENSPKIG00000004110)	ENSPKIG00000004144	ENSPKIG00000004202	glb1l (ENSPKIG00000004321)	chrna1 (ENSPKIG00000004406)
Osteoglossiformes	ANCESTRAL SPECIES	79	ENSGT00940000166348	ENSGT00940000161508.b	ENSGT00950000183214.a.b.a.b.f.b	ENSGT00940000155270.h	ENSGT00390000000862	ENSGT00950000183019.f.b.b.c	ENSGT00940000164110.b	ENSGT01030000234607.A.b	ENSGT00530000063873.B.f	ENSGT00940000156552.c.a.g	ENSGT00940000156089	ENSGT00500000044939	ENSGT00390000005159.k #18	ENSGT00940000156444.f #19	ENSGT00940000155861.C.e #20	ENSGT00940000158239.a.b.b ##22	ENSGT00940000154319.c.a #26	ENSGT00930000150950.b	ENSGT00390000005530.a.a.k	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.c	ENSGT00940000157267	ENSGT00510000047718.c.b	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.c	ENSGT00390000005911	ENSGT00390000014839.b	ENSGT00940000161051.a.a.a.a.b
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	35	ENSPKIG00000007941	cpo (ENSPKIG00000007966)	NRP2 (ENSPKIG00000007999)	cnppd1 (ENSPKIG00000008050)	prkag3b (ENSPKIG00000008081)	retreg2 (ENSPKIG00000008116)	ENSPKIG00000008149	ENSPKIG00000008189	RAPH1 (ENSPKIG00000008230)	ABI2 (ENSPKIG00000008314)	cyp20a1 (ENSPKIG00000008410)	TMEM237 (ENSPKIG00000008472) #18	MPP4 (ENSPKIG00000008511) #19	ALS2 (ENSPKIG00000008582) #20	ENSPKIG00000008738	FZD7 (ENSPKIG00000008751) ##22	ENSPKIG00000008769 ##22	sumo1 (ENSPKIG00000008789) #26	wdr12 (ENSPKIG00000008839)	fam117bb (ENSPKIG00000008905)	BMPR2 (ENSPKIG00000008953)	ENSPKIG00000009015	TSPEAR (ENSPKIG00000009073)	ube2g2 (ENSPKIG00000009101)	sumo3b (ENSPKIG00000009126)	ENSPKIG00000009145	ENSPKIG00000009236	ANKZF1 (ENSPKIG00000009427)	atg9a (ENSPKIG00000009492)	ENSPKIG00000009623	zgc:112416 (ENSPKIG00000009752)
P. kingsleyae	MODERN SPECIES	35	cpo (ENSPKIG00000007966)	NRP2 (ENSPKIG00000007999)	cnppd1 (ENSPKIG00000008050)	prkag3b (ENSPKIG00000008081)	retreg2 (ENSPKIG00000008116)	ENSPKIG00000008149	ENSPKIG00000008189	RAPH1 (ENSPKIG00000008230)	ABI2 (ENSPKIG00000008314)	cyp20a1 (ENSPKIG00000008410)	TMEM237 (ENSPKIG00000008472) #18	MPP4 (ENSPKIG00000008511) #19	ALS2 (ENSPKIG00000008582) #20	ENSPKIG00000008738	FZD7 (ENSPKIG00000008751) ##22	ENSPKIG00000008769 ##22	sumo1 (ENSPKIG00000008789) #26	wdr12 (ENSPKIG00000008839)	fam117bb (ENSPKIG00000008905)	BMPR2 (ENSPKIG00000008953)	ENSPKIG00000009015	TSPEAR (ENSPKIG00000009073)	ube2g2 (ENSPKIG00000009101)	sumo3b (ENSPKIG00000009126)	ENSPKIG00000009145	ENSPKIG00000009236	ANKZF1 (ENSPKIG00000009427)	atg9a (ENSPKIG00000009492)	ENSPKIG00000009623	zgc:112416 (ENSPKIG00000009752)	ENSPKIG00000009766
Asian bonytongue	MODERN SPECIES	5	ENSSFOG00015031434	ENSSFOG00015006078	ENSSFOG00015027322	NRP2 (ENSSFOG00015006142)	cnppd1 (ENSSFOG00015006238)	prkag3b (ENSSFOG00015006261)	ENSSFOG00015006297	ENSSFOG00015006306	ENSSFOG00015025277	RAPH1 (ENSSFOG00015006320)	ABI2 (ENSSFOG00015006375)	cyp20a1 (ENSSFOG00015006435)	TMEM237 (ENSSFOG00015006497) #18	MPP4 (ENSSFOG00015006525) #19	ALS2 (ENSSFOG00015006570) #20	FZD7 (ENSSFOG00015006669) ##22	SUMO1 (ENSSFOG00015025642) #26	ENSSFOG00015027483	wdr12 (ENSSFOG00015006713)	ICA1L (ENSSFOG00015030869)	fam117bb (ENSSFOG00015032151)	BMPR2 (ENSSFOG00015006844)	ENSSFOG00015006907	TSPEAR (ENSSFOG00015007048)	ube2g2 (ENSSFOG00015026166)	sumo3a (ENSSFOG00015007119)	ENSSFOG00015027566	ENSSFOG00015007347	ANKZF1 (ENSSFOG00015007560)	atg9a (ENSSFOG00015007618)	ENSSFOG00015007680
Clupeocephala	ANCESTRAL SPECIES	322														ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT01090000263180	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000157904.a.a
Otomorpha	ANCESTRAL SPECIES	24	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00940000164964.b	ENSGT00980000199010	ENSGT00510000047718.d	ENSGT00950000182895.a.b.v	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913
Otophysi	ANCESTRAL SPECIES	203	ENSGT01030000234567.B.a.a.b.a.b	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00940000164964.b
Characiphysae	ANCESTRAL SPECIES	3	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00940000155065	ENSGT00940000154657.A.c	ENSGT00940000154657.B	ENSGT00680000100037	ENSGT00390000011294	ENSGT00580000081600.c.b	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT01030000235195
Characiphysae_b	ANCESTRAL SPECIES	11	ENSGT01030000235117	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.a.c ##22	ENSGT00940000158239.a.b ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b	ENSGT00390000005949	ENSGT00940000155065	ENSGT00940000154657.A.c	ENSGT00940000154657.B	ENSGT00680000100037	ENSGT00390000011294	ENSGT00580000081600.c.b	ENSGT00940000160811.c.b	ENSGT00950000183074.C	ENSGT00940000156913.b.j.b	ENSGT01030000235195
Electric eel	MODERN SPECIES	176								ENSEEEG00000018942	prkag3b (ENSEEEG00000018996)	ENSEEEG00000019024	FER1L6 (ENSEEEG00000019025)	ENSEEEG00000019026	RAPH1 (ENSEEEG00000019030)	abi2a (ENSEEEG00000019071)	ALS2 (ENSEEEG00000019074) #20	fzd7a (ENSEEEG00000019075) ##22	ENSEEEG00000019076	fam117bb (ENSEEEG00000019078)	bmpr2b (ENSEEEG00000019083)	gpr39 (ENSEEEG00000019087)	SLC35F5 (ENSEEEG00000019095)	actr3 (ENSEEEG00000019121)	ENSEEEG00000019395	ENSEEEG00000019404	ENSEEEG00000019405	ENSEEEG00000019406	zgc:113337 (ENSEEEG00000019407)	CFAP91 (ENSEEEG00000019408)	nr1i2 (ENSEEEG00000019417)	gsk3ba (ENSEEEG00000019444)	GPR156 (ENSEEEG00000019446)
Channel catfish	MODERN SPECIES	25	cfap65 (ENSIPUG00000010768)	ENSIPUG00000010818	fn1a (ENSIPUG00000010834)	ENSIPUG00000010916	nrp2b (ENSIPUG00000011051)	ENSIPUG00000011119	ENSIPUG00000011147	ttll4 (ENSIPUG00000011178)	prkag3b (ENSIPUG00000011296)	FER1L6 (ENSIPUG00000011610)	ENSIPUG00000011861	raph1 (ENSIPUG00000011891)	abi2a (ENSIPUG00000012006)	tmem237a (ENSIPUG00000012105) #18	ALS2 (ENSIPUG00000012149) #20	fzd7a (ENSIPUG00000012373) ##22	fam117b (ENSIPUG00000012389)	Bmpr2 (ENSIPUG00000012409)	gpr39 (ENSIPUG00000012486)	slc35f5 (ENSIPUG00000012504)	actr3 (ENSIPUG00000012560)	ENSIPUG00000012623	ENSIPUG00000012829	ddx18 (ENSIPUG00000012876)	ccdc93 (ENSIPUG00000012974)	insig2 (ENSIPUG00000013001)	en1 (ENSIPUG00000013029)	ENSIPUG00000013048	c1ql2 (ENSIPUG00000013069)	ENSIPUG00000013085	ENSIPUG00000013095
Cyprinoidei	ANCESTRAL SPECIES	59	ENSGT00940000166348	ENSGT00940000155126.s.b	ENSGT00950000183214.a.b.a.b.f.a.a	ENSGT00940000155270.i.a	ENSGT00940000156160.b.b	ENSGT00530000068353	ENSGT00940000157916	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b ##22	ENSGT00390000013916.g.b	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00940000164964.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00940000181146	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a	ENSGT00950000182895.a.b.v	ENSGT00510000047718.d	ENSGT00950000183009.db.b	ENSGT00940000154913
Cyprininae	ANCESTRAL SPECIES	122	ENSGT00430000031142	ENSGT00940000166348.b	ENSGT00940000155126.s.b.a.b	ENSGT00950000183214.a.b.a.b.f.a.a.a.a	ENSGT00940000155270.i.a.h	ENSGT00940000156160.b.b	ENSGT00940000157916.f	ENSGT00950000183019.f.b.b.c.f.a	ENSGT00940000159069.g.b	ENSGT00530000063873.B	ENSGT00940000156552.c.a.a	ENSGT00940000156089.f.b	ENSGT00390000005159.i #18	ENSGT00940000156444.d.c #19	ENSGT00940000155861.C.f.h #20	ENSGT00940000158239.a.b ##22	ENSGT00390000013916.g.b	ENSGT00950000183046.a.a.fb.c.a	ENSGT00940000156449.a.a	ENSGT00940000164964.b	ENSGT00940000161051.a.a.a.a.a.a	ENSGT00940000154856.A.a.d.b	ENSGT00940000181146	ENSGT00390000005911.m	ENSGT00950000182942.a.b.g.b	ENSGT00940000164909.e.a.a	ENSGT00940000168354.c	ENSGT00510000047718.d.b	ENSGT00950000183009.db.b.c	ENSGT00940000154913.bb.b	ENSGT00940000163412.c
Cyprininae_a	ANCESTRAL SPECIES	95	ENSGT00430000031142	ENSGT00940000166348.b	ENSGT00940000155126.s.b.a.b	ENSGT00950000183214.a.b.a.b.f.a.a.a.a	ENSGT00940000155270.i.a.h	ENSGT00940000156160.b.b	ENSGT00940000157916.f	ENSGT00950000183019.f.b.b.c.f.a	ENSGT00940000159069.g.b	ENSGT00530000063873.B	ENSGT00940000156552.c.a.a	ENSGT00940000156089.f.b	ENSGT00390000005159.i #18	ENSGT00940000156444.d.c #19	ENSGT00940000155861.C.f.h #20	ENSGT00940000158239.a.b ##22	ENSGT00390000013916.g.b	ENSGT00950000183046.a.a.fb.c.a	ENSGT00940000156449.a.a	ENSGT00940000164964.b	ENSGT00940000161051.a.a.a.a.a.a	ENSGT00940000154856.A.a.d.b	ENSGT00940000181146.b	ENSGT00390000005911.m	ENSGT00950000182942.a.b.g.b	ENSGT00940000164909.e.a.a	ENSGT00940000168354.c	ENSGT00510000047718.d.b	ENSGT00950000183009.db.b.c	ENSGT00940000154913.bb.b	ENSGT00940000163412.c
Golden-line barbel	MODERN SPECIES	219							ENSSGRG00000000125	nrp2b (ENSSGRG00000054601)	ABCB6 (ENSSGRG00000054575)	ENSSGRG00000054496	RAPH1 (ENSSGRG00000054491)	abi2a (ENSSGRG00000054354)	tmem237a (ENSSGRG00000054344) #18	ENSSGRG00000054343 #19	ALS2 (ENSSGRG00000054333) #20	fzd7a (ENSSGRG00000054326) ##22	CARF (ENSSGRG00000054325)	fam117bb (ENSSGRG00000054324)	bmpr2b (ENSSGRG00000054319)	ENSSGRG00000054316	ENSSGRG00000054302	ENSSGRG00000054279	ENSSGRG00000054273	ANKZF1 (ENSSGRG00000054272)	glb1l (ENSSGRG00000054217)	ENSSGRG00000054205	pttg1ipb (ENSSGRG00000054202)	sumo3b (ENSSGRG00000054152)	ENSSGRG00000054150	ENSSGRG00000054149	igf2bp2a (ENSSGRG00000053943)
Common carp reference	MODERN SPECIES	46	mnx2a (ENSCCRG00000073003)	ENSCCRG00000068659	ENSCCRG00000064495	fn1a (ENSCCRG00000000854)	ENSCCRG00000060738	nrp2b (ENSCCRG00000077747)	ENSCCRG00000077003	ENSCCRG00000027136	prkag3b (ENSCCRG00000062058)	ENSCCRG00000004252	ENSCCRG00000069803	abi2a (ENSCCRG00000066983)	tmem237a (ENSCCRG00000003941) #18	MPP4 (ENSCCRG00000003914) #19	ALS2 (ENSCCRG00000044930) #20	fzd7a (ENSCCRG00000031157) ##22	ENSCCRG00000031158	ENSCCRG00000077193	fam117bb (ENSCCRG00000057946)	bmpr2b (ENSCCRG00000046124)	ENSCCRG00000008194	ENSCCRG00000008189	ENSCCRG00000008184	ENSCCRG00000008168	glb1l (ENSCCRG00000001579)	ENSCCRG00000028661	ENSCCRG00000058730	ENSCCRG00000005578	tra2b (ENSCCRG00000005547)	igf2bp2a (ENSCCRG00000005568)	tmem41aa (ENSCCRG00000071350)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	49	ENSCARG00000066428	fn1a (ENSCARG00000064711)	ENSCARG00000064592	ENSCARG00000064580	nrp2b (ENSCARG00000063747)	ABCB6 (ENSCARG00000061474)	ENSCARG00000061091	prkag3b (ENSCARG00000060959)	ENSCARG00000059288	ENSCARG00000059106	RAPH1 (ENSCARG00000059025)	abi2a (ENSCARG00000058606)	tmem237a (ENSCARG00000058541) #18	MPP4 (ENSCARG00000058403) #19	ALS2 (ENSCARG00000058302) #20	fzd7a (ENSCARG00000058275) ##22	CARF (ENSCARG00000058221)	fam117bb (ENSCARG00000058201)	bmpr2b (ENSCARG00000058042)	ENSCARG00000057993	ENSCARG00000057935	ENSCARG00000057885	ENSCARG00000057849	ANKZF1 (ENSCARG00000057804)	glb1l (ENSCARG00000056680)	ENSCARG00000055613	ENSCARG00000055538	ENSCARG00000055496	TSPEAR (ENSCARG00000055474)	tra2b (ENSCARG00000055456)	igf2bp2a (ENSCARG00000051497)
