Sarcopterygii	ANCESTRAL SPECIES	21	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00390000015889	ENSGT00610000087446	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a	ENSGT00940000155352	ENSGT00640000091574	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00940000163723.A	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b
Tetrapoda	ANCESTRAL SPECIES	9	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Amniota	ANCESTRAL SPECIES	20	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153216.a.a.d	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b
Mammalia	ANCESTRAL SPECIES	9	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Theria	ANCESTRAL SPECIES	8	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00530000063074.b.a	ENSGT00940000159533	ENSGT00940000158651	ENSGT00940000155663	ENSGT00950000183093.B	ENSGT00390000008184	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l.a	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267.db.b #34	ENSGT00940000166205.b ##35	ENSGT00940000166205.a.e #35	ENSGT00940000156267.db.a #36	ENSGT00940000167380	ENSGT00940000167952
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l.a	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267.db.b #34	ENSGT00940000166205.a.e #35	ENSGT00940000156267.db.a #36	ENSGT00940000156267.eb #37	ENSGT00940000167952	ENSGT00940000167380
Sperm whale	MODERN SPECIES	7	MRVI1 (ENSPCTG00005008830) #7	ENSPCTG00005009229 #8	CTR9 (ENSPCTG00005009276) #9	ENSPCTG00005009350 #10	ZBED5 (ENSPCTG00005009433) #11	GALNT18 (ENSPCTG00005009456) #12	ENSPCTG00005009485 #13	USP47 (ENSPCTG00005009618) #14	DKK3 (ENSPCTG00005010287) #15	ENSPCTG00005010334 #16	ENSPCTG00005010379 #17	MICAL2 (ENSPCTG00005010521) #18	PARVA (ENSPCTG00005010894) #19	ENSPCTG00005011111 #20	RASSF10 (ENSPCTG00005011126) #21	ARNTL (ENSPCTG00005011154) #22	BTBD10 (ENSPCTG00005011536) #23	PTH (ENSPCTG00005011723) #24	FAR1 (ENSPCTG00005011756) #25	SPON1 (ENSPCTG00005011836) #26	RRAS2 (ENSPCTG00005012007) #27	COPB1 (ENSPCTG00005012104) #28	PSMA1 (ENSPCTG00005012167) #29	PDE3B (ENSPCTG00005012346) #30	ENSPCTG00005012691 #31	ENSPCTG00005012726 #32	CYP2R1 (ENSPCTG00005012742) #33	ENSPCTG00005012814 #34	ENSPCTG00005012901 #35	ENSPCTG00005012923 #36	ENSPCTG00005012995 #37
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l.a	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267.db.b #34	ENSGT00940000166205.a.e #35	ENSGT00940000156267.db.a #36	ENSGT00940000156267.eb #37	ENSGT00940000167952	ENSGT00940000167380
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00940000154429.w.b ##8	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00390000018433.s.b ##17	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l.a	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00950000182922.a.a.a.b.a.b.a.b.a	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.cb #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000153169.A.b.b.a.a.a.b.l	ENSGT00390000000378.d.b.gb ##32	ENSGT00940000158305 #33	ENSGT00940000156267.db.b #34	ENSGT00940000166205.a.e #35	ENSGT00940000156267.db.a #36
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00940000154429.w.b ##8	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00390000018433.s.b ##17	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l.a	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00950000182922.a.a.a.b.a.b.a.b.a	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.cb #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000153169.A.b.b.a.a.a.b.l	ENSGT00390000000378.d.b.gb ##32	ENSGT00940000158305 #33	ENSGT00940000156267.db.b #34	ENSGT00940000166205.a.e #35	ENSGT00940000167952
Beluga whale	MODERN SPECIES	32	RNF141 (ENSDLEG00000006404)	LYVE1 (ENSDLEG00000006396)	IRAG1 (ENSDLEG00000006375) #7	CTR9 (ENSDLEG00000006355) #9	EIF4G2 (ENSDLEG00000006290) #10	ZBED5 (ENSDLEG00000006273) #11	ENSDLEG00000006268	GALNT18 (ENSDLEG00000006263) #12	USP47 (ENSDLEG00000006227) #14	DKK3 (ENSDLEG00000006216) #15	ENSDLEG00000006212	MICAL2 (ENSDLEG00000006015) #18	PARVA (ENSDLEG00000005943) #19	TEAD1 (ENSDLEG00000005889)	RASSF10 (ENSDLEG00000005856) #21	ARNTL (ENSDLEG00000005839) #22	BTBD10 (ENSDLEG00000005823) #23	PTH (ENSDLEG00000005808) #24	ENSDLEG00000005799	FAR1 (ENSDLEG00000005790) #25	SPON1 (ENSDLEG00000005782) #26	RRAS2 (ENSDLEG00000005779) #27	COPB1 (ENSDLEG00000005761) #28	PSMA1 (ENSDLEG00000005746) #29	ENSDLEG00000005736	ENSDLEG00000005733 #32	PDE3B (ENSDLEG00000005717) #30	CYP2R1 (ENSDLEG00000005681) #33	ENSDLEG00000005674 #34	ENSDLEG00000005668 #35	ENSDLEG00000005660
Narwhal	MODERN SPECIES	314	IRAG1 (ENSMMNG00015019550) #7	ENSMMNG00015019676 ##8	CTR9 (ENSMMNG00015019690) #9	EIF4G2 (ENSMMNG00015019778) #10	ZBED5 (ENSMMNG00015019924) #11	GALNT18 (ENSMMNG00015019950) #12	ENSMMNG00015019981	ENSMMNG00015020000	USP47 (ENSMMNG00015020112) #14	DKK3 (ENSMMNG00015020327) #15	ENSMMNG00015020342 ##17	MICAL2 (ENSMMNG00015020388) #18	PARVA (ENSMMNG00015020501) #19	TEAD1 (ENSMMNG00015020545)	RASSF10 (ENSMMNG00015020589) #21	BMAL1 (ENSMMNG00015020613) #22	BTBD10 (ENSMMNG00015020698) #23	PTH (ENSMMNG00015020742) #24	ENSMMNG00015020752	FAR1 (ENSMMNG00015020761) #25	SPON1 (ENSMMNG00015020782) #26	ENSMMNG00015020802 #27	COPB1 (ENSMMNG00015020824) #28	PSMA1 (ENSMMNG00015020868) #29	PDE3B (ENSMMNG00015020953) #30	ENSMMNG00015021034	ENSMMNG00015021043 ##32	CYP2R1 (ENSMMNG00015021059) #33	ENSMMNG00015021083 #34	ENSMMNG00015021104 #35	ENSMMNG00015021119
Vaquita	MODERN SPECIES	19	LYVE1 (ENSPSNG00000017631)	IRAG1 (ENSPSNG00000004067) #7	ENSPSNG00000004144 ##8	CTR9 (ENSPSNG00000004180) #9	EIF4G2 (ENSPSNG00000004235) #10	ZBED5 (ENSPSNG00000004281) #11	GALNT18 (ENSPSNG00000004318) #12	ENSPSNG00000004358	USP47 (ENSPSNG00000004502) #14	DKK3 (ENSPSNG00000004657) #15	ENSPSNG00000004681 ##17	MICAL2 (ENSPSNG00000004843) #18	PARVA (ENSPSNG00000005015) #19	ENSPSNG00000005077	RASSF10 (ENSPSNG00000005115) #21	BMAL1 (ENSPSNG00000005165) #22	BTBD10 (ENSPSNG00000005248) #23	PTH (ENSPSNG00000005298) #24	ENSPSNG00000005319	FAR1 (ENSPSNG00000005352) #25	SPON1 (ENSPSNG00000005398) #26	ENSPSNG00000005427 #27	COPB1 (ENSPSNG00000005475) #28	PSMA1 (ENSPSNG00000005548) #29	PDE3B (ENSPSNG00000005620) #30	ENSPSNG00000005706	ENSPSNG00000005725 ##32	CYP2R1 (ENSPSNG00000005748) #33	ENSPSNG00000005789 #34	ENSPSNG00000005826 #35	ENSPSNG00000005847 #36
Dolphin	MODERN SPECIES	4020																BMAL1 (ENSTTRG00000013925) #22	BTBD10 (ENSTTRG00000013943) #23
Blue whale	MODERN SPECIES	19	RNF141 (ENSBMSG00010009211)	LYVE1 (ENSBMSG00010009230)	IRAG1 (ENSBMSG00010009276) #7	CTR9 (ENSBMSG00010009543) #9	ENSBMSG00010009584 #10	GALNT18 (ENSBMSG00010009633) #12	ENSBMSG00010009639 ##13	ENSBMSG00010009644	USP47 (ENSBMSG00010009711) #14	ENSBMSG00010009966 #15	MICAL2 (ENSBMSG00010010014) #18	PARVA (ENSBMSG00010010228) #19	ENSBMSG00010010279	ENSBMSG00010010477	RASSF10 (ENSBMSG00010010479) #21	BMAL1 (ENSBMSG00010010519) #22	BTBD10 (ENSBMSG00010010941) #23	PTH (ENSBMSG00010010969) #24	FAR1 (ENSBMSG00010010996) #25	ENSBMSG00010011043	SPON1 (ENSBMSG00010011058) #26	RRAS2 (ENSBMSG00010011072) #27	COPB1 (ENSBMSG00010011087) #28	PSMA1 (ENSBMSG00010011110) #29	PDE3B (ENSBMSG00010011135) #30	ENSBMSG00010011179	ENSBMSG00010011189	CYP2R1 (ENSBMSG00010011195) #33	ENSBMSG00010011210 ##35	ENSBMSG00010011225 #35	ENSBMSG00010011235 ##35
Pecora	ANCESTRAL SPECIES	7	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B
Percora_a	ANCESTRAL SPECIES	6	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B
Bovidae	ANCESTRAL SPECIES	6	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B
Bovinae	ANCESTRAL SPECIES	21	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00940000160670.d	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B
Bos	ANCESTRAL SPECIES	20	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00940000160670.d	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a.c.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511
Bos_b	ANCESTRAL SPECIES	19	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00940000160670.d	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00390000011740.t	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a.c.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511
Cow	MODERN SPECIES	6	LYVE1 (ENSBTAG00000000802)	IRAG1 (ENSBTAG00000007129) #7	ENSBTAG00000038174	CTR9 (ENSBTAG00000015566) #9	EIF4G2 (ENSBTAG00000020308) #10	ZBED5 (ENSBTAG00000010568) #11	ENSBTAG00000027716	GALNT18 (ENSBTAG00000002914) #12	ENSBTAG00000049052	USP47 (ENSBTAG00000010919) #14	DKK3 (ENSBTAG00000004275) #15	MICAL2 (ENSBTAG00000014855) #18	PARVA (ENSBTAG00000000700) #19	TEAD1 (ENSBTAG00000032657)	RASSF10 (ENSBTAG00000011914) #21	ARNTL (ENSBTAG00000013029) #22	BTBD10 (ENSBTAG00000013033) #23	PTH (ENSBTAG00000019080) #24	FAR1 (ENSBTAG00000009061) #25	SPON1 (ENSBTAG00000009150) #26	RRAS2 (ENSBTAG00000011905) #27	ENSBTAG00000009359	COPB1 (ENSBTAG00000006556) #28	PSMA1 (ENSBTAG00000006564) #29	PDE3B (ENSBTAG00000005218) #30	CYP2R1 (ENSBTAG00000010419) #33	ENSBTAG00000048777 ##35	CALCB (ENSBTAG00000001516) #35	CALCA (ENSBTAG00000010089) #37	CALCB (ENSBTAG00000047380)	INSC (ENSBTAG00000032782)
Hybrid Bos Indicus	MODERN SPECIES	6	ENSBIXG00005016296	AMPD3 (ENSBIXG00005016202)	RNF141 (ENSBIXG00005002561)	LYVE1 (ENSBIXG00005016090)	IRAG1 (ENSBIXG00005016021) #7	CTR9 (ENSBIXG00005015596) #9	EIF4G2 (ENSBIXG00005015557) #10	ENSBIXG00005015507	GALNT18 (ENSBIXG00005015461) #12	USP47 (ENSBIXG00005015320) #14	DKK3 (ENSBIXG00005015200) #15	MICAL2 (ENSBIXG00005015056) #18	PARVA (ENSBIXG00005014842) #19	TEAD1 (ENSBIXG00005014750)	RASSF10 (ENSBIXG00005006224) #21	BMAL1 (ENSBIXG00005014420) #22	BTBD10 (ENSBIXG00005007269) #23	PTH (ENSBIXG00005014186) #24	FAR1 (ENSBIXG00005014143) #25	SPON1 (ENSBIXG00005001819) #26	RRAS2 (ENSBIXG00005014006) #27	ENSBIXG00005007265	COPB1 (ENSBIXG00005013907) #28	PSMA1 (ENSBIXG00005001733) #29	PDE3B (ENSBIXG00005013773) #30	CYP2R1 (ENSBIXG00005013677) #33	ENSBIXG00005000258 ##35	ENSBIXG00005013598 #35	ENSBIXG00005006728 #37	ENSBIXG00005001650	INSC (ENSBIXG00005013489)
Bos_a	ANCESTRAL SPECIES	15	ENSGT00950000183011.c.a.b.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a.c.b #35	ENSGT00390000001511	ENSGT00940000156267 #37	ENSGT00940000167380
Domestic yak	MODERN SPECIES	4	ADM (ENSBGRG00000004160)	AMPD3 (ENSBGRG00000004237)	RNF141 (ENSBGRG00000004425)	ENSBGRG00000004453	IRAG1 (ENSBGRG00000004494) #7	CTR9 (ENSBGRG00000004932) #9	EIF4G2 (ENSBGRG00000005087) #10	ZBED5 (ENSBGRG00000005325) #11	GALNT18 (ENSBGRG00000005345) #12	USP47 (ENSBGRG00000005464) #14	DKK3 (ENSBGRG00000005751) #15	MICAL2 (ENSBGRG00000005834) #18	ENSBGRG00000006072	PARVA (ENSBGRG00000006152) #19	RASSF10 (ENSBGRG00000006408) #21	BMAL1 (ENSBGRG00000006454) #22	BTBD10 (ENSBGRG00000006660) #23	PTH (ENSBGRG00000006795) #24	ENSBGRG00000006818	ENSBGRG00000006837	FAR1 (ENSBGRG00000006854) #25	SPON1 (ENSBGRG00000006912) #26	RRAS2 (ENSBGRG00000007061) #27	ENSBGRG00000007156	COPB1 (ENSBGRG00000007177) #28	PSMA1 (ENSBGRG00000007331) #29	PDE3B (ENSBGRG00000007548) #30	ENSBGRG00000007979	CYP2R1 (ENSBGRG00000008015) #33	ENSBGRG00000008172 ##35	ENSBGRG00000008208 #35
Wild yak	MODERN SPECIES	59								GALNT18 (ENSBMUG00000009846) #12	USP47 (ENSBMUG00000009781) #14	DKK3 (ENSBMUG00000009715) #15	MICAL2 (ENSBMUG00000009680) #18	ENSBMUG00000009615	PARVA (ENSBMUG00000009601) #19	TEAD1 (ENSBMUG00000009561)	RASSF10 (ENSBMUG00000009509) #21	BMAL1 (ENSBMUG00000009463) #22	BTBD10 (ENSBMUG00000009414) #23	PTH (ENSBMUG00000009375) #24
American bison	MODERN SPECIES	3365					S100G (ENSBBBG00000013834)	SYAP1 (ENSBBBG00000013849)	ENSBBBG00000013863	ENSBBBG00000002993	USP47 (ENSBBBG00000014036) #14	DKK3 (ENSBBBG00000014092) #15	MICAL2 (ENSBBBG00000014118) #18	ENSBBBG00000003182	PARVA (ENSBBBG00000008327) #19	TEAD1 (ENSBBBG00000014216)	RASSF10 (ENSBBBG00000003229) #21	BMAL1 (ENSBBBG00000014351) #22	BTBD10 (ENSBBBG00000014389) #23	PTH (ENSBBBG00000003306) #24	FAR1 (ENSBBBG00000014419) #25	SPON1 (ENSBBBG00000014458) #26	RRAS2 (ENSBBBG00000003357) #27	ENSBBBG00000014492	COPB1 (ENSBBBG00000014540) #28	PSMA1 (ENSBBBG00000014567) #29	PDE3B (ENSBBBG00000014623) #30	ENSBBBG00000014655 #33	ENSBBBG00000014736 ##35	ENSBBBG00000007170 #35	ENSBBBG00000003643 #37	ENSBBBG00000014818 #37	INSC (ENSBBBG00000001200)
Caprinae	ANCESTRAL SPECIES	6	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00950000183010.a.a.a.b.a.a.a.a.a	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.b ##35	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511
Rambouillet Sheep	MODERN SPECIES	6	ADM (ENSOARG00020016612)	AMPD3 (ENSOARG00020016234)	RNF141 (ENSOARG00020016151)	ENSOARG00020016111	IRAG1 (ENSOARG00020014539) #7	CTR9 (ENSOARG00020014257) #9	EIF4G2 (ENSOARG00020014062) #10	ZBED5 (ENSOARG00020014031) #11	GALNT18 (ENSOARG00020013870) #12	USP47 (ENSOARG00020012457) #14	DKK3 (ENSOARG00020012153) #15	MICAL2 (ENSOARG00020011978) #18	PARVA (ENSOARG00020011875) #19	TEAD1 (ENSOARG00020011068)	RASSF10 (ENSOARG00020010999) #21	arntl (ENSOARG00020009923) #22	BTBD10 (ENSOARG00020009686) #23	ENSOARG00020009652	PTH (ENSOARG00020009626) #24	FAR1 (ENSOARG00020009547) #25	SPON1 (ENSOARG00020009467) #26	RRAS2 (ENSOARG00020009434) #27	COPB1 (ENSOARG00020009319) #28	PSMA1 (ENSOARG00020009114) #29	PDE3B (ENSOARG00020008382) #30	CYP2R1 (ENSOARG00020008229) #33	ENSOARG00020007898 ##35	CALCB (ENSOARG00020007826) #35	ENSOARG00020007797	ENSOARG00020007780	ENSOARG00020007755
Goat	MODERN SPECIES	6	LYVE1 (ENSCHIG00000025251)	IRAG1 (ENSCHIG00000025822) #7	ENSCHIG00000024170	CTR9 (ENSCHIG00000011919) #9	EIF4G2 (ENSCHIG00000017894) #10	ZBED5 (ENSCHIG00000011923) #11	GALNT18 (ENSCHIG00000012207) #12	USP47 (ENSCHIG00000009969) #14	DKK3 (ENSCHIG00000011378) #15	MICAL2 (ENSCHIG00000024501) #18	ENSCHIG00000011918	PARVA (ENSCHIG00000024855) #19	TEAD1 (ENSCHIG00000015300)	ENSCHIG00000013740	RASSF10 (ENSCHIG00000006553) #21	BMAL1 (ENSCHIG00000008573) #22	BTBD10 (ENSCHIG00000026399) #23	ENSCHIG00000012359	PTH (ENSCHIG00000007602) #24	FAR1 (ENSCHIG00000018043) #25	SPON1 (ENSCHIG00000024597) #26	RRAS2 (ENSCHIG00000021550) #27	ENSCHIG00000012272	COPB1 (ENSCHIG00000016260) #28	PSMA1 (ENSCHIG00000019700) #29	PDE3B (ENSCHIG00000009677) #30	CYP2R1 (ENSCHIG00000015003) #33	ENSCHIG00000021176 ##35	CRSP-1 (ENSCHIG00000016334) #35	CRSP-2 (ENSCHIG00000026890) #37	ENSCHIG00000016702
