Vertebrata	ANCESTRAL SPECIES	1160																ENSGT00950000182885.A.a #22	ENSGT00940000156912 #24
Gnathostomata	ANCESTRAL SPECIES	125													ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000156912 #24	ENSGT00390000003287	ENSGT00940000158805.a	ENSGT00940000158300	ENSGT00390000011846	ENSGT00940000160333	ENSGT00440000039564.a.b	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00940000156870	ENSGT00940000155653.b	ENSGT00390000001545	ENSGT00950000182839.B.b	ENSGT00950000183205.b.a.a
Euteleostomi	ANCESTRAL SPECIES	92												ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00390000003287	ENSGT00940000158805.a	ENSGT00940000158300	ENSGT00390000011846	ENSGT00940000160333	ENSGT00440000039564.a.b	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00940000174432	ENSGT00940000161238	ENSGT00940000155653.b	ENSGT00390000001545	ENSGT00940000169472
Sarcopterygii	ANCESTRAL SPECIES	21												ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.a.b ##25	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Tetrapoda	ANCESTRAL SPECIES	9	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT01030000235062
Amniota	ANCESTRAL SPECIES	20	ENSGT00940000159535	ENSGT00950000185387	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00940000175801	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Mammalia	ANCESTRAL SPECIES	9				ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00940000175801	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT01030000235062
Theria	ANCESTRAL SPECIES	8	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a	ENSGT00940000175801	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT01050000245084	ENSGT00940000164956	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a	ENSGT00940000175801	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a	ENSGT00940000175801	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.b	ENSGT00940000175801	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.b	ENSGT00940000175801	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01030000234639.A.b.a.b.a.b.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.u	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Pecora	ANCESTRAL SPECIES	7	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00960000189557	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Percora_a	ANCESTRAL SPECIES	6	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00960000189557	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Bovidae	ANCESTRAL SPECIES	6	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00960000189557	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000159111	ENSGT00530000063405.b	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Rambouillet Sheep	MODERN SPECIES	6	TECTA (ENSOARG00020018982) #7	SC5D (ENSOARG00020019328) #8	SORL1 (ENSOARG00020019410) #9	ENSOARG00020019983 #10	ENSOARG00020020082 #11	UBASH3B (ENSOARG00020020117) #12	CRTAM (ENSOARG00020020211) #13	JHY (ENSOARG00020020294) #14	BSX (ENSOARG00020020411) #15	HSPA8 (ENSOARG00020020443) #16	CLMP (ENSOARG00020020617) #17	GRAMD1B (ENSOARG00020020792) #18	SCN3B (ENSOARG00020022761) #19	ZNF202 (ENSOARG00020022786) #20	SAAL1 (ENSOARG00020022824) #21	TPH1 (ENSOARG00020022961) #22	SERGEF (ENSOARG00020023024) #23	KCNC1 (ENSOARG00020023195) #24	MYOD1 (ENSOARG00020003202) #25	OTOG (ENSOARG00020003321) #26	USH1C (ENSOARG00020004095) #27	ABCC8 (ENSOARG00020004289) #28	KCNJ11 (ENSOARG00020005759) #29	ENSOARG00020005772 #30	NUCB2 (ENSOARG00020005797) #31	ENSOARG00020005854 #32	PIK3C2A (ENSOARG00020005921) #33	ENSOARG00020006224 #34	PLEKHA7 (ENSOARG00020006298) #35	C11orf58 (ENSOARG00020007043) #36	HSP10 (ENSOARG00020007118) #37
Goat	MODERN SPECIES	6	TBCEL (ENSCHIG00000018085)	TECTA (ENSCHIG00000014187) #7	SC5D (ENSCHIG00000008144) #8	SORL1 (ENSCHIG00000020653) #9	UBASH3B (ENSCHIG00000027002) #12	CRTAM (ENSCHIG00000016236) #13	ENSCHIG00000017759	JHY (ENSCHIG00000006072) #14	BSX (ENSCHIG00000002885) #15	HSPA8 (ENSCHIG00000017000) ##16	CLMP (ENSCHIG00000010482) #17	GRAMD1B (ENSCHIG00000012464) #18	SCN3B (ENSCHIG00000006052) #19	ZNF202 (ENSCHIG00000026799) #20	SAAL1 (ENSCHIG00000014782) #21	TPH1 (ENSCHIG00000022168) #22	SERGEF (ENSCHIG00000016321) #23	KCNC1 (ENSCHIG00000010620) #24	MYOD1 (ENSCHIG00000009793) #25	OTOG (ENSCHIG00000002155) #26	USH1C (ENSCHIG00000006681) #27	ABCC8 (ENSCHIG00000014117) #28	KCNJ11 (ENSCHIG00000009617) #29	NUCB2 (ENSCHIG00000025278) #31	ENSCHIG00000010858	PIK3C2A (ENSCHIG00000015119) #33	ENSCHIG00000023276	ENSCHIG00000003111	PLEKHA7 (ENSCHIG00000013421) #35	C11orf58 (ENSCHIG00000019685) #36	SOX6 (ENSCHIG00000021925)
Bovinae	ANCESTRAL SPECIES	21	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00960000189557	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00390000014320.l	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Bos	ANCESTRAL SPECIES	20	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00960000189557	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00390000014320.l	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Bos_a	ANCESTRAL SPECIES	15	ENSGT00530000063405.b	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00390000014320.l	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Wild yak	MODERN SPECIES	842										GRAMD1B (ENSBMUG00000017822) #18	SCN3B (ENSBMUG00000017879) #19	ZNF202 (ENSBMUG00000017926) #20	ENSBMUG00000017949	ENSBMUG00000017967 ##21	SAAL1 (ENSBMUG00000017997) #21	TPH1 (ENSBMUG00000018029) #22	SERGEF (ENSBMUG00000018049) #23	KCNC1 (ENSBMUG00000018067) #24	MYOD1 (ENSBMUG00000018081) #25	OTOG (ENSBMUG00000018131) #26	USH1C (ENSBMUG00000018213) #27	ABCC8 (ENSBMUG00000018420) #28	KCNJ11 (ENSBMUG00000018613) #29	ENSBMUG00000018622 #30	NUCB2 (ENSBMUG00000018650) #31	PIK3C2A (ENSBMUG00000018688) #33	ENSBMUG00000018732	ENSBMUG00000018750	PLEKHA7 (ENSBMUG00000018920) #35	C11orf58 (ENSBMUG00000018970) #36	SOX6 (ENSBMUG00000019308)
Domestic yak	MODERN SPECIES	4	SORL1 (ENSBGRG00000011099) #9	ENSBGRG00000011053	UBASH3B (ENSBGRG00000010659) #12	CRTAM (ENSBGRG00000015363) #13	JHY (ENSBGRG00000015236) #14	ENSBGRG00000015174	BSX (ENSBGRG00000015127) #15	ENSBGRG00000015071	HSPA8 (ENSBGRG00000014719) #16	CLMP (ENSBGRG00000014616) #17	GRAMD1B (ENSBGRG00000013095) #18	SCN3B (ENSBGRG00000012965) #19	ZNF202 (ENSBGRG00000012911) #20	ENSBGRG00000012876 ##21	SAAL1 (ENSBGRG00000012533) #21	TPH1 (ENSBGRG00000012473) #22	SERGEF (ENSBGRG00000012334) #23	KCNC1 (ENSBGRG00000012223) #24	OTOG (ENSBGRG00000011342) #26	USH1C (ENSBGRG00000010311) #27	ABCC8 (ENSBGRG00000009791) #28	KCNJ11 (ENSBGRG00000009694) #29	ENSBGRG00000009664 #30	NUCB2 (ENSBGRG00000009502) #31	ENSBGRG00000009346	PIK3C2A (ENSBGRG00000009254) #33	ENSBGRG00000009189	PLEKHA7 (ENSBGRG00000009104) #35	C11orf58 (ENSBGRG00000009025) #36	SOX6 (ENSBGRG00000008760)	ENSBGRG00000008740
Bos_b	ANCESTRAL SPECIES	19	ENSGT00950000183155.a.a.a.b #7	ENSGT00550000075101 #8	ENSGT01030000234563.a.b #9	ENSGT00960000189557	ENSGT00940000156097 #12	ENSGT00940000159804 #13	ENSGT00390000002823 #14	ENSGT00940000161473 #15	ENSGT00950000183206.b.c.b ##16	ENSGT00940000161031 #17	ENSGT00940000156649 #18	ENSGT00390000018560.b #19	ENSGT00940000161189 #20	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00390000014320.l	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.s.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Cow	MODERN SPECIES	6	SC5D (ENSBTAG00000019246) #8	ENSBTAG00000051189	SORL1 (ENSBTAG00000014611) #9	ENSBTAG00000053620	UBASH3B (ENSBTAG00000000842) #12	CRTAM (ENSBTAG00000005193) #13	JHY (ENSBTAG00000013989) #14	BSX (ENSBTAG00000013994) #15	HSPA8 (ENSBTAG00000013162) ##16	CLMP (ENSBTAG00000020046) #17	GRAMD1B (ENSBTAG00000001410) #18	SCN3B (ENSBTAG00000016768) #19	ZNF202 (ENSBTAG00000016684) #20	ENSBTAG00000050079 ##21	SAAL1 (ENSBTAG00000008804) #21	TPH1 (ENSBTAG00000005343) #22	SERGEF (ENSBTAG00000005340) #23	KCNC1 (ENSBTAG00000005424) #24	MYOD1 (ENSBTAG00000002216) #25	OTOG (ENSBTAG00000000987) #26	USH1C (ENSBTAG00000000986) #27	ABCC8 (ENSBTAG00000000983) #28	KCNJ11 (ENSBTAG00000016170) #29	NCR3LG1 (ENSBTAG00000050060) #30	NUCB2 (ENSBTAG00000017468) #31	PIK3C2A (ENSBTAG00000004901) #33	ENSBTAG00000032859	RPS13 (ENSBTAG00000040308)	PLEKHA7 (ENSBTAG00000006974) #35	C15H11orf58 (ENSBTAG00000006755) #36	SOX6 (ENSBTAG00000044185)
Hybrid Bos Indicus	MODERN SPECIES	6	ENSBIXG00005005191	SORL1 (ENSBIXG00005005228) #9	UBASH3B (ENSBIXG00005011282) #12	CRTAM (ENSBIXG00005011302) #13	JHY (ENSBIXG00005011352) #14	BSX (ENSBIXG00005011376) #15	ENSBIXG00005011538 ##16	CLMP (ENSBIXG00005011593) #17	GRAMD1B (ENSBIXG00005011762) #18	SCN3B (ENSBIXG00005011870) #19	ZNF202 (ENSBIXG00005001192) #20	ENSBIXG00005001194	ENSBIXG00005011988 ##21	ENSBIXG00005011994	SAAL1 (ENSBIXG00005001235) #21	TPH1 (ENSBIXG00005001239) #22	SERGEF (ENSBIXG00005012129) #23	KCNC1 (ENSBIXG00005012180) #24	MYOD1 (ENSBIXG00005001263) #25	OTOG (ENSBIXG00005012215) #26	USH1C (ENSBIXG00005012316) #27	ABCC8 (ENSBIXG00005000335) #28	KCNJ11 (ENSBIXG00005012565) #29	ENSBIXG00005012573 #30	NUCB2 (ENSBIXG00005012643) #31	ENSBIXG00005012679	PIK3C2A (ENSBIXG00005000289) #33	ENSBIXG00005005701	ENSBIXG00005012803	PLEKHA7 (ENSBIXG00005012963) #35	C11orf58 (ENSBIXG00005013055) #36
American bison	MODERN SPECIES	3365	TECTA (ENSBBBG00000018626) #7	SC5D (ENSBBBG00000018532) #8	ENSBBBG00000018510	SORL1 (ENSBBBG00000018493) #9	ENSBBBG00000018379	UBASH3B (ENSBBBG00000018323) #12	CRTAM (ENSBBBG00000018292) #13	JHY (ENSBBBG00000018276) #14	BSX (ENSBBBG00000018188) #15	ENSBBBG00000018029 ##16	CLMP (ENSBBBG00000016837) #17	GRAMD1B (ENSBBBG00000000719) #18	SCN3B (ENSBBBG00000016043) #19	ZNF202 (ENSBBBG00000016005) #20	SAAL1 (ENSBBBG00000015979) #21	TPH1 (ENSBBBG00000007903) #22	SERGEF (ENSBBBG00000015878) #23	KCNC1 (ENSBBBG00000015796) #24	MYOD1 (ENSBBBG00000015770) #25	OTOG (ENSBBBG00000000781) #26	USH1C (ENSBBBG00000015646) #27	ABCC8 (ENSBBBG00000015495) #28	KCNJ11 (ENSBBBG00000015136) #29	NUCB2 (ENSBBBG00000015107) #31	ENSBBBG00000014999	PIK3C2A (ENSBBBG00000003706) #33	ENSBBBG00000003602	PLEKHA7 (ENSBBBG00000014936) #35	C11orf58 (ENSBBBG00000000901) #36	SOX6 (ENSBBBG00000000977)	INSC (ENSBBBG00000001200)
Siberian musk deer	MODERN SPECIES	1170	SC5D (ENSMMSG00000020336) #8	SORL1 (ENSMMSG00000019969) #9	ENSMMSG00000019895	UBASH3B (ENSMMSG00000019850) #12	ENSMMSG00000019827	CRTAM (ENSMMSG00000019788) #13	JHY (ENSMMSG00000019753) #14	BSX (ENSMMSG00000019731) #15	ENSMMSG00000019680 ##16	CLMP (ENSMMSG00000019631) #17	GRAMD1B (ENSMMSG00000016337) #18	SCN3B (ENSMMSG00000016197) #19	ZNF202 (ENSMMSG00000016172) #20	ENSMMSG00000016147 ##21	SAAL1 (ENSMMSG00000016101) #21	TPH1 (ENSMMSG00000016054) #22	SERGEF (ENSMMSG00000015986) #23	KCNC1 (ENSMMSG00000015913) #24	MYOD1 (ENSMMSG00000015886) #25	ENSMMSG00000015872	ENSMMSG00000015857	OTOG (ENSMMSG00000015691) #26	USH1C (ENSMMSG00000015357) #27	ABCC8 (ENSMMSG00000014012) #28	KCNJ11 (ENSMMSG00000013924) #29	ENSMMSG00000013898 #30	NUCB2 (ENSMMSG00000013778) #31	PIK3C2A (ENSMMSG00000013636) #33	ENSMMSG00000013583	PLEKHA7 (ENSMMSG00000013421) #35	C11orf58 (ENSMMSG00000013390) #36
Yarkand deer	MODERN SPECIES		TECTA (ENSCHYG00000009743) #7	SC5D (ENSCHYG00000010091) #8	SORL1 (ENSCHYG00000010203) #9	UBASH3B (ENSCHYG00000010800) #12	CRTAM (ENSCHYG00000010922) #13	JHY (ENSCHYG00000011012) #14	BSX (ENSCHYG00000011105) #15	ENSCHYG00000011140	HSPA8 (ENSCHYG00000011182) #16	CLMP (ENSCHYG00000011450) #17	GRAMD1B (ENSCHYG00000011570) #18	SCN3B (ENSCHYG00000012415) #19	ZNF202 (ENSCHYG00000012502) #20	ENSCHYG00000012579 ##21	SAAL1 (ENSCHYG00000012719) #21	TPH1 (ENSCHYG00000012793) #22	SERGEF (ENSCHYG00000012902) #23	KCNC1 (ENSCHYG00000013038) #24	MYOD1 (ENSCHYG00000013095) #25	OTOG (ENSCHYG00000013158) #26	USH1C (ENSCHYG00000013383) #27	ABCC8 (ENSCHYG00000013838) #28	KCNJ11 (ENSCHYG00000014523) #29	ENSCHYG00000014538 #30	NUCB2 (ENSCHYG00000014573) #31	PIK3C2A (ENSCHYG00000014721) #33	ENSCHYG00000015259	PLEKHA7 (ENSCHYG00000015374) #35	C11orf58 (ENSCHYG00000016095) #36	SOX6 (ENSCHYG00000016309)	ENSCHYG00000017074
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164956	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a.m.a	ENSGT00940000161479	ENSGT00940000153201.j.u	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157251.hb	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.r	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01030000234639.A.b.a.b.a.b.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a.m.a	ENSGT00940000161479	ENSGT00940000153201.j.u	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157251.hb	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.r	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00530000063074.b.a	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a.m.a	ENSGT00940000161479	ENSGT00940000153201.j.u	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157251.hb	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.r	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00390000012981.rb.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a.m.a	ENSGT00940000161479	ENSGT00940000153201.j.u	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157251.hb	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.r	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00530000063074.b.a	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00390000012981.rb.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a.m.a	ENSGT00940000161479	ENSGT00940000153201.j.u	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157251.hb	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.r	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Narwhal	MODERN SPECIES	314	SPTY2D1 (ENSMMNG00015021771)	MISFA (ENSMMNG00015021767)	ENSMMNG00015021762	UEVLD (ENSMMNG00015021744)	TSG101 (ENSMMNG00015021720)	ENSMMNG00015021710	ENSMMNG00015021702	ENSMMNG00015021700	ENSMMNG00015021692	GTF2H1 (ENSMMNG00015021680)	HPS5 (ENSMMNG00015021667)	ENSMMNG00015021655	ENSMMNG00015021651 ##21	ENSMMNG00015021647 ##21	SAAL1 (ENSMMNG00015021635) #21	TPH1 (ENSMMNG00015021621) #22	SERGEF (ENSMMNG00015021595) #23	KCNC1 (ENSMMNG00015021571) #24	MYOD1 (ENSMMNG00015021563) #25	OTOG (ENSMMNG00015021531) #26	USH1C (ENSMMNG00015021503) #27	ABCC8 (ENSMMNG00015021473) #28	KCNJ11 (ENSMMNG00015021442) #29	ENSMMNG00015021437 #30	NUCB2 (ENSMMNG00015021400) #31	ENSMMNG00015021368	PIK3C2A (ENSMMNG00015021358) #33	RPS13 (ENSMMNG00015021335)	PLEKHA7 (ENSMMNG00015021305) #35	C11orf58 (ENSMMNG00015021280) #36	SOX6 (ENSMMNG00015021242)
Beluga whale	MODERN SPECIES	32	CSRP3 (ENSDLEG00000015409)	ZDHHC13 (ENSDLEG00000015429)	PTPN5 (ENSDLEG00000015461)	TMEM86A (ENSDLEG00000015500)	ENSDLEG00000015507	MISFA (ENSDLEG00000015517)	UEVLD (ENSDLEG00000015524)	ENSDLEG00000015553	TSG101 (ENSDLEG00000015564)	ENSDLEG00000015577	ENSDLEG00000015586	GTF2H1 (ENSDLEG00000015605)	HPS5 (ENSDLEG00000015626)	ENSDLEG00000015657 ##21	SAAL1 (ENSDLEG00000015675) #21	TPH1 (ENSDLEG00000015701) #22	SERGEF (ENSDLEG00000015727) #23	KCNC1 (ENSDLEG00000015743) #24	MYOD1 (ENSDLEG00000015755) #25	OTOG (ENSDLEG00000015797) #26	USH1C (ENSDLEG00000016116) #27	ABCC8 (ENSDLEG00000016659) #28	KCNJ11 (ENSDLEG00000020835) #29	ENSDLEG00000020840 #30	NUCB2 (ENSDLEG00000020854) #31	PIK3C2A (ENSDLEG00000020912) #33	ENSDLEG00000020962	RPS13 (ENSDLEG00000005358)	PLEKHA7 (ENSDLEG00000005386) #35	CUNH11orf58 (ENSDLEG00000005498) #36	SOX6 (ENSDLEG00000005509)
Vaquita	MODERN SPECIES	19	MISFA (ENSPSNG00000010875)	ENSPSNG00000010762	UEVLD (ENSPSNG00000010589)	TSG101 (ENSPSNG00000010472)	ENSPSNG00000010416	ENSPSNG00000010383	ENSPSNG00000010281	GTF2H1 (ENSPSNG00000010188)	HPS5 (ENSPSNG00000009992)	ENSPSNG00000009837 ##21	ENSPSNG00000009755 ##21	ENSPSNG00000009709 ##21	ENSPSNG00000009625 ##21	ENSPSNG00000009564 ##21	SAAL1 (ENSPSNG00000009495) #21	TPH1 (ENSPSNG00000009426) #22	SERGEF (ENSPSNG00000009362) #23	KCNC1 (ENSPSNG00000009240) #24	MYOD1 (ENSPSNG00000009194) #25	OTOG (ENSPSNG00000009133) #26	USH1C (ENSPSNG00000008836) #27	ABCC8 (ENSPSNG00000007231) #28	KCNJ11 (ENSPSNG00000006886) #29	ENSPSNG00000006848 #30	NUCB2 (ENSPSNG00000006795) #31	ENSPSNG00000006740	PIK3C2A (ENSPSNG00000006633) #33	PLEKHA7 (ENSPSNG00000006504) #35	C11orf58 (ENSPSNG00000006414) #36	SOX6 (ENSPSNG00000006212)	INSC (ENSPSNG00000005971)
Dolphin	MODERN SPECIES	230													ENSTTRG00000013902 ##21	ENSTTRG00000013900 ##21	SAAL1 (ENSTTRG00000013896) #21	TPH1 (ENSTTRG00000013891) #22	SERGEF (ENSTTRG00000013883) #23	KCNC1 (ENSTTRG00000013876) #24	MYOD1 (ENSTTRG00000013869) #25
Sperm whale	MODERN SPECIES	7	TMEM86A (ENSPCTG00005007580)	SPTY2D1 (ENSPCTG00005007559)	MISFA (ENSPCTG00005007534)	UEVLD (ENSPCTG00005007495)	TSG101 (ENSPCTG00005007406)	ENSPCTG00005007383	LDHC (ENSPCTG00005007321)	LDHA (ENSPCTG00005007271)	ENSPCTG00005007257	GTF2H1 (ENSPCTG00005007039)	HPS5 (ENSPCTG00005006903)	ENSPCTG00005006852 ##21	ENSPCTG00005006824 ##21	ENSPCTG00005006800 ##21	SAAL1 (ENSPCTG00005006752) #21	TPH1 (ENSPCTG00005006667) #22	SERGEF (ENSPCTG00005006546) #23	KCNC1 (ENSPCTG00005006503) #24	MYOD1 (ENSPCTG00005006484) #25	OTOG (ENSPCTG00005006334) #26	USH1C (ENSPCTG00005006223) #27	ABCC8 (ENSPCTG00005004712) #28	KCNJ11 (ENSPCTG00005004532) #29	ENSPCTG00005004506 #30	NUCB2 (ENSPCTG00005004244) #31	ENSPCTG00005015020	PIK3C2A (ENSPCTG00005014624) #33	ENSPCTG00005014567	RPS13 (ENSPCTG00005014477)	PLEKHA7 (ENSPCTG00005014003) #35	ENSPCTG00005013965
Blue whale	MODERN SPECIES	19	IGSF22 (ENSBMSG00010010054)	TMEM86A (ENSBMSG00010010029)	ENSBMSG00010010018	MISFA (ENSBMSG00010010000)	UEVLD (ENSBMSG00010009936)	ENSBMSG00010009877	ENSBMSG00010009854	LDHC (ENSBMSG00010009652)	ENSBMSG00010009579	GTF2H1 (ENSBMSG00010009536)	HPS5 (ENSBMSG00010009507)	ENSBMSG00010009483 ##21	ENSBMSG00010009474 ##21	ENSBMSG00010009467 ##21	SAAL1 (ENSBMSG00010012874) #21	TPH1 (ENSBMSG00010012841) #22	ENSBMSG00010012824	SERGEF (ENSBMSG00010012809) #23	KCNC1 (ENSBMSG00010012786) #24	MYOD1 (ENSBMSG00010012778) #25	OTOG (ENSBMSG00010012712) #26	USH1C (ENSBMSG00010012539) #27	ABCC8 (ENSBMSG00010012014) #28	KCNJ11 (ENSBMSG00010011930) #29	ENSBMSG00010011920 #30	NUCB2 (ENSBMSG00010011776) #31	ENSBMSG00010011741	PIK3C2A (ENSBMSG00010011707) #33	ENSBMSG00010011692	PLEKHA7 (ENSBMSG00010011591) #35	C11orf58 (ENSBMSG00010011553) #36
Camelidae	ANCESTRAL SPECIES	25	ENSGT01030000234639.A.b.a.b.a.b.b	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00990000212997	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Arabian camel	MODERN SPECIES	1	ENSCDRG00005011022	PTPN5 (ENSCDRG00005011174)	TMEM86A (ENSCDRG00005011463)	SPTY2D1 (ENSCDRG00005011497)	ENSCDRG00005011524	UEVLD (ENSCDRG00005011579)	TSG101 (ENSCDRG00005011857)	LDHC (ENSCDRG00005012071)	ENSCDRG00005013169	ENSCDRG00005013197	GTF2H1 (ENSCDRG00005013223)	HPS5 (ENSCDRG00005013369)	ENSCDRG00005013545	ENSCDRG00005013613 ##21	SAAL1 (ENSCDRG00005013646) #21	TPH1 (ENSCDRG00005013726) #22	SERGEF (ENSCDRG00005013823) #23	KCNC1 (ENSCDRG00005013940) #24	MYOD1 (ENSCDRG00005014006) #25	OTOG (ENSCDRG00005014084) #26	USH1C (ENSCDRG00005014521) #27	ABCC8 (ENSCDRG00005014728) #28	KCNJ11 (ENSCDRG00005015019) #29	NUCB2 (ENSCDRG00005015072) #31	PIK3C2A (ENSCDRG00005015424) #33	RPS13 (ENSCDRG00005015649)	PLEKHA7 (ENSCDRG00005015761) #35	C11orf58 (ENSCDRG00005016004) #36	SOX6 (ENSCDRG00005016113)	INSC (ENSCDRG00005016735)	ENSCDRG00005017047
Alpaca	MODERN SPECIES	296					TMEM86A (ENSVPAG00000010221)	SPTY2D1 (ENSVPAG00000010220)	UEVLD (ENSVPAG00000010219)	TSG101 (ENSVPAG00000010218)	LDHAL6A (ENSVPAG00000010217)	LDHC (ENSVPAG00000010216)	LDHA (ENSVPAG00000010215)	GTF2H1 (ENSVPAG00000010213)	HPS5 (ENSVPAG00000010212)	ENSVPAG00000010210	SAAL1 (ENSVPAG00000010209) #21	TPH1 (ENSVPAG00000010206) #22	SERGEF (ENSVPAG00000010204) #23
Suina	ANCESTRAL SPECIES	34	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Pig	MODERN SPECIES	10	PTPN5 (ENSSSCG00000013358)	TMEM86A (ENSSSCG00000013360)	SPTY2D1 (ENSSSCG00000013361)	MISFA (ENSSSCG00000038037)	UEVLD (ENSSSCG00000013362)	ENSSSCG00000041063	LDHC (ENSSSCG00000013363)	LDHA (ENSSSCG00000013366)	GTF2H1 (ENSSSCG00000013367)	ENSSSCG00000045256	ENSSSCG00000013369 ##21	ENSSSCG00000052907 ##21	ENSSSCG00000046269 ##21	ENSSSCG00000037358 ##21	SAAL1 (ENSSSCG00000035393) #21	TPH1 (ENSSSCG00000054840) #22	SERGEF (ENSSSCG00000042767) #23	KCNC1 (ENSSSCG00000013374) #24	MYOD1 (ENSSSCG00000013375) #25	OTOG (ENSSSCG00000013376) #26	USH1C (ENSSSCG00000013377) #27	ABCC8 (ENSSSCG00000013378) #28	KCNJ11 (ENSSSCG00000042162) #29	ENSSSCG00000013380 #31	PIK3C2A (ENSSSCG00000025406) #33	RPS13 (ENSSSCG00000013381)	PLEKHA7 (ENSSSCG00000013382) #35	C11orf58 (ENSSSCG00000040570) #36	SOX6 (ENSSSCG00000034191)	INSC (ENSSSCG00000013385)	ENSSSCG00000026512
Chacoan peccary	MODERN SPECIES	919	IGSF22 (ENSCWAG00000014237)	TMEM86A (ENSCWAG00000014433)	SPTY2D1 (ENSCWAG00000014459)	ENSCWAG00000014496	ENSCWAG00000014527	TSG101 (ENSCWAG00000014545)	LDHC (ENSCWAG00000014623)	ENSCWAG00000015128	ENSCWAG00000015145	ENSCWAG00000015174	GTF2H1 (ENSCWAG00000015209)	HPS5 (ENSCWAG00000015353)	SAA4 (ENSCWAG00000015410) ##21	ENSCWAG00000015451 ##21	SAAL1 (ENSCWAG00000015499) #21	TPH1 (ENSCWAG00000015561) #22	SERGEF (ENSCWAG00000015651) #23	KCNC1 (ENSCWAG00000015694) #24	MYOD1 (ENSCWAG00000015755) #25	OTOG (ENSCWAG00000015797) #26	USH1C (ENSCWAG00000016103) #27	ABCC8 (ENSCWAG00000016534) #28	KCNJ11 (ENSCWAG00000018360) #29	ENSCWAG00000018371 #30	NUCB2 (ENSCWAG00000018398) #31	PIK3C2A (ENSCWAG00000018580) #33	ENSCWAG00000018676	PLEKHA7 (ENSCWAG00000018738) #35	C11orf58 (ENSCWAG00000018946) #36	SOX6 (ENSCWAG00000018979)	INSC (ENSCWAG00000019215)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.b	ENSGT00940000175801	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Carnivora	ANCESTRAL SPECIES	7	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.m.b	ENSGT00940000153201.j.n	ENSGT01030000235549	ENSGT00940000153201.j.m.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.b	ENSGT00940000175801	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Caniformia	ANCESTRAL SPECIES	25	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.n	ENSGT01030000235549	ENSGT00940000153201.j.m.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.b	ENSGT00940000175801	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.m.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.m.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Giant Panda	MODERN SPECIES	7	PTPN5 (ENSAMEG00000017915)	IGSF22 (ENSAMEG00000017913)	TMEM86A (ENSAMEG00000017911)	SPTY2D1 (ENSAMEG00000017906)	ENSAMEG00000028723	MISFA (ENSAMEG00000017904)	UEVLD (ENSAMEG00000017885)	TSG101 (ENSAMEG00000017874)	LDHC (ENSAMEG00000017872)	ENSAMEG00000017854	GTF2H1 (ENSAMEG00000017836)	HPS5 (ENSAMEG00000017819)	ENSAMEG00000023602 ##21	ENSAMEG00000024218 ##21	SAAL1 (ENSAMEG00000018204) #21	TPH1 (ENSAMEG00000018200) #22	SERGEF (ENSAMEG00000028965) #23	KCNC1 (ENSAMEG00000018198) #24	MYOD1 (ENSAMEG00000018197) #25	OTOG (ENSAMEG00000003146) #26	USH1C (ENSAMEG00000003181) #27	ABCC8 (ENSAMEG00000003026) #28	KCNJ11 (ENSAMEG00000019510) #29	ENSAMEG00000003021 #30	NUCB2 (ENSAMEG00000002982) #31	PIK3C2A (ENSAMEG00000002916) #33	ENSAMEG00000002895	ENSAMEG00000002891	PLEKHA7 (ENSAMEG00000002856) #35	C11orf58 (ENSAMEG00000002845) #36	SOX6 (ENSAMEG00000015112)
Ursus	ANCESTRAL SPECIES	201															ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626.k #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Polar bear	MODERN SPECIES	327														ENSUMAG00000000113 ##21	SAAL1 (ENSUMAG00000023648) #21	TPH1 (ENSUMAG00000023633) #22	SERGEF (ENSUMAG00000023630) #23	KCNC1 (ENSUMAG00000023629) #24	MYOD1 (ENSUMAG00000023628) #25	OTOG (ENSUMAG00000023622) #26	USH1C (ENSUMAG00000023605) #27	ABCC8 (ENSUMAG00000023493) #28	KCNJ11 (ENSUMAG00000023484) #29	ENSUMAG00000023479 #30	NUCB2 (ENSUMAG00000023477) #31	PIK3C2A (ENSUMAG00000023475) #33	RPS13 (ENSUMAG00000023470)	PLEKHA7 (ENSUMAG00000023454) #35	C11orf58 (ENSUMAG00000023447) #36	SOX6 (ENSUMAG00000023422)	INSC (ENSUMAG00000023412)
Mustelinae	ANCESTRAL SPECIES	30	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479.e	ENSGT00940000153201.j.n	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
American mink	MODERN SPECIES	13	IGSF22 (ENSNVIG00000018521)	TM86A (ENSNVIG00000018560)	SPTY2D1 (ENSNVIG00000018574)	ENSNVIG00000018581	MISFA (ENSNVIG00000018586)	UEVLD (ENSNVIG00000018596)	ENSNVIG00000018751	LDHC (ENSNVIG00000018779)	ENSNVIG00000018827	TF2H1 (ENSNVIG00000018843)	HPS5 (ENSNVIG00000018867)	ENSNVIG00000018923 ##21	ENSNVIG00000018941 ##21	ENSNVIG00000018957 ##21	SAAL1 (ENSNVIG00000018995) #21	TPH1 (ENSNVIG00000019049) #22	SERGEF (ENSNVIG00000019122) #23	KCNC1 (ENSNVIG00000019159) #24	MYOD1 (ENSNVIG00000019177) #25	OTOG (ENSNVIG00000019193) #26	USH1C (ENSNVIG00000019256) #27	ABCC8 (ENSNVIG00000019489) #28	KCNJ11 (ENSNVIG00000020022) #29	B7H6 (ENSNVIG00000020028) #30	NUCB2 (ENSNVIG00000020065) #31	PIK3C2A (ENSNVIG00000020155) #33	RPS13 (ENSNVIG00000020246)	PLEKHA7 (ENSNVIG00000020293) #35	C11orf58 (ENSNVIG00000020393) #36	SOX6 (ENSNVIG00000020411)	INSC (ENSNVIG00000020515)
Ferret	MODERN SPECIES	194	ZDHHC13 (ENSMPUG00000013842)	ENSMPUG00000019449	PTPN5 (ENSMPUG00000013839)	IGSF22 (ENSMPUG00000013835)	TMEM86A (ENSMPUG00000013825)	SPTY2D1 (ENSMPUG00000013816)	UEVLD (ENSMPUG00000013774)	TSG101 (ENSMPUG00000013769)	ENSMPUG00000013766	ENSMPUG00000013730	GTF2H1 (ENSMPUG00000013729)	HPS5 (ENSMPUG00000013726)	ENSMPUG00000013724 ##21	ENSMPUG00000013721 ##21	SAAL1 (ENSMPUG00000013717) #21	TPH1 (ENSMPUG00000013571) #22	SERGEF (ENSMPUG00000013567) #23	KCNC1 (ENSMPUG00000013565) #24	MYOD1 (ENSMPUG00000013563) #25	OTOG (ENSMPUG00000013475) #26	USH1C (ENSMPUG00000013383) #27	ABCC8 (ENSMPUG00000013368) #28	KCNJ11 (ENSMPUG00000019000) #29	ENSMPUG00000013361 #30	NUCB2 (ENSMPUG00000013355) #31	PIK3C2A (ENSMPUG00000013343) #33	ENSMPUG00000013316	PLEKHA7 (ENSMPUG00000013304) #35	C11orf58 (ENSMPUG00000013301) #36	SOX6 (ENSMPUG00000013283)	ENSMPUG00000013278
Canidae	ANCESTRAL SPECIES	1	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.n.j	ENSGT01030000235549	ENSGT00940000153201.j.m.a.f	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.b	ENSGT00940000175801	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00940000154133.A	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.n.j	ENSGT01030000235549	ENSGT00940000153201.j.m.a.f	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b.n.a ##21	ENSGT00390000004737.b.a.o.a.a.a.a.c ##21	ENSGT00390000004737.b.a.o.a.a.a.b.m ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.b	ENSGT00940000175801	ENSGT00390000017491.t.u.a.b	ENSGT00940000155817.a.a #35	ENSGT00390000000687.e.b #36
Dog	MODERN SPECIES	13	SPTY2D1 (ENSCAFG00845018254)	ENSCAFG00845018219	MISFA (ENSCAFG00845018190)	ENSCAFG00845017589	UEVLD (ENSCAFG00845017016)	TSG101 (ENSCAFG00845016679)	LDHC (ENSCAFG00845016401)	ENSCAFG00845016146	ENSCAFG00845016105	GTF2H1 (ENSCAFG00845016048)	HPS5 (ENSCAFG00845015814)	ENSCAFG00845015612 ##21	SAA1 (ENSCAFG00845015494) ##21	ENSCAFG00845015397 ##21	SAAL1 (ENSCAFG00845015248) #21	TPH1 (ENSCAFG00845015143) #22	SERGEF (ENSCAFG00845015032) #23	KCNC1 (ENSCAFG00845014972) #24	MYOD1 (ENSCAFG00845014938) #25	OTOG (ENSCAFG00845014610) #26	USH1C (ENSCAFG00845014411) #27	ABCC8 (ENSCAFG00845014269) #28	KCNJ11 (ENSCAFG00845014223) #29	ENSCAFG00845014205 #30	NUCB2 (ENSCAFG00845014171) #31	ENSCAFG00845014128	PIK3C2A (ENSCAFG00845027085) #33	RPS13 (ENSCAFG00845026930)	PLEKHA7 (ENSCAFG00845025657) #35	C21H11orf58 (ENSCAFG00845025441) #36	SOX6 (ENSCAFG00845024251)
Dingo	MODERN SPECIES	231	SPTY2D1 (ENSCAFG00020018850)	MISFA (ENSCAFG00020018848)	UEVLD (ENSCAFG00020018838)	ENSCAFG00020018792	ENSCAFG00020018780	LDHC (ENSCAFG00020018722)	ENSCAFG00020018694	GTF2H1 (ENSCAFG00020018689)	HPS5 (ENSCAFG00020018444)	ENSCAFG00020018420 ##21	ENSCAFG00020018417 ##21	ENSCAFG00020018412 ##21	ENSCAFG00020018410 ##21	ENSCAFG00020018409 ##21	SAAL1 (ENSCAFG00020018406) #21	TPH1 (ENSCAFG00020018391) #22	SERGEF (ENSCAFG00020018379) #23	KCNC1 (ENSCAFG00020018373) #24	MYOD1 (ENSCAFG00020018371) #25	OTOG (ENSCAFG00020018311) #26	USH1C (ENSCAFG00020018102) #27	ABCC8 (ENSCAFG00020017543) #28	KCNJ11 (ENSCAFG00020017466) #29	ENSCAFG00020017465	ENSCAFG00020017461 #30	NUCB2 (ENSCAFG00020017444) #31	ENSCAFG00020017434 #33	ENSCAFG00020017417 #33	ENSCAFG00020017410	ENSCAFG00020017408	PLEKHA7 (ENSCAFG00020017394) #35
Red fox	MODERN SPECIES	70													ENSVVUG00000023969 ##21	ENSVVUG00000023973 ##21	SAAL1 (ENSVVUG00000023978) #21	TPH1 (ENSVVUG00000023982) #22	SERGEF (ENSVVUG00000023986) #23	KCNC1 (ENSVVUG00000023991) #24	MYOD1 (ENSVVUG00000023995) #25	OTOG (ENSVVUG00000024003) #26	USH1C (ENSVVUG00000024033) #27	ABCC8 (ENSVVUG00000024039) #28	KCNJ11 (ENSVVUG00000024056) #29	ENSVVUG00000024057 #30	NUCB2 (ENSVVUG00000024060) #31	PIK3C2A (ENSVVUG00000024074) #33	RPS13 (ENSVVUG00000024098)	PLEKHA7 (ENSVVUG00000024123) #35	ENSVVUG00000024192 #36	SOX6 (ENSVVUG00000024203)	INSC (ENSVVUG00000024215)
Felidae	ANCESTRAL SPECIES		ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.m.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684.g #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.j.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.m.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b.l ##21	ENSGT00390000004737.b.a.o.a.a.a.a.g ##21	ENSGT00390000004737.b.a.o.a.a.a.a.h ##21	ENSGT00390000004737.b.a.o.a.a.a.b.k ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684.g #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.j.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.m.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b.l ##21	ENSGT00390000004737.b.a.o.a.a.a.a.g ##21	ENSGT00390000004737.b.a.o.a.a.a.a.h ##21	ENSGT00390000004737.b.a.o.a.a.a.b.k ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684.g #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u.j.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
lion	MODERN SPECIES	10	PTPN5 (ENSPLOG00000017060)	IGSF22 (ENSPLOG00000016855)	TMEM86A (ENSPLOG00000016800)	SPTY2D1 (ENSPLOG00000016758)	ENSPLOG00000016726	MISFA (ENSPLOG00000016698)	UEVLD (ENSPLOG00000016574)	TSG101 (ENSPLOG00000016477)	LDHC (ENSPLOG00000016357)	ENSPLOG00000016282	GTF2H1 (ENSPLOG00000016181)	HPS5 (ENSPLOG00000016112)	ENSPLOG00000016063 ##21	ENSPLOG00000016007 ##21	SAAL1 (ENSPLOG00000015945) #21	TPH1 (ENSPLOG00000015838) #22	SERGEF (ENSPLOG00000015624) #23	KCNC1 (ENSPLOG00000015532) #24	MYOD1 (ENSPLOG00000015478) #25	OTOG (ENSPLOG00000014950) #26	USH1C (ENSPLOG00000014009) #27	ABCC8 (ENSPLOG00000011679) #28	KCNJ11 (ENSPLOG00000011463) #29	ENSPLOG00000011439 #30	NUCB2 (ENSPLOG00000011132) #31	ENSPLOG00000011047	PIK3C2A (ENSPLOG00000010953) #33	RPS13 (ENSPLOG00000010890)	PLEKHA7 (ENSPLOG00000010586) #35	C11orf58 (ENSPLOG00000010495) #36	ENSPLOG00000010453
leopard	MODERN SPECIES	29	SPTY2D1 (ENSPPRG00000001541)	ENSPPRG00000001886	UEVLD (ENSPPRG00000003736)	TSG101 (ENSPPRG00000004620)	ENSPPRG00000006170	ENSPPRG00000008586	LDHC (ENSPPRG00000010475)	ENSPPRG00000014382	GTF2H1 (ENSPPRG00000020251)	HPS5 (ENSPPRG00000022226)	ENSPPRG00000024363 ##21	ENSPPRG00000024065 ##21	ENSPPRG00000023577 ##21	ENSPPRG00000000993 ##21	SAAL1 (ENSPPRG00000001488) #21	TPH1 (ENSPPRG00000001846) #22	SERGEF (ENSPPRG00000003386) #23	KCNC1 (ENSPPRG00000003611) #24	MYOD1 (ENSPPRG00000003796) #25	OTOG (ENSPPRG00000010741) #26	USH1C (ENSPPRG00000014239) #27	ABCC8 (ENSPPRG00000000376) #28	KCNJ11 (ENSPPRG00000017642) #29	ENSPPRG00000001001	ENSPPRG00000001436 #30	NUCB2 (ENSPPRG00000003722) #31	ENSPPRG00000004343	PIK3C2A (ENSPPRG00000004750) #33	ENSPPRG00000005193	PLEKHA7 (ENSPPRG00000008439) #35	C11orf58 (ENSPPRG00000009350) #36