Goldfish	MODERN SPECIES	27	naxd (ENSCARG00000016571)	ankrd10b (ENSCARG00000016493)	ing1 (ENSCARG00000016479)	sik1 (ENSCARG00000016420)	cbsb (ENSCARG00000013385)	ENSCARG00000013282	u2af1 (ENSCARG00000013256)	ENSCARG00000013249	ENSCARG00000012833	ENSCARG00000012792	RAPH1 (ENSCARG00000011566)	abi2a (ENSCARG00000011394)	ENSCARG00000011365	ENSCARG00000011349	ALS2 (ENSCARG00000011069) #20	fzd7a (ENSCARG00000011035) ##22	ENSCARG00000011004 #23	fam117bb (ENSCARG00000010989)	bmpr2b (ENSCARG00000010952)	ENSCARG00000010940	ENSCARG00000010930	ENSCARG00000010914	ENSCARG00000010706	ENSCARG00000010617	TSPEAR (ENSCARG00000010578)	tra2b (ENSCARG00000010563)	ENSCARG00000010554	igf2bp2a (ENSCARG00000008723)	tmem41aa (ENSCARG00000008629)	zgc:162707 (ENSCARG00000008624)	nup35 (ENSCARG00000008446)
Zebrafish	MODERN SPECIES	24	ENSDARG00000113678	ABCB6 (ENSDARG00000074254)	ENSDARG00000095580	ENSDARG00000078935	prkag3b (ENSDARG00000000369)	FER1L6 (ENSDARG00000019316)	ENSDARG00000086317	ENSDARG00000078193	ENSDARG00000069978	ENSDARG00000095070	RAPH1 (ENSDARG00000006301)	abi2a (ENSDARG00000058207)	tmem237a (ENSDARG00000041735) #18	MPP4 (ENSDARG00000058222) #19	ALS2 (ENSDARG00000075111) #20	fzd7a (ENSDARG00000060004) ##22	ENSDARG00000019950	fam117bb (ENSDARG00000009839)	bmpr2b (ENSDARG00000020057)	ENSDARG00000020834	ENSDARG00000058409	ENSDARG00000070011	ENSDARG00000095504	glb1l (ENSDARG00000029955)	ENSDARG00000041904	ENSDARG00000074143	pttg1ipb (ENSDARG00000040039)	sumo3b (ENSDARG00000035993)	TSPEAR (ENSDARG00000089235)	tra2b (ENSDARG00000002168)	igf2bp2a (ENSDARG00000003421)
Clupeiformes	ANCESTRAL SPECIES	46	ENSGT00940000157233.c	ENSGT00390000016542	ENSGT00530000064137.a.b	ENSGT00940000158526	ENSGT00940000167649	ENSGT00390000005581.a	ENSGT00390000001225	ENSGT00940000156180.e	ENSGT00500000044939	ENSGT00940000163253.b.c.a.e	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.a.d ##22	ENSGT00940000158239.a.b ##22	ENSGT00860000133854 #23	ENSGT00940000154319 #26	ENSGT00940000153534.A	ENSGT00940000155099.k.b	ENSGT00940000154076.B.b	ENSGT00940000155518.n	ENSGT00940000157526.b	ENSGT00530000063608.B.b	ENSGT00940000163423.C.g.b	ENSGT01030000235214	ENSGT00950000183072.b.b.b	ENSGT00530000063779.A.e.b	ENSGT00940000167474	ENSGT00940000156219.e.b	ENSGT01030000234515.a.a.b.i
Atlantic herring	MODERN SPECIES	11	ENSCHAG00000007209	ENSCHAG00000007259	ENSCHAG00000007274	ENSCHAG00000007289	ENSCHAG00000007361	ENSCHAG00000007381	ENSCHAG00000007415	ENSCHAG00000007426	tmem237a (ENSCHAG00000007436) #18	ENSCHAG00000007489	ENSCHAG00000007517	ENSCHAG00000007531	ENSCHAG00000007592	MPP4 (ENSCHAG00000007617) #19	ALS2 (ENSCHAG00000007686) #20	fzd7a (ENSCHAG00000008651) ##22	ENSCHAG00000008675 #23	SUMO1 (ENSCHAG00000008715) #26	ENSCHAG00000008768	ENSCHAG00000008778	ENSCHAG00000008943	ENSCHAG00000008952	ENSCHAG00000008986	ENSCHAG00000009034	ENSCHAG00000010442	ENSCHAG00000010470	fam117bb (ENSCHAG00000010558)	ENSCHAG00000010577	abi2a (ENSCHAG00000001148)	ENSCHAG00000002493	RAPH1 (ENSCHAG00000002673)
Euteleosteomorpha	ANCESTRAL SPECIES	6								ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00940000176171	ENSGT00500000044939	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000154319 #26	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00980000199010	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b
Acanthomorphata	ANCESTRAL SPECIES	140										ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000154319 #26	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00390000016940.c.b.b	ENSGT00940000155522.g.b	ENSGT00390000003164	ENSGT00940000154095.b.b.a.a	ENSGT00950000183165.b.a.e.b.d.b	ENSGT00950000183165.b.a.e.a	ENSGT00950000182882.A.b.b.f	ENSGT00940000164444.b	ENSGT00390000009940	ENSGT00940000155009.b	ENSGT00940000166110	ENSGT00940000154851.A
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Pinecone sodierfish	MODERN SPECIES	11	adarb1a (ENSMMDG00005013819)	ENSMMDG00005013927	DDRGK1 (ENSMMDG00005014127)	ENSMMDG00005014129	ddx4 (ENSMMDG00005014160)	UBE3A (ENSMMDG00005016321)	CNGA3 (ENSMMDG00005016743)	kpnb3 (ENSMMDG00005016767)	SEMA5B (ENSMMDG00005016835)	CACNB4 (ENSMMDG00005016911)	etv5b (ENSMMDG00005019229)	tmem237b (ENSMMDG00005019232) #18	MPP4 (ENSMMDG00005019240) #19	ALS2 (ENSMMDG00005019353) #20	cdk15 (ENSMMDG00005019730) #21	fzd7a (ENSMMDG00005019732) ##22	ENSMMDG00005019733	ENSMMDG00005019738	ENSMMDG00005019740	clcn4 (ENSMMDG00005019786)	ENSMMDG00005021501	CLASP1 (ENSMMDG00005021516)	ENSMMDG00005021541	INHBB (ENSMMDG00005021550)	RALB (ENSMMDG00005021555)	faimb (ENSMMDG00005021558)	AGAP1 (ENSMMDG00005021582)	gbx2 (ENSMMDG00005022206)	iqca1 (ENSMMDG00005022207)	ACKR3 (ENSMMDG00005022208)	ENSMMDG00005022209
Percomorphaceae	ANCESTRAL SPECIES	22																ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00940000158714.c	ENSGT00530000063564.b.a.a	ENSGT00530000063564.b.b.a	ENSGT00950000183138.a.b.r.a	ENSGT00940000166042.a	ENSGT01090000260051.b.b.dc.a	ENSGT00730000111696.a	ENSGT00940000162403	ENSGT00950000183014.f.a	ENSGT00970000193449	ENSGT00940000166383	ENSGT00530000063715.b
Tiger tail seahorse	MODERN SPECIES	514	ENSHCOG00000002871	SH3YL1 (ENSHCOG00000002866)	ENSHCOG00000002843	ENSHCOG00000002820	lipt1 (ENSHCOG00000002815)	ENSHCOG00000002807	bco1l (ENSHCOG00000002789)	ENSHCOG00000002766	ENSHCOG00000002743	ENSHCOG00000002732	ftcd (ENSHCOG00000002718)	ENSHCOG00000002694	abi3bpb (ENSHCOG00000002686)	ENSHCOG00000002674	cdk15 (ENSHCOG00000002663) #21	fzd7a (ENSHCOG00000002652) ##22	ENSHCOG00000002645	dph3 (ENSHCOG00000002643)	ENSHCOG00000002638	mlpha (ENSHCOG00000002625)	ENSHCOG00000002611	ENSHCOG00000002601	eef1b2 (ENSHCOG00000002591)	ENSHCOG00000002582	arl11 (ENSHCOG00000002573)	cavin2b (ENSHCOG00000002559)	vps16 (ENSHCOG00000002549)	ENSHCOG00000002521	abcc4 (ENSHCOG00000002492)	ENSHCOG00000002451	ENSHCOG00000002443
Percomorphaceae_B	ANCESTRAL SPECIES	22	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235020	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00940000178125	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00940000158714.c	ENSGT00530000063564.b.a.a	ENSGT00530000063564.b.b.a	ENSGT00950000183138.a.b.r.a	ENSGT00940000166042.a	ENSGT01090000260051.b.b.dc.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00940000162403	ENSGT00950000183014.f.a	ENSGT00970000193449	ENSGT00940000166383
Percomorphaceae_C	ANCESTRAL SPECIES	23	ENSGT00390000005914.a	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00940000158714.c	ENSGT00530000063564.b.a.a	ENSGT00530000063564.b.b.a	ENSGT00950000183138.a.b.r.a	ENSGT00940000166042.a	ENSGT01090000260051.b.b.dc.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00940000162403	ENSGT00950000183014.f.a	ENSGT00970000193449	ENSGT00940000166383
Eupercaria	ANCESTRAL SPECIES	23	ENSGT00390000005914.a	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235020	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22
Tetraodontidae	ANCESTRAL SPECIES	26	ENSGT00940000161625.m	ENSGT00940000165423.a.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00950000183184.a.a.b	ENSGT00390000011204	ENSGT00940000164385.a.a.a.b	ENSGT00390000002215.i.b	ENSGT00390000003114.e.b.a	ENSGT00390000007225	ENSGT00940000164897.a.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164908	ENSGT00940000157360.c	ENSGT00950000183165.b.b.b.b	ENSGT00950000183165.a.a.a	ENSGT00390000001718.b	ENSGT00390000004923.C	ENSGT00940000162768.B.b	ENSGT00940000155749.d	ENSGT00510000047334	ENSGT00550000074981	ENSGT00950000183140.a.a	ENSGT00940000155675.p.b	ENSGT00940000165235.a.a	ENSGT00950000183138.a.b.r.a	ENSGT00730000111696.a
Tetraodon	MODERN SPECIES	18	ENSTNIG00000010608	mlpha (ENSTNIG00000010609)	ENSTNIG00000010610	ENSTNIG00000010611	ENSTNIG00000010612	pwp2h (ENSTNIG00000010613)	eed (ENSTNIG00000001661)	ATP7B (ENSTNIG00000010614)	ENSTNIG00000010615	ENSTNIG00000010616	gpd2 (ENSTNIG00000010617)	TUBA4A (ENSTNIG00000010618)	TUBA4A (ENSTNIG00000010619)	inpp4ab (ENSTNIG00000010620)	zgc:113142 (ENSTNIG00000010621)	fzd7a (ENSTNIG00000010622) ##22	cdk15 (ENSTNIG00000010623) #21	ENSTNIG00000000037	gpd1c (ENSTNIG00000010624)	LYPD1 (ENSTNIG00000010625)	pou3f3b (ENSTNIG00000003464)	mrps9 (ENSTNIG00000003463)	ENSTNIG00000017181	ALS2 (ENSTNIG00000017180) #20	ENSTNIG00000000361 #19	cyp20a1 (ENSTNIG00000017178)	ENSTNIG00000017179	cyp20a1 (ENSTNIG00000000941)	abi2b (ENSTNIG00000005932)	ENSTNIG00000017177	ENSTNIG00000017176
Fugu	MODERN SPECIES	20	MPP4 (ENSTRUG00000009863) #19	ALS2 (ENSTRUG00000009974) #20	ENSTRUG00000010321	ENSTRUG00000026898	pou3f3b (ENSTRUG00000030854)	ENSTRUG00000028398	ENSTRUG00000028067	ENSTRUG00000029842	ENSTRUG00000033327	actr3 (ENSTRUG00000010618)	LYPD1 (ENSTRUG00000010883)	gpd1c (ENSTRUG00000010970)	dph3 (ENSTRUG00000011120)	ENSTRUG00000011124	cdk15 (ENSTRUG00000011133) #21	fzd7a (ENSTRUG00000027540) ##22	zgc:113142 (ENSTRUG00000011355)	inpp4ab (ENSTRUG00000011479)	ENSTRUG00000030198	ENSTRUG00000033060	gpd2 (ENSTRUG00000002012)	ENSTRUG00000027802	ENSTRUG00000029949	ENSTRUG00000013604	pwp2h (ENSTRUG00000013258)	ENSTRUG00000013249	ENSTRUG00000032570	ENSTRUG00000011835	mlpha (ENSTRUG00000011756)	cd59 (ENSTRUG00000022452)	ENSTRUG00000031847
Eupecaria_A	ANCESTRAL SPECIES	31	ENSGT00390000005914.a	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235020	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22