Siberian musk deer	MODERN SPECIES	1169	AMPD3 (ENSMMSG00000009315)	RNF141 (ENSMMSG00000009603)	LYVE1 (ENSMMSG00000009629)	IRAG1 (ENSMMSG00000009706) #7	CTR9 (ENSMMSG00000010186) #9	EIF4G2 (ENSMMSG00000010289) #10	ZBED5 (ENSMMSG00000010540) #11	GALNT18 (ENSMMSG00000010551) #12	USP47 (ENSMMSG00000010640) #14	DKK3 (ENSMMSG00000010926) #15	ENSMMSG00000010985 #18	PARVA (ENSMMSG00000011180) #19	TEAD1 (ENSMMSG00000011262)	RASSF10 (ENSMMSG00000011644) #21	ENSMMSG00000011649	BMAL1 (ENSMMSG00000011691) #22	BTBD10 (ENSMMSG00000012324) #23	PTH (ENSMMSG00000012413) #24	ENSMMSG00000012441 #25
Yarkand deer	MODERN SPECIES		AMPD3 (ENSCHYG00000001454)	RNF141 (ENSCHYG00000001418)	LYVE1 (ENSCHYG00000001378)	IRAG1 (ENSCHYG00000001200) #7	CTR9 (ENSCHYG00000001089) #9	EIF4G2 (ENSCHYG00000001043) #10	GALNT18 (ENSCHYG00000000988) #12	USP47 (ENSCHYG00000000758) #14	DKK3 (ENSCHYG00000000704) #15	MICAL2 (ENSCHYG00000000379) #18	ENSCHYG00000000289	PARVA (ENSCHYG00000000246) #19	TEAD1 (ENSCHYG00000000137)	RASSF10 (ENSCHYG00000000084) #21	ENSCHYG00000000074	BMAL1 (ENSCHYG00000000046) #22	BTBD10 (ENSCHYG00000000026) #23	PTH (ENSCHYG00000000021) #24	FAR1 (ENSCHYG00000000016) #25	SPON1 (ENSCHYG00000000009) #26	RRAS2 (ENSCHYG00000000005) #27	COPB1 (ENSCHYG00000000002) #28	PSMA1 (ENSCHYG00000018665) #29	ENSCHYG00000018606	PDE3B (ENSCHYG00000018075) #30	ENSCHYG00000018022	CYP2R1 (ENSCHYG00000017908) #33	ENSCHYG00000017748 ##35	ENSCHYG00000017694 #35	ENSCHYG00000017642 #37	ENSCHYG00000017547
Camelidae	ANCESTRAL SPECIES	25	ENSGT00950000183017.b.a	ENSGT00940000155385	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.a #35	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Arabian camel	MODERN SPECIES	1	SWAP70 (ENSCDRG00005007968)	SBF2 (ENSCDRG00005007412)	ADM (ENSCDRG00005007365)	AMPD3 (ENSCDRG00005007074)	RNF141 (ENSCDRG00005006965)	LYVE1 (ENSCDRG00005006855)	IRAG1 (ENSCDRG00005006595) #7	CTR9 (ENSCDRG00005019577) #9	EIF4G2 (ENSCDRG00005019554) #10	GALNT18 (ENSCDRG00005019515) #12	USP47 (ENSCDRG00005019301) #14	DKK3 (ENSCDRG00005019246) #15	MICAL2 (ENSCDRG00005018951) #18	PARVA (ENSCDRG00005018726) #19	TEAD1 (ENSCDRG00005018251)	BMAL1 (ENSCDRG00005018014) #22	BTBD10 (ENSCDRG00005017807) #23	PTH (ENSCDRG00005017750) #24	FAR1 (ENSCDRG00005017647) #25	SPON1 (ENSCDRG00005017555) #26	ENSCDRG00005017514 #27	COPB1 (ENSCDRG00005017432) #28	PSMA1 (ENSCDRG00005017399) #29	ENSCDRG00005017368	PDE3B (ENSCDRG00005017202) #30	CYP2R1 (ENSCDRG00005017151) #33	ENSCDRG00005017138 #35	ENSCDRG00005017126 #37	ENSCDRG00005017091 #37	ENSCDRG00005017047 #37	INSC (ENSCDRG00005016735)
Alpaca	MODERN SPECIES	467																ENSVPAG00000005926 #22	BTBD10 (ENSVPAG00000005930) #23	PTH (ENSVPAG00000005933) #24
Suina	ANCESTRAL SPECIES	34	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205.a.a #35	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Pig	MODERN SPECIES	10	AMPD3 (ENSSSCG00000022492)	RNF141 (ENSSSCG00000036546)	LYVE1 (ENSSSCG00000029886)	IRAG1 (ENSSSCG00000020720) #7	CTR9 (ENSSSCG00000013406) #9	EIF4G2 (ENSSSCG00000013405) #10	ZBED5 (ENSSSCG00000033411) #11	GALNT18 (ENSSSCG00000013403) #12	ENSSSCG00000031143	USP47 (ENSSSCG00000013402) #14	DKK3 (ENSSSCG00000013401) #15	ENSSSCG00000031706 #18	PARVA (ENSSSCG00000028827) #19	TEAD1 (ENSSSCG00000013399)	RASSF10 (ENSSSCG00000022060) #21	BMAL1 (ENSSSCG00000013397) #22	BTBD10 (ENSSSCG00000013395) #23	PTH (ENSSSCG00000013394) #24	FAR1 (ENSSSCG00000021170) #25	SPON1 (ENSSSCG00000013393) #26	ENSSSCG00000033786 #27	COPB1 (ENSSSCG00000013392) #28	PSMA1 (ENSSSCG00000013391) #29	PDE3B (ENSSSCG00000013388) #30	CYP2R1 (ENSSSCG00000013389) #33	ENSSSCG00000013390 #35	ENSSSCG00000035649 #35	ENSSSCG00000013387 #37	ENSSSCG00000013386 #37	ENSSSCG00000026512	INSC (ENSSSCG00000013385)
Chacoan peccary	MODERN SPECIES	919	AMPD3 (ENSCWAG00000014982)	RNF141 (ENSCWAG00000014908)	LYVE1 (ENSCWAG00000014853)	IRAG1 (ENSCWAG00000014430) #7	CTR9 (ENSCWAG00000014356) #9	EIF4G2 (ENSCWAG00000014282) #10	ZBED5 (ENSCWAG00000014266) #11	GALNT18 (ENSCWAG00000014175) #12	USP47 (ENSCWAG00000013451) #14	DKK3 (ENSCWAG00000013360) #15	MICAL2 (ENSCWAG00000013219) #18	ENSCWAG00000012923	PARVA (ENSCWAG00000012840) #19	TEAD1 (ENSCWAG00000012371)	RASSF10 (ENSCWAG00000012328) #21	BMAL1 (ENSCWAG00000011749) #22	BTBD10 (ENSCWAG00000019816) #23	PTH (ENSCWAG00000019804) #24	FAR1 (ENSCWAG00000019767) #25	SPON1 (ENSCWAG00000019714) #26	RRAS2 (ENSCWAG00000019696) #27	COPB1 (ENSCWAG00000019654) #28	PSMA1 (ENSCWAG00000019593) #29	PDE3B (ENSCWAG00000019464) #30	CYP2R1 (ENSCWAG00000019414) #33	ENSCWAG00000019380 #35	ENSCWAG00000019355 #37	ENSCWAG00000019335 #37	ENSCWAG00000019318	INSC (ENSCWAG00000019215)	SOX6 (ENSCWAG00000018979)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Carnivora	ANCESTRAL SPECIES	7	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Felidae	ANCESTRAL SPECIES		ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Panthera	ANCESTRAL SPECIES	13	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Tiger	MODERN SPECIES	181	ADM (ENSPTIG00000017584)	AMPD3 (ENSPTIG00000019440)	RNF141 (ENSPTIG00000020284)	LYVE1 (ENSPTIG00000020549)	IRAG1 (ENSPTIG00000004933) #7	CTR9 (ENSPTIG00000011616) #9	EIF4G2 (ENSPTIG00000012255) #10	ZBED5 (ENSPTIG00000004617) #11	GALNT18 (ENSPTIG00000014136) #12	USP47 (ENSPTIG00000016427) #14	DKK3 (ENSPTIG00000020121) #15	MICAL2 (ENSPTIG00000021123) #18	ENSPTIG00000008206	PARVA (ENSPTIG00000010785) #19	TEAD1 (ENSPTIG00000012563)	BMAL1 (ENSPTIG00000013181) #22	BTBD10 (ENSPTIG00000014424) #23	PTH (ENSPTIG00000015285) #24	FAR1 (ENSPTIG00000016508) #25	SPON1 (ENSPTIG00000017450) #26	RRAS2 (ENSPTIG00000018792) #27	COPB1 (ENSPTIG00000020083) #28	PSMA1 (ENSPTIG00000006030) #29	PDE3B (ENSPTIG00000007753) #30	CYP2R1 (ENSPTIG00000010838) #33	CALCA (ENSPTIG00000011763)	CALCB (ENSPTIG00000012066) #37	INSC (ENSPTIG00000013388)	SOX6 (ENSPTIG00000016273)	C11orf58 (ENSPTIG00000020023)	PLEKHA7 (ENSPTIG00000020256)
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a	ENSGT00390000017491.t.u.j.a
leopard	MODERN SPECIES	29	RNF141 (ENSPPRG00000001250)	LYVE1 (ENSPPRG00000000781)	IRAG1 (ENSPPRG00000023225) #7	CTR9 (ENSPPRG00000012814) #9	EIF4G2 (ENSPPRG00000012435) #10	ZBED5 (ENSPPRG00000019184) #11	GALNT18 (ENSPPRG00000009793) #12	USP47 (ENSPPRG00000008713) #14	DKK3 (ENSPPRG00000006342) #15	MICAL2 (ENSPPRG00000005596) #18	ENSPPRG00000023011	ENSPPRG00000021793	PARVA (ENSPPRG00000020794) #19	TEAD1 (ENSPPRG00000017830)	RASSF10 (ENSPPRG00000018650) #21	BMAL1 (ENSPPRG00000011644) #22	BTBD10 (ENSPPRG00000007872) #23	PTH (ENSPPRG00000007081) #24	ENSPPRG00000018396	FAR1 (ENSPPRG00000006618) #25	SPON1 (ENSPPRG00000006195) #26	RRAS2 (ENSPPRG00000006082) #27	COPB1 (ENSPPRG00000003968) #28	PSMA1 (ENSPPRG00000001324) #29	PDE3B (ENSPPRG00000000697) #30	CYP2R1 (ENSPPRG00000022665) #33	ENSPPRG00000023221	CALCB (ENSPPRG00000020148) #37	INSC (ENSPPRG00000016954)	ENSPPRG00000013736	SOX6 (ENSPPRG00000013207)
lion	MODERN SPECIES	10	RNF141 (ENSPLOG00000009620)	LYVE1 (ENSPLOG00000009661)	IRAG1 (ENSPLOG00000009749) #7	ENSPLOG00000010096	CTR9 (ENSPLOG00000010112) #9	EIF4G2 (ENSPLOG00000007481) #10	ZBED5 (ENSPLOG00000007663) #11	GALNT18 (ENSPLOG00000007788) #12	USP47 (ENSPLOG00000007945) #14	DKK3 (ENSPLOG00000008271) #15	MICAL2 (ENSPLOG00000008342) #18	ENSPLOG00000008438	PARVA (ENSPLOG00000008506) #19	TEAD1 (ENSPLOG00000008642)	RASSF10 (ENSPLOG00000008927) #21	BMAL1 (ENSPLOG00000008980) #22	BTBD10 (ENSPLOG00000009236) #23	PTH (ENSPLOG00000009324) #24	ENSPLOG00000009349	FAR1 (ENSPLOG00000009385) #25	SPON1 (ENSPLOG00000009449) #26	RRAS2 (ENSPLOG00000009540) #27	COPB1 (ENSPLOG00000009586) #28	PSMA1 (ENSPLOG00000009654) #29	PDE3B (ENSPLOG00000009724) #30	CYP2R1 (ENSPLOG00000009867) #33	CALCA (ENSPLOG00000009923)	INSC (ENSPLOG00000010032)	SOX6 (ENSPLOG00000010257)	ENSPLOG00000010453	C11orf58 (ENSPLOG00000010495)
Cat	MODERN SPECIES	241	ADM (ENSFCAG00000043200)	AMPD3 (ENSFCAG00000000400)	RNF141 (ENSFCAG00000026381)	LYVE1 (ENSFCAG00000000404)	IRAG1 (ENSFCAG00000000405) #7	CTR9 (ENSFCAG00000000407) #9	EIF4G2 (ENSFCAG00000022269) #10	ZBED5 (ENSFCAG00000000411) #11	GALNT18 (ENSFCAG00000002235) #12	USP47 (ENSFCAG00000000922) #14	DKK3 (ENSFCAG00000028463) #15	MICAL2 (ENSFCAG00000024810) #18	PARVA (ENSFCAG00000026661) #19	TEAD1 (ENSFCAG00000019353)	RASSF10 (ENSFCAG00000041884) #21	ARNTL (ENSFCAG00000010983) #22	BTBD10 (ENSFCAG00000030981) #23	PTH (ENSFCAG00000045547) #24	FAR1 (ENSFCAG00000024350) #25	SPON1 (ENSFCAG00000009573) #26	RRAS2 (ENSFCAG00000009578) #27	COPB1 (ENSFCAG00000011380) #28	PSMA1 (ENSFCAG00000011381) #29	PDE3B (ENSFCAG00000022296) #30	CYP2R1 (ENSFCAG00000011383) #33	ENSFCAG00000035489 #35	ENSFCAG00000051414	CALCB (ENSFCAG00000034071) #37	INSC (ENSFCAG00000002733)	SOX6 (ENSFCAG00000002214)	CD1H11orf58 (ENSFCAG00000036407)
Caniformia	ANCESTRAL SPECIES	25	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a.a.b #29	ENSGT00550000074855.u.a.b #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Canidae	ANCESTRAL SPECIES	1	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00950000182803.B.d.a.j	ENSGT00940000155456 #12	ENSGT00940000172584.c.b.b	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.v.a.b #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a	ENSGT00390000017491.t.u
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00950000182803.B.d.a.j	ENSGT00940000155456 #12	ENSGT00940000172584.c.b.b	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a.b #29	ENSGT00940000159336.k #30	ENSGT00940000158305 #33	ENSGT00390000006370.g	ENSGT00940000156267 #37	ENSGT00940000162876.k.b	ENSGT00940000162876.l	ENSGT00940000167380	ENSGT00390000001511
Dog	MODERN SPECIES	13	RNF141 (ENSCAFG00845014640)	LYVE1 (ENSCAFG00845014712)	IRAG1 (ENSCAFG00845014806) #7	ENSCAFG00845014966	CTR9 (ENSCAFG00845015130) #9	EIF4G2 (ENSCAFG00845015267) #10	ZBED5 (ENSCAFG00845015479) #11	ENSCAFG00845015498	GALNT18 (ENSCAFG00845015625) #12	USP47 (ENSCAFG00845016435) #14	DKK3 (ENSCAFG00845017299) #15	MICAL2 (ENSCAFG00845017757) #18	PARVA (ENSCAFG00845019108) #19	TEAD1 (ENSCAFG00845019509)	RASSF10 (ENSCAFG00845020309) #21	BMAL1 (ENSCAFG00845020372) #22	BTBD10 (ENSCAFG00845020680) #23	PTH (ENSCAFG00845020842) #24	FAR1 (ENSCAFG00845020980) #25	SPON1 (ENSCAFG00845021179) #26	RRAS2 (ENSCAFG00845021419) #27	COPB1 (ENSCAFG00845021578) #28	PSMA1 (ENSCAFG00845021870) #29	ENSCAFG00845022095 #30	ENSCAFG00845022374 #33	ENSCAFG00845022519	ENSCAFG00845022568	ENSCAFG00845022709 #30	CYP2R1 (ENSCAFG00845022957) #33	ENSCAFG00845023032	ENSCAFG00845023057
Dingo	MODERN SPECIES	231	RNF141 (ENSCAFG00020014592)	LYVE1 (ENSCAFG00020014597)	IRAG1 (ENSCAFG00020014604) #7	CTR9 (ENSCAFG00020014706) #9	EIF4G2 (ENSCAFG00020015650) #10	ZBED5 (ENSCAFG00020016298) #11	ENSCAFG00020016299	GALNT18 (ENSCAFG00020016314) #12	ENSCAFG00020016327	USP47 (ENSCAFG00020016333) #14	DKK3 (ENSCAFG00020016344) #15	MICAL2 (ENSCAFG00020016361) #18	PARVA (ENSCAFG00020016402) #19	TEAD1 (ENSCAFG00020016417)	RASSF10 (ENSCAFG00020016424) #21	BMAL1 (ENSCAFG00020016447) #22	BTBD10 (ENSCAFG00020016555) #23	PTH (ENSCAFG00020016557) #24	ENSCAFG00020016558	FAR1 (ENSCAFG00020016575) #25	SPON1 (ENSCAFG00020017055) #26	RRAS2 (ENSCAFG00020017190) #27	COPB1 (ENSCAFG00020017195) #28	ENSCAFG00020017202 #29	PDE3B (ENSCAFG00020017213) #30	CYP2R1 (ENSCAFG00020017254) #33	ENSCAFG00020017266	ENSCAFG00020017268	CALCB (ENSCAFG00020017275) #37	ENSCAFG00020017277	ENSCAFG00020017285
Red fox	MODERN SPECIES	70	RNF141 (ENSVVUG00000025703)	LYVE1 (ENSVVUG00000025700)	IRAG1 (ENSVVUG00000025694) #7	CTR9 (ENSVVUG00000025690) #9	EIF4G2 (ENSVVUG00000025335) #10	ZBED5 (ENSVVUG00000025297) #11	ENSVVUG00000025296	GALNT18 (ENSVVUG00000025293) #12	ENSVVUG00000025285	USP47 (ENSVVUG00000025275) #14	DKK3 (ENSVVUG00000025251) #15	MICAL2 (ENSVVUG00000025208) #18	PARVA (ENSVVUG00000025185) #19	TEAD1 (ENSVVUG00000025176)	RASSF10 (ENSVVUG00000025172) #21	ARNTL (ENSVVUG00000025156) #22	BTBD10 (ENSVVUG00000025143) #23	PTH (ENSVVUG00000025139) #24	FAR1 (ENSVVUG00000025136) #25	SPON1 (ENSVVUG00000024273) #26	RRAS2 (ENSVVUG00000024249) #27	COPB1 (ENSVVUG00000024246) #28	ENSVVUG00000024241 #29	PDE3B (ENSVVUG00000024229) #30	ENSVVUG00000024228	ENSVVUG00000024225 #37	ENSVVUG00000024224	CYP2R1 (ENSVVUG00000024223) #33	ENSVVUG00000024222	CALCB (ENSVVUG00000024219) #37	ENSVVUG00000024218
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a.a.b #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205 #35	ENSGT00940000167380	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B
Mustelinae	ANCESTRAL SPECIES	30	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a.a.b #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000166205 #35	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Ferret	MODERN SPECIES	194	RNF141 (ENSMPUG00000012849)	LYVE1 (ENSMPUG00000012852)	IRAG1 (ENSMPUG00000012870) #7	CTR9 (ENSMPUG00000012875) #9	EIF4G2 (ENSMPUG00000012886) #10	ZBED5 (ENSMPUG00000018990) #11	GALNT18 (ENSMPUG00000012990) #12	USP47 (ENSMPUG00000012995) #14	DKK3 (ENSMPUG00000013009) #15	ENSMPUG00000013019	MICAL2 (ENSMPUG00000013022) #18	ENSMPUG00000013082	PARVA (ENSMPUG00000013102) #19	TEAD1 (ENSMPUG00000013114)	RASSF10 (ENSMPUG00000013121) #21	BMAL1 (ENSMPUG00000013135) #22	BTBD10 (ENSMPUG00000013145) #23	PTH (ENSMPUG00000013152) #24	FAR1 (ENSMPUG00000013158) #25	SPON1 (ENSMPUG00000013162) #26	RRAS2 (ENSMPUG00000013165) #27	COPB1 (ENSMPUG00000013192) #28	PSMA1 (ENSMPUG00000013199) #29	PDE3B (ENSMPUG00000013242) #30	ENSMPUG00000018995	CYP2R1 (ENSMPUG00000013250) #33	ENSMPUG00000013255 #35	ENSMPUG00000013259	CALCB (ENSMPUG00000013262) #37	INSC (ENSMPUG00000013267)	ENSMPUG00000013278
American mink	MODERN SPECIES	13														TEAD1 (ENSNVIG00000021030)	RASSF10 (ENSNVIG00000021027) #21	BMAL1 (ENSNVIG00000020993) #22	BTBD10 (ENSNVIG00000020940) #23	PTH (ENSNVIG00000020930) #24	FAR1 (ENSNVIG00000020912) #25	SPON1 (ENSNVIG00000020895) #26	RRAS2 (ENSNVIG00000020872) #27	COPB1 (ENSNVIG00000020799) #28	ENSNVIG00000020759 #29	PDE3B (ENSNVIG00000020721) #30	CYP2R1 (ENSNVIG00000020712) #33	CALCA (ENSNVIG00000020682)	CALCB (ENSNVIG00000020671) #37	INSC (ENSNVIG00000020515)	SOX6 (ENSNVIG00000020411)	C11orf58 (ENSNVIG00000020393)	PLEKHA7 (ENSNVIG00000020293)
Ursidae	ANCESTRAL SPECIES	2							ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a.a.b #29	ENSGT00550000074855.u.a.b #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B