Tiger	MODERN SPECIES	586	TMEM86A (ENSPTIG00000020012)	SPTY2D1 (ENSPTIG00000019614)	ENSPTIG00000019097	UEVLD (ENSPTIG00000013958)	TSG101 (ENSPTIG00000011586)	ENSPTIG00000011335	LDHC (ENSPTIG00000007918)	LDHA (ENSPTIG00000016734)	GTF2H1 (ENSPTIG00000015340)	HPS5 (ENSPTIG00000010507)	ENSPTIG00000010049 ##21	ENSPTIG00000008520 ##21	ENSPTIG00000005766 ##21	ENSPTIG00000005385 ##21	SAAL1 (ENSPTIG00000020213) #21	TPH1 (ENSPTIG00000019857) #22	SERGEF (ENSPTIG00000016255) #23	KCNC1 (ENSPTIG00000014448) #24	ENSPTIG00000013033 #26
Cat	MODERN SPECIES	241	PTPN5 (ENSFCAG00000002890)	IGSF22 (ENSFCAG00000043784)	TMEM86A (ENSFCAG00000015745)	SPTY2D1 (ENSFCAG00000015743)	ENSFCAG00000048198	MISFA (ENSFCAG00000035445)	UEVLD (ENSFCAG00000015742)	TSG101 (ENSFCAG00000028742)	LDHC (ENSFCAG00000034264)	LDHA (ENSFCAG00000015735)	GTF2H1 (ENSFCAG00000007117)	HPS5 (ENSFCAG00000011158)	ENSFCAG00000042268 ##21	ENSFCAG00000046392 ##21	SAAL1 (ENSFCAG00000000210) #21	TPH1 (ENSFCAG00000025053) #22	SERGEF (ENSFCAG00000000209) #23	KCNC1 (ENSFCAG00000004974) #24	MYOD1 (ENSFCAG00000004973) #25	OTOG (ENSFCAG00000004972) #26	USH1C (ENSFCAG00000004971) #27	ABCC8 (ENSFCAG00000004967) #28	KCNJ11 (ENSFCAG00000007305) #29	NCR3LG1 (ENSFCAG00000023665) #30	NUCB2 (ENSFCAG00000007304) #31	PIK3C2A (ENSFCAG00000023161) #33	ENSFCAG00000042979	ENSFCAG00000033219	PLEKHA7 (ENSFCAG00000007029) #35	CD1H11orf58 (ENSFCAG00000036407) #36	SOX6 (ENSFCAG00000002214)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Equus	ANCESTRAL SPECIES	40	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.f.a.b ##21	ENSGT00390000004737.b.a.o.a.a.b.fb.a ##21	ENSGT00390000004737.b.a.o.a.a.b.eb.b ##21	ENSGT01030000234639.A.b.a.b.a.b.b.e.b.a	ENSGT00390000004737.b.a.o.a.b.e ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Horse	MODERN SPECIES	28	ENSECAG00000050200	UEVLD (ENSECAG00000009898)	TSG101 (ENSECAG00000004362)	LDHC (ENSECAG00000022126)	LDHA (ENSECAG00000020669)	GTF2H1 (ENSECAG00000019056)	HPS5 (ENSECAG00000015720)	ENSECAG00000036499 ##21	ENSECAG00000048632 ##21	ENSECAG00000034393	ENSECAG00000013758 ##21	ENSECAG00000030592 ##21	ENSECAG00000032096 ##21	ENSECAG00000011404 ##21	SAAL1 (ENSECAG00000009781) #21	SERGEF (ENSECAG00000005626) #22	SERGEF (ENSECAG00000056096) #23	KCNC1 (ENSECAG00000002236) #24	MYOD1 (ENSECAG00000002132) #25	OTOG (ENSECAG00000025047) #26	USH1C (ENSECAG00000024745) #27	ABCC8 (ENSECAG00000020074) #28	KCNJ11 (ENSECAG00000001643) #29	ENSECAG00000054585 #30	NUCB2 (ENSECAG00000016586) #31	PIK3C2A (ENSECAG00000014963) #33	RPS13 (ENSECAG00000014928)	PLEKHA7 (ENSECAG00000011848) #35	C7H11orf58 (ENSECAG00000011778) #36	ENSECAG00000050226	SOX6 (ENSECAG00000010880)
Donkey	MODERN SPECIES	12	LDHC (ENSEASG00005012917)	LDHA (ENSEASG00005012914)	GTF2H1 (ENSEASG00005012908)	HPS5 (ENSEASG00005012900)	ENSEASG00005026588 ##21	ENSEASG00005035302 ##21	ENSEASG00005035911 ##21	ENSEASG00005037086 ##21	ENSEASG00005012966	ENSEASG00005031856 ##21	ENSEASG00005034187 ##21	ENSEASG00005030092 ##21	ENSEASG00005023828 ##21	ENSEASG00005007576 ##21	ENSEASG00005007574 #21	TPH1 (ENSEASG00005007573) #22	SERGEF (ENSEASG00005007572) #23	KCNC1 (ENSEASG00005007570) #24	MYOD1 (ENSEASG00005007569) #25	OTOG (ENSEASG00005007567) #26	USH1C (ENSEASG00005007566) #27	ABCC8 (ENSEASG00005007029) #28	KCNJ11 (ENSEASG00005032263) #29	ENSEASG00005006925 #30	NUCB2 (ENSEASG00005006907) #31	PIK3C2A (ENSEASG00005006116) #33	ENSEASG00005006041	PLEKHA7 (ENSEASG00005006038) #35	C11orf58 (ENSEASG00005033834) #36	SOX6 (ENSEASG00005006024)	INSC (ENSEASG00005006018)
Chiroptera	ANCESTRAL SPECIES	5	ENSGT01030000234639.A.b.a.b.a.b.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT01030000234639.A.b.a.b.a.b.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242.a	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.u	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Microbat	MODERN SPECIES	1061	ENSMLUG00000024241	PTPN5 (ENSMLUG00000016411)	IGSF22 (ENSMLUG00000016399)	TMEM86A (ENSMLUG00000016391)	ENSMLUG00000027941	UEVLD (ENSMLUG00000016358)	TSG101 (ENSMLUG00000016353)	LDHC (ENSMLUG00000016348)	ENSMLUG00000016343	GTF2H1 (ENSMLUG00000016329)	HPS5 (ENSMLUG00000016318)	ENSMLUG00000008051 ##21	ENSMLUG00000016314 ##21	ENSMLUG00000028709 ##21	SAAL1 (ENSMLUG00000008022) #21	TPH1 (ENSMLUG00000008011) #22	ENSMLUG00000007974 #23	KCNC1 (ENSMLUG00000007950) #24	MYOD1 (ENSMLUG00000007940) #25	ENSMLUG00000029772	OTOG (ENSMLUG00000002545) #26	USH1C (ENSMLUG00000002529) #27	ABCC8 (ENSMLUG00000012276) #28	NUCB2 (ENSMLUG00000004101) #31	KCNJ11 (ENSMLUG00000012273) #29	ENSMLUG00000024625	ENSMLUG00000029239	PIK3C2A (ENSMLUG00000007089) #33	ENSMLUG00000009751	PLEKHA7 (ENSMLUG00000001591) #35	C11orf58 (ENSMLUG00000001589) #36
Greater horseshoe bat	MODERN SPECIES	2	IGSF22 (ENSRFEG00010019473)	TMEM86A (ENSRFEG00010019663)	SPTY2D1 (ENSRFEG00010019685)	ENSRFEG00010019723	ENSRFEG00010019776	ENSRFEG00010019955	LDHC (ENSRFEG00010020017)	ENSRFEG00010020271	GTF2H1 (ENSRFEG00010020416)	HPS5 (ENSRFEG00010020475)	ENSRFEG00010020515 ##21	ENSRFEG00010020556 ##21	ENSRFEG00010020584 ##21	ENSRFEG00010020599 ##21	SAAL1 (ENSRFEG00010020641) #21	TPH1 (ENSRFEG00010020684) #22	SERGEF (ENSRFEG00010020728) #23	ENSRFEG00010020796	KCNC1 (ENSRFEG00010020809) #24	MYOD1 (ENSRFEG00010020830) #25	OTOG (ENSRFEG00010020852) #26	USH1C (ENSRFEG00010020886) #27	ABCC8 (ENSRFEG00010020943) #28	ENSRFEG00010020967	KCNJ11 (ENSRFEG00010020978) #29	ENSRFEG00010020981 #30	NUCB2 (ENSRFEG00010021004) #31	PIK3C2A (ENSRFEG00010021091) #33	ENSRFEG00010021136	PLEKHA7 (ENSRFEG00010021179) #35	C11orf58 (ENSRFEG00010021253) #36
Megabat	MODERN SPECIES	2033														ENSPVAG00000012844 ##21	SAAL1 (ENSPVAG00000012842) #21	TPH1 (ENSPVAG00000012838) #22	SERGEF (ENSPVAG00000012835) #23	KCNC1 (ENSPVAG00000012831) #24	MYOD1 (ENSPVAG00000012829) #25	OTOG (ENSPVAG00000012824) #26	USH1C (ENSPVAG00000012818) #27	ABCC8 (ENSPVAG00000012814) #28	ENSPVAG00000012812 #30	NUCB2 (ENSPVAG00000012810) #31	PIK3C2A (ENSPVAG00000012807) #33	RPS13 (ENSPVAG00000012806)	PLEKHA7 (ENSPVAG00000012804) #35
Eulipotyphla	ANCESTRAL SPECIES	602															ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23
Common shrew	MODERN SPECIES	1994																TPH1 (ENSSARG00000001001) #22	SERGEF (ENSSARG00000000979) #23
Hedgehog	MODERN SPECIES	3103															SAAL1 (ENSEEUG00000009579) #21	TPH1 (ENSEEUG00000009504) #22
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00940000153201.j.k.a.b	ENSGT01030000235549	ENSGT00940000153201.j.l	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Primates	ANCESTRAL SPECIES		ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.a.a	ENSGT00940000153201.j.k.a.b	ENSGT01030000235549	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.b	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.b	ENSGT01030000235549	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Mouse lemur	MODERN SPECIES	27	SPTY2D1 (ENSMICG00000017602)	ENSMICG00000027423	ENSMICG00000003117	TSG101 (ENSMICG00000008879)	LDHAL6A (ENSMICG00000008876)	LDHC (ENSMICG00000009475)	LDHA (ENSMICG00000029727)	ENSMICG00000036424	GTF2H1 (ENSMICG00000009467)	HPS5 (ENSMICG00000005626)	SAA4 (ENSMICG00000036934) ##21	ENSMICG00000005619 ##21	ENSMICG00000042946 ##21	ENSMICG00000042509 ##21	SAAL1 (ENSMICG00000005592) #21	TPH1 (ENSMICG00000005586) #22	SERGEF (ENSMICG00000005579) #23	KCNC1 (ENSMICG00000005569) #24	MYOD1 (ENSMICG00000005566) #25	OTOG (ENSMICG00000005555) #26	USH1C (ENSMICG00000005547) #27	ABCC8 (ENSMICG00000005522) #28	KCNJ11 (ENSMICG00000005520) #29	NUCB2 (ENSMICG00000005512) #31	ENSMICG00000037789	PIK3C2A (ENSMICG00000003718) #33	ENSMICG00000031241	PLEKHA7 (ENSMICG00000003710) #35	ENSMICG00000027883 #36	SOX6 (ENSMICG00000027413)	INSC (ENSMICG00000008907)
Lemuriformes_a	ANCESTRAL SPECIES	24	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.k.a.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Coquerels sifaka	MODERN SPECIES	591	PTPN5 (ENSPCOG00000018291)	IGSF22 (ENSPCOG00000021301)	TMEM86A (ENSPCOG00000015643)	SPTY2D1 (ENSPCOG00000020606)	ENSPCOG00000015051	UEVLD (ENSPCOG00000016777)	TSG101 (ENSPCOG00000022058)	ENSPCOG00000022047	ENSPCOG00000025606	GTF2H1 (ENSPCOG00000016794)	HPS5 (ENSPCOG00000018482)	SAA4 (ENSPCOG00000014650) ##21	ENSPCOG00000008984 ##21	ENSPCOG00000023938 ##21	SAAL1 (ENSPCOG00000013362) #21	TPH1 (ENSPCOG00000022787) #22	SERGEF (ENSPCOG00000015228) #23	KCNC1 (ENSPCOG00000028118) #24	MYOD1 (ENSPCOG00000028149) #25	OTOG (ENSPCOG00000023596) #26	USH1C (ENSPCOG00000024567) #27	ABCC8 (ENSPCOG00000018480) #28	KCNJ11 (ENSPCOG00000009073) #29	ENSPCOG00000015410 #31	PIK3C2A (ENSPCOG00000009463) #33	ENSPCOG00000024432	PLEKHA7 (ENSPCOG00000020850) #35	ENSPCOG00000016080	C11orf58 (ENSPCOG00000012109) #36	SOX6 (ENSPCOG00000008289)	INSC (ENSPCOG00000024807)
Greater bamboo lemur	MODERN SPECIES	708														ENSPSMG00000010777 ##21	SAAL1 (ENSPSMG00000010764) #21	TPH1 (ENSPSMG00000010741) #22	SERGEF (ENSPSMG00000010715) #23	KCNC1 (ENSPSMG00000010686) #24	MYOD1 (ENSPSMG00000010680) #25	OTOG (ENSPSMG00000010669) #26	USH1C (ENSPSMG00000010622) #27	ABCC8 (ENSPSMG00000009601) #28	KCNJ11 (ENSPSMG00000008899) #29	NUCB2 (ENSPSMG00000008836) #31	PIK3C2A (ENSPSMG00000008738) #33	ENSPSMG00000008669	PLEKHA7 (ENSPSMG00000008661) #35	ENSPSMG00000008607 #36	SOX6 (ENSPSMG00000008573)	INSC (ENSPSMG00000008493)	CALCB (ENSPSMG00000008444)
Bushbaby	MODERN SPECIES	116	ENSOGAG00000032813	PTPN5 (ENSOGAG00000016683)	IGSF22 (ENSOGAG00000008964)	TMEM86A (ENSOGAG00000004415)	SPTY2D1 (ENSOGAG00000031814)	ENSOGAG00000009268	TSG101 (ENSOGAG00000009264)	LDHAL6A (ENSOGAG00000009261)	LDHC (ENSOGAG00000003725)	GTF2H1 (ENSOGAG00000000710)	HPS5 (ENSOGAG00000011208)	ENSOGAG00000011206 ##21	ENSOGAG00000027885	ENSOGAG00000029424 ##21	SAAL1 (ENSOGAG00000011202) #21	TPH1 (ENSOGAG00000011200) #22	SERGEF (ENSOGAG00000011195) #23	KCNC1 (ENSOGAG00000011185) #24	MYOD1 (ENSOGAG00000029784) #25	OTOG (ENSOGAG00000033908) #26	USH1C (ENSOGAG00000006113) #27	ABCC8 (ENSOGAG00000006103) #28	KCNJ11 (ENSOGAG00000029803) #29	ENSOGAG00000032142	NUCB2 (ENSOGAG00000006094) #31	ENSOGAG00000028675	PIK3C2A (ENSOGAG00000002129) #33	RPS13 (ENSOGAG00000002128)	PLEKHA7 (ENSOGAG00000013719) #35	C11orf58 (ENSOGAG00000025335) #36	SOX6 (ENSOGAG00000005358)
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Tarsier	MODERN SPECIES	5235								ENSTSYG00000026426	LDHA (ENSTSYG00000008062)	GTF2H1 (ENSTSYG00000003798)	HPS5 (ENSTSYG00000009261)	ENSTSYG00000011975 ##21	ENSTSYG00000027954 ##21	SAA4 (ENSTSYG00000013983) ##21	SAAL1 (ENSTSYG00000003254) #21	TPH1 (ENSTSYG00000012348) #22	SERGEF (ENSTSYG00000012345) #23
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000154770.q.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.a.a.f.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.g	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.e	ENSGT00440000038603.n	ENSGT00940000155817.a.a #35	ENSGT00390000000687.u #36	ENSGT00940000153272.a.b.o.b.a
Cebidae	ANCESTRAL SPECIES		ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000154770.q.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.a.a.f.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.g	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.e	ENSGT00440000038603.n	ENSGT00940000155817.a.a #35	ENSGT00390000000687.u #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687.v #36
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00390000007101.d.b	ENSGT00940000154133.A.i	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000154770.q.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.a.a.f.a.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.g	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.e	ENSGT00440000038603.n	ENSGT00940000155817.a.a #35	ENSGT00390000000687.u #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00390000000687.v #36
Capuchin	MODERN SPECIES	39	UEVLD (ENSCCAG00000036814)	ENSCCAG00000033011	TSG101 (ENSCCAG00000036169)	ENSCCAG00000020722	LDHAL6A (ENSCCAG00000031041)	LDHC (ENSCCAG00000031200)	ENSCCAG00000029060	ENSCCAG00000028937	GTF2H1 (ENSCCAG00000028407)	HPS5 (ENSCCAG00000032081)	ENSCCAG00000024577 ##21	ENSCCAG00000024041 ##21	SAA4 (ENSCCAG00000025050) ##21	ENSCCAG00000022385	SAAL1 (ENSCCAG00000025101) #21	TPH1 (ENSCCAG00000023915) #22	SERGEF (ENSCCAG00000037352) #23	KCNC1 (ENSCCAG00000033090) #24	MYOD1 (ENSCCAG00000036433) #25	OTOG (ENSCCAG00000027583) #26	USH1C (ENSCCAG00000030798) #27	ABCC8 (ENSCCAG00000029653) #28	KCNJ11 (ENSCCAG00000019232) #29	NUCB2 (ENSCCAG00000029832) #31	PIK3C2A (ENSCCAG00000034614) #33	RPS13 (ENSCCAG00000022959)	ENSCCAG00000031641	PLEKHA7 (ENSCCAG00000030437) #35	ENSCCAG00000037894 #36	ENSCCAG00000035901	SOX6 (ENSCCAG00000034832)
Bolivian squirrel monkey	MODERN SPECIES	42	TMEM86A (ENSSBOG00000022647)	SPTY2D1 (ENSSBOG00000019822)	ENSSBOG00000018184	UEVLD (ENSSBOG00000020574)	ENSSBOG00000023915	ENSSBOG00000016234	TSG101 (ENSSBOG00000032898)	LDHAL6A (ENSSBOG00000032789)	LDHC (ENSSBOG00000029573)	ENSSBOG00000023979	GTF2H1 (ENSSBOG00000035194)	HPS5 (ENSSBOG00000034848)	ENSSBOG00000025130 ##21	SAA4 (ENSSBOG00000035220) ##21	SAAL1 (ENSSBOG00000000873) #21	TPH1 (ENSSBOG00000021704) #22	SERGEF (ENSSBOG00000021636) #23	KCNC1 (ENSSBOG00000032934) #24	MYOD1 (ENSSBOG00000032168) #25	OTOG (ENSSBOG00000031057) #26	USH1C (ENSSBOG00000030041) #27	ABCC8 (ENSSBOG00000021007) #28	KCNJ11 (ENSSBOG00000016143) #29	NUCB2 (ENSSBOG00000022407) #31	PIK3C2A (ENSSBOG00000020550) #33	RPS13 (ENSSBOG00000031967)	ENSSBOG00000029329	PLEKHA7 (ENSSBOG00000035289) #35	C11orf58 (ENSSBOG00000024393) #36	SOX6 (ENSSBOG00000032558)	INSC (ENSSBOG00000010393)
Marmoset	MODERN SPECIES	2	SPTY2D1 (ENSCJAG00000006985)	ENSCJAG00000080960	ENSCJAG00000075110	UEVLD (ENSCJAG00000007006)	TSG101 (ENSCJAG00000086769)	LDHAL6A (ENSCJAG00000007067)	ENSCJAG00000080933	LDHC (ENSCJAG00000007081)	GTF2H1 (ENSCJAG00000007129)	ENSCJAG00000074922	HPS5 (ENSCJAG00000007185)	ENSCJAG00000007204 ##21	ENSCJAG00000081433 ##21	SAA4 (ENSCJAG00000007213) ##21	ENSCJAG00000043934	ENSCJAG00000007283 #22	KCNC1 (ENSCJAG00000007290) #24	MYOD1 (ENSCJAG00000009258) #25	OTOG (ENSCJAG00000009263) #26	USH1C (ENSCJAG00000009310) #27	ABCC8 (ENSCJAG00000009368) #28	KCNJ11 (ENSCJAG00000048022) #29	NUCB2 (ENSCJAG00000009422) #31	PIK3C2A (ENSCJAG00000009472) #33	ENSCJAG00000009564	ENSCJAG00000080001	PLEKHA7 (ENSCJAG00000009589) #35	C11orf58 (ENSCJAG00000041748) #36	ENSCJAG00000080150	SOX6 (ENSCJAG00000009643)	ENSCJAG00000084026
Mas night monkey	MODERN SPECIES	830	TMEM86A (ENSANAG00000019649)	SPTY2D1 (ENSANAG00000008192)	ENSANAG00000024616	UEVLD (ENSANAG00000027080)	ENSANAG00000022035	TSG101 (ENSANAG00000019676)	LDHAL6A (ENSANAG00000023203)	LDHC (ENSANAG00000037671)	ENSANAG00000037705	GTF2H1 (ENSANAG00000023697)	HPS5 (ENSANAG00000018225)	ENSANAG00000021057 ##21	SAA4 (ENSANAG00000020818) ##21	ENSANAG00000021597	SAAL1 (ENSANAG00000036857) #21	TPH1 (ENSANAG00000018818) #22	SERGEF (ENSANAG00000036496) #23	KCNC1 (ENSANAG00000034875) #24	MYOD1 (ENSANAG00000032905) #25	OTOG (ENSANAG00000035931) #26	USH1C (ENSANAG00000033372) #27	ABCC8 (ENSANAG00000034619) #28	KCNJ11 (ENSANAG00000017323) #29	NCR3LG1 (ENSANAG00000021049) #30	NUCB2 (ENSANAG00000033132) #31	PIK3C2A (ENSANAG00000036198) #33	ENSANAG00000029343	RPS13 (ENSANAG00000026703)	ENSANAG00000028185	PLEKHA7 (ENSANAG00000015437) #35	C11orf58 (ENSANAG00000027455) #36
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Hominoidea	ANCESTRAL SPECIES	1	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.c.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00390000000566.q.a.a	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.c.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00390000000566.q.a.a	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.db ##21	ENSGT00390000004737.b.a.o.a.b.c.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT00940000155182.b.e.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00390000000566.q.a.a	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687.w.a #36	ENSGT00940000153272.a.b.o.b.a
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.cb.a ##21	ENSGT00390000004737.b.a.o.a.b.c.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT00940000155182.b.e.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00390000000566.q.a.a	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687.w.a #36	ENSGT00940000153272.a.b.o.b.a
Pan	ANCESTRAL SPECIES	1	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.cb.a ##21	ENSGT00390000001347.wb	ENSGT00390000004737.b.a.o.a.b.c.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT00940000155182.b.e.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00390000000566.q.a.a	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687.w.a #36	ENSGT00940000153272.a.b.o.b.a
Chimpanzee	MODERN SPECIES	2	TSG101 (ENSPTRG00000003424)	LDHAL6A (ENSPTRG00000003423)	LDHC (ENSPTRG00000003422)	LDHA (ENSPTRG00000003421)	GTF2H1 (ENSPTRG00000003420)	HPS5 (ENSPTRG00000003419)	SAA1 (ENSPTRG00000022627) ##21	ENSPTRG00000052833	SAA2 (ENSPTRG00000003416) ##21	SAA4 (ENSPTRG00000003415) ##21	ENSPTRG00000050361	ENSPTRG00000039747	MRGPRX4 (ENSPTRG00000045402)	MRGPRX3 (ENSPTRG00000052640)	SAAL1 (ENSPTRG00000003410) #21	TPH1 (ENSPTRG00000003409) #22	SERGEF (ENSPTRG00000003408) #23	KCNC1 (ENSPTRG00000003407) #24	MYOD1 (ENSPTRG00000003406) #25	OTOG (ENSPTRG00000003405) #26	USH1C (ENSPTRG00000003404) #27	ENSPTRG00000048594	ABCC8 (ENSPTRG00000003403) #28	KCNJ11 (ENSPTRG00000028707) #29	NCR3LG1 (ENSPTRG00000003401) #30	NUCB2 (ENSPTRG00000003400) #31	PIK3C2A (ENSPTRG00000003399) #33	RPS13 (ENSPTRG00000044626)	PLEKHA7 (ENSPTRG00000003396) #35	C11H11orf58 (ENSPTRG00000044196) #36	ENSPTRG00000043419
Bonobo	MODERN SPECIES	2	UEVLD (ENSPPAG00000028010)	TSG101 (ENSPPAG00000032909)	LDHAL6A (ENSPPAG00000021825)	LDHC (ENSPPAG00000038065)	LDHA (ENSPPAG00000043477)	GTF2H1 (ENSPPAG00000029804)	HPS5 (ENSPPAG00000039372)	SAA1 (ENSPPAG00000039165) ##21	ENSPPAG00000041426	ENSPPAG00000031094 ##21	SAA4 (ENSPPAG00000036586) ##21	ENSPPAG00000039649	MRGPRX4 (ENSPPAG00000008504)	MRGPRX3 (ENSPPAG00000011150)	SAAL1 (ENSPPAG00000035982) #21	TPH1 (ENSPPAG00000038830) #22	ENSPPAG00000041411 #23	KCNC1 (ENSPPAG00000006765) #24	MYOD1 (ENSPPAG00000036477) #25	OTOG (ENSPPAG00000027834) #26	USH1C (ENSPPAG00000028696) #27	ENSPPAG00000035879	ABCC8 (ENSPPAG00000026555) #28	KCNJ11 (ENSPPAG00000016577) #29	NCR3LG1 (ENSPPAG00000038825) #30	NUCB2 (ENSPPAG00000041653) #31	PIK3C2A (ENSPPAG00000039156) #33	ENSPPAG00000039874	PLEKHA7 (ENSPPAG00000041353) #35	C11orf58 (ENSPPAG00000035335) #36	ENSPPAG00000035221
Human	MODERN SPECIES	2	MISFA (ENSG00000247595)	UEVLD (ENSG00000151116)	TSG101 (ENSG00000074319)	LDHAL6A (ENSG00000166800)	LDHC (ENSG00000166796)	LDHA (ENSG00000134333)	GTF2H1 (ENSG00000110768)	HPS5 (ENSG00000110756)	SAA1 (ENSG00000173432) ##21	SAA2 (ENSG00000134339) ##21	SAA2-SAA4 (ENSG00000255071)	SAA4 (ENSG00000148965) ##21	MRGPRX4 (ENSG00000179817)	MRGPRX3 (ENSG00000179826)	SAAL1 (ENSG00000166788) #21	TPH1 (ENSG00000129167) #22	SERGEF (ENSG00000129158) #23	KCNC1 (ENSG00000129159) #24	MYOD1 (ENSG00000129152) #25	OTOG (ENSG00000188162) #26	USH1C (ENSG00000006611) #27	ABCC8 (ENSG00000006071) #28	KCNJ11 (ENSG00000187486) #29	NCR3LG1 (ENSG00000188211) #30	NUCB2 (ENSG00000070081) #31	PIK3C2A (ENSG00000011405) #33	RPS13 (ENSG00000110700)	PLEKHA7 (ENSG00000166689) #35	C11orf58 (ENSG00000110696) #36	SOX6 (ENSG00000110693)	INSC (ENSG00000188487)
Gorilla	MODERN SPECIES	2	ENSGGOG00000043165	UEVLD (ENSGGOG00000010367)	TSG101 (ENSGGOG00000010359)	LDHAL6A (ENSGGOG00000039584)	LDHC (ENSGGOG00000015884)	LDHA (ENSGGOG00000010350)	GTF2H1 (ENSGGOG00000008405)	HPS5 (ENSGGOG00000010309)	ENSGGOG00000006531 ##21	ENSGGOG00000010297	SAA2 (ENSGGOG00000010301) ##21	SAA4 (ENSGGOG00000003359) ##21	ENSGGOG00000025669	ENSGGOG00000039414	MRGPRX4 (ENSGGOG00000016538)	TPH1 (ENSGGOG00000009041) #22	SERGEF (ENSGGOG00000000685) #23	KCNC1 (ENSGGOG00000015717) #24	MYOD1 (ENSGGOG00000008222) #25	OTOG (ENSGGOG00000016024) #26	USH1C (ENSGGOG00000016001) #27	ENSGGOG00000039510	ABCC8 (ENSGGOG00000015972) #28	KCNJ11 (ENSGGOG00000003700) #29	NCR3LG1 (ENSGGOG00000022788) #30	NUCB2 (ENSGGOG00000005914) #31	PIK3C2A (ENSGGOG00000011040) #33	RPS13 (ENSGGOG00000007450)	PLEKHA7 (ENSGGOG00000006435) #35	ENSGGOG00000022363	SOX6 (ENSGGOG00000010884)
Orangutan	MODERN SPECIES	2	ENSPPYG00000002907	UEVLD (ENSPPYG00000003433)	TSG101 (ENSPPYG00000003434)	LDHAL6A (ENSPPYG00000003435)	LDHC (ENSPPYG00000003436)	LDHA (ENSPPYG00000003437)	GTF2H1 (ENSPPYG00000003438)	HPS5 (ENSPPYG00000003439)	ENSPPYG00000036972 ##21	SAA2 (ENSPPYG00000003440) ##21	SAA4 (ENSPPYG00000031722) ##21	MRGPRX4 (ENSPPYG00000039348)	ENSPPYG00000003442	MRGPRX3 (ENSPPYG00000038501)	SAAL1 (ENSPPYG00000039447) #21	TPH1 (ENSPPYG00000003445) #22	SERGEF (ENSPPYG00000003446) #23	KCNC1 (ENSPPYG00000003448) #24	MYOD1 (ENSPPYG00000003449) #25	OTOG (ENSPPYG00000003450) #26	USH1C (ENSPPYG00000003451) #27	ABCC8 (ENSPPYG00000004122) #28	KCNJ11 (ENSPPYG00000003452) #29	NCR3LG1 (ENSPPYG00000003453) #30	NUCB2 (ENSPPYG00000003454) #31	PIK3C2A (ENSPPYG00000003455) #33	ENSPPYG00000036022	PLEKHA7 (ENSPPYG00000003457) #35	C11H11orf58 (ENSPPYG00000003458) #36	SOX6 (ENSPPYG00000003459)	INSC (ENSPPYG00000003460)
Gibbon	MODERN SPECIES	5	TMEM86A (ENSNLEG00000017787)	ENSNLEG00000030606	SPTY2D1 (ENSNLEG00000017786)	ENSNLEG00000030850	UEVLD (ENSNLEG00000017785)	TSG101 (ENSNLEG00000017783)	LDHAL6A (ENSNLEG00000017780)	LDHC (ENSNLEG00000028060)	LDHA (ENSNLEG00000030432)	GTF2H1 (ENSNLEG00000017760)	HPS5 (ENSNLEG00000017752)	ENSNLEG00000017749 ##21	ENSNLEG00000028928 ##21	ENSNLEG00000017750 ##21	SAAL1 (ENSNLEG00000017747) #21	TPH1 (ENSNLEG00000017744) #22	SERGEF (ENSNLEG00000017742) #23	KCNC1 (ENSNLEG00000017741) #24	OTOG (ENSNLEG00000017737) #26	USH1C (ENSNLEG00000017735) #27	ENSNLEG00000034870	ABCC8 (ENSNLEG00000017729) #28	KCNJ11 (ENSNLEG00000036200) #29	NCR3LG1 (ENSNLEG00000034781) #30	NUCB2 (ENSNLEG00000017726) #31	ENSNLEG00000035283	PIK3C2A (ENSNLEG00000017723) #33	RPS13 (ENSNLEG00000029985)	PLEKHA7 (ENSNLEG00000017721) #35	C11orf58 (ENSNLEG00000029419) #36	ENSNLEG00000031503
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Rhinopithecus	ANCESTRAL SPECIES	465														ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31
Black snub-nosed monkey	MODERN SPECIES	54												SAA4 (ENSRBIG00000043432) ##21	MRGPRX3 (ENSRBIG00000044341)	ENSRBIG00000041399 ##21	SAAL1 (ENSRBIG00000031243) #21	TPH1 (ENSRBIG00000008098) #22	SERGEF (ENSRBIG00000030422) #23	KCNC1 (ENSRBIG00000023874) #24	MYOD1 (ENSRBIG00000031582) #25	OTOG (ENSRBIG00000038420) #26	USH1C (ENSRBIG00000032711) #27	ABCC8 (ENSRBIG00000028087) #28	KCNJ11 (ENSRBIG00000017895) #29	NUCB2 (ENSRBIG00000026384) #31
Golden snub-nosed monkey	MODERN SPECIES	1485	ENSRROG00000029345	UEVLD (ENSRROG00000043503)	TSG101 (ENSRROG00000007381)	LDHAL6A (ENSRROG00000041316)	ENSRROG00000029002	LDHC (ENSRROG00000025865)	ENSRROG00000034244	GTF2H1 (ENSRROG00000044245)	HPS5 (ENSRROG00000045543)	ENSRROG00000032522 ##21	SAA4 (ENSRROG00000041678) ##21	ENSRROG00000030356	MRGPRX3 (ENSRROG00000022175)	ENSRROG00000042459 ##21	SAAL1 (ENSRROG00000035972) #21	TPH1 (ENSRROG00000040674) #22	SERGEF (ENSRROG00000044406) #23	KCNC1 (ENSRROG00000025905) #24	MYOD1 (ENSRROG00000038327) #25	OTOG (ENSRROG00000031218) #26	USH1C (ENSRROG00000043583) #27	ABCC8 (ENSRROG00000038913) #28	KCNJ11 (ENSRROG00000027035) #29	NUCB2 (ENSRROG00000041737) #31
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Vervet Monkey	MODERN SPECIES		SPTY2D1 (ENSCSAG00000005056)	UEVLD (ENSCSAG00000005052)	TSG101 (ENSCSAG00000005050)	LDHAL6A (ENSCSAG00000005046)	LDHC (ENSCSAG00000005043)	ENSCSAG00000005035	GTF2H1 (ENSCSAG00000005008)	HPS5 (ENSCSAG00000005000)	ENSCSAG00000004969 ##21	ENSCSAG00000004965 ##21	SAA4 (ENSCSAG00000004962) ##21	MRGPRX4 (ENSCSAG00000004961)	ENSCSAG00000004958	ENSCSAG00000019323	SAAL1 (ENSCSAG00000004954) #21	TPH1 (ENSCSAG00000004950) #22	SERGEF (ENSCSAG00000004946) #23	KCNC1 (ENSCSAG00000004936) #24	MYOD1 (ENSCSAG00000004934) #25	OTOG (ENSCSAG00000004909) #26	USH1C (ENSCSAG00000004871) #27	ABCC8 (ENSCSAG00000004854) #28	KCNJ11 (ENSCSAG00000019324) #29	NCR3LG1 (ENSCSAG00000004804) #30	NUCB2 (ENSCSAG00000004802) #31	PIK3C2A (ENSCSAG00000004784) #33	ENSCSAG00000004762	PLEKHA7 (ENSCSAG00000004758) #35	C11orf58 (ENSCSAG00000004755) #36	ENSCSAG00000019325	SOX6 (ENSCSAG00000004751)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.y ##21	ENSGT00390000004737.b.a.o.a.a.b.x ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Cercopithecinae_d	ANCESTRAL SPECIES	99	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.a	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.y ##21	ENSGT00390000004737.b.a.o.a.a.b.x ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Drill	MODERN SPECIES	1100						TSG101 (ENSMLEG00000036515)	LDHAL6A (ENSMLEG00000041786)	LDHC (ENSMLEG00000028242)	ENSMLEG00000003699	GTF2H1 (ENSMLEG00000042426)	HPS5 (ENSMLEG00000035748)	ENSMLEG00000028344 ##21	ENSMLEG00000028895 ##21	SAA4 (ENSMLEG00000032527) ##21	SAAL1 (ENSMLEG00000012869) #21	TPH1 (ENSMLEG00000032014) #22	SERGEF (ENSMLEG00000042345) #23	KCNC1 (ENSMLEG00000033839) #24	MYOD1 (ENSMLEG00000031495) #25	OTOG (ENSMLEG00000027393) #26	USH1C (ENSMLEG00000038490) #27	ABCC8 (ENSMLEG00000004767) #28	KCNJ11 (ENSMLEG00000005939) #29	NUCB2 (ENSMLEG00000032247) #31	PIK3C2A (ENSMLEG00000039652) #33	RPS13 (ENSMLEG00000035302)	PLEKHA7 (ENSMLEG00000038628) #35	C11orf58 (ENSMLEG00000006504) #36
Sooty mangabey	MODERN SPECIES	290	PTPN5 (ENSCATG00000015959)	IGSF22 (ENSCATG00000042436)	TMEM86A (ENSCATG00000029000)	SPTY2D1 (ENSCATG00000036164)	ENSCATG00000033511	UEVLD (ENSCATG00000038967)	TSG101 (ENSCATG00000009882)	LDHAL6A (ENSCATG00000032545)	ENSCATG00000039048	GTF2H1 (ENSCATG00000035696)	HPS5 (ENSCATG00000035219)	ENSCATG00000031928 ##21	ENSCATG00000043701 ##21	SAA4 (ENSCATG00000033584) ##21	SAAL1 (ENSCATG00000028077) #21	TPH1 (ENSCATG00000040162) #22	SERGEF (ENSCATG00000039738) #23	KCNC1 (ENSCATG00000031951) #24	MYOD1 (ENSCATG00000031639) #25	OTOG (ENSCATG00000036498) #26	USH1C (ENSCATG00000025153) #27	ABCC8 (ENSCATG00000031694) #28	KCNJ11 (ENSCATG00000022849) #29	ENSCATG00000029541 #30	NUCB2 (ENSCATG00000043820) #31	PIK3C2A (ENSCATG00000010874) #33	ENSCATG00000044705
Olive baboon	MODERN SPECIES	3	ENSPANG00000040640	UEVLD (ENSPANG00000007976)	ENSPANG00000044560	TSG101 (ENSPANG00000005375)	LDHAL6A (ENSPANG00000008347)	ENSPANG00000047131	LDHC (ENSPANG00000025849)	LDHA (ENSPANG00000019081)	GTF2H1 (ENSPANG00000002504)	HPS5 (ENSPANG00000000205)	ENSPANG00000025709 ##21	SAA4 (ENSPANG00000012057) ##21	ENSPANG00000040114	ENSPANG00000044809	SAAL1 (ENSPANG00000006539) #21	TPH1 (ENSPANG00000007046) #22	SERGEF (ENSPANG00000025793) #23	KCNC1 (ENSPANG00000015328) #24	MYOD1 (ENSPANG00000011946) #25	ENSPANG00000045614	OTOG (ENSPANG00000010378) #26	USH1C (ENSPANG00000020256) #27	ABCC8 (ENSPANG00000007182) #28	KCNJ11 (ENSPANG00000016190) #29	NUCB2 (ENSPANG00000002503) #31	PIK3C2A (ENSPANG00000015538) #33	ENSPANG00000033142	PLEKHA7 (ENSPANG00000018146) #35	C11orf58 (ENSPANG00000004515) #36	ENSPANG00000044173 ##37	ENSPANG00000013057
Macaca	ANCESTRAL SPECIES	2	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.a	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.v ##21	ENSGT00390000004737.b.a.o.a.a.b.w ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000153272.a.b.o.b.a	ENSGT00940000156433.B
Pig-tailed macaque	MODERN SPECIES	131	SPTY2D1 (ENSMNEG00000038544)	ENSMNEG00000044112	UEVLD (ENSMNEG00000034421)	TSG101 (ENSMNEG00000041853)	LDHAL6A (ENSMNEG00000041126)	ENSMNEG00000024949	LDHC (ENSMNEG00000033782)	ENSMNEG00000042413	GTF2H1 (ENSMNEG00000036878)	ENSMNEG00000042089 ##21	HPS5 (ENSMNEG00000030883)	SAA2 (ENSMNEG00000041389) ##21	SAA4 (ENSMNEG00000043404) ##21	ENSMNEG00000035570	SAAL1 (ENSMNEG00000021954) #21	TPH1 (ENSMNEG00000028667) #22	SERGEF (ENSMNEG00000043939) #23	KCNC1 (ENSMNEG00000029034) #24	MYOD1 (ENSMNEG00000044032) #25	OTOG (ENSMNEG00000040832) #26	USH1C (ENSMNEG00000012077) #27	ABCC8 (ENSMNEG00000018051) #28	KCNJ11 (ENSMNEG00000023626) #29	NCR3LG1 (ENSMNEG00000000053) #30	NUCB2 (ENSMNEG00000036376) #31	PIK3C2A (ENSMNEG00000031943) #33	ENSMNEG00000043614	PLEKHA7 (ENSMNEG00000042391) #35	C11orf58 (ENSMNEG00000039475) #36	ENSMNEG00000020819	SOX6 (ENSMNEG00000015482)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00970000193605	ENSGT01100000263539.a.a.b.a.a.a.a.a.a	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000164064	ENSGT00940000161479	ENSGT00940000153201.j.k.a.a.b.a.a.a.b.b	ENSGT00390000015066.c	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b.v ##21	ENSGT00390000004737.b.a.o.a.a.b.w ##21	ENSGT00390000004737.b.a.o.a.b.d ##21	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.s.a.a.a	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00960000191653	ENSGT00980000199842.D.c.b
Rhesus	MODERN SPECIES	5	ENSMMUG00000064700	UEVLD (ENSMMUG00000000336)	TSG101 (ENSMMUG00000014613)	LDHAL6A (ENSMMUG00000014614)	LDHC (ENSMMUG00000014615)	LDHA (ENSMMUG00000031024)	GTF2H1 (ENSMMUG00000017959)	HPS5 (ENSMMUG00000017958)	ENSMMUG00000060306 ##21	ENSMMUG00000011177 ##21	SAA4 (ENSMMUG00000017960) ##21	MRGPRX4 (ENSMMUG00000055303)	ENSMMUG00000054997	MRGPRX3 (ENSMMUG00000060779)	SAAL1 (ENSMMUG00000014377) #21	TPH1 (ENSMMUG00000006096) #22	SERGEF (ENSMMUG00000006405) #23	KCNC1 (ENSMMUG00000006403) #24	MYOD1 (ENSMMUG00000006400) #25	OTOG (ENSMMUG00000023586) #26	USH1C (ENSMMUG00000023582) #27	ABCC8 (ENSMMUG00000023581) #28	NUCB2 (ENSMMUG00000005895) #31	PIK3C2A (ENSMMUG00000022548) #33	RPS13 (ENSMMUG00000022547)	PLEKHA7 (ENSMMUG00000017628) #35	ENSMMUG00000060216	C14H11orf58 (ENSMMUG00000017626) #36	ENSMMUG00000064582	ENSMMUG00000055212	SOX6 (ENSMMUG00000002753)
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000000553	TSG101 (ENSMFAG00000032321)	ENSMFAG00000058819	LDHAL6A (ENSMFAG00000050157)	LDHC (ENSMFAG00000003940)	ENSMFAG00000027126	ENSMFAG00000054002	GTF2H1 (ENSMFAG00000032995)	HPS5 (ENSMFAG00000044104)	ENSMFAG00000025977 ##21	SAA2 (ENSMFAG00000044536) ##21	SAA4 (ENSMFAG00000038106) ##21	MRGPRX4 (ENSMFAG00000056317)	MRGPRX3 (ENSMFAG00000052090)	SAAL1 (ENSMFAG00000037334) #21	ENSMFAG00000065213 #22	SERGEF (ENSMFAG00000000777) #23	KCNC1 (ENSMFAG00000002367) #24	MYOD1 (ENSMFAG00000039430) #25	OTOG (ENSMFAG00000001197) #26	USH1C (ENSMFAG00000000184) #27	ABCC8 (ENSMFAG00000035952) #28	KCNJ11 (ENSMFAG00000010384) #29	NCR3LG1 (ENSMFAG00000043862) #30	NUCB2 (ENSMFAG00000038074) #31	PIK3C2A (ENSMFAG00000033659) #33	ENSMFAG00000032124	PLEKHA7 (ENSMFAG00000000110) #35	C11orf58 (ENSMFAG00000041653) #36	ENSMFAG00000047457	ENSMFAG00000059859
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Tree shrew	MODERN SPECIES	5397													ENSTBEG00000001652 ##21	SAAL1 (ENSTBEG00000009600) #21	ENSTBEG00000009582	TPH1 (ENSTBEG00000009527) #22	SERGEF (ENSTBEG00000009078) #23
Glires	ANCESTRAL SPECIES	1	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.a ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Pika	MODERN SPECIES	975												ENSOPRG00000002549 ##21	ENSOPRG00000002539 ##21	ENSOPRG00000002525 ##21	SAAL1 (ENSOPRG00000002493) #21	TPH1 (ENSOPRG00000002467) #22	SERGEF (ENSOPRG00000002434) #23	MYOD1 (ENSOPRG00000002390) #25