Ballan wrasse	MODERN SPECIES	1234													abi3bpb (ENSLBEG00000016143)	ftcd (ENSLBEG00000016039)	cdk15 (ENSLBEG00000015965) #21	fzd7a (ENSLBEG00000015903) ##22	ENSLBEG00000015870
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Eupecaria_C	ANCESTRAL SPECIES	38	ENSGT00940000166383	ENSGT00950000183014.f.a	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00940000156557.g	ENSGT01090000260051.b.b.dc.a	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000158714.c	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00390000007225	ENSGT00940000164897.a.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00390000005581.a	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a	ENSGT00940000157308.h	ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a.i.a	ENSGT00990000204585	ENSGT00940000153737.b.g.a	ENSGT00500000044890.a.a.f	ENSGT00940000156153.y.b	ENSGT00950000183114.a.a	ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000018208	ENSGT00940000177133
Gilthead seabream	MODERN SPECIES	16	ENSSAUG00010026817	ENSSAUG00010026819	mlpha (ENSSAUG00010026821)	ENSSAUG00010026823	trim63a (ENSSAUG00010026825)	ACKR3 (ENSSAUG00010026826)	snx9a (ENSSAUG00010026831)	cd59 (ENSSAUG00010026903)	ENSSAUG00010026905	ENSSAUG00010026906	eef1b2 (ENSSAUG00010026907)	arl11 (ENSSAUG00010026909)	ebpl (ENSSAUG00010026910)	ENSSAUG00010026912	cdk15 (ENSSAUG00010026921) #21	fzd7a (ENSSAUG00010026928) ##22	ENSSAUG00010026936	ENSSAUG00010026940	ENSSAUG00010026942	ENSSAUG00010026948	ENSSAUG00010026950	ENSSAUG00010026952	ENSSAUG00010026955	ftcd (ENSSAUG00010026993)	ENSSAUG00010027053	ENSSAUG00010027056	ENSSAUG00010027058	ENSSAUG00010027060	ENSSAUG00010027063	ENSSAUG00010027064	ENSSAUG00010027065
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	64														ENSGT00940000164897.a.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00390000005581.a	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a	ENSGT00940000157308.h	ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a.i.a	ENSGT00990000204585	ENSGT00940000153737.b.g.a	ENSGT00500000044890.a.a.f	ENSGT00940000156153.y.b	ENSGT00950000183114.a.a	ENSGT00940000166718	ENSGT00940000157133	ENSGT00390000018208	ENSGT00940000177133
European seabass	MODERN SPECIES	15	rgn (ENSDLAG00005031710)	ENSDLAG00005018781	cavin2b (ENSDLAG00005018750)	ENSDLAG00005026337	ENSDLAG00005034876	ENSDLAG00005033366	ENSDLAG00005027997	ENSDLAG00005033577	ENSDLAG00005026503	st6gal2b (ENSDLAG00005002390)	ENSDLAG00005002379	ENSDLAG00005031756	ENSDLAG00005032406	trim63a (ENSDLAG00005028280)	ENSDLAG00005032606 #21	ENSDLAG00005004030 ##22	ENSDLAG00005008212	ENSDLAG00005030134	ENSDLAG00005030361	ENSDLAG00005032015	abi3bpb (ENSDLAG00005015765)	ENSDLAG00005026989	IMPG2 (ENSDLAG00005016077)	senp7b (ENSDLAG00005016086)	ENSDLAG00005033730	ENSDLAG00005028719	ENSDLAG00005003288	ENSDLAG00005003719	ENSDLAG00005012092	ENSDLAG00005012404	ENSDLAG00005027475
Perciformes	ANCESTRAL SPECIES	53														ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000158239.a.b ##22	ENSGT00980000198678	ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a	ENSGT01100000263476.E.b.a.a.b.a.a	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00390000005581.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00950000183014.f.a	ENSGT00940000166383	ENSGT00530000063715.b	ENSGT00950000182910.a.a.d	ENSGT00390000003896	ENSGT00390000014995
Cottioidei	ANCESTRAL SPECIES	49	ENSGT00940000160000	ENSGT00390000001101.f	ENSGT00940000157694	ENSGT00940000154474.B.b	ENSGT00940000154474.B.a	ENSGT00940000154474.A	ENSGT00940000158209	ENSGT00390000005914.a	ENSGT00940000177133	ENSGT00940000157133	ENSGT00950000183114.a.a	ENSGT00940000164059	ENSGT00940000153571.b	ENSGT00940000172021	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00390000005581.a	ENSGT00730000111696.a	ENSGT00950000183014.f.a	ENSGT00940000166383	ENSGT00530000063715.b	ENSGT00950000182910.a.a.d	ENSGT00390000003896	ENSGT00390000014995	ENSGT00940000155515.a.a	ENSGT00390000008812.a.b
Lumpfish	MODERN SPECIES	11	TSPAN7 (ENSCLMG00005013068)	ENSCLMG00005013066	ENSCLMG00005013065	pcid2 (ENSCLMG00005013059)	f10 (ENSCLMG00005013051)	f7i (ENSCLMG00005012966)	f7l (ENSCLMG00005012961)	ENSCLMG00005012948	creg1 (ENSCLMG00005012945)	ENSCLMG00005012943	dnajc27 (ENSCLMG00005012942)	f2 (ENSCLMG00005012301)	fbxo3 (ENSCLMG00005012300)	cdk15 (ENSCLMG00005012298) #21	ENSCLMG00005012296 ##22	FZD7 (ENSCLMG00005012295) ##22	ENSCLMG00005012293	ENSCLMG00005012291	ENSCLMG00005012290	ftcd (ENSCLMG00005012279)	cd59 (ENSCLMG00005012277)	ENSCLMG00005012276	eef1b2 (ENSCLMG00005012274)	ENSCLMG00005012272	arl11 (ENSCLMG00005012270)	ebpl (ENSCLMG00005012249)	ENSCLMG00005012247	ENSCLMG00005012246	vps16 (ENSCLMG00005012176)	rgn (ENSCLMG00005012174)	ENSCLMG00005012043
Stickleback	MODERN SPECIES		SFT2D2 (ENSGACG00000015491)	PCID2 (ENSGACG00000015489)	ENSGACG00000015488	f10 (ENSGACG00000015474)	ENSGACG00000015472	f7 (ENSGACG00000015464)	ENSGACG00000015463	creg1 (ENSGACG00000015462)	dnajc27 (ENSGACG00000015457)	XDH (ENSGACG00000015453)	f2 (ENSGACG00000015448)	fbxo3 (ENSGACG00000015443)	ENSGACG00000015441	ENSGACG00000015433	cdk15 (ENSGACG00000015430) #21	fzd7a (ENSGACG00000015429) ##22	ENSGACG00000015422	ENSGACG00000015420	ftcd (ENSGACG00000015411)	cd59 (ENSGACG00000015409)	ENSGACG00000015406	eef1b2 (ENSGACG00000015402)	arl11 (ENSGACG00000015399)	cavin2b (ENSGACG00000015398)	vps16 (ENSGACG00000015383)	rgn (ENSGACG00000015380)	ENSGACG00000015371	cdk5r2a (ENSGACG00000015367)	ENSGACG00000015364	TAAR1 (ENSGACG00000015361)	ENSGACG00000015358
Perciformes_a	ANCESTRAL SPECIES	46	ENSGT00940000157133	ENSGT00950000183114.a.a	ENSGT00940000164059	ENSGT00940000153571.b	ENSGT00940000175756	ENSGT00940000159969.b.a.b	ENSGT00510000048137	ENSGT00940000154607.a	ENSGT00390000008846	ENSGT00940000163243	ENSGT00950000182913.A.b.a	ENSGT00940000155248.vb.g.b	ENSGT00390000007225	ENSGT00940000159606 #21	ENSGT00940000158239.b #22	ENSGT00940000158239.a.b ##22	ENSGT00980000198678	ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a	ENSGT01100000263476.E.b.a.a.b.a.a	ENSGT00940000157308.h	ENSGT00530000063558.A.c.b	ENSGT00390000005581.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00980000198690.a	ENSGT00950000183014.f.a	ENSGT00940000166383	ENSGT00530000063715.b	ENSGT00950000182910.a.a.d	ENSGT00390000003896	ENSGT00390000014995
Pike perch	MODERN SPECIES	213								lipt1 (ENSSLUG00000006371)	ENSSLUG00000006389	bco1l (ENSSLUG00000006465)	ENSSLUG00000006522	ENSSLUG00000006753	ENSSLUG00000006760	dph3 (ENSSLUG00000006762)	cdk15 (ENSSLUG00000006770) #21	fzd7a (ENSSLUG00000006798) ##22	ENSSLUG00000006914	ENSSLUG00000006922	ENSSLUG00000006933	abi3bpb (ENSSLUG00000006953)	ENSSLUG00000007006	ENSSLUG00000007025	ENSSLUG00000007030	ftcd (ENSSLUG00000007047)	cd59 (ENSSLUG00000007084)	ENSSLUG00000007138	ENSSLUG00000007144	ENSSLUG00000007159	eef1b2 (ENSSLUG00000007163)	arl11 (ENSSLUG00000007173)	ebpl (ENSSLUG00000007179)
Percomorphaceae_D	ANCESTRAL SPECIES	23	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT01030000235020	ENSGT00940000153737.b.g.a	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22
Carangaria	ANCESTRAL SPECIES	30	ENSGT00940000154474.A	ENSGT00940000158209	ENSGT00390000005914.a	ENSGT00390000018208	ENSGT00940000177133	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT01030000235464	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00940000158714.c
Carangaria_A	ANCESTRAL SPECIES	61	ENSGT00940000154474.A	ENSGT00940000158209	ENSGT00390000005914.a	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT01030000235464	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00940000158714.c
Barramundi perch	MODERN SPECIES	897															cdk15 (ENSLCAG00010022773) #21	fzd7a (ENSLCAG00010022784) ##22	ENSLCAG00010022788	ENSLCAG00010022793	ENSLCAG00010022796	ftcd (ENSLCAG00010022816)
Seriola	ANCESTRAL SPECIES	71	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT01030000235241.a.a	ENSGT01030000235241.b	ENSGT01030000235241.a.b	ENSGT00940000153737.b.g.a	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT01030000235464	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00940000158714.c	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.a.a	ENSGT01090000260051.b.b.dc.a	ENSGT00940000154067.c	ENSGT00940000168428.b.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00940000162403	ENSGT00950000183014.f.a	ENSGT00970000193449
Greater amberjack	MODERN SPECIES	152	XDH (ENSSDUG00000003158)	tspan7b (ENSSDUG00000003225)	mid1ip1b (ENSSDUG00000003243)	ENSSDUG00000003259	ENSSDUG00000003277	ENSSDUG00000003292	ENSSDUG00000003303	ENSSDUG00000003316	ENSSDUG00000003330	ENSSDUG00000003394	senp7b (ENSSDUG00000003411)	ENSSDUG00000003441	abi3bpb (ENSSDUG00000003488)	ftcd (ENSSDUG00000003648)	cdk15 (ENSSDUG00000003687) #21	fzd7a (ENSSDUG00000003714) ##22	ENSSDUG00000003717	ENSSDUG00000003722	ENSSDUG00000003746	ST6GAL2 (ENSSDUG00000003809)	trim63a (ENSSDUG00000003824)	mlpha (ENSSDUG00000003860)	ENSSDUG00000003894	ACKR3 (ENSSDUG00000004012)	ENSSDUG00000004020	ENSSDUG00000004082	cd59 (ENSSDUG00000004301)	dytn (ENSSDUG00000004316)	eef1b2 (ENSSDUG00000004353)	ENSSDUG00000004389	arl11 (ENSSDUG00000004422)
Anabantaria	ANCESTRAL SPECIES	96															ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22
Zig-zag eel	MODERN SPECIES	11	ENSMAMG00000026849	ENSMAMG00000022563	ENSMAMG00000024349	ENSMAMG00000022565	ENSMAMG00000026531	ENSMAMG00000022568	ENSMAMG00000022570	ENSMAMG00000022576	ENSMAMG00000022581	ENSMAMG00000022585	ENSMAMG00000022607	ENSMAMG00000022610	ENSMAMG00000022611	ENSMAMG00000022612	ENSMAMG00000022787	ENSMAMG00000022621 ##22	ENSMAMG00000026719	ENSMAMG00000022634	ENSMAMG00000028592	ENSMAMG00000022637	ENSMAMG00000022656	ENSMAMG00000022643	ENSMAMG00000022657	ENSMAMG00000022660	ENSMAMG00000022662	ENSMAMG00000022663	abi3bpb (ENSMAMG00000022665)	ENSMAMG00000022667	ENSMAMG00000022670	ENSMAMG00000022675	ENSMAMG00000022676