Giant Panda	MODERN SPECIES	7	ENSAMEG00000026798	ENSAMEG00000019553	OR6C1 (ENSAMEG00000024880)	OR6C3 (ENSAMEG00000027752)	ENSAMEG00000014598	OR6C76 (ENSAMEG00000019564)	ENSAMEG00000028022	ENSAMEG00000028051	ENSAMEG00000001150 #12	USP47 (ENSAMEG00000005838) #14	DKK3 (ENSAMEG00000005897) #15	MICAL2 (ENSAMEG00000005915) #18	PARVA (ENSAMEG00000005997) #19	TEAD1 (ENSAMEG00000002258)	RASSF10 (ENSAMEG00000026953) #21	ENSAMEG00000029410 #22	ENSAMEG00000002384 #23	PTH (ENSAMEG00000002395) #24	FAR1 (ENSAMEG00000002333) #25	SPON1 (ENSAMEG00000002355) #26	RRAS2 (ENSAMEG00000002367) #27	COPB1 (ENSAMEG00000002370) #28	PSMA1 (ENSAMEG00000002440) #29	PDE3B (ENSAMEG00000002486) #30	CYP2R1 (ENSAMEG00000002507) #33	CALCB (ENSAMEG00000001579) #37	ENSAMEG00000015132	INSC (ENSAMEG00000015118)	SOX6 (ENSAMEG00000015112)	C11orf58 (ENSAMEG00000002845)	PLEKHA7 (ENSAMEG00000002856)
Ursus	ANCESTRAL SPECIES	193							ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000186350	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855.u.a.a.b #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37
Polar bear	MODERN SPECIES	472							ENSUMAG00000016144	ZBED5 (ENSUMAG00000016156) #11	GALNT18 (ENSUMAG00000016168) #12	USP47 (ENSUMAG00000016212) #14	DKK3 (ENSUMAG00000016222) #15	MICAL2 (ENSUMAG00000016244) #18	ENSUMAG00000016340	PARVA (ENSUMAG00000016356) #19	TEAD1 (ENSUMAG00000016468)	BMAL1 (ENSUMAG00000016570) #22	BTBD10 (ENSUMAG00000016582) #23	PTH (ENSUMAG00000016585) #24	FAR1 (ENSUMAG00000016590) #25	SPON1 (ENSUMAG00000016643) #26	RRAS2 (ENSUMAG00000016991) #27	COPB1 (ENSUMAG00000017001) #28	PSMA1 (ENSUMAG00000017009) #29	PDE3B (ENSUMAG00000017044) #30	CYP2R1 (ENSUMAG00000017113) #33	ENSUMAG00000017142 #37
American black bear	MODERN SPECIES	4157																BMAL1 (ENSUAMG00000022338) #22
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a	ENSGT00390000017491.t.u
Equus	ANCESTRAL SPECIES	40	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00390000013819	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Donkey	MODERN SPECIES	12	ENSEASG00005034520	AMPD3 (ENSEASG00005005865)	RNF141 (ENSEASG00005005870)	LYVE1 (ENSEASG00005005872)	IRAG1 (ENSEASG00005005874) #7	CTR9 (ENSEASG00005005878) #9	EIF4G2 (ENSEASG00005005881) #10	ZBED5 (ENSEASG00005005885) #11	GALNT18 (ENSEASG00005005887) #12	USP47 (ENSEASG00005005889) #14	DKK3 (ENSEASG00005005891) #15	MICAL2 (ENSEASG00005005893) #18	PARVA (ENSEASG00005005901) #19	TEAD1 (ENSEASG00005005906)	RASSF10 (ENSEASG00005005911) #21	BMAL1 (ENSEASG00005005913) #22	BTBD10 (ENSEASG00005005917) #23	PTH (ENSEASG00005005922) #24	FAR1 (ENSEASG00005005927) #25	SPON1 (ENSEASG00005005931) #26	RRAS2 (ENSEASG00005005934) #27	ENSEASG00005026622	COPB1 (ENSEASG00005005937) #28	PSMA1 (ENSEASG00005005940) #29	PDE3B (ENSEASG00005005968) #30	ENSEASG00005006005 #33	ENSEASG00005006008 #35	ENSEASG00005027691	ENSEASG00005030327	CALCB (ENSEASG00005006012) #37	INSC (ENSEASG00005006018)
Horse	MODERN SPECIES	28	ADM (ENSECAG00000024531)	AMPD3 (ENSECAG00000000816)	RNF141 (ENSECAG00000007910)	LYVE1 (ENSECAG00000008881)	IRAG1 (ENSECAG00000009101) #7	CTR9 (ENSECAG00000010969) #9	EIF4G2 (ENSECAG00000014700) #10	ZBED5 (ENSECAG00000006542) #11	GALNT18 (ENSECAG00000019364) #12	USP47 (ENSECAG00000020838) #14	DKK3 (ENSECAG00000022804) #15	MICAL2 (ENSECAG00000023190) #18	PARVA (ENSECAG00000005460) #19	TEAD1 (ENSECAG00000008332)	RASSF10 (ENSECAG00000012098) #21	ARNTL (ENSECAG00000012118) #22	BTBD10 (ENSECAG00000017056) #23	PTH (ENSECAG00000019608) #24	FAR1 (ENSECAG00000019618) #25	SPON1 (ENSECAG00000020789) #26	RRAS2 (ENSECAG00000021393) #27	COPB1 (ENSECAG00000021898) #28	ENSECAG00000057029	PSMA1 (ENSECAG00000024086) #29	PDE3B (ENSECAG00000024797) #30	CYP2R1 (ENSECAG00000007597) #33	CALCA (ENSECAG00000007825)	ENSECAG00000008669	ENSECAG00000008818 #37	INSC (ENSECAG00000009559)	SOX6 (ENSECAG00000010880)
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00940000167380	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Greater horseshoe bat	MODERN SPECIES	2	AMPD3 (ENSRFEG00010001799)	RNF141 (ENSRFEG00010001738)	ENSRFEG00010001722	LYVE1 (ENSRFEG00010001700)	IRAG1 (ENSRFEG00010001473) #7	CTR9 (ENSRFEG00010001353) #9	EIF4G2 (ENSRFEG00010001270) #10	ENSRFEG00010001223	GALNT18 (ENSRFEG00010001162) #12	USP47 (ENSRFEG00010000943) #14	DKK3 (ENSRFEG00010000855) #15	ENSRFEG00010000712 #18	PARVA (ENSRFEG00010000596) #19	TEAD1 (ENSRFEG00010021681)	RASSF10 (ENSRFEG00010021663) #21	BMAL1 (ENSRFEG00010021622) #22	BTBD10 (ENSRFEG00010021587) #23	PTH (ENSRFEG00010021570) #24	FAR1 (ENSRFEG00010021546) #25	SPON1 (ENSRFEG00010021527) #26	RRAS2 (ENSRFEG00010021520) #27	COPB1 (ENSRFEG00010021503) #28	PSMA1 (ENSRFEG00010021475) #29	PDE3B (ENSRFEG00010021438) #30	CYP2R1 (ENSRFEG00010021421) #33	ENSRFEG00010021417 #37	ENSRFEG00010021410	ENSRFEG00010021405 #37	ENSRFEG00010021391	INSC (ENSRFEG00010021354)	SOX6 (ENSRFEG00010021298)
Microbat	MODERN SPECIES	998	CTR9 (ENSMLUG00000006212) #9	EIF4G2 (ENSMLUG00000016149) #10	ZBED5 (ENSMLUG00000011818) #11	ENSMLUG00000030706	GALNT18 (ENSMLUG00000007703) #12	ENSMLUG00000029115	USP47 (ENSMLUG00000023786) #14	DKK3 (ENSMLUG00000011767) #15	MICAL2 (ENSMLUG00000003421) #18	ENSMLUG00000003436	ENSMLUG00000027136	PARVA (ENSMLUG00000003439) #19	TEAD1 (ENSMLUG00000009137)	RASSF10 (ENSMLUG00000009160) #21	ENSMLUG00000023824	BMAL1 (ENSMLUG00000008503) #22	ENSMLUG00000000677 #24	BTBD10 (ENSMLUG00000008529) #23	ENSMLUG00000024101	FAR1 (ENSMLUG00000009017) #25	ENSMLUG00000006968 #26	ENSMLUG00000024566 #26	RRAS2 (ENSMLUG00000007005) #27	COPB1 (ENSMLUG00000009221) #28	PSMA1 (ENSMLUG00000009251) #29	PDE3B (ENSMLUG00000009266) #30	CYP2R1 (ENSMLUG00000000625) #33	ENSMLUG00000001238
Megabat	MODERN SPECIES	615																BMAL1 (ENSPVAG00000006712) #22	BTBD10 (ENSPVAG00000006715) #23	PTH (ENSPVAG00000006716) #24
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Glires	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Rodentia	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Myomorpha	ANCESTRAL SPECIES	13	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Muroidea	ANCESTRAL SPECIES	59	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Muroidea_A	ANCESTRAL SPECIES		ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.l	ENSGT01030000235062
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.k.b	ENSGT00940000155817.a.a
Chinese hamster chok1gshd	MODERN SPECIES	401	Lyve1 (ENSCGRG00001024678)	Irag1 (ENSCGRG00001014888) #7	ENSCGRG00001007533	Ctr9 (ENSCGRG00001019483) #9	Eif4g2 (ENSCGRG00001000464) #10	ENSCGRG00001010867	Galnt18 (ENSCGRG00001017979) #12	Usp47 (ENSCGRG00001022381) #14	Dkk3 (ENSCGRG00001011083) #15	Mical2 (ENSCGRG00001018120) #18	ENSCGRG00001015264	Parva (ENSCGRG00001012664) #19	Tead1 (ENSCGRG00001013104)	Rassf10 (ENSCGRG00001001920) #21	ENSCGRG00001008296	Arntl (ENSCGRG00001019562) #22	ENSCGRG00001021117 #23	Pth (ENSCGRG00001000135) #24	Far1 (ENSCGRG00001015317) #25	Spon1 (ENSCGRG00001021186) #26	Rras2 (ENSCGRG00001010770) #27	ENSCGRG00001014592	Copb1 (ENSCGRG00001016852) #28	Psma1 (ENSCGRG00001018590) #29	Pde3b (ENSCGRG00001010130) #30	ENSCGRG00001000399	ENSCGRG00001007984	Cyp2r1 (ENSCGRG00001016255) #33	Calca (ENSCGRG00001021467)	ENSCGRG00001000446	Calcb (ENSCGRG00001001258) #37
Golden Hamster	MODERN SPECIES	673	Adm (ENSMAUG00000010281)	Ampd3 (ENSMAUG00000009879)	Rnf141 (ENSMAUG00000019143)	Lyve1 (ENSMAUG00000017682)	Irag1 (ENSMAUG00000015553) #7	Ctr9 (ENSMAUG00000016366) #9	Eif4g2 (ENSMAUG00000012197) #10	Galnt18 (ENSMAUG00000011682) #12	ENSMAUG00000006179	Usp47 (ENSMAUG00000011582) #14	Dkk3 (ENSMAUG00000019741) #15	Mical2 (ENSMAUG00000008513) #18	ENSMAUG00000000533	Parva (ENSMAUG00000008966) #19	Tead1 (ENSMAUG00000016475)	Arntl (ENSMAUG00000009271) #22	Btbd10 (ENSMAUG00000013779) #23	Pth (ENSMAUG00000010728) #24	ENSMAUG00000006495	Far1 (ENSMAUG00000010126) #25	ENSMAUG00000019672 #26	ENSMAUG00000006080	ENSMAUG00000010226 #26	Rras2 (ENSMAUG00000018548) #27	ENSMAUG00000013937	Copb1 (ENSMAUG00000020925) #28	Cyp2r1 (ENSMAUG00000019753) #33	Calca (ENSMAUG00000001971)	Calcb (ENSMAUG00000018976) #37	Insc (ENSMAUG00000013925)	Sox6 (ENSMAUG00000006668)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.l	ENSGT01030000235062
Prairie vole	MODERN SPECIES	16	Adm (ENSMOCG00000021656)	Ampd3 (ENSMOCG00000018222)	Rnf141 (ENSMOCG00000009386)	Lyve1 (ENSMOCG00000015227)	Irag1 (ENSMOCG00000010989) #7	Ctr9 (ENSMOCG00000020082) #9	Eif4g2 (ENSMOCG00000020486) #10	Galnt18 (ENSMOCG00000000476) #12	Usp47 (ENSMOCG00000007031) #14	Dkk3 (ENSMOCG00000005883) #15	Mical2 (ENSMOCG00000000924) #18	ENSMOCG00000020902	Parva (ENSMOCG00000014591) #19	Tead1 (ENSMOCG00000010219)	Rassf10 (ENSMOCG00000009099) #21	Arntl (ENSMOCG00000010413) #22	Btbd10 (ENSMOCG00000011664) #23	Pth (ENSMOCG00000004314) #24	Far1 (ENSMOCG00000021238) #25	Spon1 (ENSMOCG00000013869) #26	Rras2 (ENSMOCG00000001879) #27	Copb1 (ENSMOCG00000007249) #28	Psma1 (ENSMOCG00000001230) #29	Pde3b (ENSMOCG00000014972) #30	Cyp2r1 (ENSMOCG00000015196) #33	Calca (ENSMOCG00000021156)	Calcb (ENSMOCG00000013740) #37	Insc (ENSMOCG00000020814)	Sox6 (ENSMOCG00000004816)	1110004F10Rik (ENSMOCG00000009144)	Plekha7 (ENSMOCG00000017575)
Northern American deer mouse	MODERN SPECIES		Rnf141 (ENSPEMG00000023014)	Lyve1 (ENSPEMG00000023759)	Irag1 (ENSPEMG00000009675) #7	Ctr9 (ENSPEMG00000009152) #9	Eif4g2 (ENSPEMG00000014969) #10	ENSPEMG00000025634 #11	Galnt18 (ENSPEMG00000013223) #12	Usp47 (ENSPEMG00000012643) #14	Dkk3 (ENSPEMG00000017049) #15	Mical2 (ENSPEMG00000008404) #18	ENSPEMG00000000182	Parva (ENSPEMG00000000432) #19	Tead1 (ENSPEMG00000008435)	Rassf10 (ENSPEMG00000006120) #21	ENSPEMG00000024980	Arntl (ENSPEMG00000011047) #22	Btbd10 (ENSPEMG00000010670) #23	Pth (ENSPEMG00000013697) #24	Far1 (ENSPEMG00000020800) #25	Spon1 (ENSPEMG00000013759) #26	Rras2 (ENSPEMG00000030965) #27	Copb1 (ENSPEMG00000015316) #28	Psma1 (ENSPEMG00000011421) #29	Pde3b (ENSPEMG00000017402) #30	Cyp2r1 (ENSPEMG00000016804) #33	Calca (ENSPEMG00000018008)	Calcb (ENSPEMG00000006071) #37	Insc (ENSPEMG00000009976)	ENSPEMG00000028916	ENSPEMG00000025150	Plekha7 (ENSPEMG00000011588)
Murinae	ANCESTRAL SPECIES		ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Mus	ANCESTRAL SPECIES		ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.s #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Mus_B	ANCESTRAL SPECIES		ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.s #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Mouse	MODERN SPECIES	16	Sbf2 (ENSMUSG00000038371)	Adm (ENSMUSG00000030790)	Ampd3 (ENSMUSG00000005686)	Rnf141 (ENSMUSG00000030788)	Lyve1 (ENSMUSG00000030787)	Irag1 (ENSMUSG00000005611) #7	Ctr9 (ENSMUSG00000005609) #9	Eif4g2 (ENSMUSG00000005610) #10	Galnt18 (ENSMUSG00000038296) #12	Usp47 (ENSMUSG00000059263) #14	Dkk3 (ENSMUSG00000030772) #15	Mical2 (ENSMUSG00000038244) #18	Parva (ENSMUSG00000030770) #19	Tead1 (ENSMUSG00000055320)	Rassf10 (ENSMUSG00000098132) #21	Arntl (ENSMUSG00000055116) #22	Btbd10 (ENSMUSG00000038187) #23	Pth (ENSMUSG00000059077) #24	Far1 (ENSMUSG00000030759) #25	Spon1 (ENSMUSG00000038156) #26	Rras2 (ENSMUSG00000055723) #27	Copb1 (ENSMUSG00000030754) #28	Psma1 (ENSMUSG00000030751) #29	Pde3b (ENSMUSG00000030671) #30	Cyp2r1 (ENSMUSG00000030670) #33	Calca (ENSMUSG00000030669)	Calcb (ENSMUSG00000030666) #37	Insc (ENSMUSG00000048782)	Sox6 (ENSMUSG00000051910)	1110004F10Rik (ENSMUSG00000030663)	Plekha7 (ENSMUSG00000045659)
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.s #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00960000193118	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687
Steppe mouse	MODERN SPECIES	3369	Ampd3 (ENSMSIG00000028153)	Rnf141 (ENSMSIG00000028164)	Lyve1 (ENSMSIG00000028177)	Irag1 (ENSMSIG00000028186) #7	Ctr9 (ENSMSIG00000028218) #9	Eif4g2 (ENSMSIG00000028228) #10	Galnt18 (ENSMSIG00000028271) #12	Usp47 (ENSMSIG00000028329) #14	Dkk3 (ENSMSIG00000028428) #15	Mical2 (ENSMSIG00000028461) #18	ENSMSIG00000028511	Parva (ENSMSIG00000028522) #19	Tead1 (ENSMSIG00000028550)	ENSMSIG00000028653	Rassf10 (ENSMSIG00000028654) #21	Arntl (ENSMSIG00000028665) #22	Btbd10 (ENSMSIG00000028709) #23	Pth (ENSMSIG00000028748) #24	ENSMSIG00000028759	Far1 (ENSMSIG00000028764) #25	ENSMSIG00000028777	ENSMSIG00000028778	Spon1 (ENSMSIG00000028779) #26	Rras2 (ENSMSIG00000028796) #27	Copb1 (ENSMSIG00000028801) #28	Psma1 (ENSMSIG00000028812) #29	Pde3b (ENSMSIG00000028820) #30	Cyp2r1 (ENSMSIG00000028834) #33	ENSMSIG00000028838	Calcb (ENSMSIG00000028843) #37	Insc (ENSMSIG00000028853)
spretus	MODERN SPECIES	16	MGP_SPRETEiJ_G0031439	Ampd3 (MGP_SPRETEiJ_G0031440)	Rnf141 (MGP_SPRETEiJ_G0031441)	Lyve1 (MGP_SPRETEiJ_G0031442)	Irag1 (MGP_SPRETEiJ_G0031443) #7	Ctr9 (MGP_SPRETEiJ_G0031444) #9	Eif4g2 (MGP_SPRETEiJ_G0031445) #10	Galnt18 (MGP_SPRETEiJ_G0031446) #12	Usp47 (MGP_SPRETEiJ_G0031447) #14	Dkk3 (MGP_SPRETEiJ_G0031448) #15	Mical2 (MGP_SPRETEiJ_G0031449) #18	MGP_SPRETEiJ_G0031450	Parva (MGP_SPRETEiJ_G0031451) #19	Tead1 (MGP_SPRETEiJ_G0031452)	Rassf10 (MGP_SPRETEiJ_G0031453) #21	Arntl (MGP_SPRETEiJ_G0031454) #22	Btbd10 (MGP_SPRETEiJ_G0031455) #23	Pth (MGP_SPRETEiJ_G0031456) #24	Far1 (MGP_SPRETEiJ_G0031457) #25	MGP_SPRETEiJ_G0031458	Spon1 (MGP_SPRETEiJ_G0031459) #26	Rras2 (MGP_SPRETEiJ_G0031460) #27	Copb1 (MGP_SPRETEiJ_G0031461) #28	Psma1 (MGP_SPRETEiJ_G0031462) #29	Pde3b (MGP_SPRETEiJ_G0031463) #30	Cyp2r1 (MGP_SPRETEiJ_G0031464) #33	Calca (MGP_SPRETEiJ_G0031465)	Calcb (MGP_SPRETEiJ_G0031466) #37	Insc (MGP_SPRETEiJ_G0031467)	Sox6 (MGP_SPRETEiJ_G0031468)	MGP_SPRETEiJ_G0031469
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0030324	Ampd3 (MGP_CAROLIEiJ_G0030325)	Rnf141 (MGP_CAROLIEiJ_G0030326)	Lyve1 (MGP_CAROLIEiJ_G0030327)	Irag1 (MGP_CAROLIEiJ_G0030328) #7	Ctr9 (MGP_CAROLIEiJ_G0030329) #9	MGP_CAROLIEiJ_G0030330	Galnt18 (MGP_CAROLIEiJ_G0030331) #12	Usp47 (MGP_CAROLIEiJ_G0030332) #14	Dkk3 (MGP_CAROLIEiJ_G0030333) #15	Mical2 (MGP_CAROLIEiJ_G0030334) #18	MGP_CAROLIEiJ_G0030335	Parva (MGP_CAROLIEiJ_G0030336) #19	Tead1 (MGP_CAROLIEiJ_G0030337)	Rassf10 (MGP_CAROLIEiJ_G0030338) #21	Arntl (MGP_CAROLIEiJ_G0030339) #22	Btbd10 (MGP_CAROLIEiJ_G0030340) #23	Pth (MGP_CAROLIEiJ_G0030341) #24	MGP_CAROLIEiJ_G0030342 #25	MGP_CAROLIEiJ_G0030343	Spon1 (MGP_CAROLIEiJ_G0030344) #26	Rras2 (MGP_CAROLIEiJ_G0030345) #27	Copb1 (MGP_CAROLIEiJ_G0030346) #28	Psma1 (MGP_CAROLIEiJ_G0030347) #29	Pde3b (MGP_CAROLIEiJ_G0030348) #30	Cyp2r1 (MGP_CAROLIEiJ_G0030349) #33	Calca (MGP_CAROLIEiJ_G0030350)	Calcb (MGP_CAROLIEiJ_G0030351) #37	Insc (MGP_CAROLIEiJ_G0030352)	Sox6 (MGP_CAROLIEiJ_G0030353)	1110004F10Rik (MGP_CAROLIEiJ_G0030354)