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.f.a.a.a	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.f.a.a.a.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Marmotini	ANCESTRAL SPECIES	22	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01040000242859	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.f.a.a.a.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Marmotini_b	ANCESTRAL SPECIES	61	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01040000242859	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.f.a.a.a.a	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267
Squirrel	MODERN SPECIES	128	TMEM86A (ENSSTOG00000001110)	SPTY2D1 (ENSSTOG00000009291)	ENSSTOG00000032201	ENSSTOG00000032227	UEVLD (ENSSTOG00000009271)	TSG101 (ENSSTOG00000024403)	LDHC (ENSSTOG00000032003)	ENSSTOG00000000014	ENSSTOG00000033703	GTF2H1 (ENSSTOG00000000013)	HPS5 (ENSSTOG00000000011)	ENSSTOG00000000012 ##21	ENSSTOG00000022064 ##21	SAAL1 (ENSSTOG00000003419) #21	ENSSTOG00000031021	TPH1 (ENSSTOG00000003404) #22	SERGEF (ENSSTOG00000003395) #23	KCNC1 (ENSSTOG00000019519) #24	MYOD1 (ENSSTOG00000011556) #25	OTOG (ENSSTOG00000025595) #26	USH1C (ENSSTOG00000001933) #27	ABCC8 (ENSSTOG00000001904) #28	KCNJ11 (ENSSTOG00000025616) #29	NUCB2 (ENSSTOG00000001896) #31	ENSSTOG00000031872	PIK3C2A (ENSSTOG00000009188) #33	ENSSTOG00000031973	ENSSTOG00000008996	PLEKHA7 (ENSSTOG00000001423) #35	C11orf58 (ENSSTOG00000001419) #36	SOX6 (ENSSTOG00000013609)
Arctic ground squirrel	MODERN SPECIES	206												SAA4 (ENSUPAG00010007690) ##21	ENSUPAG00010007687 ##21	SAAL1 (ENSUPAG00010007663) #21	ENSUPAG00010007658	TPH1 (ENSUPAG00010007637) #22	SERGEF (ENSUPAG00010007606) #23	KCNC1 (ENSUPAG00010007591) #24	MYOD1 (ENSUPAG00010007585) #25	OTOG (ENSUPAG00010007511) #26	USH1C (ENSUPAG00010006868) #27	ABCC8 (ENSUPAG00010006784) #28	KCNJ11 (ENSUPAG00010006778) #29	NUCB2 (ENSUPAG00010006739) #31	ENSUPAG00010006717	PIK3C2A (ENSUPAG00010006674) #33	RPS13 (ENSUPAG00010006654)	PLEKHA7 (ENSUPAG00010006111) #35	C11orf58 (ENSUPAG00010006090) #36	SOX6 (ENSUPAG00010005850)	INSC (ENSUPAG00010005831)
Alpin marmot	MODERN SPECIES	3	PTPN5 (ENSMMMG00000005398)	TMEM86A (ENSMMMG00000005376)	SPTY2D1 (ENSMMMG00000005363)	ENSMMMG00000005356	ENSMMMG00000005344	UEVLD (ENSMMMG00000005312)	TSG101 (ENSMMMG00000005296)	ENSMMMG00000005255	ENSMMMG00000005208	GTF2H1 (ENSMMMG00000005016)	HPS5 (ENSMMMG00000004900)	SAA4 (ENSMMMG00000004885) ##21	ENSMMMG00000004876 ##21	SAAL1 (ENSMMMG00000004860) #21	ENSMMMG00000004842	TPH1 (ENSMMMG00000004814) #22	SERGEF (ENSMMMG00000004759) #23	ENSMMMG00000004750	KCNC1 (ENSMMMG00000004744) #24	MYOD1 (ENSMMMG00000004739) #25	ENSMMMG00000004715 #26	USH1C (ENSMMMG00000004314) #27	ABCC8 (ENSMMMG00000004227) #28	KCNJ11 (ENSMMMG00000004222) #29	NUCB2 (ENSMMMG00000004191) #31	ENSMMMG00000004174	ENSMMMG00000004134	PIK3C2A (ENSMMMG00000004019) #33	ENSMMMG00000003997	PLEKHA7 (ENSMMMG00000003770) #35	C11orf58 (ENSMMMG00000003760) #36
Eurasian red squirrel	MODERN SPECIES	2	TMEM86A (ENSSVLG00005014883)	SPTY2D1 (ENSSVLG00005014914)	ENSSVLG00005014961	UEVLD (ENSSVLG00005015052)	TSG101 (ENSSVLG00005015216)	LDHC (ENSSVLG00005015342)	ENSSVLG00005015754	GTF2H1 (ENSSVLG00005016086)	HPS5 (ENSSVLG00005004813)	ENSSVLG00005004846	ENSSVLG00005004866 ##21	ENSSVLG00005004896 ##21	SAA4 (ENSSVLG00005004914) ##21	ENSSVLG00005004937 ##21	SAAL1 (ENSSVLG00005004983) #21	TPH1 (ENSSVLG00005005094) #22	SERGEF (ENSSVLG00005005160) #23	KCNC1 (ENSSVLG00005005188) #24	MYOD1 (ENSSVLG00005005222) #25	OTOG (ENSSVLG00005005330) #26	USH1C (ENSSVLG00005005925) #27	ABCC8 (ENSSVLG00005006593) #28	KCNJ11 (ENSSVLG00005007700) #29	NUCB2 (ENSSVLG00005007770) #31	ENSSVLG00005007915	PIK3C2A (ENSSVLG00005007973) #33	ENSSVLG00005008146	PLEKHA7 (ENSSVLG00005008253) #35	ENSSVLG00005008507 #36	SOX6 (ENSSVLG00005008583)	INSC (ENSSVLG00005008947)
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000248165	ENSGT00940000164956	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.f.a.a.b.b.a	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687.g #36	ENSGT00940000156433.B	ENSGT00390000001511
Hystricomorpha_a	ANCESTRAL SPECIES	47	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000248165	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.f.a.a.b.b.a.a	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687.g #36	ENSGT00940000156433.B	ENSGT00390000001511	ENSGT00940000156267.o
Guinea pig	MODERN SPECIES	67	EFTUD2 (ENSCPOG00000010566)	CCDC103 (ENSCPOG00000013479)	GFAP (ENSCPOG00000020899)	C1QL1 (ENSCPOG00000023818)	DCAKD (ENSCPOG00000040615)	NMT1 (ENSCPOG00000000854)	PLCD3 (ENSCPOG00000007126)	ACBD4 (ENSCPOG00000034610)	HEXIM1 (ENSCPOG00000007132)	FMNL1 (ENSCPOG00000024625)	MAP3K14 (ENSCPOG00000004839)	ARHGAP27 (ENSCPOG00000033813)	PLEKHM1 (ENSCPOG00000011348)	ENSCPOG00000037249 ##21	SAAL1 (ENSCPOG00000006107) #21	TPH1 (ENSCPOG00000000911) #22	SERGEF (ENSCPOG00000000907) #23	KCNC1 (ENSCPOG00000011387) #24	MYOD1 (ENSCPOG00000021351) #25	OTOG (ENSCPOG00000002809) #26	USH1C (ENSCPOG00000001261) #27	ABCC8 (ENSCPOG00000001255) #28	KCNJ11 (ENSCPOG00000004142) #29	NUCB2 (ENSCPOG00000023342) #31	PIK3C2A (ENSCPOG00000000024) #33	RPS13 (ENSCPOG00000000023)	PLEKHA7 (ENSCPOG00000006974) #35	C11orf58 (ENSCPOG00000038571) #36	SOX6 (ENSCPOG00000012090)	INSC (ENSCPOG00000009748)	ENSCPOG00000034508
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01090000262692	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687.g #36	ENSGT00940000171813	ENSGT00940000156433.B	ENSGT00390000001511
Long-tailed chinchilla	MODERN SPECIES	121	ENSCLAG00000017279	PTPN5 (ENSCLAG00000016396)	TMEM86A (ENSCLAG00000017173)	SPTY2D1 (ENSCLAG00000017224)	ENSCLAG00000017004	ENSCLAG00000017270	UEVLD (ENSCLAG00000017090)	TSG101 (ENSCLAG00000017169)	LDHC (ENSCLAG00000017086)	ENSCLAG00000017061	GTF2H1 (ENSCLAG00000016966)	HPS5 (ENSCLAG00000017249)	SAA4 (ENSCLAG00000016977) ##21	ENSCLAG00000016741 ##21	SAAL1 (ENSCLAG00000017121) #21	TPH1 (ENSCLAG00000017233) #22	SERGEF (ENSCLAG00000016819) #23	KCNC1 (ENSCLAG00000017208) #24	MYOD1 (ENSCLAG00000016988) #25	OTOG (ENSCLAG00000017199) #26	USH1C (ENSCLAG00000017070) #27	ABCC8 (ENSCLAG00000017273) #28	KCNJ11 (ENSCLAG00000018089) #29	NUCB2 (ENSCLAG00000015316) #31	PIK3C2A (ENSCLAG00000016983) #33	ENSCLAG00000017194	PLEKHA7 (ENSCLAG00000017010) #35	C11orf58 (ENSCLAG00000016801) #36	ENSCLAG00000016704	SOX6 (ENSCLAG00000016824)	INSC (ENSCLAG00000017184)
Degu	MODERN SPECIES	108	ENSODEG00000009912	SPTY2D1 (ENSODEG00000011157)	ENSODEG00000010073	ENSODEG00000009385	TSG101 (ENSODEG00000011046)	ENSODEG00000010760	ENSODEG00000010324	ENSODEG00000009666	ENSODEG00000019665	ENSODEG00000010218	ENSODEG00000009884	ENSODEG00000009628 ##21	ENSODEG00000009541	ENSODEG00000009128 ##21	SAAL1 (ENSODEG00000013515) #21	TPH1 (ENSODEG00000009357) #22	KCNC1 (ENSODEG00000009078) #24	MYOD1 (ENSODEG00000009827) #25	OTOG (ENSODEG00000012735) #26	USH1C (ENSODEG00000009175) #27	ABCC8 (ENSODEG00000009121) #28	KCNJ11 (ENSODEG00000019745) #29	ENSODEG00000009435	ENSODEG00000008817	NUCB2 (ENSODEG00000009138) #31	PIK3C2A (ENSODEG00000009662) #33	ENSODEG00000009296	PLEKHA7 (ENSODEG00000010004) #35	ENSODEG00000009867	SOX6 (ENSODEG00000008432)	INSC (ENSODEG00000008548)
Naked mole-rat female	MODERN SPECIES	24	TMEM86A (ENSHGLG00000048247)	ENSHGLG00000046693	ENSHGLG00000008282	ENSHGLG00000035318	ENSHGLG00000048762	ENSHGLG00000046195	UEVLD (ENSHGLG00000008452)	TSG101 (ENSHGLG00000013227)	LDHC (ENSHGLG00000015435)	ENSHGLG00000015168	ENSHGLG00000015129	HPS5 (ENSHGLG00000010391)	SAA4 (ENSHGLG00000042878) ##21	ENSHGLG00000039519 ##21	SAAL1 (ENSHGLG00000007181) #21	TPH1 (ENSHGLG00000033079) #22	SERGEF (ENSHGLG00000005775) #23	KCNC1 (ENSHGLG00000005420) #24	MYOD1 (ENSHGLG00000004984) #25	ENSHGLG00000006891 #26	USH1C (ENSHGLG00000010904) #27	ABCC8 (ENSHGLG00000008993) #28	KCNJ11 (ENSHGLG00000037268) #29	ENSHGLG00000036103 #30	ENSHGLG00000004738 #31	ENSHGLG00000037844	PIK3C2A (ENSHGLG00000007454) #33	ENSHGLG00000005727	PLEKHA7 (ENSHGLG00000004474) #35	ENSHGLG00000010951 #36	SOX6 (ENSHGLG00000013237)
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.p ##21	ENSGT00390000004737.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Myomorpha	ANCESTRAL SPECIES	13	ENSGT01040000242986	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.p ##21	ENSGT00390000004737.a ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Muroidea	ANCESTRAL SPECIES	65	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01040000242986	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01040000242986	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000170775	ENSGT00940000155818	ENSGT00390000004737.a ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.c #30	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a
Cricetidae	ANCESTRAL SPECIES	28												ENSGT00390000004737.a ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.c #30	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a
Cricetinae	ANCESTRAL SPECIES	33														ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.c #30	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a
Golden Hamster	MODERN SPECIES	792														Saa3 (ENSMAUG00000001692) ##21	Saal1 (ENSMAUG00000003480) #21	Tph1 (ENSMAUG00000002337) #22	Sergef (ENSMAUG00000010081) #23	Kcnc1 (ENSMAUG00000020682) #24	Myod1 (ENSMAUG00000013881) #25	ENSMAUG00000018031 #26	Ush1c (ENSMAUG00000000973) #27	Abcc8 (ENSMAUG00000007029) #28	Kcnj11 (ENSMAUG00000006751) #29	Nomo1 (ENSMAUG00000014334)	Abcc6 (ENSMAUG00000011133)	ENSMAUG00000019813	ENSMAUG00000017711	Emp3 (ENSMAUG00000011967)	Tmem143 (ENSMAUG00000021611)	Syngr4 (ENSMAUG00000019444)	Kdelr1 (ENSMAUG00000017897)
Chinese hamster chok1gshd	MODERN SPECIES	271														Saa3 (ENSCGRG00001011262) ##21	ENSCGRG00001013232 #21	Tph1 (ENSCGRG00001020143) #22	ENSCGRG00001023881 #23	Kcnc1 (ENSCGRG00001000468) #24	Myod1 (ENSCGRG00001012742) #25	Otog (ENSCGRG00001017020) #26	Ush1c (ENSCGRG00001019889) #27	Abcc8 (ENSCGRG00001019046) #28	Kcnj11 (ENSCGRG00001016383) #29	ENSCGRG00001007718 #30	Nomo1 (ENSCGRG00001022926)	Abcc6 (ENSCGRG00001019363)	ENSCGRG00001015977	Emp3 (ENSCGRG00001019827)	Tmem143 (ENSCGRG00001004118)	ENSCGRG00001016333	Syngr4 (ENSCGRG00001019310)
Cricetidae_B	ANCESTRAL SPECIES	31												ENSGT00390000004737.a ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.c #30	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a
Prairie vole	MODERN SPECIES	97	Kcnj14 (ENSMOCG00000010655)	ENSMOCG00000005367	Grin2d (ENSMOCG00000019653)	Kdelr1 (ENSMOCG00000000652)	Syngr4 (ENSMOCG00000020597)	Tmem143 (ENSMOCG00000012780)	Emp3 (ENSMOCG00000006718)	ENSMOCG00000010788	Abcc6 (ENSMOCG00000016244)	ENSMOCG00000012779	ENSMOCG00000021805 ##21	Saa4 (ENSMOCG00000003806) ##21	Saa3 (ENSMOCG00000022825) ##21	ENSMOCG00000012708	Saal1 (ENSMOCG00000019240) #21	Tph1 (ENSMOCG00000022944) #22	Kcnc1 (ENSMOCG00000020898) #24	ENSMOCG00000002983 #25	Otog (ENSMOCG00000020280) #26	Ush1c (ENSMOCG00000015362) #27	Abcc8 (ENSMOCG00000013816) #28	Kcnj11 (ENSMOCG00000007862) #29
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000010926	Htatip2 (ENSPEMG00000009365)	Prmt3 (ENSPEMG00000008087)	Slc6a5 (ENSPEMG00000020942)	Nell1 (ENSPEMG00000009575)	Ano5 (ENSPEMG00000011022)	Slc17a6 (ENSPEMG00000012568)	Fancf (ENSPEMG00000026089)	Gas2 (ENSPEMG00000006543)	Svip (ENSPEMG00000017315)	ENSPEMG00000012474	ENSPEMG00000028115 ##21	ENSPEMG00000019341	ENSPEMG00000026619 ##21	Saal1 (ENSPEMG00000003170) #21	Tph1 (ENSPEMG00000011560) #22	Sergef (ENSPEMG00000008220) #23	Kcnc1 (ENSPEMG00000014098) #24	Myod1 (ENSPEMG00000017570) #25	Otog (ENSPEMG00000011623) #26	Ush1c (ENSPEMG00000016758) #27	Abcc8 (ENSPEMG00000003061) #28	Kcnj11 (ENSPEMG00000006566) #29	ENSPEMG00000028367 #30	Nomo1 (ENSPEMG00000016802)	Abcc6 (ENSPEMG00000016077)	ENSPEMG00000031392 ##21	ENSPEMG00000031055 ##21	ENSPEMG00000030125	ENSPEMG00000024292	ENSPEMG00000014876
Murinae	ANCESTRAL SPECIES		ENSGT01030000234639.A.b.a.b.a.b.a.a.a	ENSGT01030000234639.A.b.a.b.a.b.a.b	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.c #30	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a
Mus	ANCESTRAL SPECIES		ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.d	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.p ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a	ENSGT00940000159109
Mus_A	ANCESTRAL SPECIES	1	ENSGT01030000234639.A.b.a.b.a.b.a.b	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e.f.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.p.c ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a	ENSGT00940000159109
Mus_B	ANCESTRAL SPECIES		ENSGT01030000234639.A.b.a.b.a.b.a.b.c.a.b.a	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e.f.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.p.c ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000183364	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a
Mouse	MODERN SPECIES	16	Ptpn5 (ENSMUSG00000030854)	Tmem86a (ENSMUSG00000010307)	Spty2d1 (ENSMUSG00000049516)	Misfa (ENSMUSG00000056509)	Uevld (ENSMUSG00000043262)	Tsg101 (ENSMUSG00000014402)	Ldhc (ENSMUSG00000030851)	Ldha (ENSMUSG00000063229)	Gtf2h1 (ENSMUSG00000006599)	Hps5 (ENSMUSG00000014418)	Saa2 (ENSMUSG00000057465) ##21	Saa1 (ENSMUSG00000074115) ##21	Saa4 (ENSMUSG00000040017) ##21	Saa3 (ENSMUSG00000040026) ##21	Saal1 (ENSMUSG00000006763) #21	Tph1 (ENSMUSG00000040046) #22	Sergef (ENSMUSG00000030839) #23	Kcnc1 (ENSMUSG00000058975) #24	Myod1 (ENSMUSG00000009471) #25	Otog (ENSMUSG00000009487) #26	Ush1c (ENSMUSG00000030838) #27	Abcc8 (ENSMUSG00000040136) #28	Kcnj11 (ENSMUSG00000096146) #29	Nomo1 (ENSMUSG00000030835)	Abcc6 (ENSMUSG00000030834)	Odad1 (ENSMUSG00000040189)	Emp3 (ENSMUSG00000040212)	Tmem143 (ENSMUSG00000002781)	Syngr4 (ENSMUSG00000040231)	Kdelr1 (ENSMUSG00000002778)	Grin2d (ENSMUSG00000002771)
Mus_C	ANCESTRAL SPECIES	13	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000246954	ENSGT00970000193605	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000161479	ENSGT00940000153201.j.l.e.f.a.a.b	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.p.c ##21	ENSGT00390000004737.b.a.o.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000000089	ENSGT00940000157145	ENSGT00940000153116.A	ENSGT00950000182696.B.b	ENSGT00940000154315.a	ENSGT00950000182935.A	ENSGT00390000004010.a.a	ENSGT00940000159109
spretus	MODERN SPECIES	16	Ptpn5 (MGP_SPRETEiJ_G0030876)	Tmem86a (MGP_SPRETEiJ_G0030875)	Spty2d1 (MGP_SPRETEiJ_G0030874)	MGP_SPRETEiJ_G0030873	Uevld (MGP_SPRETEiJ_G0030872)	MGP_SPRETEiJ_G0030871	Ldhc (MGP_SPRETEiJ_G0030870)	Ldha (MGP_SPRETEiJ_G0030869)	Gtf2h1 (MGP_SPRETEiJ_G0030868)	Hps5 (MGP_SPRETEiJ_G0030867)	MGP_SPRETEiJ_G0030866 ##21	MGP_SPRETEiJ_G0030865 ##21	Saa4 (MGP_SPRETEiJ_G0030864) ##21	Saa3 (MGP_SPRETEiJ_G0030863) ##21	Saal1 (MGP_SPRETEiJ_G0030862) #21	Tph1 (MGP_SPRETEiJ_G0030861) #22	Sergef (MGP_SPRETEiJ_G0030860) #23	Kcnc1 (MGP_SPRETEiJ_G0030859) #24	Myod1 (MGP_SPRETEiJ_G0030858) #25	Otog (MGP_SPRETEiJ_G0030857) #26	Ush1c (MGP_SPRETEiJ_G0030856) #27	Abcc8 (MGP_SPRETEiJ_G0030855) #28	Kcnj11 (MGP_SPRETEiJ_G0030854) #29	Nomo1 (MGP_SPRETEiJ_G0030853)	Abcc6 (MGP_SPRETEiJ_G0030852)	MGP_SPRETEiJ_G0030851	Emp3 (MGP_SPRETEiJ_G0030850)	Tmem143 (MGP_SPRETEiJ_G0030849)	Syngr4 (MGP_SPRETEiJ_G0030848)	Kdelr1 (MGP_SPRETEiJ_G0030847)	Grin2d (MGP_SPRETEiJ_G0030846)
Steppe mouse	MODERN SPECIES	3390													Saa4 (ENSMSIG00000027736) ##21	Saa3 (ENSMSIG00000027731) ##21	Saal1 (ENSMSIG00000027716) #21	Tph1 (ENSMSIG00000027705) #22	Sergef (ENSMSIG00000027666) #23	Kcnc1 (ENSMSIG00000027653) #24	Myod1 (ENSMSIG00000027645) #25	Otog (ENSMSIG00000027559) #26	Ush1c (ENSMSIG00000026733) #27	Abcc8 (ENSMSIG00000026529) #28	Kcnj11 (ENSMSIG00000026521) #29	Nomo1 (ENSMSIG00000026440)	Abcc6 (ENSMSIG00000026407)	Odad1 (ENSMSIG00000026391)	Emp3 (ENSMSIG00000026370)	Tmem143 (ENSMSIG00000026331)	Syngr4 (ENSMSIG00000026311)	ENSMSIG00000026284
Ryukyu mouse	MODERN SPECIES	16	Ptpn5 (MGP_CAROLIEiJ_G0029778)	Tmem86a (MGP_CAROLIEiJ_G0029777)	Spty2d1 (MGP_CAROLIEiJ_G0029776)	MGP_CAROLIEiJ_G0029775	Uevld (MGP_CAROLIEiJ_G0029774)	Tsg101 (MGP_CAROLIEiJ_G0029773)	MGP_CAROLIEiJ_G0029772	Ldha (MGP_CAROLIEiJ_G0029771)	Gtf2h1 (MGP_CAROLIEiJ_G0029770)	Hps5 (MGP_CAROLIEiJ_G0029769)	MGP_CAROLIEiJ_G0029768 ##21	MGP_CAROLIEiJ_G0029767 ##21	Saa4 (MGP_CAROLIEiJ_G0029766) ##21	Saa3 (MGP_CAROLIEiJ_G0029765) ##21	Saal1 (MGP_CAROLIEiJ_G0029764) #21	Tph1 (MGP_CAROLIEiJ_G0029763) #22	Sergef (MGP_CAROLIEiJ_G0029762) #23	Kcnc1 (MGP_CAROLIEiJ_G0029761) #24	Myod1 (MGP_CAROLIEiJ_G0029760) #25	Otog (MGP_CAROLIEiJ_G0029759) #26	Ush1c (MGP_CAROLIEiJ_G0029758) #27	Abcc8 (MGP_CAROLIEiJ_G0029757) #28	Kcnj11 (MGP_CAROLIEiJ_G0029756) #29	Nomo1 (MGP_CAROLIEiJ_G0029755)	Abcc6 (MGP_CAROLIEiJ_G0029754)	MGP_CAROLIEiJ_G0029753	Emp3 (MGP_CAROLIEiJ_G0029752)	Tmem143 (MGP_CAROLIEiJ_G0029751)	Syngr4 (MGP_CAROLIEiJ_G0029750)	Kdelr1 (MGP_CAROLIEiJ_G0029749)	Grin2d (MGP_CAROLIEiJ_G0029748)
Shrew mouse	MODERN SPECIES		Ptpn5 (MGP_PahariEiJ_G0013003)	Tmem86a (MGP_PahariEiJ_G0013002)	Spty2d1 (MGP_PahariEiJ_G0013001)	MGP_PahariEiJ_G0013000	Uevld (MGP_PahariEiJ_G0012999)	Tsg101 (MGP_PahariEiJ_G0012998)	Ldhc (MGP_PahariEiJ_G0012997)	MGP_PahariEiJ_G0012996	Gtf2h1 (MGP_PahariEiJ_G0012995)	Hps5 (MGP_PahariEiJ_G0012994)	MGP_PahariEiJ_G0012993 ##21	MGP_PahariEiJ_G0012992 ##21	Saa4 (MGP_PahariEiJ_G0012991) ##21	Saa3 (MGP_PahariEiJ_G0012990) ##21	Saal1 (MGP_PahariEiJ_G0012989) #21	Tph1 (MGP_PahariEiJ_G0012988) #22	MGP_PahariEiJ_G0012987 #23	Kcnc1 (MGP_PahariEiJ_G0012986) #24	Myod1 (MGP_PahariEiJ_G0012985) #25	Otog (MGP_PahariEiJ_G0012984) #26	Ush1c (MGP_PahariEiJ_G0012983) #27	Abcc8 (MGP_PahariEiJ_G0012982) #28	Kcnj11 (MGP_PahariEiJ_G0012981) #29	Nomo1 (MGP_PahariEiJ_G0012980)	Abcc6 (MGP_PahariEiJ_G0012979)	MGP_PahariEiJ_G0012978	Emp3 (MGP_PahariEiJ_G0012977)	Tmem143 (MGP_PahariEiJ_G0012976)	Syngr4 (MGP_PahariEiJ_G0012975)	Kdelr1 (MGP_PahariEiJ_G0012974)	Grin2d (MGP_PahariEiJ_G0012973)
Rat	MODERN SPECIES		Mrgprb4 (ENSRNOG00000033021)	Mrgprx1 (ENSRNOG00000014242)	Mrgprx3 (ENSRNOG00000014227)	Ptpn5 (ENSRNOG00000013981)	Tmem86a (ENSRNOG00000013663)	AABR07003273.1 (ENSRNOG00000050257)	Spty2d1 (ENSRNOG00000070392)	LOC100911574 (ENSRNOG00000066101)	Uevld (ENSRNOG00000013624)	Tsg101 (ENSRNOG00000013381)	Ldhc (ENSRNOG00000013103)	Ldha (ENSRNOG00000013009)	Gtf2h1 (ENSRNOG00000012360)	Saa4 (ENSRNOG00000055531)	Saal1 (ENSRNOG00000011895) ##21	Tph1 (ENSRNOG00000011672) #22	Sergef (ENSRNOG00000011488) #23	Kcnc1 (ENSRNOG00000055401) #24	Myod1 (ENSRNOG00000011306) #25	Otog (ENSRNOG00000010983) #26	Ush1c (ENSRNOG00000021149) #27	Abcc8 (ENSRNOG00000021130) #28	Kcnj11 (ENSRNOG00000021128) #29	Ncr3lg1 (ENSRNOG00000070704) #30	Nomo1 (ENSRNOG00000021118)	Abcc6 (ENSRNOG00000028781)	Odad1 (ENSRNOG00000021109)	Emp3 (ENSRNOG00000021104)	Tmem143 (ENSRNOG00000021096)	Syngr4 (ENSRNOG00000021093)	Kdelr1 (ENSRNOG00000021082)
Upper Galilee mountains blind mole rat	MODERN SPECIES	847															Saal1 (ENSNGAG00000014266) #21	Tph1 (ENSNGAG00000013495) #22	Sergef (ENSNGAG00000011505) #23	Kcnc1 (ENSNGAG00000010985) #24	Myod1 (ENSNGAG00000018134) #25	Otog (ENSNGAG00000018230) #26	Ush1c (ENSNGAG00000011687) #27	Abcc8 (ENSNGAG00000014435) #28	Kcnj11 (ENSNGAG00000006021) #29
Lesser Egyptian jerboa	MODERN SPECIES	43	ENSJJAG00000013317	Nav2 (ENSJJAG00000016851)	Dbx1 (ENSJJAG00000015647)	ENSJJAG00000020128	Htatip2 (ENSJJAG00000010030)	Prmt3 (ENSJJAG00000012757)	Slc6a5 (ENSJJAG00000015806)	Nell1 (ENSJJAG00000011975)	Ano5 (ENSJJAG00000015882)	Slc17a6 (ENSJJAG00000020770)	Gas2 (ENSJJAG00000015866)	Svip (ENSJJAG00000021446)	ENSJJAG00000018291	Luzp2 (ENSJJAG00000012698)	Saal1 (ENSJJAG00000019205) #21	Tph1 (ENSJJAG00000023739) #22	Sergef (ENSJJAG00000006549) #23	Kcnc1 (ENSJJAG00000020413) #24	Myod1 (ENSJJAG00000022220) #25	ENSJJAG00000020712 #26	Ush1c (ENSJJAG00000023737) #27	Abcc8 (ENSJJAG00000019120) #28	Kcnj11 (ENSJJAG00000011720) #29	Nucb2 (ENSJJAG00000016858) #31	Pik3c2a (ENSJJAG00000022972) #33	ENSJJAG00000001032	Rps13 (ENSJJAG00000014986)	Plekha7 (ENSJJAG00000015908) #35	ENSJJAG00000007100 #36	ENSJJAG00000018380	Sox6 (ENSJJAG00000019247)
Kangaroo rat	MODERN SPECIES	501													Hps5 (ENSDORG00000004137)	ENSDORG00000012937 ##21	Saal1 (ENSDORG00000013616) #21	ENSDORG00000013235 #22	Sergef (ENSDORG00000013234) #23	Kcnc1 (ENSDORG00000013230) #24	Myod1 (ENSDORG00000027063) #25	Otog (ENSDORG00000009610) #26	Ush1c (ENSDORG00000009605) #27	Abcc8 (ENSDORG00000009602) #28	Nucb2 (ENSDORG00000009599) #31	Pik3c2a (ENSDORG00000002510) #33	Rps13 (ENSDORG00000002507)	Plekha7 (ENSDORG00000013868) #35	1110004F10Rik (ENSDORG00000029283) #36	Sox6 (ENSDORG00000013073)	Insc (ENSDORG00000015511)	Calcb (ENSDORG00000015509)	ENSDORG00000007871
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT01030000234639.A.b.a.b.a.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Xenarthra	ANCESTRAL SPECIES	474								ENSGT00940000164956	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23
Sloth	MODERN SPECIES	2309																TPH1 (ENSCHOG00000012569) #22
Armadillo	MODERN SPECIES	4729						ENSDNOG00000034564	UEVLD (ENSDNOG00000049358)	ENSDNOG00000043057	TSG101 (ENSDNOG00000004191)	ENSDNOG00000018915	GTF2H1 (ENSDNOG00000008931)	HPS5 (ENSDNOG00000008878)	ENSDNOG00000037533 ##21	ENSDNOG00000042098 ##21	SAAL1 (ENSDNOG00000046307) #21	TPH1 (ENSDNOG00000037660) #22	SERGEF (ENSDNOG00000001225) #23
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Tenrec	MODERN SPECIES	2575																TPH1 (ENSETEG00000008769) #22	SERGEF (ENSETEG00000008763) #23	ENSETEG00000008760	KCNC1 (ENSETEG00000008758) #24
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Hyrax	MODERN SPECIES	9000																TPH1 (ENSPCAG00000011122) #22
Elephant	DUPLICATION
Elephant	MODERN SPECIES	209	CSRP3 (ENSLAFG00000018473)	ZDHHC13 (ENSLAFG00000014788)	ENSLAFG00000010977	ENSLAFG00000032037	PTPN5 (ENSLAFG00000013689)	IGSF22 (ENSLAFG00000031965)	TMEM86A (ENSLAFG00000002024)	SPTY2D1 (ENSLAFG00000003686)	UEVLD (ENSLAFG00000020671)	TSG101 (ENSLAFG00000003682)	LDHAL6B (ENSLAFG00000003680)	ENSLAFG00000011307	GTF2H1 (ENSLAFG00000011296)	HPS5 (ENSLAFG00000011289)	ENSLAFG00000027166 ##21	ENSLAFG00000007862 #22	SERGEF (ENSLAFG00000018367) #23	KCNC1 (ENSLAFG00000018355) #24	MYOD1 (ENSLAFG00000018353) #25	OTOG (ENSLAFG00000004882) #26	USH1C (ENSLAFG00000022470) #27	ABCC8 (ENSLAFG00000007014) #28	KCNJ11 (ENSLAFG00000031878) #29	NUCB2 (ENSLAFG00000007349) #31	PIK3C2A (ENSLAFG00000003710) #33	RPS13 (ENSLAFG00000026881)	PLEKHA7 (ENSLAFG00000007609) #35	C11orf58 (ENSLAFG00000007606) #36	SOX6 (ENSLAFG00000002917)	INSC (ENSLAFG00000005686)	ENSLAFG00000015843
Elephant	MODERN SPECIES	515																ENSLAFG00000030056 #22
Marsupialia	ANCESTRAL SPECIES	7	ENSGT01090000260017.c.a.b	ENSGT01100000263499.a.c.b.c.b	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT00940000153201.j	ENSGT00390000015066.a	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000164956	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT01030000235549	ENSGT00940000153201.i.a	ENSGT00390000015066.a	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687.b #36	ENSGT00940000156433.B	ENSGT00390000001511
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164956	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000163242	ENSGT00940000161479	ENSGT01030000235549	ENSGT00940000153201.i.a	ENSGT00390000015066.a	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t	ENSGT00940000155817.a.a #35	ENSGT00390000000687.b #36	ENSGT00940000156433.B	ENSGT00390000001511
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164956	ENSGT01050000245084	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT01030000235549.a.a	ENSGT00940000161479	ENSGT01030000235549.a.b	ENSGT00940000153201.i.a.b	ENSGT00390000015066.a	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.f #30	ENSGT00940000163348.e.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491.t.w	ENSGT00940000155817.a.a #35	ENSGT00390000000687.b #36	ENSGT00940000156433.B
Common wonbat	MODERN SPECIES	608															SAAL1 (ENSVURG00010006512) #21	TPH1 (ENSVURG00010006498) #22	SERGEF (ENSVURG00010006477) #23	KCNC1 (ENSVURG00010006461) #24	MYOD1 (ENSVURG00010006453) #25	OTOG (ENSVURG00010006327) #26	USH1C (ENSVURG00010006258) #27	ABCC8 (ENSVURG00010006223) #28	KCNJ11 (ENSVURG00010006207) #29	ENSVURG00010006198 #30	ENSVURG00010006183 #30	NUCB2 (ENSVURG00010006037) #31	PIK3C2A (ENSVURG00010005972) #33	RPS13 (ENSVURG00010005940)	PLEKHA7 (ENSVURG00010005891) #35	C11orf58 (ENSVURG00010005869) #36	SOX6 (ENSVURG00010005847)
koala	MODERN SPECIES	108	ENSPCIG00000036670	PTPN5 (ENSPCIG00000014018)	TMEM86A (ENSPCIG00000014011)	SPTY2D1 (ENSPCIG00000014008)	ENSPCIG00000037419	MISFA (ENSPCIG00000014006)	UEVLD (ENSPCIG00000014004)	TSG101 (ENSPCIG00000013997)	ENSPCIG00000013992	LDHC (ENSPCIG00000013990)	ENSPCIG00000013770	GTF2H1 (ENSPCIG00000013760)	HPS5 (ENSPCIG00000013753)	ENSPCIG00000033997	SAAL1 (ENSPCIG00000013745) #21	TPH1 (ENSPCIG00000013741) #22	ENSPCIG00000013737 #23	KCNC1 (ENSPCIG00000013732) #24	MYOD1 (ENSPCIG00000018402) #25	USH1C (ENSPCIG00000013650) #27	ABCC8 (ENSPCIG00000013643) #28	ENSPCIG00000013127 #30	ENSPCIG00000035386 #30	NUCB2 (ENSPCIG00000013631) #31	PIK3C2A (ENSPCIG00000013619) #33	ENSPCIG00000013612	PLEKHA7 (ENSPCIG00000021403) #35	C11orf58 (ENSPCIG00000021388) #36	SOX6 (ENSPCIG00000021385)	INSC (ENSPCIG00000010520)	ENSPCIG00000010519
Wallaby	MODERN SPECIES	3501																ENSMEUG00000003994 #22
Tasmanian devil	MODERN SPECIES	5	ENSSHAG00000027551	ENSSHAG00000014824	IGSF22 (ENSSHAG00000014910)	TMEM86A (ENSSHAG00000022231)	ENSSHAG00000024232	SPTY2D1 (ENSSHAG00000015061)	ENSSHAG00000023698	ENSSHAG00000022059	TSG101 (ENSSHAG00000015267)	ENSSHAG00000029476	LDHC (ENSSHAG00000030723)	ENSSHAG00000025930	GTF2H1 (ENSSHAG00000015946)	HPS5 (ENSSHAG00000016026)	SAAL1 (ENSSHAG00000030904) #21	TPH1 (ENSSHAG00000016519) #22	ENSSHAG00000023659 #23	KCNC1 (ENSSHAG00000022035) #24	MYOD1 (ENSSHAG00000017220) #25	OTOG (ENSSHAG00000017355) #26	USH1C (ENSSHAG00000017497) #27	ABCC8 (ENSSHAG00000017597) #28	KCNJ11 (ENSSHAG00000022074) #29	ENSSHAG00000028371 #31	PIK3C2A (ENSSHAG00000001008) #33	RPS13 (ENSSHAG00000004052)	PLEKHA7 (ENSSHAG00000007139) #35	ENSSHAG00000008106 #36	SOX6 (ENSSHAG00000006502)	ENSSHAG00000028264	INSC (ENSSHAG00000014350)
Opossum	MODERN SPECIES	4	PTPN5 (ENSMODG00000006327)	IGSF22 (ENSMODG00000006354)	TMEM86A (ENSMODG00000006364)	ENSMODG00000006373	ENSMODG00000037593	ENSMODG00000049605	ENSMODG00000006389	ENSMODG00000006410	ENSMODG00000040672	ENSMODG00000006509	LDHA (ENSMODG00000006522)	ENSMODG00000006540	HPS5 (ENSMODG00000006574)	ENSMODG00000024617	SAAL1 (ENSMODG00000006679) #21	TPH1 (ENSMODG00000006704) #22	ENSMODG00000006721 #23	KCNC1 (ENSMODG00000006734) #24	MYOD1 (ENSMODG00000006749) #25	OTOG (ENSMODG00000006791) #26	USH1C (ENSMODG00000006841) #27	ABCC8 (ENSMODG00000006995) #28	KCNJ11 (ENSMODG00000007004) #29	NUCB2 (ENSMODG00000007015) #31	ENSMODG00000007062 #33	RPS13 (ENSMODG00000007078)	PLEKHA7 (ENSMODG00000007138) #35	C11orf58 (ENSMODG00000043387) #36	SOX6 (ENSMODG00000007224)	ENSMODG00000029280	ENSMODG00000024593
Platypus	MODERN SPECIES	14	NRXN2 (ENSOANG00000045579)	ENSOANG00000048677	ENSOANG00000039525	TMEM86A (ENSOANG00000049158)	SPTY2D1 (ENSOANG00000051208)	UEVLD (ENSOANG00000050347)	TSG101 (ENSOANG00000008368)	ENSOANG00000008367	LDHA (ENSOANG00000048733)	GTF2H1 (ENSOANG00000014982)	HPS5 (ENSOANG00000044228)	ENSOANG00000044149	ENSOANG00000000595 ##21	SAAL1 (ENSOANG00000000809) #21	ENSOANG00000000811 ##21	TPH1 (ENSOANG00000050270) #22	ENSOANG00000044323 #23	KCNC1 (ENSOANG00000003052) #24	ENSOANG00000047737 #25	OTOG (ENSOANG00000010676) #26	ENSOANG00000007679 #27	ABCC8 (ENSOANG00000007680) #28	ENSOANG00000045336	NUCB2 (ENSOANG00000007683) #31	PIK3C2A (ENSOANG00000007685) #33	RPS13 (ENSOANG00000007687)	PLEKHA7 (ENSOANG00000007688) #35	C11orf58 (ENSOANG00000036260) #36	ENSOANG00000050997	ENSOANG00000022345	ENSOANG00000001353 ##21
Sauria	ANCESTRAL SPECIES	3	ENSGT00950000185387	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00940000175801.b	ENSGT00390000017491	ENSGT00940000155817.a.a #35
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00950000185387	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Archosauria	ANCESTRAL SPECIES	5	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Aves	ANCESTRAL SPECIES	2	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Neognathae	ANCESTRAL SPECIES	4	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Kakapo	MODERN SPECIES	21	NAP1L4 (ENSSHBG00005003673)	CARS1 (ENSSHBG00005003699)	ENSSHBG00005003742	OSBPL5 (ENSSHBG00005003762)	ENSSHBG00005003781	PTPN5 (ENSSHBG00005003830)	TMEM86A (ENSSHBG00005003850)	SPTY2D1 (ENSSHBG00005003868)	UEVLD (ENSSHBG00005003887)	TSG101 (ENSSHBG00005003912)	LDHA (ENSSHBG00005003929)	GTF2H1 (ENSSHBG00005003950)	HPS5 (ENSSHBG00005003984)	ENSSHBG00005004000 ##21	SAAL1 (ENSSHBG00005004015) #21	TPH1 (ENSSHBG00005004036) #22	SERGEF (ENSSHBG00005004045) #23	KCNC1 (ENSSHBG00005004052) #24	MYOD1 (ENSSHBG00005004057) #25	ENSSHBG00005004063	OTOG (ENSSHBG00005004083) #26	USH1C (ENSSHBG00005000692) #27	ABCC8 (ENSSHBG00005000788) #28	KCNJ11 (ENSSHBG00005000811) #29	NUCB2 (ENSSHBG00005000815) #31	ENSSHBG00005012272 #33	ENSSHBG00005012355 #33	RPS13 (ENSSHBG00005012856)	PLEKHA7 (ENSSHBG00005012968) #35	C11orf58 (ENSSHBG00005013164) #36	SOX6 (ENSSHBG00005013226)
Golden eagle	MODERN SPECIES	7	PHLDA2 (ENSACCG00020011286)	NAP1L4 (ENSACCG00020011317)	CARS1 (ENSACCG00020011371)	ENSACCG00020011396	OSBPL5 (ENSACCG00020011408)	ENSACCG00020011450	PTPN5 (ENSACCG00020011520)	TMEM86A (ENSACCG00020011544)	SPTY2D1 (ENSACCG00020011558)	ENSACCG00020011654	LDHA (ENSACCG00020011744)	GTF2H1 (ENSACCG00020011784)	HPS5 (ENSACCG00020011823)	ENSACCG00020011849 ##21	SAAL1 (ENSACCG00020011891) #21	TPH1 (ENSACCG00020011925) #22	SERGEF (ENSACCG00020011956) #23	KCNC1 (ENSACCG00020011992) #24	MYOD1 (ENSACCG00020012010) #25	ENSACCG00020012030	OTOG (ENSACCG00020012135) #26	USH1C (ENSACCG00020012229) #27	ABCC8 (ENSACCG00020012283) #28	KCNJ11 (ENSACCG00020012371) #29	NUCB2 (ENSACCG00020012398) #31	PIK3C2A (ENSACCG00020012476) #33	RPS13 (ENSACCG00020012604)	ENSACCG00020012617	PLEKHA7 (ENSACCG00020012653) #35	C11orf58 (ENSACCG00020012713) #36	SOX6 (ENSACCG00020012746)
Passeriformes	ANCESTRAL SPECIES	5	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Passeriformes_d	ANCESTRAL SPECIES	5	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066.t	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066.t	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066.t	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Common canary	MODERN SPECIES	3	CARS1 (ENSSCAG00000004788)	ENSSCAG00000004800	OSBPL5 (ENSSCAG00000004823)	ENSSCAG00000004876	ENSSCAG00000004917	PTPN5 (ENSSCAG00000004927)	TMEM86A (ENSSCAG00000004939)	SPTY2D1 (ENSSCAG00000004949)	TSG101 (ENSSCAG00000004960)	ENSSCAG00000004978	LDHA (ENSSCAG00000004984)	GTF2H1 (ENSSCAG00000004990)	HPS5 (ENSSCAG00000005001)	ENSSCAG00000005016 ##21	SAAL1 (ENSSCAG00000005025) #21	TPH1 (ENSSCAG00000005038) #22	SERGEF (ENSSCAG00000005048) #23	KCNC1 (ENSSCAG00000005066) #24	MYOD1 (ENSSCAG00000005079) #25	ENSSCAG00000005088	OTOG (ENSSCAG00000005097) #26	USH1C (ENSSCAG00000005121) #27	ABCC8 (ENSSCAG00000005141) #28	KCNJ11 (ENSSCAG00000005168) #29	NUCB2 (ENSSCAG00000005171) #31	PIK3C2A (ENSSCAG00000005178) #33	RPS13 (ENSSCAG00000005185)	PLEKHA7 (ENSSCAG00000005218) #35	C11orf58 (ENSSCAG00000005235) #36	SOX6 (ENSSCAG00000005255)	INSC (ENSSCAG00000005272)