Anabantoidei	ANCESTRAL SPECIES	28	ENSGT00940000158209	ENSGT00390000005914.a	ENSGT00390000018208	ENSGT00940000157133	ENSGT00940000166718	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00920000150296	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00390000007225	ENSGT00940000164897.a.b	ENSGT00530000063564.b.b.a	ENSGT00950000183138.a.b.r.a	ENSGT00940000166042.a	ENSGT00940000156557.g	ENSGT00730000111696.a	ENSGT00950000183014.f.a	ENSGT00940000166383	ENSGT00530000063715.b	ENSGT00950000182910.a.a.d	ENSGT00390000003896	ENSGT00390000014995	ENSGT00940000155515.a.a	ENSGT00390000008812.a.b
Siamese fighting fish	MODERN SPECIES	10	f7l (ENSBSLG00000001423)	f10 (ENSBSLG00000001367)	ENSBSLG00000001345	creg1 (ENSBSLG00000001338)	ENSBSLG00000001331	dnajc27 (ENSBSLG00000001286)	tspan7b (ENSBSLG00000010468)	mid1ip1b (ENSBSLG00000010466)	ENSBSLG00000010456	IMPG2 (ENSBSLG00000010443)	ENSBSLG00000010433	ENSBSLG00000010425	abi3bpb (ENSBSLG00000010329)	ENSBSLG00000010309	ftcd (ENSBSLG00000010269)	fzd7a (ENSBSLG00000010253) ##22	dph3 (ENSBSLG00000010249)	ENSBSLG00000010245	ENSBSLG00000010237	ENSBSLG00000010218	mlpha (ENSBSLG00000010198)	trim63a (ENSBSLG00000010195)	ENSBSLG00000010154	eef1b2 (ENSBSLG00000010108)	arl11 (ENSBSLG00000010091)	ebpl (ENSBSLG00000010083)	cavin2b (ENSBSLG00000010062)	vps16 (ENSBSLG00000009992)	rgn (ENSBSLG00000009974)	ENSBSLG00000008009	pomca (ENSBSLG00000007860)
Climbing perch	MODERN SPECIES	11	ENSATEG00000007065	ENSATEG00000007079	rgn (ENSATEG00000007169)	ENSATEG00000007190	ENSATEG00000007199	cavin2b (ENSATEG00000007204)	ENSATEG00000007214	ENSATEG00000007233	ENSATEG00000007276	ENSATEG00000007319	ENSATEG00000007350	ENSATEG00000007628	ENSATEG00000007677	ENSATEG00000007735	ENSATEG00000007873 #21	ENSATEG00000007985 ##22	ENSATEG00000008004	ENSATEG00000008013	ENSATEG00000008021	abi3bpb (ENSATEG00000008126)	ENSATEG00000008265	ENSATEG00000008317	ENSATEG00000025264	ENSATEG00000028807	ENSATEG00000008436	ENSATEG00000030190	ENSATEG00000026958	ENSATEG00000029386	ENSATEG00000029253	ENSATEG00000025524	ENSATEG00000008556
Ovalentaria	ANCESTRAL SPECIES	31	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00940000156557.g	ENSGT01090000260051.b.b.dc.a	ENSGT00940000166042.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000157308.h	ENSGT00940000178125	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000158239.a.a.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225
Atherinomorphae	ANCESTRAL SPECIES	42	ENSGT00950000183014.f.a	ENSGT00970000193449	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00940000156557.g	ENSGT01090000260051.b.b.dc.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000157308.h	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Mangrove rivulus	MODERN SPECIES	994															ENSKMAG00000014266	fzd7a (ENSKMAG00000014304) ##22
Turquoise killifish	MODERN SPECIES	1617	ENSNFUG00015014440	ENSNFUG00015014445	CDH12 (ENSNFUG00015014471)	ENSNFUG00015014669	CDH6 (ENSNFUG00015014689)	ENSNFUG00015015034	ENSNFUG00015015045	CDH6 (ENSNFUG00015015241)	ENSNFUG00015017634	RNASEN (ENSNFUG00015017707)	ENSNFUG00015019368	MC4R (ENSNFUG00015019369)	ENSNFUG00015019370	CDH20 (ENSNFUG00015019382)	RNF152 (ENSNFUG00015019756)	fzd7a (ENSNFUG00015019762) ##22	ENSNFUG00015019763	ENSNFUG00015019764	KBTBD2 (ENSNFUG00015019770)	AVL9 (ENSNFUG00015019795)	lsm5 (ENSNFUG00015019903)	psme2 (ENSNFUG00015019915)	ENSNFUG00015019931	IRF9 (ENSNFUG00015019967)	EMC9 (ENSNFUG00015019978)	ENSNFUG00015019990	TNFSF10 (ENSNFUG00015019995)	ENSNFUG00015020003	MSL2 (ENSNFUG00015020008)	Nfu_g_1_011390 (ENSNFUG00015020016)	ENSNFUG00015020021
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Poeciliinae	ANCESTRAL SPECIES	33	ENSGT00390000005330	ENSGT00530000063174.a.k	ENSGT00940000159370.f	ENSGT00390000008256	ENSGT00950000183163.b	ENSGT00940000166938	ENSGT01030000234614.B.a.b	ENSGT00940000156202.b	ENSGT00940000171984.f	ENSGT00940000153251.a	ENSGT00940000155244.c.c.b.a	ENSGT00940000155244.c.c.b.b	ENSGT00940000159794	ENSGT00940000154641.C.b.h.g.a	ENSGT01050000244843.c.a.a.a.b.b.a.a.b.a	ENSGT00940000158239.a.b ##22	ENSGT01030000234893.b.b	ENSGT00730000111912.A.a	ENSGT01100000263483.A.g.a.d	ENSGT01100000263541.a.b.l.a.d
Poecilia	ANCESTRAL SPECIES	70	ENSGT00940000159116	ENSGT00530000063666.b.eb	ENSGT00950000183121.b.b.b.b.w	ENSGT00390000005330	ENSGT00530000063174.a.k	ENSGT00940000159370.f	ENSGT00390000008256	ENSGT00950000183163.b	ENSGT00940000166938	ENSGT01030000234614.B.a.b	ENSGT00940000171984.f	ENSGT00940000153251.a	ENSGT00940000155244.c.c.b.a	ENSGT00940000155244.c.c.b.b	ENSGT00940000159794	ENSGT00940000158239.a.b ##22	ENSGT01030000234893.b.b	ENSGT00940000154641.C.b.h.g.a	ENSGT01050000244843.c.a.a.a.b.b.a.a.b.a
NAME_6	ANCESTRAL SPECIES	545																ENSGT00940000158239.a.b ##22	ENSGT01030000234893.b.b	ENSGT00940000154641.C.b.h.g.a.c	ENSGT01050000244843.c.a.a.a.b.b.a.a.b.b.a.b
Amazon molly	MODERN SPECIES	982																FZD7 (ENSPFOG00000006226) ##22	ENSPFOG00000006240	ENSPFOG00000006264	ENSPFOG00000006270
Sailfin molly	MODERN SPECIES	2670																ENSPLAG00000002779 ##22	ENSPLAG00000002772	ENSPLAG00000002768	ENSPLAG00000002760	ENSPLAG00000002720	ENSPLAG00000002441
Guppy	MODERN SPECIES	451	pdha1b (ENSPREG00000011312)	ENSPREG00000011343	rps6ka3b (ENSPREG00000011354)	eif1axa (ENSPREG00000011381)	ENSPREG00000011406	ENSPREG00000011428	ENSPREG00000011459	ENSPREG00000011470	cip2a (ENSPREG00000011485)	ENSPREG00000011514	chrnd (ENSPREG00000011542)	ENSPREG00000011584	ENSPREG00000011594	ENSPREG00000011607	ENSPREG00000011625	FZD7 (ENSPREG00000011636) ##22	ENSPREG00000011658	ENSPREG00000011671	ENSPREG00000011684
Platyfish	MODERN SPECIES	13	ENSXMAG00000010229	ENSXMAG00000010235	ENSXMAG00000010252	si:ch73-264p11.1 (ENSXMAG00000010256)	cip2a (ENSXMAG00000022014)	ENSXMAG00000026348	chrnd (ENSXMAG00000022574)	ENSXMAG00000025603	ENSXMAG00000022125	ENSXMAG00000025195	ENSXMAG00000026733	ENSXMAG00000026005	cip2a (ENSXMAG00000022526)	chrnd (ENSXMAG00000025846)	ENSXMAG00000024798	FZD7 (ENSXMAG00000019962) ##22	ENSXMAG00000026978	ENSXMAG00000026397	ENSXMAG00000027572	ENSXMAG00000022518	ENSXMAG00000004729	ENSXMAG00000029075	ENSXMAG00000029479	ENSXMAG00000028177	ENSXMAG00000015260	ENSXMAG00000004733	ENSXMAG00000004734	ENSXMAG00000004739	ENSXMAG00000024484	ENSXMAG00000028938	ENSXMAG00000022891
NAME_4	ANCESTRAL SPECIES																	ENSGT00940000158239.a.b ##22
Mummichog	MODERN SPECIES	789																fzd7a (ENSFHEG00000012401) ##22	ENSFHEG00000012390	ENSFHEG00000012367	ENSFHEG00000012348
Oryzias	ANCESTRAL SPECIES	74	ENSGT00940000155515.a.a	ENSGT00390000014995	ENSGT00390000003896	ENSGT00950000182910.a.a.d	ENSGT00530000063715.b	ENSGT00940000166383	ENSGT00950000183014.f.a	ENSGT00970000193449	ENSGT00940000179271	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT00940000172652	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a	ENSGT00940000178125	ENSGT00940000157308.h
Oryzias_b	ANCESTRAL SPECIES	63					ENSGT00390000003896	ENSGT00950000182910.a.a.d	ENSGT00530000063715.b	ENSGT00940000166383	ENSGT00950000183014.f.a	ENSGT00970000193449	ENSGT00940000179271	ENSGT00730000111696.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.a.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT00940000172652	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a	ENSGT00940000178125	ENSGT00940000157308.h	ENSGT00390000014995	ENSGT00940000155515.a.a	ENSGT00390000008812.a.b	ENSGT01030000235241	ENSGT01030000234765	ENSGT00940000153981.A	ENSGT00940000159196
Indian medaka	MODERN SPECIES	789				vps16 (ENSOMEG00000007502)	cavin2b (ENSOMEG00000007456)	ebpl (ENSOMEG00000007431)	arl11 (ENSOMEG00000007419)	eef1b2 (ENSOMEG00000007375)	ENSOMEG00000007332	ENSOMEG00000007306	ENSOMEG00000007279	mlpha (ENSOMEG00000007229)	ENSOMEG00000007159	ENSOMEG00000007133	cdk15 (ENSOMEG00000007020) #21	fzd7a (ENSOMEG00000006996) ##22	ENSOMEG00000006993	ENSOMEG00000006982	ENSOMEG00000006959	abi3bpb (ENSOMEG00000006910)	ENSOMEG00000006817	ENSOMEG00000006773	senp7b (ENSOMEG00000006756)	rgn (ENSOMEG00000006719)	ENSOMEG00000006681	ENSOMEG00000006608	ENSOMEG00000006583	ENSOMEG00000006572	GPR180 (ENSOMEG00000006528)	ENSOMEG00000006507	ENSOMEG00000006456
Javanese ricefish	MODERN SPECIES	11				ENSOJAG00000000264	vps16 (ENSOJAG00000000203)	cavin2b (ENSOJAG00000000147)	ebpl (ENSOJAG00000000093)	arl11 (ENSOJAG00000000083)	eef1b2 (ENSOJAG00000000060)	ENSOJAG00000009457	ENSOJAG00000009439	mlpha (ENSOJAG00000009418)	ENSOJAG00000009399	ENSOJAG00000009379	cdk15 (ENSOJAG00000009362) #21	fzd7a (ENSOJAG00000009316) ##22	ENSOJAG00000009300	dph3 (ENSOJAG00000009278)	ENSOJAG00000009266	ENSOJAG00000009137	ENSOJAG00000009115	rgn (ENSOJAG00000009097)	MLLT1 (ENSOJAG00000009064)	acsbg2 (ENSOJAG00000007657)	ENSOJAG00000007408	ENSOJAG00000007400	SLC19A1 (ENSOJAG00000007390)	ENSOJAG00000007356	CYP4F8 (ENSOJAG00000007175)	ENSOJAG00000007141	ENSOJAG00000007131
Oryzias_a	ANCESTRAL SPECIES	101		ENSGT00390000008812.a.b	ENSGT00940000155515.a.a	ENSGT00390000014995	ENSGT00390000003896	ENSGT00950000182910.a.a.d	ENSGT00530000063715.b	ENSGT00940000166383	ENSGT00950000183014.f.a	ENSGT00940000162403	ENSGT00730000111696.a	ENSGT00950000183138.a.b.r.a	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00940000172652	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.b	ENSGT00940000157308.h
Chinese medaka	MODERN SPECIES	4972							ENSOSIG00000004579	ebpl (ENSOSIG00000004576)	arl11 (ENSOSIG00000004575)	eef1b2 (ENSOSIG00000004572)	ENSOSIG00000004571	cd59 (ENSOSIG00000004569)	mlpha (ENSOSIG00000004554)	ENSOSIG00000004545	cdk15 (ENSOSIG00000004535) #21	fzd7a (ENSOSIG00000004529) ##22	ENSOSIG00000004527	ENSOSIG00000004525	ENSOSIG00000004516	ENSOSIG00000004513