Shrew mouse	MODERN SPECIES		Adm (MGP_PahariEiJ_G0013536)	Ampd3 (MGP_PahariEiJ_G0013537)	Rnf141 (MGP_PahariEiJ_G0013538)	Lyve1 (MGP_PahariEiJ_G0013539)	Irag1 (MGP_PahariEiJ_G0013540) #7	Ctr9 (MGP_PahariEiJ_G0013541) #9	Eif4g2 (MGP_PahariEiJ_G0013542) #10	Galnt18 (MGP_PahariEiJ_G0013543) #12	Usp47 (MGP_PahariEiJ_G0013544) #14	Dkk3 (MGP_PahariEiJ_G0013545) #15	Mical2 (MGP_PahariEiJ_G0013546) #18	MGP_PahariEiJ_G0013547	Parva (MGP_PahariEiJ_G0013548) #19	Tead1 (MGP_PahariEiJ_G0013549)	Rassf10 (MGP_PahariEiJ_G0013550) #21	Arntl (MGP_PahariEiJ_G0013551) #22	Btbd10 (MGP_PahariEiJ_G0013552) #23	Pth (MGP_PahariEiJ_G0013553) #24	Far1 (MGP_PahariEiJ_G0013554) #25	Spon1 (MGP_PahariEiJ_G0013555) #26	Rras2 (MGP_PahariEiJ_G0013556) #27	Copb1 (MGP_PahariEiJ_G0013557) #28	Psma1 (MGP_PahariEiJ_G0013558) #29	Pde3b (MGP_PahariEiJ_G0013559) #30	Cyp2r1 (MGP_PahariEiJ_G0013560) #33	Calca (MGP_PahariEiJ_G0013561)	Calcb (MGP_PahariEiJ_G0013562) #37	Insc (MGP_PahariEiJ_G0013563)	Sox6 (MGP_PahariEiJ_G0013564)	1110004F10Rik (MGP_PahariEiJ_G0013565)	Plekha7 (MGP_PahariEiJ_G0013566)
Rat	MODERN SPECIES		rnf141 (ENSRNOG00000062870)	Irag1 (ENSRNOG00000017767) #7	Ctr9 (ENSRNOG00000017195) #9	Eif4g2 (ENSRNOG00000017158) #10	AABR07005031.1 (ENSRNOG00000029082)	Galnt18 (ENSRNOG00000017021) #12	Usp47 (ENSRNOG00000026754) #14	Dkk3 (ENSRNOG00000016343) #15	Mical2 (ENSRNOG00000016244) #18	Mical2 (ENSRNOG00000016210)	Parva (ENSRNOG00000015713) #19	Tead1 (ENSRNOG00000015488)	LOC120099907 (ENSRNOG00000043512)	Rassf10 (ENSRNOG00000064154) #21	ENSRNOG00000065112	Bmal1 (ENSRNOG00000014448) #22	Btbd10 (ENSRNOG00000014341) #23	Pth (ENSRNOG00000014318) #24	Far1 (ENSRNOG00000013176) #25	Spon1 (ENSRNOG00000058003) #26	Rras2 (ENSRNOG00000012258) #27	AABR07005506.1 (ENSRNOG00000025122)	Copb1 (ENSRNOG00000057623) #28	Psma1 (ENSRNOG00000011745) #29	LOC691427 (ENSRNOG00000066701)	Pde3b (ENSRNOG00000011417) #30	LOC102548890 (ENSRNOG00000062071)	Cyp2r1 (ENSRNOG00000011367) #33	Calca (ENSRNOG00000011130)	Insc (ENSRNOG00000024712)	Sox6 (ENSRNOG00000020514)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1662	Ampd3 (ENSNGAG00000024339)	Rnf141 (ENSNGAG00000016007)	Lyve1 (ENSNGAG00000022991)	Irag1 (ENSNGAG00000017045) #7	Ctr9 (ENSNGAG00000023664) #9	Eif4g2 (ENSNGAG00000024067) #10	ENSNGAG00000014324 #11	Galnt18 (ENSNGAG00000024177) #12	Usp47 (ENSNGAG00000021678) #14	Dkk3 (ENSNGAG00000006320) #15	Mical2 (ENSNGAG00000020678) #18	ENSNGAG00000005767	Parva (ENSNGAG00000022660) #19	Tead1 (ENSNGAG00000023367)	Rassf10 (ENSNGAG00000023204) #21	Arntl (ENSNGAG00000015200) #22	Btbd10 (ENSNGAG00000023695) #23	Pth (ENSNGAG00000023725) #24	Far1 (ENSNGAG00000024267) #25	Spon1 (ENSNGAG00000020103) #26	Rras2 (ENSNGAG00000001129) #27	Copb1 (ENSNGAG00000021457) #28	Psma1 (ENSNGAG00000023475) #29	Pde3b (ENSNGAG00000023861) #30	Cyp2r1 (ENSNGAG00000022618) #33	Calca (ENSNGAG00000016407)	Calcb (ENSNGAG00000023192) #37	Insc (ENSNGAG00000024094)	Sox6 (ENSNGAG00000007557)	1110004F10Rik (ENSNGAG00000022996)	Plekha7 (ENSNGAG00000022048)
Lesser Egyptian jerboa	MODERN SPECIES	43	Lyve1 (ENSJJAG00000018545)	Irag1 (ENSJJAG00000013023) #7	Ctr9 (ENSJJAG00000003972) #9	ENSJJAG00000006637	ENSJJAG00000021142 #10	ENSJJAG00000011119	ENSJJAG00000011627	Galnt18 (ENSJJAG00000021987) #12	Usp47 (ENSJJAG00000022599) #14	Dkk3 (ENSJJAG00000013289) #15	Mical2 (ENSJJAG00000021294) #18	ENSJJAG00000022447	Parva (ENSJJAG00000013058) #19	Tead1 (ENSJJAG00000020173)	Rassf10 (ENSJJAG00000013526) #21	Arntl (ENSJJAG00000018760) #22	ENSJJAG00000021998 #23	Pth (ENSJJAG00000020801) #24	Far1 (ENSJJAG00000023677) #25	Spon1 (ENSJJAG00000021081) #26	Rras2 (ENSJJAG00000023091) #27	Copb1 (ENSJJAG00000013738) #28	Psma1 (ENSJJAG00000016996) #29	Pde3b (ENSJJAG00000003122) #30	Cyp2r1 (ENSJJAG00000007428) #33	ENSJJAG00000009221	Calca (ENSJJAG00000007984)	Calcb (ENSJJAG00000009837) #37	Insc (ENSJJAG00000008221)	Sox6 (ENSJJAG00000019247)	ENSJJAG00000018380
Kangaroo rat	MODERN SPECIES	432	Ampd3 (ENSDORG00000016275)	Rnf141 (ENSDORG00000024444)	Lyve1 (ENSDORG00000009830)	Irag1 (ENSDORG00000009831) #7	Ctr9 (ENSDORG00000000017) #9	Eif4g2 (ENSDORG00000014967) #10	ENSDORG00000026892 #11	Galnt18 (ENSDORG00000005508) #12	Usp47 (ENSDORG00000005068) #14	ENSDORG00000005271 #15	Mical2 (ENSDORG00000008186) #18	ENSDORG00000008188	Parva (ENSDORG00000003678) #19	Tead1 (ENSDORG00000013529)	Rassf10 (ENSDORG00000023532) #21	Arntl (ENSDORG00000015539) #22	Btbd10 (ENSDORG00000015540) #23	Pth (ENSDORG00000000729) #24
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d.o.a.b #25	ENSGT00390000006367.d.o.b #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.x #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.g
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000043311	CTR9 (ENSHGLG00000004887) #9	EIF4G2 (ENSHGLG00000007052) #10	ZBED5 (ENSHGLG00000048847) #11	ENSHGLG00000036906	ENSHGLG00000032922	GALNT18 (ENSHGLG00000016517) #12	ENSHGLG00000035597	USP47 (ENSHGLG00000016557) #14	DKK3 (ENSHGLG00000004013) #15	ENSHGLG00000037120	ENSHGLG00000004319 #18	PARVA (ENSHGLG00000010035) #19	TEAD1 (ENSHGLG00000010909)	RASSF10 (ENSHGLG00000033814) #21	BMAL1 (ENSHGLG00000011181) #22	ENSHGLG00000017597 #23	PTH (ENSHGLG00000008594) #24	ENSHGLG00000034622	ENSHGLG00000033619	FAR1 (ENSHGLG00000009052) #25	ENSHGLG00000004770	SPON1 (ENSHGLG00000010146) #26	ENSHGLG00000005525 #27	COPB1 (ENSHGLG00000006967) #28	PSMA1 (ENSHGLG00000008245) #29	PDE3B (ENSHGLG00000004812) #30	CYP2R1 (ENSHGLG00000006296) #33	CALCA (ENSHGLG00000049679)	CALCB (ENSHGLG00000007698) #37	INSC (ENSHGLG00000012231)
Hystricomorpha_a	ANCESTRAL SPECIES	47	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d.o.a.b #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.x #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267.p #37	ENSGT00940000156267.o #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.g	ENSGT00940000155817.a.a
Guinea pig	MODERN SPECIES	67	RNF141 (ENSCPOG00000037000)	LYVE1 (ENSCPOG00000030456)	IRAG1 (ENSCPOG00000022784) #7	CTR9 (ENSCPOG00000009018) #9	EIF4G2 (ENSCPOG00000009036) #10	ZBED5 (ENSCPOG00000031247) #11	GALNT18 (ENSCPOG00000006859) #12	USP47 (ENSCPOG00000006461) #14	DKK3 (ENSCPOG00000006479) #15	MICAL2 (ENSCPOG00000003493) #18	ENSCPOG00000003851	PARVA (ENSCPOG00000003322) #19	ENSCPOG00000032772	TEAD1 (ENSCPOG00000001830)	RASSF10 (ENSCPOG00000003185) #21	BMAL1 (ENSCPOG00000008795) #22	ENSCPOG00000024984 #23	PTH (ENSCPOG00000003894) #24	ENSCPOG00000002654 #25	SPON1 (ENSCPOG00000001095) #26	RRAS2 (ENSCPOG00000033943) #27	COPB1 (ENSCPOG00000015221) #28	PSMA1 (ENSCPOG00000015226) #29	PDE3B (ENSCPOG00000014511) #30	CYP2R1 (ENSCPOG00000015305) #33	ENSCPOG00000009939 #37	ENSCPOG00000034508 #37	INSC (ENSCPOG00000009748)	SOX6 (ENSCPOG00000012090)	C11orf58 (ENSCPOG00000038571)	PLEKHA7 (ENSCPOG00000006974)
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d.o.a.b #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.x #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267.p #37	ENSGT00940000156267.o #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000171813	ENSGT00390000000687.g
Long-tailed chinchilla	MODERN SPECIES	121	AMPD3 (ENSCLAG00000017025)	RNF141 (ENSCLAG00000017159)	LYVE1 (ENSCLAG00000016806)	IRAG1 (ENSCLAG00000016879) #7	CTR9 (ENSCLAG00000016918) #9	EIF4G2 (ENSCLAG00000016511) #10	ZBED5 (ENSCLAG00000017987) #11	GALNT18 (ENSCLAG00000016928) #12	USP47 (ENSCLAG00000016904) #14	DKK3 (ENSCLAG00000017171) #15	MICAL2 (ENSCLAG00000016778) #18	ENSCLAG00000017336	PARVA (ENSCLAG00000015783) #19	TEAD1 (ENSCLAG00000016810)	RASSF10 (ENSCLAG00000018114) #21	BMAL1 (ENSCLAG00000017239) #22	BTBD10 (ENSCLAG00000017057) #23	PTH (ENSCLAG00000017158) #24	ENSCLAG00000017019 #25	SPON1 (ENSCLAG00000017261) #26	ENSCLAG00000016764	RRAS2 (ENSCLAG00000017168) #27	COPB1 (ENSCLAG00000015805) #28	PSMA1 (ENSCLAG00000016167) #29	PDE3B (ENSCLAG00000016912) #30	CYP2R1 (ENSCLAG00000016825) #33	ENSCLAG00000016987 #37	ENSCLAG00000017178 #37	INSC (ENSCLAG00000017184)	SOX6 (ENSCLAG00000016824)	ENSCLAG00000016704
Degu	MODERN SPECIES	108	CTR9 (ENSODEG00000007462) #9	ENSODEG00000008998 #10	ZBED5 (ENSODEG00000019517) #11	GALNT18 (ENSODEG00000008436) #12	ENSODEG00000019430	ENSODEG00000007966	USP47 (ENSODEG00000009709) #14	DKK3 (ENSODEG00000010578) #15	MICAL2 (ENSODEG00000007747) #18	ENSODEG00000009261	PARVA (ENSODEG00000010068) #19	ENSODEG00000008361	TEAD1 (ENSODEG00000008592)	RASSF10 (ENSODEG00000020043) #21	ENSODEG00000007743	BMAL1 (ENSODEG00000008489) #22	BTBD10 (ENSODEG00000009711) #23	PTH (ENSODEG00000009020) #24	FAR1 (ENSODEG00000008134) #25	SPON1 (ENSODEG00000010476) #26	ENSODEG00000010498 #27	ENSODEG00000008175	COPB1 (ENSODEG00000008339) #28	ENSODEG00000009349 #29	PDE3B (ENSODEG00000008884) #30	CYP2R1 (ENSODEG00000008305) #33	ENSODEG00000010275 #37	ENSODEG00000019671	ENSODEG00000009712 #37	INSC (ENSODEG00000008548)	SOX6 (ENSODEG00000008432)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Marmotini	ANCESTRAL SPECIES	22	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Marmotini_b	ANCESTRAL SPECIES	61	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Arctic ground squirrel	MODERN SPECIES	161	AMPD3 (ENSUPAG00010016308)	RNF141 (ENSUPAG00010016286)	LYVE1 (ENSUPAG00010016275)	IRAG1 (ENSUPAG00010016208) #7	CTR9 (ENSUPAG00010016173) #9	EIF4G2 (ENSUPAG00010016127) #10	ZBED5 (ENSUPAG00010016123) #11	GALNT18 (ENSUPAG00010016098) #12	USP47 (ENSUPAG00010016001) #14	DKK3 (ENSUPAG00010015990) #15	MICAL2 (ENSUPAG00010015862) #18	ENSUPAG00010015849	PARVA (ENSUPAG00010015787) #19	TEAD1 (ENSUPAG00010015679)	RASSF10 (ENSUPAG00010015667) #21	BMAL1 (ENSUPAG00010015313) #22	BTBD10 (ENSUPAG00010015250) #23	PTH (ENSUPAG00010015241) #24	FAR1 (ENSUPAG00010015186) #25	SPON1 (ENSUPAG00010015160) #26	RRAS2 (ENSUPAG00010015141) #27
Squirrel	MODERN SPECIES	128	AMPD3 (ENSSTOG00000027886)	ENSSTOG00000019740	LYVE1 (ENSSTOG00000013581)	IRAG1 (ENSSTOG00000013585) #7	CTR9 (ENSSTOG00000013594) #9	EIF4G2 (ENSSTOG00000013612) #10	ZBED5 (ENSSTOG00000013620) #11	GALNT18 (ENSSTOG00000016193) #12	USP47 (ENSSTOG00000004061) #14	DKK3 (ENSSTOG00000004100) #15	MICAL2 (ENSSTOG00000004626) #18	ENSSTOG00000024040	PARVA (ENSSTOG00000004676) #19	TEAD1 (ENSSTOG00000013115)	RASSF10 (ENSSTOG00000028823) #21	BMAL1 (ENSSTOG00000022144) #22	BTBD10 (ENSSTOG00000005753) #23	PTH (ENSSTOG00000026619) #24	FAR1 (ENSSTOG00000006190) #25	SPON1 (ENSSTOG00000029199) #26	RRAS2 (ENSSTOG00000022169) #27	COPB1 (ENSSTOG00000006213) #28	PSMA1 (ENSSTOG00000006270) #29	PDE3B (ENSSTOG00000016111) #30	CYP2R1 (ENSSTOG00000016403) #33	CALCA (ENSSTOG00000003844)	CALCB (ENSSTOG00000012372) #37	INSC (ENSSTOG00000012376)	SOX6 (ENSSTOG00000013609)	C11orf58 (ENSSTOG00000001419)	PLEKHA7 (ENSSTOG00000001423)
Alpin marmot	MODERN SPECIES	3	LYVE1 (ENSMMMG00000000826)	IRAG1 (ENSMMMG00000000852) #7	CTR9 (ENSMMMG00000000956) #9	EIF4G2 (ENSMMMG00000001012) #10	ENSMMMG00000001117	ZBED5 (ENSMMMG00000001126) #11	ENSMMMG00000001135	GALNT18 (ENSMMMG00000001161) #12	USP47 (ENSMMMG00000001225) #14	DKK3 (ENSMMMG00000001456) #15	MICAL2 (ENSMMMG00000001490) #18	ENSMMMG00000001603	PARVA (ENSMMMG00000001624) #19	TEAD1 (ENSMMMG00000001794)	RASSF10 (ENSMMMG00000002476) #21	BMAL1 (ENSMMMG00000002502) #22	BTBD10 (ENSMMMG00000002760) #23	PTH (ENSMMMG00000002796) #24	FAR1 (ENSMMMG00000002814) #25	SPON1 (ENSMMMG00000002900) #26	ENSMMMG00000002936	ENSMMMG00000002944 #27	ENSMMMG00000002957 #27	ENSMMMG00000002961	COPB1 (ENSMMMG00000002978) #28	PSMA1 (ENSMMMG00000003002) #29	PDE3B (ENSMMMG00000003034) #30	CYP2R1 (ENSMMMG00000003218) #33	CALCA (ENSMMMG00000003285)	CALCB (ENSMMMG00000003306) #37	INSC (ENSMMMG00000003331)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005012508	CTR9 (ENSSVLG00005012431) #9	ENSSVLG00005012340 #10	ZBED5 (ENSSVLG00005012301) #11	ENSSVLG00005012285	ENSSVLG00005012265	GALNT18 (ENSSVLG00005012194) #12	USP47 (ENSSVLG00005011470) #14	DKK3 (ENSSVLG00005011338) #15	MICAL2 (ENSSVLG00005011268) #18	ENSSVLG00005011151	ENSSVLG00005011006 #19	ENSSVLG00005010968	TEAD1 (ENSSVLG00005010836)	RASSF10 (ENSSVLG00005010782) #21	BMAL1 (ENSSVLG00005010226) #22	ENSSVLG00005010129 #23	PTH (ENSSVLG00005010094) #24	FAR1 (ENSSVLG00005010034) #25	SPON1 (ENSSVLG00005009915) #26	ENSSVLG00005009856 #27	ENSSVLG00005009821 #28	PSMA1 (ENSSVLG00005009698) #29	ENSSVLG00005009657	ENSSVLG00005009633	ENSSVLG00005009603	PDE3B (ENSSVLG00005009340) #30	CYP2R1 (ENSSVLG00005009273) #33	CALCA (ENSSVLG00005009221)	CALCB (ENSSVLG00005009182) #37	INSC (ENSSVLG00005008947)
Lagomorpha	ANCESTRAL SPECIES	72	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511
Rabbit	MODERN SPECIES		IRAG1 (ENSOCUG00000010773) #7	CTR9 (ENSOCUG00000013302) #9	EIF4G2 (ENSOCUG00000013326) #10	ENSOCUG00000027743	GALNT18 (ENSOCUG00000015212) #12	ENSOCUG00000036590	ENSOCUG00000033724	USP47 (ENSOCUG00000004832) #14	DKK3 (ENSOCUG00000004841) #15	MICAL2 (ENSOCUG00000001299) #18	ENSOCUG00000001302	PARVA (ENSOCUG00000013101) #19	TEAD1 (ENSOCUG00000007955)	RASSF10 (ENSOCUG00000026389) #21	BTBD10 (ENSOCUG00000005952) #23	BMAL1 (ENSOCUG00000005940) #22	PTH (ENSOCUG00000005469) #24	FAR1 (ENSOCUG00000004336) #25	SPON1 (ENSOCUG00000011350) #26	RRAS2 (ENSOCUG00000011362) #27	ENSOCUG00000033417	COPB1 (ENSOCUG00000000432) #28	PSMA1 (ENSOCUG00000000439) #29	PDE3B (ENSOCUG00000007719) #30	CYP2R1 (ENSOCUG00000021933) #33	CALCA (ENSOCUG00000002452)	ENSOCUG00000021599	CALCB (ENSOCUG00000003076) #37	INSC (ENSOCUG00000003080)	PTPN5 (ENSOCUG00000009923)	ENSOCUG00000008648
Pika	MODERN SPECIES	1221																ENSOPRG00000004853 #22	ENSOPRG00000004890 #23
Tree shrew	MODERN SPECIES	1510																BMAL1 (ENSTBEG00000017387) #22
Primates	ANCESTRAL SPECIES		ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Haplorrhini	ANCESTRAL SPECIES		ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Simiiformes	ANCESTRAL SPECIES		ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000157523.a #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000157523.a #22