Zebra finch	MODERN SPECIES	27	NAP1L4 (ENSTGUG00000009146)	CARS1 (ENSTGUG00000009099)	ENSTGUG00000023289	OSBPL5 (ENSTGUG00000009038)	ENSTGUG00000009007	PTPN5 (ENSTGUG00000008983)	TMEM86A (ENSTGUG00000025382)	SPTY2D1 (ENSTGUG00000008968)	ENSTGUG00000008943	TSG101 (ENSTGUG00000008935)	LDHA (ENSTGUG00000008930)	ENSTGUG00000008904	HPS5 (ENSTGUG00000008872)	ENSTGUG00000025044 ##21	SAAL1 (ENSTGUG00000008863) #21	TPH1 (ENSTGUG00000008841) #22	SERGEF (ENSTGUG00000008830) #23	KCNC1 (ENSTGUG00000008821) #24	MYOD1 (ENSTGUG00000008814) #25	ENSTGUG00000008813	OTOG (ENSTGUG00000008789) #26	USH1C (ENSTGUG00000008748) #27	ABCC8 (ENSTGUG00000008682) #28	KCNJ11 (ENSTGUG00000008677) #29	NUCB2 (ENSTGUG00000008639) #31	PIK3C2A (ENSTGUG00000008575) #33	RPS13 (ENSTGUG00000008572)	PLEKHA7 (ENSTGUG00000008557) #35	C11orf58 (ENSTGUG00000024921) #36	SOX6 (ENSTGUG00000008522)	INSC (ENSTGUG00000008514)
Medium ground finch	MODERN SPECIES	140	CARS1 (ENSGFOG00000014356)	ENSGFOG00000014350	OSBPL5 (ENSGFOG00000014344)	ENSGFOG00000014341	ENSGFOG00000014338	PTPN5 (ENSGFOG00000014334)	TMEM86A (ENSGFOG00000014331)	SPTY2D1 (ENSGFOG00000014327)	UEVLD (ENSGFOG00000014324)	ENSGFOG00000014319	TSG101 (ENSGFOG00000014316)	LDHA (ENSGFOG00000014313)	GTF2H1 (ENSGFOG00000014308)	HPS5 (ENSGFOG00000014302)	SAAL1 (ENSGFOG00000014301) #21	TPH1 (ENSGFOG00000014298) #22	SERGEF (ENSGFOG00000014296) #23
Flycatcher	MODERN SPECIES	24	NAP1L4 (ENSFALG00000011431)	CARS1 (ENSFALG00000011418)	ENSFALG00000026772	ENSFALG00000027690	OSBPL5 (ENSFALG00000011338)	PTPN5 (ENSFALG00000011286)	TMEM86A (ENSFALG00000011276)	SPTY2D1 (ENSFALG00000011262)	ENSFALG00000011218	LDHA (ENSFALG00000011162)	GTF2H1 (ENSFALG00000011148)	HPS5 (ENSFALG00000011125)	ENSFALG00000011119 ##21	ENSFALG00000024967 ##21	SAAL1 (ENSFALG00000011111) #21	TPH1 (ENSFALG00000011078) #22	SERGEF (ENSFALG00000011059) #23	KCNC1 (ENSFALG00000000754) #24	MYOD1 (ENSFALG00000000758) #25	ENSFALG00000028324	OTOG (ENSFALG00000000765) #26	USH1C (ENSFALG00000000770) #27	ABCC8 (ENSFALG00000000775) #28	KCNJ11 (ENSFALG00000014605) #29	NUCB2 (ENSFALG00000000778) #31	PIK3C2A (ENSFALG00000000780) #33	RPS13 (ENSFALG00000000784)	PLEKHA7 (ENSFALG00000000789) #35	C11orf58 (ENSFALG00000026715) #36	SOX6 (ENSFALG00000000798)	INSC (ENSFALG00000000814)
Great tit	MODERN SPECIES	25	PHLDA2 (ENSPMJG00000009169)	NAP1L4 (ENSPMJG00000009153)	CARS1 (ENSPMJG00000009119)	ENSPMJG00000009118	OSBPL5 (ENSPMJG00000009085)	ENSPMJG00000008719	PTPN5 (ENSPMJG00000008706)	TMEM86A (ENSPMJG00000008704)	SPTY2D1 (ENSPMJG00000008684)	ENSPMJG00000008681	TSG101 (ENSPMJG00000008680)	LDHA (ENSPMJG00000008676)	GTF2H1 (ENSPMJG00000008670)	HPS5 (ENSPMJG00000008665)	SAAL1 (ENSPMJG00000008652) #21	TPH1 (ENSPMJG00000008649) #22	SERGEF (ENSPMJG00000008648) #23	KCNC1 (ENSPMJG00000008627) #24	MYOD1 (ENSPMJG00000008625) #25	ENSPMJG00000008624	OTOG (ENSPMJG00000008606) #26	USH1C (ENSPMJG00000008603) #27	ABCC8 (ENSPMJG00000008592) #28	KCNJ11 (ENSPMJG00000008589) #29	NUCB2 (ENSPMJG00000008588) #31	PIK3C2A (ENSPMJG00000008586) #33	RPS13 (ENSPMJG00000008585)	PLEKHA7 (ENSPMJG00000008582) #35	C11orf58 (ENSPMJG00000008572) #36	SOX6 (ENSPMJG00000008569)	ZDHHC13 (ENSPMJG00000008515)
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Anatidae	DUPLICATION
Anatidae	ANCESTRAL SPECIES	9	ENSGT00440000039564.a.b	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818.z	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.a #22	ENSGT00960000189946
Pink-footed goose	MODERN SPECIES	342						PTPN5 (ENSABRG00000018803)	TMEM86A (ENSABRG00000018851)	SPTY2D1 (ENSABRG00000018855)	UEVLD (ENSABRG00000018858)	TSG101 (ENSABRG00000018867)	LDHA (ENSABRG00000018899)	GTF2H1 (ENSABRG00000018911)	HPS5 (ENSABRG00000018923)	ENSABRG00000018930 ##21	SAAL1 (ENSABRG00000018937) #21	ENSABRG00000018950 #22	ENSABRG00000018968
Duck	MODERN SPECIES	23	PHLDA2 (ENSAPLG00000014648)	NAP1L4 (ENSAPLG00000014701)	CARS1 (ENSAPLG00000015062)	ENSAPLG00000002387	OSBPL5 (ENSAPLG00000002498)	PTPN5 (ENSAPLG00000007215)	TMEM86A (ENSAPLG00000019960)	SPTY2D1 (ENSAPLG00000006866)	ENSAPLG00000026425	ENSAPLG00000006338	LDHA (ENSAPLG00000005918)	GTF2H1 (ENSAPLG00000005620)	ENSAPLG00000005319	ENSAPLG00000005304	SAAL1 (ENSAPLG00000004998) #21	ENSAPLG00000004421 #22	ENSAPLG00000004400	OR4Q3 (ENSAPLG00000004398)	ENSAPLG00000000745	ENSAPLG00000000744	ENSAPLG00000000742	ENSAPLG00000027048	ENSAPLG00000024346	RHOD (ENSAPLG00000018804)	KDM2A (ENSAPLG00000003636)	TMEM132A (ENSAPLG00000017236)	CD6 (ENSAPLG00000018616)	ENSAPLG00000018569	VPS37C (ENSAPLG00000029540)	ENSAPLG00000007772	ENSAPLG00000018017
Anatidae	ANCESTRAL SPECIES	33	ENSGT00390000004456	ENSGT00940000164881	ENSGT00940000158268.a	ENSGT00440000037417.A	ENSGT00950000182976.a.b	ENSGT00940000157402	ENSGT00390000006758.b	ENSGT00940000155960.b	ENSGT00530000063472.b.b.a.b	ENSGT00390000002169	ENSGT00940000154910.b.b	ENSGT00940000155948	ENSGT00940000160055	ENSGT01050000244951.a.b.a.a	ENSGT00940000153962.a	ENSGT00950000182885.A.a.b #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Pink-footed goose	MODERN SPECIES	33	EIF3M (ENSABRG00000017863)	ENSABRG00000017856	PRRG4 (ENSABRG00000017851)	QSER1 (ENSABRG00000017838)	DEPDC7 (ENSABRG00000017835)	TCP11L1 (ENSABRG00000017828)	CSTF3 (ENSABRG00000017719)	HIPK3 (ENSABRG00000017587)	KIAA1549L (ENSABRG00000017560)	ENSABRG00000017553	SPON1 (ENSABRG00000017512)	SYT9 (ENSABRG00000017501)	OLFML1 (ENSABRG00000017498)	PPFIBP2 (ENSABRG00000017439)	CYB5R2 (ENSABRG00000017412)	ENSABRG00000017358 #22	SERGEF (ENSABRG00000017340) #23	KCNC1 (ENSABRG00000017337) #24	MYOD1 (ENSABRG00000017333) #25	ENSABRG00000017331	OTOG (ENSABRG00000017284) #26	USH1C (ENSABRG00000017259) #27	ABCC8 (ENSABRG00000014379) #28	KCNJ11 (ENSABRG00000014070) #29	NUCB2 (ENSABRG00000014061) #31	PIK3C2A (ENSABRG00000014041) #33	RPS13 (ENSABRG00000014031)	PLEKHA7 (ENSABRG00000014016) #35	C11orf58 (ENSABRG00000013996) #36	SOX6 (ENSABRG00000013981)	ENSABRG00000013975
Duck	MODERN SPECIES	23	PRRG4 (ENSAPLG00000006630)	QSER1 (ENSAPLG00000006676)	DEPDC7 (ENSAPLG00000006814)	ENSAPLG00000006924	ENSAPLG00000026679	ENSAPLG00000017408	CSTF3 (ENSAPLG00000007217)	HIPK3 (ENSAPLG00000007742)	KIAA1549L (ENSAPLG00000008459)	C11orf91 (ENSAPLG00000017898)	SPON1 (ENSAPLG00000006849)	SYT9 (ENSAPLG00000006733)	OLFML1 (ENSAPLG00000006707)	PPFIBP2 (ENSAPLG00000006571)	CYB5R2 (ENSAPLG00000006316)	ENSAPLG00000006128 #22	SERGEF (ENSAPLG00000005876) #23	KCNC1 (ENSAPLG00000005789) #24	MYOD1 (ENSAPLG00000005673) #25	OTOG (ENSAPLG00000008072) #26	USH1C (ENSAPLG00000008735) #27	ABCC8 (ENSAPLG00000009025) #28	KCNJ11 (ENSAPLG00000021853) #29	NUCB2 (ENSAPLG00000010426) #31	PIK3C2A (ENSAPLG00000010801) #33	RPS13 (ENSAPLG00000011983)	PLEKHA7 (ENSAPLG00000008901) #35	C11orf58 (ENSAPLG00000018784) #36	SOX6 (ENSAPLG00000008744)	INSC (ENSAPLG00000008621)	CALCB (ENSAPLG00000008604)
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b.a #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Japanese quail	MODERN SPECIES	23	NAP1L4 (ENSCJPG00005010758)	CARS1 (ENSCJPG00005010761)	ENSCJPG00005010762	OSBPL5 (ENSCJPG00005010764)	ENSCJPG00005010766	PTPN5 (ENSCJPG00005010769)	TMEM86A (ENSCJPG00005010770)	SPTY2D1 (ENSCJPG00005010771)	ENSCJPG00005010772	TSG101 (ENSCJPG00005010773)	LDHA (ENSCJPG00005010774)	GTF2H1 (ENSCJPG00005010775)	HPS5 (ENSCJPG00005010777)	ENSCJPG00005010778 ##21	SAAL1 (ENSCJPG00005010779) #21	TPH1 (ENSCJPG00005010780) #22	SERGEF (ENSCJPG00005010791) #23	KCNC1 (ENSCJPG00005010792) #24	ENSCJPG00005010796	ENSCJPG00005010797	PRR5L (ENSCJPG00005010799)	TRAF6 (ENSCJPG00005010800)	RAG1 (ENSCJPG00005010801)	IFTAP (ENSCJPG00005010802)	LRRC4C (ENSCJPG00005010806)	API5 (ENSCJPG00005010812)	TTC17 (ENSCJPG00005010813)	HSD17B12 (ENSCJPG00005010818)	ALKBH3 (ENSCJPG00005010819)	C11orf96 (ENSCJPG00005010820)	ENSCJPG00005010821
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00440000039564.a.b	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.b ##21	ENSGT00390000004737.b.b.a #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B	ENSGT00390000001511
Chicken	MODERN SPECIES	34	PHLDA2 (ENSGALG00010024128)	NAP1L4 (ENSGALG00010024112)	CARS (ENSGALG00010024081)	ENSGALG00010024052	OSBPL5 (ENSGALG00010024035)	PTPRJ (ENSGALG00010024013)	PTPN5 (ENSGALG00010024540)	TMEM86A (ENSGALG00010024532)	SPTY2D1 (ENSGALG00010024513)	UEVLD (ENSGALG00010024496)	LDHA (ENSGALG00010024472)	GTF2H1 (ENSGALG00010024469)	HPS5 (ENSGALG00010024454)	SAA (ENSGALG00010024441) ##21	SAAL1 (ENSGALG00010024428) #21	TPH1 (ENSGALG00010026924) #22	SERGEF (ENSGALG00010024423) #23	KCNC1 (ENSGALG00010024401) #24	MYOD1 (ENSGALG00010024369) #25	FTL (ENSGALG00010024360)	OTOG (ENSGALG00010024347) #26	USH1C (ENSGALG00010025330) #27	ENSGALG00010023291	ABCC8 (ENSGALG00010023276) #28	KCNJ11 (ENSGALG00010023268) #29	NUCB2 (ENSGALG00010023238) #31	PIK3C2A (ENSGALG00010023209) #33	RPS13 (ENSGALG00010023199)	PLEKHA7 (ENSGALG00010023181) #35	C11orf58 (ENSGALG00010023144) #36	SOX6 (ENSGALG00010023131)
Turkey	MODERN SPECIES	25	ENSMGAG00000022245	ENSMGAG00000006867	ENSMGAG00000019220 #33	ENSMGAG00000006883 #33	ENSMGAG00000021792 #31	ENSMGAG00000006961 #29	ENSMGAG00000006904 #31	ENSMGAG00000006967 #28	ENSMGAG00000020676 #28	ENSMGAG00000021863 #26	ENSMGAG00000017195 #26	ENSMGAG00000007193	MYOD1 (ENSMGAG00000007210) #25	ENSMGAG00000007219 #24	ENSMGAG00000018777 #23	ENSMGAG00000007226 #22	ENSMGAG00000007273 #21	ENSMGAG00000017600 #21	ENSMGAG00000022734 ##21	ENSMGAG00000007279	ENSMGAG00000021100	ENSMGAG00000007354	ENSMGAG00000007372	ENSMGAG00000020292	ENSMGAG00000021944	ENSMGAG00000007465	ENSMGAG00000007501	ENSMGAG00000007515	ENSMGAG00000007528	ENSMGAG00000007545	ENSMGAG00000007614
African ostrich	MODERN SPECIES	408										TSG101 (ENSSCUG00000007436)	LDHA (ENSSCUG00000007434)	GTF2H1 (ENSSCUG00000007432)	HPS5 (ENSSCUG00000007427)	ENSSCUG00000007424 ##21	SAAL1 (ENSSCUG00000007419) #21	TPH1 (ENSSCUG00000007415) #22	SERGEF (ENSSCUG00000007414) #23	KCNC1 (ENSSCUG00000007411) #24	ENSSCUG00000007406	OTOG (ENSSCUG00000007368) #26	USH1C (ENSSCUG00000007344) #27	ABCC8 (ENSSCUG00000007324) #28	KCNJ11 (ENSSCUG00000007310) #29	NUCB2 (ENSSCUG00000007308) #31	PIK3C2A (ENSSCUG00000007303) #33
Australian saltwater crocodile	MODERN SPECIES	64	OSBPL5 (ENSCPRG00005017206)	ENSCPRG00005017213	PTPRJ (ENSCPRG00005017215)	PTPN5 (ENSCPRG00005017224)	IGSF22 (ENSCPRG00005017227)	TMEM86A (ENSCPRG00005017229)	SPTY2D1 (ENSCPRG00005017230)	TSG101 (ENSCPRG00005017234)	ENSCPRG00005017243	LDHA (ENSCPRG00005017245)	GTF2H1 (ENSCPRG00005017249)	HPS5 (ENSCPRG00005017251)	ENSCPRG00005017256 ##21	ENSCPRG00005000214 ##21	SAAL1 (ENSCPRG00005000231) #21	TPH1 (ENSCPRG00005000260) #22	SERGEF (ENSCPRG00005000274) #23	KCNC1 (ENSCPRG00005000411) #24	MYOD1 (ENSCPRG00005000428) #25	ENSCPRG00005000446	OTOG (ENSCPRG00005000529) #26	USH1C (ENSCPRG00005000582) #27	ABCC8 (ENSCPRG00005000714) #28	KCNJ11 (ENSCPRG00005000802) #29	ENSCPRG00005000808 #30	NUCB2 (ENSCPRG00005000844) #31	PIK3C2A (ENSCPRG00005000874) #33	RPS13 (ENSCPRG00005000894)	PLEKHA7 (ENSCPRG00005000979) #35	C11orf58 (ENSCPRG00005001016) #36	SOX6 (ENSCPRG00005001080)
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00930000151070	ENSGT00940000159535	ENSGT00950000185387	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00930000151070	ENSGT00940000159535	ENSGT00950000185387	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b.fb.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626.c #28	ENSGT00980000200162	ENSGT00940000156626.d #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.g.b #30	ENSGT00940000163348.e.g.a #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00950000185387	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT01000000216403	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b.fb.b.b ##21	ENSGT00390000004737.b.a.o.a.a.a.b.gb ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626.d #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.g.b #30	ENSGT00940000163348.e.g.a #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35
Abingdon island giant tortoise	MODERN SPECIES	167															SAAL1 (ENSCABG00000015932) #21	TPH1 (ENSCABG00000015920) #22	ENSCABG00000015916	KCNC1 (ENSCABG00000015909) #24	MYOD1 (ENSCABG00000015907) #25	ENSCABG00000015905
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005012930	PTPRJ (ENSGEVG00005012489)	PTPN5 (ENSGEVG00005012381)	IGSF22 (ENSGEVG00005012213)	TMEM86A (ENSGEVG00005012053)	ENSGEVG00005011961	TSG101 (ENSGEVG00005011900)	LDHA (ENSGEVG00005011863)	GTF2H1 (ENSGEVG00005011817)	ENSGEVG00005011786 ##21	ENSGEVG00005011723	ENSGEVG00005011487	ENSGEVG00005011403 ##21	ENSGEVG00005011365 ##21	SAAL1 (ENSGEVG00005011345) #21	TPH1 (ENSGEVG00005011260) #22	SERGEF (ENSGEVG00005011075) #23	KCNC1 (ENSGEVG00005010986) #24	MYOD1 (ENSGEVG00005010944) #25	ENSGEVG00005010902	OTOG (ENSGEVG00005010473) #26	USH1C (ENSGEVG00005009326) #27	ENSGEVG00005009104	ABCC8 (ENSGEVG00005008865) #28	KCNJ11 (ENSGEVG00005008823) #29	ENSGEVG00005008800 #30	NUCB2 (ENSGEVG00005008771) #31	PIK3C2A (ENSGEVG00005008680) #33	RPS13 (ENSGEVG00005008637)	PLEKHA7 (ENSGEVG00005008609) #35	C11orf58 (ENSGEVG00005008546) #36
Emydidae	ANCESTRAL SPECIES	10	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a.o.a.a.a.b.fb.b ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626.d #28	ENSGT00940000156626.c #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e.g.b #30	ENSGT00940000163348.e.g.a #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35
Three-toed box turtle	MODERN SPECIES	346	PHLDA2 (ENSTMTG00000004570)	NAP1L4 (ENSTMTG00000004392)	CARS1 (ENSTMTG00000003616)	ENSTMTG00000003489	OSBPL5 (ENSTMTG00000003425)	PTPN5 (ENSTMTG00000003391)	IGSF22 (ENSTMTG00000023046)	TMEM86A (ENSTMTG00000023043)	SPTY2D1 (ENSTMTG00000023041)	ENSTMTG00000023039	TSG101 (ENSTMTG00000023038)	LDHA (ENSTMTG00000023037)	GTF2H1 (ENSTMTG00000023035)	HPS5 (ENSTMTG00000023014)	SAAL1 (ENSTMTG00000022994) #21	TPH1 (ENSTMTG00000022992) #22	SERGEF (ENSTMTG00000022991) #23	KCNC1 (ENSTMTG00000022989) #24	MYOD1 (ENSTMTG00000022988) #25	ENSTMTG00000022987	OTOG (ENSTMTG00000022982) #26	USH1C (ENSTMTG00000022976) #27	ENSTMTG00000022812 #28	ENSTMTG00000022696 #29
painted turtle	MODERN SPECIES	883																TPH1 (ENSCPBG00000017553) #22	SERGEF (ENSCPBG00000017555) #23	KCNC1 (ENSCPBG00000017557) #24	MYOD1 (ENSCPBG00000017560) #25	ENSCPBG00000017562	OTOG (ENSCPBG00000017566) #26	USH1C (ENSCPBG00000017570) #27	ABCC8 (ENSCPBG00000017576) #28	KCNJ11 (ENSCPBG00000017586) #29	ENSCPBG00000017587 #30	ENSCPBG00000017590 #30	PIK3C2A (ENSCPBG00000017597) #33	RPS13 (ENSCPBG00000017607)	PLEKHA7 (ENSCPBG00000017618) #35	C11orf58 (ENSCPBG00000017624) #36
Chinese turtle	MODERN SPECIES	1883	DMRTB1 (ENSPSIG00000002843)	ENSPSIG00000002840	ENSPSIG00000000496	PTPRJ (ENSPSIG00000002809)	ENSPSIG00000002805	PTPN5 (ENSPSIG00000002727)	IGSF22 (ENSPSIG00000002677)	TMEM86A (ENSPSIG00000002671)	SPTY2D1 (ENSPSIG00000002656)	ENSPSIG00000002651	TSG101 (ENSPSIG00000002634)	LDHA (ENSPSIG00000002611)	GTF2H1 (ENSPSIG00000002597)	HPS5 (ENSPSIG00000002586)	SAAL1 (ENSPSIG00000002551) #21	TPH1 (ENSPSIG00000002537) #22	KCNC1 (ENSPSIG00000002530) #24	ENSPSIG00000002528
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00930000151070	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000164956	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00940000175801.b	ENSGT00390000017491	ENSGT00940000155817.a.a #35
Episquamata	ANCESTRAL SPECIES		ENSGT00930000151070	ENSGT00500000044950	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00940000175801.b	ENSGT00390000017491	ENSGT00940000155817.a.a #35
Laterata	ANCESTRAL SPECIES	2	ENSGT00930000151070	ENSGT00500000044950	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00390000013383	ENSGT00940000154133.A	ENSGT00940000153903.a.b.b	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00920000149457	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Common wall lizard	MODERN SPECIES		ENSPMRG00000005439	ENSPMRG00000005433	OSBPL5 (ENSPMRG00000005419)	PTPRJ (ENSPMRG00000005401)	PTPN5 (ENSPMRG00000005389)	IGSF22 (ENSPMRG00000005349)	TMEM86A (ENSPMRG00000005342)	C18orf21 (ENSPMRG00000005336)	SPTY2D1 (ENSPMRG00000005330)	ENSPMRG00000005321	TSG101 (ENSPMRG00000005311)	LDHA (ENSPMRG00000005300)	GTF2H1 (ENSPMRG00000005288)	HPS5 (ENSPMRG00000005216)	SAAL1 (ENSPMRG00000005195) #21	TPH1 (ENSPMRG00000005139) #22	SERGEF (ENSPMRG00000005122) #23	KCNC1 (ENSPMRG00000005116) #24	MYOD1 (ENSPMRG00000005112) #25	ENSPMRG00000005107	OTOG (ENSPMRG00000005049) #26	USH1C (ENSPMRG00000005026) #27	ABCC8 (ENSPMRG00000002883) #28	KCNJ11 (ENSPMRG00000002356) #29	ENSPMRG00000002342 #30	NUCB2 (ENSPMRG00000002326) #31	PIK3C2A (ENSPMRG00000001137) #33	RPS13 (ENSPMRG00000000463)	PLEKHA7 (ENSPMRG00000000278) #35	C11orf58 (ENSPMRG00000000197) #36	SOX6 (ENSPMRG00000000151)
Argentine black and white tegu	MODERN SPECIES	3	PSMG1 (ENSSMRG00000014190)	OSBPL5 (ENSSMRG00000014191)	PTPRJ (ENSSMRG00000014192)	PTPN5 (ENSSMRG00000014194)	ENSSMRG00000014196	IGSF22 (ENSSMRG00000014197)	TMEM86A (ENSSMRG00000014198)	ENSSMRG00000014201	SPTY2D1 (ENSSMRG00000014202)	UEVLD (ENSSMRG00000014203)	TSG101 (ENSSMRG00000014204)	LDHA (ENSSMRG00000014205)	GTF2H1 (ENSSMRG00000014206)	HPS5 (ENSSMRG00000014207)	SAAL1 (ENSSMRG00000014475) #21	TPH1 (ENSSMRG00000014476) #22	SERGEF (ENSSMRG00000014477) #23	KCNC1 (ENSSMRG00000014480) #24	MYOD1 (ENSSMRG00000014495) #25	ENSSMRG00000014497	OTOG (ENSSMRG00000014503) #26	USH1C (ENSSMRG00000014516) #27	ABCC8 (ENSSMRG00000014918) #28	ENSSMRG00000014922	KCNJ11 (ENSSMRG00000014924) #29	ENSSMRG00000014927 #30	ENSSMRG00000014929 #30	NUCB2 (ENSSMRG00000014933) #31	PIK3C2A (ENSSMRG00000014936) #33	RPS13 (ENSSMRG00000014938)	PLEKHA7 (ENSSMRG00000014940) #35
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00500000044950	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813 #33	ENSGT00940000175801.b	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Elapidae	ANCESTRAL SPECIES	3	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00500000044950	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00980000200162	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813.e #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36	ENSGT00940000156433.B
Elapidae_a	ANCESTRAL SPECIES	29	ENSGT00390000006347.a	ENSGT00930000151070	ENSGT00500000044950	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626.e #28	ENSGT00980000200162	ENSGT00940000156626.f #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813.e #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Acanthophiinae	ANCESTRAL SPECIES	29	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00500000044950	ENSGT00940000159535	ENSGT00940000156870	ENSGT00940000159916	ENSGT00940000160123	ENSGT00390000007101.d.b	ENSGT00940000154133.A	ENSGT00940000164122	ENSGT00940000153903.a.a	ENSGT00940000153201.j	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626.e #28	ENSGT00980000200162	ENSGT00940000156626.f #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30	ENSGT00390000001927.a #31	ENSGT00940000157813.e #33	ENSGT00390000017491	ENSGT00940000155817.a.a #35	ENSGT00390000000687 #36
Mainland tiger snake	MODERN SPECIES	22	NAP1L4 (ENSNSUG00000017466)	CARS1 (ENSNSUG00000017473)	PSMG1 (ENSNSUG00000018054)	OSBPL5 (ENSNSUG00000018055)	PTPRJ (ENSNSUG00000018065)	PTPN5 (ENSNSUG00000018080)	TMEM86A (ENSNSUG00000018086)	SPTY2D1 (ENSNSUG00000018105)	ENSNSUG00000018106	TSG101 (ENSNSUG00000018109)	LDHA (ENSNSUG00000018110)	ENSNSUG00000018111	ENSNSUG00000018112	ENSNSUG00000018113	SAAL1 (ENSNSUG00000018114) #21	TPH1 (ENSNSUG00000018121) #22	SERGEF (ENSNSUG00000018122) #23	KCNC1 (ENSNSUG00000018123) #24	MYOD1 (ENSNSUG00000018125) #25	OTOG (ENSNSUG00000018126) #26	USH1C (ENSNSUG00000018127) #27	ABCC8 (ENSNSUG00000018128) #28	KCNJ11 (ENSNSUG00000018189) #29	ENSNSUG00000018191 #30	NUCB2 (ENSNSUG00000018192) #31	ENSNSUG00000018193 #33	ENSNSUG00000018194 #33	RPS13 (ENSNSUG00000018197)	PLEKHA7 (ENSNSUG00000018214) #35	C11orf58 (ENSNSUG00000018419) #36	SOX6 (ENSNSUG00000018420)
Eastern brown snake	MODERN SPECIES	32	NAP1L4 (ENSPTXG00000000988)	CARS1 (ENSPTXG00000000979)	PSMG1 (ENSPTXG00000000972)	OSBPL5 (ENSPTXG00000000956)	PTPRJ (ENSPTXG00000000941)	PTPN5 (ENSPTXG00000000933)	IGSF22 (ENSPTXG00000000928)	TMEM86A (ENSPTXG00000000920)	SPTY2D1 (ENSPTXG00000000916)	ENSPTXG00000000912	TSG101 (ENSPTXG00000000909)	LDHA (ENSPTXG00000000902)	GTF2H1 (ENSPTXG00000000897)	HPS5 (ENSPTXG00000000894)	SAAL1 (ENSPTXG00000000891) #21	TPH1 (ENSPTXG00000000890) #22	SERGEF (ENSPTXG00000000888) #23	KCNC1 (ENSPTXG00000000887) #24	MYOD1 (ENSPTXG00000000885) #25	OTOG (ENSPTXG00000000874) #26	USH1C (ENSPTXG00000000688) #27	ENSPTXG00000000668	ENSPTXG00000000661 #28	KCNJ11 (ENSPTXG00000000659) #29	ENSPTXG00000000655 #30	NUCB2 (ENSPTXG00000000649) #31	PIK3C2A (ENSPTXG00000000640) #33	RPS13 (ENSPTXG00000000631)	PLEKHA7 (ENSPTXG00000000617) #35	C11orf58 (ENSPTXG00000000613) #36	SOX6 (ENSPTXG00000000601)
Blue-lipped sea krait	MODERN SPECIES	8262																TPH1 (ENSLLTG00000010346) #22
Indian cobra	MODERN SPECIES		CARS1 (ENSNNAG00000010101)	ENSNNAG00000010198	PSMG1 (ENSNNAG00000010243)	OSBPL5 (ENSNNAG00000010423)	PTPRJ (ENSNNAG00000012938)	PTPN5 (ENSNNAG00000012998)	IGSF22 (ENSNNAG00000013035)	TMEM86A (ENSNNAG00000013088)	SPTY2D1 (ENSNNAG00000013097)	ENSNNAG00000013120	TSG101 (ENSNNAG00000013150)	LDHA (ENSNNAG00000013178)	GTF2H1 (ENSNNAG00000013205)	HPS5 (ENSNNAG00000013337)	SAAL1 (ENSNNAG00000013771) #21	TPH1 (ENSNNAG00000013808) #22	SERGEF (ENSNNAG00000013832) #23	KCNC1 (ENSNNAG00000013849) #24	ENSNNAG00000013869	MYOD1 (ENSNNAG00000013885) #25	OTOG (ENSNNAG00000013913) #26	USH1C (ENSNNAG00000014394) #27	ABCC8 (ENSNNAG00000015317) #28	KCNJ11 (ENSNNAG00000016074) #29	ENSNNAG00000016077	NUCB2 (ENSNNAG00000016084) #31	PIK3C2A (ENSNNAG00000016104) #33	RPS13 (ENSNNAG00000016191)	PLEKHA7 (ENSNNAG00000016200) #35	C11orf58 (ENSNNAG00000016255) #36	SOX6 (ENSNNAG00000016276)
Lizard	MODERN SPECIES		ENSACAG00000000071	OSBPL5 (ENSACAG00000000070)	ENSACAG00000000068	ENSACAG00000040931	PTPN5 (ENSACAG00000000067)	IGSF22 (ENSACAG00000000066)	ENSACAG00000043092	TMEM86A (ENSACAG00000000065)	ENSACAG00000000064	ENSACAG00000000063	TSG101 (ENSACAG00000000062)	ENSACAG00000000061	GTF2H1 (ENSACAG00000000060)	HPS5 (ENSACAG00000000059)	SAAL1 (ENSACAG00000000058) #21	TPH1 (ENSACAG00000000057) #22	SERGEF (ENSACAG00000028890) #23	KCNC1 (ENSACAG00000000055) #24	MYOD1 (ENSACAG00000039537) #25	ENSACAG00000037486	ENSACAG00000038180	OTOG (ENSACAG00000000052) #26	USH1C (ENSACAG00000000051) #27	ABCC8 (ENSACAG00000000048) #28	KCNJ11 (ENSACAG00000000047) #29	NUCB2 (ENSACAG00000000046) #31	PIK3C2A (ENSACAG00000000045) #33	RPS13 (ENSACAG00000000044)	ENSACAG00000038754	PLEKHA7 (ENSACAG00000000043) #35	C11orf58 (ENSACAG00000000042) #36
tuatara	MODERN SPECIES	351															SAAL1 (ENSSPUG00000001931) #21	TPH1 (ENSSPUG00000001908) #22	SERGEF (ENSSPUG00000001823) #23	KCNC1 (ENSSPUG00000001801) #24	MYOD1 (ENSSPUG00000001769) #25	ENSSPUG00000001764	OTOG (ENSSPUG00000001672) #26	USH1C (ENSSPUG00000001606) #27
Anura	ANCESTRAL SPECIES	163		ENSGT00940000160333	ENSGT00440000039564.a.b	ENSGT00940000153362.b	ENSGT00390000006347.a	ENSGT00940000159916	ENSGT00390000007101.d.b	ENSGT00940000164956	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A	ENSGT00940000153903.a.a	ENSGT00940000153201	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00950000182959.b.b #25	ENSGT00940000157490 #26	ENSGT00950000183002.A #27	ENSGT00940000156626 #28	ENSGT00990000203615.a.a.a.b #29	ENSGT00940000163348.e #30
Frog	MODERN SPECIES	4	ENSXETG00000037688	ENSXETG00000022467	ENSXETG00000044992	ENSXETG00000022463	XB5846708 [provisional] (ENSXETG00000035870)	ENSXETG00000042912	ENSXETG00000047592	ENSXETG00000037097	ENSXETG00000041634	XB995201 [provisional] (ENSXETG00000022477)	ENSXETG00000045579 #30	ENSXETG00000046872 #29	abcc8 (ENSXETG00000046120) #28	gtf2h1 (ENSXETG00000018992)	saal1 (ENSXETG00000018990) #21	ENSXETG00000048806 #22	ENSXETG00000042377	sergef (ENSXETG00000014410) #23	kcnc1 (ENSXETG00000014391) #24	MYOD1 (ENSXETG00000046866) #25	OTOG (ENSXETG00000048795) #26	ENSXETG00000049215	ENSXETG00000044994	ENSXETG00000048951	ush1c (ENSXETG00000043793) #27	tsg101 (ENSXETG00000046442)	ldha (ENSXETG00000041431)	uevld (ENSXETG00000008509)	spty2d1 (ENSXETG00000043007)	ENSXETG00000047278	ENSXETG00000044019
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000029364	ENSLLEG00000029465	PTPN5 (ENSLLEG00000030009)	ENSLLEG00000030032	TMEM86A (ENSLLEG00000030039)	ENSLLEG00000030053	ENSLLEG00000030060	SPTY2D1 (ENSLLEG00000030067)	ENSLLEG00000008744	ENSLLEG00000009178	LDHA (ENSLLEG00000009417)	GTF2H1 (ENSLLEG00000009515)	HPS5 (ENSLLEG00000009676)	ENSLLEG00000009816	SAAL1 (ENSLLEG00000009836) #21	TPH1 (ENSLLEG00000009964) #22	SERGEF (ENSLLEG00000010129) #23	ENSLLEG00000010621 #24	MYOD1 (ENSLLEG00000010740) ##25	ENSLLEG00000010818 #26	ENSLLEG00000010952 #27	ABCC8 (ENSLLEG00000011143) #28	KCNJ11 (ENSLLEG00000012239) #29	ENSLLEG00000012269 #30	NDUFB7 (ENSLLEG00000012433)	ENSLLEG00000012464	GAS2 (ENSLLEG00000012505)	ENSLLEG00000012539	SLC17A6 (ENSLLEG00000012588)	ENSLLEG00000012910	ANO5 (ENSLLEG00000012984)
Coelacanth	MODERN SPECIES	288						PTPN5 (ENSLACG00000007406)	IGSF22 (ENSLACG00000008077)	TMEM86A (ENSLACG00000008872)	SPTY2D1 (ENSLACG00000009475)	ENSLACG00000009769	TSG101 (ENSLACG00000010221)	LDHA (ENSLACG00000010504)	GTF2H1 (ENSLACG00000011123)	HPS5 (ENSLACG00000011372)	SAAL1 (ENSLACG00000011733) #21	TPH1 (ENSLACG00000012424) #22	SERGEF (ENSLACG00000012618) #23	KCNC1 (ENSLACG00000013857) #24	MYOD1 (ENSLACG00000014430) ##25	zgc:172145 (ENSLACG00000014515)	ENSLACG00000014612 ##25	OTOG (ENSLACG00000015455) #26	USH1C (ENSLACG00000016027) #27	ABCC8 (ENSLACG00000016365) #28	KCNJ11 (ENSLACG00000016707) #29	ENSLACG00000016827 #30	ENSLACG00000016883 #30	NUCB2 (ENSLACG00000016943) #31	rps13 (ENSLACG00000017012)	PIK3C2A (ENSLACG00000017040) #33	rps13 (ENSLACG00000017174)
Actinopterygii	ANCESTRAL SPECIES	235		ENSGT00950000182838.A.a.b	ENSGT00940000161708	ENSGT00940000156076.b	ENSGT00940000163235.E	ENSGT00940000156076.a.a.a.b	ENSGT00940000162219	ENSGT00940000163235.A.a	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.a	ENSGT00390000013104	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00940000158805.a
Reedfish	MODERN SPECIES	10	ENSECRG00000018859	ENSECRG00000018942	ENSECRG00000018958	ENSECRG00000018989	ENSECRG00000019022	ENSECRG00000019098	ENSECRG00000019112	ENSECRG00000019142	ENSECRG00000019182	ENSECRG00000019294	ENSECRG00000019358	tollip (ENSECRG00000019479)	gtf2h1 (ENSECRG00000020145)	hps5 (ENSECRG00000020169)	saal1 (ENSECRG00000020202) #21	tph1a (ENSECRG00000020243) #22	SERGEF (ENSECRG00000020331) #23	kcnc1b (ENSECRG00000020345) #24	ENSECRG00000020361	cd81a (ENSECRG00000020373)	pkp3a (ENSECRG00000020384)	sigirr (ENSECRG00000020400)	ANO9 (ENSECRG00000020421)	tssc4 (ENSECRG00000020443)	ANO5 (ENSECRG00000020470)	ANO5 (ENSECRG00000020547)	ENSECRG00000020575	slc17a6b (ENSECRG00000020603)	ENSECRG00000020648	GAS2 (ENSECRG00000020659)	svip (ENSECRG00000020675)
Neopterygii	ANCESTRAL SPECIES	4								ENSGT00950000182838.A.a.b	ENSGT00940000161708	ENSGT00940000156076.a.a.a.b	ENSGT00390000013104	ENSGT00390000015066	ENSGT00940000155818	ENSGT00390000004737.b.a ##21	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00940000158805.a	ENSGT00940000159515	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300	ENSGT00390000011846	ENSGT00940000155692	ENSGT01030000234621.E	ENSGT00940000155891	ENSGT00390000005623	ENSGT01050000245471	ENSGT00940000155755	ENSGT00940000167680	ENSGT00940000156257
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182885.A.a.e #22
Clupeocephala	ANCESTRAL SPECIES	299																ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00940000157698.b	ENSGT00940000157925	ENSGT00390000014756	ENSGT00940000159058
Euteleosteomorpha	ANCESTRAL SPECIES	48																ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT01050000245471	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00940000157698.b	ENSGT00940000157925	ENSGT00390000014756
Acanthomorphata	ANCESTRAL SPECIES	327															ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846
Euacanthomorphacea	ANCESTRAL SPECIES	163															ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846
Percomorphaceae	ANCESTRAL SPECIES	23	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00530000063829.B	ENSGT00390000006020	ENSGT00940000171971	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00390000017828	ENSGT00390000009505	ENSGT00390000007315	ENSGT00940000158970
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00390000017392	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00390000001014.`b.a	ENSGT00940000161356	ENSGT00940000157816.a.b	ENSGT00940000166897	ENSGT00940000161128
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00390000017392	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00390000001014.`b.a	ENSGT00940000161356	ENSGT00940000157816.a.b	ENSGT00940000166897	ENSGT00940000161128
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00390000017392	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00390000001014.`b.a	ENSGT00940000161356	ENSGT00940000157816.a.b	ENSGT00940000166897	ENSGT00940000161128
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00390000017392	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00390000001014.`b.a	ENSGT00940000161356	ENSGT00940000157816.a.b	ENSGT00940000166897	ENSGT00940000161128
Aplocheiloidei	ANCESTRAL SPECIES	67			ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00390000017392	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00390000001014.`b.a	ENSGT00940000161356	ENSGT00940000157816.a.b	ENSGT00940000166897	ENSGT00940000161128
Mangrove rivulus	MODERN SPECIES	48			MMP15 (ENSKMAG00000013964)	dhcr7 (ENSKMAG00000013920)	ENSKMAG00000013846	ENSKMAG00000013775	DPY19L3 (ENSKMAG00000013681)	ZNF507 (ENSKMAG00000013647)	tshz3b (ENSKMAG00000013627)	ZNF536 (ENSKMAG00000013518)	ccne1 (ENSKMAG00000013484)	zgc:162297 (ENSKMAG00000013465)	si:ch211-260e23.9 (ENSKMAG00000013454)	si:ch211-260e23.8 (ENSKMAG00000013444)	AP2A2 (ENSKMAG00000013307)	tph1b (ENSKMAG00000013199) #22	cd81a (ENSKMAG00000013135)	ENSKMAG00000013110	ANO9 (ENSKMAG00000013068)	ENSKMAG00000013039	shcbp1 (ENSKMAG00000013021)	spg21 (ENSKMAG00000012981)	pdcd7 (ENSKMAG00000012951)	UBAP1L (ENSKMAG00000012933)	KBTBD13 (ENSKMAG00000012922)	rasl12 (ENSKMAG00000012899)	uqcrfs1 (ENSKMAG00000012886)	vstm2b (ENSKMAG00000012875)	ccnd1 (ENSKMAG00000012851)	lto1 (ENSKMAG00000012842)	fgf3 (ENSKMAG00000012820)
Turquoise killifish	MODERN SPECIES	1616	ENSNFUG00015007250	fah (ENSNFUG00015007184)	arnt2 (ENSNFUG00015007147)	ENSNFUG00015007069	ENSNFUG00015007031	ENSNFUG00015007022	DPY19L3 (ENSNFUG00015006901)	BX323051.1 (ENSNFUG00015006868)	ZNF536 (ENSNFUG00015006855)	RAB5C (ENSNFUG00015006841)	kat2a (ENSNFUG00015005901)	dhx58 (ENSNFUG00015005787)	ENSNFUG00015005771	ENSNFUG00015005681	ENSNFUG00015005648	tph1b (ENSNFUG00015004549) #22	CD81 (ENSNFUG00015004324)	PKP3 (ENSNFUG00015004312)	ENSNFUG00015004280	ccn6 (ENSNFUG00015021678)	tube1 (ENSNFUG00015021654)	RASA3 (ENSNFUG00015020723)	pros1 (ENSNFUG00015020528)	ENSNFUG00015020522	GAS6 (ENSNFUG00015020429)	TMEM255B (ENSNFUG00015020417)	grk1a (ENSNFUG00015020408)	TMCO3 (ENSNFUG00015020395)	RP42-PEN (ENSNFUG00015020369)	ENSNFUG00015020363	adprhl1 (ENSNFUG00015020358)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00940000158773	ENSGT01030000234515.a.b.a.b.a	ENSGT00390000001790	ENSGT00940000158068	ENSGT00940000158815	ENSGT00940000160363	ENSGT01050000244857.C.a.a	ENSGT00940000166109	ENSGT00940000153289.b	ENSGT00940000162219