Japanese Medaka HdrR	MODERN SPECIES	11	ENSORLG00000018917	rgn (ENSORLG00000025381)	vps16 (ENSORLG00000022777)	cavin2b (ENSORLG00000018433)	ebpl (ENSORLG00000018464)	ENSORLG00000028756	eef1b2 (ENSORLG00000018533)	arl11 (ENSORLG00000018486)	ENSORLG00000028428	ENSORLG00000028337	cd59 (ENSORLG00000018558)	mlpha (ENSORLG00000018566)	ENSORLG00000030005	ENSORLG00000026167	cdk15 (ENSORLG00000024266) #21	ENSORLG00000027269 ##22	ENSORLG00000019538	ENSORLG00000027905	ENSORLG00000022597	abi3bpb (ENSORLG00000026438)	ENSORLG00000029143	ENSORLG00000025398	senp7b (ENSORLG00000029608)	ENSORLG00000022476	ENSORLG00000028626	ENSORLG00000022952	GPR180 (ENSORLG00000020452)	ENSORLG00000020450	ENSORLG00000025640	ENSORLG00000022077	ENSORLG00000027711
Ovalentaria_B	ANCESTRAL SPECIES	33	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT00990000204585	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.b	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000158239.a.a.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225
Cichlidae	ANCESTRAL SPECIES	48	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235020	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.b	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b.a	ENSGT00390000007225
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235020	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.b	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169.o	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b.a	ENSGT00390000007225	ENSGT00390000001663.m.a.b	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b	ENSGT00550000074917	ENSGT00940000161734	ENSGT00940000159676.a	ENSGT00940000156299	ENSGT00940000155789	ENSGT01030000234598.a.b	ENSGT00940000153421.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00950000183111.b.a.b	ENSGT00940000157769
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00940000157133	ENSGT00940000166718	ENSGT00950000183114.a.a	ENSGT00940000156153.y.b	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b.g.a	ENSGT01030000235020	ENSGT01030000235241	ENSGT00940000157308.h	ENSGT00530000063503.b	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169.o	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b.a	ENSGT00390000007225	ENSGT00390000001663.m.a.b	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b	ENSGT00550000074917	ENSGT00940000161734	ENSGT00940000159676.a	ENSGT00940000156299	ENSGT00940000155789	ENSGT01030000234598.a.b	ENSGT00940000153421.a.a.a.b	ENSGT00950000183039.B.b.c	ENSGT00950000183111.b.a.b	ENSGT00940000157769
Haplochromini	ANCESTRAL SPECIES	82								ENSGT00940000157308.h.e.b	ENSGT00530000063503.b	ENSGT00940000157308.h.f	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169.o	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b.a	ENSGT00390000007225	ENSGT00390000001663.m.a.b.a	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT01100000263513.a.a.b.b.b.b.b.a.b.a.a.b.a.a.a
Burton s mouthbrooder	MODERN SPECIES	642										ENSHBUG00000022947	senp7b (ENSHBUG00000022938)	ENSHBUG00000022929	abi3bpb (ENSHBUG00000022882)	ftcd (ENSHBUG00000022778)	cdk15 (ENSHBUG00000022723) #21	fzd7a (ENSHBUG00000022691) ##22
Haplochromini_A	ANCESTRAL SPECIES	89							ENSGT00940000157308.h.e.b	ENSGT00530000063503.b	ENSGT00970000193499.a.a.b.a	ENSGT00940000157308.h.f	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169.o	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b.a	ENSGT00390000007225	ENSGT00390000001663.m.a.b.a	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT01100000263513.a.a.b.b.b.b.b.a.b.a.a.b.a.a.a
Haplochromini_B	ANCESTRAL SPECIES	108							ENSGT00940000157308.h.e.b	ENSGT00530000063503.b	ENSGT00970000193499.a.a.b.a	ENSGT00940000157308.h.f	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169.o	ENSGT00390000005581.a	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b.a	ENSGT00390000007225	ENSGT00390000001663.m.a.b.a	ENSGT01100000263502.A.a.a.a.b.a.b	ENSGT00530000063564.b.b.a	ENSGT00530000063564.b.a.a	ENSGT01100000263513.a.a.b.b.b.b.b.a.b.a.a.b.a.a.a
Eastern happy	MODERN SPECIES	14	ENSACLG00000002463	ENSACLG00000002457	ENSACLG00000002451	ENSACLG00000002445	ENSACLG00000002436	ENSACLG00000002433	senp7b (ENSACLG00000002414)	ENSACLG00000002409	ENSACLG00000002401	abi3bpb (ENSACLG00000002308)	ENSACLG00000002292	ENSACLG00000002266	ENSACLG00000002248	ftcd (ENSACLG00000002191)	cdk15 (ENSACLG00000002120) #21	fzd7a (ENSACLG00000002099) ##22	ENSACLG00000001729	ENSACLG00000001726	ENSACLG00000001685	ENSACLG00000001664	ENSACLG00000001625	ENSACLG00000001610	ENSACLG00000001546	ENSACLG00000001533	ENSACLG00000001494	ENSACLG00000001432	ENSACLG00000001417	ENSACLG00000001397	rfc4 (ENSACLG00000001349)	b3gnt5a (ENSACLG00000001344)	ENSACLG00000001304
Zebra mbuna	MODERN SPECIES	1105	ENSMZEG00005013053	ENSMZEG00005013084	ENSMZEG00005013099	ENSMZEG00005013148	gbx2 (ENSMZEG00005013161)	AGAP1 (ENSMZEG00005013181)	ENSMZEG00005013192	ENSMZEG00005013201	ENSMZEG00005013225	senp7b (ENSMZEG00005013233)	ENSMZEG00005013249	abi3bpb (ENSMZEG00005013274)	ENSMZEG00005013651	ftcd (ENSMZEG00005013671)	cdk15 (ENSMZEG00005013700) #21	fzd7a (ENSMZEG00005013710) ##22	ENSMZEG00005013722	dph3 (ENSMZEG00005013794)	ENSMZEG00005013799	ENSMZEG00005013805	ENSMZEG00005013811	ENSMZEG00005013824	ENSMZEG00005013851	ENSMZEG00005013880	ENSMZEG00005013886	ENSMZEG00005013890	ENSMZEG00005013895	ENSMZEG00005013910	ENSMZEG00005013917	ENSMZEG00005013936	ENSMZEG00005013992
P. nyererei	MODERN SPECIES	519							ENSPNYG00000014869	ENSPNYG00000014884	ENSPNYG00000014899	ENSPNYG00000014912	senp7b (ENSPNYG00000014935)	ENSPNYG00000014958	abi3bpb (ENSPNYG00000014990)	ftcd (ENSPNYG00000015018)	cdk15 (ENSPNYG00000015070) #21	fzd7a (ENSPNYG00000015095) ##22	ENSPNYG00000015107	ENSPNYG00000015122	ENSPNYG00000015130	dph3 (ENSPNYG00000015159)	ENSPNYG00000015169	ENSPNYG00000015180	ENSPNYG00000015192	ENSPNYG00000015224	ENSPNYG00000015284	ENSPNYG00000015292	ENSPNYG00000015308
Lyretail cichlid	MODERN SPECIES	376	ENSNBRG00000012911	ENSNBRG00000012889	ENSNBRG00000012874	ENSNBRG00000012847	ENSNBRG00000012813	ENSNBRG00000012794	ENSNBRG00000012778	ENSNBRG00000012765	ENSNBRG00000012758	ENSNBRG00000012731	ENSNBRG00000012622	abi3bpb (ENSNBRG00000012494)	ENSNBRG00000012471	ftcd (ENSNBRG00000012430)	cdk15 (ENSNBRG00000012405) #21	fzd7a (ENSNBRG00000012390) ##22	ENSNBRG00000012374	ENSNBRG00000012361	ENSNBRG00000012349	ENSNBRG00000012280	ENSNBRG00000012263	ENSNBRG00000012248	ENSNBRG00000012124	ENSNBRG00000012090	ENSNBRG00000012084	ENSNBRG00000012040	ENSNBRG00000012019	ENSNBRG00000012010	ENSNBRG00000011989	ENSNBRG00000011949	rfc4 (ENSNBRG00000011864)
Nile tilapia	MODERN SPECIES	14	ENSONIG00000042816	ENSONIG00000035647	ENSONIG00000009414	ENSONIG00000032767	ALOX15B (ENSONIG00000009419)	ENSONIG00000034976	ENSONIG00000036453	ENSONIG00000035824	ENSONIG00000040494	ENSONIG00000035307	ENSONIG00000031634	abi3bpb (ENSONIG00000009393)	ENSONIG00000009392	ftcd (ENSONIG00000009387)	cdk15 (ENSONIG00000009384) #21	fzd7a (ENSONIG00000009380) ##22	ENSONIG00000021458	ENSONIG00000037701	ENSONIG00000030503	ENSONIG00000032116	ENSONIG00000029697	ENSONIG00000034108	ENSONIG00000029173	ENSONIG00000032963	dph3 (ENSONIG00000019171)	ENSONIG00000010737	ENSONIG00000019173	ENSONIG00000019175	ENSONIG00000035486	ENSONIG00000032752	ENSONIG00000037554
Midas cichlid	MODERN SPECIES	655															cdk15 (ENSACIG00000008192) #21	fzd7a (ENSACIG00000008250) ##22	ENSACIG00000008259 ##22	ENSACIG00000008267
Pomacentridae	ANCESTRAL SPECIES	83	ENSGT00390000003896	ENSGT00390000014995	ENSGT00940000155515.a.a	ENSGT00390000008812.a.b	ENSGT00940000153571.b	ENSGT00940000175756	ENSGT00940000159969.b.a.b	ENSGT00510000048137	ENSGT00940000154607.a	ENSGT00390000008846	ENSGT00940000163243	ENSGT00950000182913.A.b.a	ENSGT00940000155248.vb.g.a	ENSGT00940000155248.vb.g.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT01030000235241	ENSGT00970000193706	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT01030000235020	ENSGT00940000160000	ENSGT00390000001101	ENSGT00940000154505.A.c	ENSGT00940000157694	ENSGT00940000154474.B.b	ENSGT00940000154474.B.a
Pomacentridae_A	ANCESTRAL SPECIES	82	ENSGT00390000003896	ENSGT00390000014995	ENSGT00940000155515.a.a	ENSGT00390000008812.a.b	ENSGT00940000153571.b	ENSGT00940000175756	ENSGT00940000159969.b.a.b	ENSGT00510000048137	ENSGT00940000154607.a	ENSGT00390000008846	ENSGT00940000163243	ENSGT00950000182913.A.b.a	ENSGT00940000155248.vb.g.a	ENSGT00940000155248.vb.g.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT01030000235241	ENSGT00970000193706	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000160000	ENSGT00390000001101	ENSGT00940000154505.A.c	ENSGT00940000157694.k.a	ENSGT00940000154474.B.b	ENSGT00940000154474.B.a	ENSGT00940000154474.A
Amphiprion	ANCESTRAL SPECIES	94	ENSGT00390000003896	ENSGT00390000014995	ENSGT00940000155515.a.a	ENSGT00390000008812.a.b	ENSGT00940000153571.b	ENSGT00940000175756	ENSGT00940000159969.b.a.b	ENSGT00510000048137	ENSGT00940000154607.a	ENSGT00390000008846	ENSGT00940000163243	ENSGT00950000182913.A.b.a	ENSGT00940000155248.vb.g.a	ENSGT00940000155248.vb.g.b	ENSGT00940000159606 #21	ENSGT00940000158239.a.b ##22	ENSGT00940000164897.a.b	ENSGT00390000007225	ENSGT01030000235241	ENSGT00970000193706	ENSGT00530000063503.a.a.a	ENSGT00530000063558.A.c.b	ENSGT00940000159169	ENSGT00390000005581.a	ENSGT00940000153737.b.g.a	ENSGT00940000160000	ENSGT00390000001101	ENSGT00940000154505.A.c	ENSGT00940000157694.k.a	ENSGT00940000154474.B.b	ENSGT00940000154474.B.a
Clown anemonefish	MODERN SPECIES	977														ENSAOCG00000015064	cdk15 (ENSAOCG00000014941) #21	fzd7a (ENSAOCG00000014910) ##22	ENSAOCG00000001019	dph3 (ENSAOCG00000014884)	ENSAOCG00000014872	ENSAOCG00000001008	ENSAOCG00000014845
Orange clownfish	MODERN SPECIES	16	rgn (ENSAPEG00000008304)	ENSAPEG00000008331	cdk5r2a (ENSAPEG00000008435)	fbxo3 (ENSAPEG00000008443)	ENSAPEG00000008497	ENSAPEG00000008519	SH3YL1 (ENSAPEG00000008544)	ENSAPEG00000008595	ENSAPEG00000008612	ENSAPEG00000008631	ENSAPEG00000008659	bco1l (ENSAPEG00000008676)	ENSAPEG00000008714	ENSAPEG00000008766	cdk15 (ENSAPEG00000008845) #21	fzd7a (ENSAPEG00000008880) ##22	ENSAPEG00000008908	dph3 (ENSAPEG00000008920)	ENSAPEG00000008938	ENSAPEG00000008966	ENSAPEG00000008979	ENSAPEG00000009029	ENSAPEG00000009042	ENSAPEG00000009058	ENSAPEG00000009080	ENSAPEG00000009113	abi3bpb (ENSAPEG00000009127)	ftcd (ENSAPEG00000009150)	bcor (ENSAPEG00000009196)	ENSAPEG00000009213	pcid2 (ENSAPEG00000009235)