Marmoset	MODERN SPECIES	2	CTR9 (ENSCJAG00000010795) #9	EIF4G2 (ENSCJAG00000010633) #10	ZBED5 (ENSCJAG00000010619) #11	ENSCJAG00000021962	ENSCJAG00000039717	GALNT18 (ENSCJAG00000010607) #12	ENSCJAG00000072959	USP47 (ENSCJAG00000010537) #14	DKK3 (ENSCJAG00000010506) #15	ENSCJAG00000010368 #18	PARVA (ENSCJAG00000010314) #19	ENSCJAG00000052611	TEAD1 (ENSCJAG00000010263)	ENSCJAG00000072498	RASSF10 (ENSCJAG00000085759) #21	BMAL1 (ENSCJAG00000010162) #22	BTBD10 (ENSCJAG00000010121) #23	PTH (ENSCJAG00000010117) #24	ENSCJAG00000076330	ENSCJAG00000070220	FAR1 (ENSCJAG00000010077) #25	SPON1 (ENSCJAG00000010055) #26	ENSCJAG00000040842 #27	ENSCJAG00000046068	COPB1 (ENSCJAG00000038149) #28	PSMA1 (ENSCJAG00000009850) #29	ENSCJAG00000082675	ENSCJAG00000086676	PDE3B (ENSCJAG00000009800) #30	CYP2R1 (ENSCJAG00000009776) #33	ENSCJAG00000075982
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000157523.a #22
Capuchin	MODERN SPECIES	944																ENSCCAG00000023328 #22
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780.a #18	ENSGT00940000162628	ENSGT00940000158780.b #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523.b #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d.p #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.q.b.a.a #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.v	ENSGT00940000153272.a.b.o.b.a
Cebidae	ANCESTRAL SPECIES		ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780.a #18	ENSGT00940000162628	ENSGT00940000158780.b #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523.b #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d.p #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.q.b.a.a #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.v	ENSGT00940000153272.a.b.o.b.a
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780.a #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523.b #22	ENSGT00390000007975.a.k #23	ENSGT00390000018603 #24	ENSGT00390000006367.d.p #25	ENSGT00940000154910.b.b #26	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.v	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687.u	ENSGT00940000155817.a.a
Bolivian squirrel monkey	MODERN SPECIES	42	CTR9 (ENSSBOG00000032978) #9	EIF4G2 (ENSSBOG00000026537) #10	ZBED5 (ENSSBOG00000017085) #11	GALNT18 (ENSSBOG00000026966) #12	USP47 (ENSSBOG00000031997) #14	DKK3 (ENSSBOG00000026748) #15	MICAL2 (ENSSBOG00000016986) #18	ENSSBOG00000033370	ENSSBOG00000021582	PARVA (ENSSBOG00000022244) #19	ENSSBOG00000028604	ENSSBOG00000024037	ENSSBOG00000014534	TEAD1 (ENSSBOG00000016687)	RASSF10 (ENSSBOG00000018129) #21	BMAL1 (ENSSBOG00000031375) #22	ENSSBOG00000032795 #23	PTH (ENSSBOG00000031787) #24	ENSSBOG00000032346 #25	SPON1 (ENSSBOG00000033038) #26	ENSSBOG00000014032	RRAS2 (ENSSBOG00000031627) #27	ENSSBOG00000016009	COPB1 (ENSSBOG00000034691) #28	ENSSBOG00000034107 #29	PDE3B (ENSSBOG00000022041) #30	ENSSBOG00000020446	CYP2R1 (ENSSBOG00000025157) #33	ENSSBOG00000032369 #37	CALCB (ENSSBOG00000034921) #37	INSC (ENSSBOG00000010393)
Capuchin	MODERN SPECIES	39	LAT (ENSCCAG00000029693)	SBK1 (ENSCCAG00000030783)	XPO6 (ENSCCAG00000036360)	GSG1L (ENSCCAG00000031700)	KATNIP (ENSCCAG00000027874)	GALNT18 (ENSCCAG00000034911) #12	USP47 (ENSCCAG00000036809) #14	DKK3 (ENSCCAG00000023063) #15	MICAL2 (ENSCCAG00000024846) #18	ENSCCAG00000024252	PARVA (ENSCCAG00000026534) #19	ENSCCAG00000011049	ENSCCAG00000030013	TEAD1 (ENSCCAG00000030647)	RASSF10 (ENSCCAG00000020233) #21	ARNTL (ENSCCAG00000027938) #22	BTBD10 (ENSCCAG00000035534) #23	PTH (ENSCCAG00000032557) #24	ENSCCAG00000024494 #25	SPON1 (ENSCCAG00000035761) #26	ENSCCAG00000022670	RRAS2 (ENSCCAG00000036972) #27	ENSCCAG00000031612	COPB1 (ENSCCAG00000024190) #28	PSMA1 (ENSCCAG00000032886) #29	PDE3B (ENSCCAG00000006518) #30	ENSCCAG00000035274	CYP2R1 (ENSCCAG00000020089) #33	ENSCCAG00000022131 #37	CALCB (ENSCCAG00000036279) #37	INSC (ENSCCAG00000028591)
Mas night monkey	MODERN SPECIES	830	RNF141 (ENSANAG00000026865)	LYVE1 (ENSANAG00000034004)	IRAG1 (ENSANAG00000029417) #7	CTR9 (ENSANAG00000038032) #9	ENSANAG00000036301 #10	ZBED5 (ENSANAG00000015984) #11	GALNT18 (ENSANAG00000025486) #12	USP47 (ENSANAG00000033772) #14	DKK3 (ENSANAG00000035069) #15	MICAL2 (ENSANAG00000037113) #18	ENSANAG00000037762	PARVA (ENSANAG00000034235) #19	ENSANAG00000028040	TEAD1 (ENSANAG00000027729)	RASSF10 (ENSANAG00000016577) #21	BMAL1 (ENSANAG00000007619) #22	BTBD10 (ENSANAG00000019763) #23	PTH (ENSANAG00000023657) #24	ENSANAG00000023814 #25	SPON1 (ENSANAG00000021897) #26	RRAS2 (ENSANAG00000020797) #27	COPB1 (ENSANAG00000022440) #28	ENSANAG00000024281 #29	PDE3B (ENSANAG00000021980) #30	ENSANAG00000029911	CYP2R1 (ENSANAG00000029148) #33	ENSANAG00000028771 #37	CALCB (ENSANAG00000026224) #37	INSC (ENSANAG00000024858)	ENSANAG00000028387	SOX6 (ENSANAG00000029702)
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00550000076414	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687
Gibbon	MODERN SPECIES	5	RNF141 (ENSNLEG00000017598)	LYVE1 (ENSNLEG00000017602)	IRAG1 (ENSNLEG00000017605) #7	CTR9 (ENSNLEG00000017616) #9	EIF4G2 (ENSNLEG00000017628) #10	ZBED5 (ENSNLEG00000017642) #11	ENSNLEG00000029070	GALNT18 (ENSNLEG00000017643) #12	ENSNLEG00000018179	USP47 (ENSNLEG00000017652) #14	DKK3 (ENSNLEG00000017663) #15	MICAL2 (ENSNLEG00000017665) #18	ENSNLEG00000017667	PARVA (ENSNLEG00000017668) #19	TEAD1 (ENSNLEG00000017672)	BMAL1 (ENSNLEG00000017674) #22	BTBD10 (ENSNLEG00000017691) #23	PTH (ENSNLEG00000017694) #24	FAR1 (ENSNLEG00000017695) #25	SPON1 (ENSNLEG00000017696) #26	RRAS2 (ENSNLEG00000017700) #27	COPB1 (ENSNLEG00000017703) #28	PSMA1 (ENSNLEG00000028235) #29	ENSNLEG00000017707	ENSNLEG00000035459	ENSNLEG00000017708 #30	CYP2R1 (ENSNLEG00000017710) #33	ENSNLEG00000035959	CALCB (ENSNLEG00000017711) #37	INSC (ENSNLEG00000017712)	SOX6 (ENSNLEG00000017716)
Hominidae	ANCESTRAL SPECIES	1	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00550000076414	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687
Orangutan	MODERN SPECIES	2	SBF2 (ENSPPYG00000003492)	ADM (ENSPPYG00000003491)	AMPD3 (ENSPPYG00000037061)	RNF141 (ENSPPYG00000033223)	LYVE1 (ENSPPYG00000003488)	IRAG1 (ENSPPYG00000003487) #7	CTR9 (ENSPPYG00000003486) #9	EIF4G2 (ENSPPYG00000003485) #10	GALNT18 (ENSPPYG00000003481) #12	USP47 (ENSPPYG00000003479) #14	DKK3 (ENSPPYG00000003478) #15	ENSPPYG00000003477 #18	PARVA (ENSPPYG00000003476) #19	TEAD1 (ENSPPYG00000003475)	RASSF10 (ENSPPYG00000003474) #21	BMAL1 (ENSPPYG00000003473) #22	BTBD10 (ENSPPYG00000003472) #23	PTH (ENSPPYG00000003471) #24	FAR1 (ENSPPYG00000003470) #25	SPON1 (ENSPPYG00000003469) #26	ENSPPYG00000025912 #27	COPB1 (ENSPPYG00000003467) #28	PSMA1 (ENSPPYG00000003466) #29	PDE3B (ENSPPYG00000003464) #30	CYP2R1 (ENSPPYG00000003463) #33	ENSPPYG00000041260	CALCA (ENSPPYG00000025911)	CALCB (ENSPPYG00000003461) #37	INSC (ENSPPYG00000003460)	SOX6 (ENSPPYG00000003459)	C11H11orf58 (ENSPPYG00000003458)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00550000076414	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.p.a #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00390000017871.a	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a
Gorilla	MODERN SPECIES	2	LYVE1 (ENSGGOG00000027082)	IRAG1 (ENSGGOG00000007864) #7	CTR9 (ENSGGOG00000011435) #9	EIF4G2 (ENSGGOG00000012972) #10	ZBED5 (ENSGGOG00000027515) #11	ENSGGOG00000037061	GALNT18 (ENSGGOG00000005614) #12	ENSGGOG00000023364	USP47 (ENSGGOG00000009540) #14	DKK3 (ENSGGOG00000009557) #15	MICAL2 (ENSGGOG00000013027) #18	ENSGGOG00000013049	PARVA (ENSGGOG00000014652) #19	TEAD1 (ENSGGOG00000037572)	RASSF10 (ENSGGOG00000024816) #21	BMAL1 (ENSGGOG00000013211) #22	BTBD10 (ENSGGOG00000000246) #23	PTH (ENSGGOG00000024281) #24	FAR1 (ENSGGOG00000001180) #25	SPON1 (ENSGGOG00000012110) #26	RRAS2 (ENSGGOG00000004759) #27	COPB1 (ENSGGOG00000001412) #28	ENSGGOG00000001416 #29	ENSGGOG00000024577	PDE3B (ENSGGOG00000006999) #30	CYP2R1 (ENSGGOG00000004022) #33	CALCA (ENSGGOG00000014148)	CALCB (ENSGGOG00000000799) #37	INSC (ENSGGOG00000002992)	SOX6 (ENSGGOG00000010884)	ENSGGOG00000022363
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00550000076414	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.o #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00390000017871.a	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a
Human	MODERN SPECIES	2	AMPD3 (ENSG00000133805)	RNF141 (ENSG00000110315)	LYVE1 (ENSG00000133800)	IRAG1 (ENSG00000072952) #7	CTR9 (ENSG00000198730) #9	EIF4G2 (ENSG00000110321) #10	ZBED5 (ENSG00000236287) #11	GALNT18 (ENSG00000110328) #12	CSNK2A3 (ENSG00000254598)	USP47 (ENSG00000170242) #14	DKK3 (ENSG00000050165) #15	MICAL2 (ENSG00000133816) #18	PARVA (ENSG00000197702) #19	TEAD1 (ENSG00000187079)	RASSF10 (ENSG00000189431) #21	BMAL1 (ENSG00000133794) #22	BTBD10 (ENSG00000148925) #23	PTH (ENSG00000152266) #24	FAR1 (ENSG00000197601) #25	SPON1 (ENSG00000262655) #26	RRAS2 (ENSG00000133818) #27	COPB1 (ENSG00000129083) #28	PSMA1 (ENSG00000129084) #29	PDE3B (ENSG00000152270) #30	CYP2R1 (ENSG00000186104) #33	CALCB (ENSG00000175868) #37	CALCA (ENSG00000110680)	INSC (ENSG00000188487)	SOX6 (ENSG00000110693)	C11orf58 (ENSG00000110696)	PLEKHA7 (ENSG00000166689)
Pan	ANCESTRAL SPECIES	1	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00950000182891.a.a.b.a.b.b.b	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00550000076414	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328.p.a #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00390000017871.a	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a
Chimpanzee	MODERN SPECIES	2	LYVE1 (ENSPTRG00000003359)	IRAG1 (ENSPTRG00000003360) #7	CTR9 (ENSPTRG00000023779) #9	EIF4G2 (ENSPTRG00000003362) #10	ENSPTRG00000045860	ZBED5 (ENSPTRG00000040343) #11	GALNT18 (ENSPTRG00000003365) #12	ENSPTRG00000046226	USP47 (ENSPTRG00000003367) #14	DKK3 (ENSPTRG00000003368) #15	MICAL2 (ENSPTRG00000003370) #18	ENSPTRG00000003371	PARVA (ENSPTRG00000003373) #19	TEAD1 (ENSPTRG00000039896)	RASSF10 (ENSPTRG00000047122) #21	ARNTL (ENSPTRG00000003376) #22	BTBD10 (ENSPTRG00000003377) #23	PTH (ENSPTRG00000003379) #24	FAR1 (ENSPTRG00000024190) #25	SPON1 (ENSPTRG00000043466) #26	RRAS2 (ENSPTRG00000003383) #27	COPB1 (ENSPTRG00000003384) #28	PSMA1 (ENSPTRG00000003385) #29	ENSPTRG00000050651	PDE3B (ENSPTRG00000003386) #30	ENSPTRG00000049147	CYP2R1 (ENSPTRG00000003388) #33	CALCA (ENSPTRG00000003389)	CALCB (ENSPTRG00000003390) #37	INSC (ENSPTRG00000003391)	SOX6 (ENSPTRG00000003393)
Bonobo	MODERN SPECIES	2	LYVE1 (ENSPPAG00000040153)	IRAG1 (ENSPPAG00000010949) #7	CTR9 (ENSPPAG00000040037) #9	EIF4G2 (ENSPPAG00000028909) #10	ENSPPAG00000013179	ZBED5 (ENSPPAG00000014950) #11	GALNT18 (ENSPPAG00000040594) #12	ENSPPAG00000000576	USP47 (ENSPPAG00000005387) #14	DKK3 (ENSPPAG00000041882) #15	MICAL2 (ENSPPAG00000035586) #18	ENSPPAG00000028227	PARVA (ENSPPAG00000036535) #19	TEAD1 (ENSPPAG00000035086)	RASSF10 (ENSPPAG00000003028) #21	BMAL1 (ENSPPAG00000013788) #22	BTBD10 (ENSPPAG00000017421) #23	PTH (ENSPPAG00000029173) #24	FAR1 (ENSPPAG00000032349) #25	SPON1 (ENSPPAG00000038730) #26	ENSPPAG00000042848 #27	COPB1 (ENSPPAG00000037818) #28	ENSPPAG00000009245 #29	ENSPPAG00000026084	PDE3B (ENSPPAG00000001811) #30	CYP2R1 (ENSPPAG00000042738) #33	CALCA (ENSPPAG00000040307)	CALCB (ENSPPAG00000039474) #37	INSC (ENSPPAG00000039229)	SOX6 (ENSPPAG00000037103)	ENSPPAG00000035221
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00910000147143	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687
Rhinopithecus	ANCESTRAL SPECIES	256						ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00910000147143	ENSGT00950000182839.A.d #21	ENSGT01050000244941.A.q.a.a	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000008694.b.b.c.b	ENSGT00940000159460	ENSGT00940000156656	ENSGT00950000182803.B.d.a.i.a	ENSGT00950000183035.a.a	ENSGT00940000153558.b.i.b.a.b
Golden snub-nosed monkey	MODERN SPECIES	2666											TEAD1 (ENSRROG00000038144)	ENSRROG00000029938	RASSF10 (ENSRROG00000026716) #21	ENSRROG00000029905	ENSRROG00000040484	BMAL1 (ENSRROG00000036134) #22	BTBD10 (ENSRROG00000009070) #23	PTH (ENSRROG00000045148) #24	FAR1 (ENSRROG00000032752) #25	SPON1 (ENSRROG00000045521) #26	RRAS2 (ENSRROG00000044127) #27	ENSRROG00000035326	ENSRROG00000040457	COPB1 (ENSRROG00000035006) #28	PSMA1 (ENSRROG00000037748) #29	PDE3B (ENSRROG00000030993) #30	CYP2R1 (ENSRROG00000031651) #33	CALCA (ENSRROG00000038260)
Black snub-nosed monkey	MODERN SPECIES	687						GALNT18 (ENSRBIG00000028122) #12	USP47 (ENSRBIG00000029035) #14	DKK3 (ENSRBIG00000007853) #15	MICAL2 (ENSRBIG00000031181) #18	ENSRBIG00000038610	PARVA (ENSRBIG00000030988) #19	TEAD1 (ENSRBIG00000038939)	ENSRBIG00000035810	RASSF10 (ENSRBIG00000023732) #21	ENSRBIG00000039246	BMAL1 (ENSRBIG00000032761) #22	BTBD10 (ENSRBIG00000029469) #23	PTH (ENSRBIG00000021610) #24	FAR1 (ENSRBIG00000044909) #25	SPON1 (ENSRBIG00000026984) #26	ENSRBIG00000029894	RRAS2 (ENSRBIG00000033953) #27	ENSRBIG00000037045	ENSRBIG00000002418	ENSRBIG00000025999	COPB1 (ENSRBIG00000042522) #28	PSMA1 (ENSRBIG00000037598) #29	PDE3B (ENSRBIG00000033238) #30	CYP2R1 (ENSRBIG00000038224) #33	CALCA (ENSRBIG00000040435)	CALCB (ENSRBIG00000037886) #37
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00910000147143	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687
Vervet Monkey	MODERN SPECIES		AMPD3 (ENSCSAG00000004560)	RNF141 (ENSCSAG00000004565)	LYVE1 (ENSCSAG00000004570)	IRAG1 (ENSCSAG00000004576) #7	CTR9 (ENSCSAG00000004587) #9	EIF4G2 (ENSCSAG00000004613) #10	ZBED5 (ENSCSAG00000004621) #11	GALNT18 (ENSCSAG00000004622) #12	USP47 (ENSCSAG00000004651) #14	DKK3 (ENSCSAG00000004664) #15	MICAL2 (ENSCSAG00000004666) #18	ENSCSAG00000004672	PARVA (ENSCSAG00000004674) #19	TEAD1 (ENSCSAG00000004676)	RASSF10 (ENSCSAG00000019327) #21	BMAL1 (ENSCSAG00000004681) #22	BTBD10 (ENSCSAG00000004684) #23	PTH (ENSCSAG00000004688) #24	FAR1 (ENSCSAG00000004693) #25	SPON1 (ENSCSAG00000004699) #26	RRAS2 (ENSCSAG00000004707) #27	ENSCSAG00000019326	COPB1 (ENSCSAG00000004715) #28	ENSCSAG00000004718 #29	PDE3B (ENSCSAG00000004722) #30	CYP2R1 (ENSCSAG00000004727) #33	CALCA (ENSCSAG00000004733)	CALCB (ENSCSAG00000004739) #37	INSC (ENSCSAG00000004745)	SOX6 (ENSCSAG00000004751)	ENSCSAG00000019325
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00740000115534.a.b.f.a.b.m.a	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00910000147143	ENSGT00950000182839.A.d #21	ENSGT01050000244941.A.q.a.a	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000009405.b.c.a.a.d.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00910000148600	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B