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000154285.b.a.b	ENSGT00940000155621.uc.a	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00940000158773	ENSGT01030000234515.a.b.a.b.a	ENSGT00390000001790	ENSGT00940000158068	ENSGT00940000158815	ENSGT00940000160363	ENSGT01050000244857.C.a.a	ENSGT00940000166109	ENSGT00940000153289.b	ENSGT00940000162219
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000155621.uc.a	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00770000121709.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00940000158773	ENSGT01030000234515.a.b.a.b.a	ENSGT00390000001790	ENSGT00940000158068	ENSGT00940000158815	ENSGT00940000160363	ENSGT01050000244857.C.a.a	ENSGT00940000166109	ENSGT00940000153289.b	ENSGT00940000162219
NAME_6	ANCESTRAL SPECIES	156										ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00940000158773	ENSGT01030000234515.a.b.a.b.a	ENSGT00390000001790	ENSGT00940000158068	ENSGT00940000158815.k	ENSGT00940000160363	ENSGT01050000244857.C.a.a	ENSGT00940000166109	ENSGT00940000153289.b	ENSGT00940000162219
Amazon molly	MODERN SPECIES	469										ZNF536 (ENSPFOG00000011945)	ccne1 (ENSPFOG00000011801)	zgc:162297 (ENSPFOG00000011770)	si:ch211-260e23.9 (ENSPFOG00000011757)	si:ch211-260e23.8 (ENSPFOG00000011738)	AP2A2 (ENSPFOG00000011469)	tph1b (ENSPFOG00000011276) #22	cd81a (ENSPFOG00000011199)	PKP3 (ENSPFOG00000011157)	ANO9 (ENSPFOG00000010944)	ENSPFOG00000022850	shcbp1 (ENSPFOG00000010794)	ADAMTS17 (ENSPFOG00000010391)	CERS3 (ENSPFOG00000024400)	ENSPFOG00000022632	asb7 (ENSPFOG00000010372)	aldh1a3 (ENSPFOG00000010138)	LRRK1 (ENSPFOG00000009664)	chsy1 (ENSPFOG00000009614)	selenos (ENSPFOG00000009521)	snrpa1 (ENSPFOG00000009373)	ENSPFOG00000009071
Sailfin molly	MODERN SPECIES	1033																tph1b (ENSPLAG00000009921) #22	cd81a (ENSPLAG00000009950)	PKP3 (ENSPLAG00000009958)	ANO9 (ENSPLAG00000009978)	ENSPLAG00000009998	shcbp1 (ENSPLAG00000010010)	ADAMTS17 (ENSPLAG00000010055)	CERS3 (ENSPLAG00000010079)	ENSPLAG00000010121	asb7 (ENSPLAG00000010129)	ENSPLAG00000010145
Guppy	MODERN SPECIES	455	ENSPREG00000003227	MMP15 (ENSPREG00000003188)	dhcr7 (ENSPREG00000003156)	ENSPREG00000003099	ENSPREG00000003074	ENSPREG00000003021	DPY19L3 (ENSPREG00000002951)	ZNF507 (ENSPREG00000002931)	tshz3b (ENSPREG00000002892)	ZNF536 (ENSPREG00000002877)	ccne1 (ENSPREG00000002831)	si:ch211-260e23.9 (ENSPREG00000002819)	zgc:162297 (ENSPREG00000002811)	si:ch211-260e23.8 (ENSPREG00000002800)	AP2A2 (ENSPREG00000002738)	tph1b (ENSPREG00000002705) #22	cd81a (ENSPREG00000002691)	PKP3 (ENSPREG00000002677)	ANO9 (ENSPREG00000002635)	ENSPREG00000002616	shcbp1 (ENSPREG00000002607)	ADAMTS17 (ENSPREG00000002523)	CERS3 (ENSPREG00000002486)	ENSPREG00000002480	aldh1a3 (ENSPREG00000002437)	ENSPREG00000002364	chsy1 (ENSPREG00000002339)	selenos (ENSPREG00000002323)	snrpa1 (ENSPREG00000002296)	ENSPREG00000002265	ENSPREG00000002244
Platyfish	MODERN SPECIES	18	dhcr7 (ENSXMAG00000028573)	ENSXMAG00000003882	ENSXMAG00000000960	DPY19L3 (ENSXMAG00000024630)	ENSXMAG00000026560	ZNF507 (ENSXMAG00000028404)	tshz3b (ENSXMAG00000026360)	ENSXMAG00000023398	ZNF536 (ENSXMAG00000000995)	ENSXMAG00000029430	ccne1 (ENSXMAG00000001005)	zgc:162297 (ENSXMAG00000025425)	si:ch211-260e23.9 (ENSXMAG00000027644)	si:ch211-260e23.8 (ENSXMAG00000001040)	AP2A2 (ENSXMAG00000001043)	tph1b (ENSXMAG00000001087) #22	cd81a (ENSXMAG00000023163)	PKP3 (ENSXMAG00000029924)	ANO9 (ENSXMAG00000001137)	ENSXMAG00000022390	shcbp1 (ENSXMAG00000001155)	ADAMTS17 (ENSXMAG00000001177)	CERS3 (ENSXMAG00000001224)	ENSXMAG00000001272	asb7 (ENSXMAG00000001275)	aldh1a3 (ENSXMAG00000001303)	ENSXMAG00000001400	chsy1 (ENSXMAG00000001439)	selenos (ENSXMAG00000001446)	snrpa1 (ENSXMAG00000001455)	ENSXMAG00000001474
NAME_4	ANCESTRAL SPECIES	139			ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00940000158773	ENSGT01030000234515.a.b.a.b.a	ENSGT00390000001790	ENSGT00940000158068	ENSGT00940000158815	ENSGT00940000160363	ENSGT01050000244857.C.a.a	ENSGT00940000166109	ENSGT00940000153289.b	ENSGT00940000162219
Sheepshead minnow	MODERN SPECIES	1203														C19orf12 (ENSCVAG00000006969)	ENSCVAG00000006957	tph1b (ENSCVAG00000006915) #22	cd81a (ENSCVAG00000000680)	ENSCVAG00000006855	ANO9 (ENSCVAG00000006838)	ENSCVAG00000006756
Mummichog	MODERN SPECIES	2189		ENSFHEG00000018153	MMP15 (ENSFHEG00000018210)	dhcr7 (ENSFHEG00000018244)	ENSFHEG00000018296	ENSFHEG00000018579	DPY19L3 (ENSFHEG00000018664)	ZNF507 (ENSFHEG00000018679)	tshz3b (ENSFHEG00000018701)	ZNF536 (ENSFHEG00000018709)	ccne1 (ENSFHEG00000018737)	zgc:162297 (ENSFHEG00000018756)	si:ch211-260e23.9 (ENSFHEG00000018776)	si:ch211-260e23.8 (ENSFHEG00000000481)	AP2A2 (ENSFHEG00000018918)	tph1b (ENSFHEG00000018995) #22	cd81a (ENSFHEG00000019003)	PKP3 (ENSFHEG00000019014)	ANO9 (ENSFHEG00000019026)	ENSFHEG00000019045	shcbp1 (ENSFHEG00000019051)	ADAMTS17 (ENSFHEG00000019145)	CERS3 (ENSFHEG00000019171)	ENSFHEG00000019181	asb7 (ENSFHEG00000019192)	aldh1a3 (ENSFHEG00000019231)	LRRK1 (ENSFHEG00000019263)	chsy1 (ENSFHEG00000019282)	selenos (ENSFHEG00000019284)	snrpa1 (ENSFHEG00000000495)	ENSFHEG00000000584
Oryzias	ANCESTRAL SPECIES	13	ENSGT00390000015672	ENSGT00940000166567.c	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f.b	ENSGT00940000158300.f.a	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00950000182838.A.a.b	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572	ENSGT00940000160522.c.b
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00390000015672	ENSGT00940000166567.c	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f.a	ENSGT00390000003194.p.a.a.a	ENSGT00390000003194.p.b	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00950000182838.A.a.b	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572
Chinese medaka	MODERN SPECIES	22		ENSOSIG00000001574	MMP15 (ENSOSIG00000001788)	dhcr7 (ENSOSIG00000004593)	ENSOSIG00000004603	ENSOSIG00000004807	ENSOSIG00000004820	DPY19L3 (ENSOSIG00000004832)	ZNF507 (ENSOSIG00000004992)	tshz3b (ENSOSIG00000005002)	ZNF536 (ENSOSIG00000005011)	ccne1 (ENSOSIG00000005025)	zgc:162297 (ENSOSIG00000005032)	ENSOSIG00000005033	si:ch211-260e23.8 (ENSOSIG00000005034)	tph1b (ENSOSIG00000005044) #22	cd81a (ENSOSIG00000005336)	PKP3 (ENSOSIG00000005339)	ENSOSIG00000005341	ENSOSIG00000005344	ENSOSIG00000005345	ENSOSIG00000005347	ENSOSIG00000005348	ENSOSIG00000005350	ENSOSIG00000005354	spg21 (ENSOSIG00000005408)	AP2A2 (ENSOSIG00000005646)	gpn1 (ENSOSIG00000006505)	stmn4l (ENSOSIG00000006525)	il17a/f1 (ENSOSIG00000006527)	ENSOSIG00000006529
Japanese Medaka HdrR	MODERN SPECIES	17	dhcr7 (ENSORLG00000015429)	ENSORLG00000015441	ENSORLG00000030153	ENSORLG00000026674	ENSORLG00000028714	DPY19L3 (ENSORLG00000015460)	ENSORLG00000027920	ZNF507 (ENSORLG00000015469)	ENSORLG00000025580	tshz3b (ENSORLG00000015489)	ZNF536 (ENSORLG00000015493)	ccne1 (ENSORLG00000015511)	zgc:162297 (ENSORLG00000015518)	si:ch211-260e23.9 (ENSORLG00000030424)	si:ch211-260e23.8 (ENSORLG00000015522)	tph1b (ENSORLG00000015541) #22	cd81a (ENSORLG00000015561)	ENSORLG00000030430	PKP3 (ENSORLG00000023370)	ENSORLG00000026559	ENSORLG00000018673	ENSORLG00000024212	ENSORLG00000029031	ENSORLG00000021813	ENSORLG00000025792	ENSORLG00000026367	ENSORLG00000022144	ENSORLG00000022234	ENSORLG00000026785	ENSORLG00000018280	ENSORLG00000023776
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000166567.c	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00940000171971	ENSGT00390000009077.c.e	ENSGT00390000009077.c.f	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f.b.a	ENSGT00940000158300.f.a	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00950000182838.A.a.b	ENSGT01100000263556.a.b.a.a.a.b	ENSGT00950000183172.C	ENSGT01030000234597.a.b.a.a	ENSGT00940000156618.c.b	ENSGT01030000234838	ENSGT00940000157136.a	ENSGT00390000014572
Indian medaka	MODERN SPECIES	26	ENSOMEG00000020539	MMP15 (ENSOMEG00000020581)	dhcr7 (ENSOMEG00000020649)	ENSOMEG00000020794	ENSOMEG00000021135	ENSOMEG00000021173	DPY19L3 (ENSOMEG00000021380)	ZNF507 (ENSOMEG00000021403)	tshz3b (ENSOMEG00000021471)	ZNF536 (ENSOMEG00000021491)	ccne1 (ENSOMEG00000021519)	zgc:162297 (ENSOMEG00000021543)	ENSOMEG00000021527	C19orf12 (ENSOMEG00000021552)	C19orf12 (ENSOMEG00000021563)	tph1b (ENSOMEG00000021592) #22	ENSOMEG00000021609	cd81a (ENSOMEG00000021636)	PKP3 (ENSOMEG00000021668)	ENSOMEG00000021758	ENSOMEG00000021798	ENSOMEG00000021813	ENSOMEG00000021822	ENSOMEG00000021841	ENSOMEG00000021858	shcbp1 (ENSOMEG00000021893)	spg21 (ENSOMEG00000021924)	ENSOMEG00000021934	AP2A2 (ENSOMEG00000021958)	ENSOMEG00000021985	ENSOMEG00000021998
Javanese ricefish	MODERN SPECIES	17	ENSOJAG00000007691	MMP15 (ENSOJAG00000007724)	dhcr7 (ENSOJAG00000007829)	ENSOJAG00000007930	DPY19L3 (ENSOJAG00000008939)	ENSOJAG00000009106	ZNF507 (ENSOJAG00000009144)	tshz3b (ENSOJAG00000009182)	ZNF536 (ENSOJAG00000009193)	ENSOJAG00000009218	ccne1 (ENSOJAG00000009251)	zgc:162297 (ENSOJAG00000009303)	ENSOJAG00000009313	C19orf12 (ENSOJAG00000009329)	C19orf12 (ENSOJAG00000009337)	tph1b (ENSOJAG00000009345) #22	cd81a (ENSOJAG00000009393)	PKP3 (ENSOJAG00000009422)	ENSOJAG00000009450	ENSOJAG00000009548	ANO9 (ENSOJAG00000009558)	shcbp1 (ENSOJAG00000009642)	spg21 (ENSOJAG00000009782)	ENSOJAG00000010369	gpn1 (ENSOJAG00000010392)	STMN4 (ENSOJAG00000010725)	ENSOJAG00000010734	ENSOJAG00000010758	znf395a (ENSOJAG00000010775)	ENSOJAG00000010810	ENSOJAG00000010820
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000154170.B	ENSGT00530000063760.a	ENSGT00390000000954	ENSGT00940000159506	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b
Cichlidae	ANCESTRAL SPECIES	78									ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b	ENSGT00940000162226	ENSGT00940000167699	ENSGT01060000248726	ENSGT00390000005844.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	13							ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00940000178372.B	ENSGT00940000178372.A	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b	ENSGT00940000162226	ENSGT00940000167699	ENSGT01060000248726	ENSGT00390000005844.a.a
Nile tilapia	MODERN SPECIES			ENSONIG00000027492	ENSONIG00000035792	ENSONIG00000041401	tshz3b (ENSONIG00000003518)	ENSONIG00000034908	ZNF536 (ENSONIG00000003511)	ENSONIG00000027462	ccne1 (ENSONIG00000003504)	zgc:162297 (ENSONIG00000003502)	si:ch211-260e23.9 (ENSONIG00000028167)	si:ch211-260e23.8 (ENSONIG00000003499)	ENSONIG00000003498	ENSONIG00000023928	AP2A2 (ENSONIG00000003489)	tph1b (ENSONIG00000003476) #22	cd81a (ENSONIG00000003468)	PKP3 (ENSONIG00000003463)	PLEKHF1 (ENSONIG00000042684)	pop4 (ENSONIG00000003458)	tpcn2 (ENSONIG00000003453)	nadsyn1 (ENSONIG00000003446)	DOK4 (ENSONIG00000003443)	ccdc102a (ENSONIG00000003440)	txlng (ENSONIG00000003437)	rbb4l (ENSONIG00000003429)	HDGFL3 (ENSONIG00000041421)	TSSK2 (ENSONIG00000003428)	BNC1 (ENSONIG00000003425)	sh3gl3a (ENSONIG00000003418)	gjd6 (ENSONIG00000038518)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13							ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00940000178372.B	ENSGT00940000178372.A	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b	ENSGT00940000162226	ENSGT01090000260266	ENSGT00390000005844.a.a.l	ENSGT00940000157398.i.a
Haplochromini	ANCESTRAL SPECIES	11								ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00940000178372.C	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b	ENSGT00940000162226	ENSGT01090000260266	ENSGT00390000005844.a.a.l	ENSGT00940000157398.i.a
Haplochromini_A	ANCESTRAL SPECIES	10								ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00940000178372.C	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b	ENSGT00940000162226	ENSGT01090000260266	ENSGT00390000005844.a.a.l	ENSGT00940000157398.i.a
Haplochromini_B	ANCESTRAL SPECIES	3								ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00940000178372.C	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000160728.i	ENSGT00390000010067	ENSGT00940000159763	ENSGT00390000010152	ENSGT00940000160143	ENSGT00730000110960.b	ENSGT00940000155463	ENSGT00940000154748.A	ENSGT00940000153942.b	ENSGT00940000162226	ENSGT01090000260266	ENSGT00390000005844.a.a.l	ENSGT00940000157398.i.a
Eastern happy	MODERN SPECIES		ENSACLG00000001233	ENSACLG00000001162	NR2E3 (ENSACLG00000001100)	slc22a18 (ENSACLG00000001048)	tshz3b (ENSACLG00000000967)	ENSACLG00000000947	ENSACLG00000000933	ZNF536 (ENSACLG00000000897)	ccne1 (ENSACLG00000000839)	zgc:162297 (ENSACLG00000000821)	si:ch211-260e23.9 (ENSACLG00000000804)	C19orf12 (ENSACLG00000000798)	C19orf12 (ENSACLG00000000786)	ENSACLG00000000757	AP2A2 (ENSACLG00000000668)	tph1b (ENSACLG00000000631) #22	cd81a (ENSACLG00000000591)	PKP3 (ENSACLG00000000566)	PLEKHF1 (ENSACLG00000000563)	PLEKHF1 (ENSACLG00000000556)	pop4 (ENSACLG00000000526)	tpcn2 (ENSACLG00000000459)	nadsyn1 (ENSACLG00000000412)	DOK4 (ENSACLG00000000143)	ccdc102a (ENSACLG00000000106)	txlng (ENSACLG00000000094)	rbb4l (ENSACLG00000000073)	HDGFL3 (ENSACLG00000000030)	TSSK2 (ENSACLG00000025996)	ENSACLG00000025982	BNC1 (ENSACLG00000025966)
Zebra mbuna	MODERN SPECIES	1091	cebpg (ENSMZEG00005001888)	cebpa (ENSMZEG00005001908)	gpatch1 (ENSMZEG00005001926)	ENSMZEG00005001952	ENSMZEG00005001989	pthlha (ENSMZEG00005002015)	ZNF536 (ENSMZEG00005002030)	ENSMZEG00005002042	ccne1 (ENSMZEG00005002055)	zgc:162297 (ENSMZEG00005002110)	si:ch211-260e23.9 (ENSMZEG00005002115)	C19orf12 (ENSMZEG00005002123)	C19orf12 (ENSMZEG00005002134)	ENSMZEG00005002156	AP2A2 (ENSMZEG00005002184)	tph1b (ENSMZEG00005002263) #22	cd81a (ENSMZEG00005002299)	PKP3 (ENSMZEG00005002332)	PLEKHF1 (ENSMZEG00005002339)	PLEKHF1 (ENSMZEG00005002345)	pop4 (ENSMZEG00005002360)	tpcn2 (ENSMZEG00005002370)	nadsyn1 (ENSMZEG00005002498)	DOK4 (ENSMZEG00005002570)	ccdc102a (ENSMZEG00005002596)	TXLNG (ENSMZEG00005002622)	ENSMZEG00005002637	HDGFL3 (ENSMZEG00005002668)	TSSK2 (ENSMZEG00005002687)	ENSMZEG00005002702	BNC1 (ENSMZEG00005002713)
P. nyererei	MODERN SPECIES	314								tshz3b (ENSPNYG00000020351)	ZNF536 (ENSPNYG00000020319)	ccne1 (ENSPNYG00000020291)	zgc:162297 (ENSPNYG00000020263)	si:ch211-260e23.9 (ENSPNYG00000020257)	si:ch211-260e23.8 (ENSPNYG00000020247)	ENSPNYG00000020224	AP2A2 (ENSPNYG00000020149)	tph1b (ENSPNYG00000020110) #22	cd81a (ENSPNYG00000020075)	PKP3 (ENSPNYG00000020056)	PLEKHF1 (ENSPNYG00000020050)	pop4 (ENSPNYG00000020038)	tpcn2 (ENSPNYG00000020013)	nadsyn1 (ENSPNYG00000019946)	DOK4 (ENSPNYG00000019911)	ccdc102a (ENSPNYG00000019877)	txlng (ENSPNYG00000019867)	rbb4l (ENSPNYG00000019829)	HDGFL3 (ENSPNYG00000019804)	TSSK2 (ENSPNYG00000019774)	BNC1 (ENSPNYG00000019746)	sh3gl3a (ENSPNYG00000019692)	gjd6 (ENSPNYG00000019659)
Burton s mouthbrooder	MODERN SPECIES	330									ZNF536 (ENSHBUG00000021516)	ccne1 (ENSHBUG00000021565)	zgc:162297 (ENSHBUG00000021579)	si:ch211-260e23.9 (ENSHBUG00000021586)	si:ch211-260e23.8 (ENSHBUG00000021598)	ENSHBUG00000021626	AP2A2 (ENSHBUG00000021721)	tph1b (ENSHBUG00000021751) #22	cd81a (ENSHBUG00000021797)	PKP3 (ENSHBUG00000021814)	pop4 (ENSHBUG00000021821)	tpcn2 (ENSHBUG00000022121)	nadsyn1 (ENSHBUG00000022195)	DOK4 (ENSHBUG00000022220)	ccdc102a (ENSHBUG00000022253)	txlng (ENSHBUG00000022262)	rbb4l (ENSHBUG00000022301)	HDGFL3 (ENSHBUG00000022351)	TSSK2 (ENSHBUG00000022403)	ENSHBUG00000022425	BNC1 (ENSHBUG00000022436)	sh3gl3a (ENSHBUG00000022458)	gjd6 (ENSHBUG00000022474)
Lyretail cichlid	MODERN SPECIES	379						ENSNBRG00000001840	tshz3b (ENSNBRG00000001818)	ZNF536 (ENSNBRG00000001799)	ccne1 (ENSNBRG00000001765)	zgc:162297 (ENSNBRG00000001734)	si:ch211-260e23.9 (ENSNBRG00000001727)	si:ch211-260e23.8 (ENSNBRG00000001717)	ENSNBRG00000001705	ENSNBRG00000001697	AP2A2 (ENSNBRG00000001674)	TPH1 (ENSNBRG00000001647) #22	cd81a (ENSNBRG00000001623)	ENSNBRG00000001557	PLEKHF1 (ENSNBRG00000001544)	tpcn2 (ENSNBRG00000001332)	nadsyn1 (ENSNBRG00000001182)	DOK4 (ENSNBRG00000001153)	ccdc102a (ENSNBRG00000000998)	txlng (ENSNBRG00000000970)	rbb4l (ENSNBRG00000000923)	ENSNBRG00000000876	TSSK2 (ENSNBRG00000000850)	ENSNBRG00000000833	BNC1 (ENSNBRG00000000779)	sh3gl3a (ENSNBRG00000000741)	gjd6 (ENSNBRG00000000707)
Midas cichlid	MODERN SPECIES	198								tshz3b (ENSACIG00000009014)	ZNF536 (ENSACIG00000008978)	ccne1 (ENSACIG00000008891)	zgc:162297 (ENSACIG00000008870)	si:ch211-260e23.9 (ENSACIG00000008839)	si:ch211-260e23.8 (ENSACIG00000008828)	ENSACIG00000008820	AP2A2 (ENSACIG00000008771)	tph1b (ENSACIG00000008600) #22	cd81a (ENSACIG00000008503)	PKP3 (ENSACIG00000008437)	PLEKHF1 (ENSACIG00000008418)	PLEKHF1 (ENSACIG00000008413)	pop4 (ENSACIG00000008358)	tpcn2 (ENSACIG00000008273)	nadsyn1 (ENSACIG00000008223)	DOK4 (ENSACIG00000008205)
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000166567	ENSGT00940000154285.b.a.b	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00940000171378	ENSGT00940000166163	ENSGT00390000007857	ENSGT00390000017392	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00390000001014.`b.a	ENSGT00940000161356	ENSGT00940000157816.a.b	ENSGT00940000166897	ENSGT00940000161128
Eupercaria	ANCESTRAL SPECIES	18	ENSGT01040000240400.c.a.b.a.a.d.b	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00390000007315	ENSGT00390000009505	ENSGT00940000159061	ENSGT00390000017828	ENSGT00940000158970	ENSGT00390000013104	ENSGT00940000177138	ENSGT00940000163235.A.a.a.b	ENSGT00940000162219	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.l	ENSGT00960000186729	ENSGT00940000156076.a.b
Eupecaria_A	ANCESTRAL SPECIES	18	ENSGT01040000240400.c.a.b.a.a.d.b	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00390000007315	ENSGT00390000009505	ENSGT00940000159061	ENSGT00390000017828	ENSGT00940000158970	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.a.a.b.a.b	ENSGT01040000240607	ENSGT00940000163235.A.a.b.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000153289.b	ENSGT00940000166109
Eupecaria_B	ANCESTRAL SPECIES	18	ENSGT01040000240400.c.a.b.a.a.d.b	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00390000007315	ENSGT00390000009505	ENSGT00940000159061	ENSGT00390000017828	ENSGT00940000158970	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000162219	ENSGT00940000156076.a.a.a.b.a.b	ENSGT01040000240607	ENSGT00940000163235.A.a.b.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000153289.b
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT01040000240400.c.a.b.a.a.d.b	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00390000007315	ENSGT00390000009505	ENSGT00940000159061	ENSGT00390000017828	ENSGT00940000158970	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000162219	ENSGT00940000163235.A.a.b.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000153289.b	ENSGT00940000166109	ENSGT01050000244857.C.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	18	ENSGT01040000240400.c.a.b.a.a.d.b	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00390000007315	ENSGT00390000009505	ENSGT00940000159061	ENSGT00390000017828	ENSGT00940000158970	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.A.a.b.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000153289.b	ENSGT01100000263513.a.a.b.b.a.b	ENSGT00940000166109
European seabass	MODERN SPECIES	18	ENSDLAG00005008144	ENSDLAG00005008117	ENSDLAG00005034425	ENSDLAG00005008098	ENSDLAG00005007859	ENSDLAG00005007850	ENSDLAG00005007668	ENSDLAG00005019713	DPY19L3 (ENSDLAG00005019376)	ZNF507 (ENSDLAG00005019362)	tshz3b (ENSDLAG00005019359)	ZNF536 (ENSDLAG00005015583)	ccne1 (ENSDLAG00005015596)	zgc:162297 (ENSDLAG00005028843)	ENSDLAG00005027406	ENSDLAG00005016867 #22	ENSDLAG00005033807	ENSDLAG00005017822	ENSDLAG00005027591	ENSDLAG00005017888	ENSDLAG00005019258	ENSDLAG00005031087	tollip (ENSDLAG00005029302)	ENSDLAG00005019325	ENSDLAG00005026920	ENSDLAG00005028413	ENSDLAG00005013000	snrpa1 (ENSDLAG00005012904)	ENSDLAG00005012885	chsy1 (ENSDLAG00005012848)	LRRK1 (ENSDLAG00005011682)
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005022794	MMP15 (ENSLCRG00005022753)	dhcr7 (ENSLCRG00005022752)	ENSLCRG00005022743	ENSLCRG00005022736	DPY19L3 (ENSLCRG00005022697)	ZNF507 (ENSLCRG00005022692)	tshz3b (ENSLCRG00005022690)	ENSLCRG00005022689	ZNF536 (ENSLCRG00005022688)	ccne1 (ENSLCRG00005022686)	zgc:162297 (ENSLCRG00005022684)	si:ch211-260e23.9 (ENSLCRG00005022683)	si:ch211-260e23.8 (ENSLCRG00005022681)	AP2A2 (ENSLCRG00005022457)	tph1b (ENSLCRG00005022385) #22	cd81a (ENSLCRG00005022379)	PKP3 (ENSLCRG00005022377)	vps35 (ENSLCRG00005022374)	zgc:92818 (ENSLCRG00005022372)	gpt2 (ENSLCRG00005021777)	mtfmt (ENSLCRG00005021772)	celf1 (ENSLCRG00005021741)	tollip (ENSLCRG00005021739)	ENSLCRG00005021737	ENSLCRG00005021736	ENSLCRG00005021551	ENSLCRG00005021546	ENSLCRG00005021545	snrpa1 (ENSLCRG00005021543)	ENSLCRG00005021541
Gilthead seabream	MODERN SPECIES	18	ENSSAUG00010003704	ENSSAUG00010003822	ENSSAUG00010003824	ENSSAUG00010003837	DPY19L3 (ENSSAUG00010003886)	ZNF507 (ENSSAUG00010003938)	ENSSAUG00010003940	tshz3b (ENSSAUG00010003943)	ZNF536 (ENSSAUG00010003947)	ccne1 (ENSSAUG00010003955)	zgc:162297 (ENSSAUG00010003962)	si:ch211-260e23.9 (ENSSAUG00010003963)	C19orf12 (ENSSAUG00010003965)	AP2A2 (ENSSAUG00010003973)	ENSSAUG00010003990	tph1b (ENSSAUG00010004006) #22	cd81a (ENSSAUG00010005033)	ENSSAUG00010005034	vps35 (ENSSAUG00010005035)	zgc:92818 (ENSSAUG00010005036)	gpt2 (ENSSAUG00010005041)	mtfmt (ENSSAUG00010005157)	celf1 (ENSSAUG00010005164)	tollip (ENSSAUG00010005236)	ENSSAUG00010005367	ENSSAUG00010005378	ENSSAUG00010005386	ENSSAUG00010005390	ENSSAUG00010005406	snrpa1 (ENSSAUG00010005421)	selenos (ENSSAUG00010005430)
Perciformes	ANCESTRAL SPECIES	20	ENSGT00390000015672	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT01090000260003.a.a	ENSGT00940000157182.g.b	ENSGT00390000002105	ENSGT00940000161051.a.a.b.b.b.b.f	ENSGT00940000163716.c.a.a.b	ENSGT00940000161051.a.a.b.b.b.a	ENSGT00940000154856.A.a.c.a.b.a.b.d	ENSGT00390000000020.b	ENSGT00390000006876	ENSGT00530000063760.a	ENSGT00940000154170.B
Cottioidei	ANCESTRAL SPECIES	69	ENSGT00390000015672	ENSGT00940000166567	ENSGT00940000156939.e	ENSGT00390000000417.a.b	ENSGT00950000183156.b	ENSGT00940000164020.c	ENSGT00530000063023.A.a	ENSGT00490000043434	ENSGT00950000183051.b.a	ENSGT00940000156397.a.a	ENSGT00940000156256	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT00950000182838.A.a.b	ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b
Stickleback	MODERN SPECIES	614		mesd (ENSGACG00000012440)	TLNRD1 (ENSGACG00000012450)	IL16 (ENSGACG00000012452)	ENSGACG00000012461	STARD5 (ENSGACG00000012463)	TMC3 (ENSGACG00000012477)	EFL1 (ENSGACG00000012495)	mex3b (ENSGACG00000012530)	ADAMTS17 (ENSGACG00000012531)	ccne1 (ENSGACG00000012549)	zgc:162297 (ENSGACG00000012553)	ENSGACG00000012560	si:ch211-260e23.8 (ENSGACG00000012565)	AP2A2 (ENSGACG00000012573)	tph1b (ENSGACG00000012591) #22	cd81a (ENSGACG00000012626)	ENSGACG00000012655	PKP3 (ENSGACG00000012660)
Lumpfish	MODERN SPECIES	18	ENSCLMG00005001146	ankdd1a (ENSCLMG00005001147)	ENSCLMG00005001148	mtch2 (ENSCLMG00005001149)	ENSCLMG00005001151	ENSCLMG00005001152	ENSCLMG00005001153	ENSCLMG00005001154	ENSCLMG00005001156	ENSCLMG00005001157	ENSCLMG00005001158	ano1a (ENSCLMG00005001161)	zgc:153993 (ENSCLMG00005002333)	PKP3 (ENSCLMG00005002335)	cd81a (ENSCLMG00005002354)	TPH1 (ENSCLMG00005002366) #22	AP2A2 (ENSCLMG00005003326)	si:ch211-260e23.8 (ENSCLMG00005003333)	si:ch211-260e23.9 (ENSCLMG00005003334)	zgc:162297 (ENSCLMG00005003336)	ccne1 (ENSCLMG00005003338)	ZNF536 (ENSCLMG00005002943)	tshz3b (ENSCLMG00005002954)	ENSCLMG00005002957	ZNF507 (ENSCLMG00005002971)	DPY19L3 (ENSCLMG00005002985)	ENSCLMG00005003005	ENSCLMG00005003040	dhcr7 (ENSCLMG00005003186)	MMP15 (ENSCLMG00005003189)	zgc:101040 (ENSCLMG00005003191)
Perciformes_a	ANCESTRAL SPECIES	169																ENSGT00950000182885.A.a.e #22	ENSGT00940000158805.a	ENSGT00940000159515.c.b
Pike perch	MODERN SPECIES	423																tph1b (ENSSLUG00000019041) #22	cd81a (ENSSLUG00000019034)	PKP3 (ENSSLUG00000019027)	zgc:153993 (ENSSLUG00000019024)
Tiger tail seahorse	MODERN SPECIES	427													ENSHCOG00000008028	ENSHCOG00000008001	ENSHCOG00000007990	tph1b (ENSHCOG00000007983) #22	cd81a (ENSHCOG00000007962)	PKP3 (ENSHCOG00000007940)	mtfmt (ENSHCOG00000007762)	zgc:92818 (ENSHCOG00000007753)	vps35 (ENSHCOG00000007742)	celf1 (ENSHCOG00000000258)	ENSHCOG00000007706	ENSHCOG00000007664	ENSHCOG00000007351	ENSHCOG00000007345	ENSHCOG00000007336	tollip (ENSHCOG00000007329)	ENSHCOG00000007304	ENSHCOG00000007278	ctrb.3 (ENSHCOG00000007260)
Pinecone sodierfish	MODERN SPECIES	17	ENSMMDG00005002045	DOK4 (ENSMMDG00005002052)	ENSMMDG00005002083	nadsyn1 (ENSMMDG00005002098)	ENSMMDG00005002116	ENSMMDG00005002122	ENSMMDG00005002126	ENSMMDG00005002127	ENSMMDG00005002131	ENSMMDG00005002134	ENSMMDG00005002136	ENSMMDG00005002143	ENSMMDG00005002149	ENSMMDG00005002162	AP2A2 (ENSMMDG00005002186)	tph1b (ENSMMDG00005002235) #22	kcnc1a (ENSMMDG00005002317) #24	cd81a (ENSMMDG00005002324)	ENSMMDG00005002328	ENSMMDG00005002338	ANO9 (ENSMMDG00005002341)	ENSMMDG00005002343	gpt2 (ENSMMDG00005002353)	ENSMMDG00005002447	ENSMMDG00005002451	ENSMMDG00005002453	ENSMMDG00005002455	ENSMMDG00005002460	ENSMMDG00005002464	gnrhr2 (ENSMMDG00005002500)	ENSMMDG00005003516
Cod	MODERN SPECIES	5	ENSGMOG00000030829	ENSGMOG00000027767	ENSGMOG00000034158	ENSGMOG00000024769	ENSGMOG00000008141	ENSGMOG00000036681	ENSGMOG00000008135	ENSGMOG00000008134	ENSGMOG00000008131	ENSGMOG00000016076	ENSGMOG00000016102	hdc (ENSGMOG00000016050)	ENSGMOG00000031103	ENSGMOG00000016010	ENSGMOG00000000019	tph1b (ENSGMOG00000000022) #22	kcnc1a (ENSGMOG00000031054) #24	cd81a (ENSGMOG00000004521)	ENSGMOG00000024372	ENSGMOG00000036015	ENSGMOG00000005940	tssc4 (ENSGMOG00000029139)	ENSGMOG00000012968	ENSGMOG00000012961	ENSGMOG00000026442	ENSGMOG00000023894	ENSGMOG00000030531	ENSGMOG00000015851	ENSGMOG00000015836	ENSGMOG00000015824	ENSGMOG00000015783
Otomorpha	ANCESTRAL SPECIES	73	ENSGT00940000157461	ENSGT00940000155405	ENSGT00940000157691	ENSGT00940000156573	ENSGT00390000016607.a	ENSGT00940000164516.a	ENSGT00940000157602.e	ENSGT00940000164919.b	ENSGT00940000158898	ENSGT00950000183065.D	ENSGT00950000183065.A	ENSGT00940000154489.A.c	ENSGT00940000155047.bc	ENSGT00940000163854.b	ENSGT00730000111210	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00940000156586	ENSGT00940000161285.b	ENSGT00940000162248	ENSGT00940000157925
Otophysi	ANCESTRAL SPECIES	150	ENSGT00940000165890	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.b.j	ENSGT00940000157505	ENSGT00940000158440.g.a	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a	ENSGT01030000234519.e.b.j.b.b	ENSGT00940000158844.k	ENSGT00390000006043.o	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465.i	ENSGT00730000111210	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00390000018225.A	ENSGT00940000156586	ENSGT00940000161285.b	ENSGT00940000162248
Characiphysae	ANCESTRAL SPECIES	27	ENSGT00940000165890	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.b.j	ENSGT00940000157505	ENSGT00940000158440.g.a	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a	ENSGT01030000234519.e.b.j.b.b	ENSGT00940000158844.k	ENSGT00390000006043.o	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465.i	ENSGT00730000111210	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00390000018225.A	ENSGT00940000156586	ENSGT00940000161285.b	ENSGT00940000162248
Channel catfish	MODERN SPECIES	19	LCTL (ENSIPUG00000019586)	smad6a (ENSIPUG00000019564)	SMAD3 (ENSIPUG00000019525)	map2k5 (ENSIPUG00000019485)	skor1a (ENSIPUG00000019469)	PIAS1 (ENSIPUG00000019429)	ENSIPUG00000019422	uaca (ENSIPUG00000019360)	tle3b (ENSIPUG00000019127)	paqr5b (ENSIPUG00000019056)	Glce (ENSIPUG00000019029)	anp32a (ENSIPUG00000019014)	coro2b (ENSIPUG00000018930)	itga11 (ENSIPUG00000018854)	mns1 (ENSIPUG00000018825)	tph1b (ENSIPUG00000018783) #22	Kcnc1 (ENSIPUG00000018769) #24	cd81a (ENSIPUG00000018729)	PKP3 (ENSIPUG00000018677)	ENSIPUG00000018598	tssc4 (ENSIPUG00000018585)	ano5b (ENSIPUG00000018492)	slc17a6b (ENSIPUG00000018446)	GAS2 (ENSIPUG00000018414)	ENSIPUG00000018398	slc39a13 (ENSIPUG00000018377)	spi1b (ENSIPUG00000018350)	si:ch73-314g15.3 (ENSIPUG00000018318)	fshb (ENSIPUG00000018302)	arl14ep (ENSIPUG00000018296)	kcna4 (ENSIPUG00000018292)
Characiphysae_b	ANCESTRAL SPECIES	28	ENSGT00940000165890	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.b.j	ENSGT00940000157505	ENSGT00940000158440.h	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a	ENSGT01030000234519.e.b.j.b.b	ENSGT00940000158844.k	ENSGT00390000006043.o	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465.i	ENSGT00730000111210	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00390000018225.A	ENSGT00940000156586	ENSGT00940000161285.b	ENSGT00940000162248
Characoidei	ANCESTRAL SPECIES	24	ENSGT00940000165890	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.b.j	ENSGT00940000157505	ENSGT00940000158440.h	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a	ENSGT01030000234519.e.b.j.b.b	ENSGT00940000158844.k	ENSGT00390000006043.o	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465.i	ENSGT00730000111210	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00390000018225.A	ENSGT00940000156586	ENSGT00940000161285.b	ENSGT00940000162248
Red-bellied piranha	MODERN SPECIES	92	crybgx (ENSPNAG00000014505)	smad6a (ENSPNAG00000014514)	smad3a (ENSPNAG00000014544)	map2k5 (ENSPNAG00000014566)	ENSPNAG00000014587	PIAS1 (ENSPNAG00000003192)	ENSPNAG00000014629	UACA (ENSPNAG00000003210)	tle3b (ENSPNAG00000014802)	paqr5b (ENSPNAG00000003288)	glceb (ENSPNAG00000003298)	anp32a (ENSPNAG00000014867)	CORO2B (ENSPNAG00000014897)	itga11a (ENSPNAG00000003319)	mns1 (ENSPNAG00000003324)	tph1b (ENSPNAG00000014954) #22	kcnc1a (ENSPNAG00000014969) #24	cd81a (ENSPNAG00000015010)	PKP3 (ENSPNAG00000015030)	ANO9 (ENSPNAG00000015146)	tssc4 (ENSPNAG00000015157)	ano5b (ENSPNAG00000006464)	slc17a6b (ENSPNAG00000015263)	GAS2 (ENSPNAG00000015275)	ENSPNAG00000015286	slc39a13 (ENSPNAG00000015334)	spi1b (ENSPNAG00000015374)	si:ch73-314g15.3 (ENSPNAG00000015421)	arl14ep (ENSPNAG00000015437)	fshb (ENSPNAG00000015450)	KCNA4 (ENSPNAG00000015466)
Mexicana tetra	MODERN SPECIES	31								tle3b (ENSAMXG00000032101)	paqr5b (ENSAMXG00000040389)	ENSAMXG00000042427	glceb (ENSAMXG00000031074)	anp32a (ENSAMXG00000006129)	CORO2B (ENSAMXG00000006120)	itga11a (ENSAMXG00000006104)	mns1 (ENSAMXG00000006098)	tph1b (ENSAMXG00000037098) #22	kcnc1a (ENSAMXG00000006094) #24	cd81a (ENSAMXG00000042106)	PKP3 (ENSAMXG00000006089)	ANO9 (ENSAMXG00000006083)	cars1 (ENSAMXG00000006079)	ENSAMXG00000040193	mybpc3 (ENSAMXG00000006074)	lin7c (ENSAMXG00000006072)	bdnf (ENSAMXG00000041536)	kif18a (ENSAMXG00000006057)	ENSAMXG00000039173	mettl15 (ENSAMXG00000035601)	lgr4 (ENSAMXG00000006034)	KCNA4 (ENSAMXG00000006026)	fshb (ENSAMXG00000040442)
Electric eel	MODERN SPECIES	288														itga11a (ENSEEEG00000003292)	mns1 (ENSEEEG00000003296)	tph1b (ENSEEEG00000003299) #22	kcnc1a (ENSEEEG00000003300) #24	cd81a (ENSEEEG00000003307)	PKP3 (ENSEEEG00000003309)	ENSEEEG00000003312	ENSEEEG00000003314	ano5b (ENSEEEG00000003321)	slc17a6b (ENSEEEG00000003330)	GAS2 (ENSEEEG00000003331)	ENSEEEG00000003332	slc39a13 (ENSEEEG00000003333)	spi1b (ENSEEEG00000003334)	si:ch73-314g15.3 (ENSEEEG00000003335)	arl14ep (ENSEEEG00000003336)	fshb (ENSEEEG00000003338)	KCNA4 (ENSEEEG00000003339)
Cyprinoidei	ANCESTRAL SPECIES	3	ENSGT00940000153499.b.b.d.a.b.j	ENSGT00940000157505.d	ENSGT00940000158440.g.a	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a	ENSGT01030000234519.e.b.j.b.b	ENSGT00940000158844.k	ENSGT00390000006043.o	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689	ENSGT00940000155465.i	ENSGT00940000154757	ENSGT00940000163443.m.a	ENSGT00730000111210	ENSGT00950000182885.A.a.e #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a.c	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a	ENSGT00390000018225.A	ENSGT00940000156586.r	ENSGT00940000161285.b	ENSGT00940000162248