Spiny chromis	MODERN SPECIES	1837															ENSAPOG00000021101	fzd7a (ENSAPOG00000021035) ##22	ENSAPOG00000021025	dph3 (ENSAPOG00000021002)	ENSAPOG00000020991	ENSAPOG00000020962
Bicolor damselfish	MODERN SPECIES	1185							ENSSPAG00000000781	cd59 (ENSSPAG00000000754)	ACKR3 (ENSSPAG00000000724)	ENSSPAG00000000704	mlpha (ENSSPAG00000000650)	trim63a (ENSSPAG00000000615)	ST6GAL2 (ENSSPAG00000000589)	ECRG4 (ENSSPAG00000000578)	cdk15 (ENSSPAG00000000483) #21	fzd7a (ENSSPAG00000000437) ##22	ENSSPAG00000000429	ENSSPAG00000000416	ENSSPAG00000000405	ENSSPAG00000000394	ENSSPAG00000000346	ENSSPAG00000000334	ftcd (ENSSPAG00000000224)	ENSSPAG00000017536	ENSSPAG00000017511	pcid2 (ENSSPAG00000017498)	prozb (ENSSPAG00000017476)	f10 (ENSSPAG00000017436)	f7 (ENSSPAG00000017368)	f7l (ENSSPAG00000017344)
Cod	MODERN SPECIES	20	ENSGMOG00000004793	ENSGMOG00000012012	ENSGMOG00000016958	ENSGMOG00000005007	ENSGMOG00000024166	ENSGMOG00000034267	ENSGMOG00000025859	ENSGMOG00000037070	ENSGMOG00000033405	DGKZ (ENSGMOG00000011532)	ENSGMOG00000004842	ENSGMOG00000024906	ENSGMOG00000036749	CHRM4 (ENSGMOG00000001144)	ENSGMOG00000027928	ENSGMOG00000022687 ##22	ENSGMOG00000025812	ENSGMOG00000036573	ENSGMOG00000005902 #26	ENSGMOG00000006961	ENSGMOG00000006957	ENSGMOG00000035449	ENSGMOG00000005700	ENSGMOG00000005046	ENSGMOG00000024095	ALS2 (ENSGMOG00000007250) #20	ENSGMOG00000002312 #19	ENSGMOG00000026893	tmem237b (ENSGMOG00000002511) #18	abi2b (ENSGMOG00000029004)	ENSGMOG00000034307
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	27	ENSGT00940000155984.i.a.b	ENSGT00940000159862.b	ENSGT00940000159213.q.b	ENSGT00940000154817.b.b.b.p	ENSGT00940000158265	ENSGT00940000164897.a.b	ENSGT00390000005717.s	ENSGT00940000155212.ab.a	ENSGT00950000183115.b.a.m.b	ENSGT00940000156089.e.a	ENSGT00500000044939	ENSGT00390000005159.j #18	ENSGT00940000156444.c #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606 #21	ENSGT00940000158239.a.b.e ##22	ENSGT00940000154319 #26	ENSGT00940000156884	ENSGT00950000182905.a.a.a.a.a.b	ENSGT00390000016940.c.b.b	ENSGT00940000155522.g.b	ENSGT00940000156082.a.b	ENSGT01100000263555.a.a.a	ENSGT01050000244842.a.b.b.a.a.b	ENSGT01050000244842.a.b.b.a.a.a	ENSGT00530000063836.a	ENSGT00940000155359.w.b	ENSGT00940000157230.b	ENSGT00940000155655.A	ENSGT00940000155773.a	ENSGT00940000178373
Salmoninae	ANCESTRAL SPECIES	124	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000156089.e.a.e.a	ENSGT00500000044939.j	ENSGT00390000005159.j.a.a.a #18	ENSGT00940000156444.c.c.a #19	ENSGT00940000164897.a.b.d	ENSGT00390000005717.s.g	ENSGT00940000155212.ab.a.l	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000156089.e.a.e.b	ENSGT00500000044939.i	ENSGT00390000005159.j.b #18	ENSGT00940000156444.c.c.b #19	ENSGT00940000155861.C.e #20	ENSGT00940000159606.d #21	ENSGT00940000158239.a.b.e ##22	ENSGT00940000154319.e.b #26	ENSGT00940000156884.d	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00940000154319.e.a #26	ENSGT00940000156884.c	ENSGT00950000182905.a.a.a.a.a.b.a	ENSGT00390000016940.c.b.b.c	ENSGT00940000155522.g.b.g	ENSGT00940000156082.a.b.f.b	ENSGT01100000263555.a.a.a.b.b	ENSGT00940000156082.a.b.e	ENSGT01100000263555.a.a.a.a	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT00530000063836.a.m
Huchen	DUPLICATION
Huchen	MODERN SPECIES	13	ENSHHUG00000028750	INHBB (ENSHHUG00000028744)	GLI2 (ENSHHUG00000028740)	ENSHHUG00000027867	clcn4 (ENSHHUG00000027548)	ENSHHUG00000027544	ENSHHUG00000027542	SHROOM2 (ENSHHUG00000027533)	itm2ba (ENSHHUG00000027526)	abi2b (ENSHHUG00000027445)	cyp20a1 (ENSHHUG00000027367)	tmem237b (ENSHHUG00000027343) #18	MPP4 (ENSHHUG00000027332) #19	ALS2 (ENSHHUG00000027311) #20	cdk15 (ENSHHUG00000027292) #21	FZD7 (ENSHHUG00000027283) ##22	SUMO1 (ENSHHUG00000027271) #26	MAP3K2 (ENSHHUG00000027257)	ENSHHUG00000027239	tmem198b (ENSHHUG00000027235)	desmb (ENSHHUG00000027036)	RBMS1 (ENSHHUG00000026744)	ITGB6 (ENSHHUG00000026717)	ENSHHUG00000026695	ENSHHUG00000026686	ENSHHUG00000026669	LY75 (ENSHHUG00000026647)	MARCHF7 (ENSHHUG00000026635)	ENSHHUG00000026576	wdsub1 (ENSHHUG00000026564)	ENSHHUG00000026385
Huchen	MODERN SPECIES	1666															cdk15 (ENSHHUG00000047244) #21	FZD7 (ENSHHUG00000047232) ##22	sumo1 (ENSHHUG00000047188) #26	ENSHHUG00000047169	ENSHHUG00000047148	tmem198b (ENSHHUG00000047146)	desmb (ENSHHUG00000046806)	RBMS1 (ENSHHUG00000046617)	ITGB6 (ENSHHUG00000046568)	PLA2R1 (ENSHHUG00000046561)	ENSHHUG00000046554	LY75 (ENSHHUG00000046522)	MARCHF7 (ENSHHUG00000046518)
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00940000157211.k.c	ENSGT00940000155984.i.a.b.b	ENSGT00940000159862.b.e	ENSGT00940000159213.q.b	ENSGT00940000154817.b.b.b.p.d.a.b	ENSGT00940000158265	ENSGT00940000164897.a.b.c	ENSGT00390000005717.s.h	ENSGT00940000155212.ab.a.k	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000156089.e.a.e.a	ENSGT00390000005159.j.a.a.a #18	ENSGT00940000156444.c.c.a #19	ENSGT00940000155861.C.e.c #20	ENSGT00940000159606.c #21	ENSGT00940000158239.a.b.e ##22	ENSGT00940000154319.e.b #26	ENSGT00940000156884.d	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00940000155522.g.b.h	ENSGT00940000156082.a.b.f.a	ENSGT01100000263555.a.a.a.b.a	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT00940000164897.a.b.d	ENSGT00390000005717.s.g	ENSGT00940000155212.ab.a.l	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000156089.e.a.e.b	ENSGT00500000044939.i	ENSGT00390000005159.j.a.a.b #18	ENSGT00500000044939.j
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	49	ENSGT00940000160235.h	ENSGT00940000154817.b.b.b.p.d.b	ENSGT00940000158265.w	ENSGT00940000164897.a.b.d	ENSGT00390000005717.s.g	ENSGT00940000155212.ab.a.l	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000156089.e.a.e.b	ENSGT00500000044939.i	ENSGT00390000005159.j.b #18	ENSGT00940000156444.c.d #19	ENSGT00390000005159.j.a.a.b #18	ENSGT00940000156444.c.c.b #19	ENSGT00940000155861.C.e.d #20	ENSGT00940000159606.d.a #21	ENSGT00940000158239.a.b.e.c ##22	ENSGT00940000154319.e.a #26	ENSGT00940000156884.c	ENSGT00950000182905.a.a.a.a.a.b.a.a	ENSGT00390000016940.c.b.b.c.c.b	ENSGT00940000155522.g.b.h	ENSGT00940000156082.a.b.f.a	ENSGT01100000263555.a.a.a.a.b	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT00530000063836.a.m	ENSGT00940000155359.w.b.ab	ENSGT00940000157230.b.c	ENSGT00940000155655.A.a	ENSGT00940000155773.a.f	ENSGT00390000014376.c.b.c.a
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00940000159862.b.f	ENSGT00940000160235.h	ENSGT00940000154817.b.b.b.p.d.b	ENSGT00940000158265.w	ENSGT00940000164897.a.b.d	ENSGT00390000005717.s.g	ENSGT00940000155212.ab.a.l	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000156089.e.a.e.b	ENSGT00500000044939.i	ENSGT00390000005159.j.b #18	ENSGT00940000156444.c.d #19	ENSGT00940000156444.c.c.b #19	ENSGT00940000155861.C.e.d #20	ENSGT00940000159606.d.a #21	ENSGT00940000158239.a.b.e.c ##22	ENSGT00940000154319.e.a #26	ENSGT00940000156884.c	ENSGT00950000182905.a.a.a.a.a.b.a.a	ENSGT00390000016940.c.b.b.c.c.b	ENSGT00940000155522.g.b.h	ENSGT01050000245843.B	ENSGT00390000016940.c.b.b.d	ENSGT00390000016940.c.b.b.c.c.a	ENSGT00940000155522.g.b.g	ENSGT00940000156082.a.b.e	ENSGT00940000156082.a.b.f.a	ENSGT01100000263555.a.a.a.a.b	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT00530000063836.a.m
Coho salmon	MODERN SPECIES	7	ENSOKIG00005050940	ENSOKIG00005050941	CLASP1 (ENSOKIG00005050943)	clcn4 (ENSOKIG00005050952)	ENSOKIG00005050963	ENSOKIG00005050964	SHROOM2 (ENSOKIG00005050965)	itm2ba (ENSOKIG00005050967)	abi2b (ENSOKIG00005050970)	cyp20a1 (ENSOKIG00005050972)	tmem237b (ENSOKIG00005050973) #18	ENSOKIG00005050975 #19	ENSOKIG00005050976	ALS2 (ENSOKIG00005050977) #20	cdk15 (ENSOKIG00005050978) #21	FZD7 (ENSOKIG00005004258) ##22	sumo1 (ENSOKIG00005004303) #26	ENSOKIG00005004425	ENSOKIG00005004835	TMEM198 (ENSOKIG00005004876)	DES (ENSOKIG00005004884)	ENSOKIG00005004896	RBMS1 (ENSOKIG00005004919)	ITGB6 (ENSOKIG00005004992)	PLA2R1 (ENSOKIG00005005196)	LY75 (ENSOKIG00005005291)	MARCHF7 (ENSOKIG00005005647)	BAZ2B (ENSOKIG00005005998)	wdsub1 (ENSOKIG00005010604)	ENSOKIG00005010653	ENSOKIG00005011293
Chinook salmon	MODERN SPECIES	5	ptpn4b (ENSOTSG00005034435)	RALB (ENSOTSG00005034434)	INHBB (ENSOTSG00005034431)	ENSOTSG00005034427	CLASP1 (ENSOTSG00005033552)	clcn4 (ENSOTSG00005033380)	ENSOTSG00005033379	ENSOTSG00005033378	SHROOM2 (ENSOTSG00005028334)	itm2ba (ENSOTSG00005028333)	abi2b (ENSOTSG00005028163)	cyp20a1 (ENSOTSG00005027892)	MPP4 (ENSOTSG00005027889) #19	ALS2 (ENSOTSG00005027880) #20	ENSOTSG00005027863	FZD7 (ENSOTSG00005027861) ##22	SUMO1 (ENSOTSG00005027856) #26	ENSOTSG00005027720	ENSOTSG00005027709	tmem198b (ENSOTSG00005027705)	RBMS1 (ENSOTSG00005027698)	ITGB6 (ENSOTSG00005026590)	PLA2R1 (ENSOTSG00005026587)	LY75 (ENSOTSG00005026586)	MARCHF7 (ENSOTSG00005026584)	BAZ2B (ENSOTSG00005024893)	wdsub1 (ENSOTSG00005024883)	ENSOTSG00005024882	ENSOTSG00005021932	ENSOTSG00005017803	si:dkey-276j7.1 (ENSOTSG00005017796)
Rainbow trout	MODERN SPECIES	9	INHBB (ENSOMYG00000072155)	ENSOMYG00000056576	ENSOMYG00000019264	CLASP1 (ENSOMYG00000018219)	clcn4 (ENSOMYG00000014387)	ENSOMYG00000014113	ENSOMYG00000014100	SHROOM2 (ENSOMYG00000014082)	itm2ba (ENSOMYG00000014040)	abi2b (ENSOMYG00000014053)	cyp20a1 (ENSOMYG00000013637)	tmem237b (ENSOMYG00000013566) #18	MPP4 (ENSOMYG00000013417) #19	ALS2 (ENSOMYG00000013245) #20	cdk15 (ENSOMYG00000013180) #21	FZD7 (ENSOMYG00000013168) ##22	sumo1 (ENSOMYG00000013139) #26	ENSOMYG00000013052	ENSOMYG00000012043	ENSOMYG00000012986	ENSOMYG00000012967	ENSOMYG00000012958	RBMS1 (ENSOMYG00000012941)	ITGB6 (ENSOMYG00000012738)	PLA2R1 (ENSOMYG00000012671)	LY75 (ENSOMYG00000012337)	MARCHF7 (ENSOMYG00000012255)	ENSOMYG00000020458	BAZ2B (ENSOMYG00000008254)	ENSOMYG00000063465	wdsub1 (ENSOMYG00000006311)