Macaca	ANCESTRAL SPECIES	2	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00740000115534.a.b.f.a.b.m.a	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT01050000244941.A.q.a.a	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000009405.b.c.a.a.d.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00910000148600	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00740000115534.a.b.f.a.b.m.a	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000009405.b.c.a.a.d.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00940000153272.a.b.o.b.a
Rhesus	MODERN SPECIES	5	IRAG1 (ENSMMUG00000015792) #7	CTR9 (ENSMMUG00000011438) #9	EIF4G2 (ENSMMUG00000011436) #10	ZBED5 (ENSMMUG00000006652) #11	ENSMMUG00000060566	ENSMMUG00000060286	GALNT18 (ENSMMUG00000004777) #12	USP47 (ENSMMUG00000022860) #14	DKK3 (ENSMMUG00000022862) #15	ENSMMUG00000058635	MICAL2 (ENSMMUG00000020953) #18	ENSMMUG00000040961	PARVA (ENSMMUG00000020956) #19	TEAD1 (ENSMMUG00000010875)	RASSF10 (ENSMMUG00000031015) #21	ARNTL (ENSMMUG00000009690) #22	BTBD10 (ENSMMUG00000009695) #23	PTH (ENSMMUG00000054213) #24	FAR1 (ENSMMUG00000011990) #25	SPON1 (ENSMMUG00000021914) #26	RRAS2 (ENSMMUG00000056680) #27	ENSMMUG00000060926	COPB1 (ENSMMUG00000016444) #28	PSMA1 (ENSMMUG00000016446) #29	PDE3B (ENSMMUG00000000759) #30	CYP2R1 (ENSMMUG00000000761) #33	CALCA (ENSMMUG00000062674)	CALCB (ENSMMUG00000020245) #37	INSC (ENSMMUG00000020246)	SOX6 (ENSMMUG00000002753)	ENSMMUG00000055212
Crab-eating macaque	MODERN SPECIES	5	RNF141 (ENSMFAG00000041777)	LYVE1 (ENSMFAG00000031520)	IRAG1 (ENSMFAG00000035351) #7	CTR9 (ENSMFAG00000045504) #9	EIF4G2 (ENSMFAG00000036500) #10	ZBED5 (ENSMFAG00000039310) #11	GALNT18 (ENSMFAG00000041231) #12	USP47 (ENSMFAG00000043486) #14	DKK3 (ENSMFAG00000043096) #15	ENSMFAG00000055053	MICAL2 (ENSMFAG00000003872) #18	ENSMFAG00000022828	PARVA (ENSMFAG00000042761) #19	TEAD1 (ENSMFAG00000031197)	ENSMFAG00000002071	BMAL1 (ENSMFAG00000034184) #22	ENSMFAG00000056904	ENSMFAG00000048535	BTBD10 (ENSMFAG00000000120) #23	PTH (ENSMFAG00000032854) #24	FAR1 (ENSMFAG00000033108) #25	SPON1 (ENSMFAG00000045029) #26	RRAS2 (ENSMFAG00000003904) #27	ENSMFAG00000030330	COPB1 (ENSMFAG00000041022) #28	PSMA1 (ENSMFAG00000036829) #29	ENSMFAG00000056009	PDE3B (ENSMFAG00000043764) #30	CYP2R1 (ENSMFAG00000002337) #33	CALCA (ENSMFAG00000041791)	CALCB (ENSMFAG00000054288) #37
Pig-tailed macaque	MODERN SPECIES	131							USP47 (ENSMNEG00000043434) #14	DKK3 (ENSMNEG00000040813) #15	MICAL2 (ENSMNEG00000035003) #18	ENSMNEG00000038530	PARVA (ENSMNEG00000001559) #19	ENSMNEG00000040607	TEAD1 (ENSMNEG00000021469)	RASSF10 (ENSMNEG00000009578) #21	ENSMNEG00000028664	BMAL1 (ENSMNEG00000044126) #22	BTBD10 (ENSMNEG00000039532) #23	PTH (ENSMNEG00000045093) #24	FAR1 (ENSMNEG00000027354) #25	SPON1 (ENSMNEG00000035429) #26	RRAS2 (ENSMNEG00000040502) #27	ENSMNEG00000017091	COPB1 (ENSMNEG00000041177) #28	PSMA1 (ENSMNEG00000005235) #29	PDE3B (ENSMNEG00000045013) #30	CYP2R1 (ENSMNEG00000036249) #33	ENSMNEG00000015626	CALCA (ENSMNEG00000041856)	CALCB (ENSMNEG00000033056) #37	INSC (ENSMNEG00000041648)	SOX6 (ENSMNEG00000015482)
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00740000115534.a.b.f.a.b.m.a	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00910000147143	ENSGT00950000182839.A.d #21	ENSGT01050000244941.A.q.a.a	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000009405.b.c.a.a.d.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00910000148600	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B
Olive baboon	MODERN SPECIES	3	EIF4G2 (ENSPANG00000005223) #10	ZBED5 (ENSPANG00000030500) #11	ENSPANG00000050360	ENSPANG00000045618	GALNT18 (ENSPANG00000022855) #12	ENSPANG00000041769	ENSPANG00000041841	USP47 (ENSPANG00000025707) #14	DKK3 (ENSPANG00000019481) #15	MICAL2 (ENSPANG00000013189) #18	PARVA (ENSPANG00000012056) #19	ENSPANG00000014772	TEAD1 (ENSPANG00000007045)	RASSF10 (ENSPANG00000039259) #21	ENSPANG00000006030	BMAL1 (ENSPANG00000006538) #22	BTBD10 (ENSPANG00000010377) #23	PTH (ENSPANG00000021901) #24	FAR1 (ENSPANG00000026208) #25	SPON1 (ENSPANG00000002502) #26	RRAS2 (ENSPANG00000009252) #27	ENSPANG00000049552	ENSPANG00000002060	COPB1 (ENSPANG00000019450) #28	PSMA1 (ENSPANG00000016448) #29	PDE3B (ENSPANG00000014364) #30	CYP2R1 (ENSPANG00000005224) #33	CALCA (ENSPANG00000038842)	INSC (ENSPANG00000010410)	SOX6 (ENSPANG00000025558)	ENSPANG00000013057
Cercopithecinae_d	ANCESTRAL SPECIES	99	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00910000147143	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a.i #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000009405.b.c.a.a.d.a.b	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00910000148600	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B
Sooty mangabey	MODERN SPECIES	235	IRAG1 (ENSCATG00000039606) #7	CTR9 (ENSCATG00000033343) #9	EIF4G2 (ENSCATG00000040907) #10	GALNT18 (ENSCATG00000008794) #12	USP47 (ENSCATG00000034539) #14	DKK3 (ENSCATG00000029806) #15	MICAL2 (ENSCATG00000045145) #18	ENSCATG00000000895	PARVA (ENSCATG00000041795) #19	ENSCATG00000018831	TEAD1 (ENSCATG00000043730)	ENSCATG00000015452	RASSF10 (ENSCATG00000023676) #21	ENSCATG00000035301	ENSCATG00000031725	BMAL1 (ENSCATG00000014877) #22	BTBD10 (ENSCATG00000020038) #23	PTH (ENSCATG00000011856) #24	FAR1 (ENSCATG00000039474) #25	SPON1 (ENSCATG00000031426) #26	RRAS2 (ENSCATG00000043382) #27	ENSCATG00000005978	COPB1 (ENSCATG00000040822) #28	PSMA1 (ENSCATG00000014932) #29	PDE3B (ENSCATG00000038221) #30	CYP2R1 (ENSCATG00000039518) #33	ENSCATG00000042154	CALCA (ENSCATG00000027244)	CALCB (ENSCATG00000041190) #37	INSC (ENSCATG00000035904)	SOX6 (ENSCATG00000040489)
Drill	MODERN SPECIES	234																BMAL1 (ENSMLEG00000040074) #22	BTBD10 (ENSMLEG00000031966) #23	PTH (ENSMLEG00000035738) #24	FAR1 (ENSMLEG00000031734) #25
Tarsier	MODERN SPECIES	5840																ARNTL (ENSTSYG00000000577) #22	BTBD10 (ENSTSYG00000000445) #23	PTH (ENSTSYG00000026442) #24
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675.h.a #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	27	AMPD3 (ENSMICG00000009437)	RNF141 (ENSMICG00000044602)	LYVE1 (ENSMICG00000008609)	IRAG1 (ENSMICG00000008630) #7	CTR9 (ENSMICG00000017459) #9	EIF4G2 (ENSMICG00000017460) #10	ZBED5 (ENSMICG00000006735) #11	GALNT18 (ENSMICG00000017614) #12	USP47 (ENSMICG00000028952) #14	DKK3 (ENSMICG00000004271) #15	MICAL2 (ENSMICG00000004280) #18	ENSMICG00000003062	PARVA (ENSMICG00000003066) #19	TEAD1 (ENSMICG00000007178)	ENSMICG00000036945	ENSMICG00000001229 #22	BTBD10 (ENSMICG00000001232) #23	PTH (ENSMICG00000042670) #24	ENSMICG00000036333	FAR1 (ENSMICG00000035920) #25	SPON1 (ENSMICG00000013787) #26	ENSMICG00000044590	RRAS2 (ENSMICG00000026746) #27	COPB1 (ENSMICG00000010919) #28	ENSMICG00000010934 #29	PDE3B (ENSMICG00000037786) #30	CYP2R1 (ENSMICG00000031499) #33	CALCA (ENSMICG00000036545)	CALCB (ENSMICG00000044384) #37	INSC (ENSMICG00000008907)	SOX6 (ENSMICG00000027413)
Mouse lemur	MODERN SPECIES	18	ENSMICG00000004020	KIAA1191 (ENSMICG00000037293)	ENSMICG00000036088	SIMC1 (ENSMICG00000015305)	ENSMICG00000028441	CPLX2 (ENSMICG00000047802)	HRH2 (ENSMICG00000003318)	ENSMICG00000030242	DRD1 (ENSMICG00000042729)	GRM7 (ENSMICG00000010596)	CNTN4 (ENSMICG00000016581)	IL5RA (ENSMICG00000046178)	TRNT1 (ENSMICG00000016615)	CRBN (ENSMICG00000016619)	LRRN1 (ENSMICG00000038690)	ENSMICG00000030917 #22	ENSMICG00000032203	SUMF1 (ENSMICG00000016631)	ITPR1 (ENSMICG00000004656)	BHLHE40 (ENSMICG00000043220)	ENSMICG00000029477	EDEM1 (ENSMICG00000000246)
Lemuriformes_a	ANCESTRAL SPECIES	24	ENSGT00910000148098	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675.h.a #10	ENSGT00940000162521 #11	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000162876	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Coquerels sifaka	MODERN SPECIES	591	AMPD3 (ENSPCOG00000020497)	RNF141 (ENSPCOG00000012151)	LYVE1 (ENSPCOG00000027751)	IRAG1 (ENSPCOG00000024269) #7	CTR9 (ENSPCOG00000014337) #9	EIF4G2 (ENSPCOG00000025142) #10	ZBED5 (ENSPCOG00000000863) #11	GALNT18 (ENSPCOG00000018132) #12	USP47 (ENSPCOG00000002132) #14	DKK3 (ENSPCOG00000014673) #15	ENSPCOG00000015120	MICAL2 (ENSPCOG00000022740) #18	ENSPCOG00000022798	PARVA (ENSPCOG00000025574) #19	TEAD1 (ENSPCOG00000025108)	BMAL1 (ENSPCOG00000023193) #22	BTBD10 (ENSPCOG00000021543) #23	PTH (ENSPCOG00000011541) #24	FAR1 (ENSPCOG00000027389) #25	SPON1 (ENSPCOG00000018088) #26	RRAS2 (ENSPCOG00000016892) #27	COPB1 (ENSPCOG00000022546) #28	ENSPCOG00000017306 #29	PDE3B (ENSPCOG00000022666) #30	CYP2R1 (ENSPCOG00000017738) #33	ENSPCOG00000014163 #37	CALCB (ENSPCOG00000025246) #37	INSC (ENSPCOG00000024807)	SOX6 (ENSPCOG00000008289)	C11orf58 (ENSPCOG00000012109)	ENSPCOG00000016080
Greater bamboo lemur	MODERN SPECIES	65	ENSPSMG00000021075	RNF141 (ENSPSMG00000021062)	LYVE1 (ENSPSMG00000021055)	IRAG1 (ENSPSMG00000020996) #7	CTR9 (ENSPSMG00000020817) #9	EIF4G2 (ENSPSMG00000020734) #10	ZBED5 (ENSPSMG00000020656) #11	GALNT18 (ENSPSMG00000020636) #12	ENSPSMG00000020597	USP47 (ENSPSMG00000020548) #14	DKK3 (ENSPSMG00000020378) #15	MICAL2 (ENSPSMG00000020339) #18	PARVA (ENSPSMG00000020260) #19	TEAD1 (ENSPSMG00000020188)	RASSF10 (ENSPSMG00000020131) #21	BMAL1 (ENSPSMG00000020096) #22	BTBD10 (ENSPSMG00000019992) #23	PTH (ENSPSMG00000019970) #24
Bushbaby	MODERN SPECIES	116	AMPD3 (ENSOGAG00000001761)	RNF141 (ENSOGAG00000001765)	LYVE1 (ENSOGAG00000001766)	IRAG1 (ENSOGAG00000001768) #7	CTR9 (ENSOGAG00000013884) #9	ENSOGAG00000027912 #10	GALNT18 (ENSOGAG00000013801) #12	USP47 (ENSOGAG00000005261) #14	DKK3 (ENSOGAG00000005265) #15	MICAL2 (ENSOGAG00000011909) #18	ENSOGAG00000029945	PARVA (ENSOGAG00000003339) #19	TEAD1 (ENSOGAG00000011380)	RASSF10 (ENSOGAG00000030263) #21	ENSOGAG00000027834	BMAL1 (ENSOGAG00000000736) #22	BTBD10 (ENSOGAG00000000739) #23	PTH (ENSOGAG00000000740) #24	FAR1 (ENSOGAG00000005064) #25	RRAS2 (ENSOGAG00000027655) #27	COPB1 (ENSOGAG00000011612) #28	PSMA1 (ENSOGAG00000011622) #29	PDE3B (ENSOGAG00000017127) #30	CYP2R1 (ENSOGAG00000006278) #33	ENSOGAG00000017129	ENSOGAG00000009052	INSC (ENSOGAG00000000628)	SOX6 (ENSOGAG00000005358)	C11orf58 (ENSOGAG00000025335)	PLEKHA7 (ENSOGAG00000013719)	RPS13 (ENSOGAG00000002128)
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Xenarthra	ANCESTRAL SPECIES	199															ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687.c	ENSGT00940000155817.a.a	ENSGT00390000017491.t.a	ENSGT00940000157813
Sloth	MODERN SPECIES	2624																BMAL1 (ENSCHOG00000000376) #22	BTBD10 (ENSCHOG00000000381) #23
Armadillo	MODERN SPECIES	2958													TEAD1 (ENSDNOG00000015235)	ENSDNOG00000032396	RASSF10 (ENSDNOG00000031556) #21	BMAL1 (ENSDNOG00000003841) #22	BTBD10 (ENSDNOG00000003854) #23	PTH (ENSDNOG00000003272) #24	ENSDNOG00000043297	FAR1 (ENSDNOG00000002552) #25	SPON1 (ENSDNOG00000011819) #26	ENSDNOG00000011828 #27	COPB1 (ENSDNOG00000018754) #28	ENSDNOG00000049634	PDE3B (ENSDNOG00000006062) #30	CYP2R1 (ENSDNOG00000025774) #33	ENSDNOG00000017915 #37	ENSDNOG00000018612 #37	INSC (ENSDNOG00000012392)	SOX6 (ENSDNOG00000004344)	ENSDNOG00000037449
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Tenrec	MODERN SPECIES	2942																BMAL1 (ENSETEG00000002641) #22	BTBD10 (ENSETEG00000002646) #23
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000162628	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000154910.b.b #26	ENSGT00940000155328 #27	ENSGT00390000005270 #28	ENSGT00550000074855 #29	ENSGT00940000159336 #30	ENSGT00940000158305 #33	ENSGT00940000156267 #37	ENSGT00940000162876	ENSGT00390000001511	ENSGT00940000156433.B	ENSGT00390000000687	ENSGT00940000155817.a.a
Elephant	MODERN SPECIES	209	ADM (ENSLAFG00000015431)	AMPD3 (ENSLAFG00000013883)	RNF141 (ENSLAFG00000013889)	LYVE1 (ENSLAFG00000013896)	IRAG1 (ENSLAFG00000013898) #7	CTR9 (ENSLAFG00000012801) #9	EIF4G2 (ENSLAFG00000012814) #10	GALNT18 (ENSLAFG00000014130) #12	USP47 (ENSLAFG00000004453) #14	DKK3 (ENSLAFG00000004463) #15	MICAL2 (ENSLAFG00000003577) #18	ENSLAFG00000026524	PARVA (ENSLAFG00000011464) #19	TEAD1 (ENSLAFG00000016484)	RASSF10 (ENSLAFG00000007284) #21	BMAL1 (ENSLAFG00000026673) #22	BTBD10 (ENSLAFG00000017180) #23	PTH (ENSLAFG00000028790) #24	FAR1 (ENSLAFG00000000971) #25	SPON1 (ENSLAFG00000002558) #26	RRAS2 (ENSLAFG00000002561) #27	COPB1 (ENSLAFG00000006159) #28	PSMA1 (ENSLAFG00000006165) #29	ENSLAFG00000027121	PDE3B (ENSLAFG00000008453) #30	CYP2R1 (ENSLAFG00000005356) #33	ENSLAFG00000003276 #37	ENSLAFG00000015843	INSC (ENSLAFG00000005686)	SOX6 (ENSLAFG00000002917)	C11orf58 (ENSLAFG00000007606)
Hyrax	MODERN SPECIES	2397																BMAL1 (ENSPCAG00000008256) #22	BTBD10 (ENSPCAG00000008334) #23
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000156507.f.b	ENSGT00950000183073.a.a.a	ENSGT00950000182718.B	ENSGT01100000263499.a.c.a.vb	ENSGT01100000263499.a.c.a.wb	ENSGT00530000063074.b.a	ENSGT00940000159533	ENSGT00940000158651	ENSGT00940000155663	ENSGT00950000183093.B	ENSGT00390000008184	ENSGT00940000156825
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000156507.f.b	ENSGT00950000183073.a.a.a	ENSGT00950000182718.B	ENSGT01100000263499.a.c.a.vb	ENSGT01100000263499.a.c.a.wb	ENSGT00530000063074.b.a	ENSGT00940000159533	ENSGT00940000158651	ENSGT00940000155663	ENSGT00950000183093.B	ENSGT00390000008184	ENSGT00940000156825
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000156507.f.b	ENSGT00950000183073.a.a.a	ENSGT00950000182718.B	ENSGT01100000263499.a.c.a.wb	ENSGT00530000063074.b.a	ENSGT00940000159533	ENSGT00940000158651	ENSGT00940000155663	ENSGT00950000183093.B	ENSGT00390000008184	ENSGT00940000156825	ENSGT00940000154963
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000156507.f.b	ENSGT00950000183073.a.a.a	ENSGT00950000182718.B	ENSGT01100000263499.a.c.a.wb	ENSGT00530000063074.b.a	ENSGT00940000159533	ENSGT00940000158651	ENSGT00940000155663	ENSGT00950000183093.B	ENSGT00390000008184	ENSGT00940000156825	ENSGT00940000154963
Common wonbat	MODERN SPECIES	608	ADM (ENSVURG00010004441)	AMPD3 (ENSVURG00010004404)	RNF141 (ENSVURG00010004381)	LYVE1 (ENSVURG00010004371)	IRAG1 (ENSVURG00010004352) #7	CTR9 (ENSVURG00010004315) #9	EIF4G2 (ENSVURG00010004281) #10	GALNT18 (ENSVURG00010004251) #12	USP47 (ENSVURG00010004197) #14	DKK3 (ENSVURG00010004174) #15	MICAL2 (ENSVURG00010004117) #18	ENSVURG00010004090	PARVA (ENSVURG00010004081) #19	TEAD1 (ENSVURG00010003998)	RASSF10 (ENSVURG00010003950) #21	BMAL1 (ENSVURG00010003866) #22	BTBD10 (ENSVURG00010003834) #23	ENSVURG00010003830 #24	FAR1 (ENSVURG00010003792) #25	ENSVURG00010003781	ENSVURG00010003770	ENSVURG00010003766	ENSVURG00010003763	ENSVURG00010003751	ZDHHC13 (ENSVURG00010003738)	CSRP3 (ENSVURG00010003729)	E2F8 (ENSVURG00010003709)	ENSVURG00010003665	ENSVURG00010003646	DBX1 (ENSVURG00010003630)	HTATIP2 (ENSVURG00010003615)