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	26	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a.d	ENSGT01030000234519.e.b.j.b.b.a	ENSGT00940000158844.k.a	ENSGT00390000006043.o.a	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689.eb.a	ENSGT00940000155465.i.b	ENSGT00940000154757.tb.b	ENSGT00940000158689.eb.b	ENSGT00940000155465.i.a	ENSGT00730000111210.e.a.a.a	ENSGT00940000154757.tb.a	ENSGT00940000163443.m.a.a	ENSGT00730000111210.e.b	ENSGT00950000182885.A.a.e.a #22	ENSGT00730000111210.e.a.b	ENSGT00950000182885.A.a.e.b #22	ENSGT00940000156912.c.a.e #24	ENSGT00940000158805.a.c.a	ENSGT00940000158805.a.d	ENSGT00940000159515.c.b.b	ENSGT00940000158300.f.i	ENSGT00390000011846.c	ENSGT00940000155692.j.e	ENSGT00940000155891.c.b.g	ENSGT00940000155755.a.b.a	ENSGT00390000015299.a.a.a.a	ENSGT00940000157349.ob.a	ENSGT00940000159754.a.a	ENSGT00390000018225.A
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	25	ENSCARG00000005865	ca7 (ENSCARG00000005850)	nae1 (ENSCARG00000070440)	ENSCARG00000070437	dync1li2 (ENSCARG00000070427)	cmtm4 (ENSCARG00000070411)	cmtm3 (ENSCARG00000070408)	ENSCARG00000070404	tk2 (ENSCARG00000070396)	ENSCARG00000070390	ENSCARG00000070387	cdh5 (ENSCARG00000070386)	ENSCARG00000070385	ENSCARG00000070384	mns1 (ENSCARG00000070382)	tph1b (ENSCARG00000070367) #22	kcnc1a (ENSCARG00000070359) #24	cd81a (ENSCARG00000070355)	PKP3 (ENSCARG00000070352)	ENSCARG00000070346	tssc4 (ENSCARG00000070343)	ano5b (ENSCARG00000070338)	slc17a6b (ENSCARG00000070297)	GAS2 (ENSCARG00000070295)	ENSCARG00000070294	slc39a13 (ENSCARG00000070293)	spi1b (ENSCARG00000070292)	arl14ep (ENSCARG00000070291)	gfGTHIbeta-2 (ENSCARG00000070289)	KCNA4 (ENSCARG00000070287)	lgr4 (ENSCARG00000070285)
Goldfish	MODERN SPECIES	1649																tph1b (ENSCARG00000034331) #22
Goldfish	MODERN SPECIES	25	GIGYF1 (ENSCARG00000052910)	fis1 (ENSCARG00000040876)	cldn15a (ENSCARG00000040864)	ENSCARG00000040854	PIAS1 (ENSCARG00000040731)	UACA (ENSCARG00000040575)	anp32a (ENSCARG00000040449)	CORO2B (ENSCARG00000038715)	paqr5b (ENSCARG00000038406)	glceb (ENSCARG00000038379)	anp32a (ENSCARG00000038207)	CORO2B (ENSCARG00000036888)	itga11a (ENSCARG00000036622)	ENSCARG00000036525	mns1 (ENSCARG00000036477)	ENSCARG00000036461 #22	smad3a (ENSCARG00000035926)	smad6a (ENSCARG00000035887)	crybgx (ENSCARG00000035878)	tipin (ENSCARG00000035645)	ENSCARG00000035631	fibinb (ENSCARG00000035622)	bbox1 (ENSCARG00000035601)	dennd2b (ENSCARG00000034680)	tmem9b (ENSCARG00000034625)	slc7a6os (ENSCARG00000034612)	slc7a6 (ENSCARG00000033512)	adgrg1 (ENSCARG00000033254)	DOK4 (ENSCARG00000033234)	ccdc102a (ENSCARG00000033213)	ENSCARG00000033197
Cyprininae_a	ANCESTRAL SPECIES	2	ENSGT00940000158146.a.b	ENSGT00940000153499.b.b.d.a.b.j.a	ENSGT00940000157505.d	ENSGT00940000158440.g.a.a	ENSGT01030000234539.a.a.b.a.b.a.a.b	ENSGT01030000234518.B.a.b.a.b.i	ENSGT00940000157475.s.a.c	ENSGT01030000234519.e.b.j.b.b.b	ENSGT00940000158844.k.b	ENSGT00390000006043.o.b	ENSGT00950000182907.a.b.b.b.k	ENSGT00940000158689.eb.a	ENSGT00940000155465.i.b	ENSGT00940000163443.m.a.a.a	ENSGT00730000111210.e.b	ENSGT00950000182885.A.a.e.a #22	ENSGT00940000156912.c.a.f #24	ENSGT00940000158805.a.c.b	ENSGT00940000159515.c.b.a	ENSGT00940000158300.f.j	ENSGT00390000011846.d	ENSGT00940000155692.j.f	ENSGT00940000155891.c.b.h	ENSGT00940000155755.a.b.b	ENSGT00390000015299.a.a.a.b	ENSGT00940000157349.ob.b.a	ENSGT00940000159754.a.b	ENSGT00940000156586.r.a	ENSGT00940000161285.b.a.b	ENSGT00940000156586.r.b	ENSGT00940000162248.d
Common carp reference	MODERN SPECIES	6	ENSCCRG00000074909	smad3a (ENSCCRG00000064022)	map2k5 (ENSCCRG00000079416)	skor1a (ENSCCRG00000016747)	PIAS1 (ENSCCRG00000074323)	ENSCCRG00000012448	ENSCCRG00000013336	tle3b (ENSCCRG00000013442)	paqr5b (ENSCCRG00000015743)	glceb (ENSCCRG00000039429)	anp32a (ENSCCRG00000057989)	CORO2B (ENSCCRG00000035947)	itga11a (ENSCCRG00000042314)	ENSCCRG00000032576	mns1 (ENSCCRG00000043422)	tph1b (ENSCCRG00000073694) #22	kcnc1a (ENSCCRG00000062348) #24	cd81a (ENSCCRG00000053775)	ENSCCRG00000023755	ENSCCRG00000025479	tssc4 (ENSCCRG00000058316)	ano5b (ENSCCRG00000013461)	slc17a6b (ENSCCRG00000042244)	GAS2 (ENSCCRG00000042230)	ENSCCRG00000069513	slc39a13 (ENSCCRG00000082859)	spi1b (ENSCCRG00000016682)	ENSCCRG00000016730	arl14ep (ENSCCRG00000016675)	fshb (ENSCCRG00000082746)	KCNA4 (ENSCCRG00000082204)
Golden-line barbel	MODERN SPECIES	463	smad6a (ENSSGRG00000035929)	smad3a (ENSSGRG00000035769)	map2k5 (ENSSGRG00000035763)	skor1a (ENSSGRG00000035761)	PIAS1 (ENSSGRG00000035745)	ENSSGRG00000035743	UACA (ENSSGRG00000035741)	tle3b (ENSSGRG00000035215)	paqr5b (ENSSGRG00000035203)	glceb (ENSSGRG00000035201)	anp32a (ENSSGRG00000035200)	CORO2B (ENSSGRG00000035199)	itga11a (ENSSGRG00000035197)	ENSSGRG00000035195	mns1 (ENSSGRG00000035193)	tph1b (ENSSGRG00000035188) #22	kcnc1a (ENSSGRG00000035187) #24	cd81a (ENSSGRG00000035186)	PKP3 (ENSSGRG00000035176)	ENSSGRG00000035175	ENSSGRG00000035174	ano5b (ENSSGRG00000035172)	slc17a6b (ENSSGRG00000035038)	GAS2 (ENSSGRG00000035037)	ENSSGRG00000035036	slc39a13 (ENSSGRG00000035034)	spi1b (ENSSGRG00000035029)	ENSSGRG00000035028	fshb (ENSSGRG00000035027)	KCNA4 (ENSSGRG00000035026)	lgr4 (ENSSGRG00000035025)
Cyprininae	ANCESTRAL SPECIES	26	ENSGT01030000234519.e.b.j.b.b.a	ENSGT00940000158844.k.a	ENSGT00390000006043.o.a	ENSGT00950000182907.a.b.b.b	ENSGT00940000158689.eb.a	ENSGT00940000155465.i.b	ENSGT00940000154757.tb.b	ENSGT00940000158689.eb.b	ENSGT00940000155465.i.a	ENSGT00730000111210.e.a.a.a	ENSGT00940000154757.tb.a	ENSGT00940000163443.m.a.a	ENSGT00730000111210.e.b	ENSGT00950000182885.A.a.e.a #22	ENSGT00730000111210.e.a.b	ENSGT00950000182885.A.a.e.b #22	ENSGT00940000156912.c.a.e #24	ENSGT00940000158805.a.c.a	ENSGT00940000158805.a.d	ENSGT00940000159515.c.b.b	ENSGT00940000158300.f.i	ENSGT00390000011846.c	ENSGT00940000155692.j.e	ENSGT00940000155891.c.b.g	ENSGT00940000155755.a.b.a	ENSGT00390000015299.a.a.a.a	ENSGT00940000157349.ob.a	ENSGT00940000159754.a.a	ENSGT00390000018225.A	ENSGT00940000156586.r.b	ENSGT00940000161285.b.a
Goldfish	MODERN SPECIES	47	crybgx (ENSCARG00000064411)	smad6a (ENSCARG00000064397)	smad3a (ENSCARG00000064036)	skor1a (ENSCARG00000064004)	PIAS1 (ENSCARG00000063946)	ENSCARG00000063913	UACA (ENSCARG00000063754)	tle3b (ENSCARG00000059297)	paqr5b (ENSCARG00000059047)	glceb (ENSCARG00000059036)	anp32a (ENSCARG00000058959)	CORO2B (ENSCARG00000058579)	itga11a (ENSCARG00000058212)	ENSCARG00000058026	mns1 (ENSCARG00000057934)	tph1b (ENSCARG00000057626) #22	kcnc1a (ENSCARG00000057523) #24	cd81a (ENSCARG00000057440)	PKP3 (ENSCARG00000057372)	ANO9 (ENSCARG00000057300)	ano5b (ENSCARG00000057097)	slc17a6b (ENSCARG00000056818)	GAS2 (ENSCARG00000056761)	ENSCARG00000056748	slc39a13 (ENSCARG00000056671)	spi1b (ENSCARG00000056617)	si:ch73-314g15.3 (ENSCARG00000056588)	arl14ep (ENSCARG00000056569)	cgba (ENSCARG00000056552)	KCNA4 (ENSCARG00000056543)	lgr4 (ENSCARG00000056464)
Cyprininae_a	ANCESTRAL SPECIES	77	ENSGT00940000157505.c	ENSGT00940000158440.g.a.b	ENSGT01030000234539.a.a.b.a.b.a.a.a	ENSGT01030000234534.B.a.b.a.b	ENSGT00940000157475.s.a.d	ENSGT01030000234519.e.b.j.b.b.a	ENSGT00940000158844.k.a	ENSGT00390000006043.o.a	ENSGT00950000182907.a.b.b.b.l	ENSGT00940000158689.eb.b	ENSGT00940000155465.i.a	ENSGT00730000111210.e.a.a.a	ENSGT00940000154757.tb.a	ENSGT00940000163443.m.a.a.b	ENSGT00730000111210.e.a.b	ENSGT00950000182885.A.a.e.b #22	ENSGT00940000156912.c.a.e #24	ENSGT00940000158805.a.c.a	ENSGT00940000158805.a.d	ENSGT00940000159515.c.b.b	ENSGT00940000158300.f.i	ENSGT00390000011846.c	ENSGT00940000155692.j.e	ENSGT00940000155891.c.b.g	ENSGT00940000155755.a.b.a	ENSGT00390000015299.a.a.a.a	ENSGT00940000157349.ob.a	ENSGT00940000159754.a.a
Common carp reference	MODERN SPECIES		skor1a (ENSCCRG00000000576)	PIAS1 (ENSCCRG00000070797)	ENSCCRG00000062231	ENSCCRG00000013370	tle3b (ENSCCRG00000030981)	paqr5b (ENSCCRG00000071186)	glceb (ENSCCRG00000046460)	anp32a (ENSCCRG00000070700)	CORO2B (ENSCCRG00000079311)	itga11a (ENSCCRG00000042656)	ENSCCRG00000060873	ENSCCRG00000065226	ENSCCRG00000042251	ENSCCRG00000019224	mns1 (ENSCCRG00000019207)	tph1b (ENSCCRG00000043464) #22	kcnc1a (ENSCCRG00000057581) #24	cd81a (ENSCCRG00000055455)	ENSCCRG00000041181	ENSCCRG00000041210	tssc4 (ENSCCRG00000071315)	ano5b (ENSCCRG00000042702)	slc17a6b (ENSCCRG00000067206)	GAS2 (ENSCCRG00000074422)	ENSCCRG00000076104	slc39a13 (ENSCCRG00000016709)	spi1b (ENSCCRG00000065814)	si:ch73-314g15.3 (ENSCCRG00000075488)	arl14ep (ENSCCRG00000065177)	KCNA4 (ENSCCRG00000069395)	lgr4 (ENSCCRG00000081461)
Golden-line barbel	MODERN SPECIES	614									tle3b (ENSSGRG00000023546)	paqr5b (ENSSGRG00000029062)	glceb (ENSSGRG00000029067)	anp32a (ENSSGRG00000029068)	CORO2B (ENSSGRG00000029079)	itga11a (ENSSGRG00000029154)	mns1 (ENSSGRG00000029155)	tph1b (ENSSGRG00000029163) #22	kcnc1a (ENSSGRG00000029383) #24	ENSSGRG00000029385	PKP3 (ENSSGRG00000029389)	ENSSGRG00000029391	tssc4 (ENSSGRG00000029393)	ano5b (ENSSGRG00000029406)	slc17a6b (ENSSGRG00000030193)	GAS2 (ENSSGRG00000030239)	ENSSGRG00000030243	slc39a13 (ENSSGRG00000030254)
Zebrafish	MODERN SPECIES	22	ENSDARG00000069028	UACA (ENSDARG00000060238)	tle3b (ENSDARG00000069006)	paqr5b (ENSDARG00000052688)	glceb (ENSDARG00000068981)	anp32a (ENSDARG00000006487)	CORO2B (ENSDARG00000079440)	itga11a (ENSDARG00000036086)	ITLN1 (ENSDARG00000095082)	ENSDARG00000105568	itln2 (ENSDARG00000036084)	ENSDARG00000093796	ENSDARG00000105598	zgc:153219 (ENSDARG00000054054)	mns1 (ENSDARG00000060169)	tph1b (ENSDARG00000036082) #22	kcnc1a (ENSDARG00000051852) #24	cd81a (ENSDARG00000036080)	PKP3 (ENSDARG00000079438)	ENSDARG00000079324	tssc4 (ENSDARG00000036144)	ano5b (ENSDARG00000036147)	slc17a6b (ENSDARG00000041150)	GAS2 (ENSDARG00000036152)	ENSDARG00000027394	slc39a13 (ENSDARG00000000442)	spi1b (ENSDARG00000000767)	si:ch73-314g15.3 (ENSDARG00000000423)	arl14ep (ENSDARG00000001210)	fshb (ENSDARG00000010841)	KCNA4 (ENSDARG00000078650)
Osteoglossocephalai	ANCESTRAL SPECIES	136	ENSGT00940000156120.b	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00390000004737.b.a ##21	ENSGT00940000155818	ENSGT00390000015066	ENSGT00390000013104	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912 #24	ENSGT00940000158805.a	ENSGT00940000159515	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692	ENSGT01030000234621.E	ENSGT00940000155891	ENSGT00390000005623	ENSGT01050000245471	ENSGT00940000155755.a.b	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257
Osteoglossiformes	ANCESTRAL SPECIES	382															ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000156912.b #24	ENSGT00940000158805.a.k	ENSGT00940000159515.a	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000155692.h	ENSGT00390000013180.n	ENSGT00940000156257	ENSGT00730000111696.a	ENSGT00940000160226.i
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	2	rplp2l (ENSSFOG00015032427)	ENSSFOG00015010390	syt7b (ENSSFOG00015010377)	sdhaf2 (ENSSFOG00015029361)	CPSF7 (ENSSFOG00015010288)	ENSSFOG00015010269	polr2l (ENSSFOG00015028825)	EPS8L2 (ENSSFOG00015010210)	TMEM80 (ENSSFOG00015010192)	DAGLA (ENSSFOG00015010097)	MYRF (ENSSFOG00015010032)	tmem258 (ENSSFOG00015010010)	ENSSFOG00015009977	ENSSFOG00015009766	saal1 (ENSSFOG00015009751) #21	tph1a (ENSSFOG00015009712) #22	KCNC1 (ENSSFOG00015009636) #24	cd81a (ENSSFOG00015009579)	PKP3 (ENSSFOG00015009543)	ANO9 (ENSSFOG00015009485)	tssc4 (ENSSFOG00015009447)	ENSSFOG00015009422	ENSSFOG00015009408	ENSSFOG00015025877	ANO3 (ENSSFOG00015009301)	cd59 (ENSSFOG00015025427)	syt13 (ENSSFOG00015026665)	ENSSFOG00015009222	znf408 (ENSSFOG00015009198)	f2 (ENSSFOG00015009140)	arhgap1 (ENSSFOG00015009089)
Asian bonytongue	MODERN SPECIES	20	ciao2a (ENSSFOG00015022901)	ENSSFOG00015022892	calml4a (ENSSFOG00015022886)	CLN6 (ENSSFOG00015022875)	ITGA11 (ENSSFOG00015022846)	ENSSFOG00015022842	ENSSFOG00015022833	ENSSFOG00015022715	ENSSFOG00015022813	ENSSFOG00015022806	ENSSFOG00015028926	ENSSFOG00015022819	ENSSFOG00015022671	ENSSFOG00015022644	AP2A2 (ENSSFOG00015022624)	tph1a (ENSSFOG00015022493) #22	ENSSFOG00015022456 #23	KCNC1 (ENSSFOG00015022445) #24	CD81 (ENSSFOG00015028056)	ENSSFOG00015032515	ENSSFOG00015028652	ENSSFOG00015032638	cat (ENSSFOG00015022381)	syt12 (ENSSFOG00015022363)	PEAK1 (ENSSFOG00015022333)	ENSSFOG00015022352	hmg20a (ENSSFOG00015022310)	LINGO1 (ENSSFOG00015024664)	CSPG4 (ENSSFOG00015022290)	snx33 (ENSSFOG00015026549)	snupn (ENSSFOG00015022264)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	517										ENSPKIG00000011891	ENSPKIG00000011863	ENSPKIG00000011820	ENSPKIG00000011798	ENSPKIG00000011773	ENSPKIG00000011683	tph1a (ENSPKIG00000011601) #22	ENSPKIG00000011561 #23	KCNC1 (ENSPKIG00000011518) #24	CD81 (ENSPKIG00000011457)	PKP3 (ENSPKIG00000011384)	sigirr (ENSPKIG00000011359)	ANO9 (ENSPKIG00000011312)
P. kingsleyae	MODERN SPECIES	488												ENSPKIG00000020500	ENSPKIG00000020474	ENSPKIG00000020436	saal1 (ENSPKIG00000020375) #21	TPH1 (ENSPKIG00000020326) #22	KCNC1 (ENSPKIG00000020310) #24	cd81a (ENSPKIG00000020289)	PKP3 (ENSPKIG00000020239)	ANO9 (ENSPKIG00000020172)	tssc4 (ENSPKIG00000020149)	ANO5 (ENSPKIG00000020120)	tmem258 (ENSPKIG00000020111)
Clupeocephala	ANCESTRAL SPECIES	69	ENSGT00940000156076.a.b	ENSGT00940000177923	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.a.a.a	ENSGT01040000240607	ENSGT00940000163235.A.a.b	ENSGT00940000156076.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E	ENSGT00940000164871.a.b	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT01050000245471	ENSGT00940000155891.d	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257
Euteleosteomorpha	ANCESTRAL SPECIES	1	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000177923	ENSGT00940000156076.a.a.a.a	ENSGT01040000240607	ENSGT00940000163235.A.a.b	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E	ENSGT00940000164871.a.b	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00940000159545	ENSGT00390000007623.d
Acanthomorphata	ANCESTRAL SPECIES	4	ENSGT01040000240558	ENSGT00940000156076.a.b	ENSGT01040000240607	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E	ENSGT00940000164871.a.b	ENSGT00940000164871.a.a	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00940000159545	ENSGT00390000007623.d
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00940000156076.a.b	ENSGT00940000177923	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.A.a.a.b	ENSGT00940000162219	ENSGT01040000240607	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E	ENSGT00940000164871.a.b	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00940000159545	ENSGT00390000007623.d
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT01040000240607	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000156076.b	ENSGT00940000177138	ENSGT00940000156076.a.b	ENSGT00390000013104	ENSGT00940000163235.A.a.a.b	ENSGT00940000177923	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00940000177138	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000162219	ENSGT01040000240607	ENSGT00940000163235.A.a.b.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000156076.a.a.a.b.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.b	ENSGT00940000156076.a.b	ENSGT00940000162219	ENSGT00940000156076.a.a.a.b.a.b	ENSGT01040000240607	ENSGT00940000163235.A.a.b.b	ENSGT00940000156076.a.a.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.b	ENSGT00940000156076.a.b	ENSGT00940000162219	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Carangaria	ANCESTRAL SPECIES	6	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000156076.b	ENSGT00940000162219	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Carangaria_A	ANCESTRAL SPECIES		ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000156076.b	ENSGT00940000162219	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Barramundi perch	MODERN SPECIES	155													ENSLCAG00010010609	ENSLCAG00010010576	saal1 (ENSLCAG00010010541) #21	tph1a (ENSLCAG00010010510) #22	kcnc1b (ENSLCAG00010010491) #24	SERGEF (ENSLCAG00010010480) #23	pkp3a (ENSLCAG00010010469)	sigirr (ENSLCAG00010010464)	ANO9 (ENSLCAG00010010449)	ENSLCAG00010010444	ANO5 (ENSLCAG00010010335)	ENSLCAG00010010281	SLC17A6 (ENSLCAG00010010087)	fancf (ENSLCAG00010010003)	GAS2 (ENSLCAG00010009996)	svip (ENSLCAG00010009992)	ANO3 (ENSLCAG00010009981)	FIBIN (ENSLCAG00010009977)	ENSLCAG00010009974
Seriola	ANCESTRAL SPECIES	5	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Greater amberjack	MODERN SPECIES	86	pgghg (ENSSDUG00000019501)	ENSSDUG00000019539	fth1b (ENSSDUG00000019563)	BEST1 (ENSSDUG00000019572)	RAB3IL1 (ENSSDUG00000019598)	ENSSDUG00000019630	hps5 (ENSSDUG00000019648)	gtf2h1 (ENSSDUG00000019703)	ENSSDUG00000019729	ENSSDUG00000019744	ENSSDUG00000019784	ENSSDUG00000019853	ENSSDUG00000019882	ENSSDUG00000019906	saal1 (ENSSDUG00000019949) #21	tph1a (ENSSDUG00000019972) #22	SERGEF (ENSSDUG00000019985) #23	kcnc1b (ENSSDUG00000020010) #24	cd81b (ENSSDUG00000020017)	pkp3a (ENSSDUG00000020035)	sigirr (ENSSDUG00000020044)	ANO9 (ENSSDUG00000020059)	ANO5 (ENSSDUG00000020094)	ENSSDUG00000020168	SLC17A6 (ENSSDUG00000020178)	fancf (ENSSDUG00000020199)	GAS2 (ENSSDUG00000020211)	svip (ENSSDUG00000020243)	ANO3 (ENSSDUG00000020265)	ENSSDUG00000020318	FIBIN (ENSSDUG00000020341)
Yellowtail amberjack	MODERN SPECIES	3044	ENSSLDG00000022666	pgghg (ENSSLDG00000022643)	ENSSLDG00000022566	fth1b (ENSSLDG00000022548)	BEST1 (ENSSLDG00000022534)	RAB3IL1 (ENSSLDG00000022490)	ENSSLDG00000022473	hps5 (ENSSLDG00000022443)	gtf2h1 (ENSSLDG00000022323)	ENSSLDG00000022305	ENSSLDG00000022286	ENSSLDG00000022037	ENSSLDG00000021967	ENSSLDG00000021957	saal1 (ENSSLDG00000021943) #21	tph1a (ENSSLDG00000021917) #22	SERGEF (ENSSLDG00000021900) #23	kcnc1b (ENSSLDG00000021885) #24	cd81b (ENSSLDG00000021865)	pkp3a (ENSSLDG00000021777)	sigirr (ENSSLDG00000021764)	ANO9 (ENSSLDG00000021734)	ANO5 (ENSSLDG00000021649)	ENSSLDG00000021635	SLC17A6 (ENSSLDG00000021608)	fancf (ENSSLDG00000021601)	GAS2 (ENSSLDG00000021565)	svip (ENSSLDG00000021556)	ANO3 (ENSSLDG00000021400)	FIBIN (ENSSLDG00000021378)	ENSSLDG00000021359
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00940000155040.a	ENSGT00940000157180.a	ENSGT00940000165631	ENSGT00940000166188	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000164871.a.b	ENSGT00940000163235.E.l	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257
Turbot	MODERN SPECIES	1	ENSSMAG00000013408	ENSSMAG00000013394	ENSSMAG00000030096	ENSSMAG00000013360	ENSSMAG00000013335	ENSSMAG00000013326	pgghg (ENSSMAG00000013294)	ENSSMAG00000013251	fth1b (ENSSMAG00000013209)	ENSSMAG00000013198	RAB3IL1 (ENSSMAG00000013165)	ENSSMAG00000013151	hps5 (ENSSMAG00000013038)	gtf2h1 (ENSSMAG00000012992)	saal1 (ENSSMAG00000012974) #21	tph1a (ENSSMAG00000012969) #22	SERGEF (ENSSMAG00000012920) #23	kcnc1b (ENSSMAG00000012903) #24	ENSSMAG00000012867	PKP3 (ENSSMAG00000012839)	ENSSMAG00000012811	ANO9 (ENSSMAG00000012716)	ANO5 (ENSSMAG00000012625)	ENSSMAG00000031896	ENSSMAG00000023172	ENSSMAG00000012613	SLC17A6 (ENSSMAG00000012578)	fancf (ENSSMAG00000012575)	GAS2 (ENSSMAG00000012516)	svip (ENSSMAG00000012556)	ANO3 (ENSSMAG00000012377)
Tongue sole	MODERN SPECIES	16	ints14 (ENSCSEG00000006667)	ppcdc (ENSCSEG00000006657)	ENSCSEG00000006651	ARIH1 (ENSCSEG00000006629)	stoml1 (ENSCSEG00000006621)	cyp11a1.1 (ENSCSEG00000006612)	ENSCSEG00000006602	stra6 (ENSCSEG00000006586)	islr2 (ENSCSEG00000006581)	sema7a (ENSCSEG00000006572)	commd4 (ENSCSEG00000006503)	neil1 (ENSCSEG00000006485)	hps5 (ENSCSEG00000006455)	gtf2h1 (ENSCSEG00000006431)	saal1 (ENSCSEG00000006419) #21	tph1a (ENSCSEG00000006405) #22	SERGEF (ENSCSEG00000006381) #23	kcnc1b (ENSCSEG00000006392) #24	cd81b (ENSCSEG00000006377)	pkp3a (ENSCSEG00000006367)	sigirr (ENSCSEG00000006361)	ANO9 (ENSCSEG00000006350)	ANO5 (ENSCSEG00000006310)	ENSCSEG00000006281	ENSCSEG00000006268	SLC17A6 (ENSCSEG00000006253)	fancf (ENSCSEG00000006252)	GAS2 (ENSCSEG00000006235)	svip (ENSCSEG00000006229)	ENSCSEG00000006227	PRC1 (ENSCSEG00000006211)
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00940000166188	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000004894	ENSMAMG00000004865	ENSMAMG00000004763	ENSMAMG00000004700	hps5 (ENSMAMG00000004508)	gtf2h1 (ENSMAMG00000004377)	ENSMAMG00000004317	ENSMAMG00000024464	ENSMAMG00000003946	ENSMAMG00000003834	ENSMAMG00000003724	ENSMAMG00000003691	ENSMAMG00000003671	ENSMAMG00000003641	saal1 (ENSMAMG00000003623) #21	tph1a (ENSMAMG00000003586) #22	SERGEF (ENSMAMG00000003569) #23	kcnc1b (ENSMAMG00000003549) #24	ENSMAMG00000027327	PKP3 (ENSMAMG00000003505)	ENSMAMG00000003477	ANO9 (ENSMAMG00000003449)	ANO5 (ENSMAMG00000003324)	ENSMAMG00000003293	SLC17A6 (ENSMAMG00000003250)	fancf (ENSMAMG00000003238)	GAS2 (ENSMAMG00000003216)	svip (ENSMAMG00000003201)	ANO3 (ENSMAMG00000003145)	ENSMAMG00000003134	ENSMAMG00000025866
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Climbing perch	MODERN SPECIES	19	pgghg (ENSATEG00000010929)	ENSATEG00000010946	fth1b (ENSATEG00000029370)	ENSATEG00000010979	ENSATEG00000027574	RAB3IL1 (ENSATEG00000011029)	ENSATEG00000011109	hps5 (ENSATEG00000011137)	gtf2h1 (ENSATEG00000011162)	ENSATEG00000011222	ENSATEG00000011368	ENSATEG00000011457	ENSATEG00000011592	ENSATEG00000011676	saal1 (ENSATEG00000011957) #21	tph1a (ENSATEG00000011970) #22	SERGEF (ENSATEG00000012005) #23	kcnc1b (ENSATEG00000012012) #24	ENSATEG00000012028	PKP3 (ENSATEG00000012035)	ENSATEG00000012047	ANO9 (ENSATEG00000012071)	ANO5 (ENSATEG00000012187)	SLC17A6 (ENSATEG00000012288)	fancf (ENSATEG00000012336)	GAS2 (ENSATEG00000012349)	svip (ENSATEG00000012385)	ANO3 (ENSATEG00000012392)	ENSATEG00000012462	ENSATEG00000012476	ENSATEG00000012493
Siamese fighting fish	MODERN SPECIES	17	hps5 (ENSBSLG00000000716)	gtf2h1 (ENSBSLG00000000741)	ENSBSLG00000000746	ENSBSLG00000000770	ENSBSLG00000000826	ENSBSLG00000000830	ENSBSLG00000000835	ENSBSLG00000000843	ENSBSLG00000000849	ENSBSLG00000000860	ENSBSLG00000000873	ENSBSLG00000000876	ENSBSLG00000000878	ENSBSLG00000000879	saal1 (ENSBSLG00000000883) #21	tph1a (ENSBSLG00000000938) #22	SERGEF (ENSBSLG00000001003) #23	kcnc1b (ENSBSLG00000001004) #24	cd81b (ENSBSLG00000001007)	pkp3a (ENSBSLG00000001272)	sigirr (ENSBSLG00000001370)	ANO9 (ENSBSLG00000001391)	ANO5 (ENSBSLG00000001457)	SLC17A6 (ENSBSLG00000001544)	fancf (ENSBSLG00000001957)	GAS2 (ENSBSLG00000002145)	svip (ENSBSLG00000002169)	ANO3 (ENSBSLG00000002469)	FIBIN (ENSBSLG00000003026)	ENSBSLG00000003027	SPI1 (ENSBSLG00000003030)
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000163235.A.a.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Tetraodontidae	ANCESTRAL SPECIES	11	ENSGT00940000157180.a	ENSGT00940000165631	ENSGT00940000166188	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000163235.A.a.a.a	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Tetraodon	MODERN SPECIES	4	ENSTNIG00000016077	ENSTNIG00000016078	PNPLA2 (ENSTNIG00000016079)	ENSTNIG00000016080	ENSTNIG00000016081	ENSTNIG00000016082	ENSTNIG00000016083	ENSTNIG00000016084	RAB3IL1 (ENSTNIG00000016085)	ENSTNIG00000006541	HPS5 (ENSTNIG00000006542)	gtf2h1 (ENSTNIG00000006535)	ENSTNIG00000003971	ENSTNIG00000004169	saal1 (ENSTNIG00000004168) #21	tph1a (ENSTNIG00000004167) #22	kcnc1b (ENSTNIG00000013677) #24	cd81b (ENSTNIG00000013678)	pkp3a (ENSTNIG00000013679)	sigirr (ENSTNIG00000013680)	ANO9 (ENSTNIG00000013681)	ANO5 (ENSTNIG00000013682)	ENSTNIG00000001186	GAS2 (ENSTNIG00000013683)	FIBIN (ENSTNIG00000013685)	ENSTNIG00000013686	SPI1 (ENSTNIG00000013687)	prc1a (ENSTNIG00000013688)	CLPX (ENSTNIG00000013689)	CYP19A1 (ENSTNIG00000013690)	AP4E1 (ENSTNIG00000013691)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000177138	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000162219	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Ballan wrasse	MODERN SPECIES	15	PNPLA2 (ENSLBEG00000019243)	ENSLBEG00000019180	pgghg (ENSLBEG00000019138)	ENSLBEG00000019083	fth1b (ENSLBEG00000019056)	BEST1 (ENSLBEG00000019025)	RAB3IL1 (ENSLBEG00000018990)	ENSLBEG00000018966	hps5 (ENSLBEG00000018944)	gtf2h1 (ENSLBEG00000018839)	ENSLBEG00000018818	ENSLBEG00000018590	ENSLBEG00000018472	ENSLBEG00000018272	saal1 (ENSLBEG00000018169) #21	tph1a (ENSLBEG00000018122) #22	SERGEF (ENSLBEG00000018086) #23	kcnc1b (ENSLBEG00000018052) #24	cd81b (ENSLBEG00000017926)	pkp3a (ENSLBEG00000017754)	sigirr (ENSLBEG00000017640)	ANO9 (ENSLBEG00000017535)	ANO5 (ENSLBEG00000017263)	SLC17A6 (ENSLBEG00000017149)	fancf (ENSLBEG00000017139)	GAS2 (ENSLBEG00000017105)	svip (ENSLBEG00000017068)	ANO3 (ENSLBEG00000016941)	FIBIN (ENSLBEG00000016886)	ENSLBEG00000016868	ENSLBEG00000016834
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b	ENSGT00390000009453.fb.a
European seabass	MODERN SPECIES	19	ENSDLAG00005011801	ENSDLAG00005031273	pgghg (ENSDLAG00005011841)	ENSDLAG00005011909	ENSDLAG00005011967	ENSDLAG00005012050	ENSDLAG00005012397	hps5 (ENSDLAG00005012487)	gtf2h1 (ENSDLAG00005012616)	ENSDLAG00005030315	ENSDLAG00005028911	ENSDLAG00005033118	ENSDLAG00005026487	ENSDLAG00005012819	saal1 (ENSDLAG00005013662) #21	tph1a (ENSDLAG00005013740) #22	SERGEF (ENSDLAG00005014096) #23	kcnc1b (ENSDLAG00005014118) #24	ENSDLAG00005014192	ENSDLAG00005014344	ANO5 (ENSDLAG00005014420)	SLC17A6 (ENSDLAG00005015502)	fancf (ENSDLAG00005016261)	GAS2 (ENSDLAG00005033063)	svip (ENSDLAG00005016338)	ANO3 (ENSDLAG00005016369)	ENSDLAG00005017235	ENSDLAG00005029625	ENSDLAG00005017293	ENSDLAG00005017850	ENSDLAG00005017876
Large yellow croaker	MODERN SPECIES	492	ENSLCRG00005006935	pgghg (ENSLCRG00005006933)	ENSLCRG00005006932	fth1b (ENSLCRG00005006931)	BEST1 (ENSLCRG00005006929)	RAB3IL1 (ENSLCRG00005006920)	ENSLCRG00005006918	hps5 (ENSLCRG00005006890)	gtf2h1 (ENSLCRG00005006845)	ENSLCRG00005006840	ENSLCRG00005006836	ENSLCRG00005006828	ENSLCRG00005006823	ENSLCRG00005006774	saal1 (ENSLCRG00005006753) #21	tph1a (ENSLCRG00005005723) #22	kcnc1b (ENSLCRG00005005701) #24	SERGEF (ENSLCRG00005005695) #23	pkp3a (ENSLCRG00005005692)	sigirr (ENSLCRG00005005687)	ANO9 (ENSLCRG00005005682)	ANO5 (ENSLCRG00005004035)	SLC17A6 (ENSLCRG00005001421)	fancf (ENSLCRG00005001396)	GAS2 (ENSLCRG00005001389)	svip (ENSLCRG00005023672)	ANO3 (ENSLCRG00005023668)	FIBIN (ENSLCRG00005023664)	ENSLCRG00005023662	ENSLCRG00005023661	PRC1 (ENSLCRG00005023657)
Gilthead seabream	MODERN SPECIES	22	ENSSAUG00010016460	PNPLA2 (ENSSAUG00010016463)	ENSSAUG00010016471	pgghg (ENSSAUG00010016478)	ENSSAUG00010016550	fth1b (ENSSAUG00010016551)	BEST1 (ENSSAUG00010016553)	RAB3IL1 (ENSSAUG00010016567)	ENSSAUG00010017186	hps5 (ENSSAUG00010017203)	gtf2h1 (ENSSAUG00010017232)	ENSSAUG00010017304	ENSSAUG00010017308	ENSSAUG00010017312	saal1 (ENSSAUG00010017313) #21	tph1a (ENSSAUG00010017316) #22	SERGEF (ENSSAUG00010004117) #23	kcnc1b (ENSSAUG00010004187) #24	cd81b (ENSSAUG00010004279)	pkp3a (ENSSAUG00010004294)	sigirr (ENSSAUG00010004310)	ANO9 (ENSSAUG00010004316)	ANO5 (ENSSAUG00010004419)	ENSSAUG00010006558	SLC17A6 (ENSSAUG00010006573)	fancf (ENSSAUG00010008178)	GAS2 (ENSSAUG00010008180)	svip (ENSSAUG00010008183)	ANO3 (ENSSAUG00010008201)	FIBIN (ENSSAUG00010009798)	ENSSAUG00010009800
Perciformes	ANCESTRAL SPECIES	7	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00940000165631	ENSGT00940000166188	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Lumpfish	MODERN SPECIES	21	ENSCLMG00005018520	ENSCLMG00005018519	PNPLA2 (ENSCLMG00005018516)	ENSCLMG00005018515	pgghg (ENSCLMG00005018507)	ENSCLMG00005018505	fth1b (ENSCLMG00005018504)	BEST1 (ENSCLMG00005018503)	RAB3IL1 (ENSCLMG00005018490)	ENSCLMG00005018485	hps5 (ENSCLMG00005018475)	gtf2h1 (ENSCLMG00005018455)	ENSCLMG00005018341	ENSCLMG00005018326	saal1 (ENSCLMG00005018270) #21	tph1a (ENSCLMG00005018266) #22	SERGEF (ENSCLMG00005018265) #23	kcnc1b (ENSCLMG00005018264) #24	cd81b (ENSCLMG00005018263)	pkp3a (ENSCLMG00005018260)	sigirr (ENSCLMG00005018256)	ANO9 (ENSCLMG00005018252)	ANO5 (ENSCLMG00005017834)	ENSCLMG00005017807	SLC17A6 (ENSCLMG00005017667)	fancf (ENSCLMG00005017662)	GAS2 (ENSCLMG00005017659)	svip (ENSCLMG00005017657)	ANO3 (ENSCLMG00005017654)	FIBIN (ENSCLMG00005017652)	ENSCLMG00005017651
Stickleback	MODERN SPECIES	14	ENSGACG00000005509	ENSGACG00000005514	PNPLA2 (ENSGACG00000005521)	ENSGACG00000005541	pgghg (ENSGACG00000005561)	ENSGACG00000005590	BEST1 (ENSGACG00000005607)	ENSGACG00000005609	RAB3IL1 (ENSGACG00000005613)	ENSGACG00000005618	hps5 (ENSGACG00000005632)	gtf2h1 (ENSGACG00000005659)	ENSGACG00000005709	ENSGACG00000005733	saal1 (ENSGACG00000005737) #21	tph1a (ENSGACG00000005752) #22	SERGEF (ENSGACG00000005794) #23	kcnc1b (ENSGACG00000005806) #24	cd81b (ENSGACG00000005809)	pkp3a (ENSGACG00000005842)	sigirr (ENSGACG00000005853)	ANO9 (ENSGACG00000005868)	ANO5 (ENSGACG00000005889)	ENSGACG00000005898	SLC17A6 (ENSGACG00000005899)	fancf (ENSGACG00000005906)	GAS2 (ENSGACG00000005909)	ANO3 (ENSGACG00000005915)	FIBIN (ENSGACG00000005940)	ENSGACG00000005942	ENSGACG00000005950
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Channel bull blenny	MODERN SPECIES	20	ENSCGOG00000021798	pgghg (ENSCGOG00000021805)	ENSCGOG00000021867	fth1b (ENSCGOG00000021870)	BEST1 (ENSCGOG00000003680)	RAB3IL1 (ENSCGOG00000003687)	ENSCGOG00000003713	hps5 (ENSCGOG00000003730)	gtf2h1 (ENSCGOG00000003846)	ENSCGOG00000004885	ENSCGOG00000004898	ENSCGOG00000004934	ENSCGOG00000004945	ENSCGOG00000004951	saal1 (ENSCGOG00000004958) #21	tph1a (ENSCGOG00000005123) #22	SERGEF (ENSCGOG00000007473) #23	kcnc1b (ENSCGOG00000007474) #24	cd81b (ENSCGOG00000007476)	pkp3a (ENSCGOG00000007479)	sigirr (ENSCGOG00000007487)	ANO9 (ENSCGOG00000007488)	ANO5 (ENSCGOG00000007511)	ENSCGOG00000009481	SLC17A6 (ENSCGOG00000009505)	fancf (ENSCGOG00000010059)	GAS2 (ENSCGOG00000010062)	svip (ENSCGOG00000010065)	ANO3 (ENSCGOG00000010069)	FIBIN (ENSCGOG00000010106)	ENSCGOG00000010110
Pike perch	MODERN SPECIES	6	pgghg (ENSSLUG00000001809)	ENSSLUG00000001992	fth1b (ENSSLUG00000001996)	ENSSLUG00000002000	RAB3IL1 (ENSSLUG00000002048)	hps5 (ENSSLUG00000002387)	gtf2h1 (ENSSLUG00000002442)	ENSSLUG00000002480	ENSSLUG00000002485	ENSSLUG00000002504	ENSSLUG00000002543	ENSSLUG00000002559	ENSSLUG00000002573	ENSSLUG00000002647	saal1 (ENSSLUG00000002689) #21	tph1a (ENSSLUG00000002699) #22	SERGEF (ENSSLUG00000002716) #23	kcnc1b (ENSSLUG00000002734) #24	cd81b (ENSSLUG00000002761)	pkp3a (ENSSLUG00000002773)	sigirr (ENSSLUG00000002795)	ANO9 (ENSSLUG00000002805)	ANO5 (ENSSLUG00000003089)	SLC17A6 (ENSSLUG00000005778)	fancf (ENSSLUG00000007343)	GAS2 (ENSSLUG00000007347)	svip (ENSSLUG00000007363)	ANO3 (ENSSLUG00000007408)	FIBIN (ENSSLUG00000007668)	ENSSLUG00000007670	ENSSLUG00000007676
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00940000177138	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000162219	ENSGT01040000240607	ENSGT00940000163235.A.a.b.a.a	ENSGT00940000156076.a.a.a.a	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000177923	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Oryzias	ANCESTRAL SPECIES	16	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000164871.a.b.p	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b.o.a	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000164871.a.b.p	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b.o.a	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Javanese ricefish	MODERN SPECIES	20	ENSOJAG00000005040	ENSOJAG00000005016	PNPLA2 (ENSOJAG00000004725)	ENSOJAG00000004636	pgghg (ENSOJAG00000004557)	ENSOJAG00000004501	fth1b (ENSOJAG00000004457)	BEST1 (ENSOJAG00000004181)	RAB3IL1 (ENSOJAG00000003799)	ENSOJAG00000003739	gtf2h1 (ENSOJAG00000003502)	ENSOJAG00000003076	ENSOJAG00000002893	ENSOJAG00000002838	saal1 (ENSOJAG00000002813) #21	tph1a (ENSOJAG00000001909) #22	SERGEF (ENSOJAG00000001558) #23	kcnc1b (ENSOJAG00000001548) #24	cd81b (ENSOJAG00000001544)	pkp3a (ENSOJAG00000001534)	sigirr (ENSOJAG00000001523)	ANO9 (ENSOJAG00000001487)	ANO5 (ENSOJAG00000001137)	SLC17A6 (ENSOJAG00000000833)	fancf (ENSOJAG00000000780)	GAS2 (ENSOJAG00000000776)	svip (ENSOJAG00000000765)	ANO3 (ENSOJAG00000000620)	FIBIN (ENSOJAG00000000593)	ENSOJAG00000000589	ENSOJAG00000000577