Oncorhynchus	ANCESTRAL SPECIES	43	ENSGT00940000155984.i.a.b.b	ENSGT00940000159862.b.e	ENSGT00940000159213.q.b	ENSGT00940000154817.b.b.b.p.d.a.b	ENSGT00940000158265.x	ENSGT00940000164897.a.b.c	ENSGT00390000005717.s.h	ENSGT00940000155212.ab.a.k	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000156089.e.a.e.a	ENSGT00500000044939.j	ENSGT00390000005159.j.a.a.a #18	ENSGT00940000156444.c.c.a #19	ENSGT00940000155861.C.e.c #20	ENSGT00940000159606.d.b #21	ENSGT00940000158239.a.b.e.d ##22	ENSGT00940000154319.e.b #26	ENSGT00940000156884.d	ENSGT00950000182905.a.a.a.a.a.b.a.b	ENSGT00390000016940.c.b.b.d	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00390000016940.c.b.b.c.c.a	ENSGT00940000155522.g.b.g	ENSGT00940000156082.a.b.e	ENSGT00940000156082.a.b.f.b	ENSGT01100000263555.a.a.a.a.a	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT01050000244842.a.b.b.a.a.a.k	ENSGT00530000063836.a.n	ENSGT00940000155359.w.b.`b	ENSGT00940000157230.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	322															ENSGT00940000159606.c #21	ENSGT00940000158239.a.b.e.d ##22	ENSGT00940000154319.e.b #26	ENSGT00940000156884.d	ENSGT00950000182905.a.a.a.a.a.b.a.b	ENSGT00390000016940.c.b.b.c.d
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	31	ENSOTSG00005028303	ENSOTSG00005028295	INHBB (ENSOTSG00005028293)	GLI2 (ENSOTSG00005028275)	CLASP1 (ENSOTSG00005023535)	clcn4 (ENSOTSG00005015838)	ENSOTSG00005015800	ENSOTSG00005015799	SHROOM2 (ENSOTSG00005015798)	itm2ba (ENSOTSG00005015797)	abi2b (ENSOTSG00005015541)	tmem237b (ENSOTSG00005015534) #18	MPP4 (ENSOTSG00005015331) #19	ALS2 (ENSOTSG00005014642) #20	cdk15 (ENSOTSG00005014592) #21	FZD7 (ENSOTSG00005014591) ##22	sumo1 (ENSOTSG00005014584) #26	ENSOTSG00005014582	ENSOTSG00005014579	tmem198b (ENSOTSG00005014578)	desmb (ENSOTSG00005014435)	ENSOTSG00005014428	LY75 (ENSOTSG00005014258)	ENSOTSG00005014254	ENSOTSG00005014251	ENSOTSG00005014250	ENSOTSG00005014249	ENSOTSG00005012386	si:dkey-276j7.1 (ENSOTSG00005012380)	fhl2b (ENSOTSG00005012379)	dph3 (ENSOTSG00005012378)
Chinook salmon	MODERN SPECIES	31	ENSOTSG00005002321	INHBB (ENSOTSG00005002325)	gli2b (ENSOTSG00005002348)	CLASP1 (ENSOTSG00005002456)	clcn4 (ENSOTSG00005004077)	ENSOTSG00005007961	ENSOTSG00005007962	SHROOM2 (ENSOTSG00005007963)	itm2ba (ENSOTSG00005007965)	abi2b (ENSOTSG00005007966)	cyp20a1 (ENSOTSG00005008044)	tmem237b (ENSOTSG00005008046) #18	MPP4 (ENSOTSG00005008057) #19	ALS2 (ENSOTSG00005008889) #20	cdk15 (ENSOTSG00005009163) #21	FZD7 (ENSOTSG00005009171) ##22	sumo1 (ENSOTSG00005009174) #26	MAP3K2 (ENSOTSG00005009181)	ENSOTSG00005010299	tmem198b (ENSOTSG00005010303)	desmb (ENSOTSG00005010307)	ENSOTSG00005010472	sema3ab (ENSOTSG00005010487)	sema3d (ENSOTSG00005011945)	grm3 (ENSOTSG00005012042)	ENSOTSG00005012045	fam107b (ENSOTSG00005012047)	C1QL2 (ENSOTSG00005012048)	en1b (ENSOTSG00005012050)	ENSOTSG00005012055	ENSOTSG00005012065
Coho salmon	MODERN SPECIES	25	INHBB (ENSOKIG00005046030)	ENSOKIG00005045961	CLASP1 (ENSOKIG00005043085)	clcn4 (ENSOKIG00005041364)	ENSOKIG00005041256	ENSOKIG00005041241	SHROOM2 (ENSOKIG00005041211)	ENSOKIG00005041000	CYP20A1 (ENSOKIG00005040611)	tmem237b (ENSOKIG00005040561) #18	itm2ba (ENSOKIG00005040503)	MPP4 (ENSOKIG00005039734) #19	ENSOKIG00005039681	ALS2 (ENSOKIG00005038534) #20	cdk15 (ENSOKIG00005038410) #21	FZD7 (ENSOKIG00005038385) ##22	sumo1 (ENSOKIG00005038335) #26	MAP3K2 (ENSOKIG00005037763)	ENSOKIG00005037735	tmem198b (ENSOKIG00005037706)	desmb (ENSOKIG00005037516)	RBMS1 (ENSOKIG00005037356)	ITGB6 (ENSOKIG00005036724)	LY75 (ENSOKIG00005035673)	MARCHF7 (ENSOKIG00005035561)	BAZ2B (ENSOKIG00005034120)	wdsub1 (ENSOKIG00005033986)	ENSOKIG00005033164	ENSOKIG00005031531	si:dkey-276j7.1 (ENSOKIG00005031470)	fhl2b (ENSOKIG00005031455)
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000020491	ENSOMYG00000020483	ENSOMYG00000020433	ENSOMYG00000019724	clcn4 (ENSOMYG00000019302)	ENSOMYG00000019108	ENSOMYG00000019101	SHROOM2 (ENSOMYG00000019092)	abi2b (ENSOMYG00000018986)	cyp20a1 (ENSOMYG00000018865)	tmem237b (ENSOMYG00000018836) #18	MPP4 (ENSOMYG00000017951) #19	ENSOMYG00000017890	ALS2 (ENSOMYG00000017007) #20	cdk15 (ENSOMYG00000016483) #21	FZD7 (ENSOMYG00000016464) ##22	sumo1 (ENSOMYG00000016398) #26	ENSOMYG00000015706	ENSOMYG00000015669	ENSOMYG00000015648	ENSOMYG00000015622	RBMS1 (ENSOMYG00000074127)	ITGB6 (ENSOMYG00000015516)	PLA2R1 (ENSOMYG00000015452)	LY75 (ENSOMYG00000015093)	MARCHF7 (ENSOMYG00000014938)	BAZ2B (ENSOMYG00000014839)	ENSOMYG00000014439	ENSOMYG00000014288	si:dkey-276j7.1 (ENSOMYG00000014260)	fhl2b (ENSOMYG00000014240)
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	41	ENSGT00940000155984.i.a.b.b	ENSGT00940000159862.b.e	ENSGT00940000155925.k	ENSGT00940000154817.b.b.b.p.d.a.a.a.b	ENSGT00940000158265.v	ENSGT00940000164897.a.b.c.d	ENSGT00390000005717.s.h	ENSGT00940000155212.ab.a.k	ENSGT00950000183115.b.a.m.b.c	ENSGT00940000156089.e.a.e.a	ENSGT00500000044939.j.a	ENSGT00390000005159.j.a.b #18	ENSGT00940000156444.c.c.a #19	ENSGT00940000155861.C.e.c #20	ENSGT00940000159606.c #21	ENSGT00940000158239.a.b.e.e ##22	ENSGT00940000154319.e.a #26	ENSGT00940000156884.c.a	ENSGT00950000182905.a.a.a.a.a.b.a	ENSGT00390000016940.c.b.b.c	ENSGT00940000155522.g.b.g	ENSGT00940000156082.a.b.f.a	ENSGT01100000263555.a.a.a.b.a	ENSGT01050000244842.a.b.b.a.a.b.c.b	ENSGT01050000244842.a.b.b.a.a.a.k	ENSGT00530000063836.a.n	ENSGT00940000155359.w.b.`b	ENSGT00940000157230.b.d	ENSGT00940000155655.A.b	ENSGT00940000155773.a.e	ENSGT00390000014376.c.b.d.a
River trout	MODERN SPECIES	32	INHBB (ENSSTUG00000048291)	ENSSTUG00000048266	CLASP1 (ENSSTUG00000048061)	clcn4 (ENSSTUG00000047114)	ENSSTUG00000047030	ENSSTUG00000047027	SHROOM2 (ENSSTUG00000047015)	itm2ba (ENSSTUG00000047005)	abi2b (ENSSTUG00000046952)	cyp20a1 (ENSSTUG00000046939)	tmem237b (ENSSTUG00000046920) #18	MPP4 (ENSSTUG00000046490) #19	ENSSTUG00000046467	ALS2 (ENSSTUG00000046283) #20	cdk15 (ENSSTUG00000046252) #21	FZD7 (ENSSTUG00000046239) ##22	sumo1 (ENSSTUG00000046224) #26	MAP3K2 (ENSSTUG00000046159)	ENSSTUG00000046105	tmem198b (ENSSTUG00000046088)	desmb (ENSSTUG00000046040)	RBMS1 (ENSSTUG00000045714)	ITGB6 (ENSSTUG00000044643)	PLA2R1 (ENSSTUG00000044514)	LY75 (ENSSTUG00000043896)	MARCHF7 (ENSSTUG00000043848)	BAZ2B (ENSSTUG00000042862)	wdsub1 (ENSSTUG00000042703)	ENSSTUG00000042294	ENSSTUG00000041755	si:dkey-276j7.1 (ENSSTUG00000041692)
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000109853	ENSSSAG00000088525	ENSSSAG00000063636	ENSSSAG00000063989	CLCN4 (ENSSSAG00000076737)	ENSSSAG00000122046	ENSSSAG00000046061	SHROOM2 (ENSSSAG00000076946)	ITM2B (ENSSSAG00000076952)	ENSSSAG00000076958	cyp20a1 (ENSSSAG00000076973)	tmem237b (ENSSSAG00000076979) #18	MPP4 (ENSSSAG00000076985) #19	ALS2 (ENSSSAG00000077078) #20	cdk15 (ENSSSAG00000077326) #21	FZD7 (ENSSSAG00000090681) ##22	sumo1 (ENSSSAG00000039756) #26	ENSSSAG00000104661	ENSSSAG00000040860	ENSSSAG00000108130	ENSSSAG00000041137	RBMS1 (ENSSSAG00000041329)	ITGB6 (ENSSSAG00000046328)	PLA2R1 (ENSSSAG00000047360)	LY75 (ENSSSAG00000047429)	MARCHF7 (ENSSSAG00000048377)	BAZ2B (ENSSSAG00000048495)	ENSSSAG00000050476	ENSSSAG00000050347	ENSSSAG00000053659	si:dkey-276j7.1 (ENSSSAG00000066600)
Salmo	ANCESTRAL SPECIES	48	ENSGT00940000155984.i.a.b.a	ENSGT00940000159862.b.f	ENSGT00940000160235.h	ENSGT00940000154817.b.b.b.p.d.a.a.a.a	ENSGT00940000158265.u	ENSGT00940000164897.a.b.c.c	ENSGT00390000005717.s.g	ENSGT00940000155212.ab.a.l	ENSGT00950000183115.b.a.m.b.d	ENSGT00940000156089.e.a.e.b	ENSGT00500000044939.j.b	ENSGT00390000005159.j.b #18	ENSGT00940000156444.c.c.b #19	ENSGT00940000155861.C.e.d #20	ENSGT00940000159606.d #21	ENSGT00940000158239.a.b.e.f ##22	ENSGT00940000154319.e.b #26	ENSGT00940000156884.d	ENSGT00950000182905.a.a.a.a.a.b.b	ENSGT00940000155522.g.b.h	ENSGT01050000245843.B	ENSGT00940000156082.a.b.f.b	ENSGT01100000263555.a.a.a.b.b	ENSGT01050000244842.a.b.b.a.a.b.c.a	ENSGT01050000244842.a.b.b.a.a.a.l	ENSGT00530000063836.a.m	ENSGT00940000155359.w.b.ab	ENSGT00940000157230.b.c	ENSGT00940000155655.A.a	ENSGT00940000155773.a.f	ENSGT00390000014376.c.b.d.b
Atlantic salmon	MODERN SPECIES	7	ralbb (ENSSSAG00000078039)	INHBB (ENSSSAG00000095753)	ENSSSAG00000006063	ENSSSAG00000006583	ENSSSAG00000041231	ENSSSAG00000112669	ENSSSAG00000046072	itm2ba (ENSSSAG00000046077)	ENSSSAG00000046090	cyp20a1 (ENSSSAG00000046176)	tmem237b (ENSSSAG00000046359) #18	MPP4 (ENSSSAG00000046379) #19	ALS2 (ENSSSAG00000046554) #20	cdk15 (ENSSSAG00000047111) #21	ENSSSAG00000089522	FZD7 (ENSSSAG00000088178) ##22	sumo1 (ENSSSAG00000047369) #26	ENSSSAG00000099696	ENSSSAG00000047678	ENSSSAG00000047730	ENSSSAG00000091174	RBMS1 (ENSSSAG00000047854)	ITGB6 (ENSSSAG00000048382)	PLA2R1 (ENSSSAG00000052320)	LY75 (ENSSSAG00000052417)	MARCHF7 (ENSSSAG00000052840)	BAZ2B (ENSSSAG00000053120)	ENSSSAG00000065378	wdsub1 (ENSSSAG00000065348)	ENSSSAG00000066245	si:dkey-276j7.1 (ENSSSAG00000054284)
River trout	MODERN SPECIES	36	INHBB (ENSSTUG00000001135)	ENSSTUG00000001189	CLASP1 (ENSSTUG00000001621)	clcn4 (ENSSTUG00000003597)	ENSSTUG00000004284	ENSSTUG00000004295	ENSSTUG00000004306	ENSSTUG00000004321	itm2ba (ENSSTUG00000004330)	abi2b (ENSSTUG00000004354)	cyp20a1 (ENSSTUG00000004438)	tmem237b (ENSSTUG00000004528) #18	MPP4 (ENSSTUG00000004575) #19	ALS2 (ENSSTUG00000004634) #20	cdk15 (ENSSTUG00000004847) #21	FZD7 (ENSSTUG00000004884) ##22	sumo1 (ENSSTUG00000004889) #26	ENSSTUG00000004927	ENSSTUG00000005029	tmem198b (ENSSTUG00000005264)	desmb (ENSSTUG00000005285)	ENSSTUG00000005445	ENSSTUG00000005451	RBMS1 (ENSSTUG00000005466)	ITGB6 (ENSSTUG00000005572)	PLA2R1 (ENSSTUG00000006248)	LY75 (ENSSTUG00000006346)	MARCHF7 (ENSSTUG00000006800)	BAZ2B (ENSSTUG00000006981)	wdsub1 (ENSSTUG00000012268)	ENSSTUG00000012281