koala	MODERN SPECIES	93	SBF2 (ENSPCIG00000005981)	ADM (ENSPCIG00000005988)	AMPD3 (ENSPCIG00000023310)	RNF141 (ENSPCIG00000023312)	LYVE1 (ENSPCIG00000023314)	IRAG1 (ENSPCIG00000023321) #7	CTR9 (ENSPCIG00000023374) #9	EIF4G2 (ENSPCIG00000024888) #10	GALNT18 (ENSPCIG00000025287) #12	USP47 (ENSPCIG00000025349) #14	DKK3 (ENSPCIG00000025375) #15	MICAL2 (ENSPCIG00000025387) #18	PARVA (ENSPCIG00000025436) #19	TEAD1 (ENSPCIG00000025456)	RASSF10 (ENSPCIG00000025466) #21	BMAL1 (ENSPCIG00000026840) #22	BTBD10 (ENSPCIG00000026844) #23	ENSPCIG00000015738 #24	ENSPCIG00000015741	FAR1 (ENSPCIG00000015746) #25	ENSPCIG00000015755	EIF3F (ENSPCIG00000015758)	ENSPCIG00000020059	ENSPCIG00000032438	ENSPCIG00000023224	ZDHHC13 (ENSPCIG00000023225)	CSRP3 (ENSPCIG00000023226)	E2F8 (ENSPCIG00000023227)	ENSPCIG00000035465	ENSPCIG00000000951	DBX1 (ENSPCIG00000001103)
Wallaby	MODERN SPECIES	5564																ENSMEUG00000014927 #22
Tasmanian devil	MODERN SPECIES	5	ADM (ENSSHAG00000023302)	AMPD3 (ENSSHAG00000000856)	RNF141 (ENSSHAG00000002101)	LYVE1 (ENSSHAG00000003380)	IRAG1 (ENSSHAG00000004080) #7	CTR9 (ENSSHAG00000000556) #9	EIF4G2 (ENSSHAG00000003530) #10	GALNT18 (ENSSHAG00000008532) #12	USP47 (ENSSHAG00000012879) #14	DKK3 (ENSSHAG00000030448) #15	ENSSHAG00000014084 #18	PARVA (ENSSHAG00000015178) #19	ENSSHAG00000015630	TEAD1 (ENSSHAG00000031106)	RASSF10 (ENSSHAG00000029050) #21	BMAL1 (ENSSHAG00000017357) #22	BTBD10 (ENSSHAG00000022870) #23	ENSSHAG00000026721 #24	ENSSHAG00000017806 #25	ENSSHAG00000017881	ENSSHAG00000029587	ENSSHAG00000018110	ENSSHAG00000020743	ENSSHAG00000023746	ENSSHAG00000018284	ENSSHAG00000018331	E2F8 (ENSSHAG00000018372)	ENSSHAG00000028087	ENSSHAG00000008439	DBX1 (ENSSHAG00000011774)	HTATIP2 (ENSSHAG00000028422)
Opossum	MODERN SPECIES	4	RNF141 (ENSMODG00000008191)	LYVE1 (ENSMODG00000008209)	IRAG1 (ENSMODG00000008248) #7	CTR9 (ENSMODG00000008303) #9	EIF4G2 (ENSMODG00000008364) #10	GALNT18 (ENSMODG00000008440) #12	ENSMODG00000039348	USP47 (ENSMODG00000008494) #14	DKK3 (ENSMODG00000008513) #15	MICAL2 (ENSMODG00000038134) #18	ENSMODG00000008560	PARVA (ENSMODG00000008586) #19	ENSMODG00000050494	TEAD1 (ENSMODG00000008613)	RASSF10 (ENSMODG00000008625) #21	BMAL1 (ENSMODG00000008708) #22	BTBD10 (ENSMODG00000008728) #23	ENSMODG00000008738 #24	FAR1 (ENSMODG00000008824) #25	ENSMODG00000028753	EIF3F (ENSMODG00000008867)	ENSMODG00000008890	ENSMODG00000049672	ENSMODG00000039092	ZDHHC13 (ENSMODG00000008986)	CSRP3 (ENSMODG00000009011)	E2F8 (ENSMODG00000009029)	NAV2 (ENSMODG00000009072)	ENSMODG00000037360	DBX1 (ENSMODG00000009081)	HTATIP2 (ENSMODG00000009101)
Platypus	MODERN SPECIES	14	GAS2 (ENSOANG00000013127)	ENSOANG00000043692	LUZP2 (ENSOANG00000041544)	ENSOANG00000013128	ANO3 (ENSOANG00000013130)	ENSOANG00000013132	SLC5A12 (ENSOANG00000013134)	FIBIN (ENSOANG00000038281)	BBOX1 (ENSOANG00000013137)	ENSOANG00000042659	LGR4 (ENSOANG00000042956)	LIN7C (ENSOANG00000037769)	BDNF (ENSOANG00000036944)	KIF18A (ENSOANG00000015350)	METTL15 (ENSOANG00000015351)	BMAL1 (ENSOANG00000000503) #22	BTBD10 (ENSOANG00000050143) #23	ENSOANG00000012064 #25	ENSOANG00000020562	CYB5R2 (ENSOANG00000042335)	PPFIBP2 (ENSOANG00000012061)	ENSOANG00000012060	SYT9 (ENSOANG00000015132)	SPON1 (ENSOANG00000015133) #26	C11orf91 (ENSOANG00000039291)	ENSOANG00000015134	HIPK3 (ENSOANG00000015138)	CSTF3 (ENSOANG00000015140)	DEPDC7 (ENSOANG00000015142)	ENSOANG00000015143	PRRG4 (ENSOANG00000015144)
Sauria	ANCESTRAL SPECIES	3	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153216.a.a.d	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153216.a.a.d	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b
Archosauria	ANCESTRAL SPECIES	5	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402
Aves	ANCESTRAL SPECIES	2	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402
Neognathae	ANCESTRAL SPECIES	4	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153216.a.a.d	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b
Anatidae	ANCESTRAL SPECIES	33	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153216.a.a.d
Pink-footed goose	DUPLICATION
Pink-footed goose	MODERN SPECIES	540																ENSABRG00000014285 #22
Pink-footed goose	MODERN SPECIES	313															NCAM2 (ENSABRG00000002954)	ENSABRG00000002711 #22	BTBD10 (ENSABRG00000002690) #23	PTH (ENSABRG00000002668) #24	FAR1 (ENSABRG00000002606) #25	OVCH2 (ENSABRG00000002528)
Duck	MODERN SPECIES	23	ADM (ENSAPLG00000023045)	AMPD3 (ENSAPLG00000004559)	RNF141 (ENSAPLG00000004710)	LYVE1 (ENSAPLG00000004756)	IRAG1 (ENSAPLG00000004936) #7	CTR9 (ENSAPLG00000005343) #9	EIF4G2 (ENSAPLG00000005642) #10	GALNT18 (ENSAPLG00000014984) #12	USP47 (ENSAPLG00000015288) #14	DKK3 (ENSAPLG00000015829) #15	MICAL2 (ENSAPLG00000015960) #18	ENSAPLG00000016293	PARVA (ENSAPLG00000016301) #19	TEAD1 (ENSAPLG00000016417)	RASSF10 (ENSAPLG00000018425) #21	BMAL1 (ENSAPLG00000003885) #22	BTBD10 (ENSAPLG00000004601) #23	PTH (ENSAPLG00000005099) #24	FAR1 (ENSAPLG00000005107) #25
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00940000170694	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b.c	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948
Chicken	MODERN SPECIES	34	ADM (ENSGALG00010021090)	ENSGALG00010021089	AMPD3 (ENSGALG00010021085)	RNF141 (ENSGALG00010021070)	LYVE1 (ENSGALG00010021064)	IRAG1 (ENSGALG00010021055) #7	CTR9 (ENSGALG00010021050) #9	EIF4G2 (ENSGALG00010021044) #10	GALNT18 (ENSGALG00010022205) #12	USP47 (ENSGALG00010022108) #14	DKK3 (ENSGALG00010022088) #15	MICAL2 (ENSGALG00010022024) #18	PARVA (ENSGALG00010021919) #19	TEAD1 (ENSGALG00010021812)	RASSF10 (ENSGALG00010021758) #21	ARNTL (ENSGALG00010021726) #22	BTBD10 (ENSGALG00010021681) #23	PTH (ENSGALG00010021653) #24	FAR1 (ENSGALG00010021623) #25	OVCH2 (ENSGALG00010021584)	CYB5R2 (ENSGALG00010021545)	PPFIBP2 (ENSGALG00010021474)	OLFML1 (ENSGALG00010021450)	SYT9 (ENSGALG00010021432)	DEPDC7 (ENSGALG00010020493)	TCP11L1 (ENSGALG00010022588)	CSTF3 (ENSGALG00010022545)	HIPK3 (ENSGALG00010019335)	KIAA1549L (ENSGALG00010022569)	C11orf91 (ENSGALG00010022351)	SPON1 (ENSGALG00010022875) #26
Turkey	MODERN SPECIES	25	ENSMGAG00000020427	ENSMGAG00000008348	ENSMGAG00000008398	ENSMGAG00000022955	ENSMGAG00000008501	ENSMGAG00000005223	OLFML1 (ENSMGAG00000005226)	ENSMGAG00000017103	ENSMGAG00000019459	ENSMGAG00000005234	OVCH2 (ENSMGAG00000005290)	ENSMGAG00000018742	ENSMGAG00000019146	FAR1 (ENSMGAG00000020802) #25	ENSMGAG00000005303 #25	BMAL1 (ENSMGAG00000005349) #22	ENSMGAG00000005331 #23	PTH (ENSMGAG00000005325) #24	ENSMGAG00000005493	ENSMGAG00000005550 #19	ENSMGAG00000020129 #18	ENSMGAG00000005635	ENSMGAG00000005642 #18	ENSMGAG00000005725 #14	ENSMGAG00000005796 #12	ENSMGAG00000005834 #10	CTR9 (ENSMGAG00000005904) #9	ENSMGAG00000005964	ENSMGAG00000005939 #7	ENSMGAG00000005977	ENSMGAG00000005992
Japanese quail	MODERN SPECIES	23	AMPD3 (ENSCJPG00005003477)	RNF141 (ENSCJPG00005003474)	LYVE1 (ENSCJPG00005003472)	IRAG1 (ENSCJPG00005003461) #7	CTR9 (ENSCJPG00005002727) #9	EIF4G2 (ENSCJPG00005001835) #10	GALNT18 (ENSCJPG00005001779) #12	USP47 (ENSCJPG00005001740) #14	DKK3 (ENSCJPG00005001725) #15	MICAL2 (ENSCJPG00005001002) #18	ENSCJPG00005000917	ENSCJPG00005000896	PARVA (ENSCJPG00005000880) #19	TEAD1 (ENSCJPG00005018615)	RASSF10 (ENSCJPG00005018613) #21	BMAL1 (ENSCJPG00005018611) #22	BTBD10 (ENSCJPG00005018610) #23	PTH (ENSCJPG00005018609) #24	FAR1 (ENSCJPG00005018608) #25	OVCH2 (ENSCJPG00005018607)	ENSCJPG00005018606	CYB5R2 (ENSCJPG00005018605)	PPFIBP2 (ENSCJPG00005018604)	OLFML1 (ENSCJPG00005018599)	SYT9 (ENSCJPG00005018598)	ENSCJPG00005018595	ENSCJPG00005018594	CDKN1C (ENSCJPG00005018593)	KCNQ1 (ENSCJPG00005018591)	TRPM5 (ENSCJPG00005018590)	TSSC4 (ENSCJPG00005018589)
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00960000189422	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402
Passeriformes	ANCESTRAL SPECIES	25	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763	ENSGT00390000010152	ENSGT00390000000417.a.b	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00960000189422	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Passeriformes_d	ANCESTRAL SPECIES	24	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763	ENSGT00390000010152	ENSGT00390000000417.a.b	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A.j #15	ENSGT00390000000221.A.i #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182956.b.b.a.a.c.a.k.b	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00960000189422	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Flycatcher	MODERN SPECIES	24	SLC6A5 (ENSFALG00000001694)	PRMT3 (ENSFALG00000001682)	DBX1 (ENSFALG00000001676)	NAV2 (ENSFALG00000001640)	E2F8 (ENSFALG00000001625)	CSRP3 (ENSFALG00000001621)	ZDHHC13 (ENSFALG00000001617)	ENSFALG00000029025	ENSFALG00000019928 #15	ENSFALG00000025894	MICAL2 (ENSFALG00000010607) #18	ENSFALG00000010622	PARVA (ENSFALG00000010624) #19	ENSFALG00000025200	TEAD1 (ENSFALG00000010633)	BMAL1 (ENSFALG00000010646) #22	BTBD10 (ENSFALG00000010651) #23	PTH (ENSFALG00000024945) #24	FAR1 (ENSFALG00000010659) #25	OVCH2 (ENSFALG00000010666)	ENSFALG00000026634	CYB5R2 (ENSFALG00000010670)	PPFIBP2 (ENSFALG00000010685)	OLFML1 (ENSFALG00000010695)	SYT9 (ENSFALG00000010701)	ENSFALG00000010710 #26	KIAA1549L (ENSFALG00000010724)	HIPK3 (ENSFALG00000010731)	CSTF3 (ENSFALG00000010764)	TCP11L1 (ENSFALG00000010783)	DEPDC7 (ENSFALG00000010787)
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763	ENSGT00390000010152	ENSGT00390000000417.a.b	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A.j #15	ENSGT00390000000221.A.i #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00960000189422	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Medium ground finch	MODERN SPECIES	105	LTO1 (ENSGFOG00000010010)	CCND1 (ENSGFOG00000010018)	TPCN2 (ENSGFOG00000010031)	NADSYN1 (ENSGFOG00000010073)	DHCR7 (ENSGFOG00000010089)	ENSGFOG00000010095 #12	ENSGFOG00000010104 #12	ENSGFOG00000010109	USP47 (ENSGFOG00000010116) #14	DKK3 (ENSGFOG00000010128) #15	MICAL2 (ENSGFOG00000010142) #18	ENSGFOG00000010175	PARVA (ENSGFOG00000010221) #19	TEAD1 (ENSGFOG00000010592)	ENSGFOG00000010618	BMAL1 (ENSGFOG00000010620) #22	BTBD10 (ENSGFOG00000010627) #23	PTH (ENSGFOG00000010633) #24
Passeroidea	ANCESTRAL SPECIES	42										ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A.i #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00960000189422	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Common canary	MODERN SPECIES	93													MICAL2 (ENSSCAG00000017250) #18	PARVA (ENSSCAG00000017245) #19	TEAD1 (ENSSCAG00000017241)	BMAL1 (ENSSCAG00000017236) #22	BTBD10 (ENSSCAG00000017230) #23	PTH (ENSSCAG00000017227) #24
Zebra finch	MODERN SPECIES	27	PRMT3 (ENSTGUG00000015757)	DBX1 (ENSTGUG00000015791)	ENSTGUG00000023608	NAV2 (ENSTGUG00000015800)	E2F8 (ENSTGUG00000015857)	CSRP3 (ENSTGUG00000015869)	ZDHHC13 (ENSTGUG00000015883)	GALNT18 (ENSTGUG00000016192) #12	USP47 (ENSTGUG00000016131) #14	DKK3 (ENSTGUG00000016109) #15	MICAL2 (ENSTGUG00000016051) #18	PARVA (ENSTGUG00000026634) #19	TEAD1 (ENSTGUG00000021734)	RASSF10 (ENSTGUG00000020390) #21	ENSTGUG00000026557	BMAL1 (ENSTGUG00000015954) #22	BTBD10 (ENSTGUG00000015919) #23	PTH (ENSTGUG00000015915) #24	FAR1 (ENSTGUG00000005222) #25	OVCH2 (ENSTGUG00000005215)	CYB5R2 (ENSTGUG00000005192)	PPFIBP2 (ENSTGUG00000005166)	OLFML1 (ENSTGUG00000005163)	SYT9 (ENSTGUG00000005148)	ENSTGUG00000028253	SPON1 (ENSTGUG00000005111) #26	ENSTGUG00000026725	KIAA1549L (ENSTGUG00000005085)	HIPK3 (ENSTGUG00000005064)	CSTF3 (ENSTGUG00000005010)	TCP11L1 (ENSTGUG00000004982)
Great tit	MODERN SPECIES	25	ANO1 (ENSPMJG00000007664)	FGF3 (ENSPMJG00000007681)	FGF4 (ENSPMJG00000007684)	FGF19 (ENSPMJG00000007686)	LTO1 (ENSPMJG00000007687)	CCND1 (ENSPMJG00000007688)	TPCN2 (ENSPMJG00000007718)	NADSYN1 (ENSPMJG00000007755)	DHCR7 (ENSPMJG00000007768)	USP47 (ENSPMJG00000007803) #14	DKK3 (ENSPMJG00000007821) #15	MICAL2 (ENSPMJG00000007837) #18	PARVA (ENSPMJG00000007907) #19	TEAD1 (ENSPMJG00000007946)	RASSF10 (ENSPMJG00000007953) #21	BMAL1 (ENSPMJG00000008016) #22	BTBD10 (ENSPMJG00000008028) #23	PTH (ENSPMJG00000008035) #24	FAR1 (ENSPMJG00000008037) #25	CYB5R2 (ENSPMJG00000008082)	PPFIBP2 (ENSPMJG00000008084)	OLFML1 (ENSPMJG00000008096)	LUZP2 (ENSPMJG00000008131)	ENSPMJG00000008222	SLC17A6 (ENSPMJG00000008245)	ANO5 (ENSPMJG00000008251)	NELL1 (ENSPMJG00000008380)	SLC6A5 (ENSPMJG00000008383)	PRMT3 (ENSPMJG00000008429)	DBX1 (ENSPMJG00000008433)	NAV2 (ENSPMJG00000008481)
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000163017	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Golden eagle	MODERN SPECIES	7	ADM (ENSACCG00020016016)	AMPD3 (ENSACCG00020016034)	RNF141 (ENSACCG00020016055)	LYVE1 (ENSACCG00020016069)	IRAG1 (ENSACCG00020016130) #7	CTR9 (ENSACCG00020016191) #9	EIF4G2 (ENSACCG00020016240) #10	GALNT18 (ENSACCG00020016298) #12	USP47 (ENSACCG00020016321) #14	DKK3 (ENSACCG00020016341) #15	MICAL2 (ENSACCG00020016355) #18	ENSACCG00020016372	PARVA (ENSACCG00020016382) #19	TEAD1 (ENSACCG00020016394)	RASSF10 (ENSACCG00020016402) #21	BMAL1 (ENSACCG00020016406) #22	BTBD10 (ENSACCG00020016414) #23	PTH (ENSACCG00020016418) #24	FAR1 (ENSACCG00020016423) #25	OVCH2 (ENSACCG00020016430)	ENSACCG00020016438	CYB5R2 (ENSACCG00020016441)	PPFIBP2 (ENSACCG00020016462)	OLFML1 (ENSACCG00020016481)	SYT9 (ENSACCG00020010047)	SPON1 (ENSACCG00020010057) #26	KIAA1549L (ENSACCG00020010154)	HIPK3 (ENSACCG00020010202)	CSTF3 (ENSACCG00020010215)	TCP11L1 (ENSACCG00020010224)	QSER1 (ENSACCG00020010249)
Kakapo	MODERN SPECIES	21	ENSSHBG00005016566	AMPD3 (ENSSHBG00005016632)	RNF141 (ENSSHBG00005016651)	LYVE1 (ENSSHBG00005016657)	IRAG1 (ENSSHBG00005016678) #7	CTR9 (ENSSHBG00005016703) #9	EIF4G2 (ENSSHBG00005016713) #10	GALNT18 (ENSSHBG00005016728) #12	USP47 (ENSSHBG00005016754) #14	DKK3 (ENSSHBG00005016761) #15	MICAL2 (ENSSHBG00005016785) #18	ENSSHBG00005016813	PARVA (ENSSHBG00005016821) #19	TEAD1 (ENSSHBG00005016830)	RASSF10 (ENSSHBG00005016835) #21	BMAL1 (ENSSHBG00005016845) #22	BTBD10 (ENSSHBG00005016861) #23	PTH (ENSSHBG00005016870) #24	ENSSHBG00005016876	FAR1 (ENSSHBG00005016880) #25	OVCH2 (ENSSHBG00005016900)	ENSSHBG00005016922	CYB5R2 (ENSSHBG00005016931)	PPFIBP2 (ENSSHBG00005017045)	CPT1A (ENSSHBG00005018397)	GAL (ENSSHBG00005018399)	PPP6R3 (ENSSHBG00005018403)	LRP5 (ENSSHBG00005018446)	ENSSHBG00005019246	EHF (ENSSHBG00005019250)	APIP (ENSSHBG00005019255)