Indian medaka	MODERN SPECIES	15	ENSOMEG00000018103	fth1b (ENSOMEG00000018044)	BEST1 (ENSOMEG00000018027)	RAB3IL1 (ENSOMEG00000018003)	ENSOMEG00000017981	hps5 (ENSOMEG00000017963)	gtf2h1 (ENSOMEG00000017904)	saal1 (ENSOMEG00000017832) #21	ENSOMEG00000017684	ENSOMEG00000017607	ENSOMEG00000017597	ENSOMEG00000017576	ENSOMEG00000017524	ENSOMEG00000017430	ENSOMEG00000017341	tph1a (ENSOMEG00000017182) #22	SERGEF (ENSOMEG00000017163) #23	kcnc1b (ENSOMEG00000017103) #24	cd81b (ENSOMEG00000017063)	pkp3a (ENSOMEG00000017023)	sigirr (ENSOMEG00000016997)	ANO9 (ENSOMEG00000016951)	ANO5 (ENSOMEG00000016852)	SLC17A6 (ENSOMEG00000016760)	fancf (ENSOMEG00000016724)	GAS2 (ENSOMEG00000016710)	svip (ENSOMEG00000016678)	ANO3 (ENSOMEG00000016644)	ENSOMEG00000016520	ENSOMEG00000016500	ENSOMEG00000016481
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000164871.a.b.p	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b.o.a	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Chinese medaka	MODERN SPECIES	766	pgghg (ENSOSIG00000011895)	ENSOSIG00000011900	fth1b (ENSOSIG00000011901)	BEST1 (ENSOSIG00000011905)	RAB3IL1 (ENSOSIG00000011916)	ENSOSIG00000011936	hps5 (ENSOSIG00000011942)	ENSOSIG00000011956	gtf2h1 (ENSOSIG00000011957)	ENSOSIG00000011977	ENSOSIG00000012062	ENSOSIG00000012064	ENSOSIG00000012068	saal1 (ENSOSIG00000012070) #21	kcnc1b (ENSOSIG00000012072) #24	tph1a (ENSOSIG00000012093) #22	SERGEF (ENSOSIG00000013694) #23	cd81b (ENSOSIG00000013698)	PKP3 (ENSOSIG00000013700)	sigirr (ENSOSIG00000013706)	ANO9 (ENSOSIG00000013714)	ANO5 (ENSOSIG00000013753)	SLC17A6 (ENSOSIG00000014151)	fancf (ENSOSIG00000014289)	GAS2 (ENSOSIG00000014291)	svip (ENSOSIG00000014294)	ANO3 (ENSOSIG00000014301)	FIBIN (ENSOSIG00000014460)	ENSOSIG00000014461	ENSOSIG00000014463	prc1a (ENSOSIG00000014465)
Japanese Medaka HdrR	MODERN SPECIES	20	incenp (ENSORLG00000006173)	fth1b (ENSORLG00000006156)	BEST1 (ENSORLG00000006137)	RAB3IL1 (ENSORLG00000006127)	ENSORLG00000006117	hps5 (ENSORLG00000006094)	gtf2h1 (ENSORLG00000006073)	ENSORLG00000006050	ENSORLG00000022791	ENSORLG00000030306	ENSORLG00000029805	ENSORLG00000027567	ENSORLG00000006006	ENSORLG00000005986	saal1 (ENSORLG00000005979) #21	tph1a (ENSORLG00000005962) #22	SERGEF (ENSORLG00000005940) #23	kcnc1b (ENSORLG00000005924) #24	cd81b (ENSORLG00000005912)	PKP3 (ENSORLG00000005902)	sigirr (ENSORLG00000005890)	ANO9 (ENSORLG00000005868)	ANO5 (ENSORLG00000005844)	SLC17A6 (ENSORLG00000005791)	fancf (ENSORLG00000005752)	GAS2 (ENSORLG00000005747)	svip (ENSORLG00000021919)	ANO3 (ENSORLG00000005723)	ENSORLG00000005683	ENSORLG00000005677	ENSORLG00000005668
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000177923	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000177923	ENSGT00940000156076.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT01040000240607	ENSGT00940000164871.a.a.d	ENSGT00940000163235.E.k.a.c.a	ENSGT00940000164871.a.a.c	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Poecilia	ANCESTRAL SPECIES	5	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT01040000240607	ENSGT00940000164871.a.a.d	ENSGT00940000163235.E.k.a.c.a	ENSGT00940000163235.E.k.a.c.b	ENSGT00940000164871.a.a.c	ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
NAME_6	ANCESTRAL SPECIES	138														ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Sailfin molly	MODERN SPECIES	253														ENSPLAG00000008898	saal1 (ENSPLAG00000008913) #21	tph1a (ENSPLAG00000008937) #22	SERGEF (ENSPLAG00000008950) #23	kcnc1b (ENSPLAG00000008961) #24	cd81b (ENSPLAG00000008981)	PKP3 (ENSPLAG00000009090)	sigirr (ENSPLAG00000009105)	ANO9 (ENSPLAG00000009157)	ANO5 (ENSPLAG00000009212)	SLC17A6 (ENSPLAG00000009256)	fancf (ENSPLAG00000009270)	GAS2 (ENSPLAG00000009310)	svip (ENSPLAG00000000205)	ANO3 (ENSPLAG00000009388)	ENSPLAG00000009415	ENSPLAG00000009425	SPI1 (ENSPLAG00000009444)
Amazon molly	MODERN SPECIES	733														ENSPFOG00000019649	saal1 (ENSPFOG00000019648) #21	tph1a (ENSPFOG00000024080) #22	SERGEF (ENSPFOG00000023660) #23	kcnc1b (ENSPFOG00000019647) #24	cd81b (ENSPFOG00000019646)	PKP3 (ENSPFOG00000019645)	sigirr (ENSPFOG00000023364)	ANO9 (ENSPFOG00000019644)	ANO5 (ENSPFOG00000019643)	SLC17A6 (ENSPFOG00000019642)	fancf (ENSPFOG00000020580)	GAS2 (ENSPFOG00000019641)	svip (ENSPFOG00000019640)	ANO3 (ENSPFOG00000019639)	FIBIN (ENSPFOG00000020579)	ENSPFOG00000019638	SPI1 (ENSPFOG00000019637)
Guppy	MODERN SPECIES	458	ENSPREG00000013375	hps5 (ENSPREG00000013391)	gtf2h1 (ENSPREG00000013423)	ENSPREG00000013513	ENSPREG00000013527	ENSPREG00000013541	ENSPREG00000013556	ENSPREG00000013563	ENSPREG00000013572	ENSPREG00000013590	ENSPREG00000013613	ENSPREG00000013632	ENSPREG00000013663	ENSPREG00000013705	saal1 (ENSPREG00000013721) #21	tph1a (ENSPREG00000013736) #22	SERGEF (ENSPREG00000013762) #23	kcnc1b (ENSPREG00000013809) #24	cd81b (ENSPREG00000013839)	PKP3 (ENSPREG00000014036)	sigirr (ENSPREG00000014090)	ANO9 (ENSPREG00000014103)	ANO5 (ENSPREG00000014137)	SLC17A6 (ENSPREG00000014170)	fancf (ENSPREG00000014199)	GAS2 (ENSPREG00000014212)	svip (ENSPREG00000014226)	ANO3 (ENSPREG00000014250)	FIBIN (ENSPREG00000014305)	ENSPREG00000014309	SPI1 (ENSPREG00000014317)
Platyfish	MODERN SPECIES	11	ENSXMAG00000003943	hps5 (ENSXMAG00000003966)	gtf2h1 (ENSXMAG00000003986)	ENSXMAG00000028355	ENSXMAG00000029169	ENSXMAG00000021520	ENSXMAG00000025177	ENSXMAG00000008618	ENSXMAG00000022065	ENSXMAG00000004005	ENSXMAG00000026159	ENSXMAG00000027944	ENSXMAG00000022085	ENSXMAG00000007147	saal1 (ENSXMAG00000007130) #21	tph1a (ENSXMAG00000007103) #22	SERGEF (ENSXMAG00000007093) #23	kcnc1b (ENSXMAG00000007088) #24	cd81b (ENSXMAG00000007080)	PKP3 (ENSXMAG00000007072)	sigirr (ENSXMAG00000022432)	ANO9 (ENSXMAG00000007047)	ANO5 (ENSXMAG00000007021)	SLC17A6 (ENSXMAG00000006985)	fancf (ENSXMAG00000020217)	GAS2 (ENSXMAG00000021692)	svip (ENSXMAG00000023252)	ANO3 (ENSXMAG00000006916)	ENSXMAG00000022261	ENSXMAG00000023075	SPI1 (ENSXMAG00000006900)
NAME_4	ANCESTRAL SPECIES	26													ENSGT00940000163235.E.k.b	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Mummichog	MODERN SPECIES	2447														ENSFHEG00000012253	saal1 (ENSFHEG00000012225) #21	tph1a (ENSFHEG00000012213) #22	SERGEF (ENSFHEG00000012168) #23	kcnc1b (ENSFHEG00000012153) #24	cd81b (ENSFHEG00000012132)	pkp3a (ENSFHEG00000012104)	sigirr (ENSFHEG00000011951)	ANO9 (ENSFHEG00000011927)	ANO5 (ENSFHEG00000011855)	SLC17A6 (ENSFHEG00000011794)	fancf (ENSFHEG00000011756)	GAS2 (ENSFHEG00000011748)	svip (ENSFHEG00000011696)	ANO3 (ENSFHEG00000011686)	ENSFHEG00000011603	ENSFHEG00000011588	SPI1 (ENSFHEG00000011565)
Sheepshead minnow	MODERN SPECIES	1609													ENSCVAG00000005318	ENSCVAG00000005508	saal1 (ENSCVAG00000005524) #21	tph1a (ENSCVAG00000005576) #22
Aplocheiloidei	ANCESTRAL SPECIES	1	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000162219	ENSGT00940000164871.a.a	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b	ENSGT00940000159754.b
Turquoise killifish	MODERN SPECIES	1622	ENSNFUG00015005102	PIDD (ENSNFUG00015004987)	PNPLA2 (ENSNFUG00015004933)	CABZ01068600.1 (ENSNFUG00015024698)	ENSNFUG00015024687	FTH1A (ENSNFUG00015024686)	BEST1 (ENSNFUG00015024680)	RAB3IL1 (ENSNFUG00015024652)	ENSNFUG00015024643	hps5 (ENSNFUG00015024631)	gtf2h1 (ENSNFUG00015024618)	ENSNFUG00015024588	ENSNFUG00015024574	ENSNFUG00015024307	saal1 (ENSNFUG00015024261) #21	TPH1A (ENSNFUG00015024208) #22	SERGEF (ENSNFUG00015024194) #23	kcnc1b (ENSNFUG00015024189) #24	CD81 (ENSNFUG00015024185)	pkp3a (ENSNFUG00015024184)	sigirr (ENSNFUG00015024180)	ANO9A (ENSNFUG00015024171)	ANO5 (ENSNFUG00015024140)	SLC17A6A (ENSNFUG00015024055)	ENSNFUG00015024048	FANCF (ENSNFUG00015024046)	GAS2 (ENSNFUG00015024042)	svip (ENSNFUG00015024038)	ENSNFUG00015024036	ANO3 (ENSNFUG00015023975)	FP102071.1 (ENSNFUG00015023957)
Mangrove rivulus	MODERN SPECIES	6	ENSKMAG00000020985	fth1b (ENSKMAG00000021004)	BEST1 (ENSKMAG00000021017)	RAB3IL1 (ENSKMAG00000021043)	ENSKMAG00000021060	hps5 (ENSKMAG00000021080)	gtf2h1 (ENSKMAG00000021121)	ENSKMAG00000021131	ENSKMAG00000021138	ENSKMAG00000021144	ENSKMAG00000021170	ENSKMAG00000021226	ENSKMAG00000021254	ENSKMAG00000021269	saal1 (ENSKMAG00000021323) #21	tph1a (ENSKMAG00000021337) #22	SERGEF (ENSKMAG00000021358) #23	kcnc1b (ENSKMAG00000021372) #24	cd81b (ENSKMAG00000021379)	pkp3a (ENSKMAG00000021387)	sigirr (ENSKMAG00000021399)	ANO9 (ENSKMAG00000021409)	ANO5 (ENSKMAG00000021434)	SLC17A6 (ENSKMAG00000021470)	fancf (ENSKMAG00000021484)	GAS2 (ENSKMAG00000021490)	svip (ENSKMAG00000021506)	ANO3 (ENSKMAG00000021521)	FIBIN (ENSKMAG00000021539)	ENSKMAG00000021542	SPI1 (ENSKMAG00000021548)
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000177923	ENSGT00940000177138	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.A.a.a.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.E.k.a	ENSGT00940000164871.a.a.f.b	ENSGT00940000164871.a.a.f.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000164871.a.a.f.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Haplochromini	ANCESTRAL SPECIES		ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000163235.A.a.a.a	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000164871.a.a.f.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Burton s mouthbrooder	MODERN SPECIES	728													ENSHBUG00000010448	ENSHBUG00000010487	saal1 (ENSHBUG00000010492) #21	tph1a (ENSHBUG00000010549) #22	SERGEF (ENSHBUG00000010567) #23	kcnc1b (ENSHBUG00000010585) #24	cd81b (ENSHBUG00000010598)	pkp3a (ENSHBUG00000000279)	sigirr (ENSHBUG00000010637)	ENSHBUG00000000281	ANO5 (ENSHBUG00000010767)	ENSHBUG00000010789	SLC17A6 (ENSHBUG00000000289)	fancf (ENSHBUG00000010830)	GAS2 (ENSHBUG00000010884)	svip (ENSHBUG00000010923)	ANO3 (ENSHBUG00000011036)	FIBIN (ENSHBUG00000011055)	ENSHBUG00000011077
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000164871.a.a.f.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Haplochromini_B	ANCESTRAL SPECIES	96												ENSGT00940000164871.a.a.f.a	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Eastern happy	MODERN SPECIES	19	RAB3IL1 (ENSACLG00000012359)	ENSACLG00000012259	hps5 (ENSACLG00000012122)	gtf2h1 (ENSACLG00000012075)	ENSACLG00000012056	ENSACLG00000011980	ENSACLG00000011970	ENSACLG00000011927	ENSACLG00000011882	ENSACLG00000011791	ENSACLG00000011779	ENSACLG00000011711	ENSACLG00000011673	ENSACLG00000011647	saal1 (ENSACLG00000011622) #21	tph1a (ENSACLG00000011604) #22	SERGEF (ENSACLG00000011589) #23	kcnc1b (ENSACLG00000011574) #24	cd81b (ENSACLG00000011562)	pkp3a (ENSACLG00000011554)	sigirr (ENSACLG00000011154)	ANO9 (ENSACLG00000011073)	ANO5 (ENSACLG00000010984)	ENSACLG00000010974	SLC17A6 (ENSACLG00000010927)	fancf (ENSACLG00000010917)	GAS2 (ENSACLG00000010804)	svip (ENSACLG00000010750)	ANO3 (ENSACLG00000010691)	FIBIN (ENSACLG00000010678)	ENSACLG00000010665
Zebra mbuna	MODERN SPECIES	1110	RAB3IL1 (ENSMZEG00005001397)	ENSMZEG00005001429	ENSMZEG00005001436	hps5 (ENSMZEG00005001450)	gtf2h1 (ENSMZEG00005001464)	ENSMZEG00005001521	ENSMZEG00005001526	ENSMZEG00005001538	ENSMZEG00005001577	ENSMZEG00005001611	ENSMZEG00005001662	ENSMZEG00005001749	ENSMZEG00005001763	ENSMZEG00005001831	saal1 (ENSMZEG00005001920) #21	tph1a (ENSMZEG00005001939) #22	SERGEF (ENSMZEG00005001962) #23	kcnc1b (ENSMZEG00005001976) #24	cd81b (ENSMZEG00005001999)	pkp3a (ENSMZEG00005002007)	sigirr (ENSMZEG00005002017)	ANO9 (ENSMZEG00005002032)	ENSMZEG00005002044	ANO5 (ENSMZEG00005002070)	ENSMZEG00005002121	SLC17A6 (ENSMZEG00005002133)	fancf (ENSMZEG00005002170)	GAS2 (ENSMZEG00005002177)	svip (ENSMZEG00005002222)	ANO3 (ENSMZEG00005002248)	FIBIN (ENSMZEG00005002287)
P. nyererei	MODERN SPECIES	322										ENSPNYG00000019017	ENSPNYG00000019035	ENSPNYG00000019060	ENSPNYG00000019074	ENSPNYG00000019108	saal1 (ENSPNYG00000019207) #21	tph1a (ENSPNYG00000019227) #22	SERGEF (ENSPNYG00000019249) #23	kcnc1b (ENSPNYG00000019266) #24	cd81b (ENSPNYG00000019282)	PKP3 (ENSPNYG00000019332)	sigirr (ENSPNYG00000019520)	ANO9 (ENSPNYG00000019539)	ANO5 (ENSPNYG00000019586)	ENSPNYG00000019655	SLC17A6 (ENSPNYG00000019679)	fancf (ENSPNYG00000019710)	GAS2 (ENSPNYG00000019730)	svip (ENSPNYG00000019755)	ANO3 (ENSPNYG00000019781)	FIBIN (ENSPNYG00000019827)	ENSPNYG00000019838
Lyretail cichlid	MODERN SPECIES	305	ENSNBRG00000013948	fth1b (ENSNBRG00000013926)	BEST1 (ENSNBRG00000013895)	RAB3IL1 (ENSNBRG00000013856)	ENSNBRG00000013829	hps5 (ENSNBRG00000013739)	gtf2h1 (ENSNBRG00000013692)	ENSNBRG00000013676	ENSNBRG00000013659	ENSNBRG00000013624	ENSNBRG00000013610	ENSNBRG00000013571	ENSNBRG00000013557	ENSNBRG00000013542	saal1 (ENSNBRG00000013513) #21	tph1a (ENSNBRG00000013478) #22	SERGEF (ENSNBRG00000013448) #23	kcnc1b (ENSNBRG00000013430) #24	cd81b (ENSNBRG00000013407)	pkp3a (ENSNBRG00000013379)	sigirr (ENSNBRG00000013372)	ANO9 (ENSNBRG00000013290)	ANO5 (ENSNBRG00000013237)	ENSNBRG00000013220	SLC17A6 (ENSNBRG00000013191)	fancf (ENSNBRG00000013180)	GAS2 (ENSNBRG00000013160)	svip (ENSNBRG00000013137)	ENSNBRG00000013122	ANO3 (ENSNBRG00000013066)	FIBIN (ENSNBRG00000013052)
Nile tilapia	MODERN SPECIES	19	hps5 (ENSONIG00000015596)	gtf2h1 (ENSONIG00000015602)	ENSONIG00000015606	ENSONIG00000034479	ENSONIG00000038530	ENSONIG00000034631	ENSONIG00000029133	ENSONIG00000041853	ENSONIG00000009430	ENSONIG00000042160	ENSONIG00000041309	ENSONIG00000034115	ENSONIG00000038616	ENSONIG00000029847	ENSONIG00000041877	saal1 (ENSONIG00000008252) #22	ENSONIG00000008259 #23	kcnc1b (ENSONIG00000008261) #24	cd81b (ENSONIG00000008263)	pkp3a (ENSONIG00000008268)	sigirr (ENSONIG00000008270)	ANO9 (ENSONIG00000008275)	ANO5 (ENSONIG00000008281)	ENSONIG00000031542	SLC17A6 (ENSONIG00000008286)	fancf (ENSONIG00000008288)	ENSONIG00000040372	GAS2 (ENSONIG00000008289)	svip (ENSONIG00000042147)	ENSONIG00000027191	ANO3 (ENSONIG00000008292)
Midas cichlid	MODERN SPECIES	470												ENSACIG00000011139	ENSACIG00000011179	ENSACIG00000011190	saal1 (ENSACIG00000011243) #21	tph1a (ENSACIG00000011391) #22	SERGEF (ENSACIG00000011414) #23	kcnc1b (ENSACIG00000011448) #24	cd81b (ENSACIG00000011456)	pkp3a (ENSACIG00000011489)	ENSACIG00000011741	ANO5 (ENSACIG00000011904)	ENSACIG00000011942	SLC17A6 (ENSACIG00000011951)	fancf (ENSACIG00000011987)	GAS2 (ENSACIG00000011994)	svip (ENSACIG00000012008)	ANO3 (ENSACIG00000012021)	FIBIN (ENSACIG00000012069)	ENSACIG00000012074	SPI1 (ENSACIG00000012083)
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00940000166188	ENSGT00940000160155	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Pomacentridae_A	ANCESTRAL SPECIES	9	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000156076.a.b	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Amphiprion	ANCESTRAL SPECIES	4	ENSGT00940000156120.b.n	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00960000186729	ENSGT00940000164871.a.b.a	ENSGT00940000156076.a.a.a.b.a.b	ENSGT00940000163235.E.l	ENSGT00940000164871.a.b.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT01030000234621.E	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Clown anemonefish	MODERN SPECIES	2467				ENSAOCG00000018531	RAB3IL1 (ENSAOCG00000018511)	ENSAOCG00000018475	hps5 (ENSAOCG00000018442)	gtf2h1 (ENSAOCG00000018416)	ENSAOCG00000018349	ENSAOCG00000018326	ENSAOCG00000018287	ENSAOCG00000001299	ENSAOCG00000001259	ENSAOCG00000017851	saal1 (ENSAOCG00000017702) #21	tph1a (ENSAOCG00000017657) #22	SERGEF (ENSAOCG00000017103) #23	kcnc1b (ENSAOCG00000017085) #24	cd81b (ENSAOCG00000017069)	pkp3a (ENSAOCG00000017055)	sigirr (ENSAOCG00000017043)	ANO9 (ENSAOCG00000016999)	ANO5 (ENSAOCG00000016716)	ENSAOCG00000016560	SLC17A6 (ENSAOCG00000016553)	fancf (ENSAOCG00000016520)
Orange clownfish	MODERN SPECIES	18	fth1b (ENSAPEG00000022343)	BEST1 (ENSAPEG00000022363)	RAB3IL1 (ENSAPEG00000022395)	ENSAPEG00000022437	hps5 (ENSAPEG00000022457)	gtf2h1 (ENSAPEG00000022504)	ENSAPEG00000022570	ENSAPEG00000022579	ENSAPEG00000022619	ENSAPEG00000022676	ENSAPEG00000022685	ENSAPEG00000022710	ENSAPEG00000022764	ENSAPEG00000022831	saal1 (ENSAPEG00000023067) #21	tph1a (ENSAPEG00000023092) #22	SERGEF (ENSAPEG00000023117) #23	kcnc1b (ENSAPEG00000023133) #24	cd81b (ENSAPEG00000023149)	pkp3a (ENSAPEG00000023159)	sigirr (ENSAPEG00000023175)	ANO9 (ENSAPEG00000023209)	ANO5 (ENSAPEG00000023288)	SLC17A6 (ENSAPEG00000023320)	fancf (ENSAPEG00000023343)	GAS2 (ENSAPEG00000023349)	svip (ENSAPEG00000023361)	ANO3 (ENSAPEG00000023376)	FIBIN (ENSAPEG00000023442)	ENSAPEG00000023451	ENSAPEG00000023458
Spiny chromis	MODERN SPECIES	144												ENSAPOG00000014227	ENSAPOG00000014183	ENSAPOG00000014079	saal1 (ENSAPOG00000013853) #21	tph1a (ENSAPOG00000013838) #22	SERGEF (ENSAPOG00000013782) #23	kcnc1b (ENSAPOG00000013763) #24	cd81b (ENSAPOG00000013746)	pkp3a (ENSAPOG00000013729)	sigirr (ENSAPOG00000013713)	ANO9 (ENSAPOG00000013692)	ANO5 (ENSAPOG00000013669)	SLC17A6 (ENSAPOG00000013581)	fancf (ENSAPOG00000013535)	GAS2 (ENSAPOG00000013529)	svip (ENSAPOG00000013491)	ANO3 (ENSAPOG00000013443)	FIBIN (ENSAPOG00000000359)	ENSAPOG00000013284	ENSAPOG00000013248
Bicolor damselfish	MODERN SPECIES	867														ENSSPAG00000022495	saal1 (ENSSPAG00000022505) #21	tph1a (ENSSPAG00000022527) #22	SERGEF (ENSSPAG00000022733) #23	kcnc1b (ENSSPAG00000022760) #24	cd81b (ENSSPAG00000022836)	pkp3a (ENSSPAG00000022852)	sigirr (ENSSPAG00000022857)	ANO9 (ENSSPAG00000022863)	ANO5 (ENSSPAG00000022873)	SLC17A6 (ENSSPAG00000022891)	fancf (ENSSPAG00000022896)	GAS2 (ENSSPAG00000022899)	svip (ENSSPAG00000022903)	ANO3 (ENSSPAG00000022907)	FIBIN (ENSSPAG00000022923)	ENSSPAG00000022925	SPI1 (ENSSPAG00000022931)
Tiger tail seahorse	MODERN SPECIES	489	ENSHCOG00000020534	pgghg (ENSHCOG00000020511)	ENSHCOG00000020489	BEST1 (ENSHCOG00000020467)	RAB3IL1 (ENSHCOG00000020454)	ENSHCOG00000020445	hps5 (ENSHCOG00000020419)	gtf2h1 (ENSHCOG00000020395)	ENSHCOG00000020374	ENSHCOG00000020366	ENSHCOG00000020362	ENSHCOG00000020353	ENSHCOG00000000543	ENSHCOG00000020333	saal1 (ENSHCOG00000020313) #21	tph1a (ENSHCOG00000020222) #22	SERGEF (ENSHCOG00000020201) #23	kcnc1b (ENSHCOG00000020157) #24	cd81b (ENSHCOG00000019715)	pkp3a (ENSHCOG00000019684)	sigirr (ENSHCOG00000019636)	ANO9 (ENSHCOG00000019628)	ANO5 (ENSHCOG00000019551)	SLC17A6 (ENSHCOG00000019400)	fancf (ENSHCOG00000019386)	GAS2 (ENSHCOG00000019375)	svip (ENSHCOG00000019355)	ANO3 (ENSHCOG00000019349)	FIBIN (ENSHCOG00000019297)	ENSHCOG00000019282	ENSHCOG00000019228
Pinecone sodierfish	MODERN SPECIES	20	ENSMMDG00005021218	pgghg (ENSMMDG00005021214)	ENSMMDG00005021209	fth1b (ENSMMDG00005021205)	ENSMMDG00005021201	RAB3IL1 (ENSMMDG00005021199)	ENSMMDG00005021196	hps5 (ENSMMDG00005020441)	gtf2h1 (ENSMMDG00005020306)	ENSMMDG00005020302	ENSMMDG00005020300	ENSMMDG00005020293	ENSMMDG00005020275	ENSMMDG00005020260	saal1 (ENSMMDG00005020240) #21	tph1a (ENSMMDG00005020216) #22	SERGEF (ENSMMDG00005020208) #23	kcnc1b (ENSMMDG00005020198) #24	cd81b (ENSMMDG00005020196)	ENSMMDG00005020194	pkp3a (ENSMMDG00005020183)	sigirr (ENSMMDG00005020179)	ANO9 (ENSMMDG00005020175)	ANO5 (ENSMMDG00005018251)	SLC17A6 (ENSMMDG00005018214)	fancf (ENSMMDG00005018211)	GAS2 (ENSMMDG00005018210)	svip (ENSMMDG00005018209)	ANO3 (ENSMMDG00005018208)	slc5a12 (ENSMMDG00005018194)	FIBIN (ENSMMDG00005018189)
Cod	MODERN SPECIES	22	ENSGMOG00000017879	ENSGMOG00000017899	pgghg (ENSGMOG00000017951)	ENSGMOG00000017972	fth1b (ENSGMOG00000018020)	ENSGMOG00000018081	RAB3IL1 (ENSGMOG00000018090)	ENSGMOG00000018101	hps5 (ENSGMOG00000018122)	gtf2h1 (ENSGMOG00000018183)	ENSGMOG00000031576	ENSGMOG00000018210	saal1 (ENSGMOG00000018307) #21	ENSGMOG00000031439	ENSGMOG00000036617	tph1a (ENSGMOG00000018329) #22	SERGEF (ENSGMOG00000018347) #23	kcnc1b (ENSGMOG00000018368) #24	ENSGMOG00000018377	PKP3 (ENSGMOG00000018398)	ENSGMOG00000018427	ANO9 (ENSGMOG00000018449)	ANO5 (ENSGMOG00000018479)	ENSGMOG00000019829	SLC17A6 (ENSGMOG00000018525)	GAS2 (ENSGMOG00000018569)	svip (ENSGMOG00000022857)	ANO3 (ENSGMOG00000018586)	slc5a12 (ENSGMOG00000018617)	ENSGMOG00000036036	FIBIN (ENSGMOG00000018802)
Protacanthopterygii	ANCESTRAL SPECIES	10	ENSGT00940000160155.f	ENSGT00940000156120.b.m.b	ENSGT00390000006297	ENSGT00730000111073	ENSGT00950000182841.b.a.b.a.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000156076.a.a.a.b.b	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257.c.a	ENSGT00940000159545	ENSGT00390000007623.d	ENSGT00390000015299.a.a.b
Northern pike	MODERN SPECIES	18	ENSELUG00000024785	ENSELUG00000032519	ENSELUG00000025805	ENSELUG00000022423	ENSELUG00000022483	ENSELUG00000022522	ENSELUG00000028417	ENSELUG00000021786	ENSELUG00000022373	ENSELUG00000027079	ENSELUG00000021742	ENSELUG00000033157	ENSELUG00000022307	ENSELUG00000021607	saal1 (ENSELUG00000021422) #21	tph1a (ENSELUG00000021403) #22	SERGEF (ENSELUG00000021352) #23	kcnc1b (ENSELUG00000021347) #24	cd81b (ENSELUG00000021313)	pkp3a (ENSELUG00000021274)	sigirr (ENSELUG00000021261)	ANO9 (ENSELUG00000021256)	ENSELUG00000027356	ANO5 (ENSELUG00000021156)	SLC17A6 (ENSELUG00000021040)	ENSELUG00000021001	ENSELUG00000020993	GAS2 (ENSELUG00000020981)	svip (ENSELUG00000020884)	ANO3 (ENSELUG00000020851)	slc5a12 (ENSELUG00000020753)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	933															ENSGT00950000182838.A.a.b.m	ENSGT00950000182885.A.a.f.e.a #22	ENSGT00940000156912.c.a #24	ENSGT00940000158805.a.j	ENSGT00940000159515.c.b	ENSGT00940000158300.f.e	ENSGT00390000011846.a.b
Salmoninae_a	ANCESTRAL SPECIES	136	ENSGT00390000013104.e	ENSGT00940000162219.b	ENSGT00940000177923	ENSGT00940000156076.a.a.a.a.f.b	ENSGT01040000240607.b	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a.f.a.b	ENSGT01040000240607.a	ENSGT00390000013104.f	ENSGT00940000163235.A.a.a.b.c.a	ENSGT00940000156076.a.a.a.a.e	ENSGT00940000162219.a	ENSGT00940000163235.A.a.a.b.d	ENSGT00940000156076.a.a.a.a.f.a.a	ENSGT00950000182838.A.a.b.m	ENSGT00950000182885.A.a.f.e.a #22	ENSGT00940000156912.c.a.b #24	ENSGT00940000158805.a.j	ENSGT00940000159515.c.b.c	ENSGT00940000158300.f.e	ENSGT00390000011846.a.b
Salmo	ANCESTRAL SPECIES	30	ENSGT00390000010285.d.h.a	ENSGT00940000161906.c	ENSGT00530000067249	ENSGT00390000013091.eb	ENSGT00390000004738.z	ENSGT00390000016908.n	ENSGT00940000159646.i.b	ENSGT00940000161531.a.a.c.a	ENSGT01050000244951.a.b.a.a.g.b.g	ENSGT00940000155948.b.a.c	ENSGT00940000154910.b.b.q	ENSGT00390000013104.e	ENSGT00940000163235.A.a.a.b.d	ENSGT00940000156076.a.a.a.a.f.a.a	ENSGT00950000182838.A.a.b.m	ENSGT00950000182885.A.a.f.e.a #22	ENSGT00940000156912.c.a.b #24	ENSGT00940000158805.a.j.a	ENSGT00940000159515.c.b.c	ENSGT00940000158300.f.e	ENSGT00390000011846.a.b	ENSGT00940000155692.j.k	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b.h	ENSGT00390000015299.a.a.a.j	ENSGT00940000157349.kb.b	ENSGT00940000159754.a.f.a	ENSGT00940000157698.b.q	ENSGT00940000157925.n	ENSGT00390000014756.e.b.a.a.a	ENSGT00940000159058.c
Atlantic salmon	MODERN SPECIES	18	ENSSSAG00000052619	cmc2 (ENSSSAG00000052629)	cdyl2 (ENSSSAG00000052637)	ENSSSAG00000052644	ENSSSAG00000052684	ENSSSAG00000041695	spon1a (ENSSSAG00000052884)	ENSSSAG00000056681	ENSSSAG00000059113	ENSSSAG00000110236	ENSSSAG00000113269	ENSSSAG00000056775	ENSSSAG00000022087	ENSSSAG00000040384	ENSSSAG00000056947	ENSSSAG00000093916 #22	kcnc1a (ENSSSAG00000060308) #24	cd81a (ENSSSAG00000060487)	ENSSSAG00000060561	ENSSSAG00000061274	tssc4 (ENSSSAG00000094946)	ano5b (ENSSSAG00000061688)	ENSSSAG00000064462	ENSSSAG00000064466	slc39a13 (ENSSSAG00000113991)	spi1b (ENSSSAG00000064470)	MYBPC3 (ENSSSAG00000120555)	lgr4 (ENSSSAG00000066848)	mettl15 (ENSSSAG00000010741)	ENSSSAG00000066873	bdnf (ENSSSAG00000049896)
River trout	MODERN SPECIES	21	SYT9 (ENSSTUG00000012465)	spon1a (ENSSTUG00000011796)	tollip (ENSSTUG00000011745)	ENSSTUG00000011725	ENSSTUG00000011712	ENSSTUG00000011693	ENSSTUG00000011679	ENSSTUG00000011661	ENSSTUG00000011645	ENSSTUG00000011639	ENSSTUG00000011623	ENSSTUG00000011539	ENSSTUG00000011428	ENSSTUG00000011407	AP2A2 (ENSSTUG00000011126)	tph1a (ENSSTUG00000010850) #22	kcnc1a (ENSSTUG00000010797) #24	cd81a (ENSSTUG00000010784)	PKP3 (ENSSTUG00000010701)	ANO9 (ENSSTUG00000010484)	ENSSTUG00000010468	ano5b (ENSSTUG00000009739)	slc17a6b (ENSSTUG00000009068)	GAS2 (ENSSTUG00000009040)	ENSSTUG00000009032	slc39a13 (ENSSTUG00000009009)	spi1b (ENSSTUG00000008983)	mybpc3 (ENSSTUG00000004080)	lgr4 (ENSSTUG00000003578)	mettl15 (ENSSTUG00000025797)	ENSSTUG00000025639
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00700000104539.b.a.f	ENSGT00390000010285.d.h	ENSGT00940000161906.c	ENSGT00390000013091.gb	ENSGT00390000004738.z	ENSGT00390000016908.m	ENSGT00940000159646.i.b	ENSGT00940000161531.a.a.c.a	ENSGT01090000262925	ENSGT01050000244951.a.b.a.a.g.b.g	ENSGT00940000155948.b.a.c	ENSGT00940000154910.b.b.q	ENSGT00390000013104.e	ENSGT00940000162219.b	ENSGT00950000182838.A.a.b.m	ENSGT00950000182885.A.a.f.e.a #22	ENSGT00940000156912.c.a.b.a #24	ENSGT00940000158805.a.j	ENSGT00940000159515.c.b.c	ENSGT00940000158300.f.e	ENSGT00990000209012.d	ENSGT00940000155692.j.m	ENSGT00940000155891.c.b.f	ENSGT00940000155755.a.b.h	ENSGT00390000015299.a.a.a.j	ENSGT00940000157349.kb.b	ENSGT00940000159754.a.f.a	ENSGT00940000157698.b.q	ENSGT00940000157925.n.a	ENSGT00390000014756.e.b.b	ENSGT00940000159058.c
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00390000010285.d.h	ENSGT00940000161906.c	ENSGT00390000013091.gb	ENSGT00390000004738.z	ENSGT00390000016908.m	ENSGT00940000159646.i.b	ENSGT00940000161531.a.a.c.a	ENSGT01090000262925	ENSGT01050000244951.a.b.a.a.g.b.g	ENSGT00940000155948.b.a.c	ENSGT00940000154910.b.b.r.a.a	ENSGT00940000154910.b.b.q	ENSGT00390000013104.e	ENSGT00940000156076.a.a.a.a.e.d	ENSGT00950000182838.A.a.b.m	ENSGT00950000182885.A.a.f.e.a #22	ENSGT00940000156912.c.a.b.a #24	ENSGT00940000158805.a.j	ENSGT00940000159515.c.b.c	ENSGT00940000158300.f.e	ENSGT00990000209012.d	ENSGT00940000155692.j.m	ENSGT00940000155891.c.b.f	ENSGT00940000155755.a.b.h	ENSGT00390000015299.a.a.a.j.a	ENSGT00940000157349.kb.b	ENSGT00940000159754.a.f.a	ENSGT00940000157698.b.q	ENSGT00940000157925.n.a	ENSGT00390000014756.e.b.b	ENSGT00940000159058.c
Chinook salmon	MODERN SPECIES	28	cenpn (ENSOTSG00005002785)	cmc2 (ENSOTSG00005002794)	CDYL2 (ENSOTSG00005002802)	spon1a (ENSOTSG00005002842)	tollip (ENSOTSG00005003439)	ENSOTSG00005003721	ENSOTSG00005003725	ENSOTSG00005003726	ENSOTSG00005003727	ENSOTSG00005003729	ENSOTSG00005003731	ENSOTSG00005003734	ENSOTSG00005003737	ENSOTSG00005003739	AP2A2 (ENSOTSG00005003748)	TPH1 (ENSOTSG00005004128) #22	kcnc1a (ENSOTSG00005006512) #24	ENSOTSG00005006513	ENSOTSG00005006514	kcnc1a (ENSOTSG00005006515) #24	cd81a (ENSOTSG00005006516)	PKP3 (ENSOTSG00005006518)	ANO9 (ENSOTSG00005006520)	ENSOTSG00005006527	ano5b (ENSOTSG00005006546)	slc17a6b (ENSOTSG00005007994)	GAS2 (ENSOTSG00005008159)	ENSOTSG00005008160	slc39a13 (ENSOTSG00005008161)	spi1b (ENSOTSG00005008162)	mybpc3 (ENSOTSG00005008163)
Coho salmon	MODERN SPECIES	22	ENSOKIG00005025217	ATMIN (ENSOKIG00005025254)	cenpn (ENSOKIG00005025286)	cmc2 (ENSOKIG00005025339)	CDYL2 (ENSOKIG00005025351)	ENSOKIG00005025475	MAF (ENSOKIG00005025485)	PPFIBP2 (ENSOKIG00005025532)	ENSOKIG00005025729	SYT9 (ENSOKIG00005025736)	spon1a (ENSOKIG00005025781)	tollip (ENSOKIG00005026290)	ENSOKIG00005026476	ENSOKIG00005026898	AP2A2 (ENSOKIG00005026928)	TPH1 (ENSOKIG00005027297) #22	kcnc1a (ENSOKIG00005028628) #24	cd81a (ENSOKIG00005028691)	PKP3 (ENSOKIG00005028711)	ENSOKIG00005028766	ENSOKIG00005028851	ano5b (ENSOKIG00005028918)	slc17a6b (ENSOKIG00005029928)	GAS2 (ENSOKIG00005030329)	ENSOKIG00005030345	slc39a13 (ENSOKIG00005030368)	spi1b (ENSOKIG00005003740)	mybpc3 (ENSOKIG00005004064)	lgr4 (ENSOKIG00005012278)	mettl15 (ENSOKIG00005012305)	ENSOKIG00005012330
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000015686	ENSOMYG00000076323	ENSOMYG00000015713	ENSOMYG00000062892	ENSOMYG00000015788	spon1a (ENSOMYG00000015807)	tollip (ENSOMYG00000015845)	ENSOMYG00000015931	ENSOMYG00000061323	ENSOMYG00000065765	ENSOMYG00000055758	ENSOMYG00000057893	ENSOMYG00000063342	ENSOMYG00000016138	AP2A2 (ENSOMYG00000016458)	ENSOMYG00000016798 #22	kcnc1a (ENSOMYG00000019361) #24	cd81a (ENSOMYG00000019389)	ENSOMYG00000019428	ENSOMYG00000019507	ENSOMYG00000019543	ano5b (ENSOMYG00000019690)	slc17a6b (ENSOMYG00000020529)	GAS2 (ENSOMYG00000022303)	ENSOMYG00000022316	slc39a13 (ENSOMYG00000022349)	ENSOMYG00000051446	spi1b (ENSOMYG00000022378)	MYBPC3 (ENSOMYG00000022744)	lgr4 (ENSOMYG00000024097)	mettl15 (ENSOMYG00000024227)
Huchen	MODERN SPECIES	959														ENSHHUG00000022563	AP2A2 (ENSHHUG00000022585)	tph1a (ENSHHUG00000022620) #22	kcnc1a (ENSHHUG00000023331) #24	cd81a (ENSHHUG00000023351)	PKP3 (ENSHHUG00000023385)	ANO9 (ENSHHUG00000023417)	tssc4 (ENSHHUG00000023437)	ano5b (ENSHHUG00000023444)	slc17a6b (ENSHHUG00000023789)	GAS2 (ENSHHUG00000023882)	ENSHHUG00000023888	slc39a13 (ENSHHUG00000023892)	spi1b (ENSHHUG00000023906)	mybpc3 (ENSHHUG00000023916)	ENSHHUG00000024716	lgr4 (ENSHHUG00000024729)
Salmoninae	ANCESTRAL SPECIES	70	ENSGT00940000155948.b.a.c	ENSGT00940000154910.b.b.q	ENSGT00390000013104.e	ENSGT00940000162219.b	ENSGT00940000163235.A.a.a.b.c.b	ENSGT00940000177923	ENSGT00940000156076.a.a.a.a.f.b	ENSGT01040000240607.b	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a.e	ENSGT00940000162219.a	ENSGT00940000163235.A.a.a.b.d	ENSGT00940000156076.a.a.a.a.f.a	ENSGT01040000240607.a	ENSGT00950000182838.A.a.b.n	ENSGT00950000182885.A.a.f.e.b #22	ENSGT00940000158300.f.f	ENSGT00390000011846.a.a	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b	ENSGT00390000015299.a.a.a	ENSGT00940000157349	ENSGT00940000159754.a.f	ENSGT00940000157698.b.q	ENSGT00940000157925.m	ENSGT00390000014756.e.a	ENSGT00940000159754.a.e	ENSGT00940000157698.b.r	ENSGT00940000157925.n	ENSGT00390000014756.e.b.b
Salmoninae_a	ANCESTRAL SPECIES	72	ENSGT00390000002407.d	ENSGT00390000006738.a.c	ENSGT00390000007838.d.a	ENSGT00700000104539.b.a.e	ENSGT00390000010285.d.g	ENSGT00940000161906.d	ENSGT00390000016908.n	ENSGT00390000004738.y	ENSGT00940000159646.i.a	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000161531.a.a.c.b	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000155948.b.a.d	ENSGT00940000154910.b.b.r.b	ENSGT00950000182838.A.a.b.n	ENSGT00950000182885.A.a.f.e.b #22	ENSGT00940000156912.c.a.a #24	ENSGT00940000158805.a.i	ENSGT00940000159515.c.b.d	ENSGT00940000158300.f.f	ENSGT00390000011846.a.a	ENSGT00990000209012	ENSGT00940000155692.j	ENSGT00940000155891.c.b	ENSGT00940000155755.a.b.h	ENSGT00390000015299.a.a.a.j	ENSGT00940000157349.kb.b	ENSGT00940000159754.a.f.a	ENSGT00940000157698.b.q	ENSGT00940000157925.n	ENSGT00390000014756.e.b.b
Salmo	ANCESTRAL SPECIES	27	ENSGT00390000007838.c	ENSGT00390000010285.d.h.b	ENSGT00940000161906.d	ENSGT00390000013091.db	ENSGT00390000004738.y	ENSGT00390000016908.m	ENSGT00940000159646.i.a	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000161531.a.a.c.b	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000155948.b.a.d	ENSGT00940000154910.b.b.r.b	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a.e.a	ENSGT00950000182838.A.a.b.n	ENSGT00950000182885.A.a.f.e.b #22	ENSGT00940000156912.c.a.a #24	ENSGT00940000158805.a.j.b	ENSGT00940000159515.c.b.d	ENSGT00940000158300.f.f	ENSGT00390000011846.a.a	ENSGT00940000155692.j.l	ENSGT00940000155755.a.b.g	ENSGT00390000015299.a.a.a.i	ENSGT00940000157349.kb.a	ENSGT00940000159754.a.e	ENSGT00940000157698.b.r	ENSGT00940000157925.m	ENSGT00390000014756.e.a	ENSGT00940000159058.d	ENSGT00390000007725.B.d.e.a.a