Northern pike	MODERN SPECIES	21	RALB (ENSELUG00000017597)	INHBB (ENSELUG00000031359)	gli2b (ENSELUG00000017638)	CLASP1 (ENSELUG00000000708)	clcn4 (ENSELUG00000017771)	ENSELUG00000017731	ENSELUG00000017798	SHROOM2 (ENSELUG00000017883)	itm2ba (ENSELUG00000017924)	abi2b (ENSELUG00000018242)	cyp20a1 (ENSELUG00000018269)	tmem237b (ENSELUG00000018312) #18	MPP4 (ENSELUG00000018414) #19	ALS2 (ENSELUG00000018653) #20	cdk15 (ENSELUG00000018693) #21	FZD7 (ENSELUG00000018707) ##22	sumo1 (ENSELUG00000018738) #26	MAP3K2 (ENSELUG00000018797)	ENSELUG00000028571	ENSELUG00000018822	tmem198b (ENSELUG00000018835)	desmb (ENSELUG00000018874)	RBMS1 (ENSELUG00000018923)	ITGB6 (ENSELUG00000018949)	PLA2R1 (ENSELUG00000019037)	LY75 (ENSELUG00000019195)	marchf7 (ENSELUG00000019222)	ENSELUG00000026157	ENSELUG00000019577	ENSELUG00000031041	ENSELUG00000027393
Protacanthopterygii	ANCESTRAL SPECIES	99	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00940000160059.a.b.b	ENSGT00430000031142	ENSGT00940000155126.s.b	ENSGT00940000166348	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00940000156160.b.b	ENSGT00940000159069	ENSGT00530000063873.B	ENSGT00940000156552.c.a	ENSGT00940000156089.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b.f ##22	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT00980000199010	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00390000004977.d.a	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00950000183009.db.b	ENSGT00940000154913.p.a
Salmoninae	ANCESTRAL SPECIES	304												ENSGT00940000156552.c.a.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b.f ##22	ENSGT00940000154319.f #26	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a.c	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00940000164909.e.a	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000163412.b	ENSGT00940000157516	ENSGT00390000006618
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000166954.a	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00940000160059.a.b.b.a	ENSGT00940000166348	ENSGT00940000160059.a.b.b.b	ENSGT00430000031142	ENSGT00940000155126.s.b	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B.h	ENSGT00940000178309.b	ENSGT00940000156552.c.a.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b.f ##22	ENSGT00940000154319.f #26	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a.c.b	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00940000164909.e.a.n	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000163412.b	ENSGT00940000157516	ENSGT00390000006618
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00390000016940.c.b.a.c	ENSGT00940000155522.g.a.l	ENSGT00940000154095.b.b.a.b.d	ENSGT00940000166954.a	ENSGT00950000183165.b.a.e.b.d.a.b.a.a	ENSGT00940000160059.a.b.b.b	ENSGT00430000031142	ENSGT00940000155126.s.b	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B.h	ENSGT00940000156552.c.a.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b.f ##22	ENSGT00940000154319.f #26	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000163412.b	ENSGT00940000157516.h	ENSGT00390000006618	ENSGT00390000010672	ENSGT00940000158179.a	ENSGT00940000156083.j
Rainbow trout	MODERN SPECIES	14	ENSOMYG00000068788	ENSOMYG00000051588	ENSOMYG00000053842	ENSOMYG00000049740	ENSOMYG00000064801	ENSOMYG00000073741	cd28 (ENSOMYG00000037183)	ENSOMYG00000074658	ENSOMYG00000054664	tmem237a (ENSOMYG00000057264) #18	ENSOMYG00000037209	MPP4 (ENSOMYG00000037216) #19	ENSOMYG00000048007	ENSOMYG00000049289	ALS2 (ENSOMYG00000070422) #20	fzd7a (ENSOMYG00000026160) ##22	sumo-1 (ENSOMYG00000025363) #26	ENSOMYG00000058730	ENSOMYG00000056170	ENSOMYG00000056834	ENSOMYG00000076869	ENSOMYG00000049726	fam117bb (ENSOMYG00000056573)	ENSOMYG00000073277	ENSOMYG00000063219	bmpr2b (ENSOMYG00000049256)	ENSOMYG00000074538	TSPEAR (ENSOMYG00000037235)	ENSOMYG00000058894	SUMO3 (ENSOMYG00000037253)	ENSOMYG00000077747
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00940000155522.g.a.l	ENSGT00940000154095.b.b.a.b.d	ENSGT00940000166954.a	ENSGT00950000183165.b.a.e.b.d.a.b.a.a	ENSGT00950000183165.b.a.e.b.d.a.b.b	ENSGT00940000160059.a.b.b.b	ENSGT00430000031142	ENSGT00940000155126.s.b	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B.h	ENSGT00940000156552.c.a.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b.f ##22	ENSGT00940000154319.f #26	ENSGT00390000013916	ENSGT00510000047718.d	ENSGT00940000158193
Chinook salmon	MODERN SPECIES	944																fzd7a (ENSOTSG00005027559) ##22	ENSOTSG00005027555	ENSOTSG00005027546
Coho salmon	MODERN SPECIES	18	ENSOKIG00005038799	ENSOKIG00005038816	ENSOKIG00005038825	ENSOKIG00005038858	ENSOKIG00005038873	NRP2 (ENSOKIG00005038900)	ENSOKIG00005039446	ENSOKIG00005039472	prkag3b (ENSOKIG00005039500)	FER1L6 (ENSOKIG00005039679)	ENSOKIG00005039897	RAPH1 (ENSOKIG00005039928)	tmem237a (ENSOKIG00005040010) #18	MPP4 (ENSOKIG00005040094) #19	ALS2 (ENSOKIG00005040413) #20	fzd7a (ENSOKIG00005041315) ##22	ENSOKIG00005041343	SUMO1 (ENSOKIG00005041379) #26	ENSOKIG00005041403	ENSOKIG00005041440	bmpr2b (ENSOKIG00005041479)	ENSOKIG00005041664	TSPEAR (ENSOKIG00005041677)	ube2g2 (ENSOKIG00005041702)	sumo3b (ENSOKIG00005041723)	ENSOKIG00005041828	ENSOKIG00005042720	glb1l (ENSOKIG00005042882)	ENSOKIG00005044402	ENSOKIG00005044414	ENSOKIG00005044419
Salmo	ANCESTRAL SPECIES	10	ENSGT00950000182882.A.b.b.e.d	ENSGT00390000016940.c.b.a.c	ENSGT00940000155522.g.a.l	ENSGT00940000154095.b.b.a.b.d	ENSGT00940000166954.a	ENSGT00940000160059.a.b.b.b	ENSGT00430000031142	ENSGT00940000155126.s.b	ENSGT00950000183019.f.b.b.c	ENSGT00940000159069	ENSGT00530000063873.B.h	ENSGT00940000156552.c.a.f	ENSGT00390000005159.i #18	ENSGT00940000156444.d #19	ENSGT00940000155861.C.f #20	ENSGT00940000158239.a.b.f ##22	ENSGT00940000154319.f #26	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a.c.b	ENSGT00510000047718.d	ENSGT00940000158193	ENSGT00950000182895.a.b.u.b	ENSGT00940000164909.e.a.n	ENSGT00950000182942.a.b	ENSGT00390000005911	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000163412.b	ENSGT00940000157516	ENSGT00390000006618.j
River trout	MODERN SPECIES	12	ENSSTUG00000022478	fn1a (ENSSTUG00000020383)	ENSSTUG00000020254	ENSSTUG00000020249	prkag3b (ENSSTUG00000020228)	ENSSTUG00000020217	FER1L6 (ENSSTUG00000019137)	ENSSTUG00000019087	ENSSTUG00000019081	RAPH1 (ENSSTUG00000019063)	tmem237a (ENSSTUG00000019047) #18	ENSSTUG00000019043	MPP4 (ENSSTUG00000019030) #19	ENSSTUG00000019024	ALS2 (ENSSTUG00000017918) #20	fzd7a (ENSSTUG00000017867) ##22	SUMO1 (ENSSTUG00000017856) #26	ENSSTUG00000017831	ENSSTUG00000017818	fam117bb (ENSSTUG00000017805)	ENSSTUG00000017786	bmpr2b (ENSSTUG00000031391)	ENSSTUG00000031374	TSPEAR (ENSSTUG00000031340)	ube2g2 (ENSSTUG00000031336)	ENSSTUG00000031323	ENSSTUG00000029245	glb1l (ENSSTUG00000025743)	ENSSTUG00000025607	ENSSTUG00000025599	ENSSTUG00000025585
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000116935	ENSSSAG00000080865	ENSSSAG00000080872	ENSSSAG00000089367	ENSSSAG00000009945	ENSSSAG00000105675	ENSSSAG00000114673	ENSSSAG00000092198	ENSSSAG00000080894	ENSSSAG00000080914	ENSSSAG00000091966	ENSSSAG00000049766	ENSSSAG00000096274	ENSSSAG00000088870	ENSSSAG00000050144 #20	ENSSSAG00000050171 ##22	ENSSSAG00000050202	ENSSSAG00000117001	ENSSSAG00000105259	TSPEAR (ENSSSAG00000050067)	ube2g2 (ENSSSAG00000051507)	SUMO3 (ENSSSAG00000084800)	ENSSSAG00000120441	ENSSSAG00000002802	ENSSSAG00000064688	ENSSSAG00000050303	ENSSSAG00000021713	ENSSSAG00000098086	glb1l (ENSSSAG00000051577)	ENSSSAG00000052812	ENSSSAG00000005556
Huchen	MODERN SPECIES	6336																fzd7a (ENSHHUG00000023518) ##22	ENSHHUG00000023414 #26
Northern pike	MODERN SPECIES	19	ABCB6 (ENSELUG00000000885)	FER1L6 (ENSELUG00000011484)	ENSELUG00000011439	RAPH1 (ENSELUG00000011416)	ENSELUG00000028952	ENSELUG00000029145	ABI2 (ENSELUG00000011377)	tmem237a (ENSELUG00000011359) #18	ENSELUG00000011343 #19	ENSELUG00000011387	ENSELUG00000027269	ENSELUG00000026273	ALS2 (ENSELUG00000011306) #20	ENSELUG00000011283	ENSELUG00000011231	fzd7a (ENSELUG00000011210) ##22	ENSELUG00000029802	ENSELUG00000033217 #26	ENSELUG00000011133	fam117bb (ENSELUG00000011120)	bmpr2b (ENSELUG00000000389)	ENSELUG00000034671	TSPEAR (ENSELUG00000011087)	ube2g2 (ENSELUG00000011061)	sumo3b (ENSELUG00000011027)	ENSELUG00000011005	ENSELUG00000010966	glb1l (ENSELUG00000010822)	ANKZF1 (ENSELUG00000010785)	ENSELUG00000010749	ENSELUG00000010731
Elephant shark	MODERN SPECIES	1501	ENSCMIG00000005441	ENSCMIG00000005484	trpm2 (ENSCMIG00000005586)	ENSCMIG00000005654	ENSCMIG00000005661	ADPRH (ENSCMIG00000005664)	raph1b (ENSCMIG00000005688)	abi2b (ENSCMIG00000005732)	cyp20a1 (ENSCMIG00000005758)	tmem237a (ENSCMIG00000005771) #18	ENSCMIG00000005775	MPP4 (ENSCMIG00000005794) #19	ENSCMIG00000005827	ALS2 (ENSCMIG00000005882) #20	cdk15 (ENSCMIG00000005961) #21	fzd7a (ENSCMIG00000005971) #22	sumo1 (ENSCMIG00000005980) #26	ENSCMIG00000005993	adarb1a (ENSCMIG00000006012)	pofut2 (ENSCMIG00000006150)	ube2g2 (ENSCMIG00000006228)	TSPEAR (ENSCMIG00000006236)	ENSCMIG00000006243	ITGB2 (ENSCMIG00000006532)	DIP2A (ENSCMIG00000007758)	ugt1b5 (ENSCMIG00000008939)	ENSCMIG00000008940	ENSCMIG00000008945	ENSCMIG00000008947	ENSCMIG00000008949	prl (ENSCMIG00000008952)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000158239 #22
Lamprey	MODERN SPECIES	226													NKIRAS2 (ENSPMAG00000002116)	ENSPMAG00000002111	ENSPMAG00000002109	fzd7a (ENSPMAG00000009984) #22	ENSPMAG00000002108	SLC4A7 (ENSPMAG00000002081)
Hagfish	MODERN SPECIES	1055	ENSEBUG00000014794	ENSEBUG00000017033	ENSEBUG00000007459	BTD (ENSEBUG00000003564)	ENSEBUG00000013945	ENSEBUG00000004072	adat3 (ENSEBUG00000007217)	osgepl1 (ENSEBUG00000014775)	med24 (ENSEBUG00000015052)	MFSD6 (ENSEBUG00000002186)	ENSEBUG00000003428	KCTD18 (ENSEBUG00000007716)	ENSEBUG00000002323	ENSEBUG00000010548	ENSEBUG00000016864	fzd7a (ENSEBUG00000004249) #22	ENSEBUG00000000676	fastk (ENSEBUG00000004770)	nkiras2 (ENSEBUG00000014268)	ENSEBUG00000005474	ENSEBUG00000007530	ENSEBUG00000009892	ENSEBUG00000002613	ENSEBUG00000016147	ENSEBUG00000001271	ENSEBUG00000011184	ENSEBUG00000012756	snf8 (ENSEBUG00000008786)	ENSEBUG00000015718	ENSEBUG00000007527	ENSEBUG00000015959