African ostrich	MODERN SPECIES	213									USP47 (ENSSCUG00000003515) #14	DKK3 (ENSSCUG00000003513) #15	ENSSCUG00000003505	MICAL2 (ENSSCUG00000003478) #18	PARVA (ENSSCUG00000003466) #19	ENSSCUG00000003464	TEAD1 (ENSSCUG00000003455)	BMAL1 (ENSSCUG00000003445) #22	BTBD10 (ENSSCUG00000003444) #23	PTH (ENSSCUG00000003443) #24
Australian saltwater crocodile	MODERN SPECIES	64	AMPD3 (ENSCPRG00005005491)	RNF141 (ENSCPRG00005005516)	LYVE1 (ENSCPRG00005005521)	IRAG1 (ENSCPRG00005005558) #7	CTR9 (ENSCPRG00005005568) #9	EIF4G2 (ENSCPRG00005005649) #10	GALNT18 (ENSCPRG00005006133) #12	USP47 (ENSCPRG00005006168) #14	DKK3 (ENSCPRG00005006225) #15	MICAL2 (ENSCPRG00005006268) #18	ENSCPRG00005006306	PARVA (ENSCPRG00005006323) #19	TEAD1 (ENSCPRG00005006343)	ENSCPRG00005006353	RASSF10 (ENSCPRG00005006357) #21	BMAL1 (ENSCPRG00005006366) #22	BTBD10 (ENSCPRG00005006378) #23	PTH (ENSCPRG00005006384) #24	FAR1 (ENSCPRG00005006386) #25	OVCH2 (ENSCPRG00005006393)	ENSCPRG00005006398	CYB5R2 (ENSCPRG00005006423)	PPFIBP2 (ENSCPRG00005006435)	OLFML1 (ENSCPRG00005006468)	SYT9 (ENSCPRG00005006495)	SPON1 (ENSCPRG00005006526) #26	KIAA1549L (ENSCPRG00005006560)	HIPK3 (ENSCPRG00005006578)	CSTF3 (ENSCPRG00005006608)	ENSCPRG00005006616	TCP11L1 (ENSCPRG00005006620)
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a.f	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Emydidae	ANCESTRAL SPECIES	2															ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a.f	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
painted turtle	MODERN SPECIES	2372								USP47 (ENSCPBG00000016480) #14	DKK3 (ENSCPBG00000016472) #15	MICAL2 (ENSCPBG00000016465) #18	ENSCPBG00000016452	PARVA (ENSCPBG00000016443) #19	TEAD1 (ENSCPBG00000016431)	ENSCPBG00000016426	RASSF10 (ENSCPBG00000016422) #21	BMAL1 (ENSCPBG00000016418) #22	BTBD10 (ENSCPBG00000016415) #23	PTH (ENSCPBG00000016412) #24	FAR1 (ENSCPBG00000016408) #25	ENSCPBG00000016406	OVCH2 (ENSCPBG00000016402)	CYB5R2 (ENSCPBG00000015514)	PPFIBP2 (ENSCPBG00000015448)	OLFML1 (ENSCPBG00000015441)	SYT9 (ENSCPBG00000015438)	SPON1 (ENSCPBG00000015434) #26
Three-toed box turtle	MODERN SPECIES	40	RNF141 (ENSTMTG00000003859)	LYVE1 (ENSTMTG00000003873)	IRAG1 (ENSTMTG00000003896) #7	CTR9 (ENSTMTG00000003960) #9	EIF4G2 (ENSTMTG00000004121) #10	GALNT18 (ENSTMTG00000004782) #12	USP47 (ENSTMTG00000004844) #14	DKK3 (ENSTMTG00000004972) #15	MICAL2 (ENSTMTG00000005079) #18	ENSTMTG00000005299	PARVA (ENSTMTG00000005390) #19	TEAD1 (ENSTMTG00000005402)	ENSTMTG00000005422	RASSF10 (ENSTMTG00000005444) #21	ENSTMTG00000005484	BMAL1 (ENSTMTG00000005488) #22	BTBD10 (ENSTMTG00000005526) #23	PTH (ENSTMTG00000005550) #24	FAR1 (ENSTMTG00000005563) #25	OVCH2 (ENSTMTG00000005603)	CYB5R2 (ENSTMTG00000005668)	PPFIBP2 (ENSTMTG00000005705)	OLFML1 (ENSTMTG00000005872)	SYT9 (ENSTMTG00000005920)	SPON1 (ENSTMTG00000005996) #26	C11orf91 (ENSTMTG00000006306)	KIAA1549L (ENSTMTG00000006330)	HIPK3 (ENSTMTG00000006480)	CSTF3 (ENSTMTG00000006542)	TCP11L1 (ENSTMTG00000006922)	DEPDC7 (ENSTMTG00000007040)
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a.f	ENSGT01050000244951.a.b.a.a.e	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402
Goode s thornscrub tortoise	MODERN SPECIES	18	AMPD3 (ENSGEVG00005003601)	RNF141 (ENSGEVG00005003585)	LYVE1 (ENSGEVG00005003577)	IRAG1 (ENSGEVG00005003562) #7	CTR9 (ENSGEVG00005003533) #9	EIF4G2 (ENSGEVG00005003450) #10	GALNT18 (ENSGEVG00005003415) #12	USP47 (ENSGEVG00005003369) #14	DKK3 (ENSGEVG00005003343) #15	MICAL2 (ENSGEVG00005003321) #18	ENSGEVG00005003266	PARVA (ENSGEVG00005003224) #19	TEAD1 (ENSGEVG00005003204)	ENSGEVG00005003195	RASSF10 (ENSGEVG00005003174) #21	BMAL1 (ENSGEVG00005003146) #22	BTBD10 (ENSGEVG00005003133) #23	PTH (ENSGEVG00005003123) #24	ENSGEVG00005003081 #25	ENSGEVG00005003055 #25	ENSGEVG00005003043 #25	OVCH2 (ENSGEVG00005003021)	CYB5R2 (ENSGEVG00005002996)	PPFIBP2 (ENSGEVG00005002983)	ENSGEVG00005002954	OLFML1 (ENSGEVG00005002913)	ENSGEVG00005002836	SYT9 (ENSGEVG00005002769)	SPON1 (ENSGEVG00005002736) #26	C11orf91 (ENSGEVG00005002711)	KIAA1549L (ENSGEVG00005002647)
Abingdon island giant tortoise	MODERN SPECIES	1641						USP47 (ENSCABG00000016031) #14	DKK3 (ENSCABG00000016041) #15	ENSCABG00000016054	ENSCABG00000016055	ENSCABG00000016056	MICAL2 (ENSCABG00000016060) #18	PARVA (ENSCABG00000016065) #19	TEAD1 (ENSCABG00000016073)	ENSCABG00000016079	RASSF10 (ENSCABG00000016080) #21	BMAL1 (ENSCABG00000016085) #22	BTBD10 (ENSCABG00000016087) #23	PTH (ENSCABG00000016090) #24
Chinese turtle	MODERN SPECIES	345																BMAL1 (ENSPSIG00000013131) #22	BTBD10 (ENSPSIG00000004346) #23	ENSPSIG00000004600 #24	ENSPSIG00000004720 #24	FAR1 (ENSPSIG00000004809) #25	ENSPSIG00000005261	ENSPSIG00000005296
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Episquamata	ANCESTRAL SPECIES		ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000154380.b	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00940000163529	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Common wall lizard	MODERN SPECIES		LYVE1 (ENSPMRG00000002077)	IRAG1 (ENSPMRG00000002066) #7	ENSPMRG00000002059	CTR9 (ENSPMRG00000002037) #9	ENSPMRG00000002028	EIF4G2 (ENSPMRG00000001920) #10	ENSPMRG00000001905	GALNT18 (ENSPMRG00000001895) #12	USP47 (ENSPMRG00000001801) #14	DKK3 (ENSPMRG00000001772) #15	MICAL2 (ENSPMRG00000001691) #18	ENSPMRG00000001659	PARVA (ENSPMRG00000001638) #19	TEAD1 (ENSPMRG00000001610)	RASSF10 (ENSPMRG00000001601) #21	BMAL1 (ENSPMRG00000001586) #22	BTBD10 (ENSPMRG00000001570) #23	PTH (ENSPMRG00000001559) #24	FAR1 (ENSPMRG00000001540) #25	OVCH2 (ENSPMRG00000001511)	CYB5R2 (ENSPMRG00000001499)	PPFIBP2 (ENSPMRG00000001265)	OLFML1 (ENSPMRG00000001219)	ENSPMRG00000001214	ENSPMRG00000001208	SYT9 (ENSPMRG00000001186)	ENSPMRG00000001170	SPON1 (ENSPMRG00000001084) #26	ENSPMRG00000001052	C11orf91 (ENSPMRG00000001042)	KIAA1549L (ENSPMRG00000000918)
Argentine black and white tegu	MODERN SPECIES	3	AMPD3 (ENSSMRG00000015048)	RNF141 (ENSSMRG00000015049)	LYVE1 (ENSSMRG00000015050)	IRAG1 (ENSSMRG00000015051) #7	CTR9 (ENSSMRG00000015054) #9	EIF4G2 (ENSSMRG00000015061) #10	ENSSMRG00000015954	GALNT18 (ENSSMRG00000015955) #12	USP47 (ENSSMRG00000016046) #14	DKK3 (ENSSMRG00000016049) #15	MICAL2 (ENSSMRG00000016051) #18	ENSSMRG00000016052	PARVA (ENSSMRG00000016053) #19	TEAD1 (ENSSMRG00000000013)	RASSF10 (ENSSMRG00000000171) #21	BMAL1 (ENSSMRG00000000457) #22	BTBD10 (ENSSMRG00000000491) #23	PTH (ENSSMRG00000000515) #24	FAR1 (ENSSMRG00000000524) #25	OVCH2 (ENSSMRG00000000561)	CYB5R2 (ENSSMRG00000000628)	PPFIBP2 (ENSSMRG00000000648)	OLFML1 (ENSSMRG00000000814)	ENSSMRG00000000823	SYT9 (ENSSMRG00000000834)	SPON1 (ENSSMRG00000000930) #26	C11orf91 (ENSSMRG00000000979)	KIAA1549L (ENSSMRG00000001010)	HIPK3 (ENSSMRG00000001108)	CSTF3 (ENSSMRG00000001133)	TCP11L1 (ENSSMRG00000001156)
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00940000155385	ENSGT00940000170694	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000155385	ENSGT00940000170694	ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b
Elapidae_a	ANCESTRAL SPECIES	4			ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402.c	ENSGT00950000182976.a.b
Acanthophiinae	ANCESTRAL SPECIES	6			ENSGT00950000183011.c.a.b	ENSGT00390000003145	ENSGT00530000063822.a.b	ENSGT00530000063722.b #7	ENSGT00390000005097 #9	ENSGT00940000154675 #10	ENSGT00940000155456 #12	ENSGT00940000157223 #14	ENSGT00390000000221.A #15	ENSGT00940000158780 #18	ENSGT00950000183194.a.b #19	ENSGT00950000182956.b.b.a.a.c.a.l	ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000018603 #24	ENSGT00390000006367.d #25	ENSGT00940000157791	ENSGT00940000153962.a	ENSGT01050000244951.a.b.a.a	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b #26	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402.c	ENSGT00950000182976.a.b
Eastern brown snake	MODERN SPECIES	1		AMPD3 (ENSPTXG00000000014)	RNF141 (ENSPTXG00000000032)	LYVE1 (ENSPTXG00000000046)	IRAG1 (ENSPTXG00000000062) #7	CTR9 (ENSPTXG00000000129) #9	EIF4G2 (ENSPTXG00000000381) #10	GALNT18 (ENSPTXG00000002762) #12	USP47 (ENSPTXG00000002764) #14	DKK3 (ENSPTXG00000002767) #15	MICAL2 (ENSPTXG00000002773) #18	PARVA (ENSPTXG00000002819) #19	TEAD1 (ENSPTXG00000002820)	ENSPTXG00000002822	RASSF10 (ENSPTXG00000002824) #21	BMAL1 (ENSPTXG00000002825) #22	BTBD10 (ENSPTXG00000002828) #23	PTH (ENSPTXG00000002829) #24	FAR1 (ENSPTXG00000002831) #25	ENSPTXG00000002833	CYB5R2 (ENSPTXG00000002835)	PPFIBP2 (ENSPTXG00000002838)	OLFML1 (ENSPTXG00000002846)	SYT9 (ENSPTXG00000002849)	SPON1 (ENSPTXG00000002862) #26	C11orf91 (ENSPTXG00000002888)	KIAA1549L (ENSPTXG00000002896)	HIPK3 (ENSPTXG00000002902)	CSTF3 (ENSPTXG00000002909)	TCP11L1 (ENSPTXG00000003098)	DEPDC7 (ENSPTXG00000003100)
Mainland tiger snake	MODERN SPECIES	9	ENSNSUG00000014058	AMPD3 (ENSNSUG00000014057)	RNF141 (ENSNSUG00000014056)	LYVE1 (ENSNSUG00000014055)	IRAG1 (ENSNSUG00000014053) #7	CTR9 (ENSNSUG00000014052) #9	EIF4G2 (ENSNSUG00000013593) #10	GALNT18 (ENSNSUG00000013592) #12	USP47 (ENSNSUG00000013512) #14	DKK3 (ENSNSUG00000013511) #15	MICAL2 (ENSNSUG00000013510) #18	PARVA (ENSNSUG00000013387) #19	TEAD1 (ENSNSUG00000013231)	ENSNSUG00000013230	RASSF10 (ENSNSUG00000013229) #21	BMAL1 (ENSNSUG00000013227) #22	BTBD10 (ENSNSUG00000013226) #23	PTH (ENSNSUG00000013225) #24	FAR1 (ENSNSUG00000013224) #25	OVCH2 (ENSNSUG00000013223)	CYB5R2 (ENSNSUG00000013222)	PPFIBP2 (ENSNSUG00000012598)	OLFML1 (ENSNSUG00000012589)	SYT9 (ENSNSUG00000012588)	SPON1 (ENSNSUG00000012587) #26	C11orf91 (ENSNSUG00000012586)	KIAA1549L (ENSNSUG00000012584)	HIPK3 (ENSNSUG00000012471)	CSTF3 (ENSNSUG00000012169)	TCP11L1 (ENSNSUG00000012167)	DEPDC7 (ENSNSUG00000012166)
Blue-lipped sea krait	MODERN SPECIES	7179																BMAL1 (ENSLLTG00000009572) #22
Indian cobra	MODERN SPECIES		ENSNNAG00000011622	AMPD3 (ENSNNAG00000011642)	RNF141 (ENSNNAG00000011717)	LYVE1 (ENSNNAG00000011730)	IRAG1 (ENSNNAG00000011742) #7	CTR9 (ENSNNAG00000011838) #9	EIF4G2 (ENSNNAG00000011969) #10	GALNT18 (ENSNNAG00000013469) #12	USP47 (ENSNNAG00000013503) #14	DKK3 (ENSNNAG00000013687) #15	MICAL2 (ENSNNAG00000013727) #18	PARVA (ENSNNAG00000013833) #19	TEAD1 (ENSNNAG00000013859)	ENSNNAG00000013893	RASSF10 (ENSNNAG00000013897) #21	BMAL1 (ENSNNAG00000013912) #22	BTBD10 (ENSNNAG00000013963) #23	PTH (ENSNNAG00000013994) #24	FAR1 (ENSNNAG00000014004) #25	ENSNNAG00000014045 #25	OVCH2 (ENSNNAG00000014067)	CYB5R2 (ENSNNAG00000014153)	PPFIBP2 (ENSNNAG00000014206)	OLFML1 (ENSNNAG00000014376)	SYT9 (ENSNNAG00000014395)	SPON1 (ENSNNAG00000014425) #26	ENSNNAG00000014446	C11orf91 (ENSNNAG00000014453)	KIAA1549L (ENSNNAG00000014463)	HIPK3 (ENSNNAG00000014531)	CSTF3 (ENSNNAG00000014604)
Lizard	MODERN SPECIES	851		GALNT18 (ENSACAG00000010002) #12	ENSACAG00000039918	USP47 (ENSACAG00000004976) #14	DKK3 (ENSACAG00000004940) #15	MICAL2 (ENSACAG00000004829) #18	ENSACAG00000036411	ENSACAG00000036262	ENSACAG00000036603	PARVA (ENSACAG00000004824) #19	ENSACAG00000042294	TEAD1 (ENSACAG00000004642)	ENSACAG00000036545	ENSACAG00000027156	RASSF10 (ENSACAG00000004627) #21	BMAL1 (ENSACAG00000004497) #22	BTBD10 (ENSACAG00000004419) #23	PTH (ENSACAG00000024206) #24	ENSACAG00000043091 #25	ENSACAG00000038993 #25	OVCH2 (ENSACAG00000004288)	CYB5R2 (ENSACAG00000004175)	PPFIBP2 (ENSACAG00000004043)	ENSACAG00000045529	OLFML1 (ENSACAG00000040357)	SYT9 (ENSACAG00000005895)	ENSACAG00000038666
tuatara	MODERN SPECIES	1456										GALNT18 (ENSSPUG00000002893) #12	USP47 (ENSSPUG00000002758) #14	DKK3 (ENSSPUG00000002719) #15	MICAL2 (ENSSPUG00000002665) #18	PARVA (ENSSPUG00000002506) #19	TEAD1 (ENSSPUG00000002455)	BMAL1 (ENSSPUG00000002411) #22	BTBD10 (ENSSPUG00000002392) #23	PTH (ENSSPUG00000002387) #24	FAR1 (ENSSPUG00000002374) #25	OVCH2 (ENSSPUG00000002358)	CYB5R2 (ENSSPUG00000002216)	PPFIBP2 (ENSSPUG00000002127)	OLFML1 (ENSSPUG00000002099)	SYT9 (ENSSPUG00000002078)	ENSSPUG00000001690 #26	ENSSPUG00000001633 #26
Anura	ANCESTRAL SPECIES	184															ENSGT00950000182839.A.d #21	ENSGT00940000157523 #22	ENSGT00390000007975.a #23	ENSGT00390000000417.a.b	ENSGT00530000063074.b.a	ENSGT00940000159533	ENSGT00940000158651	ENSGT00940000155663	ENSGT00950000183093.B	ENSGT00390000008184	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A	ENSGT00940000155692	ENSGT01030000234621.E	ENSGT00940000155891	ENSGT00940000155755
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000022835	ENSLLEG00000022791	ENSLLEG00000022773	GALNT18 (ENSLLEG00000021552) #12	USP47 (ENSLLEG00000020046) #14	DKK3 (ENSLLEG00000019853) #15	MICAL2 (ENSLLEG00000019444) #18	PARVA (ENSLLEG00000019166) #19	TEAD1 (ENSLLEG00000018809)	ENSLLEG00000018747	ENSLLEG00000018715	RASSF10 (ENSLLEG00000018667) #21	ENSLLEG00000018575	ENSLLEG00000018535	ENSLLEG00000018472	BMAL1 (ENSLLEG00000017557) #22	BTBD10 (ENSLLEG00000017147) #23	ENSLLEG00000017105	DHCR7 (ENSLLEG00000016950)	ZDHHC13 (ENSLLEG00000016482)	ENSLLEG00000016447	CSRP3 (ENSLLEG00000016379)	E2F8 (ENSLLEG00000016232)	ENSLLEG00000016204	ENSLLEG00000016182	NAV2 (ENSLLEG00000015784)	DBX1 (ENSLLEG00000015679)	ENSLLEG00000015610	PRMT3 (ENSLLEG00000015222)	SLC6A5 (ENSLLEG00000014934)	NELL1 (ENSLLEG00000013886)
Frog	MODERN SPECIES	4	lyve1 (ENSXETG00000041272)	rnf141 (ENSXETG00000008400)	irag1 (ENSXETG00000031675) #7	ctr9 (ENSXETG00000013673) #9	eif4g2 (ENSXETG00000013674) #10	galnt18 (ENSXETG00000044151) #12	ENSXETG00000045425	usp47 (ENSXETG00000013696) #14	dkk3 (ENSXETG00000047731) #15	mical2 (ENSXETG00000013702) #18	ENSXETG00000042966	parva (ENSXETG00000044397) #19	tead1 (ENSXETG00000047398)	mgat4g (ENSXETG00000042665)	RASSF10 (ENSXETG00000019780) #21	arntl (ENSXETG00000024204) #22	btbd10 (ENSXETG00000024203) #23	ENSXETG00000036042	ipo7 (ENSXETG00000024201)	tmem41b (ENSXETG00000024814)	znf143 (ENSXETG00000024199)	wee1 (ENSXETG00000046207)	swap70 (ENSXETG00000024196)	sbf2 (ENSXETG00000009226)	adm (ENSXETG00000040245)	lrrc4c (ENSXETG00000003847)	ENSXETG00000042134	ENSXETG00000048704	ENSXETG00000044966	sycp3 (ENSXETG00000023270)	api5 (ENSXETG00000022227)
Coelacanth	MODERN SPECIES	1249																BMAL1 (ENSLACG00000004629) #22	BTBD10 (ENSLACG00000005584) #23	ENSLACG00000006640	FAR1 (ENSLACG00000008029) #25	ENSLACG00000008681	ENSLACG00000009167	PPFIBP2 (ENSLACG00000009625)	OLFML1 (ENSLACG00000011709)	SYT9 (ENSLACG00000012308)