River trout	MODERN SPECIES	3	SYT9 (ENSSTUG00000021450)	spon1a (ENSSTUG00000021488)	tollip (ENSSTUG00000022758)	ENSSTUG00000022843	ENSSTUG00000023088	ENSSTUG00000023097	ENSSTUG00000023131	ENSSTUG00000023140	ENSSTUG00000023206	ENSSTUG00000023222	ENSSTUG00000023239	ENSSTUG00000023249	ENSSTUG00000023262	ENSSTUG00000023335	AP2A2 (ENSSTUG00000023353)	tph1a (ENSSTUG00000023632) #22	kcnc1a (ENSSTUG00000025764) #24	cd81a (ENSSTUG00000025798)	PKP3 (ENSSTUG00000025807)	ANO9 (ENSSTUG00000025861)	ENSSTUG00000025940	ano5b (ENSSTUG00000025977)	ENSSTUG00000026613	ENSSTUG00000027047	slc39a13 (ENSSTUG00000027054)	spi1b (ENSSTUG00000027063)	mybpc3 (ENSSTUG00000027127)	ENSSTUG00000029978	ENSSTUG00000029983	ENSSTUG00000029991	lgr4 (ENSSTUG00000030006)
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000049998	ATMIN (ENSSSAG00000050004)	cenpn (ENSSSAG00000037933)	cmc2 (ENSSSAG00000038143)	ENSSSAG00000038342	ENSSSAG00000120094	maf (ENSSSAG00000108168)	ENSSSAG00000038842	ENSSSAG00000052802	spon1a (ENSSSAG00000041786)	tollip (ENSSSAG00000043323)	ENSSSAG00000043491	ENSSSAG00000103686	ENSSSAG00000083206	ENSSSAG00000043756	ENSSSAG00000110748 #22	kcnc1a (ENSSSAG00000093724) #24	CD81 (ENSSSAG00000005195)	ENSSSAG00000090577	pkp3 (ENSSSAG00000005238)	ENSSSAG00000005332	tssc4 (ENSSSAG00000005356)	ano5b (ENSSSAG00000005417)	slc17a6b (ENSSSAG00000121222)	GAS2 (ENSSSAG00000007553)	ENSSSAG00000093285	slc39a13 (ENSSSAG00000007564)	spi1b (ENSSSAG00000007573)	MYBPC3 (ENSSSAG00000099433)	lgr4 (ENSSSAG00000101379)	mettl15 (ENSSSAG00000091214)
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000155948.b.a.d	ENSGT00940000154910.b.b.r.a.b	ENSGT00390000013104.f	ENSGT00940000156076.a.a.a.a.f.b.d	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a.f.a.b	ENSGT00940000156076.a.a.a.a.e.d	ENSGT00940000163235.A.a.a.b.d	ENSGT00940000177923	ENSGT00940000156076.a.a.a.a.f.b.c	ENSGT01040000240607.b	ENSGT00940000156076.a.a.a.a.e.c.b	ENSGT00940000163235.A.a.a.b.c.a	ENSGT00940000156076.a.a.a.a.e.c.a	ENSGT00950000182838.A.a.b.n	ENSGT00950000182885.A.a.f.e.b #22	ENSGT00940000156912.c.a.b.b #24	ENSGT00940000158805.a.i	ENSGT00940000159515.c.b.d	ENSGT00940000158300.f.f	ENSGT00390000011846.b	ENSGT00940000155692.j.n	ENSGT00940000155891.c.b.e	ENSGT00940000155755.a.b.g	ENSGT00390000015299.a.a.a.i	ENSGT00940000157349.kb.a	ENSGT00940000159754.a.f.b	ENSGT00940000157698.b.r	ENSGT00940000157925.n.b	ENSGT00390000014756.e.b.a.b	ENSGT00940000159058.d
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00390000013091.fb	ENSGT00390000016908.n	ENSGT00390000004738.y	ENSGT00940000159646.i.a	ENSGT00500000044904.a.b.g.b.d	ENSGT00940000161531.a.a.c.b	ENSGT01050000244951.a.b.a.a.g.b.h	ENSGT00940000155948.b.a.d	ENSGT00940000154910.b.b.r.a.b	ENSGT00390000013104.f	ENSGT00940000156076.a.a.a.a.f.b.c	ENSGT00940000156076.a.a.a.a.e.c.b	ENSGT00940000163235.A.a.a.b.c.a	ENSGT00940000156076.a.a.a.a.e.c.a	ENSGT00950000182838.A.a.b.n	ENSGT00950000182885.A.a.f.e.b #22	ENSGT00940000156912.c.a.b.b #24	ENSGT00940000158805.a.i	ENSGT00940000159515.c.b.d	ENSGT00940000158300.f.f	ENSGT00390000011846.b	ENSGT00940000155692.j.n	ENSGT00940000155891.c.b.e	ENSGT00940000155755.a.b.g	ENSGT00390000015299.a.a.a.i	ENSGT00940000157349.kb.a	ENSGT00940000159754.a.f.b	ENSGT00940000157698.b.r	ENSGT00940000157925.n.b	ENSGT00390000014756.e.b.a.b	ENSGT00940000159058.d
Chinook salmon	MODERN SPECIES	284												ENSOTSG00005023019	ENSOTSG00005023011	ENSOTSG00005023010	ENSOTSG00005022301	tph1a (ENSOTSG00005017531) #22	kcnc1a (ENSOTSG00005017527) #24	cd81a (ENSOTSG00005017526)
Coho salmon	MODERN SPECIES	28	cenpn (ENSOKIG00005005482)	CDYL2 (ENSOKIG00005005495)	ENSOKIG00005005502	MAF (ENSOKIG00005005519)	PPFIBP2 (ENSOKIG00005005533)	SYT9 (ENSOKIG00005005582)	spon1a (ENSOKIG00005005745)	TOLLIP (ENSOKIG00005007917)	ENSOKIG00005008093	ENSOKIG00005008288	ENSOKIG00005008329	ENSOKIG00005008434	ENSOKIG00005008498	ENSOKIG00005008991	AP2A2 (ENSOKIG00005010027)	tph1a (ENSOKIG00005010267) #22	kcnc1a (ENSOKIG00005010446) #24	cd81a (ENSOKIG00005010471)	ENSOKIG00005010507	ANO9 (ENSOKIG00005010938)	tssc4 (ENSOKIG00005011020)	ano5b (ENSOKIG00005011046)	slc17a6b (ENSOKIG00005011199)	GAS2 (ENSOKIG00005011333)	ENSOKIG00005011337	ENSOKIG00005011346	slc39a13 (ENSOKIG00005011353)	spi1b (ENSOKIG00005011365)	MYBPC3 (ENSOKIG00005011994)	lgr4 (ENSOKIG00005019677)	mettl15 (ENSOKIG00005019993)
Rainbow trout	MODERN SPECIES	18	ENSOMYG00000055174	ENSOMYG00000041639	ENSOMYG00000041642	ENSOMYG00000041654	ENSOMYG00000041670	ENSOMYG00000041680	ENSOMYG00000054357	spon1a (ENSOMYG00000041701)	TOLLIP (ENSOMYG00000041767)	ENSOMYG00000055755	ENSOMYG00000041817	ENSOMYG00000065046	ENSOMYG00000066766	ENSOMYG00000041942	AP2A2 (ENSOMYG00000042059)	ENSOMYG00000042534 #22	kcnc1a (ENSOMYG00000043474) #24	cd81a (ENSOMYG00000043505)	ENSOMYG00000043510	ENSOMYG00000056987	ENSOMYG00000043527	ENSOMYG00000043577	ano5b (ENSOMYG00000043612)	slc17a6b (ENSOMYG00000043695)	ENSOMYG00000062906	GAS2 (ENSOMYG00000043839)	ENSOMYG00000043844	slc39a13 (ENSOMYG00000043858)	ENSOMYG00000052876	spi1b (ENSOMYG00000043870)	MYBPC3 (ENSOMYG00000044004)
Huchen	MODERN SPECIES	611					tollip (ENSHHUG00000030344)	ENSHHUG00000030326	ENSHHUG00000030322	ENSHHUG00000030315	ENSHHUG00000030303	ENSHHUG00000030277	ENSHHUG00000030232	ENSHHUG00000030213	ENSHHUG00000030205	ENSHHUG00000030197	AP2A2 (ENSHHUG00000030176)	tph1a (ENSHHUG00000029718) #22	kcnc1a (ENSHHUG00000029683) #24	cd81a (ENSHHUG00000029605)	PKP3 (ENSHHUG00000029561)	ANO9 (ENSHHUG00000029543)	tssc4 (ENSHHUG00000029534)	ano5b (ENSHHUG00000029410)	slc17a6b (ENSHHUG00000029317)	GAS2 (ENSHHUG00000029311)	ENSHHUG00000029310	slc39a13 (ENSHHUG00000029307)	spi1b (ENSHHUG00000029296)	mybpc3 (ENSHHUG00000026280)	lgr4 (ENSHHUG00000026188)
Salmoninae	ANCESTRAL SPECIES	545									ENSGT00940000159102.c.b	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066.w	ENSGT00940000163235.E	ENSGT00940000164871.b.h	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f.f #22	ENSGT00940000156912.c.b.d #24	ENSGT00940000158805.b.c	ENSGT00940000159515.c.a.a	ENSGT00940000158300.e	ENSGT00940000155692.i.a	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a.c	ENSGT00940000167680	ENSGT00940000156257.c.a.a
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT00950000182990.a.a.a.b.c.a.a	ENSGT00950000182990.a.a.a.b.c.b.a	ENSGT00940000155040.a.c	ENSGT00940000157180.a.e	ENSGT00940000165631.p.a.b	ENSGT00940000166188	ENSGT01090000260704.a	ENSGT00730000111073.f	ENSGT00940000159102.c.b	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066.w	ENSGT00940000163235.E	ENSGT00940000164871.b.h	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f.f #22	ENSGT00940000156912.c.b.d #24	ENSGT00940000158805.b.c	ENSGT00940000159515.c.a.a	ENSGT00940000158300.e	ENSGT00940000155692.i.a	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a.c	ENSGT00940000167680.a	ENSGT00940000156257.c.a.a	ENSGT00390000015299.a.a.b.d	ENSGT00940000159754.b.a	ENSGT00390000009453.fb.a.a	ENSGT00390000008092.b.a.a	ENSGT00390000017625.n.a.a
Salmo	ANCESTRAL SPECIES	50							ENSGT01090000260704.a	ENSGT00730000111073.f	ENSGT00940000159102.c.b	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066.w	ENSGT00940000163235.E	ENSGT00940000164871.b.h	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f.f #22	ENSGT00940000156912.c.b.d #24	ENSGT00940000158805.b.c	ENSGT00940000159515.c.a.a	ENSGT00940000158300.e	ENSGT00940000155692.i.a	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a.c	ENSGT00940000167680.a	ENSGT00940000156257.c.a.a	ENSGT00390000015299.a.a.b.d	ENSGT00940000159754.b.a	ENSGT00390000009453.fb.a.a	ENSGT00390000008092.b.a.a	ENSGT00390000017625.n.a.a
River trout	MODERN SPECIES	33	ENSSTUG00000021423	PNPLA2 (ENSSTUG00000021417)	ENSSTUG00000021413	ENSSTUG00000021407	ENSSTUG00000021401	ENSSTUG00000021395	RAB3IL1 (ENSSTUG00000021247)	ENSSTUG00000021186	hps5 (ENSSTUG00000021021)	gtf2h1 (ENSSTUG00000020859)	ENSSTUG00000020677	ENSSTUG00000020595	ENSSTUG00000020576	ENSSTUG00000020022	saal1 (ENSSTUG00000019937) #21	tph1a (ENSSTUG00000017920) #22	ENSSTUG00000017862	KCNC1 (ENSSTUG00000017842) #24	cd81b (ENSSTUG00000017832)	pkp3a (ENSSTUG00000017561)	ANO9 (ENSSTUG00000017448)	ENSSTUG00000017435	ANO5 (ENSSTUG00000015601)	GAS2 (ENSSTUG00000015499)	fancf (ENSSTUG00000015489)	SLC17A6 (ENSSTUG00000014770)	svip (ENSSTUG00000029713)	ENSSTUG00000029705	ANO3 (ENSSTUG00000029008)	ENSSTUG00000028980	ENSSTUG00000028966
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000069969	ENSSSAG00000093471	ENSSSAG00000069975	ENSSSAG00000070005	ENSSSAG00000069981	ENSSSAG00000110672	ENSSSAG00000069314	ENSSSAG00000069783	hps5 (ENSSSAG00000069961)	gtf2h1 (ENSSSAG00000043259)	ENSSSAG00000010061	ENSSSAG00000070024	ENSSSAG00000015781	ENSSSAG00000096157	saal1 (ENSSSAG00000068794) #21	tph1a (ENSSSAG00000102791) #22	kcnc1b (ENSSSAG00000052323) #24	ENSSSAG00000068746	ENSSSAG00000068732	ENSSSAG00000068707	ANO5 (ENSSSAG00000068469)	SLC17A6 (ENSSSAG00000068015)	fancf (ENSSSAG00000088573)	ENSSSAG00000067967	GAS2 (ENSSSAG00000105867)	ENSSSAG00000102506	svip (ENSSSAG00000067935)	ANO3 (ENSSSAG00000067407)	ENSSSAG00000067388	ENSSSAG00000067382	ENSSSAG00000084584
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00940000160990.e.b	ENSGT00950000182990.a.a.a.b.c.b.a	ENSGT00940000155040.a.c	ENSGT01060000248781.e.b	ENSGT00940000157180.a.e	ENSGT00940000165631.p.a.b	ENSGT00940000166188	ENSGT01090000260704.a	ENSGT00730000111073.f	ENSGT00940000159102.c.b	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066.w	ENSGT00940000164871.b.h	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f.f #22	ENSGT00940000156912.c.b.d #24	ENSGT00940000158805.b.c	ENSGT00940000159515.c.a.a	ENSGT00940000158300.e	ENSGT00940000155692.i.a	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a.c.a	ENSGT00940000155755.a.a.c.b	ENSGT00940000167680.a	ENSGT00940000156257.c.a.a	ENSGT00390000015299.a.a.b.d	ENSGT00390000009453.fb.a.a	ENSGT00390000008092.b.a.a	ENSGT00390000017625.n.a.a
Rainbow trout	MODERN SPECIES	22	ENSOMYG00000063217	ENSOMYG00000063715	ENSOMYG00000075119	ENSOMYG00000057836	ENSOMYG00000052524	ENSOMYG00000070674	ENSOMYG00000000077	ENSOMYG00000062186	ENSOMYG00000048754	ENSOMYG00000051741	hps5 (ENSOMYG00000000219)	gtf2h1 (ENSOMYG00000000258)	ENSOMYG00000000331	ENSOMYG00000000375	saal1 (ENSOMYG00000000427) #21	tph1a (ENSOMYG00000000567) #22	kcnc1b (ENSOMYG00000026712) #24	ENSOMYG00000077440	ENSOMYG00000000776	ENSOMYG00000067956	ENSOMYG00000000817	ANO5 (ENSOMYG00000000845)	ENSOMYG00000071068	SLC17A6 (ENSOMYG00000001316)	fancf (ENSOMYG00000001676)	GAS2 (ENSOMYG00000001723)	ENSOMYG00000001784	svip (ENSOMYG00000051279)	ANO3 (ENSOMYG00000001861)	ENSOMYG00000077292	ENSOMYG00000001895
Oncorhynchus_a	ANCESTRAL SPECIES	36	ENSGT00950000182990.a.a.a.b.c.b.a	ENSGT00950000182990.a.a.a.b.c.a.a	ENSGT01060000248781.e.b	ENSGT00940000157180.a.e	ENSGT00940000165631.o	ENSGT00940000172147	ENSGT00940000160155.e.b	ENSGT00940000156120.b.m.a.a.a	ENSGT00940000155040.a.c	ENSGT00940000159102.c.b	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066.w	ENSGT00940000164871.b.h	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f.f #22	ENSGT00940000156912.c.b.d #24	ENSGT00940000158805.b.c	ENSGT00940000159515.c.a.a	ENSGT00940000158300.e	ENSGT00940000155692.i.a	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a.c.a	ENSGT00940000155755.a.a.c.b	ENSGT00940000167680.a	ENSGT00940000156257.c.a.a	ENSGT00390000015299.a.a.b.d	ENSGT00390000009453.fb.a.a	ENSGT00390000008092.b.a.a	ENSGT00390000017625.n.a.a
Coho salmon	MODERN SPECIES	1	ENSOKIG00005015601	ENSOKIG00005015607	ENSOKIG00005015623	PNPLA2 (ENSOKIG00005015715)	ENSOKIG00005015739	ENSOKIG00005015760	RAB3IL1 (ENSOKIG00005015781)	ENSOKIG00005015868	ENSOKIG00005016054	hps5 (ENSOKIG00005016089)	gtf2h1 (ENSOKIG00005016173)	ENSOKIG00005016291	ENSOKIG00005016579	ENSOKIG00005016742	saal1 (ENSOKIG00005016747) #21	tph1a (ENSOKIG00005016790) #22	kcnc1b (ENSOKIG00005016907) #24	ENSOKIG00005016946	PKP3 (ENSOKIG00005016975)	ANO9 (ENSOKIG00005017019)	ANO5 (ENSOKIG00005017122)	SLC17A6 (ENSOKIG00005017408)	fancf (ENSOKIG00005017888)	GAS2 (ENSOKIG00005017896)	ENSOKIG00005017919	svip (ENSOKIG00005017933)	ANO3 (ENSOKIG00005017982)	ENSOKIG00005018327	PRC1 (ENSOKIG00005018343)	ENSOKIG00005018529	CLPX (ENSOKIG00005018620)
Chinook salmon	MODERN SPECIES	350												ENSOTSG00005023412	ENSOTSG00005023410	ENSOTSG00005023408	saal1 (ENSOTSG00005023405) #21	tph1a (ENSOTSG00005021830) #22
Huchen	MODERN SPECIES	6724																tph1a (ENSHHUG00000010547) #22
Otomorpha	ANCESTRAL SPECIES	159	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.A.a.a.b	ENSGT00940000156076.a.b.b.b	ENSGT00940000177923	ENSGT00940000156076.a.a.a.a.d.b	ENSGT01040000240607	ENSGT00940000163235.A.a.b	ENSGT00940000156076.a.a.a.a.c	ENSGT00940000156076.b	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.d	ENSGT00390000005623	ENSGT01050000245471	ENSGT00940000155755.a.a	ENSGT00940000167680	ENSGT00940000156257	ENSGT00940000159545	ENSGT00390000007623.d
Otophysi	ANCESTRAL SPECIES	31	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00940000176053	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00950000183125.a	ENSGT00940000156776.d.b.a	ENSGT00390000011492.b	ENSGT00390000009047.b	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a ##29
Characiphysae	ANCESTRAL SPECIES	6	ENSGT00940000156476.h	ENSGT00390000016075	ENSGT00940000176053	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00950000183125.a	ENSGT00940000156776.d.b.a	ENSGT00390000011492.b	ENSGT00390000009047.b	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a ##29	ENSGT00940000160208.m
Channel catfish	MODERN SPECIES	5	mpi (ENSIPUG00000010951)	ENSIPUG00000010940	BEST1 (ENSIPUG00000010917)	RAB3IL1 (ENSIPUG00000010833)	ENSIPUG00000010809	HPS5 (ENSIPUG00000010772)	GTF2H1 (ENSIPUG00000010708)	ENSIPUG00000010695	ENSIPUG00000010681	ENSIPUG00000010658	ENSIPUG00000010640	ENSIPUG00000010610	ENSIPUG00000010588	ENSIPUG00000010574	saal1 (ENSIPUG00000010526) #21	tph (ENSIPUG00000010464) #22	sergef (ENSIPUG00000010447) #23	kcnc1 (ENSIPUG00000010415) #24	dhtkd1 (ENSIPUG00000010338)	camk1db (ENSIPUG00000010303)	ucma (ENSIPUG00000010284)	hal (ENSIPUG00000010229)	nox5 (ENSIPUG00000010196)	glcea (ENSIPUG00000010184)	mdkb (ENSIPUG00000010158)	ambra1b (ENSIPUG00000010044)	DGKZ (ENSIPUG00000009929)	PHF21A (ENSIPUG00000009766)	ENSIPUG00000009746	prdm11 (ENSIPUG00000009718)	ENSIPUG00000009711
Characiphysae_b	ANCESTRAL SPECIES	5	ENSGT00390000016075	ENSGT00940000176053	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.A.b.a.b	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00950000183125.a	ENSGT00940000156776.d.b.a	ENSGT00390000011492.b	ENSGT00730000111314	ENSGT00390000009047.b	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a ##29
Characoidei	ANCESTRAL SPECIES	65											ENSGT00940000163235.A.b.a.b	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000166466.e.a	ENSGT00940000156912.c.b #24	ENSGT00950000183125.a	ENSGT00940000156776.d.b.a	ENSGT00390000011492.b	ENSGT00390000009047.b	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a ##29
Mexicana tetra	MODERN SPECIES	23	ENSAMXG00000014794	ENSAMXG00000014800	ENSAMXG00000014804	RFX7 (ENSAMXG00000038850)	ENSAMXG00000014818	rsl24d1 (ENSAMXG00000034851)	myo9ab (ENSAMXG00000014841)	GRAMD2A (ENSAMXG00000035859)	ENSAMXG00000040899	znf609a (ENSAMXG00000036830)	ENSAMXG00000000858	ENSAMXG00000030647	spg11 (ENSAMXG00000000846)	ciao2a (ENSAMXG00000041610)	saal1 (ENSAMXG00000018126) #21	tph1a (ENSAMXG00000018104) #22	SERGEF (ENSAMXG00000018058) #23	ENSAMXG00000036422	kcnc1b (ENSAMXG00000017988) #24	dhtkd1 (ENSAMXG00000017957)	camk1db (ENSAMXG00000032944)	ucmab (ENSAMXG00000043842)	hal (ENSAMXG00000017914)	NOX5 (ENSAMXG00000017784)	glcea (ENSAMXG00000040569)	ambra1b (ENSAMXG00000017714)	mdkb (ENSAMXG00000042887)	DGKZ (ENSAMXG00000017700)	PHF21A (ENSAMXG00000017642)	PRDM11 (ENSAMXG00000017602)	ENSAMXG00000017557 ##29
Red-bellied piranha	MODERN SPECIES	122								ENSPNAG00000007703	ENSPNAG00000007693	ENSPNAG00000007682	ENSPNAG00000000396	ENSPNAG00000000392	ENSPNAG00000007663	ENSPNAG00000007656	saal1 (ENSPNAG00000007645) #21	tph1a (ENSPNAG00000007639) #22	SERGEF (ENSPNAG00000000372) #23	ENSPNAG00000007633	kcnc1b (ENSPNAG00000000367) #24	dhtkd1 (ENSPNAG00000000360)	camk1db (ENSPNAG00000000352)	ucmab (ENSPNAG00000007616)	hal (ENSPNAG00000007611)	NOX5 (ENSPNAG00000007601)	glcea (ENSPNAG00000000328)	ambra1b (ENSPNAG00000007590)	mdkb (ENSPNAG00000007574)	DGKZ (ENSPNAG00000000309)	PHF21A (ENSPNAG00000005288)	PRDM11 (ENSPNAG00000007519)	ENSPNAG00000000258
Electric eel	MODERN SPECIES	389														ENSEEEG00000011959	saal1 (ENSEEEG00000011958) #21	tph1a (ENSEEEG00000011930) #22	SERGEF (ENSEEEG00000011920) #23	kcnc1b (ENSEEEG00000011908) #24	dhtkd1 (ENSEEEG00000011748)	camk1db (ENSEEEG00000011517)	ENSEEEG00000011497	hal (ENSEEEG00000011496)	NOX5 (ENSEEEG00000011466)	glcea (ENSEEEG00000011465)	ambra1b (ENSEEEG00000011455)	mdkb (ENSEEEG00000011448)	DGKZ (ENSEEEG00000011154)	PHF21A (ENSEEEG00000011100)	PRDM11 (ENSEEEG00000011093)	ENSEEEG00000011091	ENSEEEG00000011089 ##29
Cyprinoidei	ANCESTRAL SPECIES	42	ENSGT00390000008679	ENSGT00940000175024	ENSGT00940000164760	ENSGT00940000157220.b	ENSGT01030000234638.b.b.c.a	ENSGT00940000159320	ENSGT00390000016718	ENSGT00950000182844.b.b.b.b	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000162219.w.a	ENSGT00940000163235.E	ENSGT00940000164871.b.e.b	ENSGT00940000164871.a.a	ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00950000183125.a	ENSGT00940000156776.d.b.a	ENSGT00390000011492.b	ENSGT00390000009047.b	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a ##29
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	383						ENSGT00940000175068.a.b	ENSGT00390000012559.i	ENSGT00390000008679.f	ENSGT00940000164760.d	ENSGT00940000157220.b.e	ENSGT01030000234638.b.b.c.a.c	ENSGT00940000159320.f	ENSGT00390000016718.a	ENSGT00950000182844.b.b.b.b.b	ENSGT00390000004737.b.b.d #21	ENSGT00950000182885.A.a.f.g #22	ENSGT00940000160684.c #23	ENSGT00940000156912.c.b.b #24	ENSGT00950000183125.a.d	ENSGT00940000156776.d.b.a.a	ENSGT00390000011492.b.b	ENSGT00390000009047.b.h	ENSGT00940000162591.a	ENSGT00390000006043.p.a.b	ENSGT00390000016223.p.a	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b.a	ENSGT00940000156124.c.b.b	ENSGT00940000159837.a	ENSGT00730000111696.b.a.b
Goldfish	MODERN SPECIES	45	prc1a (ENSCARG00000065909)	cat (ENSCARG00000065962)	ifitm5 (ENSCARG00000066137)	ENSCARG00000066146	ptdss2 (ENSCARG00000066158)	FCSK (ENSCARG00000066195)	ENSCARG00000066300	ENSCARG00000066303	rag1 (ENSCARG00000066310)	accs (ENSCARG00000066322)	furinb (ENSCARG00000066455)	MAN2A2 (ENSCARG00000066978)	ENSCARG00000067771	rhcgb (ENSCARG00000067821)	ENSCARG00000068192	tph1a (ENSCARG00000068432) #22	ENSCARG00000069039 #23	kcnc1b (ENSCARG00000069057) #24	dhtkd1 (ENSCARG00000069122)	ENSCARG00000069220	dkk3b (ENSCARG00000069222)	far1 (ENSCARG00000069236)	ENSCARG00000069270	PPFIBP2 (ENSCARG00000069340)	kdm7ab (ENSCARG00000069587)	cnot1 (ENSCARG00000069596)	cyp2x9 (ENSCARG00000069622)	e2f4 (ENSCARG00000069634)	ELMO3 (ENSCARG00000069640)	ENSCARG00000069646	ENSCARG00000069677
Cyprininae_a	ANCESTRAL SPECIES	415															ENSGT00390000004737.b.b.d #21	ENSGT00950000182885.A.a.f.g #22	ENSGT00940000160684.c #23	ENSGT00940000156912.c.b.b #24	ENSGT00950000183125.a.d	ENSGT00940000156776.d.b.a.a	ENSGT00390000011492.b.b	ENSGT00390000009047.b.h	ENSGT00940000162591.a	ENSGT00390000006043.p.a.b	ENSGT00390000016223.p.a	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b.a	ENSGT00940000156124.c.b.b	ENSGT00940000159837.a	ENSGT00730000111696.b.a.b
Common carp reference	MODERN SPECIES	33	ENSCCRG00000059039	lrrc4ca (ENSCCRG00000078006)	ENSCCRG00000044210	rag2 (ENSCCRG00000076758)	rag1 (ENSCCRG00000069358)	ENSCCRG00000068937	furinb (ENSCCRG00000013554)	ENSCCRG00000016706	unc45a (ENSCCRG00000070116)	gdpgp1 (ENSCCRG00000075359)	rhcgb (ENSCCRG00000016805)	ENSCCRG00000014299	ENSCCRG00000014311	ENSCCRG00000033570	saal1 (ENSCCRG00000033575) #21	tph1a (ENSCCRG00000033585) #22	SERGEF (ENSCCRG00000033672) #23	kcnc1b (ENSCCRG00000078528) #24	dhtkd1 (ENSCCRG00000033676)	camk1db (ENSCCRG00000061277)	ucmab (ENSCCRG00000041213)	glcea (ENSCCRG00000066932)	ambra1b (ENSCCRG00000011210)	ENSCCRG00000018816	ENSCCRG00000041626	ENSCCRG00000041675	ENSCCRG00000045873	ENSCCRG00000045869 ##29	ENSCCRG00000058016	ENSCCRG00000041590	ENSCCRG00000042840
Golden-line barbel	MODERN SPECIES	948			rag2 (ENSSGRG00000013498)	rag2 (ENSSGRG00000013497)	rag1 (ENSSGRG00000013496)	ENSSGRG00000013227	furinb (ENSSGRG00000013211)	MAN2A2 (ENSSGRG00000010115)	gdpgp1 (ENSSGRG00000010067)	rhcgb (ENSSGRG00000009970)	fanci (ENSSGRG00000009934)	ENSSGRG00000009927	ENSSGRG00000009926	ENSSGRG00000009925	saal1 (ENSSGRG00000009923) #21	tph1a (ENSSGRG00000008447) #22
Cyprininae	ANCESTRAL SPECIES	57	ENSGT00940000164760.c.a	ENSGT00940000157220.b.f	ENSGT01030000234638.b.b.c.a.d	ENSGT00940000159320.e	ENSGT00390000016718.b	ENSGT00950000182844.b.b.b.b.a	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000162219.w.a	ENSGT00940000163235.A.a.a.b	ENSGT01040000240558.b	ENSGT00940000162219.w.b	ENSGT00940000164871.b.e.a	ENSGT00940000164871.b.e.b.b	ENSGT00390000004737.b.b.c #21	ENSGT00950000182885.A.a.f.h #22	ENSGT00940000160684.d #23	ENSGT00940000156912.c.b.a #24	ENSGT00950000183125.a.c	ENSGT00940000156776.d.b.a.b	ENSGT00390000011492.b.a	ENSGT00390000009047.b.g	ENSGT00940000162591.b	ENSGT00390000006043.p.a.a	ENSGT00390000016223.p.b	ENSGT00940000156152.e.a.b.b	ENSGT00940000156124.c.b.a	ENSGT00940000159837.b	ENSGT00730000111696.b.a.a	ENSGT00990000203615.a.a.a.a.b ##29	ENSGT00940000160208.k.b
Goldfish	MODERN SPECIES	17	rhcgb (ENSCARG00000030420)	POLG (ENSCARG00000030223)	fanci (ENSCARG00000030142)	ENSCARG00000030103	ENSCARG00000030114	ENSCARG00000030090	ENSCARG00000030071	ENSCARG00000029995	ENSCARG00000029981	ENSCARG00000029971	ENSCARG00000029903	ENSCARG00000029826	ENSCARG00000029600	ENSCARG00000029569	saal1 (ENSCARG00000029506) #21	tph1a (ENSCARG00000024649) #22	kcnc1b (ENSCARG00000024455) #24	dhtkd1 (ENSCARG00000024195)	camk1db (ENSCARG00000024665)	ucmab (ENSCARG00000024642)	hal (ENSCARG00000023503)	NOX5 (ENSCARG00000023357)	glcea (ENSCARG00000023337)	ambra1b (ENSCARG00000023018)	ENSCARG00000023001	mdkb (ENSCARG00000022996)	DGKZ (ENSCARG00000021484)	PHF21A (ENSCARG00000021340)	PRDM11 (ENSCARG00000021320)	ENSCARG00000021314	ENSCARG00000021303 ##29
Cyprininae_a	ANCESTRAL SPECIES	106	ENSGT00940000164760.c.a	ENSGT00940000157220.b.f	ENSGT01030000234638.b.b.c.a.d	ENSGT00940000159320.e	ENSGT00390000016718.b	ENSGT00950000182844.b.b.b.b.a	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000162219.w.a	ENSGT00940000163235.E	ENSGT00940000164871.b.e.b.a	ENSGT00940000162219.w.b	ENSGT00940000164871.b.e.a	ENSGT00940000164871.b.e.b.b	ENSGT00390000004737.b.b.c #21	ENSGT00950000182885.A.a.f.h #22	ENSGT00940000160684.d #23	ENSGT00940000156912.c.b.a #24	ENSGT00950000183125.a.c	ENSGT00940000156776.d.b.a.b	ENSGT00390000011492.b.a	ENSGT00390000009047.b.g	ENSGT00940000162591.b	ENSGT00390000006043.p.a.a	ENSGT00390000016223.p.b	ENSGT00940000156152.e.a.b.b	ENSGT00940000156124.c.b.a	ENSGT00940000159837.b	ENSGT00730000111696.b.a.a	ENSGT00990000203615.a.a.a.a.b ##29	ENSGT00940000160208.k.b
Common carp reference	MODERN SPECIES	37	ENSCCRG00000056627	ENSCCRG00000012082	furinb (ENSCCRG00000013366)	ENSCCRG00000013612	unc45a (ENSCCRG00000076502)	rhcgb (ENSCCRG00000020422)	ENSCCRG00000001784	fanci (ENSCCRG00000027970)	ENSCCRG00000028000	ENSCCRG00000028010	ENSCCRG00000079784	ENSCCRG00000060778	ENSCCRG00000023938	ENSCCRG00000023953	saal1 (ENSCCRG00000052672) #21	tph1a (ENSCCRG00000033540) #22	SERGEF (ENSCCRG00000033550) #23	kcnc1b (ENSCCRG00000071017) #24	dhtkd1 (ENSCCRG00000005533)	camk1db (ENSCCRG00000011202)	ucmab (ENSCCRG00000056442)	hal (ENSCCRG00000059267)	ENSCCRG00000011188	ambra1b (ENSCCRG00000011080)	ENSCCRG00000081100	ENSCCRG00000014580	ENSCCRG00000014629	ENSCCRG00000045111	ENSCCRG00000045118 ##29	ENSCCRG00000061441	ENSCCRG00000074386
Golden-line barbel	MODERN SPECIES	705									ENSSGRG00000027140	ENSSGRG00000027141	ENSSGRG00000027143	ENSSGRG00000027147	ENSSGRG00000027150	ENSSGRG00000027159	saal1 (ENSSGRG00000027314) #21	tph1a (ENSSGRG00000027322) #22	kcnc1b (ENSSGRG00000027395) #24	dhtkd1 (ENSSGRG00000027399)	camk1db (ENSSGRG00000027643)	ucmab (ENSSGRG00000028992)	hal (ENSSGRG00000029009)	NOX5 (ENSSGRG00000029705)	glcea (ENSSGRG00000029716)	ambra1b (ENSSGRG00000029719)	ENSSGRG00000029721	mdkb (ENSSGRG00000029722)	DGKZ (ENSSGRG00000029768)	PHF21A (ENSSGRG00000031260)	PRDM11 (ENSSGRG00000031263)	ENSSGRG00000031264	ENSSGRG00000031265 ##29
Zebrafish	MODERN SPECIES	17	rag1 (ENSDARG00000052122)	ENSDARG00000097032	accs (ENSDARG00000052124)	furinb (ENSDARG00000070971)	MAN2A2 (ENSDARG00000063101)	unc45a (ENSDARG00000103643)	gdpgp1 (ENSDARG00000097155)	rhcgb (ENSDARG00000100265)	POLG (ENSDARG00000060951)	fanci (ENSDARG00000026224)	ENSDARG00000058556	ENSDARG00000070331	ENSDARG00000078994	ENSDARG00000100621	saal1 (ENSDARG00000018681) #21	tph1a (ENSDARG00000029432) #22	SERGEF (ENSDARG00000070986) #23	kcnc1b (ENSDARG00000032959) #24	dhtkd1 (ENSDARG00000016415)	camk1db (ENSDARG00000017446)	ucmab (ENSDARG00000005485)	hal (ENSDARG00000017444)	NOX5 (ENSDARG00000079773)	glcea (ENSDARG00000005095)	ambra1b (ENSDARG00000039878)	ENSDARG00000017722	mdkb (ENSDARG00000020708)	DGKZ (ENSDARG00000076025)	PHF21A (ENSDARG00000021378)	PRDM11 (ENSDARG00000074468)	ENSDARG00000089255
Clupeiformes	ANCESTRAL SPECIES	376															ENSGT00390000004737.b.b #21	ENSGT00950000182885.A.a.f #22	ENSGT00940000160684 #23	ENSGT00940000156912.c.b #24	ENSGT00940000158805.b	ENSGT00940000159515.c.a	ENSGT01090000259985.b.b.b.b	ENSGT00940000158300.e	ENSGT00940000155692.i	ENSGT00940000155891.c.a	ENSGT00390000005623	ENSGT00940000155755.a.a	ENSGT00940000167680
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	19	TLN2 (ENSCHAG00000013732)	c2cd4a (ENSCHAG00000017543)	ENSCHAG00000017551	roraa (ENSCHAG00000017595)	ICE2 (ENSCHAG00000018645)	anxa2a (ENSCHAG00000018668)	foxb1a (ENSCHAG00000018872)	nucb2a (ENSCHAG00000018892) #31	PIK3C2A (ENSCHAG00000019403) #33	ppp1r15b (ENSCHAG00000023682)	plekha7a (ENSCHAG00000023684) ##35	zgc:56106 (ENSCHAG00000023698) #36	vps72a (ENSCHAG00000023705)	ENSCHAG00000023709	saal1 (ENSCHAG00000023712) #21	tph1a (ENSCHAG00000023761) #22	SERGEF (ENSCHAG00000024321) #23	kcnc1b (ENSCHAG00000024332) #24	cd81b (ENSCHAG00000024344)	pkp3a (ENSCHAG00000024366)	sigirr (ENSCHAG00000024425)	ANO9 (ENSCHAG00000024433)	ANO5 (ENSCHAG00000024481)	SLC17A6 (ENSCHAG00000025027)	fancf (ENSCHAG00000025490)	GAS2 (ENSCHAG00000025493)	svip (ENSCHAG00000025501)	BEND7 (ENSCHAG00000025503)	sephs1 (ENSCHAG00000025516)	trabd (ENSCHAG00000025525)	selenoo1 (ENSCHAG00000025538)
Atlantic herring	MODERN SPECIES	12	ccdc88b (ENSCHAG00000013532)	macrod1 (ENSCHAG00000013552)	FLRT1 (ENSCHAG00000013583)	adam10a (ENSCHAG00000013634)	ENSCHAG00000015875	lipca (ENSCHAG00000015913)	aqp9b (ENSCHAG00000016470)	aldh1a2 (ENSCHAG00000016706)	polr2m (ENSCHAG00000020954)	MYZAP (ENSCHAG00000020964)	TCF12 (ENSCHAG00000021076)	ENSCHAG00000021215	ENSCHAG00000021220	mns1 (ENSCHAG00000021294)	ENSCHAG00000021310	TPH1 (ENSCHAG00000021362) #22	kcnc1a (ENSCHAG00000022454) #24	cd81a (ENSCHAG00000000536)	ENSCHAG00000000565	ENSCHAG00000001269	ENSCHAG00000003259	tssc4 (ENSCHAG00000003290)	kif7 (ENSCHAG00000003319)	ENSCHAG00000003796	mrps11 (ENSCHAG00000003809)	mrpl46 (ENSCHAG00000003817)	NTRK3 (ENSCHAG00000003845)	ENSCHAG00000004387	ENSCHAG00000004422	ENSCHAG00000004473	sv2ba (ENSCHAG00000004568)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	17	lipia (ENSDCDG00000034328)	ENSDCDG00000034331	SOX6 (ENSDCDG00000034338)	ENSDCDG00000034341	INSC (ENSDCDG00000034348)	calca (ENSDCDG00000034372)	psma1 (ENSDCDG00000034377)	ENSDCDG00000034383	gjd1a (ENSDCDG00000034384)	crx (ENSDCDG00000034386)	kptn (ENSDCDG00000034393)	PIK3C2A (ENSDCDG00000034448) #33	zgc:56106 (ENSDCDG00000034986) #36	ENSDCDG00000034997	saal1 (ENSDCDG00000035014) #21	tph1a (ENSDCDG00000035083) #22	kcnc1b (ENSDCDG00000035270) #24	cd81b (ENSDCDG00000035277)	pkp3a (ENSDCDG00000035285)	ANO5 (ENSDCDG00000035314)	svip (ENSDCDG00000035374)	ENSDCDG00000035377	ENSDCDG00000005636	tuba8l5 (ENSDCDG00000005648)	SPOP (ENSDCDG00000005661)	ANPEP (ENSDCDG00000005717)	anpepb.1 (ENSDCDG00000006568)	ap3s2 (ENSDCDG00000006921)	AEBP2 (ENSDCDG00000007081)	PDE3A (ENSDCDG00000007111)	SLCO1C1 (ENSDCDG00000007211)
Denticle herring	MODERN SPECIES	7	creb3l1 (ENSDCDG00000018414)	DGKZ (ENSDCDG00000018424)	ENSDCDG00000018957	mdka (ENSDCDG00000018964)	CHRM4 (ENSDCDG00000018968)	ambra1a (ENSDCDG00000018998)	acp2 (ENSDCDG00000019046)	acp2 (ENSDCDG00000019050)	SNX1 (ENSDCDG00000019061)	ENSDCDG00000019163	atosa (ENSDCDG00000019172)	CGNL1 (ENSDCDG00000019195)	ENSDCDG00000019213	ENSDCDG00000019238	mns1 (ENSDCDG00000019253)	TPH1 (ENSDCDG00000019305) #22	kcnc1a (ENSDCDG00000020959) #24	cd81a (ENSDCDG00000020963)	PKP3 (ENSDCDG00000020969)	ANO9 (ENSDCDG00000020976)	tssc4 (ENSDCDG00000020982)	kif7 (ENSDCDG00000020994)	mrps11 (ENSDCDG00000021014)	mrpl46 (ENSDCDG00000021015)	NTRK3 (ENSDCDG00000021018)	sv2ba (ENSDCDG00000021060)	mespba (ENSDCDG00000021065)	mespaa (ENSDCDG00000021068)	ANPEP (ENSDCDG00000021077)	igf1rb (ENSDCDG00000021396)	heatr3 (ENSDCDG00000026323)
Spotted gar	MODERN SPECIES	666	ENSLOCG00000007031	ENSLOCG00000007014	ENSLOCG00000007007	ENSLOCG00000006995	ENSLOCG00000006979	AP2A2 (ENSLOCG00000006959)	ENSLOCG00000006907	ENSLOCG00000006884	ENSLOCG00000006866	ENSLOCG00000006843	tollip (ENSLOCG00000006828)	ENSLOCG00000006819	hps5 (ENSLOCG00000006802)	saa (ENSLOCG00000006793) ##21	saal1 (ENSLOCG00000006776) #21	tph1a (ENSLOCG00000006755) #22	SERGEF (ENSLOCG00000006722) #23	kcnc1b (ENSLOCG00000006708) #24	cd81a (ENSLOCG00000006694)	ENSLOCG00000006681	SIGIRR (ENSLOCG00000006662)	ANO9 (ENSLOCG00000006642)	tssc4 (ENSLOCG00000017325)	ano5b (ENSLOCG00000006616)	ENSLOCG00000006592	slc17a6b (ENSLOCG00000006582)	GAS2 (ENSLOCG00000006569)	ENSLOCG00000006548	luzp2 (ENSLOCG00000006529)	ANO3 (ENSLOCG00000006513)	slc5a12 (ENSLOCG00000006496)
Elephant shark	MODERN SPECIES	1493	ddb1 (ENSCMIG00000011520)	cox6a2 (ENSCMIG00000011512)	ENSCMIG00000011509	ENSCMIG00000011503	TIGD4 (ENSCMIG00000011497)	ENSCMIG00000011492	ldha (ENSCMIG00000011394)	uevld (ENSCMIG00000011350)	gtf2h1 (ENSCMIG00000011322)	ENSCMIG00000011312	ENSCMIG00000011307	ENSCMIG00000011302	ENSCMIG00000011299	ENSCMIG00000011297	saal1 (ENSCMIG00000011294) #21	tph1a (ENSCMIG00000011275) #22	kcnc1b (ENSCMIG00000011259) #24	ENSCMIG00000011252	cd81a (ENSCMIG00000011243)	ANO9 (ENSCMIG00000011230)	TSSC4 (ENSCMIG00000011227)	slc22a18 (ENSCMIG00000011222)	nap1l4b (ENSCMIG00000011203)	cars1 (ENSCMIG00000010912)	ENSCMIG00000010755
Cyclostomata	ANCESTRAL SPECIES	219															ENSGT00390000017998.a	ENSGT00950000182885.A.a #22	ENSGT00940000156912.k.b #24
Lamprey	MODERN SPECIES	188												ENSPMAG00000008371	ENSPMAG00000008374	ENSPMAG00000008380	TMEM19 (ENSPMAG00000008390)	tph1b (ENSPMAG00000008400) #22	ENSPMAG00000008431
Hagfish	MODERN SPECIES	1521											fgf6b (ENSEBUG00000003423)	ENSEBUG00000007496	ENSEBUG00000005576	ENSEBUG00000013569	ENSEBUG00000001104	tph1a (ENSEBUG00000002168) #22	ENSEBUG00000014948 #24	ptgr2 (ENSEBUG00000016193)	ext2 (ENSEBUG00000011897)	ENSEBUG00000002891	ENSEBUG00000008755	ENSEBUG00000002921